Query 024286
Match_columns 269
No_of_seqs 131 out of 1815
Neff 10.9
Searched_HMMs 46136
Date Fri Mar 29 03:27:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024286.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024286hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 100.0 3.9E-39 8.6E-44 257.2 26.1 250 18-268 75-335 (336)
2 PRK10162 acetyl esterase; Prov 100.0 2.2E-36 4.7E-41 245.6 23.9 243 17-269 69-316 (318)
3 COG0657 Aes Esterase/lipase [L 100.0 2.3E-33 5E-38 228.2 25.1 243 17-267 64-309 (312)
4 PF07859 Abhydrolase_3: alpha/ 100.0 1.8E-33 3.8E-38 216.7 15.3 205 34-246 1-210 (211)
5 COG1506 DAP2 Dipeptidyl aminop 99.9 9.9E-26 2.1E-30 197.9 17.0 224 16-269 377-617 (620)
6 KOG1455 Lysophospholipase [Lip 99.9 1.3E-25 2.9E-30 172.2 14.6 226 20-268 43-312 (313)
7 PLN02385 hydrolase; alpha/beta 99.9 4.5E-23 9.7E-28 170.5 18.6 228 22-269 79-346 (349)
8 PLN02298 hydrolase, alpha/beta 99.9 2E-22 4.3E-27 165.6 21.9 233 21-269 49-318 (330)
9 PF00326 Peptidase_S9: Prolyl 99.9 1.7E-23 3.6E-28 161.3 14.6 188 52-269 3-210 (213)
10 PHA02857 monoglyceride lipase; 99.9 1.2E-22 2.6E-27 162.8 17.1 229 18-268 14-273 (276)
11 TIGR02821 fghA_ester_D S-formy 99.9 6.6E-22 1.4E-26 158.0 20.2 232 4-269 14-275 (275)
12 COG1647 Esterase/lipase [Gener 99.9 5.2E-23 1.1E-27 150.7 12.2 209 32-267 16-243 (243)
13 PRK10566 esterase; Provisional 99.9 3.6E-22 7.8E-27 157.7 17.3 208 22-269 17-249 (249)
14 PRK10749 lysophospholipase L2; 99.9 5.8E-22 1.3E-26 162.5 17.8 217 32-268 55-329 (330)
15 PLN02652 hydrolase; alpha/beta 99.9 3.7E-21 8E-26 160.0 20.4 227 19-269 125-388 (395)
16 PRK05077 frsA fermentation/res 99.9 6.5E-21 1.4E-25 159.7 19.3 219 19-269 183-413 (414)
17 PLN02442 S-formylglutathione h 99.9 1E-20 2.3E-25 151.4 18.5 222 12-267 27-279 (283)
18 PRK13604 luxD acyl transferase 99.9 1.6E-21 3.5E-26 153.8 13.2 200 19-246 24-246 (307)
19 PF10340 DUF2424: Protein of u 99.9 2E-20 4.3E-25 150.5 19.6 222 16-246 105-351 (374)
20 COG2267 PldB Lysophospholipase 99.9 2.4E-21 5.1E-26 155.3 14.2 221 32-268 35-294 (298)
21 PF01738 DLH: Dienelactone hyd 99.9 4.2E-21 9.1E-26 148.4 14.5 190 21-269 5-218 (218)
22 PRK00870 haloalkane dehalogena 99.8 1.4E-19 3.1E-24 146.8 18.4 100 31-145 46-150 (302)
23 PLN02824 hydrolase, alpha/beta 99.8 9.6E-20 2.1E-24 147.3 16.9 215 32-268 30-294 (294)
24 PRK11460 putative hydrolase; P 99.8 1.2E-19 2.5E-24 141.1 15.6 170 31-268 16-208 (232)
25 PLN02965 Probable pheophorbida 99.8 1E-18 2.3E-23 138.4 20.1 214 33-267 5-252 (255)
26 KOG1552 Predicted alpha/beta h 99.8 1.5E-19 3.2E-24 136.5 14.1 184 32-266 61-250 (258)
27 TIGR03056 bchO_mg_che_rel puta 99.8 5E-19 1.1E-23 141.8 18.1 227 17-266 14-278 (278)
28 TIGR03611 RutD pyrimidine util 99.8 1.2E-18 2.7E-23 137.7 19.5 213 32-267 14-257 (257)
29 PRK10673 acyl-CoA esterase; Pr 99.8 3.7E-19 8.1E-24 140.9 16.4 214 31-268 16-255 (255)
30 COG0412 Dienelactone hydrolase 99.8 8.9E-19 1.9E-23 135.7 17.8 192 18-269 15-234 (236)
31 PRK10115 protease 2; Provision 99.8 6.1E-19 1.3E-23 156.2 18.8 189 28-244 442-653 (686)
32 TIGR01840 esterase_phb esteras 99.8 7.4E-19 1.6E-23 135.2 16.4 114 20-145 2-130 (212)
33 PLN00021 chlorophyllase 99.8 2E-18 4.3E-23 139.1 19.1 192 15-248 37-244 (313)
34 TIGR02240 PHA_depoly_arom poly 99.8 7.1E-19 1.5E-23 141.0 16.4 213 32-268 26-266 (276)
35 PF02230 Abhydrolase_2: Phosph 99.8 9E-19 1.9E-23 135.1 14.9 114 102-269 101-216 (216)
36 TIGR03343 biphenyl_bphD 2-hydr 99.8 5E-18 1.1E-22 136.4 19.4 213 32-267 31-282 (282)
37 TIGR03100 hydr1_PEP hydrolase, 99.8 1.8E-18 3.9E-23 138.1 16.6 228 20-267 17-274 (274)
38 TIGR02427 protocat_pcaD 3-oxoa 99.8 2.9E-18 6.3E-23 134.8 16.6 212 32-266 14-251 (251)
39 PLN02679 hydrolase, alpha/beta 99.8 2.6E-18 5.7E-23 142.4 16.9 215 32-267 89-356 (360)
40 PRK10349 carboxylesterase BioH 99.8 9.1E-18 2E-22 133.1 18.4 211 32-266 14-254 (256)
41 PF12695 Abhydrolase_5: Alpha/ 99.8 3.2E-18 6.9E-23 123.8 14.5 145 33-244 1-145 (145)
42 TIGR03695 menH_SHCHC 2-succiny 99.8 2.9E-18 6.3E-23 134.6 15.1 212 32-266 2-251 (251)
43 PRK03592 haloalkane dehalogena 99.8 3E-18 6.4E-23 138.7 15.1 98 32-145 28-128 (295)
44 KOG2100 Dipeptidyl aminopeptid 99.8 3.2E-18 6.9E-23 152.2 16.4 219 19-268 512-747 (755)
45 PRK10985 putative hydrolase; P 99.8 4.4E-18 9.6E-23 139.2 15.8 107 30-147 57-170 (324)
46 PRK03204 haloalkane dehalogena 99.8 6.3E-18 1.4E-22 136.0 16.4 213 32-265 35-285 (286)
47 PLN02894 hydrolase, alpha/beta 99.8 1.1E-17 2.4E-22 140.2 18.5 98 31-145 105-211 (402)
48 TIGR01607 PST-A Plasmodium sub 99.8 2.8E-18 6.1E-23 140.5 14.2 209 53-267 64-332 (332)
49 TIGR01738 bioH putative pimelo 99.8 1.8E-17 3.9E-22 129.8 18.0 209 32-265 5-245 (245)
50 TIGR01250 pro_imino_pep_2 prol 99.8 3.4E-17 7.4E-22 131.5 19.5 101 32-146 26-132 (288)
51 KOG4388 Hormone-sensitive lipa 99.8 1.2E-17 2.6E-22 138.0 15.4 122 19-144 385-507 (880)
52 PLN02511 hydrolase 99.8 1E-17 2.2E-22 139.9 15.0 105 31-146 100-211 (388)
53 PLN03087 BODYGUARD 1 domain co 99.8 2.7E-17 5.8E-22 139.0 15.9 106 24-145 195-309 (481)
54 KOG4409 Predicted hydrolase/ac 99.8 2.3E-17 4.9E-22 129.6 14.0 108 29-147 88-197 (365)
55 COG0400 Predicted esterase [Ge 99.8 4.8E-17 1E-21 122.2 15.0 175 29-268 16-205 (207)
56 KOG4391 Predicted alpha/beta h 99.8 4E-18 8.7E-23 124.6 8.7 199 30-268 77-282 (300)
57 PRK14875 acetoin dehydrogenase 99.7 1.3E-16 2.7E-21 133.3 18.3 212 31-268 131-371 (371)
58 PRK11126 2-succinyl-6-hydroxy- 99.7 1.2E-16 2.6E-21 125.5 16.9 100 32-145 3-102 (242)
59 KOG2281 Dipeptidyl aminopeptid 99.7 3.8E-17 8.1E-22 136.5 14.2 221 19-268 628-867 (867)
60 TIGR03101 hydr2_PEP hydrolase, 99.7 5.4E-17 1.2E-21 127.5 14.5 233 18-264 12-264 (266)
61 KOG1454 Predicted hydrolase/ac 99.7 6.3E-17 1.4E-21 131.2 15.3 219 30-268 57-324 (326)
62 PLN02578 hydrolase 99.7 2.9E-16 6.2E-21 130.1 19.6 96 32-144 87-186 (354)
63 PRK06489 hypothetical protein; 99.7 1.9E-16 4.1E-21 131.5 18.4 99 31-144 69-188 (360)
64 KOG4178 Soluble epoxide hydrol 99.7 3.2E-16 6.9E-21 122.7 18.3 110 20-145 33-148 (322)
65 PLN03084 alpha/beta hydrolase 99.7 2.6E-16 5.6E-21 130.4 18.2 214 31-267 127-383 (383)
66 KOG4627 Kynurenine formamidase 99.7 8.9E-18 1.9E-22 121.7 7.9 193 12-244 51-247 (270)
67 PRK07581 hypothetical protein; 99.7 1.3E-16 2.9E-21 131.5 15.8 99 32-145 42-159 (339)
68 PLN02211 methyl indole-3-aceta 99.7 3.2E-15 6.9E-20 119.4 23.1 99 32-145 19-122 (273)
69 TIGR01836 PHA_synth_III_C poly 99.7 8.2E-16 1.8E-20 127.2 20.1 104 32-148 63-174 (350)
70 PRK11071 esterase YqiA; Provis 99.7 2.6E-16 5.5E-21 118.5 15.3 176 32-266 2-189 (190)
71 TIGR01249 pro_imino_pep_1 prol 99.7 8.8E-16 1.9E-20 124.8 18.0 99 32-146 28-131 (306)
72 PF12697 Abhydrolase_6: Alpha/ 99.7 1.3E-17 2.8E-22 129.0 6.8 98 34-147 1-103 (228)
73 COG2272 PnbA Carboxylesterase 99.7 1.8E-17 3.9E-22 136.0 7.5 128 14-146 77-218 (491)
74 PRK08775 homoserine O-acetyltr 99.7 6.8E-16 1.5E-20 127.4 14.7 86 51-146 84-174 (343)
75 COG0429 Predicted hydrolase of 99.7 1.6E-15 3.4E-20 118.7 15.4 231 19-268 64-340 (345)
76 KOG1838 Alpha/beta hydrolase [ 99.7 3.1E-15 6.8E-20 121.1 17.4 236 15-267 104-387 (409)
77 PF05448 AXE1: Acetyl xylan es 99.7 6.1E-17 1.3E-21 130.7 7.2 222 16-268 68-320 (320)
78 PF12740 Chlorophyllase2: Chlo 99.7 5.4E-15 1.2E-19 113.8 17.0 190 16-247 3-208 (259)
79 cd00312 Esterase_lipase Estera 99.7 2.4E-16 5.3E-21 136.3 9.5 128 13-146 75-214 (493)
80 PF00135 COesterase: Carboxyle 99.7 2.1E-16 4.6E-21 138.2 8.4 129 13-145 105-245 (535)
81 TIGR01392 homoserO_Ac_trn homo 99.6 4.1E-15 8.8E-20 123.2 14.3 102 32-146 32-163 (351)
82 COG2945 Predicted hydrolase of 99.6 2.5E-14 5.5E-19 103.1 15.9 181 22-266 20-205 (210)
83 PLN02980 2-oxoglutarate decarb 99.6 7E-15 1.5E-19 141.3 15.8 217 31-267 1371-1638(1655)
84 KOG3101 Esterase D [General fu 99.6 1E-14 2.2E-19 106.4 11.0 220 4-248 15-265 (283)
85 PRK00175 metX homoserine O-ace 99.6 2E-14 4.4E-19 120.0 14.0 62 203-268 310-374 (379)
86 KOG3043 Predicted hydrolase re 99.6 1.9E-14 4.2E-19 106.1 12.1 190 17-269 26-241 (242)
87 COG4099 Predicted peptidase [G 99.6 5.5E-15 1.2E-19 113.3 8.3 164 18-239 175-354 (387)
88 PLN02872 triacylglycerol lipas 99.6 5.6E-14 1.2E-18 116.8 14.7 105 31-147 74-199 (395)
89 PF06500 DUF1100: Alpha/beta h 99.6 7.2E-14 1.6E-18 114.1 14.2 221 17-268 177-409 (411)
90 KOG2112 Lysophospholipase [Lip 99.6 1.3E-13 2.7E-18 101.3 13.3 177 32-267 4-203 (206)
91 COG3458 Acetyl esterase (deace 99.6 5.8E-14 1.3E-18 106.5 11.3 205 15-245 67-301 (321)
92 KOG2382 Predicted alpha/beta h 99.6 5.3E-13 1.1E-17 104.9 17.0 219 30-268 51-313 (315)
93 PRK05855 short chain dehydroge 99.5 1E-13 2.2E-18 122.6 13.9 85 31-127 25-114 (582)
94 PF07224 Chlorophyllase: Chlor 99.5 4.8E-13 1E-17 101.2 14.6 128 12-148 28-160 (307)
95 PF10503 Esterase_phd: Esteras 99.5 4.5E-13 9.8E-18 101.9 14.5 107 30-146 15-133 (220)
96 KOG4667 Predicted esterase [Li 99.5 2.4E-13 5.3E-18 99.7 12.4 189 32-248 34-243 (269)
97 PRK10439 enterobactin/ferric e 99.5 1.6E-12 3.4E-17 108.8 17.6 188 17-246 194-393 (411)
98 PF05728 UPF0227: Uncharacteri 99.5 1.7E-12 3.7E-17 96.5 15.6 181 34-266 2-187 (187)
99 TIGR01838 PHA_synth_I poly(R)- 99.5 2.6E-12 5.7E-17 110.0 18.9 118 22-149 179-306 (532)
100 PF08840 BAAT_C: BAAT / Acyl-C 99.5 5E-14 1.1E-18 107.9 7.6 172 84-269 3-211 (213)
101 TIGR00976 /NonD putative hydro 99.5 9.9E-13 2.1E-17 115.0 16.2 120 17-147 9-134 (550)
102 KOG2564 Predicted acetyltransf 99.5 2.3E-13 4.9E-18 103.7 10.4 99 17-127 60-166 (343)
103 PRK05371 x-prolyl-dipeptidyl a 99.5 3.3E-12 7.2E-17 114.5 18.1 203 54-269 270-520 (767)
104 cd00707 Pancreat_lipase_like P 99.4 1.7E-12 3.8E-17 103.3 12.7 109 28-146 33-148 (275)
105 PF08538 DUF1749: Protein of u 99.4 1.1E-12 2.5E-17 102.9 10.0 226 32-266 34-303 (303)
106 KOG2984 Predicted hydrolase [G 99.4 4.9E-13 1.1E-17 97.1 6.6 220 21-268 33-276 (277)
107 PRK06765 homoserine O-acetyltr 99.4 8.3E-12 1.8E-16 103.9 14.4 62 203-268 324-388 (389)
108 PRK07868 acyl-CoA synthetase; 99.4 2.4E-11 5.2E-16 113.3 17.7 63 203-268 298-361 (994)
109 COG1505 Serine proteases of th 99.4 2.7E-12 5.8E-17 107.6 10.2 226 12-268 403-646 (648)
110 PF02129 Peptidase_S15: X-Pro 99.4 1.2E-13 2.7E-18 110.2 2.1 122 17-149 5-140 (272)
111 PF00756 Esterase: Putative es 99.4 5.6E-13 1.2E-17 105.4 5.6 204 17-264 8-250 (251)
112 KOG1516 Carboxylesterase and r 99.4 1.8E-12 3.9E-17 113.7 7.8 130 12-144 92-231 (545)
113 PF12715 Abhydrolase_7: Abhydr 99.3 5.2E-13 1.1E-17 107.4 3.7 119 18-145 102-260 (390)
114 COG3571 Predicted hydrolase of 99.3 2.2E-10 4.8E-15 80.4 16.1 180 32-267 15-210 (213)
115 COG3208 GrsT Predicted thioest 99.3 1.4E-10 3E-15 87.7 15.8 207 32-266 9-234 (244)
116 PF03583 LIP: Secretory lipase 99.3 7.8E-11 1.7E-15 94.5 15.1 208 53-269 16-282 (290)
117 TIGR03230 lipo_lipase lipoprot 99.3 2.2E-11 4.8E-16 101.6 12.1 107 29-145 39-154 (442)
118 COG0627 Predicted esterase [Ge 99.3 1.8E-11 3.9E-16 98.1 10.3 227 19-268 37-311 (316)
119 COG3509 LpqC Poly(3-hydroxybut 99.3 3.4E-10 7.3E-15 87.7 15.9 118 18-145 48-179 (312)
120 COG1770 PtrB Protease II [Amin 99.3 3.7E-10 8E-15 96.1 17.1 212 4-245 421-657 (682)
121 TIGR01839 PHA_synth_II poly(R) 99.3 2.5E-10 5.4E-15 97.2 16.2 115 22-149 206-332 (560)
122 PF06821 Ser_hydrolase: Serine 99.3 3.2E-10 6.9E-15 83.5 14.1 150 34-244 1-153 (171)
123 PF03403 PAF-AH_p_II: Platelet 99.2 9.3E-11 2E-15 97.2 11.3 107 29-146 98-263 (379)
124 PF00561 Abhydrolase_1: alpha/ 99.2 1.1E-11 2.3E-16 96.3 4.8 71 65-144 1-78 (230)
125 COG4188 Predicted dienelactone 99.2 2.1E-10 4.6E-15 91.9 10.9 117 3-127 39-179 (365)
126 COG0596 MhpC Predicted hydrola 99.2 1.1E-08 2.4E-13 80.4 19.2 100 32-146 22-124 (282)
127 KOG3847 Phospholipase A2 (plat 99.2 7.5E-10 1.6E-14 86.1 11.8 188 25-269 112-372 (399)
128 COG2382 Fes Enterochelin ester 99.2 3E-10 6.4E-15 88.5 9.7 191 18-248 83-284 (299)
129 KOG2237 Predicted serine prote 99.1 9.4E-10 2E-14 93.1 12.7 216 4-245 443-684 (712)
130 KOG4389 Acetylcholinesterase/B 99.1 8E-11 1.7E-15 96.6 5.9 139 5-147 109-257 (601)
131 PRK04940 hypothetical protein; 99.1 1.2E-08 2.6E-13 74.6 14.9 119 108-267 61-179 (180)
132 PF06057 VirJ: Bacterial virul 99.0 8.3E-09 1.8E-13 75.6 11.5 182 33-267 4-191 (192)
133 PF03959 FSH1: Serine hydrolas 99.0 2.4E-09 5.3E-14 82.2 8.2 114 84-246 83-203 (212)
134 PF06028 DUF915: Alpha/beta hy 99.0 9.3E-09 2E-13 80.3 10.8 198 32-266 12-253 (255)
135 PF09752 DUF2048: Uncharacteri 99.0 1.1E-07 2.4E-12 76.3 16.7 104 16-130 76-198 (348)
136 PF00151 Lipase: Lipase; Inte 98.9 1E-09 2.2E-14 89.3 4.7 111 28-145 68-187 (331)
137 PF06342 DUF1057: Alpha/beta h 98.9 1.6E-08 3.5E-13 78.2 10.5 98 32-145 36-137 (297)
138 TIGR03502 lipase_Pla1_cef extr 98.9 7.9E-09 1.7E-13 91.9 8.4 91 31-128 449-576 (792)
139 KOG2624 Triglyceride lipase-ch 98.9 1.7E-07 3.7E-12 77.7 15.4 109 29-148 71-202 (403)
140 PF07819 PGAP1: PGAP1-like pro 98.9 1.5E-08 3.3E-13 78.2 8.7 107 32-144 5-122 (225)
141 COG3243 PhaC Poly(3-hydroxyalk 98.8 5.5E-07 1.2E-11 73.6 15.3 86 53-147 129-219 (445)
142 COG2936 Predicted acyl esteras 98.8 1.4E-07 3.1E-12 80.4 12.1 122 16-147 31-161 (563)
143 COG3545 Predicted esterase of 98.7 9.7E-07 2.1E-11 63.5 13.6 174 32-266 3-177 (181)
144 PF00975 Thioesterase: Thioest 98.7 1.4E-07 3E-12 73.4 9.4 103 32-146 1-105 (229)
145 COG3150 Predicted esterase [Ge 98.7 2E-06 4.3E-11 61.2 13.9 121 108-266 60-187 (191)
146 TIGR01849 PHB_depoly_PhaZ poly 98.6 1.4E-06 3E-11 72.4 14.3 108 32-149 103-212 (406)
147 COG2819 Predicted hydrolase of 98.6 5.3E-06 1.2E-10 64.2 16.3 44 102-149 133-176 (264)
148 KOG2551 Phospholipase/carboxyh 98.6 3E-06 6.4E-11 63.4 13.1 106 110-267 107-219 (230)
149 PF05677 DUF818: Chlamydia CHL 98.6 2.6E-06 5.7E-11 67.9 13.3 93 32-127 138-235 (365)
150 PF12146 Hydrolase_4: Putative 98.5 9E-08 1.9E-12 60.8 3.8 42 32-79 17-58 (79)
151 PF10230 DUF2305: Uncharacteri 98.5 9.9E-07 2.1E-11 70.1 10.1 116 32-153 3-130 (266)
152 PF11144 DUF2920: Protein of u 98.5 7.8E-06 1.7E-10 67.1 15.1 111 27-146 32-220 (403)
153 COG4814 Uncharacterized protei 98.5 3.1E-05 6.8E-10 59.1 16.7 103 33-146 47-177 (288)
154 COG2021 MET2 Homoserine acetyl 98.5 1.6E-06 3.4E-11 69.9 10.4 102 29-143 49-180 (368)
155 PF05990 DUF900: Alpha/beta hy 98.5 1.7E-06 3.8E-11 67.2 10.2 105 32-147 19-139 (233)
156 PF02273 Acyl_transf_2: Acyl t 98.5 2E-07 4.3E-12 70.5 4.7 192 23-245 21-238 (294)
157 COG4757 Predicted alpha/beta h 98.5 3E-06 6.5E-11 63.7 10.5 68 52-126 46-124 (281)
158 PF11339 DUF3141: Protein of u 98.4 0.00012 2.6E-09 61.8 20.3 95 28-131 66-164 (581)
159 PF01674 Lipase_2: Lipase (cla 98.4 3.6E-07 7.8E-12 69.7 5.3 84 33-128 3-96 (219)
160 PF12048 DUF3530: Protein of u 98.4 5.7E-05 1.2E-09 61.3 17.8 193 18-268 74-309 (310)
161 PF07082 DUF1350: Protein of u 98.4 4.9E-05 1.1E-09 58.3 15.0 188 20-248 9-208 (250)
162 PLN02733 phosphatidylcholine-s 98.3 5.6E-06 1.2E-10 70.0 10.3 91 50-148 108-204 (440)
163 KOG3253 Predicted alpha/beta h 98.3 1.1E-05 2.4E-10 68.6 11.3 166 32-247 177-348 (784)
164 PF05057 DUF676: Putative seri 98.2 7.6E-06 1.6E-10 63.1 7.3 92 32-130 5-101 (217)
165 PF05577 Peptidase_S28: Serine 98.2 4.7E-06 1E-10 71.3 6.7 107 31-146 29-149 (434)
166 KOG3967 Uncharacterized conser 98.1 6.3E-05 1.4E-09 55.9 10.1 129 4-141 74-223 (297)
167 COG3319 Thioesterase domains o 98.1 3.1E-05 6.8E-10 60.6 9.1 102 32-146 1-104 (257)
168 PF05705 DUF829: Eukaryotic pr 98.1 0.0001 2.2E-09 57.8 12.0 60 203-265 179-240 (240)
169 KOG4840 Predicted hydrolases o 98.0 0.00023 5E-09 53.4 12.5 107 32-148 37-147 (299)
170 COG4782 Uncharacterized protei 98.0 5.8E-05 1.3E-09 60.8 8.5 106 32-148 117-237 (377)
171 PF03096 Ndr: Ndr family; Int 97.9 0.00018 3.9E-09 56.7 11.0 218 19-266 11-277 (283)
172 PF10142 PhoPQ_related: PhoPQ- 97.9 0.0012 2.7E-08 54.4 16.2 239 3-267 35-319 (367)
173 COG4947 Uncharacterized protei 97.9 3.6E-05 7.9E-10 55.1 6.2 131 87-246 87-217 (227)
174 KOG3724 Negative regulator of 97.8 4.4E-05 9.6E-10 67.1 6.4 77 65-142 133-217 (973)
175 PTZ00472 serine carboxypeptida 97.8 0.00026 5.5E-09 60.9 11.0 121 20-150 66-221 (462)
176 PRK10252 entF enterobactin syn 97.8 0.00016 3.5E-09 70.4 10.6 100 32-144 1069-1170(1296)
177 PF02450 LCAT: Lecithin:choles 97.8 8E-05 1.7E-09 62.6 6.9 88 51-147 66-162 (389)
178 COG1073 Hydrolases of the alph 97.7 0.00024 5.2E-09 57.2 8.6 64 203-269 233-298 (299)
179 COG3946 VirJ Type IV secretory 97.6 0.00095 2.1E-08 54.7 10.8 77 32-121 261-340 (456)
180 KOG1553 Predicted alpha/beta h 97.6 0.00039 8.5E-09 55.7 7.7 75 64-146 268-346 (517)
181 COG1075 LipA Predicted acetylt 97.6 0.00023 5E-09 58.6 6.8 104 32-147 60-166 (336)
182 KOG2931 Differentiation-relate 97.5 0.021 4.5E-07 45.2 16.4 117 19-146 34-158 (326)
183 PF01764 Lipase_3: Lipase (cla 97.4 0.00044 9.4E-09 49.3 5.9 40 105-145 63-106 (140)
184 TIGR03712 acc_sec_asp2 accesso 97.4 0.01 2.2E-07 50.2 14.2 117 19-151 278-396 (511)
185 PF11288 DUF3089: Protein of u 97.4 0.00045 9.8E-09 52.0 5.5 60 64-128 45-116 (207)
186 KOG2183 Prolylcarboxypeptidase 97.3 0.0006 1.3E-08 56.0 5.4 90 54-149 101-207 (492)
187 cd00741 Lipase Lipase. Lipase 97.2 0.0011 2.4E-08 48.0 6.4 41 104-145 26-67 (153)
188 KOG2541 Palmitoyl protein thio 97.2 0.0052 1.1E-07 47.7 9.7 100 33-142 25-125 (296)
189 smart00824 PKS_TE Thioesterase 97.2 0.0054 1.2E-07 46.5 9.8 85 52-144 15-101 (212)
190 PLN02517 phosphatidylcholine-s 97.1 0.0018 3.8E-08 56.2 6.9 87 52-145 158-263 (642)
191 PF11187 DUF2974: Protein of u 97.1 0.0013 2.7E-08 50.8 5.3 54 86-143 67-121 (224)
192 cd00519 Lipase_3 Lipase (class 97.1 0.0016 3.5E-08 50.7 5.9 38 108-145 129-168 (229)
193 KOG3975 Uncharacterized conser 97.0 0.021 4.5E-07 44.1 11.2 104 31-145 29-147 (301)
194 PF01083 Cutinase: Cutinase; 97.0 0.0045 9.8E-08 46.1 7.3 103 33-143 7-120 (179)
195 PLN02454 triacylglycerol lipas 96.8 0.0034 7.3E-08 52.4 6.1 56 86-145 211-271 (414)
196 PF00450 Peptidase_S10: Serine 96.7 0.0054 1.2E-07 52.2 7.2 62 85-147 114-183 (415)
197 PF08386 Abhydrolase_4: TAP-li 96.7 0.0076 1.7E-07 40.4 6.3 60 202-267 34-93 (103)
198 PLN02606 palmitoyl-protein thi 96.7 0.027 5.9E-07 45.1 9.9 105 32-145 27-132 (306)
199 PLN03016 sinapoylglucose-malat 96.6 0.03 6.6E-07 47.8 10.4 45 103-148 162-213 (433)
200 PLN02209 serine carboxypeptida 96.5 0.012 2.5E-07 50.3 7.5 63 85-148 145-215 (437)
201 PF07519 Tannase: Tannase and 96.5 0.024 5.2E-07 49.1 9.2 121 14-146 14-151 (474)
202 KOG1282 Serine carboxypeptidas 96.4 0.027 5.9E-07 48.0 8.9 56 90-149 155-217 (454)
203 PLN02633 palmitoyl protein thi 96.3 0.065 1.4E-06 43.0 10.0 103 33-144 27-130 (314)
204 PLN02571 triacylglycerol lipas 95.8 0.024 5.2E-07 47.5 5.9 22 108-129 227-248 (413)
205 PLN02408 phospholipase A1 95.8 0.017 3.6E-07 47.7 4.8 23 108-130 201-223 (365)
206 KOG2369 Lecithin:cholesterol a 95.8 0.022 4.8E-07 48.0 5.4 73 51-130 125-205 (473)
207 PLN00413 triacylglycerol lipas 95.7 0.018 3.9E-07 48.9 4.8 36 86-127 269-304 (479)
208 PLN02324 triacylglycerol lipas 95.5 0.025 5.4E-07 47.3 4.8 21 108-128 216-236 (415)
209 KOG2565 Predicted hydrolases o 95.5 0.1 2.2E-06 42.9 7.9 96 32-141 153-260 (469)
210 PF02089 Palm_thioest: Palmito 95.4 0.035 7.6E-07 44.0 5.2 104 32-144 6-115 (279)
211 PLN02162 triacylglycerol lipas 95.4 0.027 5.8E-07 47.7 4.8 20 108-127 279-298 (475)
212 KOG2182 Hydrolytic enzymes of 95.3 0.13 2.7E-06 43.9 8.4 107 30-144 85-206 (514)
213 PLN02934 triacylglycerol lipas 95.2 0.033 7.1E-07 47.7 4.8 36 87-128 307-342 (515)
214 PLN02310 triacylglycerol lipas 95.2 0.028 6E-07 47.0 4.2 22 108-129 210-231 (405)
215 PLN02802 triacylglycerol lipas 95.2 0.035 7.5E-07 47.6 4.8 23 108-130 331-353 (509)
216 PLN02761 lipase class 3 family 95.1 0.042 9E-07 47.2 5.0 21 108-128 295-315 (527)
217 PLN02753 triacylglycerol lipas 95.1 0.042 9.1E-07 47.3 5.0 22 108-129 313-334 (531)
218 PLN03037 lipase class 3 family 95.1 0.047 1E-06 46.9 5.2 23 108-130 319-341 (525)
219 PLN02719 triacylglycerol lipas 94.8 0.052 1.1E-06 46.6 4.9 23 108-130 299-321 (518)
220 COG2939 Carboxypeptidase C (ca 94.8 0.3 6.4E-06 41.9 9.1 66 82-148 174-239 (498)
221 PF07519 Tannase: Tannase and 94.6 0.077 1.7E-06 46.0 5.4 62 204-267 355-426 (474)
222 PF08237 PE-PPE: PE-PPE domain 93.6 0.33 7.1E-06 37.6 6.7 63 64-130 2-71 (225)
223 PLN02847 triacylglycerol lipas 93.6 0.13 2.8E-06 45.0 4.8 22 108-129 252-273 (633)
224 KOG1551 Uncharacterized conser 93.4 0.99 2.1E-05 35.5 8.8 24 104-128 193-216 (371)
225 KOG4569 Predicted lipase [Lipi 93.2 0.26 5.7E-06 40.7 5.9 41 86-132 156-196 (336)
226 KOG4540 Putative lipase essent 91.6 0.38 8.1E-06 38.1 4.6 21 108-128 277-297 (425)
227 COG5153 CVT17 Putative lipase 91.6 0.38 8.1E-06 38.1 4.6 21 108-128 277-297 (425)
228 PF10081 Abhydrolase_9: Alpha/ 90.6 1.5 3.3E-05 34.8 7.1 103 37-145 40-147 (289)
229 PLN02213 sinapoylglucose-malat 90.3 1.7 3.8E-05 35.7 7.7 46 103-149 48-100 (319)
230 PF04301 DUF452: Protein of un 89.9 1.7 3.7E-05 33.3 6.7 32 108-144 58-89 (213)
231 COG3673 Uncharacterized conser 89.8 9.7 0.00021 31.1 10.9 91 32-127 32-142 (423)
232 PF06259 Abhydrolase_8: Alpha/ 89.5 1.1 2.5E-05 33.2 5.4 49 85-141 92-140 (177)
233 KOG2521 Uncharacterized conser 89.3 12 0.00025 31.2 14.0 62 204-268 227-290 (350)
234 KOG4372 Predicted alpha/beta h 88.9 0.89 1.9E-05 38.0 4.8 84 32-126 81-169 (405)
235 PF06850 PHB_depo_C: PHB de-po 88.8 0.88 1.9E-05 34.1 4.3 66 202-268 134-202 (202)
236 KOG2029 Uncharacterized conser 88.0 1.8 3.8E-05 38.1 6.2 61 64-128 478-547 (697)
237 PF03283 PAE: Pectinacetyleste 86.7 1.7 3.7E-05 36.3 5.4 60 84-147 137-199 (361)
238 PF12242 Eno-Rase_NADH_b: NAD( 84.9 3.7 8E-05 25.6 4.8 41 85-128 21-61 (78)
239 PF09994 DUF2235: Uncharacteri 84.6 1.9 4.1E-05 34.7 4.6 40 84-128 74-113 (277)
240 PF12146 Hydrolase_4: Putative 81.6 5.4 0.00012 25.1 4.9 60 204-266 18-79 (79)
241 PF04083 Abhydro_lipase: Parti 79.9 2.3 5E-05 25.5 2.6 12 28-39 40-51 (63)
242 PF05277 DUF726: Protein of un 79.6 4.7 0.0001 33.5 5.2 41 104-145 218-260 (345)
243 COG0529 CysC Adenylylsulfate k 79.3 4.6 0.0001 29.9 4.4 37 31-71 22-58 (197)
244 PF10605 3HBOH: 3HB-oligomer h 79.2 6.6 0.00014 34.9 6.1 63 204-267 557-636 (690)
245 KOG1202 Animal-type fatty acid 78.0 16 0.00034 35.7 8.3 93 32-143 2124-2217(2376)
246 COG0541 Ffh Signal recognition 77.4 37 0.00081 29.2 9.7 106 30-141 98-247 (451)
247 PF10686 DUF2493: Protein of u 71.9 7.8 0.00017 23.9 3.5 32 32-70 32-63 (71)
248 TIGR02690 resist_ArsH arsenica 70.7 17 0.00036 28.2 5.8 33 86-120 108-141 (219)
249 COG4287 PqaA PhoPQ-activated p 66.5 37 0.00081 28.5 7.2 110 15-127 108-254 (507)
250 COG4553 DepA Poly-beta-hydroxy 65.4 74 0.0016 25.9 14.0 64 204-268 341-407 (415)
251 KOG4127 Renal dipeptidase [Pos 65.3 26 0.00057 29.1 6.1 80 32-118 267-346 (419)
252 PF12122 DUF3582: Protein of u 63.7 41 0.00089 22.4 6.6 48 218-267 12-60 (101)
253 PF06500 DUF1100: Alpha/beta h 63.0 6.8 0.00015 33.3 2.6 64 203-267 190-254 (411)
254 PF01583 APS_kinase: Adenylyls 58.1 51 0.0011 24.0 6.1 36 32-71 2-37 (156)
255 COG0431 Predicted flavoprotein 56.3 37 0.0008 25.4 5.4 64 52-127 58-121 (184)
256 KOG2872 Uroporphyrinogen decar 54.8 28 0.00061 28.0 4.5 32 30-74 251-282 (359)
257 cd07212 Pat_PNPLA9 Patatin-lik 53.5 11 0.00023 31.0 2.2 18 110-127 35-52 (312)
258 PRK10279 hypothetical protein; 53.4 19 0.00041 29.4 3.6 20 108-127 34-53 (300)
259 PF05576 Peptidase_S37: PS-10 53.2 17 0.00038 30.9 3.4 98 30-145 62-169 (448)
260 cd07225 Pat_PNPLA6_PNPLA7 Pata 52.7 20 0.00043 29.3 3.7 32 89-127 32-63 (306)
261 PTZ00472 serine carboxypeptida 52.4 29 0.00063 30.3 4.8 61 203-267 365-458 (462)
262 COG4425 Predicted membrane pro 52.1 41 0.00089 29.0 5.3 80 33-122 324-412 (588)
263 cd07224 Pat_like Patatin-like 51.1 22 0.00048 27.8 3.6 34 90-128 17-50 (233)
264 cd07227 Pat_Fungal_NTE1 Fungal 49.7 24 0.00052 28.3 3.6 31 90-127 28-58 (269)
265 PLN02213 sinapoylglucose-malat 49.4 49 0.0011 27.3 5.5 60 203-267 234-316 (319)
266 KOG1283 Serine carboxypeptidas 48.9 43 0.00094 27.6 4.8 46 103-149 119-170 (414)
267 cd07207 Pat_ExoU_VipD_like Exo 47.6 25 0.00054 26.3 3.3 20 109-128 29-48 (194)
268 cd07198 Patatin Patatin-like p 47.4 26 0.00056 25.7 3.3 32 90-128 16-47 (172)
269 PF05576 Peptidase_S37: PS-10 47.0 28 0.0006 29.7 3.6 60 202-265 351-411 (448)
270 PF05673 DUF815: Protein of un 46.6 75 0.0016 25.1 5.7 53 33-98 53-105 (249)
271 KOG1282 Serine carboxypeptidas 45.8 48 0.0011 28.8 5.0 61 203-267 364-447 (454)
272 cd07230 Pat_TGL4-5_like Triacy 44.9 24 0.00052 30.4 3.1 34 89-129 90-123 (421)
273 cd07210 Pat_hypo_W_succinogene 44.9 34 0.00074 26.5 3.7 21 108-128 29-49 (221)
274 PRK10673 acyl-CoA esterase; Pr 44.2 90 0.0019 24.1 6.2 61 202-266 16-76 (255)
275 PLN02209 serine carboxypeptida 44.1 70 0.0015 27.8 5.8 61 203-268 352-435 (437)
276 cd07211 Pat_PNPLA8 Patatin-lik 43.8 17 0.00038 29.6 2.1 17 110-126 44-60 (308)
277 PLN03016 sinapoylglucose-malat 43.7 60 0.0013 28.2 5.3 61 203-268 348-431 (433)
278 cd07205 Pat_PNPLA6_PNPLA7_NTE1 43.4 36 0.00079 24.9 3.6 33 89-128 17-49 (175)
279 PF06309 Torsin: Torsin; Inte 43.2 44 0.00096 23.3 3.6 12 27-39 49-60 (127)
280 KOG1532 GTPase XAB1, interacts 42.9 1.8E+02 0.004 23.6 7.9 40 88-127 103-145 (366)
281 PF00450 Peptidase_S10: Serine 42.5 17 0.00037 30.9 1.9 60 203-266 331-414 (415)
282 TIGR00632 vsr DNA mismatch end 41.4 64 0.0014 22.2 4.1 13 31-43 56-68 (117)
283 PF13207 AAA_17: AAA domain; P 41.0 28 0.0006 23.5 2.5 32 34-72 1-32 (121)
284 PLN02748 tRNA dimethylallyltra 40.9 98 0.0021 27.2 6.1 33 32-71 22-54 (468)
285 COG5045 Ribosomal protein S10E 40.2 36 0.00079 21.9 2.6 58 53-117 9-66 (105)
286 PF00004 AAA: ATPase family as 40.1 57 0.0012 22.1 4.0 55 35-96 1-55 (132)
287 cd07218 Pat_iPLA2 Calcium-inde 39.7 44 0.00095 26.4 3.6 18 111-128 34-51 (245)
288 cd07228 Pat_NTE_like_bacteria 39.5 23 0.0005 26.1 2.0 21 108-128 29-49 (175)
289 cd07217 Pat17_PNPLA8_PNPLA9_li 39.1 23 0.00051 29.5 2.1 18 110-127 44-61 (344)
290 PLN02385 hydrolase; alpha/beta 38.7 1.2E+02 0.0027 25.1 6.4 62 203-266 88-151 (349)
291 TIGR01250 pro_imino_pep_2 prol 38.1 1.5E+02 0.0034 22.9 6.8 62 203-266 26-91 (288)
292 cd07232 Pat_PLPL Patain-like p 37.4 38 0.00081 29.1 3.1 34 89-129 84-117 (407)
293 cd07216 Pat17_PNPLA8_PNPLA9_li 36.9 22 0.00047 29.1 1.6 17 110-126 45-61 (309)
294 COG3340 PepE Peptidase E [Amin 36.6 50 0.0011 25.4 3.3 41 31-75 32-73 (224)
295 PF10605 3HBOH: 3HB-oligomer h 36.4 3.4E+02 0.0074 24.9 9.0 40 108-149 286-325 (690)
296 cd07213 Pat17_PNPLA8_PNPLA9_li 36.0 29 0.00063 28.1 2.2 19 110-128 37-55 (288)
297 KOG1455 Lysophospholipase [Lip 35.4 2E+02 0.0044 23.6 6.6 64 204-267 56-119 (313)
298 COG0324 MiaA tRNA delta(2)-iso 35.3 1.1E+02 0.0024 25.2 5.3 33 32-71 3-35 (308)
299 cd07209 Pat_hypo_Ecoli_Z1214_l 35.1 30 0.00064 26.6 2.0 32 90-128 16-47 (215)
300 PF01734 Patatin: Patatin-like 34.3 35 0.00075 25.0 2.3 20 108-127 28-47 (204)
301 cd07214 Pat17_isozyme_like Pat 34.0 29 0.00063 29.0 2.0 17 110-126 46-62 (349)
302 PF13478 XdhC_C: XdhC Rossmann 33.9 79 0.0017 22.3 3.9 21 53-73 10-30 (136)
303 PRK11126 2-succinyl-6-hydroxy- 33.8 1.6E+02 0.0034 22.5 6.1 60 203-267 3-62 (242)
304 cd07208 Pat_hypo_Ecoli_yjju_li 33.8 34 0.00073 27.2 2.2 19 110-128 30-48 (266)
305 PLN02200 adenylate kinase fami 33.5 90 0.0019 24.4 4.5 45 19-70 29-74 (234)
306 PF05577 Peptidase_S28: Serine 33.5 54 0.0012 28.3 3.6 54 203-261 377-430 (434)
307 cd07199 Pat17_PNPLA8_PNPLA9_li 33.0 30 0.00066 27.4 1.8 18 110-127 37-54 (258)
308 COG1752 RssA Predicted esteras 32.9 61 0.0013 26.5 3.6 21 108-128 40-60 (306)
309 TIGR03709 PPK2_rel_1 polyphosp 32.9 68 0.0015 25.7 3.7 39 30-72 54-92 (264)
310 PRK13703 conjugal pilus assemb 32.7 1.3E+02 0.0028 23.9 5.1 51 33-87 146-196 (248)
311 TIGR02193 heptsyl_trn_I lipopo 32.6 2.7E+02 0.0059 22.6 8.4 37 31-70 179-217 (319)
312 COG4635 HemG Flavodoxin [Energ 32.5 1.9E+02 0.0041 21.3 5.5 65 204-268 2-73 (175)
313 KOG2214 Predicted esterase of 31.7 18 0.00039 31.5 0.4 24 108-131 203-226 (543)
314 PF14253 AbiH: Bacteriophage a 31.7 29 0.00062 27.6 1.5 15 104-119 233-247 (270)
315 cd07215 Pat17_PNPLA8_PNPLA9_li 31.5 35 0.00075 28.3 2.0 17 110-126 43-59 (329)
316 COG3007 Uncharacterized paraqu 31.3 1.1E+02 0.0023 25.0 4.4 43 85-129 22-64 (398)
317 cd07229 Pat_TGL3_like Triacylg 30.7 52 0.0011 28.0 2.9 34 90-130 101-134 (391)
318 PRK10964 ADP-heptose:LPS hepto 30.6 3E+02 0.0065 22.5 9.2 35 32-69 179-215 (322)
319 COG3101 Uncharacterized protei 30.5 41 0.0009 23.8 1.9 20 20-39 31-50 (180)
320 KOG1252 Cystathionine beta-syn 30.4 1.8E+02 0.0039 24.3 5.7 20 108-127 304-325 (362)
321 COG2267 PldB Lysophospholipase 29.9 1.5E+02 0.0032 24.2 5.4 61 204-267 36-99 (298)
322 KOG2385 Uncharacterized conser 29.4 1.6E+02 0.0036 26.1 5.5 40 104-144 445-486 (633)
323 cd00382 beta_CA Carbonic anhyd 29.1 87 0.0019 21.5 3.4 32 84-121 42-73 (119)
324 PLN02840 tRNA dimethylallyltra 28.8 1.8E+02 0.004 25.1 5.8 33 32-71 21-53 (421)
325 TIGR02240 PHA_depoly_arom poly 28.6 2.8E+02 0.006 21.8 6.8 60 203-266 26-86 (276)
326 PLN02652 hydrolase; alpha/beta 28.4 1.5E+02 0.0033 25.3 5.3 61 203-266 137-199 (395)
327 TIGR01738 bioH putative pimelo 28.1 2.6E+02 0.0055 20.9 6.4 59 203-265 5-63 (245)
328 PF01075 Glyco_transf_9: Glyco 28.0 98 0.0021 24.0 4.0 39 31-70 105-143 (247)
329 cd03789 GT1_LPS_heptosyltransf 28.0 3.1E+02 0.0067 21.8 8.6 39 32-71 122-160 (279)
330 PF00698 Acyl_transf_1: Acyl t 27.8 61 0.0013 26.6 2.8 53 204-267 157-209 (318)
331 PF14714 KH_dom-like: KH-domai 27.5 1.7E+02 0.0036 18.5 4.5 35 202-236 38-78 (80)
332 COG1087 GalE UDP-glucose 4-epi 27.4 63 0.0014 26.4 2.7 94 35-142 3-117 (329)
333 PLN02211 methyl indole-3-aceta 27.3 2.7E+02 0.0057 22.2 6.4 63 202-267 18-82 (273)
334 PRK05282 (alpha)-aspartyl dipe 27.0 2.6E+02 0.0057 21.9 6.0 17 108-124 113-129 (233)
335 KOG2182 Hydrolytic enzymes of 27.0 95 0.0021 27.3 3.8 42 203-249 434-475 (514)
336 COG4075 Uncharacterized conser 26.8 1.9E+02 0.0042 19.0 4.9 54 52-114 16-72 (110)
337 COG2830 Uncharacterized protei 26.7 43 0.00092 24.5 1.5 31 108-143 58-88 (214)
338 TIGR02739 TraF type-F conjugat 26.3 2.6E+02 0.0055 22.4 5.9 36 51-86 167-202 (256)
339 smart00827 PKS_AT Acyl transfe 26.2 1E+02 0.0022 24.8 3.9 19 108-126 83-101 (298)
340 TIGR00128 fabD malonyl CoA-acy 26.1 1E+02 0.0023 24.6 3.9 19 108-126 84-102 (290)
341 TIGR02884 spore_pdaA delta-lac 25.9 99 0.0021 23.9 3.6 34 32-70 187-220 (224)
342 COG0505 CarA Carbamoylphosphat 25.9 2.2E+02 0.0049 23.9 5.5 61 53-121 191-263 (368)
343 COG1820 NagA N-acetylglucosami 25.7 2.3E+02 0.0051 24.1 5.7 55 35-97 57-113 (380)
344 PRK00870 haloalkane dehalogena 25.5 2.7E+02 0.0059 22.3 6.3 62 203-267 47-111 (302)
345 TIGR02578 cas_TM1811_Csm1 CRIS 25.4 1.3E+02 0.0027 27.8 4.5 43 226-268 290-334 (648)
346 cd07231 Pat_SDP1-like Sugar-De 25.0 76 0.0016 26.2 2.8 20 109-128 98-117 (323)
347 TIGR03131 malonate_mdcH malona 25.0 1.2E+02 0.0025 24.5 4.0 19 108-126 77-95 (295)
348 PF10230 DUF2305: Uncharacteri 24.9 98 0.0021 24.7 3.4 42 203-245 222-265 (266)
349 PRK03592 haloalkane dehalogena 24.8 3.3E+02 0.0072 21.6 6.6 60 203-266 28-88 (295)
350 PRK12467 peptide synthase; Pro 24.8 4.8E+02 0.01 30.4 9.3 91 32-138 3693-3788(3956)
351 cd00883 beta_CA_cladeA Carboni 24.8 1.3E+02 0.0028 22.4 3.9 34 85-124 65-98 (182)
352 cd07204 Pat_PNPLA_like Patatin 24.6 61 0.0013 25.5 2.2 19 110-128 34-52 (243)
353 PRK13869 plasmid-partitioning 24.5 1.6E+02 0.0035 25.2 4.8 29 46-75 133-161 (405)
354 PLN02824 hydrolase, alpha/beta 23.6 2.3E+02 0.0049 22.6 5.4 61 203-267 30-98 (294)
355 TIGR03100 hydr1_PEP hydrolase, 23.1 2.9E+02 0.0063 21.9 5.9 41 203-245 27-70 (274)
356 PRK15000 peroxidase; Provision 23.0 1.7E+02 0.0038 22.1 4.3 39 32-71 36-75 (200)
357 COG4822 CbiK Cobalamin biosynt 23.0 3.7E+02 0.008 20.9 6.7 53 32-98 139-192 (265)
358 PF09587 PGA_cap: Bacterial ca 23.0 1.4E+02 0.0031 23.5 4.0 38 32-71 186-223 (250)
359 PRK10907 intramembrane serine 22.9 3.1E+02 0.0068 22.2 5.9 47 218-267 12-58 (276)
360 PLN02606 palmitoyl-protein thi 22.5 2.5E+02 0.0055 23.1 5.3 35 204-238 28-64 (306)
361 cd07222 Pat_PNPLA4 Patatin-lik 22.4 70 0.0015 25.2 2.1 17 110-126 34-50 (246)
362 KOG3975 Uncharacterized conser 22.3 2.8E+02 0.0061 22.2 5.2 56 203-265 243-300 (301)
363 cd01520 RHOD_YbbB Member of th 22.3 1.7E+02 0.0037 20.1 3.9 34 29-71 85-118 (128)
364 KOG0635 Adenosine 5'-phosphosu 22.2 2.4E+02 0.0052 20.6 4.5 36 32-71 31-66 (207)
365 TIGR03607 patatin-related prot 22.0 62 0.0014 30.1 2.0 18 109-126 68-85 (739)
366 cd01819 Patatin_and_cPLA2 Pata 22.0 75 0.0016 22.9 2.1 18 108-125 29-46 (155)
367 TIGR02764 spore_ybaN_pdaB poly 21.6 72 0.0016 23.8 2.0 17 53-70 171-187 (191)
368 cd07206 Pat_TGL3-4-5_SDP1 Tria 21.4 1.3E+02 0.0027 24.7 3.4 19 110-128 100-118 (298)
369 KOG1201 Hydroxysteroid 17-beta 21.2 1.2E+02 0.0026 24.7 3.2 34 32-73 38-71 (300)
370 KOG4150 Predicted ATP-dependen 21.1 1.7E+02 0.0037 26.5 4.2 43 203-245 899-944 (1034)
371 PF03575 Peptidase_S51: Peptid 21.0 75 0.0016 22.8 1.9 13 108-120 69-81 (154)
372 PRK08118 topology modulation p 20.8 3.4E+02 0.0074 19.7 6.8 33 35-74 4-36 (167)
373 PRK10382 alkyl hydroperoxide r 20.8 2.1E+02 0.0045 21.5 4.3 39 32-71 33-72 (187)
374 COG0331 FabD (acyl-carrier-pro 20.8 1.3E+02 0.0029 24.7 3.5 22 104-126 83-104 (310)
375 PLN02752 [acyl-carrier protein 20.5 1.5E+02 0.0034 24.6 3.9 18 109-126 126-143 (343)
376 TIGR03707 PPK2_P_aer polyphosp 20.5 1.4E+02 0.0031 23.3 3.4 39 31-73 30-68 (230)
377 TIGR02816 pfaB_fam PfaB family 20.4 96 0.0021 27.8 2.7 19 108-126 266-284 (538)
378 KOG0780 Signal recognition par 20.3 5.7E+02 0.012 22.1 10.0 36 32-71 101-136 (483)
379 COG3977 Alanine-alpha-ketoisov 20.1 4.3E+02 0.0092 21.9 5.9 83 32-122 30-113 (417)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=100.00 E-value=3.9e-39 Score=257.21 Aligned_cols=250 Identities=46% Similarity=0.773 Sum_probs=217.7
Q ss_pred cccccccCCC-C-CcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHH
Q 024286 18 IAELEKPVSS-E-VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAK 95 (269)
Q Consensus 18 ~~~~~~p~~~-~-~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~ 95 (269)
...+|+|... . .+.|+|||+|||||..|+.....+..++.+++.++++.|+++|||+.|+.++|...+|..++++|+.
T Consensus 75 ~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~ 154 (336)
T KOG1515|consen 75 PVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVL 154 (336)
T ss_pred EEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHH
Confidence 3556666652 2 5679999999999999998888899999999998899999999999999999999999999999999
Q ss_pred hc-ccccCCCCCccEEEeecCchHHHHHHHHHHhhhc---cccccceeeeCCccCCCCCCchhhh--hcCCcccchHHHH
Q 024286 96 SR-SWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES---EVEILGNILLNPMFGGQERTESEKR--LDGKYFVTVQDRD 169 (269)
Q Consensus 96 ~~-~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~---~~~~~~~i~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~ 169 (269)
+. -...+.|++ +++|+|.|+||+||..++.+..+. ...++|.|+++|++........+.+ ....+.......+
T Consensus 155 ~~~~~~~~~D~~-rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 233 (336)
T KOG1515|consen 155 KNSWLKLGADPS-RVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKID 233 (336)
T ss_pred HhHHHHhCCCcc-cEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHH
Confidence 97 455669999 999999999999999999998754 3679999999999998887777655 4455667777888
Q ss_pred HHHHHhCCCCC-CCCCCCCCCCC-CCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeee
Q 024286 170 WYWRAYLPEGA-NRDHPACNPFG-PKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYF 247 (269)
Q Consensus 170 ~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 247 (269)
.+|+.+.+... ..+.+..+++. ....+.....+||+|++.++.|.+.+++..++++|++.|.++++.+++++.|+|..
T Consensus 234 ~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~ 313 (336)
T KOG1515|consen 234 KWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHI 313 (336)
T ss_pred HHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEe
Confidence 88888899888 78999998887 44455566668899999999999999999999999999999999999999999998
Q ss_pred CCCC-chHHHHHHHHHHHhhcC
Q 024286 248 LPNN-GHFYTVMDEISNFVSCN 268 (269)
Q Consensus 248 ~~~~-~~~~~~~~~i~~fl~~~ 268 (269)
.... +...+.++++.+|+++.
T Consensus 314 ~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 314 LDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred cCCchhhHHHHHHHHHHHHhhc
Confidence 8554 78899999999999875
No 2
>PRK10162 acetyl esterase; Provisional
Probab=100.00 E-value=2.2e-36 Score=245.56 Aligned_cols=243 Identities=21% Similarity=0.292 Sum_probs=192.7
Q ss_pred ccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHh
Q 024286 17 NIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKS 96 (269)
Q Consensus 17 ~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~ 96 (269)
..+.+|.|... . .|+|||+|||||..|+... +..+++.|+...|+.|+++|||+.|+.+++..++|+.++++|+.+
T Consensus 69 i~~~~y~P~~~-~-~p~vv~~HGGg~~~g~~~~--~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~ 144 (318)
T PRK10162 69 VETRLYYPQPD-S-QATLFYLHGGGFILGNLDT--HDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQ 144 (318)
T ss_pred eEEEEECCCCC-C-CCEEEEEeCCcccCCCchh--hhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 55788888643 2 4999999999999888765 677888999866999999999999999999999999999999998
Q ss_pred cccccCCCCCccEEEeecCchHHHHHHHHHHhhhcc---ccccceeeeCCccCCCCCCchhhhhcCC-cccchHHHHHHH
Q 024286 97 RSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESE---VEILGNILLNPMFGGQERTESEKRLDGK-YFVTVQDRDWYW 172 (269)
Q Consensus 97 ~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~---~~~~~~i~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 172 (269)
....++++++ +|+|+|+|+||++|+.++.+..+.. ..++++++++|+++.... .+....... .........+++
T Consensus 145 ~~~~~~~d~~-~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~-~s~~~~~~~~~~l~~~~~~~~~ 222 (318)
T PRK10162 145 HAEDYGINMS-RIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS-VSRRLLGGVWDGLTQQDLQMYE 222 (318)
T ss_pred hHHHhCCChh-HEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCC-hhHHHhCCCccccCHHHHHHHH
Confidence 8777778999 9999999999999999998765432 468999999999886432 222222222 235556677788
Q ss_pred HHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCC-CC
Q 024286 173 RAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLP-NN 251 (269)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~-~~ 251 (269)
..|.+.......+..++.. .++. ..+||++|++|+.|.+.+++..|+++|++.|.++++++++|..|+|.... ..
T Consensus 223 ~~y~~~~~~~~~p~~~p~~---~~l~-~~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~ 298 (318)
T PRK10162 223 EAYLSNDADRESPYYCLFN---NDLT-RDVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMM 298 (318)
T ss_pred HHhCCCccccCCcccCcch---hhhh-cCCCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCch
Confidence 8887655444444444421 2220 12789999999999999999999999999999999999999999997663 45
Q ss_pred chHHHHHHHHHHHhhcCC
Q 024286 252 GHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 252 ~~~~~~~~~i~~fl~~~~ 269 (269)
++.++.++.+.+||++++
T Consensus 299 ~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 299 DTADDALRDGAQFFTAQL 316 (318)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 778899999999998764
No 3
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=100.00 E-value=2.3e-33 Score=228.22 Aligned_cols=243 Identities=27% Similarity=0.479 Sum_probs=196.2
Q ss_pred cccccccc-CCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHH
Q 024286 17 NIAELEKP-VSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAK 95 (269)
Q Consensus 17 ~~~~~~~p-~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~ 95 (269)
..+++|.| .....+.|+|||+|||||..|+... +...+..++...|+.|+++|||+.|+.+++..++|+.++++|+.
T Consensus 64 ~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~--~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~ 141 (312)
T COG0657 64 VPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRT--HDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLR 141 (312)
T ss_pred eeEEEECCCCCCCCCCcEEEEEeCCeeeecChhh--hHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHH
Confidence 44788888 2334445999999999999998876 45777777777799999999999999999999999999999999
Q ss_pred hcccccCCCCCccEEEeecCchHHHHHHHHHHhhhc-cccccceeeeCCccCCCCCCchhhhhcCCcccchHHHH-HHHH
Q 024286 96 SRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES-EVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRD-WYWR 173 (269)
Q Consensus 96 ~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~-~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 173 (269)
++...+++|++ +|+++|+|+||++|+.++....+. .....+.++++|+++......+................ ++..
T Consensus 142 ~~~~~~g~dp~-~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (312)
T COG0657 142 ANAAELGIDPS-RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDAAAILAWFAD 220 (312)
T ss_pred hhhHhhCCCcc-ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCccccCHHHHHHHHHH
Confidence 99888889999 999999999999999999987654 34689999999999887633444444445555555544 7777
Q ss_pred HhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCch
Q 024286 174 AYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGH 253 (269)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 253 (269)
.+.........+..+++.... +.. +||++|++|+.|.+.+++..+.++|++.|+.++++.++++.|+|..... +.
T Consensus 221 ~~~~~~~~~~~p~~spl~~~~--~~~--lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~-~~ 295 (312)
T COG0657 221 LYLGAAPDREDPEASPLASDD--LSG--LPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYPGMIHGFDLLTG-PE 295 (312)
T ss_pred HhCcCccccCCCccCcccccc--ccC--CCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEEEEeCCcceeccccCc-HH
Confidence 777655555555555553322 232 7899999999999999999999999999999999999999999876643 56
Q ss_pred HHHHHHHHHHHhhc
Q 024286 254 FYTVMDEISNFVSC 267 (269)
Q Consensus 254 ~~~~~~~i~~fl~~ 267 (269)
..+.+..+.+|++.
T Consensus 296 a~~~~~~~~~~l~~ 309 (312)
T COG0657 296 ARSALRQIAAFLRA 309 (312)
T ss_pred HHHHHHHHHHHHHH
Confidence 67778888888874
No 4
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=100.00 E-value=1.8e-33 Score=216.74 Aligned_cols=205 Identities=33% Similarity=0.551 Sum_probs=162.7
Q ss_pred EEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEEee
Q 024286 34 IIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAG 113 (269)
Q Consensus 34 vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G 113 (269)
|||+|||||+.|+... ...++..++++.|+.|+++|||+.|+.+++..++|+.++++|+.+....++++.+ +|+|+|
T Consensus 1 v~~~HGGg~~~g~~~~--~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~-~i~l~G 77 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--HWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPE-RIVLIG 77 (211)
T ss_dssp EEEE--STTTSCGTTT--HHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEE-EEEEEE
T ss_pred CEEECCcccccCChHH--HHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeecccccccccccc-ceEEee
Confidence 7999999999988877 4778888887449999999999999999999999999999999999777778999 999999
Q ss_pred cCchHHHHHHHHHHhhhcc-ccccceeeeCCccCC-CCCCchh---hhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCC
Q 024286 114 DSSGGNIVHHVALRAVESE-VEILGNILLNPMFGG-QERTESE---KRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACN 188 (269)
Q Consensus 114 ~S~Gg~la~~~a~~~~~~~-~~~~~~i~~~p~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (269)
+|+||++|+.++.+..+.. ..++++++++|+.+. .....+. .......+.........+..+.+ ....+.+..+
T Consensus 78 ~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s 156 (211)
T PF07859_consen 78 DSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLP-GSDRDDPLAS 156 (211)
T ss_dssp ETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHS-TGGTTSTTTS
T ss_pred cccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccccccc-cccccccccc
Confidence 9999999999998876653 569999999999877 3333333 22344456667777777777765 4445556666
Q ss_pred CCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeee
Q 024286 189 PFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFY 246 (269)
Q Consensus 189 ~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 246 (269)
++.. ...+ +.||++|++|+.|.+++++..|+++|++.|.++++++++|+.|+|.
T Consensus 157 p~~~--~~~~--~~Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 157 PLNA--SDLK--GLPPTLIIHGEDDVLVDDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp GGGS--SCCT--TCHEEEEEEETTSTTHHHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred cccc--cccc--cCCCeeeeccccccchHHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 5433 1222 2789999999999999999999999999999999999999999874
No 5
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.94 E-value=9.9e-26 Score=197.87 Aligned_cols=224 Identities=16% Similarity=0.100 Sum_probs=158.1
Q ss_pred CccccccccCCC--CCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC-----------CCCC
Q 024286 16 PNIAELEKPVSS--EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-----------RYPC 82 (269)
Q Consensus 16 ~~~~~~~~p~~~--~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-----------~~~~ 82 (269)
.....+++|.+. .+++|+||++|||....-+ ..+....+.|+.+ ||+|+.+|||++... ....
T Consensus 377 ~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~---~~~~~~~q~~~~~-G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~ 452 (620)
T COG1506 377 TIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVG---YSFNPEIQVLASA-GYAVLAPNYRGSTGYGREFADAIRGDWGGV 452 (620)
T ss_pred EEEEEEecCCCCCCCCCCCEEEEeCCCCccccc---cccchhhHHHhcC-CeEEEEeCCCCCCccHHHHHHhhhhccCCc
Confidence 445677888763 3457999999999753322 2367888999999 999999999987652 2335
Q ss_pred chhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcc
Q 024286 83 AYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYF 162 (269)
Q Consensus 83 ~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 162 (269)
..+|+.++++++.+... +|++ |++|+|+|+||+++++++.+.+ .+++++..++.++..............
T Consensus 453 ~~~D~~~~~~~l~~~~~---~d~~-ri~i~G~SyGGymtl~~~~~~~----~f~a~~~~~~~~~~~~~~~~~~~~~~~-- 522 (620)
T COG1506 453 DLEDLIAAVDALVKLPL---VDPE-RIGITGGSYGGYMTLLAATKTP----RFKAAVAVAGGVDWLLYFGESTEGLRF-- 522 (620)
T ss_pred cHHHHHHHHHHHHhCCC---cChH-HeEEeccChHHHHHHHHHhcCc----hhheEEeccCcchhhhhccccchhhcC--
Confidence 67899999999988776 8999 9999999999999999998754 388888888866543322111100000
Q ss_pred cchHHHHHHHHHhCCCC--CCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChh--HHHHHHHHHHHCCCCeEEEEe
Q 024286 163 VTVQDRDWYWRAYLPEG--ANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYL 238 (269)
Q Consensus 163 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~ 238 (269)
.+....... ....+...+++. ..+.+ .+|+|++||++|.-++ ++..+.++|+..|.++++++|
T Consensus 523 --------~~~~~~~~~~~~~~~~~~~sp~~-~~~~i----~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~ 589 (620)
T COG1506 523 --------DPEENGGGPPEDREKYEDRSPIF-YADNI----KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVF 589 (620)
T ss_pred --------CHHHhCCCcccChHHHHhcChhh-hhccc----CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEe
Confidence 000000000 011111222211 11222 3499999999997765 789999999999999999999
Q ss_pred CCCceeeeeCCCCchHHHHHHHHHHHhhcCC
Q 024286 239 EQATIGFYFLPNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 239 ~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~~ 269 (269)
|+++|++.. .+...+.++++.+|+++++
T Consensus 590 p~e~H~~~~---~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 590 PDEGHGFSR---PENRVKVLKEILDWFKRHL 617 (620)
T ss_pred CCCCcCCCC---chhHHHHHHHHHHHHHHHh
Confidence 999999753 4568889999999999874
No 6
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.94 E-value=1.3e-25 Score=172.25 Aligned_cols=226 Identities=19% Similarity=0.184 Sum_probs=150.1
Q ss_pred cccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC--------CCCchhhHHHHH
Q 024286 20 ELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR--------YPCAYDDGWTVL 91 (269)
Q Consensus 20 ~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~--------~~~~~~d~~~~~ 91 (269)
..+.|.+..+.+..|+++||.| ...+..+...+.+|+.. ||.|+++||++++.+. +...++|+...+
T Consensus 43 ~~W~p~~~~~pr~lv~~~HG~g----~~~s~~~~~~a~~l~~~-g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~ 117 (313)
T KOG1455|consen 43 QSWLPLSGTEPRGLVFLCHGYG----EHSSWRYQSTAKRLAKS-GFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFF 117 (313)
T ss_pred EecccCCCCCCceEEEEEcCCc----ccchhhHHHHHHHHHhC-CCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHH
Confidence 4556655434448999999955 33444578899999999 9999999999987653 333467888888
Q ss_pred HHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhh---------------
Q 024286 92 KWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKR--------------- 156 (269)
Q Consensus 92 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~--------------- 156 (269)
+.++.+.+ ++..+.+++||||||++|+.++.+.+.. .+|+|+.+|++...........
T Consensus 118 ~~i~~~~e----~~~lp~FL~GeSMGGAV~Ll~~~k~p~~---w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~w 190 (313)
T KOG1455|consen 118 DSIKEREE----NKGLPRFLFGESMGGAVALLIALKDPNF---WDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTW 190 (313)
T ss_pred HHHhhccc----cCCCCeeeeecCcchHHHHHHHhhCCcc---cccceeeecccccCCccCCCcHHHHHHHHHHHhCCce
Confidence 88777765 3333899999999999999999986665 9999999999876543211100
Q ss_pred --hcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCC-----------------CCCCCccCCCCCceeEEecCCCcChh
Q 024286 157 --LDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFG-----------------PKGIDLVGVKFPKSLVVVAGLDLIQD 217 (269)
Q Consensus 157 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~P~li~~G~~D~~~~ 217 (269)
............+...+.. ....+.+.... .+...+ ..|+||+||++|.+.+
T Consensus 191 k~vp~~d~~~~~~kdp~~r~~-----~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~v----tvPflilHG~dD~VTD 261 (313)
T KOG1455|consen 191 KIVPTKDIIDVAFKDPEKRKI-----LRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEV----TVPFLILHGTDDKVTD 261 (313)
T ss_pred eecCCccccccccCCHHHHHH-----hhcCCceecCCccHHHHHHHHHHHHHHHHhcccc----cccEEEEecCCCcccC
Confidence 0000000000000000000 01111111111 111222 2399999999999886
Q ss_pred H--HHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 218 W--QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 218 ~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
+ ++.+++.+.. .+.++..|||+-|++......+..+.++.+|++||+++
T Consensus 262 p~~Sk~Lye~A~S--~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 262 PKVSKELYEKASS--SDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cHHHHHHHHhccC--CCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 5 4666666554 46799999999999876445778999999999999986
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.91 E-value=4.5e-23 Score=170.49 Aligned_cols=228 Identities=18% Similarity=0.158 Sum_probs=131.2
Q ss_pred cccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC--------CchhhHHHHHHH
Q 024286 22 EKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP--------CAYDDGWTVLKW 93 (269)
Q Consensus 22 ~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~--------~~~~d~~~~~~~ 93 (269)
+.|.+.+.+ |+||++||.+. +. ..+|..++..|+++ ||.|+++|+|+++.+..+ ...+|+.+.++.
T Consensus 79 ~~p~~~~~~-~~iv~lHG~~~---~~-~~~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~ 152 (349)
T PLN02385 79 WLPENSRPK-AAVCFCHGYGD---TC-TFFFEGIARKIASS-GYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSK 152 (349)
T ss_pred EecCCCCCC-eEEEEECCCCC---cc-chHHHHHHHHHHhC-CCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHH
Confidence 445444444 89999999442 22 22356788889887 999999999998866422 123455555555
Q ss_pred HHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCC-c-hh-hh--------hcC---
Q 024286 94 AKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT-E-SE-KR--------LDG--- 159 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~-~-~~-~~--------~~~--- 159 (269)
+..... .... +++|+||||||.+|+.++.++++. ++++|+++|+....... + .. .. ...
T Consensus 153 l~~~~~---~~~~-~~~LvGhSmGG~val~~a~~~p~~---v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 225 (349)
T PLN02385 153 IKGNPE---FRGL-PSFLFGQSMGGAVALKVHLKQPNA---WDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKL 225 (349)
T ss_pred HHhccc---cCCC-CEEEEEeccchHHHHHHHHhCcch---hhheeEecccccccccccCchHHHHHHHHHHHHCCCcee
Confidence 543321 3455 899999999999999999987765 99999999987532211 0 00 00 000
Q ss_pred ---Ccccch---HHHHHHHHHhCCCCCCCCCCCC----------CCCCCCCCCccCCCCCceeEEecCCCcChhHH--HH
Q 024286 160 ---KYFVTV---QDRDWYWRAYLPEGANRDHPAC----------NPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LA 221 (269)
Q Consensus 160 ---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~--~~ 221 (269)
...... .........+...... ..... .........+ ..|+|+++|++|.+++.. +.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~l~~i----~~P~Lii~G~~D~vv~~~~~~~ 300 (349)
T PLN02385 226 VPQKDLAELAFRDLKKRKMAEYNVIAYK-DKPRLRTAVELLRTTQEIEMQLEEV----SLPLLILHGEADKVTDPSVSKF 300 (349)
T ss_pred cCCCccccccccCHHHHHHhhcCcceeC-CCcchHHHHHHHHHHHHHHHhcccC----CCCEEEEEeCCCCccChHHHHH
Confidence 000000 0000000000000000 00000 0000001111 349999999999998753 33
Q ss_pred HHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcCC
Q 024286 222 YMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 222 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~~ 269 (269)
+.+.+. ..+++++++++++|........+..+++++.+.+||+++.
T Consensus 301 l~~~~~--~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 301 LYEKAS--SSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HHHHcC--CCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 333332 2457899999999987544222225569999999999763
No 8
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=2e-22 Score=165.55 Aligned_cols=233 Identities=17% Similarity=0.136 Sum_probs=134.2
Q ss_pred ccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC--------CchhhHHHHHH
Q 024286 21 LEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP--------CAYDDGWTVLK 92 (269)
Q Consensus 21 ~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~--------~~~~d~~~~~~ 92 (269)
.+.|.+.....++||++||.+- +. ...+..++..|+.+ ||.|+++|+|+++.+... ...+|+.++++
T Consensus 49 ~~~~~~~~~~~~~VvllHG~~~---~~-~~~~~~~~~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~ 123 (330)
T PLN02298 49 SWLPSSSSPPRALIFMVHGYGN---DI-SWTFQSTAIFLAQM-GFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFN 123 (330)
T ss_pred EEecCCCCCCceEEEEEcCCCC---Cc-ceehhHHHHHHHhC-CCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHH
Confidence 3445433233489999999431 22 22245667788887 999999999998876421 23567788888
Q ss_pred HHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCc-hh--h-------hhcCC--
Q 024286 93 WAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTE-SE--K-------RLDGK-- 160 (269)
Q Consensus 93 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~-~~--~-------~~~~~-- 160 (269)
++..... .+.. +++|+||||||.+|+.++.+.++. ++++|+.+|+........ .. . .....
T Consensus 124 ~l~~~~~---~~~~-~i~l~GhSmGG~ia~~~a~~~p~~---v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (330)
T PLN02298 124 SVKQREE---FQGL-PRFLYGESMGGAICLLIHLANPEG---FDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLA 196 (330)
T ss_pred HHHhccc---CCCC-CEEEEEecchhHHHHHHHhcCccc---ceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCc
Confidence 8876532 3445 899999999999999999877654 999999999875432110 00 0 00000
Q ss_pred -----cccchH---HHHHHHHHhCCCCCCCCCCCCC---CCCC----CCCCccCCCCCceeEEecCCCcChhHH--HHHH
Q 024286 161 -----YFVTVQ---DRDWYWRAYLPEGANRDHPACN---PFGP----KGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYM 223 (269)
Q Consensus 161 -----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~P~li~~G~~D~~~~~~--~~~~ 223 (269)
...... ..........+..... .+... .+.. ....+..+ ..|+||+||++|.+++.. +.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~ivp~~~~~~l~ 274 (330)
T PLN02298 197 IVPTADLLEKSVKVPAKKIIAKRNPMRYNG-KPRLGTVVELLRVTDYLGKKLKDV-SIPFIVLHGSADVVTDPDVSRALY 274 (330)
T ss_pred cccCCCcccccccCHHHHHHHHhCccccCC-CccHHHHHHHHHHHHHHHHhhhhc-CCCEEEEecCCCCCCCHHHHHHHH
Confidence 000000 0000000000000000 00000 0000 00001111 359999999999998753 4444
Q ss_pred HHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcCC
Q 024286 224 EGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~~ 269 (269)
+++. ..+.+++++++++|...........+++.+.+.+||.+++
T Consensus 275 ~~i~--~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 275 EEAK--SEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERC 318 (330)
T ss_pred HHhc--cCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 4433 2357899999999987654222334678899999998763
No 9
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.91 E-value=1.7e-23 Score=161.30 Aligned_cols=188 Identities=17% Similarity=0.148 Sum_probs=130.3
Q ss_pred hHHHHHHHhhcCCCEEEeeccCCCCCCC----------C-CCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHH
Q 024286 52 YDILCRRLVGTCKAVVVSVNYRRAPENR----------Y-PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNI 120 (269)
Q Consensus 52 ~~~~~~~l~~~~g~~v~~~d~r~~~~~~----------~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~l 120 (269)
|....+.|+++ ||+|+.+|||++++.. . ...++|+.++++++.++.. +|++ ||+|+|+|+||++
T Consensus 3 f~~~~~~la~~-Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---iD~~-ri~i~G~S~GG~~ 77 (213)
T PF00326_consen 3 FNWNAQLLASQ-GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYY---IDPD-RIGIMGHSYGGYL 77 (213)
T ss_dssp -SHHHHHHHTT-T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTS---EEEE-EEEEEEETHHHHH
T ss_pred eeHHHHHHHhC-CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcccc---ccce-eEEEEcccccccc
Confidence 44567788888 9999999999887421 1 1346889999999988865 8999 9999999999999
Q ss_pred HHHHHHHhhhccccccceeeeCCccCCCCCCchh---hh---hcCCcc-cchHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 024286 121 VHHVALRAVESEVEILGNILLNPMFGGQERTESE---KR---LDGKYF-VTVQDRDWYWRAYLPEGANRDHPACNPFGPK 193 (269)
Q Consensus 121 a~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~---~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (269)
|+.++.+.++. ++++++.+|+.+........ .. ...... ...... ..+....+
T Consensus 78 a~~~~~~~~~~---f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~---------------- 137 (213)
T PF00326_consen 78 ALLAATQHPDR---FKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFY-RELSPISP---------------- 137 (213)
T ss_dssp HHHHHHHTCCG---SSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHH-HHHHHGGG----------------
T ss_pred cchhhccccee---eeeeeccceecchhcccccccccccccccccCccchhhhhh-hhhccccc----------------
Confidence 99999976665 99999999998876543221 00 000000 001000 01111100
Q ss_pred CCCccCCCCCceeEEecCCCcChh--HHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcCC
Q 024286 194 GIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 194 ~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~~ 269 (269)
..... ..+|+||+||++|..++ ++..+.++|++.+.+++++++|+++|++. ..+...+...++.+||++++
T Consensus 138 ~~~~~--~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~---~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 138 ADNVQ--IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG---NPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp GGGCG--GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT---SHHHHHHHHHHHHHHHHHHT
T ss_pred ccccc--CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC---CchhHHHHHHHHHHHHHHHc
Confidence 01100 13599999999999875 57899999999999999999999999753 33456689999999999875
No 10
>PHA02857 monoglyceride lipase; Provisional
Probab=99.90 E-value=1.2e-22 Score=162.80 Aligned_cols=229 Identities=15% Similarity=0.099 Sum_probs=132.9
Q ss_pred cccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC-----C---chhhHHH
Q 024286 18 IAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP-----C---AYDDGWT 89 (269)
Q Consensus 18 ~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-----~---~~~d~~~ 89 (269)
...+|.|.+ ..+ |+|+++||.+. + ...|..+++.|+.+ ||.|+++|+|+++.+... . .++|+.+
T Consensus 14 ~~~~~~~~~-~~~-~~v~llHG~~~---~--~~~~~~~~~~l~~~-g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~ 85 (276)
T PHA02857 14 YCKYWKPIT-YPK-ALVFISHGAGE---H--SGRYEELAENISSL-GILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQ 85 (276)
T ss_pred EEEeccCCC-CCC-EEEEEeCCCcc---c--cchHHHHHHHHHhC-CCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHH
Confidence 344556642 333 88999999432 2 23388899999988 999999999999865421 1 2344555
Q ss_pred HHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchh-------hhhcCCcc
Q 024286 90 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESE-------KRLDGKYF 162 (269)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~-------~~~~~~~~ 162 (269)
.+.++.+. ...+ +++|+||||||.+|+.++.+.++. ++++|+.+|........... ........
T Consensus 86 ~l~~~~~~-----~~~~-~~~lvG~S~GG~ia~~~a~~~p~~---i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (276)
T PHA02857 86 HVVTIKST-----YPGV-PVFLLGHSMGATISILAAYKNPNL---FTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKI 156 (276)
T ss_pred HHHHHHhh-----CCCC-CEEEEEcCchHHHHHHHHHhCccc---cceEEEeccccccccccHHHHHHHHHHHHhCCCCc
Confidence 55555443 2345 899999999999999999876654 99999999987632210000 00000000
Q ss_pred c---chHH----HHHHHHHhCCCCCCCCCCCCC----CCC-CCCCCccCCC--CCceeEEecCCCcChhHH--HHHHHHH
Q 024286 163 V---TVQD----RDWYWRAYLPEGANRDHPACN----PFG-PKGIDLVGVK--FPKSLVVVAGLDLIQDWQ--LAYMEGL 226 (269)
Q Consensus 163 ~---~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~--~~P~li~~G~~D~~~~~~--~~~~~~l 226 (269)
. .... ..... .+............. ... ......+.+. ..|+|+++|++|.+++.. ..+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~- 234 (276)
T PHA02857 157 VGKLCPESVSRDMDEVY-KYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQH- 234 (276)
T ss_pred cCCCCHhhccCCHHHHH-HHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHH-
Confidence 0 0000 00000 010000000000000 000 0000001111 349999999999998753 333232
Q ss_pred HHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 227 KKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 227 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
...++++.++++++|....+ ..+..+++++++.+||+++
T Consensus 235 --~~~~~~~~~~~~~gH~~~~e-~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 235 --ANCNREIKIYEGAKHHLHKE-TDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred --ccCCceEEEeCCCcccccCC-chhHHHHHHHHHHHHHHHh
Confidence 23367999999999987655 3355889999999999864
No 11
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.90 E-value=6.6e-22 Score=157.96 Aligned_cols=232 Identities=16% Similarity=0.125 Sum_probs=141.4
Q ss_pred eeecCCCCCCCCCccccccccCC-CCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeecc--CCCCCCC-
Q 024286 4 RIYRPTNGEEHRPNIAELEKPVS-SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNY--RRAPENR- 79 (269)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~p~~-~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~--r~~~~~~- 79 (269)
|.|+-.+.....+....+|.|++ ..+++|+|+++||.+- +.....+...+..++.+.|+.|++||+ |+.+...
T Consensus 14 ~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~---~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~ 90 (275)
T TIGR02821 14 GFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTC---THENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGE 90 (275)
T ss_pred EEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCC---CccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCC
Confidence 34444444444555677888875 2345699999999542 333211222345676655999999997 3322100
Q ss_pred ------------CC-----------CchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhcccccc
Q 024286 80 ------------YP-----------CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEIL 136 (269)
Q Consensus 80 ------------~~-----------~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~ 136 (269)
+- .....+.+.+..+.+. .++++.+ +++|+||||||++|+.++.++++. ++
T Consensus 91 ~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~-~~~~~G~S~GG~~a~~~a~~~p~~---~~ 164 (275)
T TIGR02821 91 DDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAA--QFPLDGE-RQGITGHSMGGHGALVIALKNPDR---FK 164 (275)
T ss_pred cccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHh--hCCCCCC-ceEEEEEChhHHHHHHHHHhCccc---ce
Confidence 00 0011222222222222 1236778 999999999999999999988776 89
Q ss_pred ceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcCh
Q 024286 137 GNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQ 216 (269)
Q Consensus 137 ~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~ 216 (269)
++++++|+.+...... . ......++..... .....++. ....... ..+|+++.||+.|.++
T Consensus 165 ~~~~~~~~~~~~~~~~----------~-----~~~~~~~l~~~~~-~~~~~~~~-~~~~~~~--~~~plli~~G~~D~~v 225 (275)
T TIGR02821 165 SVSAFAPIVAPSRCPW----------G-----QKAFSAYLGADEA-AWRSYDAS-LLVADGG--RHSTILIDQGTADQFL 225 (275)
T ss_pred EEEEECCccCcccCcc----------h-----HHHHHHHhccccc-chhhcchH-HHHhhcc--cCCCeeEeecCCCccc
Confidence 9999999976432100 0 1112222221111 00111110 0001111 1469999999999988
Q ss_pred hH---HHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcCC
Q 024286 217 DW---QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 217 ~~---~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~~ 269 (269)
+. +..+.+++++.+.++++.++||++|+|.. ..+.+.+.++|..+++
T Consensus 226 ~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~------~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 226 DEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYF------IASFIADHLRHHAERL 275 (275)
T ss_pred CccccHHHHHHHHHHcCCCeEEEEeCCCCccchh------HHHhHHHHHHHHHhhC
Confidence 75 36788999999999999999999999864 4678888888887763
No 12
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.90 E-value=5.2e-23 Score=150.67 Aligned_cols=209 Identities=13% Similarity=0.071 Sum_probs=139.1
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC-------CCCCchhhHHHHHHHHHhcccccCCC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-------RYPCAYDDGWTVLKWAKSRSWLQSKD 104 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~ 104 (269)
.+|+++|| | .|+.+. ...+.+.|.++ ||.|.+|.|++++.. +..++++|+.++++++++.+.
T Consensus 16 ~AVLllHG--F-TGt~~D--vr~Lgr~L~e~-GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy----- 84 (243)
T COG1647 16 RAVLLLHG--F-TGTPRD--VRMLGRYLNEN-GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGY----- 84 (243)
T ss_pred EEEEEEec--c-CCCcHH--HHHHHHHHHHC-CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCC-----
Confidence 79999999 4 445544 78889999988 999999999998754 345678999999999997743
Q ss_pred CCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchh-------hhhcCCcccchHHHHHHHHHhCC
Q 024286 105 SKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESE-------KRLDGKYFVTVQDRDWYWRAYLP 177 (269)
Q Consensus 105 ~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 177 (269)
+ .|.++|.||||-+|+.+|.+++ +++++.+|+.........-. ...+.-...+.+..+..+..+..
T Consensus 85 -~-eI~v~GlSmGGv~alkla~~~p-----~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~ 157 (243)
T COG1647 85 -D-EIAVVGLSMGGVFALKLAYHYP-----PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKD 157 (243)
T ss_pred -C-eEEEEeecchhHHHHHHHhhCC-----ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhc
Confidence 4 8999999999999999998764 89999999877644321111 11111112222333333333321
Q ss_pred CCCCCCCC---CCCCCCCCCCCccCCCCCceeEEecCCCcChhHH--HHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCc
Q 024286 178 EGANRDHP---ACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNG 252 (269)
Q Consensus 178 ~~~~~~~~---~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~ 252 (269)
........ .........+.+ ..|+++++|.+|+.++.. ..+.+... ..+.++..|++.||.+. ...
T Consensus 158 ~~~~~~~~~~~~i~~~~~~~~~I----~~pt~vvq~~~D~mv~~~sA~~Iy~~v~--s~~KeL~~~e~SgHVIt---~D~ 228 (243)
T COG1647 158 TPMTTTAQLKKLIKDARRSLDKI----YSPTLVVQGRQDEMVPAESANFIYDHVE--SDDKELKWLEGSGHVIT---LDK 228 (243)
T ss_pred chHHHHHHHHHHHHHHHhhhhhc----ccchhheecccCCCCCHHHHHHHHHhcc--CCcceeEEEccCCceee---cch
Confidence 11000000 000000111222 239999999999998853 33333322 34679999999999986 456
Q ss_pred hHHHHHHHHHHHhhc
Q 024286 253 HFYTVMDEISNFVSC 267 (269)
Q Consensus 253 ~~~~~~~~i~~fl~~ 267 (269)
+++++.+.+++||++
T Consensus 229 Erd~v~e~V~~FL~~ 243 (243)
T COG1647 229 ERDQVEEDVITFLEK 243 (243)
T ss_pred hHHHHHHHHHHHhhC
Confidence 899999999999974
No 13
>PRK10566 esterase; Provisional
Probab=99.90 E-value=3.6e-22 Score=157.66 Aligned_cols=208 Identities=13% Similarity=0.072 Sum_probs=127.8
Q ss_pred cccCCC-CCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC--------------Cchhh
Q 024286 22 EKPVSS-EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP--------------CAYDD 86 (269)
Q Consensus 22 ~~p~~~-~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~--------------~~~~d 86 (269)
+.|.+. +++.|+||++||.+. +.. .+..+++.|+++ ||.|+++|||+++..... ...+|
T Consensus 17 ~~p~~~~~~~~p~vv~~HG~~~---~~~--~~~~~~~~l~~~-G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~ 90 (249)
T PRK10566 17 AFPAGQRDTPLPTVFFYHGFTS---SKL--VYSYFAVALAQA-GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQE 90 (249)
T ss_pred EcCCCCCCCCCCEEEEeCCCCc---ccc--hHHHHHHHHHhC-CCEEEEecCCcccccCCCccccchhhHHHHHHHHHHH
Confidence 446542 344599999999442 322 367788999888 999999999987542110 12356
Q ss_pred HHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeC--CccCCCCCCchhhh-hcC---C
Q 024286 87 GWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLN--PMFGGQERTESEKR-LDG---K 160 (269)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~--p~~~~~~~~~~~~~-~~~---~ 160 (269)
+.++++++.+... ++.+ +++++||||||.+|+.++.+.+. +.+.+.+. ++... .... +.. .
T Consensus 91 ~~~~~~~l~~~~~---~~~~-~i~v~G~S~Gg~~al~~~~~~~~----~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 157 (249)
T PRK10566 91 FPTLRAAIREEGW---LLDD-RLAVGGASMGGMTALGIMARHPW----VKCVASLMGSGYFTS-----LARTLFPPLIPE 157 (249)
T ss_pred HHHHHHHHHhcCC---cCcc-ceeEEeecccHHHHHHHHHhCCC----eeEEEEeeCcHHHHH-----HHHHhccccccc
Confidence 6677788776543 6788 99999999999999999887543 44443332 22110 0000 000 0
Q ss_pred cccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhH--HHHHHHHHHHCCC--CeEEE
Q 024286 161 YFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQ--DVKLL 236 (269)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~~~--~~~~~ 236 (269)
................. . ... .....+ ...|+|++||++|.+++. ++.+.++++..+. +++++
T Consensus 158 ~~~~~~~~~~~~~~~~~--~-------~~~-~~~~~i---~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~ 224 (249)
T PRK10566 158 TAAQQAEFNNIVAPLAE--W-------EVT-HQLEQL---ADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCL 224 (249)
T ss_pred ccccHHHHHHHHHHHhh--c-------Chh-hhhhhc---CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEE
Confidence 00000011111111000 0 000 000111 124999999999999874 6788888888875 47899
Q ss_pred EeCCCceeeeeCCCCchHHHHHHHHHHHhhcCC
Q 024286 237 YLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 237 ~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~~ 269 (269)
.+++++|.+. .+.+.++.+||++++
T Consensus 225 ~~~~~~H~~~--------~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 225 WEPGVRHRIT--------PEALDAGVAFFRQHL 249 (249)
T ss_pred ecCCCCCccC--------HHHHHHHHHHHHhhC
Confidence 9999999752 457899999999875
No 14
>PRK10749 lysophospholipase L2; Provisional
Probab=99.89 E-value=5.8e-22 Score=162.52 Aligned_cols=217 Identities=19% Similarity=0.125 Sum_probs=130.7
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC-------------CchhhHHHHHHHHHhcc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP-------------CAYDDGWTVLKWAKSRS 98 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-------------~~~~d~~~~~~~~~~~~ 98 (269)
++||++||.+ ++ ...|..++..+++. ||.|+++|+|+++.+..+ ...+|+.++++.+.+.
T Consensus 55 ~~vll~HG~~---~~--~~~y~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~- 127 (330)
T PRK10749 55 RVVVICPGRI---ES--YVKYAELAYDLFHL-GYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQP- 127 (330)
T ss_pred cEEEEECCcc---ch--HHHHHHHHHHHHHC-CCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhc-
Confidence 7999999932 12 22367788888877 999999999999876421 1223444444443322
Q ss_pred cccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhh------h---hc----------C
Q 024286 99 WLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEK------R---LD----------G 159 (269)
Q Consensus 99 ~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~------~---~~----------~ 159 (269)
.+.. +++++||||||.+|+.++.+.++. ++++|+.+|........+... . .. .
T Consensus 128 ----~~~~-~~~l~GhSmGG~ia~~~a~~~p~~---v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (330)
T PRK10749 128 ----GPYR-KRYALAHSMGGAILTLFLQRHPGV---FDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTG 199 (330)
T ss_pred ----CCCC-CeEEEEEcHHHHHHHHHHHhCCCC---cceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCC
Confidence 2445 899999999999999999887665 999999999865322111100 0 00 0
Q ss_pred ----Ccc------cchHHHHHHHHHhCCCCCCCC-CCCC----CC------CCCCCCCccCCCCCceeEEecCCCcChhH
Q 024286 160 ----KYF------VTVQDRDWYWRAYLPEGANRD-HPAC----NP------FGPKGIDLVGVKFPKSLVVVAGLDLIQDW 218 (269)
Q Consensus 160 ----~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~----~~------~~~~~~~~~~~~~~P~li~~G~~D~~~~~ 218 (269)
... ..........+.+........ .... .. +......+ ..|+|+++|++|.+++.
T Consensus 200 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~P~Lii~G~~D~vv~~ 275 (330)
T PRK10749 200 RWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDI----TTPLLLLQAEEERVVDN 275 (330)
T ss_pred CCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCC----CCCEEEEEeCCCeeeCH
Confidence 000 001111111222211110000 0000 00 00011112 34999999999999875
Q ss_pred --HHHHHHHHHHCC---CCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 219 --QLAYMEGLKKAG---QDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 219 --~~~~~~~l~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
++.+++.+++.+ .++++++++|++|....+. ....+++++++.+||+++
T Consensus 276 ~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~-~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 276 RMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEK-DAMRSVALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCC-cHHHHHHHHHHHHHHhhc
Confidence 456667776654 4568999999999876553 334788999999999875
No 15
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.89 E-value=3.7e-21 Score=159.99 Aligned_cols=227 Identities=15% Similarity=0.127 Sum_probs=135.2
Q ss_pred ccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC--------CchhhHHHH
Q 024286 19 AELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP--------CAYDDGWTV 90 (269)
Q Consensus 19 ~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~--------~~~~d~~~~ 90 (269)
...|.|...+.+ |+||++||.+. + ...|..++..|+++ ||.|+++|+|+++.+... ...+|+.++
T Consensus 125 ~~~~~p~~~~~~-~~Vl~lHG~~~---~--~~~~~~~a~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 125 CRSWAPAAGEMR-GILIIIHGLNE---H--SGRYLHFAKQLTSC-GFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAF 197 (395)
T ss_pred EEEecCCCCCCc-eEEEEECCchH---H--HHHHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 445666544444 89999999431 2 22377889999888 999999999998765422 224677778
Q ss_pred HHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhh-------h-cCCcc
Q 024286 91 LKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKR-------L-DGKYF 162 (269)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-------~-~~~~~ 162 (269)
++++... .... +++|+||||||.+++.++. .++....++++|+.+|++......+.... . ....+
T Consensus 198 l~~l~~~-----~~~~-~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~ 270 (395)
T PLN02652 198 LEKIRSE-----NPGV-PCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQF 270 (395)
T ss_pred HHHHHHh-----CCCC-CEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcc
Confidence 8888755 2334 7999999999999998764 33322359999999999764422110000 0 00000
Q ss_pred -------cch-HHHHHHHHHhCCCCCCCCCCCC-----------CCCCCCCCCccCCCCCceeEEecCCCcChhHH--HH
Q 024286 163 -------VTV-QDRDWYWRAYLPEGANRDHPAC-----------NPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LA 221 (269)
Q Consensus 163 -------~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~--~~ 221 (269)
... .........+. +......... ..+......+ ..|+|++||++|.+++.. +.
T Consensus 271 ~~~~~~~~~~s~~~~~~~~~~~-dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I----~vPvLIi~G~~D~vvp~~~a~~ 345 (395)
T PLN02652 271 KGANKRGIPVSRDPAALLAKYS-DPLVYTGPIRVRTGHEILRISSYLTRNFKSV----TVPFMVLHGTADRVTDPLASQD 345 (395)
T ss_pred cCcccccCCcCCCHHHHHHHhc-CCCcccCCchHHHHHHHHHHHHHHHhhcccC----CCCEEEEEeCCCCCCCHHHHHH
Confidence 000 00000011110 0000000000 0000111112 249999999999998753 33
Q ss_pred HHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcCC
Q 024286 222 YMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 222 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~~ 269 (269)
+++.+ .+.+++++++++++|....+ +..+++++++.+||+.++
T Consensus 346 l~~~~--~~~~k~l~~~~ga~H~l~~e---~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 346 LYNEA--ASRHKDIKLYDGFLHDLLFE---PEREEVGRDIIDWMEKRL 388 (395)
T ss_pred HHHhc--CCCCceEEEECCCeEEeccC---CCHHHHHHHHHHHHHHHh
Confidence 33332 23457899999999987654 358999999999998763
No 16
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.88 E-value=6.5e-21 Score=159.75 Aligned_cols=219 Identities=14% Similarity=0.053 Sum_probs=133.2
Q ss_pred ccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC----CchhhHHHHHHHH
Q 024286 19 AELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP----CAYDDGWTVLKWA 94 (269)
Q Consensus 19 ~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~~ 94 (269)
-.++.|.+ +++.|+||++||.+ +.....|..+++.|+.+ ||+|+++|+|+++.+... +.......+++++
T Consensus 183 g~l~~P~~-~~~~P~Vli~gG~~----~~~~~~~~~~~~~La~~-Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l 256 (414)
T PRK05077 183 GFLHLPKG-DGPFPTVLVCGGLD----SLQTDYYRLFRDYLAPR-GIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNAL 256 (414)
T ss_pred EEEEECCC-CCCccEEEEeCCcc----cchhhhHHHHHHHHHhC-CCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHH
Confidence 34556763 34558888776632 22223366778889888 999999999998776332 1122235677888
Q ss_pred HhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHH
Q 024286 95 KSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRA 174 (269)
Q Consensus 95 ~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (269)
.+... +|.+ +|+++||||||++|+.+|...++. ++++|+.+|......... ...... ..... ..+..
T Consensus 257 ~~~~~---vd~~-ri~l~G~S~GG~~Al~~A~~~p~r---i~a~V~~~~~~~~~~~~~--~~~~~~---p~~~~-~~la~ 323 (414)
T PRK05077 257 PNVPW---VDHT-RVAAFGFRFGANVAVRLAYLEPPR---LKAVACLGPVVHTLLTDP--KRQQQV---PEMYL-DVLAS 323 (414)
T ss_pred HhCcc---cCcc-cEEEEEEChHHHHHHHHHHhCCcC---ceEEEEECCccchhhcch--hhhhhc---hHHHH-HHHHH
Confidence 77654 7888 999999999999999999876544 999999998864211100 000000 00000 01111
Q ss_pred hCCCCCCC------CCCCCCCCC-CC-CCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeee
Q 024286 175 YLPEGANR------DHPACNPFG-PK-GIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFY 246 (269)
Q Consensus 175 ~~~~~~~~------~~~~~~~~~-~~-~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 246 (269)
.+...... .....+... .. ...+ ..|+|+++|++|.++|.... +.+.+...+.++++++++.|
T Consensus 324 ~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i----~~PvLiI~G~~D~ivP~~~a--~~l~~~~~~~~l~~i~~~~~--- 394 (414)
T PRK05077 324 RLGMHDASDEALRVELNRYSLKVQGLLGRRC----PTPMLSGYWKNDPFSPEEDS--RLIASSSADGKLLEIPFKPV--- 394 (414)
T ss_pred HhCCCCCChHHHHHHhhhccchhhhhhccCC----CCcEEEEecCCCCCCCHHHH--HHHHHhCCCCeEEEccCCCc---
Confidence 11100000 000000000 00 0112 24999999999999987543 45555556789999998632
Q ss_pred eCCCCchHHHHHHHHHHHhhcCC
Q 024286 247 FLPNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 247 ~~~~~~~~~~~~~~i~~fl~~~~ 269 (269)
.+..+++++.+.+||++++
T Consensus 395 ----~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 395 ----YRNFDKALQEISDWLEDRL 413 (414)
T ss_pred ----cCCHHHHHHHHHHHHHHHh
Confidence 2368999999999999874
No 17
>PLN02442 S-formylglutathione hydrolase
Probab=99.87 E-value=1e-20 Score=151.37 Aligned_cols=222 Identities=16% Similarity=0.109 Sum_probs=130.0
Q ss_pred CCCCCccccccccCC-CCCcccEEEEEcCCccccCCCCchhh-HHHHHHHhhcCCCEEEeeccCCCC-----CC------
Q 024286 12 EEHRPNIAELEKPVS-SEVVVPVIIFFHGGSFAHSSANSAIY-DILCRRLVGTCKAVVVSVNYRRAP-----EN------ 78 (269)
Q Consensus 12 ~~~~~~~~~~~~p~~-~~~~~p~vv~~HGgg~~~~~~~~~~~-~~~~~~l~~~~g~~v~~~d~r~~~-----~~------ 78 (269)
...+.....+|.|+. ..+++|+|+++||++. +...... ....+.++.. |+.|+.||....+ ..
T Consensus 27 ~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~---~~~~~~~~~~~~~~~~~~-g~~Vv~pd~~~~g~~~~~~~~~~~~~ 102 (283)
T PLN02442 27 TLGCSMTFSVYFPPASDSGKVPVLYWLSGLTC---TDENFIQKSGAQRAAAAR-GIALVAPDTSPRGLNVEGEADSWDFG 102 (283)
T ss_pred ccCCceEEEEEcCCcccCCCCCEEEEecCCCc---ChHHHHHhhhHHHHHhhc-CeEEEecCCCCCCCCCCCCccccccC
Confidence 344556778888874 2456799999999442 3222111 2223344444 9999999975332 00
Q ss_pred ---C-C-----C-----Cchh-hHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCC
Q 024286 79 ---R-Y-----P-----CAYD-DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP 143 (269)
Q Consensus 79 ---~-~-----~-----~~~~-d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p 143 (269)
. + + .... -..+...++.+.... ++.+ +++|+|+||||++|+.++.++++. ++++++++|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~--~~~~-~~~i~G~S~GG~~a~~~a~~~p~~---~~~~~~~~~ 176 (283)
T PLN02442 103 VGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQ--LDTS-RASIFGHSMGGHGALTIYLKNPDK---YKSVSAFAP 176 (283)
T ss_pred CCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHh--cCCC-ceEEEEEChhHHHHHHHHHhCchh---EEEEEEECC
Confidence 0 0 0 0001 123333344333211 5777 999999999999999999988766 999999999
Q ss_pred ccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhH---HH
Q 024286 144 MFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW---QL 220 (269)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~---~~ 220 (269)
+++......... . ...+..... .......+.... ..... ..+|+++++|++|.+++. ++
T Consensus 177 ~~~~~~~~~~~~-----------~----~~~~~g~~~-~~~~~~d~~~~~-~~~~~-~~~pvli~~G~~D~~v~~~~~s~ 238 (283)
T PLN02442 177 IANPINCPWGQK-----------A----FTNYLGSDK-ADWEEYDATELV-SKFND-VSATILIDQGEADKFLKEQLLPE 238 (283)
T ss_pred ccCcccCchhhH-----------H----HHHHcCCCh-hhHHHcChhhhh-hhccc-cCCCEEEEECCCCccccccccHH
Confidence 986432110000 0 011111100 000000010000 00000 135999999999998874 57
Q ss_pred HHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 221 AYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 221 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
.+.+.+++.+.++++++++|.+|.|. .....+++...|..+
T Consensus 239 ~~~~~l~~~g~~~~~~~~pg~~H~~~------~~~~~i~~~~~~~~~ 279 (283)
T PLN02442 239 NFEEACKEAGAPVTLRLQPGYDHSYF------FIATFIDDHINHHAQ 279 (283)
T ss_pred HHHHHHHHcCCCeEEEEeCCCCccHH------HHHHHHHHHHHHHHH
Confidence 89999999999999999999999864 234455555555544
No 18
>PRK13604 luxD acyl transferase; Provisional
Probab=99.87 E-value=1.6e-21 Score=153.81 Aligned_cols=200 Identities=13% Similarity=0.068 Sum_probs=121.1
Q ss_pred ccccccCC-CCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCC-CCC-------CCCCchhhHHH
Q 024286 19 AELEKPVS-SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA-PEN-------RYPCAYDDGWT 89 (269)
Q Consensus 19 ~~~~~p~~-~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-~~~-------~~~~~~~d~~~ 89 (269)
-++..|+. ...+.++||+.||-+ +.. ..+..+++.|+++ ||+|+.+|+|++ +++ +......|+..
T Consensus 24 Gwl~~P~~~~~~~~~~vIi~HGf~---~~~--~~~~~~A~~La~~-G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~a 97 (307)
T PRK13604 24 VWETLPKENSPKKNNTILIASGFA---RRM--DHFAGLAEYLSSN-GFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLT 97 (307)
T ss_pred EEEEcCcccCCCCCCEEEEeCCCC---CCh--HHHHHHHHHHHHC-CCEEEEecCCCCCCCCCCccccCcccccHHHHHH
Confidence 34555643 234458999999932 222 2378899999988 999999998865 543 13345789999
Q ss_pred HHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCC--cccch--
Q 024286 90 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGK--YFVTV-- 165 (269)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~--~~~~~-- 165 (269)
+++|+++. +.+ +|+|+||||||.+|+..|.. .+++++|+.+|+.+.............. +....
T Consensus 98 aid~lk~~------~~~-~I~LiG~SmGgava~~~A~~-----~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~ 165 (307)
T PRK13604 98 VVDWLNTR------GIN-NLGLIAASLSARIAYEVINE-----IDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPE 165 (307)
T ss_pred HHHHHHhc------CCC-ceEEEEECHHHHHHHHHhcC-----CCCCEEEEcCCcccHHHHHHHhhhcccccCccccccc
Confidence 99999875 346 89999999999998766642 1389999999998754211110000000 00000
Q ss_pred -------HH-HHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHH--HHHHHHHHHCCCCeEE
Q 024286 166 -------QD-RDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKL 235 (269)
Q Consensus 166 -------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~--~~~~~~l~~~~~~~~~ 235 (269)
.. ...+.......... ...++. +..+.. ..|+|++||++|.+|+.. ..+.+.++. .++++
T Consensus 166 ~~d~~g~~l~~~~f~~~~~~~~~~---~~~s~i----~~~~~l-~~PvLiIHG~~D~lVp~~~s~~l~e~~~s--~~kkl 235 (307)
T PRK13604 166 DLDFEGHNLGSEVFVTDCFKHGWD---TLDSTI----NKMKGL-DIPFIAFTANNDSWVKQSEVIDLLDSIRS--EQCKL 235 (307)
T ss_pred ccccccccccHHHHHHHHHhcCcc---ccccHH----HHHhhc-CCCEEEEEcCCCCccCHHHHHHHHHHhcc--CCcEE
Confidence 00 01111111000000 000010 111111 139999999999999864 444444332 47899
Q ss_pred EEeCCCceeee
Q 024286 236 LYLEQATIGFY 246 (269)
Q Consensus 236 ~~~~~~~H~~~ 246 (269)
+++||+.|.+.
T Consensus 236 ~~i~Ga~H~l~ 246 (307)
T PRK13604 236 YSLIGSSHDLG 246 (307)
T ss_pred EEeCCCccccC
Confidence 99999999874
No 19
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.87 E-value=2e-20 Score=150.49 Aligned_cols=222 Identities=16% Similarity=0.204 Sum_probs=148.8
Q ss_pred Cccccccc-cCC-CCCcccEEEEEcCCccccCCCCchhhHHHHHHHhh--cCCCEEEeeccCCCC----CCCCCCchhhH
Q 024286 16 PNIAELEK-PVS-SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVG--TCKAVVVSVNYRRAP----ENRYPCAYDDG 87 (269)
Q Consensus 16 ~~~~~~~~-p~~-~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~--~~g~~v~~~d~r~~~----~~~~~~~~~d~ 87 (269)
.+.+++.+ |.. ..+..|+|||+|||||..+....+ . .++..+.. . ...++++||.+.+ +..+|.++.++
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~q-i-~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~ql 181 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQ-I-EFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQL 181 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHH-H-HHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHH
Confidence 34477787 665 233349999999999988765542 2 22222221 2 5689999999888 67899999999
Q ss_pred HHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhc--cccccceeeeCCccCCCCCCch----hhhhcCCc
Q 024286 88 WTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES--EVEILGNILLNPMFGGQERTES----EKRLDGKY 161 (269)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~--~~~~~~~i~~~p~~~~~~~~~~----~~~~~~~~ 161 (269)
.+.++++.+. .+.+ +|.|+|.|+||++++.++....+. ...++++|++|||+........ .......+
T Consensus 182 v~~Y~~Lv~~-----~G~~-nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~D 255 (374)
T PF10340_consen 182 VATYDYLVES-----EGNK-NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDNEKRD 255 (374)
T ss_pred HHHHHHHHhc-----cCCC-eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCcccccccccc
Confidence 9999999965 2446 899999999999999887765442 2457999999999987632111 11122334
Q ss_pred ccchHHHHHHHHHhCCCCCCCCCCCCCCCCC-----CCCCccCC-CCCceeEEecCCCcChhHHHHHHHHHHHCCC----
Q 024286 162 FVTVQDRDWYWRAYLPEGANRDHPACNPFGP-----KGIDLVGV-KFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQ---- 231 (269)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~---- 231 (269)
.........+.+.+.+...........++.. ....|+.+ +..-++++.|+++.+.++..+|.+.+...+.
T Consensus 256 ~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~EvfrddI~~~~~~~~~~~~~~~~ 335 (374)
T PF10340_consen 256 MLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVFRDDILEWAKKLNDVKPNKFS 335 (374)
T ss_pred ccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCccccHHHHHHHHHHHhhcCccccC
Confidence 4444445555566666522111111111111 12344433 2347999999999999999999999986653
Q ss_pred -CeEEEEeCCCceeee
Q 024286 232 -DVKLLYLEQATIGFY 246 (269)
Q Consensus 232 -~~~~~~~~~~~H~~~ 246 (269)
..+..+.+++.|.-+
T Consensus 336 ~~~nv~~~~~G~Hi~P 351 (374)
T PF10340_consen 336 NSNNVYIDEGGIHIGP 351 (374)
T ss_pred CcceEEEecCCccccc
Confidence 468888899999754
No 20
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.87 E-value=2.4e-21 Score=155.33 Aligned_cols=221 Identities=17% Similarity=0.110 Sum_probs=132.8
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC---------CCCchhhHHHHHHHHHhcccccC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR---------YPCAYDDGWTVLKWAKSRSWLQS 102 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~---------~~~~~~d~~~~~~~~~~~~~~~~ 102 (269)
.+||++||.+... .-+..++..|+.. ||.|+++|.|+++.+. +.....|+...++.+.+.
T Consensus 35 g~Vvl~HG~~Eh~-----~ry~~la~~l~~~-G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~----- 103 (298)
T COG2267 35 GVVVLVHGLGEHS-----GRYEELADDLAAR-GFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEP----- 103 (298)
T ss_pred cEEEEecCchHHH-----HHHHHHHHHHHhC-CCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhcc-----
Confidence 7999999966432 2277889999988 9999999999998775 222334444444444432
Q ss_pred CCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCC--CCchhh---------------hhc----CCc
Q 024286 103 KDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE--RTESEK---------------RLD----GKY 161 (269)
Q Consensus 103 ~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~--~~~~~~---------------~~~----~~~ 161 (269)
.... +++|+||||||.||+.++.+++. .++++|+.+|++.... ...... ... ...
T Consensus 104 ~~~~-p~~l~gHSmGg~Ia~~~~~~~~~---~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 179 (298)
T COG2267 104 DPGL-PVFLLGHSMGGLIALLYLARYPP---RIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVL 179 (298)
T ss_pred CCCC-CeEEEEeCcHHHHHHHHHHhCCc---cccEEEEECccccCChhHHHHHHHHHhcccccccccccccCcccccCcC
Confidence 1234 89999999999999999998764 4999999999998763 100000 000 000
Q ss_pred ccchHHHHHHHHHhCCCCCCCCCCCC------CCCCCCCCCcc-CCC-CCceeEEecCCCcChhHHHHHHHHHHHCCC-C
Q 024286 162 FVTVQDRDWYWRAYLPEGANRDHPAC------NPFGPKGIDLV-GVK-FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQ-D 232 (269)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~-~~P~li~~G~~D~~~~~~~~~~~~l~~~~~-~ 232 (269)
...........+.+..+..-...... ........... ... ..|+||++|++|.+++......+.++..+. +
T Consensus 180 ~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~ 259 (298)
T COG2267 180 TDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPD 259 (298)
T ss_pred cchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCC
Confidence 00000111111122111110000000 00000000111 011 349999999999998721233445555553 4
Q ss_pred eEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 233 VKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 233 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
+++++++|+.|...++.+.. .+++++++.+||.++
T Consensus 260 ~~~~~~~g~~He~~~E~~~~-r~~~~~~~~~~l~~~ 294 (298)
T COG2267 260 KELKVIPGAYHELLNEPDRA-REEVLKDILAWLAEA 294 (298)
T ss_pred ceEEecCCcchhhhcCcchH-HHHHHHHHHHHHHhh
Confidence 79999999999988775422 289999999999875
No 21
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.87 E-value=4.2e-21 Score=148.43 Aligned_cols=190 Identities=16% Similarity=0.104 Sum_probs=126.8
Q ss_pred ccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCC--CCC----------------CC
Q 024286 21 LEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE--NRY----------------PC 82 (269)
Q Consensus 21 ~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~--~~~----------------~~ 82 (269)
++.|++. ++.|+||++|+ ..|-. .....++..|+++ ||.|++||+-.... ... ..
T Consensus 5 ~~~P~~~-~~~~~Vvv~~d---~~G~~--~~~~~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (218)
T PF01738_consen 5 VARPEGG-GPRPAVVVIHD---IFGLN--PNIRDLADRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQ 77 (218)
T ss_dssp EEEETTS-SSEEEEEEE-B---TTBS---HHHHHHHHHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHH
T ss_pred EEeCCCC-CCCCEEEEEcC---CCCCc--hHHHHHHHHHHhc-CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHH
Confidence 3455555 44599999999 33333 3367889999998 99999999654332 110 11
Q ss_pred chhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcc
Q 024286 83 AYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYF 162 (269)
Q Consensus 83 ~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 162 (269)
...|+.++++++.+... ++.+ +|+++|+|+||.+|+.++.+. ..+++++.++|... ......
T Consensus 78 ~~~~~~aa~~~l~~~~~---~~~~-kig~vGfc~GG~~a~~~a~~~----~~~~a~v~~yg~~~----~~~~~~------ 139 (218)
T PF01738_consen 78 VAADLQAAVDYLRAQPE---VDPG-KIGVVGFCWGGKLALLLAARD----PRVDAAVSFYGGSP----PPPPLE------ 139 (218)
T ss_dssp HHHHHHHHHHHHHCTTT---CEEE-EEEEEEETHHHHHHHHHHCCT----TTSSEEEEES-SSS----GGGHHH------
T ss_pred HHHHHHHHHHHHHhccc---cCCC-cEEEEEEecchHHhhhhhhhc----cccceEEEEcCCCC----CCcchh------
Confidence 23456677888888764 5677 999999999999999988653 34899999999100 000000
Q ss_pred cchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHH--HHHHHHHHHCCCCeEEEEeCC
Q 024286 163 VTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQ 240 (269)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~ 240 (269)
.. ..+ .+|+++++|++|+.++.. ..+.+.+++.+.++++++|+|
T Consensus 140 -----------~~-------------------~~~----~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~g 185 (218)
T PF01738_consen 140 -----------DA-------------------PKI----KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPG 185 (218)
T ss_dssp -----------HG-------------------GG------S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT
T ss_pred -----------hh-------------------ccc----CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCC
Confidence 00 011 239999999999988753 678888989999999999999
Q ss_pred CceeeeeCCCC----chHHHHHHHHHHHhhcCC
Q 024286 241 ATIGFYFLPNN----GHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 241 ~~H~~~~~~~~----~~~~~~~~~i~~fl~~~~ 269 (269)
++|+|...... ...++.++++.+||+++|
T Consensus 186 a~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 186 AGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp --TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred CcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 99999876433 457799999999999986
No 22
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.85 E-value=1.4e-19 Score=146.84 Aligned_cols=100 Identities=16% Similarity=0.163 Sum_probs=73.1
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC-----chhhHHHHHHHHHhcccccCCCC
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC-----AYDDGWTVLKWAKSRSWLQSKDS 105 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----~~~d~~~~~~~~~~~~~~~~~~~ 105 (269)
.|+||++||.+. + ...|..++..|.+. ||.|+++|+|+++.+..+. ..++..+.+..+.+. .+.
T Consensus 46 ~~~lvliHG~~~---~--~~~w~~~~~~L~~~-gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~-----l~~ 114 (302)
T PRK00870 46 GPPVLLLHGEPS---W--SYLYRKMIPILAAA-GHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQ-----LDL 114 (302)
T ss_pred CCEEEEECCCCC---c--hhhHHHHHHHHHhC-CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-----cCC
Confidence 489999999431 2 22378888888877 9999999999998775432 123333333333333 345
Q ss_pred CccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 106 KAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 106 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
+ +++|+||||||.+|+.++.++++. ++++++++|.+
T Consensus 115 ~-~v~lvGhS~Gg~ia~~~a~~~p~~---v~~lvl~~~~~ 150 (302)
T PRK00870 115 T-DVTLVCQDWGGLIGLRLAAEHPDR---FARLVVANTGL 150 (302)
T ss_pred C-CEEEEEEChHHHHHHHHHHhChhh---eeEEEEeCCCC
Confidence 6 899999999999999999987766 99999998753
No 23
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.84 E-value=9.6e-20 Score=147.35 Aligned_cols=215 Identities=14% Similarity=0.046 Sum_probs=124.7
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC----------chhhHHHHHHHHHhccccc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC----------AYDDGWTVLKWAKSRSWLQ 101 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~----------~~~d~~~~~~~~~~~~~~~ 101 (269)
|+||++||.+. +. ..|..++..|+.+ |+|+++|+++++.+..+. ..++..+.+.-+.+.
T Consensus 30 ~~vlllHG~~~---~~--~~w~~~~~~L~~~--~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~---- 98 (294)
T PLN02824 30 PALVLVHGFGG---NA--DHWRKNTPVLAKS--HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSD---- 98 (294)
T ss_pred CeEEEECCCCC---Ch--hHHHHHHHHHHhC--CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHH----
Confidence 78999999432 33 3488889999864 799999999998875432 234433333333333
Q ss_pred CCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCC---CCchhh-------h-hcCCc--------c
Q 024286 102 SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE---RTESEK-------R-LDGKY--------F 162 (269)
Q Consensus 102 ~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~---~~~~~~-------~-~~~~~--------~ 162 (269)
...+ +++|+||||||.+|+.+|.++++. ++++|+++|...... ...... . ..... .
T Consensus 99 -l~~~-~~~lvGhS~Gg~va~~~a~~~p~~---v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (294)
T PLN02824 99 -VVGD-PAFVICNSVGGVVGLQAAVDAPEL---VRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSV 173 (294)
T ss_pred -hcCC-CeEEEEeCHHHHHHHHHHHhChhh---eeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhh
Confidence 2345 899999999999999999988776 999999987642210 000000 0 00000 0
Q ss_pred cchHHHHHHHHHhCCCC-C-------------CCCCC-----CCCCCCCCCCCccCC-C-CCceeEEecCCCcChhHHHH
Q 024286 163 VTVQDRDWYWRAYLPEG-A-------------NRDHP-----ACNPFGPKGIDLVGV-K-FPKSLVVVAGLDLIQDWQLA 221 (269)
Q Consensus 163 ~~~~~~~~~~~~~~~~~-~-------------~~~~~-----~~~~~~~~~~~~~~~-~-~~P~li~~G~~D~~~~~~~~ 221 (269)
.........+....... . ..... ..............+ + .+|+|+++|++|.+++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~- 252 (294)
T PLN02824 174 ATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVEL- 252 (294)
T ss_pred cCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHH-
Confidence 00000000000000000 0 00000 000000000000111 1 3599999999999887532
Q ss_pred HHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 222 YMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 222 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.+.+.+.....++++++++||... .+..+++.+.+.+||+++
T Consensus 253 -~~~~~~~~~~~~~~~i~~~gH~~~----~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 253 -GRAYANFDAVEDFIVLPGVGHCPQ----DEAPELVNPLIESFVARH 294 (294)
T ss_pred -HHHHHhcCCccceEEeCCCCCChh----hhCHHHHHHHHHHHHhcC
Confidence 244555555678999999999653 456899999999999875
No 24
>PRK11460 putative hydrolase; Provisional
Probab=99.84 E-value=1.2e-19 Score=141.13 Aligned_cols=170 Identities=15% Similarity=0.102 Sum_probs=110.6
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCC--CEEEeeccCCC---C-CCC-C-------CCchhh-------HHH
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCK--AVVVSVNYRRA---P-ENR-Y-------PCAYDD-------GWT 89 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g--~~v~~~d~r~~---~-~~~-~-------~~~~~d-------~~~ 89 (269)
.|+||++||.|- +.. .+..+++.|... + +.++.++-+.. + ... + .....+ +.+
T Consensus 16 ~~~vIlLHG~G~---~~~--~~~~l~~~l~~~-~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 16 QQLLLLFHGVGD---NPV--AMGEIGSWFAPA-FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CcEEEEEeCCCC---ChH--HHHHHHHHHHHH-CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHH
Confidence 389999999442 322 378888888875 5 45555542210 0 000 0 011111 223
Q ss_pred HHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHH
Q 024286 90 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRD 169 (269)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (269)
.++++.++ .+++.+ +|+|+|+|+||.+|+.++.+.++. +.+++++++.+....
T Consensus 90 ~i~~~~~~---~~~~~~-~i~l~GfS~Gg~~al~~a~~~~~~---~~~vv~~sg~~~~~~-------------------- 142 (232)
T PRK11460 90 TVRYWQQQ---SGVGAS-ATALIGFSQGAIMALEAVKAEPGL---AGRVIAFSGRYASLP-------------------- 142 (232)
T ss_pred HHHHHHHh---cCCChh-hEEEEEECHHHHHHHHHHHhCCCc---ceEEEEecccccccc--------------------
Confidence 33444333 337778 999999999999999998876543 677777776431000
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeCCCceeeee
Q 024286 170 WYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIGFYF 247 (269)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 247 (269)
. ... ..+|++++||++|.+++. +.++.+.+++.+.++++++|++++|.+.
T Consensus 143 -----------~--~~~--------------~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~- 194 (232)
T PRK11460 143 -----------E--TAP--------------TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID- 194 (232)
T ss_pred -----------c--ccc--------------CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC-
Confidence 0 000 024999999999999874 5788889999999999999999999862
Q ss_pred CCCCchHHHHHHHHHHHhhcC
Q 024286 248 LPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 248 ~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.+.++.+.+||++.
T Consensus 195 -------~~~~~~~~~~l~~~ 208 (232)
T PRK11460 195 -------PRLMQFALDRLRYT 208 (232)
T ss_pred -------HHHHHHHHHHHHHH
Confidence 45666677777654
No 25
>PLN02965 Probable pheophorbidase
Probab=99.83 E-value=1e-18 Score=138.36 Aligned_cols=214 Identities=15% Similarity=0.050 Sum_probs=121.6
Q ss_pred EEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC----chhhHHHHHHHHHhcccccCCCCCcc
Q 024286 33 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC----AYDDGWTVLKWAKSRSWLQSKDSKAH 108 (269)
Q Consensus 33 ~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~----~~~d~~~~~~~~~~~~~~~~~~~~~~ 108 (269)
.||++||.+. +.. .|...+..|++. ||.|+++|+|+++.+..+. .+++..+.+.-+.+. ++. .+ +
T Consensus 5 ~vvllHG~~~---~~~--~w~~~~~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~---l~~-~~-~ 73 (255)
T PLN02965 5 HFVFVHGASH---GAW--CWYKLATLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSD---LPP-DH-K 73 (255)
T ss_pred EEEEECCCCC---CcC--cHHHHHHHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHh---cCC-CC-C
Confidence 5999999542 333 378888999777 9999999999998775332 133333323333232 111 25 8
Q ss_pred EEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCC--chhh---h-------h---cCC-cccchHHH-HHH
Q 024286 109 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT--ESEK---R-------L---DGK-YFVTVQDR-DWY 171 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~--~~~~---~-------~---~~~-~~~~~~~~-~~~ 171 (269)
++|+||||||.+++.++.++++. ++++|++++........ .... . . ... ........ ...
T Consensus 74 ~~lvGhSmGG~ia~~~a~~~p~~---v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
T PLN02965 74 VILVGHSIGGGSVTEALCKFTDK---ISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEF 150 (255)
T ss_pred EEEEecCcchHHHHHHHHhCchh---eeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHH
Confidence 99999999999999999988766 89999988653211100 0000 0 0 000 00000000 001
Q ss_pred H-HHhCCCCC----------CCCCCCCC--CCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEe
Q 024286 172 W-RAYLPEGA----------NRDHPACN--PFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYL 238 (269)
Q Consensus 172 ~-~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~ 238 (269)
. ..+..... ........ ............ ..|+++++|++|.+++.. ..+.+.+.-.+.+++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~vP~lvi~g~~D~~~~~~--~~~~~~~~~~~a~~~~i 227 (255)
T PLN02965 151 VRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAE-KVPRVYIKTAKDNLFDPV--RQDVMVENWPPAQTYVL 227 (255)
T ss_pred HHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcC-CCCEEEEEcCCCCCCCHH--HHHHHHHhCCcceEEEe
Confidence 0 00000000 00000000 000000000011 349999999999998763 33556666566789999
Q ss_pred CCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 239 EQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 239 ~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
+++||..+ .+..+++.+.+.+|+++
T Consensus 228 ~~~GH~~~----~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 228 EDSDHSAF----FSVPTTLFQYLLQAVSS 252 (255)
T ss_pred cCCCCchh----hcCHHHHHHHHHHHHHH
Confidence 99999764 44688888888888875
No 26
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.83 E-value=1.5e-19 Score=136.47 Aligned_cols=184 Identities=20% Similarity=0.219 Sum_probs=130.5
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCC----CCchhhHHHHHHHHHhcccccCCCCCc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY----PCAYDDGWTVLKWAKSRSWLQSKDSKA 107 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~ 107 (269)
++|+|.||...-.| .+..+...|...++++|+++||++.+.++- .....|+.++++|+++... .++
T Consensus 61 ~~lly~hGNa~Dlg-----q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g----~~~- 130 (258)
T KOG1552|consen 61 PTLLYSHGNAADLG-----QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYG----SPE- 130 (258)
T ss_pred eEEEEcCCcccchH-----HHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcC----CCc-
Confidence 89999999643222 256777788887799999999998765532 2567899999999999842 567
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCC
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPAC 187 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (269)
+|+|+|+|+|...++.+|++.+ +.++|+.+|+++.......- .........
T Consensus 131 ~Iil~G~SiGt~~tv~Lasr~~-----~~alVL~SPf~S~~rv~~~~------------------------~~~~~~~d~ 181 (258)
T KOG1552|consen 131 RIILYGQSIGTVPTVDLASRYP-----LAAVVLHSPFTSGMRVAFPD------------------------TKTTYCFDA 181 (258)
T ss_pred eEEEEEecCCchhhhhHhhcCC-----cceEEEeccchhhhhhhccC------------------------cceEEeecc
Confidence 9999999999999999998753 89999999998754321110 000000000
Q ss_pred CCCCCCCCCccCCCCCceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHh
Q 024286 188 NPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFV 265 (269)
Q Consensus 188 ~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl 265 (269)
.. ..++++.. .+|+|++||++|.+++. +.++.+++++. ++-....|++|. +.+...++++.+.+|+
T Consensus 182 f~---~i~kI~~i-~~PVLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~g~gH~-----~~~~~~~yi~~l~~f~ 249 (258)
T KOG1552|consen 182 FP---NIEKISKI-TCPVLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVKGAGHN-----DIELYPEYIEHLRRFI 249 (258)
T ss_pred cc---ccCcceec-cCCEEEEecccCceecccccHHHHHhcccc---CCCcEEecCCCc-----ccccCHHHHHHHHHHH
Confidence 00 01222221 34999999999999986 47777777654 566788899996 3455678888888887
Q ss_pred h
Q 024286 266 S 266 (269)
Q Consensus 266 ~ 266 (269)
.
T Consensus 250 ~ 250 (258)
T KOG1552|consen 250 S 250 (258)
T ss_pred H
Confidence 5
No 27
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.83 E-value=5e-19 Score=141.80 Aligned_cols=227 Identities=15% Similarity=0.011 Sum_probs=126.4
Q ss_pred ccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC----chhhHHHHHH
Q 024286 17 NIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC----AYDDGWTVLK 92 (269)
Q Consensus 17 ~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~----~~~d~~~~~~ 92 (269)
..+.++....+..+.|+||++||.+. + ...|..++..|++ +|.|+++|+|+++.+..+. .+++..+.+.
T Consensus 14 ~~~~~~~~~~g~~~~~~vv~~hG~~~---~--~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~ 86 (278)
T TIGR03056 14 GPFHWHVQDMGPTAGPLLLLLHGTGA---S--THSWRDLMPPLAR--SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLS 86 (278)
T ss_pred CCEEEEEEecCCCCCCeEEEEcCCCC---C--HHHHHHHHHHHhh--CcEEEeecCCCCCCCCCccccCCCHHHHHHHHH
Confidence 34455554443333489999999432 3 2337778888865 7999999999988765432 2344444444
Q ss_pred HHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCC-----chhhhh-cCCccc---
Q 024286 93 WAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT-----ESEKRL-DGKYFV--- 163 (269)
Q Consensus 93 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~-----~~~~~~-~~~~~~--- 163 (269)
.+.+. .+.+ +++|+||||||.+|+.++.+.++. +++++++++........ +..... ......
T Consensus 87 ~~i~~-----~~~~-~~~lvG~S~Gg~~a~~~a~~~p~~---v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (278)
T TIGR03056 87 ALCAA-----EGLS-PDGVIGHSAGAAIALRLALDGPVT---PRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPM 157 (278)
T ss_pred HHHHH-----cCCC-CceEEEECccHHHHHHHHHhCCcc---cceEEEEcCcccccccccccccchhhHhhhhcccchHH
Confidence 44443 2345 899999999999999999887654 88888887654321100 000000 000000
Q ss_pred ------chHHHHHHHHH---------------hCCCCCCCC----CCCCCCCCCCCCCccCCCCCceeEEecCCCcChhH
Q 024286 164 ------TVQDRDWYWRA---------------YLPEGANRD----HPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW 218 (269)
Q Consensus 164 ------~~~~~~~~~~~---------------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~ 218 (269)
........... ......... .............+..+ ..|+++++|++|.+++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~lii~g~~D~~vp~ 236 (278)
T TIGR03056 158 MSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRI-TIPLHLIAGEEDKAVPP 236 (278)
T ss_pred HHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccC-CCCEEEEEeCCCcccCH
Confidence 00000000000 000000000 00000000000011111 24999999999999876
Q ss_pred HHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhh
Q 024286 219 QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 219 ~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~ 266 (269)
.. .+.+.+...++++.+++++||.+.. +..+++++.+.+|++
T Consensus 237 ~~--~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 237 DE--SKRAATRVPTATLHVVPGGGHLVHE----EQADGVVGLILQAAE 278 (278)
T ss_pred HH--HHHHHHhccCCeEEEECCCCCcccc----cCHHHHHHHHHHHhC
Confidence 32 2444444456789999999997643 457889999999985
No 28
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.83 E-value=1.2e-18 Score=137.66 Aligned_cols=213 Identities=16% Similarity=0.085 Sum_probs=118.3
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC----chhhHHHHHHHHHhcccccCCCCCc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC----AYDDGWTVLKWAKSRSWLQSKDSKA 107 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~----~~~d~~~~~~~~~~~~~~~~~~~~~ 107 (269)
|+||++||.+. +. ..|...+..|. + +|.|+++|+|+++.+..+. ..++..+.+..+.+. .+.+
T Consensus 14 ~~iv~lhG~~~---~~--~~~~~~~~~l~-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~-----~~~~- 80 (257)
T TIGR03611 14 PVVVLSSGLGG---SG--SYWAPQLDVLT-Q-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA-----LNIE- 80 (257)
T ss_pred CEEEEEcCCCc---ch--hHHHHHHHHHH-h-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-----hCCC-
Confidence 89999999432 32 23666776665 4 8999999999987764321 223332222222222 3456
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhh-----hcC--C-cccchHHH---H-HHHHHh
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKR-----LDG--K-YFVTVQDR---D-WYWRAY 175 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-----~~~--~-~~~~~~~~---~-~~~~~~ 175 (269)
+++|+||||||.+|+.++.+.++. ++++|+++++............ ... . ........ . .+....
T Consensus 81 ~~~l~G~S~Gg~~a~~~a~~~~~~---v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (257)
T TIGR03611 81 RFHFVGHALGGLIGLQLALRYPER---LLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISEN 157 (257)
T ss_pred cEEEEEechhHHHHHHHHHHChHH---hHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhcc
Confidence 899999999999999999887665 9999999887653221100000 000 0 00000000 0 000000
Q ss_pred CCCCCCCCCCCCCCC---------------CCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCC
Q 024286 176 LPEGANRDHPACNPF---------------GPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQ 240 (269)
Q Consensus 176 ~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~ 240 (269)
............... ......+... ..|+++++|++|.+++... .+.+.+...+.+++.+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~P~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~~ 234 (257)
T TIGR03611 158 AARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRI-QHPVLLIANRDDMLVPYTQ--SLRLAAALPNAQLKLLPY 234 (257)
T ss_pred chhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhccc-CccEEEEecCcCcccCHHH--HHHHHHhcCCceEEEECC
Confidence 000000000000000 0000011111 3499999999999987532 233444445678899999
Q ss_pred CceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 241 ATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 241 ~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
+||.+. .++.+++.+.+.+||++
T Consensus 235 ~gH~~~----~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 235 GGHASN----VTDPETFNRALLDFLKT 257 (257)
T ss_pred CCCCcc----ccCHHHHHHHHHHHhcC
Confidence 999764 34678899999999964
No 29
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.83 E-value=3.7e-19 Score=140.90 Aligned_cols=214 Identities=14% Similarity=0.071 Sum_probs=120.0
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCc--hhhH-HHHHHHHHhcccccCCCCCc
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCA--YDDG-WTVLKWAKSRSWLQSKDSKA 107 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~--~~d~-~~~~~~~~~~~~~~~~~~~~ 107 (269)
.|+||++||.+ ++. ..|..++..|+. +|.|+++|+|+++.+..+.. ..+. .++...+.. .+.+
T Consensus 16 ~~~iv~lhG~~---~~~--~~~~~~~~~l~~--~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~------l~~~- 81 (255)
T PRK10673 16 NSPIVLVHGLF---GSL--DNLGVLARDLVN--DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDA------LQIE- 81 (255)
T ss_pred CCCEEEECCCC---Cch--hHHHHHHHHHhh--CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH------cCCC-
Confidence 38999999943 232 337788888865 79999999999886643322 1222 222222222 2445
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCc--hh----hhhcCCcccchHHHHHHHHHhCC----
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTE--SE----KRLDGKYFVTVQDRDWYWRAYLP---- 177 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~---- 177 (269)
+++|+||||||.+|+.+|.+.++. +++++++++......... .. .................+.....
T Consensus 82 ~~~lvGhS~Gg~va~~~a~~~~~~---v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (255)
T PRK10673 82 KATFIGHSMGGKAVMALTALAPDR---IDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGV 158 (255)
T ss_pred ceEEEEECHHHHHHHHHHHhCHhh---cceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHH
Confidence 899999999999999999887665 999998753211110000 00 00000000000000000000000
Q ss_pred -----CCC-CCCCCCCC-----CCCCCCCCccCCC--CCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCcee
Q 024286 178 -----EGA-NRDHPACN-----PFGPKGIDLVGVK--FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIG 244 (269)
Q Consensus 178 -----~~~-~~~~~~~~-----~~~~~~~~~~~~~--~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 244 (269)
... ........ .+. ....+..+. ..|+|+++|++|..++. ...+.+.+...+++++++++++|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~G~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~ 235 (255)
T PRK10673 159 IQFLLKSFVDGEWRFNVPVLWDQYP-HIVGWEKIPAWPHPALFIRGGNSPYVTE--AYRDDLLAQFPQARAHVIAGAGHW 235 (255)
T ss_pred HHHHHhcCCcceeEeeHHHHHHhHH-HHhCCcccCCCCCCeEEEECCCCCCCCH--HHHHHHHHhCCCcEEEEeCCCCCe
Confidence 000 00000000 000 000001111 24999999999998764 334555666667899999999996
Q ss_pred eeeCCCCchHHHHHHHHHHHhhcC
Q 024286 245 FYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
... +.++++.+.+.+||+++
T Consensus 236 ~~~----~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 236 VHA----EKPDAVLRAIRRYLNDK 255 (255)
T ss_pred eec----cCHHHHHHHHHHHHhcC
Confidence 543 45788999999999864
No 30
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.83 E-value=8.9e-19 Score=135.70 Aligned_cols=192 Identities=19% Similarity=0.152 Sum_probs=144.2
Q ss_pred cccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCC--CCC----------------
Q 024286 18 IAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP--ENR---------------- 79 (269)
Q Consensus 18 ~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~--~~~---------------- 79 (269)
.--+.+|++.... |+||++|+ +.|-... ....+++|+.+ ||.|++||+-... ...
T Consensus 15 ~~~~a~P~~~~~~-P~VIv~he---i~Gl~~~--i~~~a~rlA~~-Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (236)
T COG0412 15 PAYLARPAGAGGF-PGVIVLHE---IFGLNPH--IRDVARRLAKA-GYVVLAPDLYGRQGDPTDIEDEPAELETGLVERV 87 (236)
T ss_pred eEEEecCCcCCCC-CEEEEEec---ccCCchH--HHHHHHHHHhC-CcEEEechhhccCCCCCcccccHHHHhhhhhccC
Confidence 3455667776666 99999999 3333333 78999999999 9999999955311 100
Q ss_pred -CCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhc
Q 024286 80 -YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLD 158 (269)
Q Consensus 80 -~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~ 158 (269)
......|+..+++|+..+.. .+.+ +|+++|+||||.+|+.++.+.+ .+++.++++|.........
T Consensus 88 ~~~~~~~d~~a~~~~L~~~~~---~~~~-~ig~~GfC~GG~~a~~~a~~~~----~v~a~v~fyg~~~~~~~~~------ 153 (236)
T COG0412 88 DPAEVLADIDAALDYLARQPQ---VDPK-RIGVVGFCMGGGLALLAATRAP----EVKAAVAFYGGLIADDTAD------ 153 (236)
T ss_pred CHHHHHHHHHHHHHHHHhCCC---CCCc-eEEEEEEcccHHHHHHhhcccC----CccEEEEecCCCCCCcccc------
Confidence 12345688889999988865 6788 9999999999999999998654 4999999999764322100
Q ss_pred CCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEE
Q 024286 159 GKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLL 236 (269)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~ 236 (269)
.... ..|+|+..|+.|..++. ...+.+++...+.++++.
T Consensus 154 -----------------------------------~~~~----~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~ 194 (236)
T COG0412 154 -----------------------------------APKI----KVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLE 194 (236)
T ss_pred -----------------------------------cccc----cCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEE
Confidence 0111 23999999999988775 377778888888889999
Q ss_pred EeCCCceeeeeCC-------CCchHHHHHHHHHHHhhcCC
Q 024286 237 YLEQATIGFYFLP-------NNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 237 ~~~~~~H~~~~~~-------~~~~~~~~~~~i~~fl~~~~ 269 (269)
+|+++.|+|.... +....++.++++.+|+++++
T Consensus 195 ~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 195 IYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred EeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999998542 23457789999999998764
No 31
>PRK10115 protease 2; Provisional
Probab=99.83 E-value=6.1e-19 Score=156.22 Aligned_cols=189 Identities=16% Similarity=0.136 Sum_probs=132.4
Q ss_pred CCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC-----------CCCchhhHHHHHHHHHh
Q 024286 28 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-----------YPCAYDDGWTVLKWAKS 96 (269)
Q Consensus 28 ~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----------~~~~~~d~~~~~~~~~~ 96 (269)
+++.|+||++|||-... ....|....+.|+++ ||+|+.+++|++++.. -....+|+.++++|+.+
T Consensus 442 ~~~~P~ll~~hGg~~~~---~~p~f~~~~~~l~~r-G~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~ 517 (686)
T PRK10115 442 KGHNPLLVYGYGSYGAS---IDADFSFSRLSLLDR-GFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLK 517 (686)
T ss_pred CCCCCEEEEEECCCCCC---CCCCccHHHHHHHHC-CcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHH
Confidence 34459999999965322 222256667788888 9999999999986542 22567899999999999
Q ss_pred cccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCC-----c-hhhh-hcCCcccchHHHH
Q 024286 97 RSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT-----E-SEKR-LDGKYFVTVQDRD 169 (269)
Q Consensus 97 ~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~-----~-~~~~-~~~~~~~~~~~~~ 169 (269)
+.. ++++ +++|+|.|.||+++..++.+.++. ++++|+..|+++..... + .... ...+..... ...
T Consensus 518 ~g~---~d~~-rl~i~G~S~GG~l~~~~~~~~Pdl---f~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~-~~~ 589 (686)
T PRK10115 518 LGY---GSPS-LCYGMGGSAGGMLMGVAINQRPEL---FHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDP-QYY 589 (686)
T ss_pred cCC---CChH-HeEEEEECHHHHHHHHHHhcChhh---eeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCH-HHH
Confidence 877 8999 999999999999999999887776 99999999999865321 0 0000 000011100 011
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChh--HHHHHHHHHHHCCCCeEEEEe---CCCcee
Q 024286 170 WYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYL---EQATIG 244 (269)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~---~~~~H~ 244 (269)
.++.. .+|+. .++..+.|++||+||.+|.-|+ ++.++..+|++.+.+++++++ +++||+
T Consensus 590 ~~l~~------------~SP~~----~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 590 EYMKS------------YSPYD----NVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred HHHHH------------cCchh----ccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Confidence 11111 22221 1122225558899999998776 468999999999988888888 999998
No 32
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.82 E-value=7.4e-19 Score=135.19 Aligned_cols=114 Identities=13% Similarity=0.118 Sum_probs=80.5
Q ss_pred cccccCCCCCcccEEEEEcCCccccCCCCchhhH--HHHHHHhhcCCCEEEeeccCCCCCCC-------------CCCch
Q 024286 20 ELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYD--ILCRRLVGTCKAVVVSVNYRRAPENR-------------YPCAY 84 (269)
Q Consensus 20 ~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~--~~~~~l~~~~g~~v~~~d~r~~~~~~-------------~~~~~ 84 (269)
.+|.|++..+++|+||++||++.. ... +. ..+..++++.||.|++||++++.... .....
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~---~~~--~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~ 76 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQT---ASA--YVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEV 76 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCC---HHH--HhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccH
Confidence 355665544456999999997642 111 11 11334555559999999999754211 11234
Q ss_pred hhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 85 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
.|+.+.++++.++.. ++++ +++|+|+||||.+|+.++.++++. +.+++.+++..
T Consensus 77 ~~~~~~i~~~~~~~~---id~~-~i~l~G~S~Gg~~a~~~a~~~p~~---~~~~~~~~g~~ 130 (212)
T TIGR01840 77 ESLHQLIDAVKANYS---IDPN-RVYVTGLSAGGGMTAVLGCTYPDV---FAGGASNAGLP 130 (212)
T ss_pred HHHHHHHHHHHHhcC---cChh-heEEEEECHHHHHHHHHHHhCchh---heEEEeecCCc
Confidence 667788888877543 8889 999999999999999999987765 88888888765
No 33
>PLN00021 chlorophyllase
Probab=99.82 E-value=2e-18 Score=139.12 Aligned_cols=192 Identities=18% Similarity=0.201 Sum_probs=125.8
Q ss_pred CCccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHH
Q 024286 15 RPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWA 94 (269)
Q Consensus 15 ~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~ 94 (269)
++..+.++.|.... ++|+||++||+++ ... .|..+++.|++. ||.|+++|+++..........+|..++++|+
T Consensus 37 ~~~p~~v~~P~~~g-~~PvVv~lHG~~~---~~~--~y~~l~~~Las~-G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l 109 (313)
T PLN00021 37 PPKPLLVATPSEAG-TYPVLLFLHGYLL---YNS--FYSQLLQHIASH-GFIVVAPQLYTLAGPDGTDEIKDAAAVINWL 109 (313)
T ss_pred CCceEEEEeCCCCC-CCCEEEEECCCCC---Ccc--cHHHHHHHHHhC-CCEEEEecCCCcCCCCchhhHHHHHHHHHHH
Confidence 56678889997654 4599999999654 222 378889999988 9999999977643333344567788889998
Q ss_pred Hhcccc-----cCCCCCccEEEeecCchHHHHHHHHHHhhhcc--ccccceeeeCCccCCCCCCchhhhhcCCcccchHH
Q 024286 95 KSRSWL-----QSKDSKAHIYLAGDSSGGNIVHHVALRAVESE--VEILGNILLNPMFGGQERTESEKRLDGKYFVTVQD 167 (269)
Q Consensus 95 ~~~~~~-----~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~--~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (269)
.+.... ...+.+ +++|+||||||.+|+.+|.+.++.. ..+++++++.|+........ ....
T Consensus 110 ~~~l~~~l~~~~~~d~~-~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~-----~~p~------ 177 (313)
T PLN00021 110 SSGLAAVLPEGVRPDLS-KLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQ-----TPPP------ 177 (313)
T ss_pred HhhhhhhcccccccChh-heEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccC-----CCCc------
Confidence 864221 125667 9999999999999999998875432 35899999999864321100 0000
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCc-----Ch----hHHHHHHHHHHHCCCCeEEEEe
Q 024286 168 RDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDL-----IQ----DWQLAYMEGLKKAGQDVKLLYL 238 (269)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~-----~~----~~~~~~~~~l~~~~~~~~~~~~ 238 (269)
...+......+ ..|+|++.+..|. ++ +....-.+.+.+...+..+.+.
T Consensus 178 -------------------il~~~~~s~~~----~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~ 234 (313)
T PLN00021 178 -------------------VLTYAPHSFNL----DIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVA 234 (313)
T ss_pred -------------------ccccCcccccC----CCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeee
Confidence 00000001111 2399999999663 22 2333323444555567889999
Q ss_pred CCCceeeeeC
Q 024286 239 EQATIGFYFL 248 (269)
Q Consensus 239 ~~~~H~~~~~ 248 (269)
++.+|.-.+.
T Consensus 235 ~~~gH~~~~~ 244 (313)
T PLN00021 235 KDYGHMDMLD 244 (313)
T ss_pred cCCCcceeec
Confidence 9999975543
No 34
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.82 E-value=7.1e-19 Score=140.98 Aligned_cols=213 Identities=15% Similarity=0.041 Sum_probs=120.7
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCc---hhhHHHHHHHHHhcccccCCCCCcc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCA---YDDGWTVLKWAKSRSWLQSKDSKAH 108 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~ 108 (269)
+.||++||.+. +. ..|..++..|.. +|.|+++|+|+++.+..+.. .++..+.+.-+.+. .+.+ +
T Consensus 26 ~plvllHG~~~---~~--~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~-----l~~~-~ 92 (276)
T TIGR02240 26 TPLLIFNGIGA---NL--ELVFPFIEALDP--DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDY-----LDYG-Q 92 (276)
T ss_pred CcEEEEeCCCc---ch--HHHHHHHHHhcc--CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHH-----hCcC-c
Confidence 78999999332 32 347888888765 79999999999988754422 23333333333333 3445 8
Q ss_pred EEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCC--Cchhh-hhcC-Ccccch----HH-HHHH--------
Q 024286 109 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQER--TESEK-RLDG-KYFVTV----QD-RDWY-------- 171 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~--~~~~~-~~~~-~~~~~~----~~-~~~~-------- 171 (269)
+.|+||||||.+|+.+|.+.++. ++++|+.++....... .+... .... ...... .. ...+
T Consensus 93 ~~LvG~S~GG~va~~~a~~~p~~---v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (276)
T TIGR02240 93 VNAIGVSWGGALAQQFAHDYPER---CKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDP 169 (276)
T ss_pred eEEEEECHHHHHHHHHHHHCHHH---hhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccc
Confidence 99999999999999999988776 9999999987642110 00000 0000 000000 00 0000
Q ss_pred --HHHhCCCCCC-CCCCCC----CCCCC-CCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCce
Q 024286 172 --WRAYLPEGAN-RDHPAC----NPFGP-KGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATI 243 (269)
Q Consensus 172 --~~~~~~~~~~-~~~~~~----~~~~~-~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H 243 (269)
...+...... ...... ..... ....+..+ ..|+|+++|++|.+++... .+.+.+.-.+.+++++++ ||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~~v~~~~--~~~l~~~~~~~~~~~i~~-gH 245 (276)
T TIGR02240 170 ELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKI-QQPTLVLAGDDDPIIPLIN--MRLLAWRIPNAELHIIDD-GH 245 (276)
T ss_pred hhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcC-CCCEEEEEeCCCCcCCHHH--HHHHHHhCCCCEEEEEcC-CC
Confidence 0000000000 000000 00000 00111111 3499999999999987632 244444445678888886 99
Q ss_pred eeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 244 GFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
... .+..+++.+.+.+|+++.
T Consensus 246 ~~~----~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 246 LFL----ITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred chh----hccHHHHHHHHHHHHHHh
Confidence 653 446889999999999863
No 35
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.81 E-value=9e-19 Score=135.06 Aligned_cols=114 Identities=19% Similarity=0.225 Sum_probs=81.5
Q ss_pred CCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCC
Q 024286 102 SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGAN 181 (269)
Q Consensus 102 ~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (269)
+++++ +|+|+|+|+||.+|+.++.+.+.. +.|++++++++.........
T Consensus 101 ~i~~~-ri~l~GFSQGa~~al~~~l~~p~~---~~gvv~lsG~~~~~~~~~~~--------------------------- 149 (216)
T PF02230_consen 101 GIDPS-RIFLGGFSQGAAMALYLALRYPEP---LAGVVALSGYLPPESELEDR--------------------------- 149 (216)
T ss_dssp T--GG-GEEEEEETHHHHHHHHHHHCTSST---SSEEEEES---TTGCCCHCC---------------------------
T ss_pred CCChh-heehhhhhhHHHHHHHHHHHcCcC---cCEEEEeecccccccccccc---------------------------
Confidence 47888 999999999999999999987665 99999999987533211000
Q ss_pred CCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHH
Q 024286 182 RDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMD 259 (269)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 259 (269)
.......|++++||++|+++|. ++...+.|++.+.+++++.|+|++|.. ..+.+.
T Consensus 150 ---------------~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i--------~~~~~~ 206 (216)
T PF02230_consen 150 ---------------PEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI--------SPEELR 206 (216)
T ss_dssp ---------------HCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHH
T ss_pred ---------------ccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC--------CHHHHH
Confidence 0000023999999999999885 578888999999999999999999975 477889
Q ss_pred HHHHHhhcCC
Q 024286 260 EISNFVSCNY 269 (269)
Q Consensus 260 ~i~~fl~~~~ 269 (269)
++.+||++++
T Consensus 207 ~~~~~l~~~~ 216 (216)
T PF02230_consen 207 DLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHH-
T ss_pred HHHHHHhhhC
Confidence 9999999864
No 36
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.81 E-value=5e-18 Score=136.45 Aligned_cols=213 Identities=16% Similarity=0.071 Sum_probs=117.0
Q ss_pred cEEEEEcCCccccCCCCc-hhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC--chh--hHHHHHHHHHhcccccCCCCC
Q 024286 32 PVIIFFHGGSFAHSSANS-AIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC--AYD--DGWTVLKWAKSRSWLQSKDSK 106 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~-~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~--~~~--d~~~~~~~~~~~~~~~~~~~~ 106 (269)
|.||++||.+. +... ..+...+..++.. ||.|+++|+|+++.+..+. ... ...+.+..+.+. .+.+
T Consensus 31 ~~ivllHG~~~---~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~-----l~~~ 101 (282)
T TIGR03343 31 EAVIMLHGGGP---GAGGWSNYYRNIGPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA-----LDIE 101 (282)
T ss_pred CeEEEECCCCC---chhhHHHHHHHHHHHHhC-CCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHH-----cCCC
Confidence 78999999442 2221 1112334566666 9999999999998875431 111 112222222232 3556
Q ss_pred ccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCC---Cc--h---hhhh-cCCc----------------
Q 024286 107 AHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQER---TE--S---EKRL-DGKY---------------- 161 (269)
Q Consensus 107 ~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~---~~--~---~~~~-~~~~---------------- 161 (269)
+++++||||||.+++.++.++++. ++++|+++|....... .+ . .... ....
T Consensus 102 -~~~lvG~S~Gg~ia~~~a~~~p~~---v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (282)
T TIGR03343 102 -KAHLVGNSMGGATALNFALEYPDR---IGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQS 177 (282)
T ss_pred -CeeEEEECchHHHHHHHHHhChHh---hceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcc
Confidence 999999999999999999988776 9999999875321100 00 0 0000 0000
Q ss_pred ccchHHHHHHHHHhCCCCC--------CCCCCC-CCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCC
Q 024286 162 FVTVQDRDWYWRAYLPEGA--------NRDHPA-CNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQD 232 (269)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~ 232 (269)
..........+........ ...... ..........+ ..|+|+++|++|.+++.. ..+.+.+.-.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----~~Pvlli~G~~D~~v~~~--~~~~~~~~~~~ 251 (282)
T TIGR03343 178 LITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEI----KAKTLVTWGRDDRFVPLD--HGLKLLWNMPD 251 (282)
T ss_pred cCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhC----CCCEEEEEccCCCcCCch--hHHHHHHhCCC
Confidence 0000000000000000000 000000 00000001112 349999999999988752 22344444457
Q ss_pred eEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 233 VKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 233 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
+++++++++||... .+..+++.+.+.+||++
T Consensus 252 ~~~~~i~~agH~~~----~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 252 AQLHVFSRCGHWAQ----WEHADAFNRLVIDFLRN 282 (282)
T ss_pred CEEEEeCCCCcCCc----ccCHHHHHHHHHHHhhC
Confidence 89999999999754 45688899999999863
No 37
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.81 E-value=1.8e-18 Score=138.12 Aligned_cols=228 Identities=16% Similarity=0.182 Sum_probs=128.0
Q ss_pred cccccCCCCCcccEEEEEcCCc-cccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCC-----CCchhhHHHHHHH
Q 024286 20 ELEKPVSSEVVVPVIIFFHGGS-FAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY-----PCAYDDGWTVLKW 93 (269)
Q Consensus 20 ~~~~p~~~~~~~p~vv~~HGgg-~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-----~~~~~d~~~~~~~ 93 (269)
.++.|.+.++ +.||++|||. +..|+.. .+..+++.|+++ ||.|+++|+++++.+.- ....+|+.+++++
T Consensus 17 ~~~~p~~~~~--~~vv~i~gg~~~~~g~~~--~~~~la~~l~~~-G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~ 91 (274)
T TIGR03100 17 VLHIPGASHT--TGVLIVVGGPQYRVGSHR--QFVLLARRLAEA-GFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDA 91 (274)
T ss_pred EEEcCCCCCC--CeEEEEeCCccccCCchh--HHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 4556654433 4566666643 3333332 256778899888 99999999999886532 2234688889998
Q ss_pred HHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHH
Q 024286 94 AKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWR 173 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (269)
+.+.. ...+ +++++||||||.+++.++... ..++++|+++|++.......... .. ..+........+|.
T Consensus 92 l~~~~----~g~~-~i~l~G~S~Gg~~a~~~a~~~----~~v~~lil~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 160 (274)
T TIGR03100 92 FREAA----PHLR-RIVAWGLCDAASAALLYAPAD----LRVAGLVLLNPWVRTEAAQAASR-IR-HYYLGQLLSADFWR 160 (274)
T ss_pred HHhhC----CCCC-cEEEEEECHHHHHHHHHhhhC----CCccEEEEECCccCCcccchHHH-HH-HHHHHHHhChHHHH
Confidence 87652 1235 899999999999999887642 34999999999865322111100 00 00000000001111
Q ss_pred HhCCCCCC------------------CCCCCCCCCCCC-CCCccCCCCCceeEEecCCCcChhHHHH---HHHHHHH--C
Q 024286 174 AYLPEGAN------------------RDHPACNPFGPK-GIDLVGVKFPKSLVVVAGLDLIQDWQLA---YMEGLKK--A 229 (269)
Q Consensus 174 ~~~~~~~~------------------~~~~~~~~~~~~-~~~~~~~~~~P~li~~G~~D~~~~~~~~---~~~~l~~--~ 229 (269)
........ ............ ...+... ..|+|+++|+.|...+.... +.....+ .
T Consensus 161 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~ 239 (274)
T TIGR03100 161 KLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERF-QGPVLFILSGNDLTAQEFADSVLGEPAWRGALE 239 (274)
T ss_pred HhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhc-CCcEEEEEcCcchhHHHHHHHhccChhhHHHhh
Confidence 11100000 000000000000 0111111 34999999999987643211 0022222 1
Q ss_pred CCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 230 GQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 230 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
..++++..+++++|.+... +..+++.+.|.+||++
T Consensus 240 ~~~v~~~~~~~~~H~l~~e---~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 240 DPGIERVEIDGADHTFSDR---VWREWVAARTTEWLRR 274 (274)
T ss_pred cCCeEEEecCCCCcccccH---HHHHHHHHHHHHHHhC
Confidence 2578999999999965333 3568899999999963
No 38
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.80 E-value=2.9e-18 Score=134.76 Aligned_cols=212 Identities=13% Similarity=0.077 Sum_probs=117.6
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC---chhhHHHHHHHHHhcccccCCCCCcc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC---AYDDGWTVLKWAKSRSWLQSKDSKAH 108 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~---~~~d~~~~~~~~~~~~~~~~~~~~~~ 108 (269)
|+||++||.|. +.. .|..+++.|. . ||.|+++|+++++.+..+. ...+..+.+..+.+. .+.+ +
T Consensus 14 ~~li~~hg~~~---~~~--~~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~-----~~~~-~ 80 (251)
T TIGR02427 14 PVLVFINSLGT---DLR--MWDPVLPALT-P-DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH-----LGIE-R 80 (251)
T ss_pred CeEEEEcCccc---chh--hHHHHHHHhh-c-ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----hCCC-c
Confidence 89999999442 222 3677777775 4 8999999999988764332 233433333333333 3456 8
Q ss_pred EEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCC-cccchHHHHHHHHHhCCCCCCCC----
Q 024286 109 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGK-YFVTVQDRDWYWRAYLPEGANRD---- 183 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---- 183 (269)
++++||||||.+|+.+|.+.++. +++++++++................. ..............+........
T Consensus 81 v~liG~S~Gg~~a~~~a~~~p~~---v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (251)
T TIGR02427 81 AVFCGLSLGGLIAQGLAARRPDR---VRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPAR 157 (251)
T ss_pred eEEEEeCchHHHHHHHHHHCHHH---hHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHH
Confidence 99999999999999999887665 89999887654322110000000000 00000000000000000000000
Q ss_pred -----------C----CCC-CCCCC--CCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceee
Q 024286 184 -----------H----PAC-NPFGP--KGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGF 245 (269)
Q Consensus 184 -----------~----~~~-~~~~~--~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 245 (269)
. ... ..+.. ....+... ..|+++++|++|.+++... .+.+.+...+.+++++++++|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Pvlii~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~~~gH~~ 234 (251)
T TIGR02427 158 LDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAI-AVPTLCIAGDQDGSTPPEL--VREIADLVPGARFAEIRGAGHIP 234 (251)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhc-CCCeEEEEeccCCcCChHH--HHHHHHhCCCceEEEECCCCCcc
Confidence 0 000 00000 00001111 2499999999999987632 23333333457899999999976
Q ss_pred eeCCCCchHHHHHHHHHHHhh
Q 024286 246 YFLPNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~fl~ 266 (269)
.. +..+++.+.+.+||+
T Consensus 235 ~~----~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 235 CV----EQPEAFNAALRDFLR 251 (251)
T ss_pred cc----cChHHHHHHHHHHhC
Confidence 43 357888888988874
No 39
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.80 E-value=2.6e-18 Score=142.42 Aligned_cols=215 Identities=14% Similarity=0.061 Sum_probs=121.2
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC----chhhHHHHHHHHHhcccccCCCCCc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC----AYDDGWTVLKWAKSRSWLQSKDSKA 107 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~----~~~d~~~~~~~~~~~~~~~~~~~~~ 107 (269)
|+||++||.+. + ...|..++..|+. +|.|+++|+++++.+..+. ..++..+.+.-+.+. ...+
T Consensus 89 p~lvllHG~~~---~--~~~w~~~~~~L~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~-----l~~~- 155 (360)
T PLN02679 89 PPVLLVHGFGA---S--IPHWRRNIGVLAK--NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEE-----VVQK- 155 (360)
T ss_pred CeEEEECCCCC---C--HHHHHHHHHHHhc--CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHH-----hcCC-
Confidence 78999999442 2 2347888888764 8999999999998775432 123332222222222 2445
Q ss_pred cEEEeecCchHHHHHHHHHH-hhhccccccceeeeCCccCCCCCC--chhhh-h-----------cCCccc---------
Q 024286 108 HIYLAGDSSGGNIVHHVALR-AVESEVEILGNILLNPMFGGQERT--ESEKR-L-----------DGKYFV--------- 163 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~-~~~~~~~~~~~i~~~p~~~~~~~~--~~~~~-~-----------~~~~~~--------- 163 (269)
+++|+||||||.+|+.++.. .++. ++++|++++........ ..... . ......
T Consensus 156 ~~~lvGhS~Gg~ia~~~a~~~~P~r---V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (360)
T PLN02679 156 PTVLIGNSVGSLACVIAASESTRDL---VRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVK 232 (360)
T ss_pred CeEEEEECHHHHHHHHHHHhcChhh---cCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhc
Confidence 89999999999999988864 4555 99999998754221100 00000 0 000000
Q ss_pred chHHHHHHHHHhCCCCC--------------CCCCCC---CCCCC----CC-CCCccCCCCCceeEEecCCCcChhHHH-
Q 024286 164 TVQDRDWYWRAYLPEGA--------------NRDHPA---CNPFG----PK-GIDLVGVKFPKSLVVVAGLDLIQDWQL- 220 (269)
Q Consensus 164 ~~~~~~~~~~~~~~~~~--------------~~~~~~---~~~~~----~~-~~~~~~~~~~P~li~~G~~D~~~~~~~- 220 (269)
........+........ ...... ..... .. ...+..+ ..|+|+++|++|.+++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PtLii~G~~D~~~p~~~~ 311 (360)
T PLN02679 233 QRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRI-SLPILVLWGDQDPFTPLDGP 311 (360)
T ss_pred CHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhc-CCCEEEEEeCCCCCcCchhh
Confidence 00000000000000000 000000 00000 00 0001111 3499999999999887532
Q ss_pred --HHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 221 --AYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 221 --~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
.+.+.+.+.-.++++++++++||.. ..+.++++.+.+.+||++
T Consensus 312 ~~~~~~~l~~~ip~~~l~~i~~aGH~~----~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 312 VGKYFSSLPSQLPNVTLYVLEGVGHCP----HDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred HHHHHHhhhccCCceEEEEcCCCCCCc----cccCHHHHHHHHHHHHHh
Confidence 2445565555678999999999964 345789999999999985
No 40
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.80 E-value=9.1e-18 Score=133.10 Aligned_cols=211 Identities=10% Similarity=-0.023 Sum_probs=121.0
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 111 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l 111 (269)
|.||++||.|. +. ..|..++..|.+ .|.|+++|+|+++.+..+. ..+..+.++.+.+. ..+ ++.+
T Consensus 14 ~~ivllHG~~~---~~--~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~~~------~~~-~~~l 78 (256)
T PRK10349 14 VHLVLLHGWGL---NA--EVWRCIDEELSS--HFTLHLVDLPGFGRSRGFG-ALSLADMAEAVLQQ------APD-KAIW 78 (256)
T ss_pred CeEEEECCCCC---Ch--hHHHHHHHHHhc--CCEEEEecCCCCCCCCCCC-CCCHHHHHHHHHhc------CCC-CeEE
Confidence 57999999442 32 337888888865 6999999999998775443 23445555555543 346 8999
Q ss_pred eecCchHHHHHHHHHHhhhccccccceeeeCCccCCCC--CCchh--h---hhcC-CcccchHHHHHHHHH-hCCCCC--
Q 024286 112 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE--RTESE--K---RLDG-KYFVTVQDRDWYWRA-YLPEGA-- 180 (269)
Q Consensus 112 ~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~--~~~~~--~---~~~~-~~~~~~~~~~~~~~~-~~~~~~-- 180 (269)
+||||||.+|+.+|.+.++. ++++|++++...... ..... . .... ...........+... ......
T Consensus 79 vGhS~Gg~ia~~~a~~~p~~---v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T PRK10349 79 LGWSLGGLVASQIALTHPER---VQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETAR 155 (256)
T ss_pred EEECHHHHHHHHHHHhChHh---hheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHH
Confidence 99999999999999887766 999999876432111 00000 0 0000 000000000011000 000000
Q ss_pred -----------CCCCCCCCC------CCCCCCCccCCC--CCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCC
Q 024286 181 -----------NRDHPACNP------FGPKGIDLVGVK--FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQA 241 (269)
Q Consensus 181 -----------~~~~~~~~~------~~~~~~~~~~~~--~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 241 (269)
....+.... .....+....+. ..|+|+++|++|.+++.. ..+.+.+.-.+.++++++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~--~~~~~~~~i~~~~~~~i~~~ 233 (256)
T PRK10349 156 QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRK--VVPMLDKLWPHSESYIFAKA 233 (256)
T ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHH--HHHHHHHhCCCCeEEEeCCC
Confidence 000000000 000000111111 359999999999988753 23455555567899999999
Q ss_pred ceeeeeCCCCchHHHHHHHHHHHhh
Q 024286 242 TIGFYFLPNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 242 ~H~~~~~~~~~~~~~~~~~i~~fl~ 266 (269)
||... .+.++.+.+.+.+|-+
T Consensus 234 gH~~~----~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 234 AHAPF----ISHPAEFCHLLVALKQ 254 (256)
T ss_pred CCCcc----ccCHHHHHHHHHHHhc
Confidence 99654 4467888888888754
No 41
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.80 E-value=3.2e-18 Score=123.77 Aligned_cols=145 Identities=21% Similarity=0.185 Sum_probs=102.8
Q ss_pred EEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEEe
Q 024286 33 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLA 112 (269)
Q Consensus 33 ~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~ 112 (269)
+||++||++. + ...|..+++.|++. ||.|+.+|+++.+.. ....+..++++++.+.. .+.+ +++++
T Consensus 1 ~vv~~HG~~~---~--~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~-~i~l~ 66 (145)
T PF12695_consen 1 VVVLLHGWGG---S--RRDYQPLAEALAEQ-GYAVVAFDYPGHGDS---DGADAVERVLADIRAGY----PDPD-RIILI 66 (145)
T ss_dssp EEEEECTTTT---T--THHHHHHHHHHHHT-TEEEEEESCTTSTTS---HHSHHHHHHHHHHHHHH----CTCC-EEEEE
T ss_pred CEEEECCCCC---C--HHHHHHHHHHHHHC-CCEEEEEecCCCCcc---chhHHHHHHHHHHHhhc----CCCC-cEEEE
Confidence 6899999653 3 23378999999999 999999999987665 33446677777764321 3667 99999
Q ss_pred ecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 024286 113 GDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGP 192 (269)
Q Consensus 113 G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (269)
|||+||.+++.++.+. ..++++|+++|+.+ ... .
T Consensus 67 G~S~Gg~~a~~~~~~~----~~v~~~v~~~~~~~-------~~~------------------~----------------- 100 (145)
T PF12695_consen 67 GHSMGGAIAANLAARN----PRVKAVVLLSPYPD-------SED------------------L----------------- 100 (145)
T ss_dssp EETHHHHHHHHHHHHS----TTESEEEEESESSG-------CHH------------------H-----------------
T ss_pred EEccCcHHHHHHhhhc----cceeEEEEecCccc-------hhh------------------h-----------------
Confidence 9999999999999864 34999999999411 000 0
Q ss_pred CCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCcee
Q 024286 193 KGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIG 244 (269)
Q Consensus 193 ~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 244 (269)
... ..|+++++|++|.+++.. ...+..++...+.++++++|++|+
T Consensus 101 --~~~----~~pv~~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 101 --AKI----RIPVLFIHGENDPLVPPE-QVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp --TTT----TSEEEEEEETT-SSSHHH-HHHHHHHHHCSSEEEEEETTS-TT
T ss_pred --hcc----CCcEEEEEECCCCcCCHH-HHHHHHHHcCCCcEEEEeCCCcCc
Confidence 000 129999999999998752 222333333367899999999993
No 42
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.79 E-value=2.9e-18 Score=134.57 Aligned_cols=212 Identities=17% Similarity=0.122 Sum_probs=120.5
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCc--hhhHHHH----HHHHHhcccccCCCC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCA--YDDGWTV----LKWAKSRSWLQSKDS 105 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~--~~d~~~~----~~~~~~~~~~~~~~~ 105 (269)
|+||++||.+. +.. .|..++..|+ + ||.|+++|+|+++.+..+.. ..+..+. +..+.+. .+.
T Consensus 2 ~~vv~~hG~~~---~~~--~~~~~~~~L~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 69 (251)
T TIGR03695 2 PVLVFLHGFLG---SGA--DWQALIELLG-P-HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQ-----LGI 69 (251)
T ss_pred CEEEEEcCCCC---chh--hHHHHHHHhc-c-cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHH-----cCC
Confidence 78999999432 333 3788888888 5 99999999999887654321 2233333 3444343 345
Q ss_pred CccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCc-----c------------------
Q 024286 106 KAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKY-----F------------------ 162 (269)
Q Consensus 106 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~-----~------------------ 162 (269)
+ +++|+|||+||.+|+.++.+.++. ++++++.++.................. +
T Consensus 70 ~-~~~l~G~S~Gg~ia~~~a~~~~~~---v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (251)
T TIGR03695 70 E-PFFLVGYSMGGRIALYYALQYPER---VQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLF 145 (251)
T ss_pred C-eEEEEEeccHHHHHHHHHHhCchh---eeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCcee
Confidence 6 999999999999999999987665 999999987654322110000000000 0
Q ss_pred -----cchHHHHHHHHHhCCCCCCCCCCC--CCCCCCCCCCccCC-C-CCceeEEecCCCcChhHHHHHHHHHHHCCCCe
Q 024286 163 -----VTVQDRDWYWRAYLPEGANRDHPA--CNPFGPKGIDLVGV-K-FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDV 233 (269)
Q Consensus 163 -----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~-~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~ 233 (269)
........................ .............. + .+|+++++|++|..++. ..+.+.+...++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~---~~~~~~~~~~~~ 222 (251)
T TIGR03695 146 ASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQ---IAKEMQKLLPNL 222 (251)
T ss_pred eecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHH---HHHHHHhcCCCC
Confidence 000000000000000000000000 00000000000000 1 35999999999986642 234556666678
Q ss_pred EEEEeCCCceeeeeCCCCchHHHHHHHHHHHhh
Q 024286 234 KLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 234 ~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~ 266 (269)
++++++++||.... +..+++.+.+.+||+
T Consensus 223 ~~~~~~~~gH~~~~----e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 223 TLVIIANAGHNIHL----ENPEAFAKILLAFLE 251 (251)
T ss_pred cEEEEcCCCCCcCc----cChHHHHHHHHHHhC
Confidence 99999999997643 346888889999984
No 43
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.79 E-value=3e-18 Score=138.71 Aligned_cols=98 Identities=16% Similarity=0.236 Sum_probs=72.4
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCc---hhhHHHHHHHHHhcccccCCCCCcc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCA---YDDGWTVLKWAKSRSWLQSKDSKAH 108 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~ 108 (269)
|.||++||.+ ++. ..|..+++.|+.+ +.|+++|+|+++.++.+.. ..+..+.+..+.+. ++.+ +
T Consensus 28 ~~vvllHG~~---~~~--~~w~~~~~~L~~~--~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~-----l~~~-~ 94 (295)
T PRK03592 28 DPIVFLHGNP---TSS--YLWRNIIPHLAGL--GRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA-----LGLD-D 94 (295)
T ss_pred CEEEEECCCC---CCH--HHHHHHHHHHhhC--CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----hCCC-C
Confidence 7999999943 233 3378888899876 4999999999988765432 23333333333333 3446 9
Q ss_pred EEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 109 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
++|+||||||.+|+.++.++++. ++++|++++..
T Consensus 95 ~~lvGhS~Gg~ia~~~a~~~p~~---v~~lil~~~~~ 128 (295)
T PRK03592 95 VVLVGHDWGSALGFDWAARHPDR---VRGIAFMEAIV 128 (295)
T ss_pred eEEEEECHHHHHHHHHHHhChhh---eeEEEEECCCC
Confidence 99999999999999999998876 99999999754
No 44
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=3.2e-18 Score=152.20 Aligned_cols=219 Identities=15% Similarity=0.144 Sum_probs=149.1
Q ss_pred ccccccCC--CCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCC-----------CCchh
Q 024286 19 AELEKPVS--SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY-----------PCAYD 85 (269)
Q Consensus 19 ~~~~~p~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-----------~~~~~ 85 (269)
+.+..|++ ..+++|+|+.+|||.. ...........+...++...|++|+.+|+|+++.... ...++
T Consensus 512 ~~~~lP~~~~~~~kyPllv~~yGGP~-sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~ 590 (755)
T KOG2100|consen 512 AILILPPNFDPSKKYPLLVVVYGGPG-SQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVK 590 (755)
T ss_pred EEEecCCCCCCCCCCCEEEEecCCCC-cceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchH
Confidence 34556665 4468899999999874 1111111123334455666699999999998865321 13467
Q ss_pred hHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccch
Q 024286 86 DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTV 165 (269)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~ 165 (269)
|...+++++.+... +|.+ ||+|+|+|.||++++.++.+.+ +.-++|.++.+|+.+...........
T Consensus 591 D~~~~~~~~~~~~~---iD~~-ri~i~GwSyGGy~t~~~l~~~~--~~~fkcgvavaPVtd~~~yds~~ter-------- 656 (755)
T KOG2100|consen 591 DQIEAVKKVLKLPF---IDRS-RVAIWGWSYGGYLTLKLLESDP--GDVFKCGVAVAPVTDWLYYDSTYTER-------- 656 (755)
T ss_pred HHHHHHHHHHhccc---ccHH-HeEEeccChHHHHHHHHhhhCc--CceEEEEEEecceeeeeeecccccHh--------
Confidence 88889999988875 9999 9999999999999999998754 23589999999999877322211111
Q ss_pred HHHHHHHHHhCCCCCCCC--CCCCCCCCCCCCCccCCCCCceeEEecCCCcCh--hHHHHHHHHHHHCCCCeEEEEeCCC
Q 024286 166 QDRDWYWRAYLPEGANRD--HPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQ--DWQLAYMEGLKKAGQDVKLLYLEQA 241 (269)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l~~~~~~~~~~~~~~~ 241 (269)
+++...... +...++ ......++ .+-.|++||+.|.-+ +++..+.++|+.+|+++++.+||+.
T Consensus 657 ---------ymg~p~~~~~~y~e~~~-~~~~~~~~---~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde 723 (755)
T KOG2100|consen 657 ---------YMGLPSENDKGYEESSV-SSPANNIK---TPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDE 723 (755)
T ss_pred ---------hcCCCccccchhhhccc-cchhhhhc---cCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCC
Confidence 111111100 111111 11112222 334699999999776 6679999999999999999999999
Q ss_pred ceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 242 TIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 242 ~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.|++... +....+...+..|++..
T Consensus 724 ~H~is~~---~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 724 NHGISYV---EVISHLYEKLDRFLRDC 747 (755)
T ss_pred Ccccccc---cchHHHHHHHHHHHHHH
Confidence 9997532 23577888999999854
No 45
>PRK10985 putative hydrolase; Provisional
Probab=99.79 E-value=4.4e-18 Score=139.20 Aligned_cols=107 Identities=17% Similarity=0.212 Sum_probs=78.2
Q ss_pred cccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCC-------CCchhhHHHHHHHHHhcccccC
Q 024286 30 VVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY-------PCAYDDGWTVLKWAKSRSWLQS 102 (269)
Q Consensus 30 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~ 102 (269)
+.|+||++||.+ ++.....+..+++.|+++ ||.|+++|||+++..+- ....+|+..+++++.+.
T Consensus 57 ~~p~vll~HG~~---g~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~----- 127 (324)
T PRK10985 57 HKPRLVLFHGLE---GSFNSPYAHGLLEAAQKR-GWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQRE----- 127 (324)
T ss_pred CCCEEEEeCCCC---CCCcCHHHHHHHHHHHHC-CCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHh-----
Confidence 349999999932 233333345677888887 99999999999765421 13468899999999886
Q ss_pred CCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCC
Q 024286 103 KDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 147 (269)
Q Consensus 103 ~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~ 147 (269)
.... +++++||||||.+++.++.+..+. ..+.+++++++..+.
T Consensus 128 ~~~~-~~~~vG~S~GG~i~~~~~~~~~~~-~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 128 FGHV-PTAAVGYSLGGNMLACLLAKEGDD-LPLDAAVIVSAPLML 170 (324)
T ss_pred CCCC-CEEEEEecchHHHHHHHHHhhCCC-CCccEEEEEcCCCCH
Confidence 3445 899999999999988887765432 347888888876543
No 46
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.79 E-value=6.3e-18 Score=135.98 Aligned_cols=213 Identities=17% Similarity=0.153 Sum_probs=123.2
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC----CchhhHHHHHHHHHhcccccCCCCCc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP----CAYDDGWTVLKWAKSRSWLQSKDSKA 107 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d~~~~~~~~~~~~~~~~~~~~~ 107 (269)
|+||++||.+ .....|..++..|.+ +|.|+++|+|+++.+..+ ...++..+.+..+.+. .+.+
T Consensus 35 ~~iv~lHG~~-----~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~-----~~~~- 101 (286)
T PRK03204 35 PPILLCHGNP-----TWSFLYRDIIVALRD--RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDH-----LGLD- 101 (286)
T ss_pred CEEEEECCCC-----ccHHHHHHHHHHHhC--CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHH-----hCCC-
Confidence 7899999943 122336777777764 799999999998876543 2346667777776665 3556
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCch--hhhhcCCcccchHHH--HHHHHHhCCCCCC-C
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTES--EKRLDGKYFVTVQDR--DWYWRAYLPEGAN-R 182 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~ 182 (269)
+++|+||||||.+|+.++..+++. ++++|++++.......... ............... ............. .
T Consensus 102 ~~~lvG~S~Gg~va~~~a~~~p~~---v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (286)
T PRK03204 102 RYLSMGQDWGGPISMAVAVERADR---VRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHR 178 (286)
T ss_pred CEEEEEECccHHHHHHHHHhChhh---eeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccCC
Confidence 899999999999999999887776 9999988775422110000 000000000000000 0000000000000 0
Q ss_pred C-----------CCC----------CCCCCCCC---C----CccC-CCCCceeEEecCCCcChhHHHHHHHHHHHCCCCe
Q 024286 183 D-----------HPA----------CNPFGPKG---I----DLVG-VKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDV 233 (269)
Q Consensus 183 ~-----------~~~----------~~~~~~~~---~----~~~~-~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~ 233 (269)
. ... ...+.... . .+.. ....|+|+++|++|.+++.. ...+.+.+.-.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~-~~~~~~~~~ip~~ 257 (286)
T PRK03204 179 PSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPK-TILPRLRATFPDH 257 (286)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcH-HHHHHHHHhcCCC
Confidence 0 000 00000000 0 0000 00359999999999887432 2224455555567
Q ss_pred EEEEeCCCceeeeeCCCCchHHHHHHHHHHHh
Q 024286 234 KLLYLEQATIGFYFLPNNGHFYTVMDEISNFV 265 (269)
Q Consensus 234 ~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl 265 (269)
++++++++||..+ .+.++++.+.+.+||
T Consensus 258 ~~~~i~~aGH~~~----~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 258 VLVELPNAKHFIQ----EDAPDRIAAAIIERF 285 (286)
T ss_pred eEEEcCCCccccc----ccCHHHHHHHHHHhc
Confidence 9999999999764 446888999999997
No 47
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.79 E-value=1.1e-17 Score=140.21 Aligned_cols=98 Identities=21% Similarity=0.299 Sum_probs=69.9
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCch----hhHH-----HHHHHHHhccccc
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAY----DDGW-----TVLKWAKSRSWLQ 101 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~----~d~~-----~~~~~~~~~~~~~ 101 (269)
.|+||++||.+. +. ..|...+..|+. +|.|+++|+|+++.+..+... .+.. .+.+|+.+
T Consensus 105 ~p~vvllHG~~~---~~--~~~~~~~~~L~~--~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~----- 172 (402)
T PLN02894 105 APTLVMVHGYGA---SQ--GFFFRNFDALAS--RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA----- 172 (402)
T ss_pred CCEEEEECCCCc---ch--hHHHHHHHHHHh--CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH-----
Confidence 489999999543 22 225667777765 799999999999876543211 1111 12233322
Q ss_pred CCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 102 SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 102 ~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
.+.+ +++|+||||||.+|+.+|.++++. ++++|+.+|..
T Consensus 173 -l~~~-~~~lvGhS~GG~la~~~a~~~p~~---v~~lvl~~p~~ 211 (402)
T PLN02894 173 -KNLS-NFILLGHSFGGYVAAKYALKHPEH---VQHLILVGPAG 211 (402)
T ss_pred -cCCC-CeEEEEECHHHHHHHHHHHhCchh---hcEEEEECCcc
Confidence 3556 899999999999999999988766 99999998864
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.79 E-value=2.8e-18 Score=140.46 Aligned_cols=209 Identities=16% Similarity=0.073 Sum_probs=112.7
Q ss_pred HHHHHHHhhcCCCEEEeeccCCCCCCCC-----------CCchhhHHHHHHHHHhcccc----------c----CCC-CC
Q 024286 53 DILCRRLVGTCKAVVVSVNYRRAPENRY-----------PCAYDDGWTVLKWAKSRSWL----------Q----SKD-SK 106 (269)
Q Consensus 53 ~~~~~~l~~~~g~~v~~~d~r~~~~~~~-----------~~~~~d~~~~~~~~~~~~~~----------~----~~~-~~ 106 (269)
..+++.|+++ ||.|+++|.|+++.+.. ...++|+.+.++.+++.... . ... ..
T Consensus 64 ~~~~~~l~~~-G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (332)
T TIGR01607 64 DSWIENFNKN-GYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRL 142 (332)
T ss_pred HHHHHHHHHC-CCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCC
Confidence 4578899888 99999999999875431 11234555566655441000 0 011 24
Q ss_pred ccEEEeecCchHHHHHHHHHHhhhc-----cccccceeeeCCccCCCCCC-------chh-h-------hh-cCCcccc-
Q 024286 107 AHIYLAGDSSGGNIVHHVALRAVES-----EVEILGNILLNPMFGGQERT-------ESE-K-------RL-DGKYFVT- 164 (269)
Q Consensus 107 ~~i~l~G~S~Gg~la~~~a~~~~~~-----~~~~~~~i~~~p~~~~~~~~-------~~~-~-------~~-~~~~~~~- 164 (269)
+++|+||||||.+++.++.+.+.. ...++|+|+++|++...... ... . .. .......
T Consensus 143 -p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 221 (332)
T TIGR01607 143 -PMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKK 221 (332)
T ss_pred -ceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCc
Confidence 899999999999999988765432 13589999999987532110 000 0 00 0000000
Q ss_pred --hHHHHHHHHHhCCCCCCCCCCCC-C---CCCCC----CCCccCCC-CCceeEEecCCCcChhHHHHHHHHHHHCC-CC
Q 024286 165 --VQDRDWYWRAYLPEGANRDHPAC-N---PFGPK----GIDLVGVK-FPKSLVVVAGLDLIQDWQLAYMEGLKKAG-QD 232 (269)
Q Consensus 165 --~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~----~~~~~~~~-~~P~li~~G~~D~~~~~~~~~~~~l~~~~-~~ 232 (269)
........+.+..+......... . .+... ........ ..|+|+++|++|.+++.... .+..+..+ .+
T Consensus 222 ~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~-~~~~~~~~~~~ 300 (332)
T TIGR01607 222 IRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGT-VSFYNKLSISN 300 (332)
T ss_pred cccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHH-HHHHHhccCCC
Confidence 00000000011111100000000 0 00000 00111111 24999999999999875322 12222322 46
Q ss_pred eEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 233 VKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 233 ~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
++++++++++|....+. ..+++++.+.+||++
T Consensus 301 ~~l~~~~g~~H~i~~E~---~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 301 KELHTLEDMDHVITIEP---GNEEVLKKIIEWISN 332 (332)
T ss_pred cEEEEECCCCCCCccCC---CHHHHHHHHHHHhhC
Confidence 78999999999876553 478899999999963
No 49
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.79 E-value=1.8e-17 Score=129.82 Aligned_cols=209 Identities=13% Similarity=0.058 Sum_probs=119.6
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 111 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l 111 (269)
|.||++||.+. +. ..|..++..|++ +|.|+++|+|+++.+.... ..+..+..+.+.+. . .+ ++++
T Consensus 5 ~~iv~~HG~~~---~~--~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~-----~-~~-~~~l 69 (245)
T TIGR01738 5 VHLVLIHGWGM---NA--EVFRCLDEELSA--HFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQ-----A-PD-PAIW 69 (245)
T ss_pred ceEEEEcCCCC---ch--hhHHHHHHhhcc--CeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHh-----C-CC-CeEE
Confidence 78999999432 32 237778888864 7999999999988764322 23455555555554 2 25 8999
Q ss_pred eecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCC--c-----hh-hhhcCCccc-chHHHHHHHHH-hCCCCCC
Q 024286 112 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT--E-----SE-KRLDGKYFV-TVQDRDWYWRA-YLPEGAN 181 (269)
Q Consensus 112 ~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~--~-----~~-~~~~~~~~~-~~~~~~~~~~~-~~~~~~~ 181 (269)
+||||||.+++.++.++++. ++++|++++........ . .. ..+...... .......+... .......
T Consensus 70 vG~S~Gg~~a~~~a~~~p~~---v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPDR---VRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTA 146 (245)
T ss_pred EEEcHHHHHHHHHHHHCHHh---hheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999987766 89999887654321100 0 00 000000000 00000000000 0000000
Q ss_pred -------------CCCCC-------CCCCC--CCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeC
Q 024286 182 -------------RDHPA-------CNPFG--PKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLE 239 (269)
Q Consensus 182 -------------~~~~~-------~~~~~--~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~ 239 (269)
...+. ...+. .....+..+ .+|+++++|++|.+++.... +.+.+.-.++++++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~ 223 (245)
T TIGR01738 147 RQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNI-SVPFLRLYGYLDGLVPAKVV--PYLDKLAPHSELYIFA 223 (245)
T ss_pred chHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcC-CCCEEEEeecCCcccCHHHH--HHHHHhCCCCeEEEeC
Confidence 00000 00000 000011111 35999999999998875322 3344444578999999
Q ss_pred CCceeeeeCCCCchHHHHHHHHHHHh
Q 024286 240 QATIGFYFLPNNGHFYTVMDEISNFV 265 (269)
Q Consensus 240 ~~~H~~~~~~~~~~~~~~~~~i~~fl 265 (269)
++||... .++.+++.+.+.+||
T Consensus 224 ~~gH~~~----~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 224 KAAHAPF----LSHAEAFCALLVAFK 245 (245)
T ss_pred CCCCCcc----ccCHHHHHHHHHhhC
Confidence 9999754 346899999999986
No 50
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.78 E-value=3.4e-17 Score=131.46 Aligned_cols=101 Identities=19% Similarity=0.186 Sum_probs=70.4
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC------chhhHHHHHHHHHhcccccCCCC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC------AYDDGWTVLKWAKSRSWLQSKDS 105 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~------~~~d~~~~~~~~~~~~~~~~~~~ 105 (269)
|+||++||++. +. ...+..+...+... ||.|+++|+|+++.+..+. .+++..+.+..+.+. .+.
T Consensus 26 ~~vl~~hG~~g---~~-~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (288)
T TIGR01250 26 IKLLLLHGGPG---MS-HEYLENLRELLKEE-GREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREK-----LGL 95 (288)
T ss_pred CeEEEEcCCCC---cc-HHHHHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHH-----cCC
Confidence 78999999532 22 22244444455444 9999999999988765432 233444444444443 355
Q ss_pred CccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 106 KAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 106 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
+ +++|+||||||.+|+.++...++. ++++++.+++..
T Consensus 96 ~-~~~liG~S~Gg~ia~~~a~~~p~~---v~~lvl~~~~~~ 132 (288)
T TIGR01250 96 D-KFYLLGHSWGGMLAQEYALKYGQH---LKGLIISSMLDS 132 (288)
T ss_pred C-cEEEEEeehHHHHHHHHHHhCccc---cceeeEeccccc
Confidence 6 899999999999999999987655 899999887653
No 51
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.77 E-value=1.2e-17 Score=138.01 Aligned_cols=122 Identities=32% Similarity=0.463 Sum_probs=104.2
Q ss_pred ccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcc
Q 024286 19 AELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRS 98 (269)
Q Consensus 19 ~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~ 98 (269)
+..|.++-+..+ -.|+.+|||||+..+..+ ++.+++.|+.+.|+.++++||.+.|+.+||..++++.-++.|+.++.
T Consensus 385 ~~~wh~P~p~S~-sli~HcHGGGfVAqsSkS--HE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~ 461 (880)
T KOG4388|consen 385 LELWHRPAPRSR-SLIVHCHGGGFVAQSSKS--HEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNC 461 (880)
T ss_pred cccCCCCCCCCc-eEEEEecCCceeeecccc--ccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCH
Confidence 444444433233 699999999999887776 69999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccEEEeecCchHHHHHHHHHHhhhcccc-ccceeeeCCc
Q 024286 99 WLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVE-ILGNILLNPM 144 (269)
Q Consensus 99 ~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~-~~~~i~~~p~ 144 (269)
+.++...+ ||+++|.|+||+++..++++.-..+++ .+|+++.+|.
T Consensus 462 allG~TgE-riv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 462 ALLGSTGE-RIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred HHhCcccc-eEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 99998888 999999999999999999987665554 4777777754
No 52
>PLN02511 hydrolase
Probab=99.77 E-value=1e-17 Score=139.93 Aligned_cols=105 Identities=23% Similarity=0.245 Sum_probs=77.5
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCC-------CCchhhHHHHHHHHHhcccccCC
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY-------PCAYDDGWTVLKWAKSRSWLQSK 103 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~ 103 (269)
.|+||++||.+ |+....++..++..+.++ ||.|+++|+|+++.+.. ....+|+.++++++... .
T Consensus 100 ~p~vvllHG~~---g~s~~~y~~~~~~~~~~~-g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~-----~ 170 (388)
T PLN02511 100 APVLILLPGLT---GGSDDSYVRHMLLRARSK-GWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGR-----Y 170 (388)
T ss_pred CCEEEEECCCC---CCCCCHHHHHHHHHHHHC-CCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHH-----C
Confidence 48999999932 233333344566666667 99999999999876542 24467999999999876 3
Q ss_pred CCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 104 DSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
... +++++||||||.+++.++.+.++. ..+.+++++++.++
T Consensus 171 ~~~-~~~lvG~SlGg~i~~~yl~~~~~~-~~v~~~v~is~p~~ 211 (388)
T PLN02511 171 PSA-NLYAAGWSLGANILVNYLGEEGEN-CPLSGAVSLCNPFD 211 (388)
T ss_pred CCC-CEEEEEechhHHHHHHHHHhcCCC-CCceEEEEECCCcC
Confidence 345 899999999999999999887643 34777777776544
No 53
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.76 E-value=2.7e-17 Score=138.99 Aligned_cols=106 Identities=15% Similarity=0.216 Sum_probs=72.0
Q ss_pred cCCCCCcccEEEEEcCCccccCCCCchhhHH-HHHHHh---hcCCCEEEeeccCCCCCCCCCC----chhhHHHHH-HHH
Q 024286 24 PVSSEVVVPVIIFFHGGSFAHSSANSAIYDI-LCRRLV---GTCKAVVVSVNYRRAPENRYPC----AYDDGWTVL-KWA 94 (269)
Q Consensus 24 p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~-~~~~l~---~~~g~~v~~~d~r~~~~~~~~~----~~~d~~~~~-~~~ 94 (269)
|+.++.+ |.||++||.+. +.. .|.. ++..|+ +. +|.|+++|+|+++.+..+. .+++..+.+ ..+
T Consensus 195 p~~~~~k-~~VVLlHG~~~---s~~--~W~~~~~~~L~~~~~~-~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~l 267 (481)
T PLN03087 195 PKDNKAK-EDVLFIHGFIS---SSA--FWTETLFPNFSDAAKS-TYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSV 267 (481)
T ss_pred CCCCCCC-CeEEEECCCCc---cHH--HHHHHHHHHHHHHhhC-CCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHH
Confidence 3333334 79999999432 322 2443 334554 35 8999999999988765431 233444444 233
Q ss_pred HhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 95 KSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 95 ~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
.+. .+.+ ++.|+||||||.+|+.+|.++++. ++++++++|..
T Consensus 268 l~~-----lg~~-k~~LVGhSmGG~iAl~~A~~~Pe~---V~~LVLi~~~~ 309 (481)
T PLN03087 268 LER-----YKVK-SFHIVAHSLGCILALALAVKHPGA---VKSLTLLAPPY 309 (481)
T ss_pred HHH-----cCCC-CEEEEEECHHHHHHHHHHHhChHh---ccEEEEECCCc
Confidence 343 3456 999999999999999999998876 99999998653
No 54
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.76 E-value=2.3e-17 Score=129.59 Aligned_cols=108 Identities=19% Similarity=0.076 Sum_probs=85.2
Q ss_pred CcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccC--CCCC
Q 024286 29 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQS--KDSK 106 (269)
Q Consensus 29 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~~~~ 106 (269)
.....+|+|||.| +....|......|+. ...|.++|..+.+.+..|....|...+..|..+..+.|- -+.+
T Consensus 88 ~~~~plVliHGyG-----Ag~g~f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~ 160 (365)
T KOG4409|consen 88 ANKTPLVLIHGYG-----AGLGLFFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLE 160 (365)
T ss_pred cCCCcEEEEeccc-----hhHHHHHHhhhhhhh--cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCc
Confidence 4447899999933 233347777888887 799999999999988877766666665556666555553 4566
Q ss_pred ccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCC
Q 024286 107 AHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 147 (269)
Q Consensus 107 ~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~ 147 (269)
++.|+|||+||++|..+|+++++. |+.+||.+|+-..
T Consensus 161 -KmilvGHSfGGYLaa~YAlKyPer---V~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 161 -KMILVGHSFGGYLAAKYALKYPER---VEKLILVSPWGFP 197 (365)
T ss_pred -ceeEeeccchHHHHHHHHHhChHh---hceEEEecccccc
Confidence 999999999999999999999988 9999999999543
No 55
>COG0400 Predicted esterase [General function prediction only]
Probab=99.76 E-value=4.8e-17 Score=122.21 Aligned_cols=175 Identities=19% Similarity=0.146 Sum_probs=123.2
Q ss_pred CcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCC-----------CCCCC--CCchhhHHHHHHHHH
Q 024286 29 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA-----------PENRY--PCAYDDGWTVLKWAK 95 (269)
Q Consensus 29 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-----------~~~~~--~~~~~d~~~~~~~~~ 95 (269)
+..|+||++||.| ++. ..+..+.+.+.- ++.++++.=+.. ....+ .....+..+..+.+.
T Consensus 16 p~~~~iilLHG~G---gde--~~~~~~~~~~~P--~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 16 PAAPLLILLHGLG---GDE--LDLVPLPELILP--NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred CCCcEEEEEecCC---CCh--hhhhhhhhhcCC--CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 3348999999954 232 224444444443 577776652211 11111 222334556666777
Q ss_pred hcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHh
Q 024286 96 SRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAY 175 (269)
Q Consensus 96 ~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (269)
.....++++.+ +++++|+|.||++|+.+..+++.. ++++++++|++......
T Consensus 89 ~~~~~~gi~~~-~ii~~GfSqGA~ial~~~l~~~~~---~~~ail~~g~~~~~~~~------------------------ 140 (207)
T COG0400 89 ELAEEYGIDSS-RIILIGFSQGANIALSLGLTLPGL---FAGAILFSGMLPLEPEL------------------------ 140 (207)
T ss_pred HHHHHhCCChh-heEEEecChHHHHHHHHHHhCchh---hccchhcCCcCCCCCcc------------------------
Confidence 66666779999 999999999999999999988765 99999999987543210
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCch
Q 024286 176 LPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGH 253 (269)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~ 253 (269)
. ...+.+|++++||++|+++|. +.+..+.++..+.+++.+.++ +||.+
T Consensus 141 --------~-------------~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i-------- 190 (207)
T COG0400 141 --------L-------------PDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEI-------- 190 (207)
T ss_pred --------c-------------cccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcC--------
Confidence 0 001134999999999999875 578888999999999999999 79975
Q ss_pred HHHHHHHHHHHhhcC
Q 024286 254 FYTVMDEISNFVSCN 268 (269)
Q Consensus 254 ~~~~~~~i~~fl~~~ 268 (269)
..+.++++.+|+.+.
T Consensus 191 ~~e~~~~~~~wl~~~ 205 (207)
T COG0400 191 PPEELEAARSWLANT 205 (207)
T ss_pred CHHHHHHHHHHHHhc
Confidence 366777888898764
No 56
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.76 E-value=4e-18 Score=124.56 Aligned_cols=199 Identities=18% Similarity=0.107 Sum_probs=133.8
Q ss_pred cccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC---CCC-chhhHHHHHHHHHhcccccCCCC
Q 024286 30 VVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR---YPC-AYDDGWTVLKWAKSRSWLQSKDS 105 (269)
Q Consensus 30 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~---~~~-~~~d~~~~~~~~~~~~~~~~~~~ 105 (269)
.+|+++++||.+...|. .-..+..+..+.++.|+.++||+.+.+. -+. ..-|..++++|+..+.. .++
T Consensus 77 S~pTlLyfh~NAGNmGh-----r~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~---~dk 148 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGH-----RLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPD---LDK 148 (300)
T ss_pred CCceEEEEccCCCcccc-----hhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCcc---CCc
Confidence 55999999995544443 3455666667779999999999876553 222 34599999999999988 899
Q ss_pred CccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHH-HhCCCCCCCCC
Q 024286 106 KAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWR-AYLPEGANRDH 184 (269)
Q Consensus 106 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 184 (269)
. ++++.|.|.||++|+.+|++..+. +.++|+-+-+++.+...-........ .....+..+ .+.. ....
T Consensus 149 t-kivlfGrSlGGAvai~lask~~~r---i~~~ivENTF~SIp~~~i~~v~p~~~----k~i~~lc~kn~~~S---~~ki 217 (300)
T KOG4391|consen 149 T-KIVLFGRSLGGAVAIHLASKNSDR---ISAIIVENTFLSIPHMAIPLVFPFPM----KYIPLLCYKNKWLS---YRKI 217 (300)
T ss_pred c-eEEEEecccCCeeEEEeeccchhh---eeeeeeechhccchhhhhheeccchh----hHHHHHHHHhhhcc---hhhh
Confidence 9 999999999999999999887665 99999999888774332111110000 000111111 0100 0000
Q ss_pred CCCCCCCCCCCCccCCCCCceeEEecCCCcChhHH--HHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHH
Q 024286 185 PACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEIS 262 (269)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~ 262 (269)
..+ ..|+|++.|..|.++|+- +++++.+... ..++.+||++.|.-.. ..+-+++.|.
T Consensus 218 ~~~--------------~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~--~Krl~eFP~gtHNDT~-----i~dGYfq~i~ 276 (300)
T KOG4391|consen 218 GQC--------------RMPFLFISGLKDELVPPVMMRQLYELCPSR--TKRLAEFPDGTHNDTW-----ICDGYFQAIE 276 (300)
T ss_pred ccc--------------cCceEEeecCccccCCcHHHHHHHHhCchh--hhhheeCCCCccCceE-----EeccHHHHHH
Confidence 011 239999999999999873 4444444433 4589999999996322 2456888888
Q ss_pred HHhhcC
Q 024286 263 NFVSCN 268 (269)
Q Consensus 263 ~fl~~~ 268 (269)
+||.+.
T Consensus 277 dFlaE~ 282 (300)
T KOG4391|consen 277 DFLAEV 282 (300)
T ss_pred HHHHHh
Confidence 888753
No 57
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.75 E-value=1.3e-16 Score=133.35 Aligned_cols=212 Identities=17% Similarity=0.060 Sum_probs=119.9
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC---CchhhHHHHHHHHHhcccccCCCCCc
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP---CAYDDGWTVLKWAKSRSWLQSKDSKA 107 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~~ 107 (269)
.|+||++||.+. +... |...+..|.. +|.|+++|+++++.+... ....+..+.+..+.+. .+.+
T Consensus 131 ~~~vl~~HG~~~---~~~~--~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~-----~~~~- 197 (371)
T PRK14875 131 GTPVVLIHGFGG---DLNN--WLFNHAALAA--GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA-----LGIE- 197 (371)
T ss_pred CCeEEEECCCCC---ccch--HHHHHHHHhc--CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh-----cCCc-
Confidence 389999999432 3332 6777777765 699999999998876322 2344444444444444 4667
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhh-hhcCC-----------------cccchHHHH
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEK-RLDGK-----------------YFVTVQDRD 169 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~~~~-----------------~~~~~~~~~ 169 (269)
+++|+|||+||.+|+.+|.+.++. +.++++++|............ ..... .........
T Consensus 198 ~~~lvG~S~Gg~~a~~~a~~~~~~---v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (371)
T PRK14875 198 RAHLVGHSMGGAVALRLAARAPQR---VASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVE 274 (371)
T ss_pred cEEEEeechHHHHHHHHHHhCchh---eeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHH
Confidence 899999999999999999886655 899999987643221111000 00000 000000000
Q ss_pred HHHHHhCCCCCC--------CCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCC
Q 024286 170 WYWRAYLPEGAN--------RDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQA 241 (269)
Q Consensus 170 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 241 (269)
..+......... ...............+... .+|+|+++|++|.+++.... +.+ ...+++.+++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvlii~g~~D~~vp~~~~--~~l---~~~~~~~~~~~~ 348 (371)
T PRK14875 275 DLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASL-AIPVLVIWGEQDRIIPAAHA--QGL---PDGVAVHVLPGA 348 (371)
T ss_pred HHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcC-CCCEEEEEECCCCccCHHHH--hhc---cCCCeEEEeCCC
Confidence 000000000000 0000000000000001111 34999999999999875321 222 235789999999
Q ss_pred ceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 242 TIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 242 ~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
||... .+..+++.+.+.+||+++
T Consensus 349 gH~~~----~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 349 GHMPQ----MEAAADVNRLLAEFLGKA 371 (371)
T ss_pred CCChh----hhCHHHHHHHHHHHhccC
Confidence 99654 345788999999999864
No 58
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.75 E-value=1.2e-16 Score=125.53 Aligned_cols=100 Identities=17% Similarity=0.108 Sum_probs=69.6
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 111 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l 111 (269)
|+||++||.+. +. ..|..++..| + +|.|+++|+|+++.+..+.. .+..+..+++.+.... .+.+ ++++
T Consensus 3 p~vvllHG~~~---~~--~~w~~~~~~l--~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~--~~~~-~~~l 70 (242)
T PRK11126 3 PWLVFLHGLLG---SG--QDWQPVGEAL--P-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQS--YNIL-PYWL 70 (242)
T ss_pred CEEEEECCCCC---Ch--HHHHHHHHHc--C-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHH--cCCC-CeEE
Confidence 78999999442 32 3478888876 4 79999999999887654322 2333333333333222 2445 8999
Q ss_pred eecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 112 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 112 ~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
+||||||.+|+.++.++++. .++++++.++..
T Consensus 71 vG~S~Gg~va~~~a~~~~~~--~v~~lvl~~~~~ 102 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAG--GLCGLIVEGGNP 102 (242)
T ss_pred EEECHHHHHHHHHHHhCCcc--cccEEEEeCCCC
Confidence 99999999999999986432 388999887654
No 59
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=3.8e-17 Score=136.54 Aligned_cols=221 Identities=17% Similarity=0.104 Sum_probs=150.4
Q ss_pred ccccccCC--CCCcccEEEEEcCCccccCCCCchhh--HHHHHHHhhcCCCEEEeeccCCCCCCC--CC---------Cc
Q 024286 19 AELEKPVS--SEVVVPVIIFFHGGSFAHSSANSAIY--DILCRRLVGTCKAVVVSVNYRRAPENR--YP---------CA 83 (269)
Q Consensus 19 ~~~~~p~~--~~~~~p~vv~~HGgg~~~~~~~~~~~--~~~~~~l~~~~g~~v~~~d~r~~~~~~--~~---------~~ 83 (269)
--+|+|-+ ..+|+|+|+++-||.-+.--.++..+ ..-...|++. ||.|+.+|-|++.... |+ -.
T Consensus 628 gmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~Lasl-Gy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE 706 (867)
T KOG2281|consen 628 GMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASL-GYVVVFIDNRGSAHRGLKFESHIKKKMGQVE 706 (867)
T ss_pred EEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhc-ceEEEEEcCCCccccchhhHHHHhhccCeee
Confidence 35677766 45779999999998866533333112 2335678888 9999999999875431 21 23
Q ss_pred hhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCccc
Q 024286 84 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFV 163 (269)
Q Consensus 84 ~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~ 163 (269)
++|-.+.++|+.++.. -+|.+ ||+|-|+|.||++++..++++++- ++++|+-+|+.+..........
T Consensus 707 ~eDQVeglq~Laeq~g--fidmd-rV~vhGWSYGGYLSlm~L~~~P~I---frvAIAGapVT~W~~YDTgYTE------- 773 (867)
T KOG2281|consen 707 VEDQVEGLQMLAEQTG--FIDMD-RVGVHGWSYGGYLSLMGLAQYPNI---FRVAIAGAPVTDWRLYDTGYTE------- 773 (867)
T ss_pred ehhhHHHHHHHHHhcC--cccch-heeEeccccccHHHHHHhhcCcce---eeEEeccCcceeeeeecccchh-------
Confidence 5788999999998763 18899 999999999999999999999887 9999999999876543221111
Q ss_pred chHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCC-CC-ceeEEecCCCcChh--HHHHHHHHHHHCCCCeEEEEeC
Q 024286 164 TVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVK-FP-KSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLE 239 (269)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-P~li~~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~ 239 (269)
.|+.-......... ........+.+. .| .+|++||--|.-|. .+..+..+|.++|.+.++++||
T Consensus 774 ----------RYMg~P~~nE~gY~--agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP 841 (867)
T KOG2281|consen 774 ----------RYMGYPDNNEHGYG--AGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFP 841 (867)
T ss_pred ----------hhcCCCccchhccc--chhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEcc
Confidence 11111100000000 000000011110 22 59999999997664 3567788999999999999999
Q ss_pred CCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 240 QATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 240 ~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
+..|+.- ..+..+-+-.++..||+++
T Consensus 842 ~ERHsiR---~~es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 842 NERHSIR---NPESGIYYEARLLHFLQEN 867 (867)
T ss_pred ccccccC---CCccchhHHHHHHHHHhhC
Confidence 9999864 3445566667899999874
No 60
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.75 E-value=5.4e-17 Score=127.50 Aligned_cols=233 Identities=10% Similarity=0.022 Sum_probs=131.3
Q ss_pred cccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCC-------CCchhhHHHH
Q 024286 18 IAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY-------PCAYDDGWTV 90 (269)
Q Consensus 18 ~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-------~~~~~d~~~~ 90 (269)
.+.++.++....+.|+||++||.|...+ .....|..+++.|+.. ||.|+.+|||+++.+.- ....+|+..+
T Consensus 12 ~~~~~~~p~~~~~~~~VlllHG~g~~~~-~~~~~~~~la~~La~~-Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~a 89 (266)
T TIGR03101 12 RFCLYHPPVAVGPRGVVIYLPPFAEEMN-KSRRMVALQARAFAAG-GFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAA 89 (266)
T ss_pred EEEEEecCCCCCCceEEEEECCCccccc-chhHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCccccCCHHHHHHHHHHH
Confidence 3444554433333489999999443211 1123366778899887 99999999999876521 1235778888
Q ss_pred HHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcC--CcccchH--
Q 024286 91 LKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDG--KYFVTVQ-- 166 (269)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~--~~~~~~~-- 166 (269)
++++.+. +.+ +++|+||||||.+|+.++.+.++. ++++|+++|+.+............. .......
T Consensus 90 i~~L~~~------~~~-~v~LvG~SmGG~vAl~~A~~~p~~---v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~~~ 159 (266)
T TIGR03101 90 YRWLIEQ------GHP-PVTLWGLRLGALLALDAANPLAAK---CNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGESAE 159 (266)
T ss_pred HHHHHhc------CCC-CEEEEEECHHHHHHHHHHHhCccc---cceEEEeccccchHHHHHHHHHHHHHHHhccccccc
Confidence 8888765 345 899999999999999999887655 8999999998875533222111100 0000000
Q ss_pred HHHHHHHHhCCCC-CCCCCCCCCC-CCCCCCCccCC----CCCceeEEecCC--C-cChhHHHHHHHHHHHCCCCeEEEE
Q 024286 167 DRDWYWRAYLPEG-ANRDHPACNP-FGPKGIDLVGV----KFPKSLVVVAGL--D-LIQDWQLAYMEGLKKAGQDVKLLY 237 (269)
Q Consensus 167 ~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~----~~~P~li~~G~~--D-~~~~~~~~~~~~l~~~~~~~~~~~ 237 (269)
............. ..-......+ +.......+.. ...++|++.-.. | ..-+...++.+.+++.|.+++...
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~~ 239 (266)
T TIGR03101 160 ASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGEQWVQSGVEVTVDL 239 (266)
T ss_pred cchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHHHHHHHHHcCCeEeeee
Confidence 0000000000000 0000000000 00000000000 022667776643 2 233456788899999999999999
Q ss_pred eCCCceeeeeCCCCchHHHHHHHHHHH
Q 024286 238 LEQATIGFYFLPNNGHFYTVMDEISNF 264 (269)
Q Consensus 238 ~~~~~H~~~~~~~~~~~~~~~~~i~~f 264 (269)
++|. .|...+..++..+.++....+
T Consensus 240 ~~~~--~~~~~~~~~~~p~~~~~~~~~ 264 (266)
T TIGR03101 240 VPGP--AFWQTQEIEEAPELIARTTAL 264 (266)
T ss_pred cCCc--hhhcchhhhHhHHHHHHHHhh
Confidence 9986 666555455555555555444
No 61
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.75 E-value=6.3e-17 Score=131.18 Aligned_cols=219 Identities=16% Similarity=0.098 Sum_probs=128.9
Q ss_pred cccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCC-CCCCC----CchhhHHHHHHHHHhcccccCCC
Q 024286 30 VVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP-ENRYP----CAYDDGWTVLKWAKSRSWLQSKD 104 (269)
Q Consensus 30 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~-~~~~~----~~~~d~~~~~~~~~~~~~~~~~~ 104 (269)
..|.||++|| |.. +. ..|...+..|....|+.|.++|..+++ .++.+ ....+....+..+... ..
T Consensus 57 ~~~pvlllHG--F~~-~~--~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~-----~~ 126 (326)
T KOG1454|consen 57 DKPPVLLLHG--FGA-SS--FSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKE-----VF 126 (326)
T ss_pred CCCcEEEecc--ccC-Cc--ccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHh-----hc
Confidence 3489999999 422 32 338888989998767999999999866 33222 2344555555544444 34
Q ss_pred CCccEEEeecCchHHHHHHHHHHhhhcccccccee---eeCCccCCCCCCch-hhhhcCC--------c------c---c
Q 024286 105 SKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNI---LLNPMFGGQERTES-EKRLDGK--------Y------F---V 163 (269)
Q Consensus 105 ~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i---~~~p~~~~~~~~~~-~~~~~~~--------~------~---~ 163 (269)
.+ ++.|+|||+||.+|+.+|..+++. +++++ ++.|.......... ....... . . .
T Consensus 127 ~~-~~~lvghS~Gg~va~~~Aa~~P~~---V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 202 (326)
T KOG1454|consen 127 VE-PVSLVGHSLGGIVALKAAAYYPET---VDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLV 202 (326)
T ss_pred Cc-ceEEEEeCcHHHHHHHHHHhCccc---ccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhhe
Confidence 55 899999999999999999998887 88888 55544432221100 0000000 0 0 0
Q ss_pred chHHH----------HHHHH---HhCCCC----CCCC--CCCCCCCCC---C-CCCccCCCCCceeEEecCCCcChhHHH
Q 024286 164 TVQDR----------DWYWR---AYLPEG----ANRD--HPACNPFGP---K-GIDLVGVKFPKSLVVVAGLDLIQDWQL 220 (269)
Q Consensus 164 ~~~~~----------~~~~~---~~~~~~----~~~~--~~~~~~~~~---~-~~~~~~~~~~P~li~~G~~D~~~~~~~ 220 (269)
..... ..... ...... ...+ ......... . ...+.....+|+||++|++|.+++..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~- 281 (326)
T KOG1454|consen 203 SEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLE- 281 (326)
T ss_pred eHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHH-
Confidence 00000 00000 000000 0000 000000000 0 01111111369999999999999864
Q ss_pred HHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 221 AYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 221 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.+..+++...++++++++++||.- +.+.++++...+..|++++
T Consensus 282 -~~~~~~~~~pn~~~~~I~~~gH~~----h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 282 -LAEELKKKLPNAELVEIPGAGHLP----HLERPEEVAALLRSFIARL 324 (326)
T ss_pred -HHHHHHhhCCCceEEEeCCCCccc----ccCCHHHHHHHHHHHHHHh
Confidence 345555555889999999999965 4457899999999999865
No 62
>PLN02578 hydrolase
Probab=99.75 E-value=2.9e-16 Score=130.10 Aligned_cols=96 Identities=21% Similarity=0.109 Sum_probs=69.2
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCc---hhh-HHHHHHHHHhcccccCCCCCc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCA---YDD-GWTVLKWAKSRSWLQSKDSKA 107 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~---~~d-~~~~~~~~~~~~~~~~~~~~~ 107 (269)
|.||++||.+. + ...|...+..|+. +|.|+++|+++++.+..+.. ..+ ..++.+++.+. ..+
T Consensus 87 ~~vvliHG~~~---~--~~~w~~~~~~l~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~------~~~- 152 (354)
T PLN02578 87 LPIVLIHGFGA---S--AFHWRYNIPELAK--KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV------VKE- 152 (354)
T ss_pred CeEEEECCCCC---C--HHHHHHHHHHHhc--CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh------ccC-
Confidence 67899999431 2 3337777888865 79999999999887654321 121 22333444332 335
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCc
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 144 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~ 144 (269)
+++|+||||||.+|+.+|.++++. +++++++++.
T Consensus 153 ~~~lvG~S~Gg~ia~~~A~~~p~~---v~~lvLv~~~ 186 (354)
T PLN02578 153 PAVLVGNSLGGFTALSTAVGYPEL---VAGVALLNSA 186 (354)
T ss_pred CeEEEEECHHHHHHHHHHHhChHh---cceEEEECCC
Confidence 899999999999999999998776 9999998764
No 63
>PRK06489 hypothetical protein; Provisional
Probab=99.74 E-value=1.9e-16 Score=131.52 Aligned_cols=99 Identities=16% Similarity=0.176 Sum_probs=66.7
Q ss_pred ccEEEEEcCCccccCCCCchhhH--HHHHHH-------hhcCCCEEEeeccCCCCCCCCCC----------chhhHH-HH
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYD--ILCRRL-------VGTCKAVVVSVNYRRAPENRYPC----------AYDDGW-TV 90 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~--~~~~~l-------~~~~g~~v~~~d~r~~~~~~~~~----------~~~d~~-~~ 90 (269)
.|.||++||++. +... |. .+...| ..+ +|.|+++|+|+++.+..+. .+++.. +.
T Consensus 69 gpplvllHG~~~---~~~~--~~~~~~~~~l~~~~~~l~~~-~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~ 142 (360)
T PRK06489 69 DNAVLVLHGTGG---SGKS--FLSPTFAGELFGPGQPLDAS-KYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQ 142 (360)
T ss_pred CCeEEEeCCCCC---chhh--hccchhHHHhcCCCCccccc-CCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHH
Confidence 389999999542 3222 32 333333 134 8999999999998765432 223333 23
Q ss_pred HHHHHhcccccCCCCCccEE-EeecCchHHHHHHHHHHhhhccccccceeeeCCc
Q 024286 91 LKWAKSRSWLQSKDSKAHIY-LAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 144 (269)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~ 144 (269)
+..+.+. .+.+ ++. |+||||||.+|+.+|.++++. ++++|++++.
T Consensus 143 ~~~l~~~-----lgi~-~~~~lvG~SmGG~vAl~~A~~~P~~---V~~LVLi~s~ 188 (360)
T PRK06489 143 YRLVTEG-----LGVK-HLRLILGTSMGGMHAWMWGEKYPDF---MDALMPMASQ 188 (360)
T ss_pred HHHHHHh-----cCCC-ceeEEEEECHHHHHHHHHHHhCchh---hheeeeeccC
Confidence 3334343 3445 775 899999999999999998877 9999998765
No 64
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.74 E-value=3.2e-16 Score=122.72 Aligned_cols=110 Identities=18% Similarity=0.190 Sum_probs=78.8
Q ss_pred cccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchh-----hH-HHHHHH
Q 024286 20 ELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYD-----DG-WTVLKW 93 (269)
Q Consensus 20 ~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~-----d~-~~~~~~ 93 (269)
.+..........|+|+++|| | ...+-.|......|+++ ||+|+++|.|+.+.+..|.... .+ .+.+.+
T Consensus 33 ~~h~~e~g~~~gP~illlHG--f---Pe~wyswr~q~~~la~~-~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~l 106 (322)
T KOG4178|consen 33 RLHYVEGGPGDGPIVLLLHG--F---PESWYSWRHQIPGLASR-GYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVAL 106 (322)
T ss_pred EEEEEeecCCCCCEEEEEcc--C---Cccchhhhhhhhhhhhc-ceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHH
Confidence 33344444444599999999 3 22333378889999998 9999999999998776654421 12 222222
Q ss_pred HHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 94 AKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
+.. +..+ +++++||++|+.+|..+|+.+++. +++.++++...
T Consensus 107 ld~------Lg~~-k~~lvgHDwGaivaw~la~~~Per---v~~lv~~nv~~ 148 (322)
T KOG4178|consen 107 LDH------LGLK-KAFLVGHDWGAIVAWRLALFYPER---VDGLVTLNVPF 148 (322)
T ss_pred HHH------hccc-eeEEEeccchhHHHHHHHHhChhh---cceEEEecCCC
Confidence 222 2345 999999999999999999999887 99998887444
No 65
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.74 E-value=2.6e-16 Score=130.38 Aligned_cols=214 Identities=18% Similarity=0.107 Sum_probs=121.4
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC-------chhhHHHHHHHHHhcccccCC
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC-------AYDDGWTVLKWAKSRSWLQSK 103 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-------~~~d~~~~~~~~~~~~~~~~~ 103 (269)
.|+||++||.+. ....|..++..|++ +|.|+++|+++++.+..+. ..++..+.+..+.+. +
T Consensus 127 ~~~ivllHG~~~-----~~~~w~~~~~~L~~--~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~-----l 194 (383)
T PLN03084 127 NPPVLLIHGFPS-----QAYSYRKVLPVLSK--NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE-----L 194 (383)
T ss_pred CCeEEEECCCCC-----CHHHHHHHHHHHhc--CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHH-----h
Confidence 389999999442 22337888888864 8999999999988764332 233333333333333 3
Q ss_pred CCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCC-Cchh-hhhcC---------C------------
Q 024286 104 DSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQER-TESE-KRLDG---------K------------ 160 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~-~~~~-~~~~~---------~------------ 160 (269)
..+ ++.|+|||+||.+|+.++.++++. ++++|+++|....... .+.. ..... .
T Consensus 195 ~~~-~~~LvG~s~GG~ia~~~a~~~P~~---v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 270 (383)
T PLN03084 195 KSD-KVSLVVQGYFSPPVVKYASAHPDK---IKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSC 270 (383)
T ss_pred CCC-CceEEEECHHHHHHHHHHHhChHh---hcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhccc
Confidence 445 899999999999999999988776 9999999987532110 0100 00000 0
Q ss_pred --cccchHHHHHHHHHhCCCCCCC-C----CC-CCCCCC---CCCC-CccCCC-CCceeEEecCCCcChhHHHHHHHHHH
Q 024286 161 --YFVTVQDRDWYWRAYLPEGANR-D----HP-ACNPFG---PKGI-DLVGVK-FPKSLVVVAGLDLIQDWQLAYMEGLK 227 (269)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~-~----~~-~~~~~~---~~~~-~~~~~~-~~P~li~~G~~D~~~~~~~~~~~~l~ 227 (269)
..........+...+....... . .. ....+. .... .+...+ ..|+|+++|++|.+++... .+.+.
T Consensus 271 ~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~--~~~~a 348 (383)
T PLN03084 271 GPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDG--VEDFC 348 (383)
T ss_pred CccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHH--HHHHH
Confidence 0000000001111110000000 0 00 000000 0000 000001 3499999999999876532 23333
Q ss_pred HCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 228 KAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 228 ~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
+. .+.++.++++++|..+ .+..+++.+.|.+||++
T Consensus 349 ~~-~~a~l~vIp~aGH~~~----~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 349 KS-SQHKLIELPMAGHHVQ----EDCGEELGGIISGILSK 383 (383)
T ss_pred Hh-cCCeEEEECCCCCCcc----hhCHHHHHHHHHHHhhC
Confidence 33 2568999999999654 35689999999999864
No 66
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.74 E-value=8.9e-18 Score=121.68 Aligned_cols=193 Identities=17% Similarity=0.191 Sum_probs=133.1
Q ss_pred CCCCCccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC-CCCCchhhHHHH
Q 024286 12 EEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-RYPCAYDDGWTV 90 (269)
Q Consensus 12 ~~~~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-~~~~~~~d~~~~ 90 (269)
.+...+.+|+|-|... . |+.||+|||-|..|.... --..+....+. ||+|.+++|-++++. +....+.+....
T Consensus 51 g~~g~q~VDIwg~~~~--~-klfIfIHGGYW~~g~rk~--clsiv~~a~~~-gY~vasvgY~l~~q~htL~qt~~~~~~g 124 (270)
T KOG4627|consen 51 GEGGRQLVDIWGSTNQ--A-KLFIFIHGGYWQEGDRKM--CLSIVGPAVRR-GYRVASVGYNLCPQVHTLEQTMTQFTHG 124 (270)
T ss_pred CCCCceEEEEecCCCC--c-cEEEEEecchhhcCchhc--ccchhhhhhhc-CeEEEEeccCcCcccccHHHHHHHHHHH
Confidence 3344678899988332 2 799999999998887654 23334444444 999999999999887 667778889999
Q ss_pred HHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHH
Q 024286 91 LKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDW 170 (269)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (269)
++|+.+... +.+ .+.+.|||.|+++|....++. ...++.|++++++..+.......+....-
T Consensus 125 v~filk~~~----n~k-~l~~gGHSaGAHLa~qav~R~--r~prI~gl~l~~GvY~l~EL~~te~g~dl----------- 186 (270)
T KOG4627|consen 125 VNFILKYTE----NTK-VLTFGGHSAGAHLAAQAVMRQ--RSPRIWGLILLCGVYDLRELSNTESGNDL----------- 186 (270)
T ss_pred HHHHHHhcc----cce-eEEEcccchHHHHHHHHHHHh--cCchHHHHHHHhhHhhHHHHhCCcccccc-----------
Confidence 999988754 556 899999999999999998874 34679999999999865432221111000
Q ss_pred HHHHhCCCCCCCCC-CCCCCCCCCCCCccCCCCCceeEEecCCC--cChhHHHHHHHHHHHCCCCeEEEEeCCCcee
Q 024286 171 YWRAYLPEGANRDH-PACNPFGPKGIDLVGVKFPKSLVVVAGLD--LIQDWQLAYMEGLKKAGQDVKLLYLEQATIG 244 (269)
Q Consensus 171 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~li~~G~~D--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 244 (269)
+...+. ...+.......... -|+|++.+++| .++++.+.|+..+++ .++..|++.+|-
T Consensus 187 --------gLt~~~ae~~Scdl~~~~~v~----~~ilVv~~~~espklieQnrdf~~q~~~----a~~~~f~n~~hy 247 (270)
T KOG4627|consen 187 --------GLTERNAESVSCDLWEYTDVT----VWILVVAAEHESPKLIEQNRDFADQLRK----ASFTLFKNYDHY 247 (270)
T ss_pred --------CcccchhhhcCccHHHhcCce----eeeeEeeecccCcHHHHhhhhHHHHhhh----cceeecCCcchh
Confidence 000000 00111100111222 28999999999 457888898888775 478899999994
No 67
>PRK07581 hypothetical protein; Validated
Probab=99.73 E-value=1.3e-16 Score=131.55 Aligned_cols=99 Identities=16% Similarity=0.092 Sum_probs=66.7
Q ss_pred cEEEEEcCCccccCCCCchhhHHHH---HHHhhcCCCEEEeeccCCCCCCCCCCc---------------hhhHHHHHHH
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILC---RRLVGTCKAVVVSVNYRRAPENRYPCA---------------YDDGWTVLKW 93 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~---~~l~~~~g~~v~~~d~r~~~~~~~~~~---------------~~d~~~~~~~ 93 (269)
|+||++||+++ +... |...+ ..|..+ +|.|+++|+|+++.+..+.. .+|+......
T Consensus 42 ~~vll~~~~~~---~~~~--~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (339)
T PRK07581 42 NAILYPTWYSG---THQD--NEWLIGPGRALDPE-KYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRL 115 (339)
T ss_pred CEEEEeCCCCC---Cccc--chhhccCCCccCcC-ceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHH
Confidence 77777777553 3222 22222 355545 89999999999987653321 2333333334
Q ss_pred HHhcccccCCCCCcc-EEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 94 AKSRSWLQSKDSKAH-IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~-i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
+.+. .+.+ + .+|+||||||.+|+.+|.++++. ++++|++++..
T Consensus 116 l~~~-----lgi~-~~~~lvG~S~GG~va~~~a~~~P~~---V~~Lvli~~~~ 159 (339)
T PRK07581 116 LTEK-----FGIE-RLALVVGWSMGAQQTYHWAVRYPDM---VERAAPIAGTA 159 (339)
T ss_pred HHHH-----hCCC-ceEEEEEeCHHHHHHHHHHHHCHHH---HhhheeeecCC
Confidence 5443 3445 8 47999999999999999999887 99999887543
No 68
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.73 E-value=3.2e-15 Score=119.36 Aligned_cols=99 Identities=16% Similarity=0.247 Sum_probs=70.8
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC----Cchhh-HHHHHHHHHhcccccCCCCC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP----CAYDD-GWTVLKWAKSRSWLQSKDSK 106 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~~d-~~~~~~~~~~~~~~~~~~~~ 106 (269)
|.||++||.+. +.. .|..+...|.++ ||.|+++|+++++.+.-. ..+++ +....+.+.+. ...+
T Consensus 19 p~vvliHG~~~---~~~--~w~~~~~~L~~~-g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l-----~~~~ 87 (273)
T PLN02211 19 PHFVLIHGISG---GSW--CWYKIRCLMENS-GYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL-----PENE 87 (273)
T ss_pred CeEEEECCCCC---CcC--cHHHHHHHHHhC-CCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc-----CCCC
Confidence 89999999442 333 378888888877 999999999998754211 12233 33333444332 1235
Q ss_pred ccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 107 AHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 107 ~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
+++|+||||||.+++.++.++++. ++++|++++..
T Consensus 88 -~v~lvGhS~GG~v~~~~a~~~p~~---v~~lv~~~~~~ 122 (273)
T PLN02211 88 -KVILVGHSAGGLSVTQAIHRFPKK---ICLAVYVAATM 122 (273)
T ss_pred -CEEEEEECchHHHHHHHHHhChhh---eeEEEEecccc
Confidence 899999999999999999877655 89999997754
No 69
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.73 E-value=8.2e-16 Score=127.23 Aligned_cols=104 Identities=11% Similarity=0.011 Sum_probs=75.7
Q ss_pred cEEEEEcC---CccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC----Cch-hhHHHHHHHHHhcccccCC
Q 024286 32 PVIIFFHG---GSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP----CAY-DDGWTVLKWAKSRSWLQSK 103 (269)
Q Consensus 32 p~vv~~HG---gg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----~~~-~d~~~~~~~~~~~~~~~~~ 103 (269)
+.|+++|| .+|.. +...+..+++.|+++ ||.|+++|+++.+.+... +.. .++.++++++.+. .
T Consensus 63 ~pvl~v~~~~~~~~~~---d~~~~~~~~~~L~~~-G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~-----~ 133 (350)
T TIGR01836 63 TPLLIVYALVNRPYML---DLQEDRSLVRGLLER-GQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRT-----S 133 (350)
T ss_pred CcEEEeccccccceec---cCCCCchHHHHHHHC-CCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHH-----h
Confidence 45899998 22211 111135788899888 999999999986543222 222 3467788888876 3
Q ss_pred CCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCC
Q 024286 104 DSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQ 148 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~ 148 (269)
+.+ +++++||||||.+++.++...++. ++++++++|.++..
T Consensus 134 ~~~-~i~lvGhS~GG~i~~~~~~~~~~~---v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 134 KLD-QISLLGICQGGTFSLCYAALYPDK---IKNLVTMVTPVDFE 174 (350)
T ss_pred CCC-cccEEEECHHHHHHHHHHHhCchh---eeeEEEeccccccC
Confidence 456 899999999999999998876655 99999999887654
No 70
>PRK11071 esterase YqiA; Provisional
Probab=99.73 E-value=2.6e-16 Score=118.52 Aligned_cols=176 Identities=17% Similarity=0.159 Sum_probs=104.3
Q ss_pred cEEEEEcCCccccCCCCchhhH--HHHHHHhhc-CCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCcc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYD--ILCRRLVGT-CKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAH 108 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~--~~~~~l~~~-~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 108 (269)
|.||++||.+ ++..+ |. .+...+.+. .+|.|+++|+++++ .+..+.+..+.+. .+.+ +
T Consensus 2 p~illlHGf~---ss~~~--~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------~~~~~~l~~l~~~-----~~~~-~ 62 (190)
T PRK11071 2 STLLYLHGFN---SSPRS--AKATLLKNWLAQHHPDIEMIVPQLPPYP--------ADAAELLESLVLE-----HGGD-P 62 (190)
T ss_pred CeEEEECCCC---CCcch--HHHHHHHHHHHHhCCCCeEEeCCCCCCH--------HHHHHHHHHHHHH-----cCCC-C
Confidence 7899999922 23333 33 233444331 27999999999753 3555555555554 3446 8
Q ss_pred EEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcC---------CcccchHHHHHHHHHhCCCC
Q 024286 109 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDG---------KYFVTVQDRDWYWRAYLPEG 179 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 179 (269)
++|+|+||||.+|+.+|.+.+ ..+|+++|..+... ....... ....+......... +
T Consensus 63 ~~lvG~S~Gg~~a~~~a~~~~------~~~vl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~---- 128 (190)
T PRK11071 63 LGLVGSSLGGYYATWLSQCFM------LPAVVVNPAVRPFE---LLTDYLGENENPYTGQQYVLESRHIYDLKV-M---- 128 (190)
T ss_pred eEEEEECHHHHHHHHHHHHcC------CCEEEECCCCCHHH---HHHHhcCCcccccCCCcEEEcHHHHHHHHh-c----
Confidence 999999999999999998764 13588888765211 0000000 01111111111100 0
Q ss_pred CCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHH
Q 024286 180 ANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMD 259 (269)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 259 (269)
. . ..+.. ..|++++||+.|.++|.... .++.+ .++.++++|++|.|. ..+++++
T Consensus 129 -~-------~-----~~i~~--~~~v~iihg~~De~V~~~~a--~~~~~---~~~~~~~~ggdH~f~------~~~~~~~ 182 (190)
T PRK11071 129 -Q-------I-----DPLES--PDLIWLLQQTGDEVLDYRQA--VAYYA---ACRQTVEEGGNHAFV------GFERYFN 182 (190)
T ss_pred -C-------C-----ccCCC--hhhEEEEEeCCCCcCCHHHH--HHHHH---hcceEEECCCCcchh------hHHHhHH
Confidence 0 0 00110 12889999999999986322 22222 236678899999873 3488999
Q ss_pred HHHHHhh
Q 024286 260 EISNFVS 266 (269)
Q Consensus 260 ~i~~fl~ 266 (269)
.+.+|++
T Consensus 183 ~i~~fl~ 189 (190)
T PRK11071 183 QIVDFLG 189 (190)
T ss_pred HHHHHhc
Confidence 9999985
No 71
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.72 E-value=8.8e-16 Score=124.81 Aligned_cols=99 Identities=17% Similarity=0.119 Sum_probs=70.1
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC-----chhhHHHHHHHHHhcccccCCCCC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC-----AYDDGWTVLKWAKSRSWLQSKDSK 106 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----~~~d~~~~~~~~~~~~~~~~~~~~ 106 (269)
+.||++||++. +... ......+... +|.|+++|+|+++.+..+. ...+..+.+..+.+. .+.+
T Consensus 28 ~~lvllHG~~~---~~~~---~~~~~~~~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~-----l~~~ 95 (306)
T TIGR01249 28 KPVVFLHGGPG---SGTD---PGCRRFFDPE-TYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREK-----LGIK 95 (306)
T ss_pred CEEEEECCCCC---CCCC---HHHHhccCcc-CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-----cCCC
Confidence 67899999542 2221 2333444445 8999999999988764322 234555555555554 3456
Q ss_pred ccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 107 AHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 107 ~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
+++++||||||.+++.++.++++. ++++|+.++...
T Consensus 96 -~~~lvG~S~GG~ia~~~a~~~p~~---v~~lvl~~~~~~ 131 (306)
T TIGR01249 96 -NWLVFGGSWGSTLALAYAQTHPEV---VTGLVLRGIFLL 131 (306)
T ss_pred -CEEEEEECHHHHHHHHHHHHChHh---hhhheeeccccC
Confidence 899999999999999999988776 899999887643
No 72
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.71 E-value=1.3e-17 Score=128.96 Aligned_cols=98 Identities=24% Similarity=0.259 Sum_probs=72.2
Q ss_pred EEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC-----chhhHHHHHHHHHhcccccCCCCCcc
Q 024286 34 IIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC-----AYDDGWTVLKWAKSRSWLQSKDSKAH 108 (269)
Q Consensus 34 vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----~~~d~~~~~~~~~~~~~~~~~~~~~~ 108 (269)
||++||.+. +. ..|..+++.|+ + ||.|+++|+|+++.+..+. ..++..+.+..+.+. ...+ +
T Consensus 1 vv~~hG~~~---~~--~~~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~-----~~~~-~ 67 (228)
T PF12697_consen 1 VVFLHGFGG---SS--ESWDPLAEALA-R-GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDA-----LGIK-K 67 (228)
T ss_dssp EEEE-STTT---TG--GGGHHHHHHHH-T-TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHH-----TTTS-S
T ss_pred eEEECCCCC---CH--HHHHHHHHHHh-C-CCEEEEEecCCccccccccccCCcchhhhhhhhhhcccc-----cccc-c
Confidence 799999553 33 33888999885 5 9999999999988775432 233333333333343 3446 9
Q ss_pred EEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCC
Q 024286 109 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 147 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~ 147 (269)
++|+|||+||.+++.++.++++. ++++++++|....
T Consensus 68 ~~lvG~S~Gg~~a~~~a~~~p~~---v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 68 VILVGHSMGGMIALRLAARYPDR---VKGLVLLSPPPPL 103 (228)
T ss_dssp EEEEEETHHHHHHHHHHHHSGGG---EEEEEEESESSSH
T ss_pred ccccccccccccccccccccccc---cccceeecccccc
Confidence 99999999999999999987775 9999999998853
No 73
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.71 E-value=1.8e-17 Score=136.03 Aligned_cols=128 Identities=21% Similarity=0.239 Sum_probs=104.7
Q ss_pred CCCccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCC-CEEEeeccCCCCCC------------C-
Q 024286 14 HRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCK-AVVVSVNYRRAPEN------------R- 79 (269)
Q Consensus 14 ~~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g-~~v~~~d~r~~~~~------------~- 79 (269)
..+..++|+.|+.+.++.||+||||||+|..|+.... .+--..|+.+ | ++|+++|||+.... .
T Consensus 77 EDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~--~ydgs~La~~-g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~ 153 (491)
T COG2272 77 EDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEP--LYDGSALAAR-GDVVVVSVNYRLGALGFLDLSSLDTEDAFA 153 (491)
T ss_pred ccceeEEeeccCCCCCCCcEEEEEeccccccCCCccc--ccChHHHHhc-CCEEEEEeCcccccceeeehhhcccccccc
Confidence 4678899999995555569999999999999988764 3446688888 6 99999999976321 0
Q ss_pred CCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 80 YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 80 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
..-.+.|...+++|+.++++..+.|++ +|.|+|.|+||+.++.++.- +.....+..+|+.||.+.
T Consensus 154 ~n~Gl~DqilALkWV~~NIe~FGGDp~-NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 154 SNLGLLDQILALKWVRDNIEAFGGDPQ-NVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCcc-ceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 113678999999999999999999999 99999999999988876653 555567899999998885
No 74
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.69 E-value=6.8e-16 Score=127.40 Aligned_cols=86 Identities=10% Similarity=0.021 Sum_probs=58.1
Q ss_pred hhHHHHH---HHhhcCCCEEEeeccCCCCCCCCC-CchhhHHHHHHHHHhcccccCCCCCcc-EEEeecCchHHHHHHHH
Q 024286 51 IYDILCR---RLVGTCKAVVVSVNYRRAPENRYP-CAYDDGWTVLKWAKSRSWLQSKDSKAH-IYLAGDSSGGNIVHHVA 125 (269)
Q Consensus 51 ~~~~~~~---~l~~~~g~~v~~~d~r~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~la~~~a 125 (269)
+|..++. .|..+ +|.|+++|+|+++.+.-. ....+..+.+..+.+. .+.+ + ++|+||||||.+|+.+|
T Consensus 84 ~w~~~v~~~~~L~~~-~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~-----l~l~-~~~~lvG~SmGG~vA~~~A 156 (343)
T PRK08775 84 WWEGLVGSGRALDPA-RFRLLAFDFIGADGSLDVPIDTADQADAIALLLDA-----LGIA-RLHAFVGYSYGALVGLQFA 156 (343)
T ss_pred cchhccCCCCccCcc-ccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHH-----cCCC-cceEEEEECHHHHHHHHHH
Confidence 3666664 45445 899999999988654321 1223333333333332 2333 4 57999999999999999
Q ss_pred HHhhhccccccceeeeCCccC
Q 024286 126 LRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 126 ~~~~~~~~~~~~~i~~~p~~~ 146 (269)
.++++. ++++|++++...
T Consensus 157 ~~~P~~---V~~LvLi~s~~~ 174 (343)
T PRK08775 157 SRHPAR---VRTLVVVSGAHR 174 (343)
T ss_pred HHChHh---hheEEEECcccc
Confidence 998876 999999987643
No 75
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.69 E-value=1.6e-15 Score=118.72 Aligned_cols=231 Identities=16% Similarity=0.087 Sum_probs=128.0
Q ss_pred ccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC-------CCCchhhHHHHH
Q 024286 19 AELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-------YPCAYDDGWTVL 91 (269)
Q Consensus 19 ~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-------~~~~~~d~~~~~ 91 (269)
+++..++...++ |.||.+|| ..|+..+.....++..+.++ ||.|++++.|++.... .....+|+...+
T Consensus 64 ldw~~~p~~~~~-P~vVl~HG---L~G~s~s~y~r~L~~~~~~r-g~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l 138 (345)
T COG0429 64 LDWSEDPRAAKK-PLVVLFHG---LEGSSNSPYARGLMRALSRR-GWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFL 138 (345)
T ss_pred EeeccCccccCC-ceEEEEec---cCCCCcCHHHHHHHHHHHhc-CCeEEEEecccccCCcccCcceecccchhHHHHHH
Confidence 455554333334 99999999 55566666566777777777 9999999999886532 234568999999
Q ss_pred HHHHhcccccCCCCCccEEEeecCchH-HHHHHHHHHhhhccccccceeeeCCccCCC-------CCCc-h-hhhhc---
Q 024286 92 KWAKSRSWLQSKDSKAHIYLAGDSSGG-NIVHHVALRAVESEVEILGNILLNPMFGGQ-------ERTE-S-EKRLD--- 158 (269)
Q Consensus 92 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg-~la~~~a~~~~~~~~~~~~~i~~~p~~~~~-------~~~~-~-~~~~~--- 158 (269)
+++++. ..+. ++..+|.|+|| ++|.+++.. .+....-+++++.+|+- .. .... . .+...
T Consensus 139 ~~l~~~-----~~~r-~~~avG~SLGgnmLa~ylgee-g~d~~~~aa~~vs~P~D-l~~~~~~l~~~~s~~ly~r~l~~~ 210 (345)
T COG0429 139 DWLKAR-----FPPR-PLYAVGFSLGGNMLANYLGEE-GDDLPLDAAVAVSAPFD-LEACAYRLDSGFSLRLYSRYLLRN 210 (345)
T ss_pred HHHHHh-----CCCC-ceEEEEecccHHHHHHHHHhh-ccCcccceeeeeeCHHH-HHHHHHHhcCchhhhhhHHHHHHH
Confidence 999986 3455 99999999999 555555543 33323345555555652 11 0000 0 00000
Q ss_pred -------------CCcccc-hHHHHH--HHHHhCCCC--------CCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCc
Q 024286 159 -------------GKYFVT-VQDRDW--YWRAYLPEG--------ANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDL 214 (269)
Q Consensus 159 -------------~~~~~~-~~~~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~ 214 (269)
..-... ....+. ....+...- ...++...+--.+....+.. |+||+|+.+|+
T Consensus 211 L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~----PtLii~A~DDP 286 (345)
T COG0429 211 LKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRK----PTLIINAKDDP 286 (345)
T ss_pred HHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcccccccccccc----ceEEEecCCCC
Confidence 000000 000000 000000000 00000000001112233333 99999999999
Q ss_pred ChhHHHHHHHHHHH-CCCCeEEEEeCCCceeeeeCCCCchHH-HHHHHHHHHhhcC
Q 024286 215 IQDWQLAYMEGLKK-AGQDVKLLYLEQATIGFYFLPNNGHFY-TVMDEISNFVSCN 268 (269)
Q Consensus 215 ~~~~~~~~~~~l~~-~~~~~~~~~~~~~~H~~~~~~~~~~~~-~~~~~i~~fl~~~ 268 (269)
+++.. .. -.... .++.+.+..-+-+||.-++.....+.. -+.+++.+||+..
T Consensus 287 ~~~~~-~i-P~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 287 FMPPE-VI-PKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred CCChh-hC-CcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 98752 11 12222 567899999999999876653322222 4566788888753
No 76
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.69 E-value=3.1e-15 Score=121.12 Aligned_cols=236 Identities=15% Similarity=0.057 Sum_probs=140.3
Q ss_pred CCccccccccCCC-----CCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC-------C
Q 024286 15 RPNIAELEKPVSS-----EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP-------C 82 (269)
Q Consensus 15 ~~~~~~~~~p~~~-----~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-------~ 82 (269)
....+|+..+... ....|+||++|| ..|+..+.....++....++ ||.|++++.|+++.+... .
T Consensus 104 G~~~lDW~~~~~~~~~~~~~~~P~vvilpG---ltg~S~~~YVr~lv~~a~~~-G~r~VVfN~RG~~g~~LtTpr~f~ag 179 (409)
T KOG1838|consen 104 GTVTLDWVENPDSRCRTDDGTDPIVVILPG---LTGGSHESYVRHLVHEAQRK-GYRVVVFNHRGLGGSKLTTPRLFTAG 179 (409)
T ss_pred CEEEEeeccCcccccCCCCCCCcEEEEecC---CCCCChhHHHHHHHHHHHhC-CcEEEEECCCCCCCCccCCCceeecC
Confidence 3456788876653 245599999999 44454445556666666666 999999999997665322 3
Q ss_pred chhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcc
Q 024286 83 AYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYF 162 (269)
Q Consensus 83 ~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 162 (269)
..+|+.+++++++++ .... ++..+|.||||++-+.++....++.....|+++.+||-..... ..........+
T Consensus 180 ~t~Dl~~~v~~i~~~-----~P~a-~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~-~~~~~~~~~~~ 252 (409)
T KOG1838|consen 180 WTEDLREVVNHIKKR-----YPQA-PLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAAS-RSIETPLYRRF 252 (409)
T ss_pred CHHHHHHHHHHHHHh-----CCCC-ceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhh-hHHhcccchHH
Confidence 468999999999998 4445 8999999999999999988876665567777788888532000 00000000000
Q ss_pred ----c-----------------------------chHHHHHHHHHhCCCCCC--CCCCCCCCCCCCCCCccCCCCCceeE
Q 024286 163 ----V-----------------------------TVQDRDWYWRAYLPEGAN--RDHPACNPFGPKGIDLVGVKFPKSLV 207 (269)
Q Consensus 163 ----~-----------------------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~P~li 207 (269)
. +...++...-...-.-.. .-+...+ .....+.++ .|+|+
T Consensus 253 y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aS-s~~~v~~I~----VP~L~ 327 (409)
T KOG1838|consen 253 YNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKAS-SSNYVDKIK----VPLLC 327 (409)
T ss_pred HHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcc-hhhhccccc----ccEEE
Confidence 0 000000000000000000 0000000 001112222 39999
Q ss_pred EecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHH-HHHHhhc
Q 024286 208 VVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDE-ISNFVSC 267 (269)
Q Consensus 208 ~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~-i~~fl~~ 267 (269)
+++.+|++++...-=.+..+ .++.+-+++-.-+||.-.++...+.....+++ +.+|+.+
T Consensus 328 ina~DDPv~p~~~ip~~~~~-~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 328 INAADDPVVPEEAIPIDDIK-SNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred EecCCCCCCCcccCCHHHHh-cCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 99999999986311112333 34578888888889987766544456667777 7777764
No 77
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.68 E-value=6.1e-17 Score=130.68 Aligned_cols=222 Identities=15% Similarity=0.085 Sum_probs=122.8
Q ss_pred CccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC----------------
Q 024286 16 PNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR---------------- 79 (269)
Q Consensus 16 ~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~---------------- 79 (269)
+..-.+++|+..+++.|+||.+||.|. .... +... ..++.. ||.|+.+|.|+.+..+
T Consensus 68 ~V~g~l~~P~~~~~~~Pavv~~hGyg~---~~~~--~~~~-~~~a~~-G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~ 140 (320)
T PF05448_consen 68 RVYGWLYRPKNAKGKLPAVVQFHGYGG---RSGD--PFDL-LPWAAA-GYAVLAMDVRGQGGRSPDYRGSSGGTLKGHIT 140 (320)
T ss_dssp EEEEEEEEES-SSSSEEEEEEE--TT-----GGG--HHHH-HHHHHT-T-EEEEE--TTTSSSS-B-SSBSSS-SSSSTT
T ss_pred EEEEEEEecCCCCCCcCEEEEecCCCC---CCCC--cccc-cccccC-CeEEEEecCCCCCCCCCCccccCCCCCccHHh
Confidence 445577889866778899999999553 2111 2222 356777 9999999999765210
Q ss_pred --CCC---------chhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCC
Q 024286 80 --YPC---------AYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQ 148 (269)
Q Consensus 80 --~~~---------~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~ 148 (269)
..+ ...|+..+++++.+..+ +|.+ +|++.|.|+||.+|+.+|... .+|+++++..|++..-
T Consensus 141 ~g~~~~~e~~yyr~~~~D~~ravd~l~slpe---vD~~-rI~v~G~SqGG~lal~~aaLd----~rv~~~~~~vP~l~d~ 212 (320)
T PF05448_consen 141 RGIDDNPEDYYYRRVYLDAVRAVDFLRSLPE---VDGK-RIGVTGGSQGGGLALAAAALD----PRVKAAAADVPFLCDF 212 (320)
T ss_dssp TTTTS-TTT-HHHHHHHHHHHHHHHHHTSTT---EEEE-EEEEEEETHHHHHHHHHHHHS----ST-SEEEEESESSSSH
T ss_pred cCccCchHHHHHHHHHHHHHHHHHHHHhCCC---cCcc-eEEEEeecCchHHHHHHHHhC----ccccEEEecCCCccch
Confidence 011 23688999999998877 8999 999999999999999999863 3499999999987432
Q ss_pred CCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCC--CCCCCCC--CCCCCCccCCCCCceeEEecCCCcChhHHHHHHH
Q 024286 149 ERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRD--HPACNPF--GPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYME 224 (269)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~ 224 (269)
... . .... ..........+.+...+...... ......+ ......++ +|+++..|-.|.++|++-.|+
T Consensus 213 ~~~--~-~~~~-~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~----~pvl~~~gl~D~~cPP~t~fA- 283 (320)
T PF05448_consen 213 RRA--L-ELRA-DEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIK----CPVLFSVGLQDPVCPPSTQFA- 283 (320)
T ss_dssp HHH--H-HHT---STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG------SEEEEEEETT-SSS-HHHHHH-
T ss_pred hhh--h-hcCC-ccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcC----CCEEEEEecCCCCCCchhHHH-
Confidence 100 0 0000 00000111111110000000000 0000000 00012222 499999999999999876653
Q ss_pred HHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 225 GLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 225 ~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.......+.++.+|+..+|... .....++..+||++|
T Consensus 284 ~yN~i~~~K~l~vyp~~~He~~-------~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 284 AYNAIPGPKELVVYPEYGHEYG-------PEFQEDKQLNFLKEH 320 (320)
T ss_dssp HHCC--SSEEEEEETT--SSTT-------HHHHHHHHHHHHHH-
T ss_pred HHhccCCCeeEEeccCcCCCch-------hhHHHHHHHHHHhcC
Confidence 3333445689999999999531 233378899999875
No 78
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.68 E-value=5.4e-15 Score=113.77 Aligned_cols=190 Identities=21% Similarity=0.284 Sum_probs=124.2
Q ss_pred CccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHH
Q 024286 16 PNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAK 95 (269)
Q Consensus 16 ~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~ 95 (269)
|..+.|+.|.... .+|+|||+|| |. ....+|..+++.+|+. ||.|+.+|+.......-...+++..+.++|+.
T Consensus 3 p~~l~v~~P~~~g-~yPVv~f~~G--~~---~~~s~Ys~ll~hvASh-GyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~ 75 (259)
T PF12740_consen 3 PKPLLVYYPSSAG-TYPVVLFLHG--FL---LINSWYSQLLEHVASH-GYIVVAPDLYSIGGPDDTDEVASAAEVIDWLA 75 (259)
T ss_pred CCCeEEEecCCCC-CcCEEEEeCC--cC---CCHHHHHHHHHHHHhC-ceEEEEecccccCCCCcchhHHHHHHHHHHHH
Confidence 4456677776643 4699999999 32 2333489999999999 99999999554333444456788899999988
Q ss_pred hccccc-----CCCCCccEEEeecCchHHHHHHHHHHhhhc--cccccceeeeCCccCCCCCCchhhhhcCCcccchHHH
Q 024286 96 SRSWLQ-----SKDSKAHIYLAGDSSGGNIVHHVALRAVES--EVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDR 168 (269)
Q Consensus 96 ~~~~~~-----~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~--~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (269)
+..... ..|.. +++|+|||.||-+|..++....+. ...+++++++.|+-........
T Consensus 76 ~~L~~~l~~~v~~D~s-~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~--------------- 139 (259)
T PF12740_consen 76 KGLESKLPLGVKPDFS-KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQT--------------- 139 (259)
T ss_pred hcchhhcccccccccc-ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCC---------------
Confidence 743332 15888 999999999999999999876332 2469999999998632211000
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCc---------ChhHHHHHHHHHHHCCCCeEEEEeC
Q 024286 169 DWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDL---------IQDWQLAYMEGLKKAGQDVKLLYLE 239 (269)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~---------~~~~~~~~~~~l~~~~~~~~~~~~~ 239 (269)
.+....+.+...+. ..|++++-..-.. ..|...++.+...+...+....+..
T Consensus 140 ---------------~P~v~~~~p~s~~~----~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~ 200 (259)
T PF12740_consen 140 ---------------EPPVLTYTPQSFDF----SMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAK 200 (259)
T ss_pred ---------------CCccccCcccccCC----CCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeC
Confidence 00000000000111 1289888766553 2344455555555566777888889
Q ss_pred CCceeeee
Q 024286 240 QATIGFYF 247 (269)
Q Consensus 240 ~~~H~~~~ 247 (269)
+.||.=.+
T Consensus 201 ~~GH~d~L 208 (259)
T PF12740_consen 201 DYGHMDFL 208 (259)
T ss_pred CCCchHhh
Confidence 99996433
No 79
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.67 E-value=2.4e-16 Score=136.33 Aligned_cols=128 Identities=22% Similarity=0.268 Sum_probs=100.4
Q ss_pred CCCCccccccccCCC--CCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCC-CEEEeeccCCCCCC---------CC
Q 024286 13 EHRPNIAELEKPVSS--EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCK-AVVVSVNYRRAPEN---------RY 80 (269)
Q Consensus 13 ~~~~~~~~~~~p~~~--~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g-~~v~~~d~r~~~~~---------~~ 80 (269)
...+..++||.|... .+++|+|||||||||..|+.... ....++.+.+ +.|++++||+.+.. ..
T Consensus 75 sEdcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~----~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~ 150 (493)
T cd00312 75 SEDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY----PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPG 150 (493)
T ss_pred CCcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC----ChHHHHhcCCCEEEEEecccccccccccCCCCCCCc
Confidence 457889999999863 56679999999999998887642 2345555434 99999999965422 22
Q ss_pred CCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 81 PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 81 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
...+.|...+++|+++....++.|++ +|+|+|+|+||.++..++... .....++++|++|+...
T Consensus 151 n~g~~D~~~al~wv~~~i~~fggd~~-~v~~~G~SaG~~~~~~~~~~~-~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 151 NYGLKDQRLALKWVQDNIAAFGGDPD-SVTIFGESAGGASVSLLLLSP-DSKGLFHRAISQSGSAL 214 (493)
T ss_pred chhHHHHHHHHHHHHHHHHHhCCCcc-eEEEEeecHHHHHhhhHhhCc-chhHHHHHHhhhcCCcc
Confidence 34578999999999999999999999 999999999999998887753 22345888898887654
No 80
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.66 E-value=2.1e-16 Score=138.24 Aligned_cols=129 Identities=21% Similarity=0.243 Sum_probs=93.4
Q ss_pred CCCCccccccccCCCCC--cccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCC-------CCCC---C
Q 024286 13 EHRPNIAELEKPVSSEV--VVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA-------PENR---Y 80 (269)
Q Consensus 13 ~~~~~~~~~~~p~~~~~--~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-------~~~~---~ 80 (269)
...+..++||.|..... ++||+||||||||..|+.... ...-...++.. ++.|+.++||+. ++.. -
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~-~~~~~~~~~~~-~vivVt~nYRlg~~Gfl~~~~~~~~~g 182 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFP-PYDGASLAASK-DVIVVTINYRLGAFGFLSLGDLDAPSG 182 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSG-GGHTHHHHHHH-TSEEEEE----HHHHH-BSSSTTSHBS
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccc-cccccccccCC-CEEEEEecccccccccccccccccCch
Confidence 34788999999988443 589999999999999987322 22333445556 999999999964 2222 3
Q ss_pred CCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 81 PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 81 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
.-.+.|...+++|+++++...|.|++ +|.|+|+|+||..+..++.. +.....++++|+.|+..
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~-~VTl~G~SAGa~sv~~~l~s-p~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPD-NVTLFGQSAGAASVSLLLLS-PSSKGLFHRAILQSGSA 245 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHG-GGGTTSBSEEEEES--T
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCc-ceeeeeecccccccceeeec-ccccccccccccccccc
Confidence 44688999999999999999999999 99999999999999888776 44456799999999843
No 81
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.65 E-value=4.1e-15 Score=123.18 Aligned_cols=102 Identities=17% Similarity=0.114 Sum_probs=68.4
Q ss_pred cEEEEEcCCccccCCCCc---------hhhHHHH---HHHhhcCCCEEEeeccCC--CCCCCC---------------CC
Q 024286 32 PVIIFFHGGSFAHSSANS---------AIYDILC---RRLVGTCKAVVVSVNYRR--APENRY---------------PC 82 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~---------~~~~~~~---~~l~~~~g~~v~~~d~r~--~~~~~~---------------~~ 82 (269)
|+||++||-+ ++... .+|..++ ..|..+ +|.|+++|+|+ ++.+.- +.
T Consensus 32 ~~vll~Hg~~---~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~ 107 (351)
T TIGR01392 32 NAVLVCHALT---GDAHVAGYHDDGDPGWWDDLIGPGRAIDTD-RYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLI 107 (351)
T ss_pred CEEEEcCCcC---cchhhcccCCCCCCCchhhccCCCCCcCCC-ceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCC
Confidence 7999999933 22211 1355443 245456 89999999998 332211 12
Q ss_pred chhhHHHHHHHHHhcccccCCCCCcc-EEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 83 AYDDGWTVLKWAKSRSWLQSKDSKAH-IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 83 ~~~d~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
.++|..+.+..+.+. .+.+ + ++|+||||||.+|+.++.++++. ++++|++++...
T Consensus 108 ~~~~~~~~~~~~~~~-----l~~~-~~~~l~G~S~Gg~ia~~~a~~~p~~---v~~lvl~~~~~~ 163 (351)
T TIGR01392 108 TIRDDVKAQKLLLDH-----LGIE-QIAAVVGGSMGGMQALEWAIDYPER---VRAIVVLATSAR 163 (351)
T ss_pred cHHHHHHHHHHHHHH-----cCCC-CceEEEEECHHHHHHHHHHHHChHh---hheEEEEccCCc
Confidence 244555554444444 3445 7 99999999999999999998776 999999987653
No 82
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.64 E-value=2.5e-14 Score=103.07 Aligned_cols=181 Identities=22% Similarity=0.295 Sum_probs=122.2
Q ss_pred cccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC--CCC---CchhhHHHHHHHHHh
Q 024286 22 EKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN--RYP---CAYDDGWTVLKWAKS 96 (269)
Q Consensus 22 ~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~--~~~---~~~~d~~~~~~~~~~ 96 (269)
+.|.+ .+..|+.|.+|-=.-..|+.........+..|.++ |++++.+|||+-+.+ ++. ...+|+.++++|+++
T Consensus 20 ~~~~~-~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~-G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~ 97 (210)
T COG2945 20 YEPAK-TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKR-GFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQA 97 (210)
T ss_pred cCCCC-CCCCceEEecCCCccccCccCCHHHHHHHHHHHhC-CceEEeecccccccccCcccCCcchHHHHHHHHHHHHh
Confidence 44444 34449999999844333344443344555566656 999999999975543 343 346899999999999
Q ss_pred cccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhC
Q 024286 97 RSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYL 176 (269)
Q Consensus 97 ~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (269)
+.. +.. ...+.|+|.|+.+++.+|++.++ ....+..+|.++..+ .
T Consensus 98 ~hp----~s~-~~~l~GfSFGa~Ia~~la~r~~e----~~~~is~~p~~~~~d----f---------------------- 142 (210)
T COG2945 98 RHP----DSA-SCWLAGFSFGAYIAMQLAMRRPE----ILVFISILPPINAYD----F---------------------- 142 (210)
T ss_pred hCC----Cch-hhhhcccchHHHHHHHHHHhccc----ccceeeccCCCCchh----h----------------------
Confidence 853 323 34789999999999999998755 577777777765110 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHH
Q 024286 177 PEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYT 256 (269)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~ 256 (269)
....+. -.|.++++|+.|.+++....+ +..+ +.+.++++.++++|-|.. ....
T Consensus 143 --------s~l~P~-----------P~~~lvi~g~~Ddvv~l~~~l-~~~~--~~~~~~i~i~~a~HFF~g-----Kl~~ 195 (210)
T COG2945 143 --------SFLAPC-----------PSPGLVIQGDADDVVDLVAVL-KWQE--SIKITVITIPGADHFFHG-----KLIE 195 (210)
T ss_pred --------hhccCC-----------CCCceeEecChhhhhcHHHHH-Hhhc--CCCCceEEecCCCceecc-----cHHH
Confidence 000000 128999999999887764332 2222 356789999999997642 3577
Q ss_pred HHHHHHHHhh
Q 024286 257 VMDEISNFVS 266 (269)
Q Consensus 257 ~~~~i~~fl~ 266 (269)
+.+.+.+||+
T Consensus 196 l~~~i~~~l~ 205 (210)
T COG2945 196 LRDTIADFLE 205 (210)
T ss_pred HHHHHHHHhh
Confidence 8888999884
No 83
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.63 E-value=7e-15 Score=141.34 Aligned_cols=217 Identities=13% Similarity=0.135 Sum_probs=121.0
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC-----------chhhHHHHHHHHHhccc
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC-----------AYDDGWTVLKWAKSRSW 99 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----------~~~d~~~~~~~~~~~~~ 99 (269)
.|+||++||.+. +.. .|..++..|.. +|.|+++|+|+++.+..+. .+++..+.+..+.+.
T Consensus 1371 ~~~vVllHG~~~---s~~--~w~~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~-- 1441 (1655)
T PLN02980 1371 GSVVLFLHGFLG---TGE--DWIPIMKAISG--SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH-- 1441 (1655)
T ss_pred CCeEEEECCCCC---CHH--HHHHHHHHHhC--CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH--
Confidence 389999999442 333 37888888865 6999999999988764321 233444443333333
Q ss_pred ccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCch-hhhhcCC---cccchHHHHHHHHHh
Q 024286 100 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTES-EKRLDGK---YFVTVQDRDWYWRAY 175 (269)
Q Consensus 100 ~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~ 175 (269)
.+.+ +++|+||||||.+|+.++.++++. +++++++++.......... ....... ..........+...+
T Consensus 1442 ---l~~~-~v~LvGhSmGG~iAl~~A~~~P~~---V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 1514 (1655)
T PLN02980 1442 ---ITPG-KVTLVGYSMGARIALYMALRFSDK---IEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENW 1514 (1655)
T ss_pred ---hCCC-CEEEEEECHHHHHHHHHHHhChHh---hCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHh
Confidence 3456 899999999999999999988776 9999998765322111000 0000000 000000000000000
Q ss_pred CCCC------C------------CCCCC-----CCCCC--CCCCCCccCCC--CCceeEEecCCCcChhH-HHHHHHHHH
Q 024286 176 LPEG------A------------NRDHP-----ACNPF--GPKGIDLVGVK--FPKSLVVVAGLDLIQDW-QLAYMEGLK 227 (269)
Q Consensus 176 ~~~~------~------------~~~~~-----~~~~~--~~~~~~~~~~~--~~P~li~~G~~D~~~~~-~~~~~~~l~ 227 (269)
.... . ..... ....+ ......+..+. ..|+|+++|++|.+++. +..+.+.+.
T Consensus 1515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~~a~~~~~~i~ 1594 (1655)
T PLN02980 1515 YSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQIAQKMYREIG 1594 (1655)
T ss_pred ccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccHHHHHHHHHHcc
Confidence 0000 0 00000 00000 00000001111 34999999999987653 344444443
Q ss_pred HCC--------CCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 228 KAG--------QDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 228 ~~~--------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
+.. ..+++++++++||..+ .+.++++.+.+.+||++
T Consensus 1595 ~a~~~~~~~~~~~a~lvvI~~aGH~~~----lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1595 KSKESGNDKGKEIIEIVEIPNCGHAVH----LENPLPVIRALRKFLTR 1638 (1655)
T ss_pred ccccccccccccceEEEEECCCCCchH----HHCHHHHHHHHHHHHHh
Confidence 320 1368999999999754 34678899999999985
No 84
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.61 E-value=1e-14 Score=106.38 Aligned_cols=220 Identities=15% Similarity=0.177 Sum_probs=134.1
Q ss_pred eeecCCCCCCCCCccccccccCC--CCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccC--CC----
Q 024286 4 RIYRPTNGEEHRPNIAELEKPVS--SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR--RA---- 75 (269)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~p~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r--~~---- 75 (269)
++|.+.+....-.-++.||.|+. .+++.|++.|+-| .........-....++.|++.|.+|+.||-. +.
T Consensus 15 ~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSG---LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g 91 (283)
T KOG3101|consen 15 KVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSG---LTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAG 91 (283)
T ss_pred eeeeccccccccceEEEEecCCCcccCCcCceEEEecC---CcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCC
Confidence 46666666655555789999987 3455899999999 4334444333556778888889999999943 21
Q ss_pred -CCC-------CC-----CCchhhHHHHHHHHHhcc------cccCCCCCccEEEeecCchHHHHHHHHHHhhhcccccc
Q 024286 76 -PEN-------RY-----PCAYDDGWTVLKWAKSRS------WLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEIL 136 (269)
Q Consensus 76 -~~~-------~~-----~~~~~d~~~~~~~~~~~~------~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~ 136 (269)
+++ .+ .+....-.++++|+.++. ....+|+. ++.|.||||||+-|+..+++.+.+ .+
T Consensus 92 ~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~-k~~IfGHSMGGhGAl~~~Lkn~~k---yk 167 (283)
T KOG3101|consen 92 DDESWDFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPL-KVGIFGHSMGGHGALTIYLKNPSK---YK 167 (283)
T ss_pred CcccccccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccch-hcceeccccCCCceEEEEEcCccc---cc
Confidence 111 00 011122234555554321 11227888 999999999999999998887665 89
Q ss_pred ceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcCh
Q 024286 137 GNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQ 216 (269)
Q Consensus 137 ~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~ 216 (269)
.+.+++|+++...-......+.+ ++.+ . ...|+.|...... ...+... .-+||-+|..|.+.
T Consensus 168 SvSAFAPI~NP~~cpWGqKAf~g-YLG~-~--ka~W~~yDat~li-------------k~y~~~~-~~ilIdqG~~D~Fl 229 (283)
T KOG3101|consen 168 SVSAFAPICNPINCPWGQKAFTG-YLGD-N--KAQWEAYDATHLI-------------KNYRGVG-DDILIDQGAADNFL 229 (283)
T ss_pred ceeccccccCcccCcchHHHhhc-ccCC-C--hHHHhhcchHHHH-------------HhcCCCC-ccEEEecCccchhh
Confidence 99999999987654433322211 1111 0 1112222110000 1111111 15899999999887
Q ss_pred hH---HHHHHHHHHHC-CCCeEEEEeCCCceeeeeC
Q 024286 217 DW---QLAYMEGLKKA-GQDVKLLYLEQATIGFYFL 248 (269)
Q Consensus 217 ~~---~~~~~~~l~~~-~~~~~~~~~~~~~H~~~~~ 248 (269)
+. -..+.++.+.. ..++.++.-+|-.|.+++.
T Consensus 230 ~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYyfI 265 (283)
T KOG3101|consen 230 AEQLLPENLLEACKATWQAPVVFRLQEGYDHSYYFI 265 (283)
T ss_pred hhhcChHHHHHHhhccccccEEEEeecCCCcceeee
Confidence 63 24555666533 3678899999999998765
No 85
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.60 E-value=2e-14 Score=120.03 Aligned_cols=62 Identities=16% Similarity=0.051 Sum_probs=48.7
Q ss_pred CceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeC-CCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 203 PKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLE-QATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~-~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.|+|+++|++|.+++. .+.+.+.+...+.++++.+++ ++||... .++.+++.+.+.+||++.
T Consensus 310 ~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~----le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 310 ARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAF----LLDDPRYGRLVRAFLERA 374 (379)
T ss_pred CCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhH----hcCHHHHHHHHHHHHHhh
Confidence 4999999999988764 456677777766667888885 8999754 456788999999999863
No 86
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.60 E-value=1.9e-14 Score=106.15 Aligned_cols=190 Identities=17% Similarity=0.137 Sum_probs=131.6
Q ss_pred ccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCC----CC------------CCC
Q 024286 17 NIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA----PE------------NRY 80 (269)
Q Consensus 17 ~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~----~~------------~~~ 80 (269)
..++-|.-.+.+.+ -+||.|-- +.|... ..-...+..++.+ ||.|+.||+-.. ++ ...
T Consensus 26 ~gldaYv~gs~~~~-~~li~i~D---vfG~~~-~n~r~~Adk~A~~-Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~ 99 (242)
T KOG3043|consen 26 GGLDAYVVGSTSSK-KVLIVIQD---VFGFQF-PNTREGADKVALN-GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSP 99 (242)
T ss_pred cCeeEEEecCCCCC-eEEEEEEe---eecccc-HHHHHHHHHHhcC-CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCc
Confidence 35677776665554 46666655 222322 2247778899988 999999996543 21 123
Q ss_pred CCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCC
Q 024286 81 PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGK 160 (269)
Q Consensus 81 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~ 160 (269)
+...+++...++|++.. .+.. +|+++|+++||.++..+.+..+ .+.++++++|......
T Consensus 100 ~~~~~~i~~v~k~lk~~-----g~~k-kIGv~GfCwGak~vv~~~~~~~----~f~a~v~~hps~~d~~----------- 158 (242)
T KOG3043|consen 100 PKIWKDITAVVKWLKNH-----GDSK-KIGVVGFCWGAKVVVTLSAKDP----EFDAGVSFHPSFVDSA----------- 158 (242)
T ss_pred ccchhHHHHHHHHHHHc-----CCcc-eeeEEEEeecceEEEEeeccch----hheeeeEecCCcCChh-----------
Confidence 34567999999999976 5667 9999999999998877766543 4899999998653210
Q ss_pred cccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHH--HHHHHHHHHCC-CCeEEEE
Q 024286 161 YFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAG-QDVKLLY 237 (269)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~--~~~~~~l~~~~-~~~~~~~ 237 (269)
..... ..|+|++.|+.|.++|.. ..+.+++++.. ...++++
T Consensus 159 --------------------------------D~~~v----k~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~ 202 (242)
T KOG3043|consen 159 --------------------------------DIANV----KAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKT 202 (242)
T ss_pred --------------------------------HHhcC----CCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEE
Confidence 00011 239999999999997753 56666777654 2357999
Q ss_pred eCCCceeeeeC---CCC----chHHHHHHHHHHHhhcCC
Q 024286 238 LEQATIGFYFL---PNN----GHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 238 ~~~~~H~~~~~---~~~----~~~~~~~~~i~~fl~~~~ 269 (269)
|+|.+|+|... ..+ ...++.+.++++|+++++
T Consensus 203 f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 203 FSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred cCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 99999999851 112 235678888999998864
No 87
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.59 E-value=5.5e-15 Score=113.27 Aligned_cols=164 Identities=16% Similarity=0.108 Sum_probs=101.6
Q ss_pred cccccccCC--CCCcc-cEEEEEcCCccccCCCCchhhHHHH-------HHHhhcCCCEEEeeccCC-CCCCC--CCCch
Q 024286 18 IAELEKPVS--SEVVV-PVIIFFHGGSFAHSSANSAIYDILC-------RRLVGTCKAVVVSVNYRR-APENR--YPCAY 84 (269)
Q Consensus 18 ~~~~~~p~~--~~~~~-p~vv~~HGgg~~~~~~~~~~~~~~~-------~~l~~~~g~~v~~~d~r~-~~~~~--~~~~~ 84 (269)
...+|.|++ +++++ |.|+|+||+|- .|+.. ..... ...- +.+|-|++|-|.- ..... -....
T Consensus 175 kYrly~Pkdy~pdkky~PLvlfLHgagq-~g~dn---~~~l~sg~gaiawa~p-edqcfVlAPQy~~if~d~e~~t~~~l 249 (387)
T COG4099 175 KYRLYTPKDYAPDKKYYPLVLFLHGAGQ-GGSDN---DKVLSSGIGAIAWAGP-EDQCFVLAPQYNPIFADSEEKTLLYL 249 (387)
T ss_pred eEEEecccccCCCCccccEEEEEecCCC-CCchh---hhhhhcCccceeeecc-cCceEEEcccccccccccccccchhH
Confidence 345666654 45666 99999999883 33322 11111 1111 2255666666542 11110 11122
Q ss_pred hhHHHHHH-HHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCccc
Q 024286 85 DDGWTVLK-WAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFV 163 (269)
Q Consensus 85 ~d~~~~~~-~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~ 163 (269)
....+.+. -+.+ .+++|.+ ||.+.|.|+||+.++.++.+.|+. +++.+++++--+...
T Consensus 250 ~~~idli~~vlas---~ynID~s-RIYviGlSrG~~gt~al~~kfPdf---FAaa~~iaG~~d~v~-------------- 308 (387)
T COG4099 250 IEKIDLILEVLAS---TYNIDRS-RIYVIGLSRGGFGTWALAEKFPDF---FAAAVPIAGGGDRVY-------------- 308 (387)
T ss_pred HHHHHHHHHHHhh---ccCcccc-eEEEEeecCcchhhHHHHHhCchh---hheeeeecCCCchhh--------------
Confidence 22333333 3333 4559999 999999999999999999999888 999998887432100
Q ss_pred chHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeC
Q 024286 164 TVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLE 239 (269)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~ 239 (269)
..+.++..|+.+.|+++|.++|. ++-.+++++..+.++++..|.
T Consensus 309 --------------------------------lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 309 --------------------------------LVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred --------------------------------hhhhhccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 00111134999999999988775 466677888887778777776
No 88
>PLN02872 triacylglycerol lipase
Probab=99.58 E-value=5.6e-14 Score=116.81 Aligned_cols=105 Identities=16% Similarity=0.077 Sum_probs=70.9
Q ss_pred ccEEEEEcCCccccCCCCch----hhHHHHHHHhhcCCCEEEeeccCCCCCC----------------CCCCc-hhhHHH
Q 024286 31 VPVIIFFHGGSFAHSSANSA----IYDILCRRLVGTCKAVVVSVNYRRAPEN----------------RYPCA-YDDGWT 89 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~----~~~~~~~~l~~~~g~~v~~~d~r~~~~~----------------~~~~~-~~d~~~ 89 (269)
.|+|+++||.+. +.... ....++..|+++ ||.|+++|.|+...+ .+.+. ..|+.+
T Consensus 74 ~~~Vll~HGl~~---ss~~w~~~~~~~sla~~La~~-GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a 149 (395)
T PLN02872 74 GPPVLLQHGLFM---AGDAWFLNSPEQSLGFILADH-GFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAE 149 (395)
T ss_pred CCeEEEeCcccc---cccceeecCcccchHHHHHhC-CCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHH
Confidence 489999999432 22210 012345567777 999999999985321 01111 358899
Q ss_pred HHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCC
Q 024286 90 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 147 (269)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~ 147 (269)
+++++.+. ..+ ++.++||||||.+++.++ ..++....++.+++++|....
T Consensus 150 ~id~i~~~------~~~-~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 150 MIHYVYSI------TNS-KIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred HHHHHHhc------cCC-ceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhh
Confidence 99998764 235 899999999999998554 444433458888888888644
No 89
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.57 E-value=7.2e-14 Score=114.11 Aligned_cols=221 Identities=16% Similarity=0.062 Sum_probs=117.9
Q ss_pred ccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCch----hhHHHHHH
Q 024286 17 NIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAY----DDGWTVLK 92 (269)
Q Consensus 17 ~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~----~d~~~~~~ 92 (269)
+...+..|.+ +++.|+||++-| .- +...+.+..+...++.+ |++++++|.++.+.+...... .-...+++
T Consensus 177 I~g~LhlP~~-~~p~P~VIv~gG---lD-s~qeD~~~l~~~~l~~r-GiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd 250 (411)
T PF06500_consen 177 IPGYLHLPSG-EKPYPTVIVCGG---LD-SLQEDLYRLFRDYLAPR-GIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLD 250 (411)
T ss_dssp EEEEEEESSS-SS-EEEEEEE-----TT-S-GGGGHHHHHCCCHHC-T-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHH
T ss_pred EEEEEEcCCC-CCCCCEEEEeCC---cc-hhHHHHHHHHHHHHHhC-CCEEEEEccCCCcccccCCCCcCHHHHHHHHHH
Confidence 3345566774 455588888876 21 22233233334556777 999999999988765322122 22567889
Q ss_pred HHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHH
Q 024286 93 WAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYW 172 (269)
Q Consensus 93 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (269)
|+.+... +|.+ ||+++|.|+||++|..+|...+.+ ++++|...|.+..-... .......+. ... +.+
T Consensus 251 ~L~~~p~---VD~~-RV~~~G~SfGGy~AvRlA~le~~R---lkavV~~Ga~vh~~ft~--~~~~~~~P~---my~-d~L 317 (411)
T PF06500_consen 251 YLASRPW---VDHT-RVGAWGFSFGGYYAVRLAALEDPR---LKAVVALGAPVHHFFTD--PEWQQRVPD---MYL-DVL 317 (411)
T ss_dssp HHHHSTT---EEEE-EEEEEEETHHHHHHHHHHHHTTTT----SEEEEES---SCGGH---HHHHTTS-H---HHH-HHH
T ss_pred HHhcCCc---cChh-heEEEEeccchHHHHHHHHhcccc---eeeEeeeCchHhhhhcc--HHHHhcCCH---HHH-HHH
Confidence 9988877 8999 999999999999999999765444 99999999986432211 111111111 111 111
Q ss_pred HHhCCCCCCC------CCCCCCCCCCCCCCccCCC-CCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCc-ee
Q 024286 173 RAYLPEGANR------DHPACNPFGPKGIDLVGVK-FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQAT-IG 244 (269)
Q Consensus 173 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-H~ 244 (269)
...++-.... .....+.... ..+..-+ ..|+|.+.|++|.+.|.... ..+...+.+-+...++... |.
T Consensus 318 A~rlG~~~~~~~~l~~el~~~SLk~q--GlL~~rr~~~plL~i~~~~D~v~P~eD~--~lia~~s~~gk~~~~~~~~~~~ 393 (411)
T PF06500_consen 318 ASRLGMAAVSDESLRGELNKFSLKTQ--GLLSGRRCPTPLLAINGEDDPVSPIEDS--RLIAESSTDGKALRIPSKPLHM 393 (411)
T ss_dssp HHHCT-SCE-HHHHHHHGGGGSTTTT--TTTTSS-BSS-EEEEEETT-SSS-HHHH--HHHHHTBTT-EEEEE-SSSHHH
T ss_pred HHHhCCccCCHHHHHHHHHhcCcchh--ccccCCCCCcceEEeecCCCCCCCHHHH--HHHHhcCCCCceeecCCCcccc
Confidence 1221111000 0001111000 0010001 23999999999999997654 4455555555666666544 53
Q ss_pred eeeCCCCchHHHHHHHHHHHhhcC
Q 024286 245 FYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
..++++..+.+||++.
T Consensus 394 --------gy~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 394 --------GYPQALDEIYKWLEDK 409 (411)
T ss_dssp --------HHHHHHHHHHHHHHHH
T ss_pred --------chHHHHHHHHHHHHHh
Confidence 4688999999999875
No 90
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.56 E-value=1.3e-13 Score=101.25 Aligned_cols=177 Identities=16% Similarity=0.128 Sum_probs=124.2
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCC-----C----------------CCCCchhhHHHH
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE-----N----------------RYPCAYDDGWTV 90 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~-----~----------------~~~~~~~d~~~~ 90 (269)
-+|||+||-|- +... |..+++.+... +..-++|.-+.-+. . ........+.+.
T Consensus 4 atIi~LHglGD---sg~~--~~~~~~~l~l~-NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~ 77 (206)
T KOG2112|consen 4 ATIIFLHGLGD---SGSG--WAQFLKQLPLP-NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADN 77 (206)
T ss_pred EEEEEEecCCC---CCcc--HHHHHHcCCCC-CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHH
Confidence 58999999553 1111 56667776666 77788775331110 0 011223445667
Q ss_pred HHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHH
Q 024286 91 LKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDW 170 (269)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (269)
+.++.++....++..+ +|++.|.||||.+|++.+..++.. +.|+...++++..... .+...
T Consensus 78 i~~Li~~e~~~Gi~~~-rI~igGfs~G~a~aL~~~~~~~~~---l~G~~~~s~~~p~~~~-----~~~~~---------- 138 (206)
T KOG2112|consen 78 IANLIDNEPANGIPSN-RIGIGGFSQGGALALYSALTYPKA---LGGIFALSGFLPRASI-----GLPGW---------- 138 (206)
T ss_pred HHHHHHHHHHcCCCcc-ceeEcccCchHHHHHHHHhccccc---cceeeccccccccchh-----hccCC----------
Confidence 7777777667779999 999999999999999999988554 8888888888742210 00000
Q ss_pred HHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeCCCceeeeeC
Q 024286 171 YWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIGFYFL 248 (269)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 248 (269)
. ...+.+|++..||+.|+++|. .....+.++..+.+++++.|+|.+|..
T Consensus 139 --------------~------------~~~~~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~--- 189 (206)
T KOG2112|consen 139 --------------L------------PGVNYTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHST--- 189 (206)
T ss_pred --------------c------------cccCcchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccc---
Confidence 0 000034999999999999985 577778899999899999999999964
Q ss_pred CCCchHHHHHHHHHHHhhc
Q 024286 249 PNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 249 ~~~~~~~~~~~~i~~fl~~ 267 (269)
..+.++++..|+++
T Consensus 190 -----~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 190 -----SPQELDDLKSWIKT 203 (206)
T ss_pred -----cHHHHHHHHHHHHH
Confidence 56778899999875
No 91
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.56 E-value=5.8e-14 Score=106.48 Aligned_cols=205 Identities=13% Similarity=0.072 Sum_probs=125.1
Q ss_pred CCccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC-----------CCC--
Q 024286 15 RPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-----------RYP-- 81 (269)
Q Consensus 15 ~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-----------~~~-- 81 (269)
.++.-++..|...+++.|.||..||.+ . +... |..++ .|+.. ||+|+.+|.|+.+.+ +.+
T Consensus 67 ~rI~gwlvlP~~~~~~~P~vV~fhGY~--g-~~g~--~~~~l-~wa~~-Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~ 139 (321)
T COG3458 67 ARIKGWLVLPRHEKGKLPAVVQFHGYG--G-RGGE--WHDML-HWAVA-GYAVFVMDVRGQGSSSQDTADPPGGPSDPGF 139 (321)
T ss_pred ceEEEEEEeecccCCccceEEEEeecc--C-CCCC--ccccc-ccccc-ceeEEEEecccCCCccccCCCCCCCCcCCce
Confidence 556778889998878889999999933 1 2211 22222 56667 999999999976432 111
Q ss_pred ---------------CchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 82 ---------------CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 82 ---------------~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
.-..|+..++.-+.+... +|.+ ||++.|.|.||.||+..+... .+++++++.+|+++
T Consensus 140 mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~---vde~-Ri~v~G~SqGGglalaaaal~----~rik~~~~~~Pfl~ 211 (321)
T COG3458 140 MTRGILDRKDTYYYRGVFLDAVRAVEILASLDE---VDEE-RIGVTGGSQGGGLALAAAALD----PRIKAVVADYPFLS 211 (321)
T ss_pred eEeecccCCCceEEeeehHHHHHHHHHHhccCc---cchh-heEEeccccCchhhhhhhhcC----hhhhcccccccccc
Confidence 113578888888887766 8999 999999999999999888753 34899999999986
Q ss_pred CCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCC--CCCCCCccCCCCCceeEEecCCCcChhHHHHHHH
Q 024286 147 GQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPF--GPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYME 224 (269)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~ 224 (269)
.-...-... .. .....+..+.+..-+.. ..-....+.+ ...+..++ .|+|+..|-.|.+++++..|+.
T Consensus 212 df~r~i~~~--~~---~~ydei~~y~k~h~~~e-~~v~~TL~yfD~~n~A~RiK----~pvL~svgL~D~vcpPstqFA~ 281 (321)
T COG3458 212 DFPRAIELA--TE---GPYDEIQTYFKRHDPKE-AEVFETLSYFDIVNLAARIK----VPVLMSVGLMDPVCPPSTQFAA 281 (321)
T ss_pred cchhheeec--cc---CcHHHHHHHHHhcCchH-HHHHHHHhhhhhhhHHHhhc----cceEEeecccCCCCCChhhHHH
Confidence 432211110 00 00011111111111000 0000000000 00112222 3999999999999998877654
Q ss_pred HHHHCCCCeEEEEeCCCceee
Q 024286 225 GLKKAGQDVKLLYLEQATIGF 245 (269)
Q Consensus 225 ~l~~~~~~~~~~~~~~~~H~~ 245 (269)
.-+ .-.+.++.+|+.-+|.-
T Consensus 282 yN~-l~~~K~i~iy~~~aHe~ 301 (321)
T COG3458 282 YNA-LTTSKTIEIYPYFAHEG 301 (321)
T ss_pred hhc-ccCCceEEEeecccccc
Confidence 433 23455788888888953
No 92
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.56 E-value=5.3e-13 Score=104.86 Aligned_cols=219 Identities=14% Similarity=0.064 Sum_probs=122.4
Q ss_pred cccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC------CchhhHHHHHHHHHhcccccCC
Q 024286 30 VVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP------CAYDDGWTVLKWAKSRSWLQSK 103 (269)
Q Consensus 30 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~------~~~~d~~~~~~~~~~~~~~~~~ 103 (269)
+.|.++++|| ..|+... |..+...|+...+..|+++|.|.++.++.. ...+|+...++++... .
T Consensus 51 ~~Pp~i~lHG---l~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~-----~ 120 (315)
T KOG2382|consen 51 RAPPAIILHG---LLGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGS-----T 120 (315)
T ss_pred CCCceEEecc---cccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccc-----c
Confidence 3499999999 7777765 899999999998999999999988876543 2344555555555432 1
Q ss_pred CCCccEEEeecCchH-HHHHHHHHHhhhccccccceeee--CCccCCCCCCchhhhhc---CCccc--------------
Q 024286 104 DSKAHIYLAGDSSGG-NIVHHVALRAVESEVEILGNILL--NPMFGGQERTESEKRLD---GKYFV-------------- 163 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg-~la~~~a~~~~~~~~~~~~~i~~--~p~~~~~~~~~~~~~~~---~~~~~-------------- 163 (269)
... ++.|.|||||| -+++..+.+.+.. +..+|.. +|..-..........+. ..+..
T Consensus 121 ~~~-~~~l~GHsmGG~~~~m~~t~~~p~~---~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l 196 (315)
T KOG2382|consen 121 RLD-PVVLLGHSMGGVKVAMAETLKKPDL---IERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSL 196 (315)
T ss_pred ccC-CceecccCcchHHHHHHHHHhcCcc---cceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHH
Confidence 233 89999999999 5555555554443 4333332 34211111111100000 00000
Q ss_pred ----chHHH-HHHHHHhCCCCCCCCC-CCCCC------CCC--CCCCccCC---C-CCceeEEecCCCcChhHHHHHHHH
Q 024286 164 ----TVQDR-DWYWRAYLPEGANRDH-PACNP------FGP--KGIDLVGV---K-FPKSLVVVAGLDLIQDWQLAYMEG 225 (269)
Q Consensus 164 ----~~~~~-~~~~~~~~~~~~~~~~-~~~~~------~~~--~~~~~~~~---~-~~P~li~~G~~D~~~~~~~~~~~~ 225 (269)
..... .+....+-+....... +.... +.. ....+..+ . .-|+|+++|.++.+++.. ....
T Consensus 197 ~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~--~~~~ 274 (315)
T KOG2382|consen 197 IEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDE--HYPR 274 (315)
T ss_pred HHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChh--HHHH
Confidence 00000 1111111100000000 00000 000 00111111 1 339999999999998753 1234
Q ss_pred HHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 226 LKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 226 l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
++..-+.+++++++++||..+. +.++++++.+.+|++++
T Consensus 275 ~~~~fp~~e~~~ld~aGHwVh~----E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 275 MEKIFPNVEVHELDEAGHWVHL----EKPEEFIESISEFLEEP 313 (315)
T ss_pred HHHhccchheeecccCCceeec----CCHHHHHHHHHHHhccc
Confidence 4444456899999999998754 46899999999999864
No 93
>PRK05855 short chain dehydrogenase; Validated
Probab=99.55 E-value=1e-13 Score=122.63 Aligned_cols=85 Identities=15% Similarity=0.125 Sum_probs=56.7
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC-----chhhHHHHHHHHHhcccccCCCC
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC-----AYDDGWTVLKWAKSRSWLQSKDS 105 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-----~~~d~~~~~~~~~~~~~~~~~~~ 105 (269)
.|+||++||.+. + ...|..++..|+ + +|.|+++|+|+++.+..+. ..++..+.+..+.+. ...
T Consensus 25 ~~~ivllHG~~~---~--~~~w~~~~~~L~-~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~-----l~~ 92 (582)
T PRK05855 25 RPTVVLVHGYPD---N--HEVWDGVAPLLA-D-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDA-----VSP 92 (582)
T ss_pred CCeEEEEcCCCc---h--HHHHHHHHHHhh-c-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHH-----hCC
Confidence 489999999432 2 233778888884 5 8999999999998764322 123333333333332 122
Q ss_pred CccEEEeecCchHHHHHHHHHH
Q 024286 106 KAHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 106 ~~~i~l~G~S~Gg~la~~~a~~ 127 (269)
..++.|+||||||.+++.++.+
T Consensus 93 ~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 93 DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred CCcEEEEecChHHHHHHHHHhC
Confidence 3159999999999999888765
No 94
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.54 E-value=4.8e-13 Score=101.21 Aligned_cols=128 Identities=20% Similarity=0.305 Sum_probs=95.8
Q ss_pred CCCCCccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHH
Q 024286 12 EEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVL 91 (269)
Q Consensus 12 ~~~~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~ 91 (269)
+...+.-+-|+.|..... +|+|+|+|| |. .....|..+++.+++. ||.|++|+.-..-.....+.++++.+++
T Consensus 28 ~~spPkpLlI~tP~~~G~-yPVilF~HG--~~---l~ns~Ys~lL~HIASH-GfIVVAPQl~~~~~p~~~~Ei~~aa~V~ 100 (307)
T PF07224_consen 28 SPSPPKPLLIVTPSEAGT-YPVILFLHG--FN---LYNSFYSQLLAHIASH-GFIVVAPQLYTLFPPDGQDEIKSAASVI 100 (307)
T ss_pred CCCCCCCeEEecCCcCCC-ccEEEEeec--hh---hhhHHHHHHHHHHhhc-CeEEEechhhcccCCCchHHHHHHHHHH
Confidence 444566677777766554 499999999 53 3345589999999999 9999999955332233445677889999
Q ss_pred HHHHhccccc-----CCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCC
Q 024286 92 KWAKSRSWLQ-----SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQ 148 (269)
Q Consensus 92 ~~~~~~~~~~-----~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~ 148 (269)
+|+.+..... ..+.. +++++|||.||-.|..+|+.+. ....++++|.+-|+-...
T Consensus 101 ~WL~~gL~~~Lp~~V~~nl~-klal~GHSrGGktAFAlALg~a-~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 101 NWLPEGLQHVLPENVEANLS-KLALSGHSRGGKTAFALALGYA-TSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHHHhhhhhhCCCCcccccc-eEEEeecCCccHHHHHHHhccc-ccCchhheecccccCCCC
Confidence 9998752211 15677 9999999999999999999765 456789999999886543
No 95
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.53 E-value=4.5e-13 Score=101.93 Aligned_cols=107 Identities=18% Similarity=0.159 Sum_probs=74.4
Q ss_pred cccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCC--CCCC----------CCCchhhHHHHHHHHHhc
Q 024286 30 VVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA--PENR----------YPCAYDDGWTVLKWAKSR 97 (269)
Q Consensus 30 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~--~~~~----------~~~~~~d~~~~~~~~~~~ 97 (269)
+.|+||++||.+- +.....-..-+..++++.||.|+.|+-... .... -......+...++++.++
T Consensus 15 ~~PLVv~LHG~~~---~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~ 91 (220)
T PF10503_consen 15 PVPLVVVLHGCGQ---SAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAAR 91 (220)
T ss_pred CCCEEEEeCCCCC---CHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhh
Confidence 4599999999553 322111112245788888999999984321 1110 011233456677777765
Q ss_pred ccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 98 SWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 98 ~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
.. +|++ ||++.|+|+||+++..++..+++. |.++...++...
T Consensus 92 ~~---iD~~-RVyv~G~S~Gg~ma~~la~~~pd~---faa~a~~sG~~~ 133 (220)
T PF10503_consen 92 YN---IDPS-RVYVTGLSNGGMMANVLACAYPDL---FAAVAVVSGVPY 133 (220)
T ss_pred cc---cCCC-ceeeEEECHHHHHHHHHHHhCCcc---ceEEEeeccccc
Confidence 54 9999 999999999999999999998887 888888887643
No 96
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.53 E-value=2.4e-13 Score=99.66 Aligned_cols=189 Identities=17% Similarity=0.193 Sum_probs=114.7
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC-------CCCchhhHHHHHHHHHhcccccCCC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-------YPCAYDDGWTVLKWAKSRSWLQSKD 104 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-------~~~~~~d~~~~~~~~~~~~~~~~~~ 104 (269)
-+||++|| +...+....+...+.+|++. |+.++.+|+++.+++. +....+|+..+++++.+. +
T Consensus 34 e~vvlcHG---frS~Kn~~~~~~vA~~~e~~-gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~------n 103 (269)
T KOG4667|consen 34 EIVVLCHG---FRSHKNAIIMKNVAKALEKE-GISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS------N 103 (269)
T ss_pred eEEEEeec---cccccchHHHHHHHHHHHhc-CceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC------c
Confidence 58999999 44566666567778889888 9999999999887652 334568999999999774 2
Q ss_pred CCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCC------chhhhhcCCcccchHH------HHHHH
Q 024286 105 SKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT------ESEKRLDGKYFVTVQD------RDWYW 172 (269)
Q Consensus 105 ~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~ 172 (269)
.- --+|+|||-||.+++.++.++.+ +.-+|-.++-.+....- .........-+++... ..+..
T Consensus 104 r~-v~vi~gHSkGg~Vvl~ya~K~~d----~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~ 178 (269)
T KOG4667|consen 104 RV-VPVILGHSKGGDVVLLYASKYHD----IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTE 178 (269)
T ss_pred eE-EEEEEeecCccHHHHHHHHhhcC----chheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecH
Confidence 22 34789999999999999999865 55566666554432211 1111000000000000 00000
Q ss_pred HHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeCCCceeeeeC
Q 024286 173 RAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIGFYFL 248 (269)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~ 248 (269)
+..+ .....+....+ ..+. +.+|+|-+||..|.++|. +..|++.+.. .+++++||+.|+|+..
T Consensus 179 eSlm-drLntd~h~ac------lkId--~~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 179 ESLM-DRLNTDIHEAC------LKID--KQCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIEGADHNYTGH 243 (269)
T ss_pred HHHH-HHHhchhhhhh------cCcC--ccCceEEEeccCCceeechhHHHHHHhccC----CceEEecCCCcCccch
Confidence 0000 00000000000 1111 156999999999999885 4555555543 6899999999998643
No 97
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.51 E-value=1.6e-12 Score=108.82 Aligned_cols=188 Identities=15% Similarity=0.047 Sum_probs=117.0
Q ss_pred ccccccccCCC-CCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCC----CEEEeeccCCCCCC--CCC---Cchhh
Q 024286 17 NIAELEKPVSS-EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCK----AVVVSVNYRRAPEN--RYP---CAYDD 86 (269)
Q Consensus 17 ~~~~~~~p~~~-~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g----~~v~~~d~r~~~~~--~~~---~~~~d 86 (269)
-.+.||.|.+- ++++|+|+++||..|..... ....+..|..+ | ..++.+|....... .++ .....
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~----~~~~ld~li~~-g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~ 268 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMP----VWPALDSLTHR-GQLPPAVYLLIDAIDTTHRSQELPCNADFWLA 268 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCC----HHHHHHHHHHc-CCCCceEEEEECCCCcccccccCCchHHHHHH
Confidence 45788888763 45689999999988743221 23445555554 5 44677774211111 111 11122
Q ss_pred H-HHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccch
Q 024286 87 G-WTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTV 165 (269)
Q Consensus 87 ~-~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~ 165 (269)
+ .+.+-++.++.. ...+++ +.+|+|+||||..|+.+++++++. +.+++++||.+....... . .
T Consensus 269 l~~eLlP~I~~~y~-~~~d~~-~~~IaG~S~GGl~AL~~al~~Pd~---Fg~v~s~Sgs~ww~~~~~-----~-----~- 332 (411)
T PRK10439 269 VQQELLPQVRAIAP-FSDDAD-RTVVAGQSFGGLAALYAGLHWPER---FGCVLSQSGSFWWPHRGG-----Q-----Q- 332 (411)
T ss_pred HHHHHHHHHHHhCC-CCCCcc-ceEEEEEChHHHHHHHHHHhCccc---ccEEEEeccceecCCccC-----C-----c-
Confidence 2 344555555422 225778 999999999999999999998887 999999999764321100 0 0
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCC-cChhHHHHHHHHHHHCCCCeEEEEeCCCcee
Q 024286 166 QDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLD-LIQDWQLAYMEGLKKAGQDVKLLYLEQATIG 244 (269)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 244 (269)
..+..+.... .. .. .. ...++|.+|+.| .++..++++.+.|++.|.++++.+++| ||.
T Consensus 333 --~~~l~~~l~~-~~---~~-----------~~---~lr~~i~~G~~E~~~~~~~~~l~~~L~~~G~~~~~~~~~G-GHd 391 (411)
T PRK10439 333 --EGVLLEQLKA-GE---VS-----------AR---GLRIVLEAGRREPMIMRANQALYAQLHPAGHSVFWRQVDG-GHD 391 (411)
T ss_pred --hhHHHHHHHh-cc---cC-----------CC---CceEEEeCCCCCchHHHHHHHHHHHHHHCCCcEEEEECCC-CcC
Confidence 0011111100 00 00 00 126899999988 455677999999999999999999998 797
Q ss_pred ee
Q 024286 245 FY 246 (269)
Q Consensus 245 ~~ 246 (269)
+.
T Consensus 392 ~~ 393 (411)
T PRK10439 392 AL 393 (411)
T ss_pred HH
Confidence 54
No 98
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.51 E-value=1.7e-12 Score=96.55 Aligned_cols=181 Identities=17% Similarity=0.143 Sum_probs=98.3
Q ss_pred EEEEcCCccccCCCCchhhHHHHHHHhhcCC--CEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEE
Q 024286 34 IIFFHGGSFAHSSANSAIYDILCRRLVGTCK--AVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 111 (269)
Q Consensus 34 vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g--~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l 111 (269)
|+|+|| |.+ +..+.....+.+.++.. + ..+.+++++. ...++.+.+.-+.+. ..++ .+.|
T Consensus 2 ilYlHG--F~S-sp~S~Ka~~l~~~~~~~-~~~~~~~~p~l~~--------~p~~a~~~l~~~i~~-----~~~~-~~~l 63 (187)
T PF05728_consen 2 ILYLHG--FNS-SPQSFKAQALKQYFAEH-GPDIQYPCPDLPP--------FPEEAIAQLEQLIEE-----LKPE-NVVL 63 (187)
T ss_pred eEEecC--CCC-CCCCHHHHHHHHHHHHh-CCCceEECCCCCc--------CHHHHHHHHHHHHHh-----CCCC-CeEE
Confidence 799999 433 44444344445555554 4 4455555432 223344444444443 3445 6999
Q ss_pred eecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 024286 112 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFG 191 (269)
Q Consensus 112 ~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (269)
+|.||||+.|.+++.++. +++ |+++|.+.................. .... .+... ..
T Consensus 64 iGSSlGG~~A~~La~~~~-----~~a-vLiNPav~p~~~l~~~iG~~~~~~~-~e~~--~~~~~--------------~~ 120 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYG-----LPA-VLINPAVRPYELLQDYIGEQTNPYT-GESY--ELTEE--------------HI 120 (187)
T ss_pred EEEChHHHHHHHHHHHhC-----CCE-EEEcCCCCHHHHHHHhhCccccCCC-Cccc--eechH--------------hh
Confidence 999999999999998763 344 9999988644321111100000000 0000 00000 00
Q ss_pred CCCCCccC--CC-CCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhh
Q 024286 192 PKGIDLVG--VK-FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 192 ~~~~~~~~--~~-~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~ 266 (269)
...+.+.. .. ..++++++++.|++++..+. ..+.+ .+...+.+|++|.|. ..++.+..|++|+.
T Consensus 121 ~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a-~~~~~----~~~~~i~~ggdH~f~------~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 121 EELKALEVPYPTNPERYLVLLQTGDEVLDYREA-VAKYR----GCAQIIEEGGDHSFQ------DFEEYLPQIIAFLQ 187 (187)
T ss_pred hhcceEeccccCCCccEEEEEecCCcccCHHHH-HHHhc----CceEEEEeCCCCCCc------cHHHHHHHHHHhhC
Confidence 00001110 11 12899999999999987433 22332 234556788899764 46788889999974
No 99
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.51 E-value=2.6e-12 Score=110.02 Aligned_cols=118 Identities=13% Similarity=0.163 Sum_probs=75.6
Q ss_pred cccCCCCCcccEEEEEcCCccccCCCCc---hhhHHHHHHHhhcCCCEEEeeccCCCCCCCC----CCch-hhHHHHHHH
Q 024286 22 EKPVSSEVVVPVIIFFHGGSFAHSSANS---AIYDILCRRLVGTCKAVVVSVNYRRAPENRY----PCAY-DDGWTVLKW 93 (269)
Q Consensus 22 ~~p~~~~~~~p~vv~~HGgg~~~~~~~~---~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~----~~~~-~d~~~~~~~ 93 (269)
|.|.......+.||++|| ++. .... ..-..+++.|+++ ||.|+++|+|+.+.+.. .+.. +++.++++.
T Consensus 179 Y~P~t~~~~~~PlLiVp~--~i~-k~yilDL~p~~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~ 254 (532)
T TIGR01838 179 YEPTTETVHKTPLLIVPP--WIN-KYYILDLRPQNSLVRWLVEQ-GHTVFVISWRNPDASQADKTFDDYIRDGVIAALEV 254 (532)
T ss_pred eCCCCCcCCCCcEEEECc--ccc-cceeeecccchHHHHHHHHC-CcEEEEEECCCCCcccccCChhhhHHHHHHHHHHH
Confidence 344443333478999999 321 1111 0014688889988 99999999998764422 2222 347778888
Q ss_pred HHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhc--cccccceeeeCCccCCCC
Q 024286 94 AKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES--EVEILGNILLNPMFGGQE 149 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~--~~~~~~~i~~~p~~~~~~ 149 (269)
+.+. .+.+ ++.++||||||.+++.++..+... ...++++++++..++...
T Consensus 255 v~~~-----~g~~-kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 255 VEAI-----TGEK-QVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSD 306 (532)
T ss_pred HHHh-----cCCC-CeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCC
Confidence 8765 4556 999999999999864322211111 235899999988777553
No 100
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.51 E-value=5e-14 Score=107.86 Aligned_cols=172 Identities=16% Similarity=0.074 Sum_probs=90.7
Q ss_pred hhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhc-CCcc
Q 024286 84 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLD-GKYF 162 (269)
Q Consensus 84 ~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~-~~~~ 162 (269)
++-..++++|+++... ++.+ +|+|+|.|.||-+|+.+|.+.+ .++++|+.+|..-............ ..+.
T Consensus 3 LEyfe~Ai~~L~~~p~---v~~~-~Igi~G~SkGaelALllAs~~~----~i~avVa~~ps~~~~~~~~~~~~~~~~lp~ 74 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPE---VDPD-KIGIIGISKGAELALLLASRFP----QISAVVAISPSSVVFQGIGFYRDSSKPLPY 74 (213)
T ss_dssp CHHHHHHHHHHHCSTT---B--S-SEEEEEETHHHHHHHHHHHHSS----SEEEEEEES--SB--SSEEEETTE--EE--
T ss_pred hHHHHHHHHHHHhCCC---CCCC-CEEEEEECHHHHHHHHHHhcCC----CccEEEEeCCceeEecchhcccCCCccCCc
Confidence 3556889999999877 8888 9999999999999999999876 3999999987653222111000000 0000
Q ss_pred cchHHHHHHHHHhCCCCCCC----CCCCCCCCCC---CCCCccCCCCCceeEEecCCCcChhH---HHHHHHHHHHCCCC
Q 024286 163 VTVQDRDWYWRAYLPEGANR----DHPACNPFGP---KGIDLVGVKFPKSLVVVAGLDLIQDW---QLAYMEGLKKAGQD 232 (269)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~P~li~~G~~D~~~~~---~~~~~~~l~~~~~~ 232 (269)
.........+ ..+..... .......... ...++ ..|+|++.|++|.+.|. +..+.++|++.+.+
T Consensus 75 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i----~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~ 148 (213)
T PF08840_consen 75 LPFDISKFSW--NEPGLLRSRYAFELADDKAVEEARIPVEKI----KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFP 148 (213)
T ss_dssp --B-GGG-EE---TTS-EE-TT-B--TTTGGGCCCB--GGG------SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT--
T ss_pred CCcChhhcee--cCCcceehhhhhhcccccccccccccHHHc----CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCC
Confidence 0000000000 00000000 0000000000 01112 34999999999988764 45666788888754
Q ss_pred --eEEEEeCCCceeeeeC--CCC----------------------chHHHHHHHHHHHhhcCC
Q 024286 233 --VKLLYLEQATIGFYFL--PNN----------------------GHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 233 --~~~~~~~~~~H~~~~~--~~~----------------------~~~~~~~~~i~~fl~~~~ 269 (269)
++.+.|+++||.+..- +.. ...++++.++++||++++
T Consensus 149 ~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L 211 (213)
T PF08840_consen 149 HNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHL 211 (213)
T ss_dssp ---EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 8899999999986421 110 135688999999999875
No 101
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.50 E-value=9.9e-13 Score=115.00 Aligned_cols=120 Identities=13% Similarity=0.100 Sum_probs=87.0
Q ss_pred ccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC-----C-CCchhhHHHH
Q 024286 17 NIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-----Y-PCAYDDGWTV 90 (269)
Q Consensus 17 ~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----~-~~~~~d~~~~ 90 (269)
...++++|++.+ +.|+||++||.+...... ..........|+++ ||+|+++|+|+++.+. . ....+|+.++
T Consensus 9 L~~~~~~P~~~~-~~P~Il~~~gyg~~~~~~-~~~~~~~~~~l~~~-Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~ 85 (550)
T TIGR00976 9 LAIDVYRPAGGG-PVPVILSRTPYGKDAGLR-WGLDKTEPAWFVAQ-GYAVVIQDTRGRGASEGEFDLLGSDEAADGYDL 85 (550)
T ss_pred EEEEEEecCCCC-CCCEEEEecCCCCchhhc-cccccccHHHHHhC-CcEEEEEeccccccCCCceEecCcccchHHHHH
Confidence 345678887543 459999999955321100 00112345678888 9999999999886652 2 4567899999
Q ss_pred HHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCC
Q 024286 91 LKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 147 (269)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~ 147 (269)
++|+.++.. ... +|+++|+|+||.+++.+|...+.. +++++..+++.+.
T Consensus 86 i~~l~~q~~----~~~-~v~~~G~S~GG~~a~~~a~~~~~~---l~aiv~~~~~~d~ 134 (550)
T TIGR00976 86 VDWIAKQPW----CDG-NVGMLGVSYLAVTQLLAAVLQPPA---LRAIAPQEGVWDL 134 (550)
T ss_pred HHHHHhCCC----CCC-cEEEEEeChHHHHHHHHhccCCCc---eeEEeecCcccch
Confidence 999988743 335 899999999999999999875544 8999998888654
No 102
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.50 E-value=2.3e-13 Score=103.73 Aligned_cols=99 Identities=24% Similarity=0.302 Sum_probs=74.5
Q ss_pred ccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCc--------hhhHH
Q 024286 17 NIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCA--------YDDGW 88 (269)
Q Consensus 17 ~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~--------~~d~~ 88 (269)
..+++|+-.......|++++.||||+ +.-+ |..+++.+.+...+.++++|.|++++....+. .+|+-
T Consensus 60 ~t~n~Y~t~~~~t~gpil~l~HG~G~---S~LS--fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~ 134 (343)
T KOG2564|consen 60 LTFNVYLTLPSATEGPILLLLHGGGS---SALS--FAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFG 134 (343)
T ss_pred ceEEEEEecCCCCCccEEEEeecCcc---cchh--HHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHH
Confidence 36777876654555699999999986 4433 89999999998789999999999998876543 23444
Q ss_pred HHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHH
Q 024286 89 TVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~ 127 (269)
+.++++-. -.+. +|+|+||||||.||.+.|..
T Consensus 135 ~~i~~~fg------e~~~-~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 135 AVIKELFG------ELPP-QIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred HHHHHHhc------cCCC-ceEEEeccccchhhhhhhhh
Confidence 44433322 3556 89999999999999888875
No 103
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.48 E-value=3.3e-12 Score=114.50 Aligned_cols=203 Identities=15% Similarity=0.079 Sum_probs=120.1
Q ss_pred HHHHHHhhcCCCEEEeeccCCCCCCC------CCCchhhHHHHHHHHHhccc-----------ccCCCCCccEEEeecCc
Q 024286 54 ILCRRLVGTCKAVVVSVNYRRAPENR------YPCAYDDGWTVLKWAKSRSW-----------LQSKDSKAHIYLAGDSS 116 (269)
Q Consensus 54 ~~~~~l~~~~g~~v~~~d~r~~~~~~------~~~~~~d~~~~~~~~~~~~~-----------~~~~~~~~~i~l~G~S~ 116 (269)
.+.+.|+.+ ||+|+..|.|+...+. .+...+|..++|+|+..+.. +..-... +|+++|.|+
T Consensus 270 ~~~~~~~~r-GYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnG-kVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPR-GFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNG-KVAMTGKSY 347 (767)
T ss_pred hHHHHHHhC-CeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCC-eeEEEEEcH
Confidence 345778877 9999999999876542 13456789999999985421 0112245 999999999
Q ss_pred hHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchh--hhhcCCc-ccchH-----------------HHHHHHHHhC
Q 024286 117 GGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESE--KRLDGKY-FVTVQ-----------------DRDWYWRAYL 176 (269)
Q Consensus 117 Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~--~~~~~~~-~~~~~-----------------~~~~~~~~~~ 176 (269)
||++++.+|...+.. ++++|..+++.+........ ....... ..... .....+....
T Consensus 348 ~G~~~~~aAa~~pp~---LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~ 424 (767)
T PRK05371 348 LGTLPNAVATTGVEG---LETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLL 424 (767)
T ss_pred HHHHHHHHHhhCCCc---ceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHH
Confidence 999999998876554 89999988876543211000 0000000 00000 0000000000
Q ss_pred C---CCCCCC------CCCCCCCCCCCCCccCCCCCceeEEecCCCcChh--HHHHHHHHHHHCCCCeEEEEeCCCceee
Q 024286 177 P---EGANRD------HPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLEQATIGF 245 (269)
Q Consensus 177 ~---~~~~~~------~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 245 (269)
. ...... +.....+......+ ..|+|++||..|..++ .+.++.+++++.+.+.++.+.++ +|..
T Consensus 425 ~~~~~~~~~~~~~y~~fW~~rn~~~~~~kI----kvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~ 499 (767)
T PRK05371 425 AELTAAQDRKTGDYNDFWDDRNYLKDADKI----KASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG-GHVY 499 (767)
T ss_pred hhhhhhhhhcCCCccHHHHhCCHhhHhhCC----CCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC-CccC
Confidence 0 000000 00000001111222 2499999999999875 45778899998888888888776 7864
Q ss_pred eeCCCCchHHHHHHHHHHHhhcCC
Q 024286 246 YFLPNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~fl~~~~ 269 (269)
.. .....+..+.+.+|+.+++
T Consensus 500 ~~---~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 500 PN---NWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred CC---chhHHHHHHHHHHHHHhcc
Confidence 32 2235677888899998764
No 104
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.45 E-value=1.7e-12 Score=103.33 Aligned_cols=109 Identities=17% Similarity=0.199 Sum_probs=75.3
Q ss_pred CCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCc-------hhhHHHHHHHHHhcccc
Q 024286 28 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCA-------YDDGWTVLKWAKSRSWL 100 (269)
Q Consensus 28 ~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~-------~~d~~~~~~~~~~~~~~ 100 (269)
+...|++|++|| |.. +....+...+...+....++.|+++|++......++.. .+++...++++.+...
T Consensus 33 ~~~~p~vilIHG--~~~-~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g- 108 (275)
T cd00707 33 NPSRPTRFIIHG--WTS-SGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTG- 108 (275)
T ss_pred CCCCCcEEEEcC--CCC-CCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcC-
Confidence 344499999999 432 33223234455555554389999999997644333322 2355666677665432
Q ss_pred cCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 101 QSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 101 ~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
.+.+ +++|+||||||.+|..++.+.+++ +++++++.|...
T Consensus 109 --~~~~-~i~lIGhSlGa~vAg~~a~~~~~~---v~~iv~LDPa~p 148 (275)
T cd00707 109 --LSLE-NVHLIGHSLGAHVAGFAGKRLNGK---LGRITGLDPAGP 148 (275)
T ss_pred --CChH-HEEEEEecHHHHHHHHHHHHhcCc---cceeEEecCCcc
Confidence 5667 999999999999999999887654 999999987753
No 105
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.43 E-value=1.1e-12 Score=102.90 Aligned_cols=226 Identities=15% Similarity=0.041 Sum_probs=82.1
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccC----CCCCCCCCCchhhHHHHHHHHHhcccccCCCCCc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR----RAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKA 107 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 107 (269)
.+||||-|=+ -|-........+++.|... ||.|+-+..+ +.+.++.....+|+.++++|++..... ....+
T Consensus 34 ~~llfIGGLt--DGl~tvpY~~~La~aL~~~-~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g-~~~~~- 108 (303)
T PF08538_consen 34 NALLFIGGLT--DGLLTVPYLPDLAEALEET-GWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGG-HFGRE- 108 (303)
T ss_dssp SEEEEE--TT----TT-STCHHHHHHHHT-T-T-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS-------S-
T ss_pred cEEEEECCCC--CCCCCCchHHHHHHHhccC-CeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhcc-ccCCc-
Confidence 6999998811 1222222245666666555 9999988855 556666777889999999999987310 02456
Q ss_pred cEEEeecCchHHHHHHHHHHhhh--ccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHh--------CC
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVE--SEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAY--------LP 177 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~--~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 177 (269)
+|+|+|||-|.--++.++.+... ....|+|+|+.+|+.|.......... . . ..........+.. ++
T Consensus 109 kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~-~-~--~~~~~v~~A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 109 KIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE-R-E--AYEELVALAKELIAEGKGDEILP 184 (303)
T ss_dssp -EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH-------HHHHHHHHHHHHHCT-TT-GG-
T ss_pred cEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc-h-H--HHHHHHHHHHHHHHcCCCCceee
Confidence 99999999999999999987643 23679999999999876644322111 0 0 0000000000000 00
Q ss_pred CCCCCC----CCC-----CCCCCC---------CC--CCc-cCCC--CCceeEEecCCCcChhHH---HHHHHHHHHCCC
Q 024286 178 EGANRD----HPA-----CNPFGP---------KG--IDL-VGVK--FPKSLVVVAGLDLIQDWQ---LAYMEGLKKAGQ 231 (269)
Q Consensus 178 ~~~~~~----~~~-----~~~~~~---------~~--~~~-~~~~--~~P~li~~G~~D~~~~~~---~~~~~~l~~~~~ 231 (269)
...... .+. .+...+ .. ..+ +.+. ..|+|++.+++|..+|.. .++.++.+....
T Consensus 185 ~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~ 264 (303)
T PF08538_consen 185 REFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATN 264 (303)
T ss_dssp ---GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT--------------------
T ss_pred ccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccc
Confidence 000000 000 000000 00 000 1111 239999999999998863 333344443322
Q ss_pred ----CeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhh
Q 024286 232 ----DVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 232 ----~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~ 266 (269)
...--++||++|.+......+..+.+.+++..||+
T Consensus 265 ~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 265 PKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccCC
Confidence 22355899999987644333335578888888875
No 106
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.41 E-value=4.9e-13 Score=97.11 Aligned_cols=220 Identities=12% Similarity=0.029 Sum_probs=130.5
Q ss_pred ccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC-------chhhHHHHHHH
Q 024286 21 LEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC-------AYDDGWTVLKW 93 (269)
Q Consensus 21 ~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-------~~~d~~~~~~~ 93 (269)
+-.-+.+.+. ..|+++.| ..|+.... |...+..+....-+++++.|-++.+.+.-|+ ..+|+..+++-
T Consensus 33 l~y~~~G~G~-~~iLlipG---alGs~~tD-f~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdL 107 (277)
T KOG2984|consen 33 LGYCKYGHGP-NYILLIPG---ALGSYKTD-FPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDL 107 (277)
T ss_pred eeeeecCCCC-ceeEeccc---cccccccc-CCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHH
Confidence 3333444455 68999998 44443332 7787777777756999999988776553222 23577777766
Q ss_pred HHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCC-chh---hhhc------CC---
Q 024286 94 AKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT-ESE---KRLD------GK--- 160 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~-~~~---~~~~------~~--- 160 (269)
+.. .+.+ ++.|+|+|-||..|+.+|.++++. +...|.+....-..... ... +... ..
T Consensus 108 M~a------Lk~~-~fsvlGWSdGgiTalivAak~~e~---v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e 177 (277)
T KOG2984|consen 108 MEA------LKLE-PFSVLGWSDGGITALIVAAKGKEK---VNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYE 177 (277)
T ss_pred HHH------hCCC-CeeEeeecCCCeEEEEeeccChhh---hhhheeecccceecchhHHHHhchHHHhhhhhhhcchHH
Confidence 544 4667 999999999999999999998887 77777776443221110 000 0000 00
Q ss_pred cccchHHHHHHHHHhCCCC---CCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhH-HHHHHHHHHHCCCCeEEE
Q 024286 161 YFVTVQDRDWYWRAYLPEG---ANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDW-QLAYMEGLKKAGQDVKLL 236 (269)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~-~~~~~~~l~~~~~~~~~~ 236 (269)
.......+...|....... ........+- -....+ .+|+||+||+.|++++. ...|...+ ....+++
T Consensus 178 ~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr--~~lp~v----kcPtli~hG~kDp~~~~~hv~fi~~~---~~~a~~~ 248 (277)
T KOG2984|consen 178 DHYGPETFRTQWAAWVDVVDQFHSFCDGRFCR--LVLPQV----KCPTLIMHGGKDPFCGDPHVCFIPVL---KSLAKVE 248 (277)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHhhcCCCchHh--hhcccc----cCCeeEeeCCcCCCCCCCCccchhhh---cccceEE
Confidence 0111122222222211100 0000111100 011222 34999999999999764 23333333 3346899
Q ss_pred EeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 237 YLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 237 ~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
+++.++|.|++- ..++....+.+||+++
T Consensus 249 ~~peGkHn~hLr----ya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 249 IHPEGKHNFHLR----YAKEFNKLVLDFLKST 276 (277)
T ss_pred EccCCCcceeee----chHHHHHHHHHHHhcc
Confidence 999999999764 4788999999999874
No 107
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.41 E-value=8.3e-12 Score=103.92 Aligned_cols=62 Identities=16% Similarity=0.121 Sum_probs=48.8
Q ss_pred CceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeCC-CceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 203 PKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQ-ATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~-~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.|+|+++|++|.+++. .+.+.+.+...+.+++++++++ .||... .++.+++.+.+.+||++.
T Consensus 324 ~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~----le~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 324 ANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAG----VFDIHLFEKKIYEFLNRK 388 (389)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchh----hcCHHHHHHHHHHHHccc
Confidence 4999999999998875 3555666665556789999986 899653 456889999999999864
No 108
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.39 E-value=2.4e-11 Score=113.25 Aligned_cols=63 Identities=14% Similarity=0.092 Sum_probs=45.7
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEE-EEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKL-LYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.|+|+++|++|.+++.... +.+.+.-...++ .+++++||..... .....++++..+.+||+++
T Consensus 298 ~P~L~i~G~~D~ivp~~~~--~~l~~~i~~a~~~~~~~~~GH~g~~~-g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 298 CPVLAFVGEVDDIGQPASV--RGIRRAAPNAEVYESLIRAGHFGLVV-GSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred CCEEEEEeCCCCCCCHHHH--HHHHHhCCCCeEEEEeCCCCCEeeee-chhhhhhhChHHHHHHHHh
Confidence 4999999999999886322 333333345565 6778999976554 3456788999999999864
No 109
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.39 E-value=2.7e-12 Score=107.59 Aligned_cols=226 Identities=16% Similarity=0.147 Sum_probs=145.7
Q ss_pred CCCCCccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC-----------C
Q 024286 12 EEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-----------Y 80 (269)
Q Consensus 12 ~~~~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-----------~ 80 (269)
++.+-..+-+.+-...++ .|++|+--||=-+.-.+. |......|.++ |...+..+.|+.++.. .
T Consensus 403 DGT~IPYFiv~K~~~~d~-~pTll~aYGGF~vsltP~---fs~~~~~WLer-Gg~~v~ANIRGGGEfGp~WH~Aa~k~nr 477 (648)
T COG1505 403 DGTRIPYFIVRKGAKKDE-NPTLLYAYGGFNISLTPR---FSGSRKLWLER-GGVFVLANIRGGGEFGPEWHQAGMKENK 477 (648)
T ss_pred CCccccEEEEecCCcCCC-CceEEEeccccccccCCc---cchhhHHHHhc-CCeEEEEecccCCccCHHHHHHHhhhcc
Confidence 333333444442222343 489888887633322222 44555778888 9999999999987652 2
Q ss_pred CCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCch----hhh
Q 024286 81 PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTES----EKR 156 (269)
Q Consensus 81 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~----~~~ 156 (269)
.+..+|-.++.+.+.++.. ..++ +++|.|.|-||.|......+.|+. +.++++-.|++|+.....- ...
T Consensus 478 q~vfdDf~AVaedLi~rgi---tspe-~lgi~GgSNGGLLvg~alTQrPel---fgA~v~evPllDMlRYh~l~aG~sW~ 550 (648)
T COG1505 478 QNVFDDFIAVAEDLIKRGI---TSPE-KLGIQGGSNGGLLVGAALTQRPEL---FGAAVCEVPLLDMLRYHLLTAGSSWI 550 (648)
T ss_pred hhhhHHHHHHHHHHHHhCC---CCHH-HhhhccCCCCceEEEeeeccChhh---hCceeeccchhhhhhhcccccchhhH
Confidence 3456899999999999877 7889 999999999999998888888776 9999999999986532100 000
Q ss_pred hcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccC-CCCCceeEEecCCCcChh--HHHHHHHHHHHCCCCe
Q 024286 157 LDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVG-VKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDV 233 (269)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~~~~~ 233 (269)
..-+......... ....| +|+ ++++. .++||+||..+.+|.-|. .+++|+.+|++.+.++
T Consensus 551 ~EYG~Pd~P~d~~-~l~~Y------------SPy----~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv 613 (648)
T COG1505 551 AEYGNPDDPEDRA-FLLAY------------SPY----HNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPV 613 (648)
T ss_pred hhcCCCCCHHHHH-HHHhc------------Cch----hcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCce
Confidence 0001111111111 11111 111 22222 238999999999996554 3799999999999998
Q ss_pred EEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 234 KLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 234 ~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
-+.+=-++||+-- .+..+..+....+..||.+.
T Consensus 614 ~~~e~t~gGH~g~--~~~~~~A~~~a~~~afl~r~ 646 (648)
T COG1505 614 LLREETKGGHGGA--APTAEIARELADLLAFLLRT 646 (648)
T ss_pred EEEeecCCcccCC--CChHHHHHHHHHHHHHHHHh
Confidence 8888888999641 12222234455567777664
No 110
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.38 E-value=1.2e-13 Score=110.22 Aligned_cols=122 Identities=16% Similarity=0.179 Sum_probs=82.9
Q ss_pred cccccccc-CCCCCcccEEEEEcCCccccCCCCchhhH-HHH------HHHhhcCCCEEEeeccCCCCCCC------CCC
Q 024286 17 NIAELEKP-VSSEVVVPVIIFFHGGSFAHSSANSAIYD-ILC------RRLVGTCKAVVVSVNYRRAPENR------YPC 82 (269)
Q Consensus 17 ~~~~~~~p-~~~~~~~p~vv~~HGgg~~~~~~~~~~~~-~~~------~~l~~~~g~~v~~~d~r~~~~~~------~~~ 82 (269)
+..+||+| ....++.|+||..|+.+- +........ ... ..++++ ||+|+..|.|+.+.+. .+.
T Consensus 5 L~adv~~P~~~~~~~~P~il~~tpY~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GY~vV~~D~RG~g~S~G~~~~~~~~ 81 (272)
T PF02129_consen 5 LAADVYRPGADGGGPFPVILTRTPYGK--GDQTASDLAGANPGPPSARRPFAER-GYAVVVQDVRGTGGSEGEFDPMSPN 81 (272)
T ss_dssp EEEEEEEE--TTSSSEEEEEEEESSTC--TC-HHHHHHTTCHHSHGGGHHHHHT-T-EEEEEE-TTSTTS-S-B-TTSHH
T ss_pred EEEEEEecCCCCCCcccEEEEccCcCC--CCCcccchhhhhcccchhHHHHHhC-CCEEEEECCcccccCCCccccCChh
Confidence 45688888 345566699999999442 110100000 001 127777 9999999999876542 334
Q ss_pred chhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCC
Q 024286 83 AYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE 149 (269)
Q Consensus 83 ~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~ 149 (269)
..+|..++|+|+.++.. ... +|+++|.|++|..++.+|...+.. +++++...+..+...
T Consensus 82 e~~D~~d~I~W~~~Qpw----s~G-~VGm~G~SY~G~~q~~~A~~~~p~---LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 82 EAQDGYDTIEWIAAQPW----SNG-KVGMYGISYGGFTQWAAAARRPPH---LKAIVPQSGWSDLYR 140 (272)
T ss_dssp HHHHHHHHHHHHHHCTT----EEE-EEEEEEETHHHHHHHHHHTTT-TT---EEEEEEESE-SBTCC
T ss_pred HHHHHHHHHHHHHhCCC----CCC-eEEeeccCHHHHHHHHHHhcCCCC---ceEEEecccCCcccc
Confidence 67899999999999843 445 899999999999999999855444 999999988877654
No 111
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.38 E-value=5.6e-13 Score=105.35 Aligned_cols=204 Identities=13% Similarity=0.063 Sum_probs=114.6
Q ss_pred ccccccccCC--CCCcccEEEEEcC-CccccCCCCchhhHHHHHHHhhcCC----CEEEeeccCCCCCC----C------
Q 024286 17 NIAELEKPVS--SEVVVPVIIFFHG-GSFAHSSANSAIYDILCRRLVGTCK----AVVVSVNYRRAPEN----R------ 79 (269)
Q Consensus 17 ~~~~~~~p~~--~~~~~p~vv~~HG-gg~~~~~~~~~~~~~~~~~l~~~~g----~~v~~~d~r~~~~~----~------ 79 (269)
-.+.||.|++ ..+++|+|+++|| ++|.... .....+..+..+ + ..+++++....... .
T Consensus 8 ~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~----~~~~~~~~~~~~-~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~ 82 (251)
T PF00756_consen 8 RRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNG----NAQEALDRLIAE-GKIPPMIIVVIPNGDNSRFYTSWYLPAGSS 82 (251)
T ss_dssp EEEEEEECTTGGTTTTEEEEEEESHTTHHHHHH----HHHHHHHHHHHH-HTSEEEEEEEEESSSTSSTTSBTTSSBCTT
T ss_pred EEEEEEECCCCCCCCCCEEEEEccCCccccccc----hHHHHHHHHHHh-CCCCceEEEEEecccccccccccccccccc
Confidence 3566777776 6788899999999 5543211 123344444444 3 44555554322200 0
Q ss_pred --CC--C---chhh--HHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCC
Q 024286 80 --YP--C---AYDD--GWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQER 150 (269)
Q Consensus 80 --~~--~---~~~d--~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~ 150 (269)
.. . ...+ ..+.+.+|.++.. +.++ +.+|+|+||||..|+.++.++++. +.+++++||.++....
T Consensus 83 ~~~~~~~~~~~~~~~l~~el~p~i~~~~~---~~~~-~~~i~G~S~GG~~Al~~~l~~Pd~---F~~~~~~S~~~~~~~~ 155 (251)
T PF00756_consen 83 RRADDSGGGDAYETFLTEELIPYIEANYR---TDPD-RRAIAGHSMGGYGALYLALRHPDL---FGAVIAFSGALDPSPS 155 (251)
T ss_dssp CBCTSTTTHHHHHHHHHTHHHHHHHHHSS---EEEC-CEEEEEETHHHHHHHHHHHHSTTT---ESEEEEESEESETTHC
T ss_pred cccccCCCCcccceehhccchhHHHHhcc---cccc-eeEEeccCCCcHHHHHHHHhCccc---cccccccCcccccccc
Confidence 00 0 1111 2456677776654 5666 599999999999999999999887 9999999998765411
Q ss_pred CchhhhhcCCcc-cchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcCh------------h
Q 024286 151 TESEKRLDGKYF-VTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQ------------D 217 (269)
Q Consensus 151 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~------------~ 217 (269)
......... ............. ......++++..|+.|... .
T Consensus 156 ---~w~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~ 210 (251)
T PF00756_consen 156 ---LWGPSDDEAWKENDPFDLIKALS----------------------QKKKPLRIYLDVGTKDEFGGWEDSAQILQFLA 210 (251)
T ss_dssp ---HHHHSTCGHHGGCHHHHHHHHHH----------------------HTTSEEEEEEEEETTSTTHHCSHHHHHHHHHH
T ss_pred ---ccCcCCcHHhhhccHHHHhhhhh----------------------cccCCCeEEEEeCCCCcccccccCHHHHHHHH
Confidence 100000000 0000000000000 0000127899999999732 1
Q ss_pred HHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHH
Q 024286 218 WQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNF 264 (269)
Q Consensus 218 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~f 264 (269)
..+.+.+.++..+.+..+++++| +|.+.. .++.+...+.|
T Consensus 211 ~~~~~~~~l~~~g~~~~~~~~~G-~H~~~~------W~~~l~~~L~~ 250 (251)
T PF00756_consen 211 NNRELAQLLKAKGIPHTYHVFPG-GHDWAY------WRRRLPDALPW 250 (251)
T ss_dssp HHHHHHHHCCCEECTTESEEEHS-ESSHHH------HHHHHHHHHHH
T ss_pred HhHhhHHHHHHcCCCceEEEecC-ccchhh------HHHHHHHHHhh
Confidence 23444445556677888999985 886542 34455555444
No 112
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=99.35 E-value=1.8e-12 Score=113.65 Aligned_cols=130 Identities=24% Similarity=0.269 Sum_probs=95.6
Q ss_pred CCCCCccccccccCCCCCc-ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCC---------CCCC
Q 024286 12 EEHRPNIAELEKPVSSEVV-VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE---------NRYP 81 (269)
Q Consensus 12 ~~~~~~~~~~~~p~~~~~~-~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~---------~~~~ 81 (269)
...++..++||.|...... +||+|++|||||..++............+..+ +..|+.+.||+..- .+-.
T Consensus 92 ~sEDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~-~VVvVt~~YRLG~lGF~st~d~~~~gN 170 (545)
T KOG1516|consen 92 GSEDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLK-DVVVVTINYRLGPLGFLSTGDSAAPGN 170 (545)
T ss_pred CcCCCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccC-CEEEEEecccceeceeeecCCCCCCCc
Confidence 3457889999999886542 79999999999998886432112222333334 79999999997521 1233
Q ss_pred CchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCc
Q 024286 82 CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 144 (269)
Q Consensus 82 ~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~ 144 (269)
-.+.|...+++|+++.....+.|++ +|.|+|||+||..+..+...... ...+..+|.+++.
T Consensus 171 ~gl~Dq~~AL~wv~~~I~~FGGdp~-~vTl~G~saGa~~v~~l~~Sp~s-~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 171 LGLFDQLLALRWVKDNIPSFGGDPK-NVTLFGHSAGAASVSLLTLSPHS-RGLFHKAISMSGN 231 (545)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCC-eEEEEeechhHHHHHHHhcCHhh-HHHHHHHHhhccc
Confidence 4578999999999999999999999 99999999999999877765322 2445666665544
No 113
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.35 E-value=5.2e-13 Score=107.39 Aligned_cols=119 Identities=18% Similarity=0.077 Sum_probs=71.9
Q ss_pred cccccccCCCCCcccEEEEEcCCccc----cCCCC---------chhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC--
Q 024286 18 IAELEKPVSSEVVVPVIIFFHGGSFA----HSSAN---------SAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC-- 82 (269)
Q Consensus 18 ~~~~~~p~~~~~~~p~vv~~HGgg~~----~~~~~---------~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-- 82 (269)
.+-+..|++.+++.|+||.+||-|.. .|... ......++..|+++ ||+|+++|-.+.++..-..
T Consensus 102 paylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~-GYVvla~D~~g~GER~~~e~~ 180 (390)
T PF12715_consen 102 PAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR-GYVVLAPDALGFGERGDMEGA 180 (390)
T ss_dssp EEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT-TSEEEEE--TTSGGG-SSCCC
T ss_pred EEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC-CCEEEEEcccccccccccccc
Confidence 45566788866667999999993211 11100 00013467889988 9999999988765421100
Q ss_pred ---------c----------------hhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccc
Q 024286 83 ---------A----------------YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILG 137 (269)
Q Consensus 83 ---------~----------------~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~ 137 (269)
. ..|...+++|+....+ +|++ ||+++|+||||+.++.+++.. + +|++
T Consensus 181 ~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpe---VD~~-RIG~~GfSmGg~~a~~LaALD-d---RIka 252 (390)
T PF12715_consen 181 AQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPE---VDPD-RIGCMGFSMGGYRAWWLAALD-D---RIKA 252 (390)
T ss_dssp TTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TT---EEEE-EEEEEEEGGGHHHHHHHHHH--T---T--E
T ss_pred ccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcc---cCcc-ceEEEeecccHHHHHHHHHcc-h---hhHh
Confidence 0 1366778999988887 9999 999999999999999998763 2 3777
Q ss_pred eeeeCCcc
Q 024286 138 NILLNPMF 145 (269)
Q Consensus 138 ~i~~~p~~ 145 (269)
.|..+=++
T Consensus 253 ~v~~~~l~ 260 (390)
T PF12715_consen 253 TVANGYLC 260 (390)
T ss_dssp EEEES-B-
T ss_pred Hhhhhhhh
Confidence 77665443
No 114
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.35 E-value=2.2e-10 Score=80.36 Aligned_cols=180 Identities=14% Similarity=0.153 Sum_probs=112.9
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCC---------CCCCCCchhhHHHHHHHHHhcccccC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP---------ENRYPCAYDDGWTVLKWAKSRSWLQS 102 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~ 102 (269)
-+||+-||.|- +-++..+...+..|+.. |+.|..+++.... .............++..+.+.
T Consensus 15 ~tilLaHGAGa---smdSt~m~~~a~~la~~-G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~----- 85 (213)
T COG3571 15 VTILLAHGAGA---SMDSTSMTAVAAALARR-GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG----- 85 (213)
T ss_pred EEEEEecCCCC---CCCCHHHHHHHHHHHhC-ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc-----
Confidence 48999999553 55666678889999988 9999999966321 111112234455566666665
Q ss_pred CCCCccEEEeecCchHHHHHHHHHHhhhccccccceeee-CCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCC
Q 024286 103 KDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILL-NPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGAN 181 (269)
Q Consensus 103 ~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (269)
.... +++|.|+||||-+|.+++..... .+++++++ +|+-.... ..
T Consensus 86 l~~g-pLi~GGkSmGGR~aSmvade~~A---~i~~L~clgYPfhppGK-Pe----------------------------- 131 (213)
T COG3571 86 LAEG-PLIIGGKSMGGRVASMVADELQA---PIDGLVCLGYPFHPPGK-PE----------------------------- 131 (213)
T ss_pred ccCC-ceeeccccccchHHHHHHHhhcC---CcceEEEecCccCCCCC-cc-----------------------------
Confidence 4555 89999999999999999875543 38888877 46542211 00
Q ss_pred CCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeC------CCCchHH
Q 024286 182 RDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFL------PNNGHFY 255 (269)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~------~~~~~~~ 255 (269)
..... ....+ ..|+||.||+.|++-...+. +... ...+++++.++++.|.+--- ....+.+
T Consensus 132 --~~Rt~----HL~gl----~tPtli~qGtrD~fGtr~~V-a~y~--ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~ 198 (213)
T COG3571 132 --QLRTE----HLTGL----KTPTLITQGTRDEFGTRDEV-AGYA--LSDPIEVVWLEDADHDLKPRKLVSGLSTADHLK 198 (213)
T ss_pred --cchhh----hccCC----CCCeEEeecccccccCHHHH-Hhhh--cCCceEEEEeccCccccccccccccccHHHHHH
Confidence 00000 00111 23999999999998654222 2222 24578999999999985321 1112344
Q ss_pred HHHHHHHHHhhc
Q 024286 256 TVMDEISNFVSC 267 (269)
Q Consensus 256 ~~~~~i~~fl~~ 267 (269)
...+.+..|+..
T Consensus 199 ~~A~~va~~~~~ 210 (213)
T COG3571 199 TLAEQVAGWARR 210 (213)
T ss_pred HHHHHHHHHHhh
Confidence 566667777653
No 115
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.34 E-value=1.4e-10 Score=87.69 Aligned_cols=207 Identities=14% Similarity=0.042 Sum_probs=117.6
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 111 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l 111 (269)
.++.|=|-|| +.. .|..+..+|.. .+.++.+.|++.+..--.....|+....+-+.+.... -.... +.++
T Consensus 9 ~L~cfP~AGG----sa~--~fr~W~~~lp~--~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~-~~~d~-P~al 78 (244)
T COG3208 9 RLFCFPHAGG----SAS--LFRSWSRRLPA--DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP-PLLDA-PFAL 78 (244)
T ss_pred eEEEecCCCC----CHH--HHHHHHhhCCc--hhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc-ccCCC-Ceee
Confidence 3555555555 333 26777766654 4899999999877665566677777777777766432 12234 7999
Q ss_pred eecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchh------------hhhcCCc---ccchHHHHHHH----
Q 024286 112 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESE------------KRLDGKY---FVTVQDRDWYW---- 172 (269)
Q Consensus 112 ~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~------------~~~~~~~---~~~~~~~~~~~---- 172 (269)
.||||||.+|..+|.+....+..+.++.+++.-.......... ......+ +.+.+.+....
T Consensus 79 fGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilR 158 (244)
T COG3208 79 FGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILR 158 (244)
T ss_pred cccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHH
Confidence 9999999999999999887766677666664222111110000 0001111 11111111110
Q ss_pred HHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCc
Q 024286 173 RAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNG 252 (269)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~ 252 (269)
..+.-..... .... ..+ .+|+.++.|++|..+... ....-.+..+...++++++| +|.|.+ +
T Consensus 159 AD~~~~e~Y~-~~~~-------~pl----~~pi~~~~G~~D~~vs~~-~~~~W~~~t~~~f~l~~fdG-gHFfl~----~ 220 (244)
T COG3208 159 ADFRALESYR-YPPP-------APL----ACPIHAFGGEKDHEVSRD-ELGAWREHTKGDFTLRVFDG-GHFFLN----Q 220 (244)
T ss_pred HHHHHhcccc-cCCC-------CCc----CcceEEeccCcchhccHH-HHHHHHHhhcCCceEEEecC-cceehh----h
Confidence 0010000000 0000 111 249999999999988653 22223334455789999998 896642 2
Q ss_pred hHHHHHHHHHHHhh
Q 024286 253 HFYTVMDEISNFVS 266 (269)
Q Consensus 253 ~~~~~~~~i~~fl~ 266 (269)
..+++...+.+.+.
T Consensus 221 ~~~~v~~~i~~~l~ 234 (244)
T COG3208 221 QREEVLARLEQHLA 234 (244)
T ss_pred hHHHHHHHHHHHhh
Confidence 45667777766664
No 116
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.33 E-value=7.8e-11 Score=94.45 Aligned_cols=208 Identities=14% Similarity=0.045 Sum_probs=112.6
Q ss_pred HHHHHHHhhcCCCEEEeeccCCCCCCCCCCchh---hHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhh
Q 024286 53 DILCRRLVGTCKAVVVSVNYRRAPENRYPCAYD---DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAV 129 (269)
Q Consensus 53 ~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~---d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~ 129 (269)
..++..+..+ ||+|+++||-+.+. +|..... .+.++++-+.+.....++..+.+++++|+|.||.-++..+...+
T Consensus 16 ~~~l~~~L~~-GyaVv~pDY~Glg~-~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~ 93 (290)
T PF03583_consen 16 APFLAAWLAR-GYAVVAPDYEGLGT-PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAP 93 (290)
T ss_pred HHHHHHHHHC-CCEEEecCCCCCCC-cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhH
Confidence 4566777777 99999999987655 5544333 33444444444433333433338999999999999887665433
Q ss_pred hcc--cc--ccceeeeCCccCCCCCCchhhh-------------hcCCcc---------cchH---HHHH--------HH
Q 024286 130 ESE--VE--ILGNILLNPMFGGQERTESEKR-------------LDGKYF---------VTVQ---DRDW--------YW 172 (269)
Q Consensus 130 ~~~--~~--~~~~i~~~p~~~~~~~~~~~~~-------------~~~~~~---------~~~~---~~~~--------~~ 172 (269)
+.. .. +.|.++..|..+.......... ....+. .... .+.. ..
T Consensus 94 ~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~~~ 173 (290)
T PF03583_consen 94 SYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLADIV 173 (290)
T ss_pred HhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHHHH
Confidence 322 34 7888888877653321100000 000000 0000 0000 00
Q ss_pred HHhCCCCC----CCCC-CCCCCCC-----CCC--CCc---cCCC-CCceeEEecCCCcChhH--HHHHHHHHHHCC-CCe
Q 024286 173 RAYLPEGA----NRDH-PACNPFG-----PKG--IDL---VGVK-FPKSLVVVAGLDLIQDW--QLAYMEGLKKAG-QDV 233 (269)
Q Consensus 173 ~~~~~~~~----~~~~-~~~~~~~-----~~~--~~~---~~~~-~~P~li~~G~~D~~~~~--~~~~~~~l~~~~-~~~ 233 (269)
..+..... .... .....+. ... ..+ .... ..|++|.||..|.++|. +.++.+++.+.| .++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V 253 (290)
T PF03583_consen 174 AEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADV 253 (290)
T ss_pred HHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCE
Confidence 00000000 0000 0000000 000 111 0111 23999999999999875 578888888899 899
Q ss_pred EEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcCC
Q 024286 234 KLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 234 ~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~~ 269 (269)
+++.+++.+|... ........++||.++|
T Consensus 254 ~~~~~~~~~H~~~-------~~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 254 EYVRYPGGGHLGA-------AFASAPDALAWLDDRF 282 (290)
T ss_pred EEEecCCCChhhh-------hhcCcHHHHHHHHHHH
Confidence 9999999999642 2234456778887654
No 117
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.32 E-value=2.2e-11 Score=101.58 Aligned_cols=107 Identities=17% Similarity=0.184 Sum_probs=73.5
Q ss_pred CcccEEEEEcCCccccCCCCchhhH-HHHHHHhhcC-CCEEEeeccCCCCCCCCCCch-------hhHHHHHHHHHhccc
Q 024286 29 VVVPVIIFFHGGSFAHSSANSAIYD-ILCRRLVGTC-KAVVVSVNYRRAPENRYPCAY-------DDGWTVLKWAKSRSW 99 (269)
Q Consensus 29 ~~~p~vv~~HGgg~~~~~~~~~~~~-~~~~~l~~~~-g~~v~~~d~r~~~~~~~~~~~-------~d~~~~~~~~~~~~~ 99 (269)
...|++|++|| |.. +.....|. .+++.|.... .+.|+++|+++++...++... .++.+.++++.+...
T Consensus 39 ~~~ptvIlIHG--~~~-s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~g 115 (442)
T TIGR03230 39 HETKTFIVIHG--WTV-TGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFN 115 (442)
T ss_pred CCCCeEEEECC--CCc-CCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhC
Confidence 34599999999 332 22222233 3555555321 699999999988776555321 345666666654432
Q ss_pred ccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 100 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 100 ~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
.+.+ ++.|+||||||.+|..++.+.+.+ +.+++++.|.-
T Consensus 116 ---l~l~-~VhLIGHSLGAhIAg~ag~~~p~r---V~rItgLDPAg 154 (442)
T TIGR03230 116 ---YPWD-NVHLLGYSLGAHVAGIAGSLTKHK---VNRITGLDPAG 154 (442)
T ss_pred ---CCCC-cEEEEEECHHHHHHHHHHHhCCcc---eeEEEEEcCCC
Confidence 5677 999999999999999998876544 89999998863
No 118
>COG0627 Predicted esterase [General function prediction only]
Probab=99.31 E-value=1.8e-11 Score=98.14 Aligned_cols=227 Identities=14% Similarity=0.104 Sum_probs=126.5
Q ss_pred ccccccCCC-----CCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccC-------------CCCCCCC
Q 024286 19 AELEKPVSS-----EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR-------------RAPENRY 80 (269)
Q Consensus 19 ~~~~~p~~~-----~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r-------------~~~~~~~ 80 (269)
+.+++|... ..+.|+++++||-. ++.....-..-+++.+...|..++++|-. ..+...+
T Consensus 37 ~~v~~~~~p~s~~m~~~ipV~~~l~G~t---~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sf 113 (316)
T COG0627 37 FPVELPPVPASPSMGRDIPVLYLLSGLT---CNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASF 113 (316)
T ss_pred cccccCCcccccccCCCCCEEEEeCCCC---CCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccce
Confidence 666776654 36779999999922 22211111222456666669999998533 0111111
Q ss_pred C------------CchhhH--HHHHHHHHhcccccCCCC--CccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCc
Q 024286 81 P------------CAYDDG--WTVLKWAKSRSWLQSKDS--KAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 144 (269)
Q Consensus 81 ~------------~~~~d~--~~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~ 144 (269)
+ ...++. .+.-..+.+... .+. + +.+|+||||||+-|+.+|+++++. ++.+..++|+
T Consensus 114 Y~d~~~~~~~~~~~q~~tfl~~ELP~~~~~~f~---~~~~~~-~~aI~G~SMGG~GAl~lA~~~pd~---f~~~sS~Sg~ 186 (316)
T COG0627 114 YSDWTQPPWASGPYQWETFLTQELPALWEAAFP---ADGTGD-GRAIAGHSMGGYGALKLALKHPDR---FKSASSFSGI 186 (316)
T ss_pred ecccccCccccCccchhHHHHhhhhHHHHHhcC---cccccC-CceeEEEeccchhhhhhhhhCcch---hceecccccc
Confidence 1 111111 111111211111 122 3 789999999999999999998766 9999999999
Q ss_pred cCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCC---C-------ccCCCCCceeEEecCCCc
Q 024286 145 FGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGI---D-------LVGVKFPKSLVVVAGLDL 214 (269)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~P~li~~G~~D~ 214 (269)
++........ ........ ......+.+...........+.....+ . ... ..+++++-+|..|.
T Consensus 187 ~~~s~~~~~~--~~~~~~~g----~~~~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~-~~~~~~~d~g~ad~ 259 (316)
T COG0627 187 LSPSSPWGPT--LAMGDPWG----GKAFNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGG-SPPELLIDNGPADF 259 (316)
T ss_pred cccccccccc--cccccccc----CccHHHhcCCCccccccccCchhHHHHhhhcccccceeccc-CCCccccccccchh
Confidence 9876322211 00000000 001111111111111111111100000 0 000 23588999999998
Q ss_pred Chh-H---HHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 215 IQD-W---QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 215 ~~~-~---~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
+.. . .+.+.+++.+.+.+..+...++..|.+.. ....+.....|+.+.
T Consensus 260 ~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~------w~~~l~~~~~~~a~~ 311 (316)
T COG0627 260 FLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYF------WASQLADHLPWLAGA 311 (316)
T ss_pred hhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHH------HHHHHHHHHHHHHHH
Confidence 765 3 58899999999988889988899998764 467778888887654
No 119
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.29 E-value=3.4e-10 Score=87.66 Aligned_cols=118 Identities=17% Similarity=0.172 Sum_probs=78.7
Q ss_pred cccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeec-cCCCC------CC----CCCCchhh
Q 024286 18 IAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN-YRRAP------EN----RYPCAYDD 86 (269)
Q Consensus 18 ~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d-~r~~~------~~----~~~~~~~d 86 (269)
...+|.|...+.+.|+||++||++- +........=+..++++.|+.|+.|| |...- .. +.....+|
T Consensus 48 ~y~l~vP~g~~~~apLvv~LHG~~~---sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~dd 124 (312)
T COG3509 48 SYRLYVPPGLPSGAPLVVVLHGSGG---SGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDD 124 (312)
T ss_pred ceEEEcCCCCCCCCCEEEEEecCCC---ChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccH
Confidence 4677788774444499999999552 22211112224688888899999996 33221 11 11233444
Q ss_pred ---HHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 87 ---GWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 87 ---~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
+.+++..+..+ .++|+. ||+|.|.|.||.++..++..+++. +.++...++..
T Consensus 125 Vgflr~lva~l~~~---~gidp~-RVyvtGlS~GG~Ma~~lac~~p~~---faa~A~VAg~~ 179 (312)
T COG3509 125 VGFLRALVAKLVNE---YGIDPA-RVYVTGLSNGGRMANRLACEYPDI---FAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHHh---cCcCcc-eEEEEeeCcHHHHHHHHHhcCccc---ccceeeeeccc
Confidence 45555555444 459999 999999999999999999987776 77777776655
No 120
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.28 E-value=3.7e-10 Score=96.12 Aligned_cols=212 Identities=17% Similarity=0.131 Sum_probs=133.8
Q ss_pred eeecCCCCCCCCCccccccccC-CCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC---
Q 024286 4 RIYRPTNGEEHRPNIAELEKPV-SSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR--- 79 (269)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~p~-~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~--- 79 (269)
|||.++++...-|..+ +|+-. ..++..|++++--| ..|......|....-.|..+ |+.....--|++++-.
T Consensus 421 riwa~a~dgv~VPVSL-vyrkd~~~~g~~p~lLygYG---aYG~s~~p~Fs~~~lSLlDR-GfiyAIAHVRGGgelG~~W 495 (682)
T COG1770 421 RIWATADDGVQVPVSL-VYRKDTKLDGSAPLLLYGYG---AYGISMDPSFSIARLSLLDR-GFVYAIAHVRGGGELGRAW 495 (682)
T ss_pred EEEEEcCCCcEeeEEE-EEecccCCCCCCcEEEEEec---cccccCCcCcccceeeeecC-ceEEEEEEeecccccChHH
Confidence 6777765544333222 22222 23444489999988 23333333355444556667 9888777888876532
Q ss_pred --------CCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCC
Q 024286 80 --------YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT 151 (269)
Q Consensus 80 --------~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~ 151 (269)
-.+...|-.++.++|.+... .+.+ +|+++|.|+||++...++-..++. ++++|+..|+++.-...
T Consensus 496 Ye~GK~l~K~NTf~DFIa~a~~Lv~~g~---~~~~-~i~a~GGSAGGmLmGav~N~~P~l---f~~iiA~VPFVDvltTM 568 (682)
T COG1770 496 YEDGKLLNKKNTFTDFIAAARHLVKEGY---TSPD-RIVAIGGSAGGMLMGAVANMAPDL---FAGIIAQVPFVDVLTTM 568 (682)
T ss_pred HHhhhhhhccccHHHHHHHHHHHHHcCc---CCcc-ceEEeccCchhHHHHHHHhhChhh---hhheeecCCccchhhhh
Confidence 23456789999999999887 7888 999999999999999999877776 99999999998753221
Q ss_pred ch--------hhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChh--HHHH
Q 024286 152 ES--------EKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLA 221 (269)
Q Consensus 152 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~ 221 (269)
.. +... -+.+. ......++..|.| + ++++....|++|+..|-+|+-|+ +..+
T Consensus 569 lD~slPLT~~E~~E-WGNP~-d~e~y~yikSYSP------------Y----dNV~a~~YP~ilv~~Gl~D~rV~YwEpAK 630 (682)
T COG1770 569 LDPSLPLTVTEWDE-WGNPL-DPEYYDYIKSYSP------------Y----DNVEAQPYPAILVTTGLNDPRVQYWEPAK 630 (682)
T ss_pred cCCCCCCCccchhh-hCCcC-CHHHHHHHhhcCc------------h----hccccCCCCceEEEccccCCccccchHHH
Confidence 10 0000 01111 1222233443322 1 22222237899999999998765 3467
Q ss_pred HHHHHHHCCC---CeEEEEeCCCceee
Q 024286 222 YMEGLKKAGQ---DVKLLYLEQATIGF 245 (269)
Q Consensus 222 ~~~~l~~~~~---~~~~~~~~~~~H~~ 245 (269)
+.++|++.+. ++-+..-..+||+-
T Consensus 631 WvAkLR~~~td~~plLlkt~M~aGHgG 657 (682)
T COG1770 631 WVAKLRELKTDGNPLLLKTNMDAGHGG 657 (682)
T ss_pred HHHHHhhcccCCCcEEEEecccccCCC
Confidence 7788877653 45556556789963
No 121
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.28 E-value=2.5e-10 Score=97.20 Aligned_cols=115 Identities=10% Similarity=0.086 Sum_probs=75.0
Q ss_pred cccCCCCCcccEEEEEcCCccc----cCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC----CCCCchhhHHHHHHH
Q 024286 22 EKPVSSEVVVPVIIFFHGGSFA----HSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN----RYPCAYDDGWTVLKW 93 (269)
Q Consensus 22 ~~p~~~~~~~p~vv~~HGgg~~----~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~----~~~~~~~d~~~~~~~ 93 (269)
|.|.........||+++. |+ +-.-.. -..+++.|.+. |+.|+++|.+..... ++.+.++.+.++++.
T Consensus 206 Y~P~te~v~~~PLLIVPp--~INK~YIlDL~P--~~SlVr~lv~q-G~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald~ 280 (560)
T TIGR01839 206 YKPITEQQHARPLLVVPP--QINKFYIFDLSP--EKSFVQYCLKN-QLQVFIISWRNPDKAHREWGLSTYVDALKEAVDA 280 (560)
T ss_pred eCCCCCCcCCCcEEEech--hhhhhheeecCC--cchHHHHHHHc-CCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHHH
Confidence 334443333366777777 22 111111 25678888888 999999999974433 223344566777777
Q ss_pred HHhcccccCCCCCccEEEeecCchHHHHHH----HHHHhhhccccccceeeeCCccCCCC
Q 024286 94 AKSRSWLQSKDSKAHIYLAGDSSGGNIVHH----VALRAVESEVEILGNILLNPMFGGQE 149 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~----~a~~~~~~~~~~~~~i~~~p~~~~~~ 149 (269)
+.+. .+.+ ++.++|+||||.+++. ++++.++ .+|+.++++...+|...
T Consensus 281 V~~~-----tG~~-~vnl~GyC~GGtl~a~~~a~~aA~~~~--~~V~sltllatplDf~~ 332 (560)
T TIGR01839 281 VRAI-----TGSR-DLNLLGACAGGLTCAALVGHLQALGQL--RKVNSLTYLVSLLDSTM 332 (560)
T ss_pred HHHh-----cCCC-CeeEEEECcchHHHHHHHHHHHhcCCC--CceeeEEeeecccccCC
Confidence 7766 4556 8999999999999996 3333321 25999998888777653
No 122
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.26 E-value=3.2e-10 Score=83.52 Aligned_cols=150 Identities=18% Similarity=0.116 Sum_probs=83.4
Q ss_pred EEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEEee
Q 024286 34 IIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAG 113 (269)
Q Consensus 34 vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G 113 (269)
|+++|| ..++...+++..+.+.+... +.|-.++.. ..+..+-++.+.+... ...+ +++|+|
T Consensus 1 v~IvhG---~~~s~~~HW~~wl~~~l~~~--~~V~~~~~~----------~P~~~~W~~~l~~~i~---~~~~-~~ilVa 61 (171)
T PF06821_consen 1 VLIVHG---YGGSPPDHWQPWLERQLENS--VRVEQPDWD----------NPDLDEWVQALDQAID---AIDE-PTILVA 61 (171)
T ss_dssp EEEE-----TTSSTTTSTHHHHHHHHTTS--EEEEEC--T----------S--HHHHHHHHHHCCH---C-TT-TEEEEE
T ss_pred CEEeCC---CCCCCccHHHHHHHHhCCCC--eEEeccccC----------CCCHHHHHHHHHHHHh---hcCC-CeEEEE
Confidence 689999 33466666566666666553 677766641 1234444444554433 2334 799999
Q ss_pred cCchHHHHHHHHHHhhhccccccceeeeCCccCC-CCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCC
Q 024286 114 DSSGGNIVHHVALRAVESEVEILGNILLNPMFGG-QERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGP 192 (269)
Q Consensus 114 ~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (269)
||+|+..++.++. .....+++|+++.+|+-.. ........ . .+.. .+
T Consensus 62 HSLGc~~~l~~l~--~~~~~~v~g~lLVAp~~~~~~~~~~~~~--~--------------------~f~~-~p------- 109 (171)
T PF06821_consen 62 HSLGCLTALRWLA--EQSQKKVAGALLVAPFDPDDPEPFPPEL--D--------------------GFTP-LP------- 109 (171)
T ss_dssp ETHHHHHHHHHHH--HTCCSSEEEEEEES--SCGCHHCCTCGG--C--------------------CCTT-SH-------
T ss_pred eCHHHHHHHHHHh--hcccccccEEEEEcCCCcccccchhhhc--c--------------------cccc-Cc-------
Confidence 9999999999995 2334579999999998532 00000000 0 0000 00
Q ss_pred CCCCccCCCCCceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeCCCcee
Q 024286 193 KGIDLVGVKFPKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIG 244 (269)
Q Consensus 193 ~~~~~~~~~~~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~ 244 (269)
..... .|.+++.+++|+.++. ++.+++++ +.+++.++++||-
T Consensus 110 -~~~l~----~~~~viaS~nDp~vp~~~a~~~A~~l-----~a~~~~~~~~GHf 153 (171)
T PF06821_consen 110 -RDPLP----FPSIVIASDNDPYVPFERAQRLAQRL-----GAELIILGGGGHF 153 (171)
T ss_dssp -CCHHH----CCEEEEEETTBSSS-HHHHHHHHHHH-----T-EEEEETS-TTS
T ss_pred -ccccC----CCeEEEEcCCCCccCHHHHHHHHHHc-----CCCeEECCCCCCc
Confidence 00011 1779999999999886 34444444 3589999999994
No 123
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.24 E-value=9.3e-11 Score=97.20 Aligned_cols=107 Identities=26% Similarity=0.276 Sum_probs=62.7
Q ss_pred CcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC-------------C-------------CCC
Q 024286 29 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-------------R-------------YPC 82 (269)
Q Consensus 29 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-------------~-------------~~~ 82 (269)
.+.|+|||-||- .|+... +..++..||++ ||.|+++|+|-.... . +..
T Consensus 98 ~~~PvvIFSHGl---gg~R~~--yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T PF03403_consen 98 GKFPVVIFSHGL---GGSRTS--YSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRD 171 (379)
T ss_dssp S-EEEEEEE--T---T--TTT--THHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE---
T ss_pred CCCCEEEEeCCC---Ccchhh--HHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccc
Confidence 678999999993 334444 78999999999 999999999843100 0 000
Q ss_pred c----------------hhhHHHHHHHHHhccc---------------cc-C-CCCCccEEEeecCchHHHHHHHHHHhh
Q 024286 83 A----------------YDDGWTVLKWAKSRSW---------------LQ-S-KDSKAHIYLAGDSSGGNIVHHVALRAV 129 (269)
Q Consensus 83 ~----------------~~d~~~~~~~~~~~~~---------------~~-~-~~~~~~i~l~G~S~Gg~la~~~a~~~~ 129 (269)
. ..|+..+++.+.+... .+ + +|.+ +|+++|||+||+.|+..+.+.
T Consensus 172 ~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~-~i~~~GHSFGGATa~~~l~~d- 249 (379)
T PF03403_consen 172 FDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLS-RIGLAGHSFGGATALQALRQD- 249 (379)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEE-EEEEEEETHHHHHHHHHHHH--
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchh-heeeeecCchHHHHHHHHhhc-
Confidence 0 1345556666653110 01 2 5678 999999999999999888763
Q ss_pred hccccccceeeeCCccC
Q 024286 130 ESEVEILGNILLNPMFG 146 (269)
Q Consensus 130 ~~~~~~~~~i~~~p~~~ 146 (269)
.+++++|++-||+.
T Consensus 250 ---~r~~~~I~LD~W~~ 263 (379)
T PF03403_consen 250 ---TRFKAGILLDPWMF 263 (379)
T ss_dssp ---TT--EEEEES---T
T ss_pred ---cCcceEEEeCCccc
Confidence 45999999999874
No 124
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.22 E-value=1.1e-11 Score=96.31 Aligned_cols=71 Identities=24% Similarity=0.211 Sum_probs=59.0
Q ss_pred CEEEeeccCCCCCCCC---C----CchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccc
Q 024286 65 AVVVSVNYRRAPENRY---P----CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILG 137 (269)
Q Consensus 65 ~~v~~~d~r~~~~~~~---~----~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~ 137 (269)
|.|+++|.|+.+.++- . ....|..+.+..+.+. .+.+ ++.++||||||.+++.+|.++++. +++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~~-~~~~vG~S~Gg~~~~~~a~~~p~~---v~~ 71 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREA-----LGIK-KINLVGHSMGGMLALEYAAQYPER---VKK 71 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHH-----HTTS-SEEEEEETHHHHHHHHHHHHSGGG---EEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHH-----hCCC-CeEEEEECCChHHHHHHHHHCchh---hcC
Confidence 6899999999887762 1 1346788888888876 4566 899999999999999999999886 999
Q ss_pred eeeeCCc
Q 024286 138 NILLNPM 144 (269)
Q Consensus 138 ~i~~~p~ 144 (269)
+++.++.
T Consensus 72 lvl~~~~ 78 (230)
T PF00561_consen 72 LVLISPP 78 (230)
T ss_dssp EEEESES
T ss_pred cEEEeee
Confidence 9999985
No 125
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.20 E-value=2.1e-10 Score=91.91 Aligned_cols=117 Identities=18% Similarity=0.161 Sum_probs=85.5
Q ss_pred ceeecCCCCCCCCCccccccccCCCCC-----cccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCC
Q 024286 3 PRIYRPTNGEEHRPNIAELEKPVSSEV-----VVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE 77 (269)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~ 77 (269)
+.++.++... .++..++++.|..... +.|+|++-||.|- +... |...++.+++. ||.|..+++.++..
T Consensus 39 ~~i~~~~~~r-~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs---~~~~--f~~~A~~lAs~-Gf~Va~~~hpgs~~ 111 (365)
T COG4188 39 VTITLNDPQR-DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGS---YVTG--FAWLAEHLASY-GFVVAAPDHPGSNA 111 (365)
T ss_pred EEEeccCccc-CCccccceeccCCCccccccCcCCeEEecCCCCC---Cccc--hhhhHHHHhhC-ceEEEeccCCCccc
Confidence 4455565333 3567889999988554 7799999999542 3333 78889999988 99999999886421
Q ss_pred C----------CC-----CCchhhHHHHHHHHHhc---ccccC-CCCCccEEEeecCchHHHHHHHHHH
Q 024286 78 N----------RY-----PCAYDDGWTVLKWAKSR---SWLQS-KDSKAHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 78 ~----------~~-----~~~~~d~~~~~~~~~~~---~~~~~-~~~~~~i~l~G~S~Gg~la~~~a~~ 127 (269)
. .+ .+-..|+...++++.+. ....+ +|.. +|++.|||.||+.++.++.-
T Consensus 112 ~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~-~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 112 GGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQ-RVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred ccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCcc-ceEEEecccccHHHHHhccc
Confidence 1 01 13356888888888887 32223 8888 99999999999999988754
No 126
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.16 E-value=1.1e-08 Score=80.39 Aligned_cols=100 Identities=19% Similarity=0.226 Sum_probs=64.2
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcC-CCEEEeeccCCCCCCC--CCCchhhHHHHHHHHHhcccccCCCCCcc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTC-KAVVVSVNYRRAPENR--YPCAYDDGWTVLKWAKSRSWLQSKDSKAH 108 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~-g~~v~~~d~r~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 108 (269)
|.|+++||++. +... |......+.... .|.|+.+|.|+++.+. .... ....+.+..+.+. .... +
T Consensus 22 ~~i~~~hg~~~---~~~~--~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~-~~~~~~~~~~~~~-----~~~~-~ 89 (282)
T COG0596 22 PPLVLLHGFPG---SSSV--WRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSL-SAYADDLAALLDA-----LGLE-K 89 (282)
T ss_pred CeEEEeCCCCC---chhh--hHHHHHHhhccccceEEEEecccCCCCCCcccccH-HHHHHHHHHHHHH-----hCCC-c
Confidence 69999999543 2222 333222333321 2899999999887775 1111 1112222333332 3445 7
Q ss_pred EEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 109 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
+.++|||+||.+++.++.+.++. ++++++.++...
T Consensus 90 ~~l~G~S~Gg~~~~~~~~~~p~~---~~~~v~~~~~~~ 124 (282)
T COG0596 90 VVLVGHSMGGAVALALALRHPDR---VRGLVLIGPAPP 124 (282)
T ss_pred eEEEEecccHHHHHHHHHhcchh---hheeeEecCCCC
Confidence 99999999999999999988775 899999886643
No 127
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.16 E-value=7.5e-10 Score=86.06 Aligned_cols=188 Identities=15% Similarity=0.175 Sum_probs=113.5
Q ss_pred CCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCC------------CC----------CC-
Q 024286 25 VSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE------------NR----------YP- 81 (269)
Q Consensus 25 ~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~------------~~----------~~- 81 (269)
++++.|+|+|||-|| ..|+... |..++-.||++ ||.|.++++|-... .+ ++
T Consensus 112 ~tk~~k~PvvvFSHG---LggsRt~--YSa~c~~LASh-G~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~ 185 (399)
T KOG3847|consen 112 STKNDKYPVVVFSHG---LGGSRTL--YSAYCTSLASH-GFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEA 185 (399)
T ss_pred CCCCCCccEEEEecc---cccchhh--HHHHhhhHhhC-ceEEEEeecccCcceeEEEecccccCCcccccceEeeeecc
Confidence 345678999999999 3334443 88899999999 99999999983210 00 00
Q ss_pred ---------C----chhhHHHHHHHHHhcccc------------------cCCCCCccEEEeecCchHHHHHHHHHHhhh
Q 024286 82 ---------C----AYDDGWTVLKWAKSRSWL------------------QSKDSKAHIYLAGDSSGGNIVHHVALRAVE 130 (269)
Q Consensus 82 ---------~----~~~d~~~~~~~~~~~~~~------------------~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~ 130 (269)
+ -..++..+++.+.+.... -.++.. ++.++|||.||+.++.....
T Consensus 186 ~ekef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s-~~aViGHSFGgAT~i~~ss~--- 261 (399)
T KOG3847|consen 186 NEKEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTS-QAAVIGHSFGGATSIASSSS--- 261 (399)
T ss_pred CceeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhh-hhhheeccccchhhhhhhcc---
Confidence 0 023555666555432110 015677 89999999999987766543
Q ss_pred ccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEec
Q 024286 131 SEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVA 210 (269)
Q Consensus 131 ~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G 210 (269)
...+++.|++-.|.-.-+..-. + .. ..|+|++.-
T Consensus 262 -~t~FrcaI~lD~WM~Pl~~~~~-------------------------------~----------~a----rqP~~finv 295 (399)
T KOG3847|consen 262 -HTDFRCAIALDAWMFPLDQLQY-------------------------------S----------QA----RQPTLFINV 295 (399)
T ss_pred -ccceeeeeeeeeeecccchhhh-------------------------------h----------hc----cCCeEEEEc
Confidence 3459999999887632211000 0 00 128888874
Q ss_pred CCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeee----eC---------------CCCchHHHHHHHHHHHhhcCC
Q 024286 211 GLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFY----FL---------------PNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 211 ~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~----~~---------------~~~~~~~~~~~~i~~fl~~~~ 269 (269)
+ |--.+++....+++-..+..-..+++.|+=|.-. .. ...+..+-..+..+.||++|+
T Consensus 296 ~-~fQ~~en~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dpy~~~~~~~r~slaFLq~h~ 372 (399)
T KOG3847|consen 296 E-DFQWNENLLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDPYEAMQIAIRASLAFLQKHL 372 (399)
T ss_pred c-cccchhHHHHHHhhhCCCccceEEEEccceecccccCccccHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHhhh
Confidence 3 4444555454555555554557788888877511 10 012334455566788888763
No 128
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=99.16 E-value=3e-10 Score=88.50 Aligned_cols=191 Identities=15% Similarity=0.039 Sum_probs=116.1
Q ss_pred cccccccCC--CCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhc---CCCEEEeeccCCCC----CC-CCCCchhhH
Q 024286 18 IAELEKPVS--SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGT---CKAVVVSVNYRRAP----EN-RYPCAYDDG 87 (269)
Q Consensus 18 ~~~~~~p~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~---~g~~v~~~d~r~~~----~~-~~~~~~~d~ 87 (269)
.+-+|.|.+ ...++|+++++||=-|+.... .......|..+ ....++.+||--.. +. .-....+.+
T Consensus 83 ~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~----i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L 158 (299)
T COG2382 83 RRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGR----IPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFL 158 (299)
T ss_pred eEEEEeCCCCCccccccEEEEeccHHHHhcCC----hHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHH
Confidence 456677776 567889999999955432221 23344444443 13568888865311 01 111122332
Q ss_pred -HHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchH
Q 024286 88 -WTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQ 166 (269)
Q Consensus 88 -~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (269)
.+.+-++.++.... -+.+ +-+|+|.|+||.+|+..++.+++. |..++..||.++.............
T Consensus 159 ~~eLlP~v~~~yp~~-~~a~-~r~L~G~SlGG~vsL~agl~~Pe~---FG~V~s~Sps~~~~~~~~~~~~~~~------- 226 (299)
T COG2382 159 AQELLPYVEERYPTS-ADAD-GRVLAGDSLGGLVSLYAGLRHPER---FGHVLSQSGSFWWTPLDTQPQGEVA------- 226 (299)
T ss_pred HHHhhhhhhccCccc-ccCC-CcEEeccccccHHHHHHHhcCchh---hceeeccCCccccCccccccccchh-------
Confidence 44556666554322 3455 789999999999999999999887 9999999998865432111000000
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeee
Q 024286 167 DRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFY 246 (269)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 246 (269)
..... ...... ...-++...++.+.+.++.+++++.|+..+.++.+.+|+| ||.+.
T Consensus 227 ------------------~~l~~----~~a~~~-~~~~~l~~g~~~~~~~~pNr~L~~~L~~~g~~~~yre~~G-gHdw~ 282 (299)
T COG2382 227 ------------------ESLKI----LHAIGT-DERIVLTTGGEEGDFLRPNRALAAQLEKKGIPYYYREYPG-GHDWA 282 (299)
T ss_pred ------------------hhhhh----hhccCc-cceEEeecCCccccccchhHHHHHHHHhcCCcceeeecCC-CCchh
Confidence 00000 000000 0112444555566778888999999999999999999999 99764
Q ss_pred eC
Q 024286 247 FL 248 (269)
Q Consensus 247 ~~ 248 (269)
.+
T Consensus 283 ~W 284 (299)
T COG2382 283 WW 284 (299)
T ss_pred Hh
Confidence 33
No 129
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=9.4e-10 Score=93.15 Aligned_cols=216 Identities=16% Similarity=0.131 Sum_probs=131.8
Q ss_pred eeecCCCCCCCCCccccccccCC--CCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC--
Q 024286 4 RIYRPTNGEEHRPNIAELEKPVS--SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-- 79 (269)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~p~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-- 79 (269)
|++++.++...- -|.|..-+. .+++.|.+++.|||--+.-..+ |..--..|..+ |+.....|-|++++..
T Consensus 443 r~~~~SkDGt~V--PM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~---f~~srl~lld~-G~Vla~a~VRGGGe~G~~ 516 (712)
T KOG2237|consen 443 RIEVSSKDGTKV--PMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPS---FRASRLSLLDR-GWVLAYANVRGGGEYGEQ 516 (712)
T ss_pred EEEEecCCCCcc--ceEEEEechhhhcCCCceEEEEecccceeeccc---cccceeEEEec-ceEEEEEeeccCcccccc
Confidence 556666554432 223333222 3434599999999543322222 34333344444 9999999999887642
Q ss_pred ---------CCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCC
Q 024286 80 ---------YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQER 150 (269)
Q Consensus 80 ---------~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~ 150 (269)
-.+...|...+.++|.+... ..++ ++++.|.|.||.++...+-+.|+- +.++++-.|+++.-..
T Consensus 517 WHk~G~lakKqN~f~Dfia~AeyLve~gy---t~~~-kL~i~G~SaGGlLvga~iN~rPdL---F~avia~VpfmDvL~t 589 (712)
T KOG2237|consen 517 WHKDGRLAKKQNSFDDFIACAEYLVENGY---TQPS-KLAIEGGSAGGLLVGACINQRPDL---FGAVIAKVPFMDVLNT 589 (712)
T ss_pred hhhccchhhhcccHHHHHHHHHHHHHcCC---CCcc-ceeEecccCccchhHHHhccCchH---hhhhhhcCcceehhhh
Confidence 22446899999999999988 8999 999999999999999888877766 9999999999875421
Q ss_pred Cch----hhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcCh-h-HHHHHHH
Q 024286 151 TES----EKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQ-D-WQLAYME 224 (269)
Q Consensus 151 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~-~-~~~~~~~ 224 (269)
-.. .....-....+.....++ ...+++.+..........|-+|+..+.+|.-+ + .+.++.+
T Consensus 590 ~~~tilplt~sd~ee~g~p~~~~~~-------------~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vA 656 (712)
T KOG2237|consen 590 HKDTILPLTTSDYEEWGNPEDFEDL-------------IKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVA 656 (712)
T ss_pred hccCccccchhhhcccCChhhhhhh-------------heecccCccCCCchhccCcceEEeeccCCCcccccchHHHHH
Confidence 100 000000011111111111 11122222211122212778999999997543 3 3566667
Q ss_pred HHHHCC-------CCeEEEEeCCCceee
Q 024286 225 GLKKAG-------QDVKLLYLEQATIGF 245 (269)
Q Consensus 225 ~l~~~~-------~~~~~~~~~~~~H~~ 245 (269)
+++..- .++-+.+..++||+.
T Consensus 657 klre~~~~~~~q~~pvll~i~~~agH~~ 684 (712)
T KOG2237|consen 657 KLREATCDSLKQTNPVLLRIETKAGHGA 684 (712)
T ss_pred HHHHHhhcchhcCCCEEEEEecCCcccc
Confidence 766442 457889999999974
No 130
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=99.13 E-value=8e-11 Score=96.56 Aligned_cols=139 Identities=19% Similarity=0.232 Sum_probs=103.1
Q ss_pred eecCCCCCCCCCccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCC--------
Q 024286 5 IYRPTNGEEHRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP-------- 76 (269)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~-------- 76 (269)
.|-|-..-...+..++|+.|.....+.-|+|+|-||||..|+.+... +-.+.|+...+..|+.++||.++
T Consensus 109 MWNpNt~lSEDCLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdv--YdGk~la~~envIvVs~NYRvG~FGFL~l~~ 186 (601)
T KOG4389|consen 109 MWNPNTELSEDCLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDV--YDGKFLAAVENVIVVSMNYRVGAFGFLYLPG 186 (601)
T ss_pred ccCCCCCcChhceEEEEeccCCCCCCceEEEEEEcCccccCCcceee--eccceeeeeccEEEEEeeeeeccceEEecCC
Confidence 34455555568889999999543333359999999999999988753 34567777658889999999653
Q ss_pred --CCCCCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCC
Q 024286 77 --ENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 147 (269)
Q Consensus 77 --~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~ 147 (269)
+.+-.-.+-|-.-|++|++++....+.|++ +|.|+|-|+|+.-....++. |.....++.+|+.|+.++.
T Consensus 187 ~~eaPGNmGl~DQqLAl~WV~~Ni~aFGGnp~-~vTLFGESAGaASv~aHLls-P~S~glF~raIlQSGS~~~ 257 (601)
T KOG4389|consen 187 HPEAPGNMGLLDQQLALQWVQENIAAFGGNPS-RVTLFGESAGAASVVAHLLS-PGSRGLFHRAILQSGSLNN 257 (601)
T ss_pred CCCCCCccchHHHHHHHHHHHHhHHHhCCCcc-eEEEeccccchhhhhheecC-CCchhhHHHHHhhcCCCCC
Confidence 333334678999999999999999999999 99999999999866544443 2233456667776655543
No 131
>PRK04940 hypothetical protein; Provisional
Probab=99.08 E-value=1.2e-08 Score=74.55 Aligned_cols=119 Identities=17% Similarity=0.202 Sum_probs=71.7
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCC
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPAC 187 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (269)
++.|+|.|+||+.|.+++.++. -.+|+++|.+...............+. .........+.
T Consensus 61 ~~~liGSSLGGyyA~~La~~~g------~~aVLiNPAv~P~~~L~~~ig~~~~y~---~~~~~h~~eL~----------- 120 (180)
T PRK04940 61 RPLICGVGLGGYWAERIGFLCG------IRQVIFNPNLFPEENMEGKIDRPEEYA---DIATKCVTNFR----------- 120 (180)
T ss_pred CcEEEEeChHHHHHHHHHHHHC------CCEEEECCCCChHHHHHHHhCCCcchh---hhhHHHHHHhh-----------
Confidence 7999999999999999998863 357888998865321111110000000 00000111110
Q ss_pred CCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 188 NPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 188 ~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
.+. -...+++..+.|++.+.- ...+++... .+..+.+|+.|.|. ..++.+..|++|++.
T Consensus 121 ---------~~~--p~r~~vllq~gDEvLDyr-~a~~~y~~~---y~~~v~~GGdH~f~------~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 121 ---------EKN--RDRCLVILSRNDEVLDSQ-RTAEELHPY---YEIVWDEEQTHKFK------NISPHLQRIKAFKTL 179 (180)
T ss_pred ---------hcC--cccEEEEEeCCCcccCHH-HHHHHhccC---ceEEEECCCCCCCC------CHHHHHHHHHHHHhc
Confidence 000 115788999999988763 222333221 26889999999764 468899999999864
No 132
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.01 E-value=8.3e-09 Score=75.63 Aligned_cols=182 Identities=16% Similarity=0.217 Sum_probs=111.1
Q ss_pred EEEEEcC-CccccCCCCchhhHHHHHHHhhcCCCEEEeeccC-CCCCCCCC-CchhhHHHHHHHHHhcccccCCCCCccE
Q 024286 33 VIIFFHG-GSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR-RAPENRYP-CAYDDGWTVLKWAKSRSWLQSKDSKAHI 109 (269)
Q Consensus 33 ~vv~~HG-gg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r-~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~i 109 (269)
.+|++-| |||. .- =...+..|+++ |+.|+.+|-. .+-...-| +...|+.+.++...++ .+.+ ++
T Consensus 4 ~~v~~SGDgGw~---~~---d~~~a~~l~~~-G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~-----w~~~-~v 70 (192)
T PF06057_consen 4 LAVFFSGDGGWR---DL---DKQIAEALAKQ-GVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRAR-----WGRK-RV 70 (192)
T ss_pred EEEEEeCCCCch---hh---hHHHHHHHHHC-CCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHH-----hCCc-eE
Confidence 6788888 7773 11 16778899988 9999999932 22222223 3356788888777776 4566 99
Q ss_pred EEeecCchHHHHHHHHHHhhhc-cccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCC
Q 024286 110 YLAGDSSGGNIVHHVALRAVES-EVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACN 188 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~~~~~-~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (269)
+|+|.|+|+-+.-.+..+.+.. ...++.+++++|........... ..+....... ..
T Consensus 71 vLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~-------------------~wlg~~~~~~---~~ 128 (192)
T PF06057_consen 71 VLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVS-------------------GWLGMGGDDA---AY 128 (192)
T ss_pred EEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhh-------------------hhcCCCCCcc---cC
Confidence 9999999998776666665443 35699999999875433211100 0000000000 00
Q ss_pred CCCCCCCCccCCCCCceeEEecCCCc--ChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhh
Q 024286 189 PFGPKGIDLVGVKFPKSLVVVAGLDL--IQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 189 ~~~~~~~~~~~~~~~P~li~~G~~D~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~ 266 (269)
+. ...+..+...|+++++|++|. .+|. ++ ...++.+..|| ||.|. ...+.+.+.|.+-|+
T Consensus 129 ~~---~pei~~l~~~~v~CiyG~~E~d~~cp~-------l~--~~~~~~i~lpG-gHHfd-----~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 129 PV---IPEIAKLPPAPVQCIYGEDEDDSLCPS-------LR--QPGVEVIALPG-GHHFD-----GDYDALAKRILDALK 190 (192)
T ss_pred Cc---hHHHHhCCCCeEEEEEcCCCCCCcCcc-------cc--CCCcEEEEcCC-CcCCC-----CCHHHHHHHHHHHHh
Confidence 01 111122222489999999875 2331 22 24578899998 66553 347888888888776
Q ss_pred c
Q 024286 267 C 267 (269)
Q Consensus 267 ~ 267 (269)
+
T Consensus 191 ~ 191 (192)
T PF06057_consen 191 A 191 (192)
T ss_pred c
Confidence 5
No 133
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.98 E-value=2.4e-09 Score=82.16 Aligned_cols=114 Identities=10% Similarity=-0.000 Sum_probs=63.5
Q ss_pred hhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhc-----cccccceeeeCCccCCCCCCchhhhhc
Q 024286 84 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES-----EVEILGNILLNPMFGGQERTESEKRLD 158 (269)
Q Consensus 84 ~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~-----~~~~~~~i~~~p~~~~~~~~~~~~~~~ 158 (269)
..++.++++++.+.....+ . =.+|+|+|+||.+|..++...... ...++.+|+++++......
T Consensus 83 ~~~~~~sl~~l~~~i~~~G---P-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENG---P-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred ccCHHHHHHHHHHHHHhcC---C-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 3456677777766544221 1 269999999999999888765432 2468999999987642110
Q ss_pred CCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChh--HHHHHHHHHHHCCCCeEEE
Q 024286 159 GKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLL 236 (269)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~~~~~~~~ 236 (269)
+ .... ....+. .|+|-++|++|.+++ .++.+++.+... .+++
T Consensus 151 ----------------~-----~~~~--------~~~~i~----iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~ 194 (212)
T PF03959_consen 151 ----------------Y-----QELY--------DEPKIS----IPTLHVIGENDPVVPPERSEALAEMFDPD---ARVI 194 (212)
T ss_dssp ----------------G-----TTTT----------TT-------EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEE
T ss_pred ----------------h-----hhhh--------ccccCC----CCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEE
Confidence 0 0000 001112 399999999999998 567777777654 6788
Q ss_pred EeCCCceeee
Q 024286 237 YLEQATIGFY 246 (269)
Q Consensus 237 ~~~~~~H~~~ 246 (269)
..++ ||.++
T Consensus 195 ~h~g-GH~vP 203 (212)
T PF03959_consen 195 EHDG-GHHVP 203 (212)
T ss_dssp EESS-SSS--
T ss_pred EECC-CCcCc
Confidence 8886 88664
No 134
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.96 E-value=9.3e-09 Score=80.29 Aligned_cols=198 Identities=18% Similarity=0.077 Sum_probs=105.4
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHh-hcCCCE--EEeeccC--------CC--CCC---------------CCCCc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLV-GTCKAV--VVSVNYR--------RA--PEN---------------RYPCA 83 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~-~~~g~~--v~~~d~r--------~~--~~~---------------~~~~~ 83 (269)
-..|||||.+ |+..+ +..+++++. +. |.+ ++.++-. +. ... .+..+
T Consensus 12 tPTifihG~~---gt~~s--~~~mi~~~~~~~-~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~q 85 (255)
T PF06028_consen 12 TPTIFIHGYG---GTANS--FNHMINRLENKQ-GVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQ 85 (255)
T ss_dssp EEEEEE--TT---GGCCC--CHHHHHHHHHCS-TS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHH
T ss_pred CcEEEECCCC---CChhH--HHHHHHHHHhhc-CCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHH
Confidence 4679999933 23333 688999997 44 544 3332211 11 010 11122
Q ss_pred hhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhcc--ccccceeeeCCccCCCCCCchh---hh-h
Q 024286 84 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESE--VEILGNILLNPMFGGQERTESE---KR-L 157 (269)
Q Consensus 84 ~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~--~~~~~~i~~~p~~~~~~~~~~~---~~-~ 157 (269)
..-+..++.+|.++ ...+ ++-++||||||..++.++..+.... +.+..+|.++..++........ .. .
T Consensus 86 a~wl~~vl~~L~~~-----Y~~~-~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~ 159 (255)
T PF06028_consen 86 AKWLKKVLKYLKKK-----YHFK-KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLN 159 (255)
T ss_dssp HHHHHHHHHHHHHC-----C--S-EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CS
T ss_pred HHHHHHHHHHHHHh-----cCCC-EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhc
Confidence 33456677777777 5667 9999999999999999999875543 3678888887666544322111 00 0
Q ss_pred cCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecC------CCcChhHH--HHHHHHHHHC
Q 024286 158 DGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAG------LDLIQDWQ--LAYMEGLKKA 229 (269)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~------~D~~~~~~--~~~~~~l~~~ 229 (269)
...+.........+.... . ..+. +...+|.|.|. .|-.||.. ..+...++..
T Consensus 160 ~~gp~~~~~~y~~l~~~~---~---------------~~~p--~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~ 219 (255)
T PF06028_consen 160 KNGPKSMTPMYQDLLKNR---R---------------KNFP--KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNR 219 (255)
T ss_dssp TT-BSS--HHHHHHHHTH---G---------------GGST--TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTT
T ss_pred ccCCcccCHHHHHHHHHH---H---------------hhCC--CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcc
Confidence 111111111111111110 0 0000 01279999998 67788753 3333344444
Q ss_pred CCCeEEEEeCC--CceeeeeCCCCchHHHHHHHHHHHhh
Q 024286 230 GQDVKLLYLEQ--ATIGFYFLPNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 230 ~~~~~~~~~~~--~~H~~~~~~~~~~~~~~~~~i~~fl~ 266 (269)
...++-.++.| +.|+- ..+-.++.+.|.+||=
T Consensus 220 ~~~Y~e~~v~G~~a~HS~-----LheN~~V~~~I~~FLw 253 (255)
T PF06028_consen 220 AKSYQEKTVTGKDAQHSQ-----LHENPQVDKLIIQFLW 253 (255)
T ss_dssp SSEEEEEEEESGGGSCCG-----GGCCHHHHHHHHHHHC
T ss_pred cCceEEEEEECCCCcccc-----CCCCHHHHHHHHHHhc
Confidence 56677777776 47863 3345788889999984
No 135
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.95 E-value=1.1e-07 Score=76.31 Aligned_cols=104 Identities=15% Similarity=0.126 Sum_probs=71.0
Q ss_pred CccccccccCCC-CCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC-----------CC---
Q 024286 16 PNIAELEKPVSS-EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-----------RY--- 80 (269)
Q Consensus 16 ~~~~~~~~p~~~-~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-----------~~--- 80 (269)
.-.+.+..|+.. .+.+|++|++.|.|-..-..+ ...++..|+++ |+..+.+.-+..+.. ..
T Consensus 76 ~a~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR---~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl 151 (348)
T PF09752_consen 76 TARFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRR---RRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDL 151 (348)
T ss_pred heEEEEEECCccccCCCceEEEecCCCccchhhh---hhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHH
Confidence 335677777764 344599999999663211111 13347888888 999998885543321 11
Q ss_pred ----CCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhh
Q 024286 81 ----PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE 130 (269)
Q Consensus 81 ----~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~ 130 (269)
...+.|+...+.|+.+++ .. +++|.|.||||.+|...+...+.
T Consensus 152 ~~~g~~~i~E~~~Ll~Wl~~~G------~~-~~g~~G~SmGG~~A~laa~~~p~ 198 (348)
T PF09752_consen 152 FVMGRATILESRALLHWLEREG------YG-PLGLTGISMGGHMAALAASNWPR 198 (348)
T ss_pred HHHHhHHHHHHHHHHHHHHhcC------CC-ceEEEEechhHhhHHhhhhcCCC
Confidence 122467888899998873 24 89999999999999999987654
No 136
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.93 E-value=1e-09 Score=89.25 Aligned_cols=111 Identities=20% Similarity=0.223 Sum_probs=66.1
Q ss_pred CCcccEEEEEcCCccccCCCCchhhHHHHHHHhhc--CCCEEEeeccCCCCCCCCCCch-------hhHHHHHHHHHhcc
Q 024286 28 EVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGT--CKAVVVSVNYRRAPENRYPCAY-------DDGWTVLKWAKSRS 98 (269)
Q Consensus 28 ~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~--~g~~v~~~d~r~~~~~~~~~~~-------~d~~~~~~~~~~~~ 98 (269)
+.+.|++|++|| |........+...+.+.+... .++.|+++|+.......+.... ..+...+..|.+..
T Consensus 68 n~~~pt~iiiHG--w~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 68 NPSKPTVIIIHG--WTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp -TTSEEEEEE----TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcC--cCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 344599999999 554332344466666666655 4899999998854333333222 23444555565433
Q ss_pred cccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 99 WLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 99 ~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
. ++.+ ++.|+|||+||++|..++..... +..+..+..+-|.-
T Consensus 146 g---~~~~-~ihlIGhSLGAHvaG~aG~~~~~-~~ki~rItgLDPAg 187 (331)
T PF00151_consen 146 G---VPPE-NIHLIGHSLGAHVAGFAGKYLKG-GGKIGRITGLDPAG 187 (331)
T ss_dssp ------GG-GEEEEEETCHHHHHHHHHHHTTT----SSEEEEES-B-
T ss_pred C---CChh-HEEEEeeccchhhhhhhhhhccC-cceeeEEEecCccc
Confidence 2 7888 99999999999999999988766 44577777776654
No 137
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.92 E-value=1.6e-08 Score=78.24 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=72.8
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCC-ch---hhHHHHHHHHHhcccccCCCCCc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPC-AY---DDGWTVLKWAKSRSWLQSKDSKA 107 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~-~~---~d~~~~~~~~~~~~~~~~~~~~~ 107 (269)
.+||=+||.. |++.. |.++...|.+. |++++.++|++++..+-+. .. .+-...++-+.+. ++++ +
T Consensus 36 gTVv~~hGsP---GSH~D--FkYi~~~l~~~-~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~---l~i~-~- 104 (297)
T PF06342_consen 36 GTVVAFHGSP---GSHND--FKYIRPPLDEA-GIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDE---LGIK-G- 104 (297)
T ss_pred eeEEEecCCC---CCccc--hhhhhhHHHHc-CeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHH---cCCC-C-
Confidence 5899999943 46655 88888899888 9999999999987654332 22 2334444444444 3355 5
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
++..+|||.|+-.|+.++... +..|+++++|.=
T Consensus 105 ~~i~~gHSrGcenal~la~~~-----~~~g~~lin~~G 137 (297)
T PF06342_consen 105 KLIFLGHSRGCENALQLAVTH-----PLHGLVLINPPG 137 (297)
T ss_pred ceEEEEeccchHHHHHHHhcC-----ccceEEEecCCc
Confidence 899999999999999999875 367999998763
No 138
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.87 E-value=7.9e-09 Score=91.89 Aligned_cols=91 Identities=14% Similarity=0.093 Sum_probs=61.9
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCC-----------------------------
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYP----------------------------- 81 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~----------------------------- 81 (269)
.|+||++||- .+... .|..+++.|+++ ||.|+++|+|+++++.+.
T Consensus 449 ~P~VVllHG~---~g~~~--~~~~lA~~La~~-Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~ 522 (792)
T TIGR03502 449 WPVVIYQHGI---TGAKE--NALAFAGTLAAA-GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNL 522 (792)
T ss_pred CcEEEEeCCC---CCCHH--HHHHHHHHHHhC-CcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCH
Confidence 3799999992 22333 378889999887 999999999988766332
Q ss_pred -CchhhHHHHHHHHH------hccccc-CCCCCccEEEeecCchHHHHHHHHHHh
Q 024286 82 -CAYDDGWTVLKWAK------SRSWLQ-SKDSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 82 -~~~~d~~~~~~~~~------~~~~~~-~~~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
..+.|+......+. +..... ..+.. ++.++||||||.++..++...
T Consensus 523 rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~-~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 523 RQSILDLLGLRLSLNGSALAGAPLSGINVIDGS-KVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccCCCCC-cEEEEecCHHHHHHHHHHHhc
Confidence 11234444444443 110011 14456 999999999999999998753
No 139
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.86 E-value=1.7e-07 Score=77.65 Aligned_cols=109 Identities=17% Similarity=0.143 Sum_probs=80.3
Q ss_pred CcccEEEEEcC-----CccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCC------------CCCC------Cchh
Q 024286 29 VVVPVIIFFHG-----GSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE------------NRYP------CAYD 85 (269)
Q Consensus 29 ~~~p~vv~~HG-----gg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~------------~~~~------~~~~ 85 (269)
.++|+|++.|| ..|+...+. ...+-.|+.+ ||.|..-+-|+..- ..+. -...
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~----~sLaf~Lada-GYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~y 145 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPE----QSLAFLLADA-GYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTY 145 (403)
T ss_pred CCCCcEEEeeccccccccceecCcc----ccHHHHHHHc-CCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhc
Confidence 56699999999 344433322 2334466667 99999999996321 1111 1346
Q ss_pred hHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCC
Q 024286 86 DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQ 148 (269)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~ 148 (269)
|+.+.++++.+. ...+ ++..+|||.|++.....+...++....++..++++|.....
T Consensus 146 DLPA~IdyIL~~-----T~~~-kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 146 DLPAMIDYILEK-----TGQE-KLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred CHHHHHHHHHHh-----cccc-ceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 999999999988 5677 99999999999999888877655556699999999998554
No 140
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.86 E-value=1.5e-08 Score=78.16 Aligned_cols=107 Identities=14% Similarity=0.114 Sum_probs=66.9
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhh-------cCCCEEEeeccCCCCC----CCCCCchhhHHHHHHHHHhcccc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVG-------TCKAVVVSVNYRRAPE----NRYPCAYDDGWTVLKWAKSRSWL 100 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~-------~~g~~v~~~d~r~~~~----~~~~~~~~d~~~~~~~~~~~~~~ 100 (269)
..|||+|| ..|+... +..+...+.. ...+.+++.||..... .......+-+.++++.+.+....
T Consensus 5 ~pVlFIhG---~~Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 5 IPVLFIHG---NAGSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CEEEEECc---CCCCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhh
Confidence 68999999 3334332 3444433311 1157789999874322 12233445566777777665422
Q ss_pred cCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCc
Q 024286 101 QSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 144 (269)
Q Consensus 101 ~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~ 144 (269)
....++ +|+|+||||||.+|..++.........++.+|.++..
T Consensus 80 ~~~~~~-~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 80 NRPPPR-SVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred ccCCCC-ceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 224667 9999999999999988877654334568888888643
No 141
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.78 E-value=5.5e-07 Score=73.56 Aligned_cols=86 Identities=17% Similarity=0.144 Sum_probs=61.4
Q ss_pred HHHHHHHhhcCCCEEEeeccCCCCCC----CCCCch-hhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHH
Q 024286 53 DILCRRLVGTCKAVVVSVNYRRAPEN----RYPCAY-DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 53 ~~~~~~l~~~~g~~v~~~d~r~~~~~----~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~ 127 (269)
..++..+.+. |..|+.++.+.-... .+++.+ +.+.++++.+++. ...+ +|.++|+|.||+++..+++.
T Consensus 129 ~s~V~~l~~~-g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~i-----tg~~-~InliGyCvGGtl~~~ala~ 201 (445)
T COG3243 129 KSLVRWLLEQ-GLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDI-----TGQK-DINLIGYCVGGTLLAAALAL 201 (445)
T ss_pred ccHHHHHHHc-CCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHH-----hCcc-ccceeeEecchHHHHHHHHh
Confidence 4566677766 999999998864322 223333 5667788888776 4556 99999999999999888887
Q ss_pred hhhccccccceeeeCCccCC
Q 024286 128 AVESEVEILGNILLNPMFGG 147 (269)
Q Consensus 128 ~~~~~~~~~~~i~~~p~~~~ 147 (269)
.+.+ +++.+.++...+|.
T Consensus 202 ~~~k--~I~S~T~lts~~DF 219 (445)
T COG3243 202 MAAK--RIKSLTLLTSPVDF 219 (445)
T ss_pred hhhc--ccccceeeecchhh
Confidence 7655 57777766544443
No 142
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.76 E-value=1.4e-07 Score=80.42 Aligned_cols=122 Identities=12% Similarity=0.143 Sum_probs=85.2
Q ss_pred CccccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHH---HHhhcCCCEEEeeccCCCCCCC-----CC-Cchhh
Q 024286 16 PNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCR---RLVGTCKAVVVSVNYRRAPENR-----YP-CAYDD 86 (269)
Q Consensus 16 ~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~---~l~~~~g~~v~~~d~r~~~~~~-----~~-~~~~d 86 (269)
.+.++||+|++..+. |+++..+=..+............... .++.. ||+|+..|.|+...+. +. ...+|
T Consensus 31 rL~~dIy~Pa~~g~~-Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~-GYavV~qDvRG~~~SeG~~~~~~~~E~~D 108 (563)
T COG2936 31 RLAADIYRPAGAGPL-PVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQ-GYAVVNQDVRGRGGSEGVFDPESSREAED 108 (563)
T ss_pred EEEEEEEccCCCCCC-ceeEEeeccccccccccCcchhhcccccceeecC-ceEEEEecccccccCCcccceeccccccc
Confidence 356799999988554 99999992112111100000122233 46666 9999999999876541 22 36789
Q ss_pred HHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCC
Q 024286 87 GWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 147 (269)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~ 147 (269)
..+.|+|+.++.. ... +|+.+|.|++|+..+++|+..+.. +++++...+..+.
T Consensus 109 g~D~I~Wia~QpW----sNG-~Vgm~G~SY~g~tq~~~Aa~~pPa---Lkai~p~~~~~D~ 161 (563)
T COG2936 109 GYDTIEWLAKQPW----SNG-NVGMLGLSYLGFTQLAAAALQPPA---LKAIAPTEGLVDR 161 (563)
T ss_pred hhHHHHHHHhCCc----cCC-eeeeecccHHHHHHHHHHhcCCch---heeeccccccccc
Confidence 9999999999765 334 799999999999999999875544 8888877777654
No 143
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.73 E-value=9.7e-07 Score=63.52 Aligned_cols=174 Identities=16% Similarity=0.116 Sum_probs=92.1
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 111 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l 111 (269)
+-+|++|| ..+|... .+.+.+.++ --.+-.++.. ..-....+|..+.+....+. -++ .++|
T Consensus 3 ~~~lIVpG---~~~Sg~~----HWq~~we~~-l~~a~rveq~----~w~~P~~~dWi~~l~~~v~a------~~~-~~vl 63 (181)
T COG3545 3 TDVLIVPG---YGGSGPN----HWQSRWESA-LPNARRVEQD----DWEAPVLDDWIARLEKEVNA------AEG-PVVL 63 (181)
T ss_pred ceEEEecC---CCCCChh----HHHHHHHhh-CccchhcccC----CCCCCCHHHHHHHHHHHHhc------cCC-CeEE
Confidence 57899999 3334443 333444443 2222222211 11112234444444333333 234 6999
Q ss_pred eecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCC
Q 024286 112 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFG 191 (269)
Q Consensus 112 ~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (269)
++||.|+..+++.+.+... .|.|+.+.+|.-.......... .. .+..
T Consensus 64 VAHSLGc~~v~h~~~~~~~---~V~GalLVAppd~~~~~~~~~~-------------------~~--tf~~--------- 110 (181)
T COG3545 64 VAHSLGCATVAHWAEHIQR---QVAGALLVAPPDVSRPEIRPKH-------------------LM--TFDP--------- 110 (181)
T ss_pred EEecccHHHHHHHHHhhhh---ccceEEEecCCCccccccchhh-------------------cc--ccCC---------
Confidence 9999999999999987654 5999999999753221100000 00 0000
Q ss_pred CCCCCccCCCCC-ceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhh
Q 024286 192 PKGIDLVGVKFP-KSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 192 ~~~~~~~~~~~~-P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~ 266 (269)
.....+| |.+++++++|++++.... +.+.+. ....++....+||-- .........+....+.+|+.
T Consensus 111 -----~p~~~lpfps~vvaSrnDp~~~~~~a--~~~a~~-wgs~lv~~g~~GHiN-~~sG~g~wpeg~~~l~~~~s 177 (181)
T COG3545 111 -----IPREPLPFPSVVVASRNDPYVSYEHA--EDLANA-WGSALVDVGEGGHIN-AESGFGPWPEGYALLAQLLS 177 (181)
T ss_pred -----CccccCCCceeEEEecCCCCCCHHHH--HHHHHh-ccHhheecccccccc-hhhcCCCcHHHHHHHHHHhh
Confidence 0000122 899999999999876322 333222 233667777788832 22223334555555555554
No 144
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.69 E-value=1.4e-07 Score=73.42 Aligned_cols=103 Identities=21% Similarity=0.182 Sum_probs=72.0
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCC-CCCCCCchhhH-HHHHHHHHhcccccCCCCCccE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAP-ENRYPCAYDDG-WTVLKWAKSRSWLQSKDSKAHI 109 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~-~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~i 109 (269)
+.|+++|++|. +.. .|..+++.+... .+.|+.+++++.. .......++++ ...++.+.+. .... ++
T Consensus 1 ~~lf~~p~~gG---~~~--~y~~la~~l~~~-~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~-----~~~g-p~ 68 (229)
T PF00975_consen 1 RPLFCFPPAGG---SAS--SYRPLARALPDD-VIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRAR-----QPEG-PY 68 (229)
T ss_dssp -EEEEESSTTC---SGG--GGHHHHHHHTTT-EEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHH-----TSSS-SE
T ss_pred CeEEEEcCCcc---CHH--HHHHHHHhCCCC-eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhh-----CCCC-Ce
Confidence 36889999652 332 388999999875 5899999988764 11222333443 3344455444 2334 89
Q ss_pred EEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 110 YLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
.|+|||+||.+|..+|.+..+.+..+..++++.+...
T Consensus 69 ~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 69 VLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred eehccCccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 9999999999999999998888788999999885543
No 145
>COG3150 Predicted esterase [General function prediction only]
Probab=98.69 E-value=2e-06 Score=61.24 Aligned_cols=121 Identities=17% Similarity=0.189 Sum_probs=63.4
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCC
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPAC 187 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (269)
.+.|+|-|.||+.|.+++.+.. ++ .|+++|.+....... .++....+.-....
T Consensus 60 ~p~ivGssLGGY~At~l~~~~G-----ir-av~~NPav~P~e~l~---------------------gylg~~en~ytg~~ 112 (191)
T COG3150 60 SPLIVGSSLGGYYATWLGFLCG-----IR-AVVFNPAVRPYELLT---------------------GYLGRPENPYTGQE 112 (191)
T ss_pred CceEEeecchHHHHHHHHHHhC-----Ch-hhhcCCCcCchhhhh---------------------hhcCCCCCCCCcce
Confidence 6999999999999999998753 33 455677664332111 11111100000000
Q ss_pred CCC------CCCCCCccCCCCCceeEEecCC-CcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHH
Q 024286 188 NPF------GPKGIDLVGVKFPKSLVVVAGL-DLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDE 260 (269)
Q Consensus 188 ~~~------~~~~~~~~~~~~~P~li~~G~~-D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 260 (269)
..+ ......+..++.|..+.+-.+. |.+.+. ++..+.+. .+...+++|..|.|. ...+.++.
T Consensus 113 y~le~~hI~~l~~~~~~~l~~p~~~~lL~qtgDEvLDy-r~a~a~y~----~~~~~V~dgg~H~F~------~f~~~l~~ 181 (191)
T COG3150 113 YVLESRHIATLCVLQFRELNRPRCLVLLSQTGDEVLDY-RQAVAYYH----PCYEIVWDGGDHKFK------GFSRHLQR 181 (191)
T ss_pred EEeehhhHHHHHHhhccccCCCcEEEeecccccHHHHH-HHHHHHhh----hhhheeecCCCcccc------chHHhHHH
Confidence 000 0000111111234444444444 887654 22223333 346688899999875 35778889
Q ss_pred HHHHhh
Q 024286 261 ISNFVS 266 (269)
Q Consensus 261 i~~fl~ 266 (269)
|+.|+.
T Consensus 182 i~aF~g 187 (191)
T COG3150 182 IKAFKG 187 (191)
T ss_pred HHHHhc
Confidence 988874
No 146
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.64 E-value=1.4e-06 Score=72.44 Aligned_cols=108 Identities=9% Similarity=0.008 Sum_probs=67.3
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 111 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l 111 (269)
|.|+++-. .+|. .......+.+.|.. |+.|+..|+......+....-.+..+.++++.+.... + .. ++.+
T Consensus 103 ~pvLiV~P---l~g~-~~~L~RS~V~~Ll~--g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~--~-G~-~v~l 172 (406)
T TIGR01849 103 PAVLIVAP---MSGH-YATLLRSTVEALLP--DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRF--L-GP-DIHV 172 (406)
T ss_pred CcEEEEcC---CchH-HHHHHHHHHHHHhC--CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHH--h-CC-CCcE
Confidence 56666655 2222 11123555666665 9999999988655443333333333333444443321 2 23 5999
Q ss_pred eecCchHHHHHHHHHHhhhcc--ccccceeeeCCccCCCC
Q 024286 112 AGDSSGGNIVHHVALRAVESE--VEILGNILLNPMFGGQE 149 (269)
Q Consensus 112 ~G~S~Gg~la~~~a~~~~~~~--~~~~~~i~~~p~~~~~~ 149 (269)
+|.|+||.+++.+++...+.. ..++.++++.+.+|...
T Consensus 173 ~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 173 IAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred EEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 999999999988777765543 35899999988877654
No 147
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.64 E-value=5.3e-06 Score=64.22 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=39.0
Q ss_pred CCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCC
Q 024286 102 SKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE 149 (269)
Q Consensus 102 ~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~ 149 (269)
.++.+ +.+|+|||+||.+++.....+++. +...++.||.+....
T Consensus 133 ~~~~~-~~~i~GhSlGGLfvl~aLL~~p~~---F~~y~~~SPSlWw~n 176 (264)
T COG2819 133 RTNSE-RTAIIGHSLGGLFVLFALLTYPDC---FGRYGLISPSLWWHN 176 (264)
T ss_pred ccCcc-cceeeeecchhHHHHHHHhcCcch---hceeeeecchhhhCC
Confidence 38888 999999999999999999988776 999999999886553
No 148
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.58 E-value=3e-06 Score=63.37 Aligned_cols=106 Identities=15% Similarity=0.079 Sum_probs=67.7
Q ss_pred EEeecCchHHHHHHHHHHhhh-----ccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCC
Q 024286 110 YLAGDSSGGNIVHHVALRAVE-----SEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDH 184 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~~~~-----~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (269)
+|+|+|.|+.++..++..... ....++-+|++|++........ ..+
T Consensus 107 GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~--------------------~~~--------- 157 (230)
T KOG2551|consen 107 GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLD--------------------ESA--------- 157 (230)
T ss_pred cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhh--------------------hhh---------
Confidence 899999999999999872211 1245788899998875421000 000
Q ss_pred CCCCCCCCCCCCccCCCCCceeEEecCCCcChhHH--HHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHH
Q 024286 185 PACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEIS 262 (269)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~ 262 (269)
....++ .|.|-+.|+.|.+++.. ..+++.++ +...+.-+| ||-++ ......+.+.
T Consensus 158 --------~~~~i~----~PSLHi~G~~D~iv~~~~s~~L~~~~~----~a~vl~Hpg-gH~VP------~~~~~~~~i~ 214 (230)
T KOG2551|consen 158 --------YKRPLS----TPSLHIFGETDTIVPSERSEQLAESFK----DATVLEHPG-GHIVP------NKAKYKEKIA 214 (230)
T ss_pred --------hccCCC----CCeeEEecccceeecchHHHHHHHhcC----CCeEEecCC-CccCC------CchHHHHHHH
Confidence 001122 39999999999998864 44444444 335666665 89643 3456777888
Q ss_pred HHhhc
Q 024286 263 NFVSC 267 (269)
Q Consensus 263 ~fl~~ 267 (269)
+||.+
T Consensus 215 ~fi~~ 219 (230)
T KOG2551|consen 215 DFIQS 219 (230)
T ss_pred HHHHH
Confidence 88764
No 149
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.57 E-value=2.6e-06 Score=67.90 Aligned_cols=93 Identities=18% Similarity=0.187 Sum_probs=64.6
Q ss_pred cEEEEEcCCccccCCCCc-hhhHHHHHHHhhcCCCEEEeeccCCCCCCCC----CCchhhHHHHHHHHHhcccccCCCCC
Q 024286 32 PVIIFFHGGSFAHSSANS-AIYDILCRRLVGTCKAVVVSVNYRRAPENRY----PCAYDDGWTVLKWAKSRSWLQSKDSK 106 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~-~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~ 106 (269)
..|++.-|.|...-.... ......+..++...|.+|+.++||+-+.++- .+.+.|..+.++|+.+.. .++.++
T Consensus 138 RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~--~G~ka~ 215 (365)
T PF05677_consen 138 RWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEE--QGPKAK 215 (365)
T ss_pred cEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcc--cCCChh
Confidence 689999995543211000 0012346677887799999999998765533 344567778888887642 236788
Q ss_pred ccEEEeecCchHHHHHHHHHH
Q 024286 107 AHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 107 ~~i~l~G~S~Gg~la~~~a~~ 127 (269)
+|++.|||+||.++...+.+
T Consensus 216 -~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 216 -NIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred -eEEEeeccccHHHHHHHHHh
Confidence 99999999999999886554
No 150
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.55 E-value=9e-08 Score=60.83 Aligned_cols=42 Identities=21% Similarity=0.224 Sum_probs=35.2
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR 79 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~ 79 (269)
.+|+++||-+.. ...+..+++.|++. ||.|+++|+|+++.+.
T Consensus 17 ~~v~i~HG~~eh-----~~ry~~~a~~L~~~-G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 17 AVVVIVHGFGEH-----SGRYAHLAEFLAEQ-GYAVFAYDHRGHGRSE 58 (79)
T ss_pred EEEEEeCCcHHH-----HHHHHHHHHHHHhC-CCEEEEECCCcCCCCC
Confidence 899999995432 22388999999998 9999999999998774
No 151
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.53 E-value=9.9e-07 Score=70.06 Aligned_cols=116 Identities=17% Similarity=0.192 Sum_probs=77.0
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhc--CCCEEEeeccCCCCCCCCC----------CchhhHHHHHHHHHhccc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGT--CKAVVVSVNYRRAPENRYP----------CAYDDGWTVLKWAKSRSW 99 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~--~g~~v~~~d~r~~~~~~~~----------~~~~d~~~~~~~~~~~~~ 99 (269)
+.+++|.|... -.+.|..+++.|.+. ..+.|+++.+.++...... .-.+.+.-.++.+.+...
T Consensus 3 ~li~~IPGNPG-----lv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 3 PLIVFIPGNPG-----LVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred EEEEEECCCCC-----hHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhh
Confidence 78999999442 233478888888865 3899999999877433222 111233334444444322
Q ss_pred ccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCch
Q 024286 100 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTES 153 (269)
Q Consensus 100 ~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 153 (269)
....... +++|+|||.|+++++.++.+.++....+.+++++-|.+......++
T Consensus 78 ~~~~~~~-~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~ 130 (266)
T PF10230_consen 78 QKNKPNV-KLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPN 130 (266)
T ss_pred hhcCCCC-cEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCch
Confidence 1111334 8999999999999999999987444669999999999765544333
No 152
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.52 E-value=7.8e-06 Score=67.10 Aligned_cols=111 Identities=23% Similarity=0.140 Sum_probs=75.8
Q ss_pred CCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC----------------------------
Q 024286 27 SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN---------------------------- 78 (269)
Q Consensus 27 ~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~---------------------------- 78 (269)
++.+ ..|+++.|.| ++.++.....+.+.+|+..+.+|+.++|......
T Consensus 32 Ke~k-aIvfiI~GfG---~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~~L~~i~i~~ 107 (403)
T PF11144_consen 32 KEIK-AIVFIIPGFG---ADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKKSLEKINIDS 107 (403)
T ss_pred CCce-EEEEEeCCcC---CCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHHHHHHHcCccc
Confidence 4444 6777887733 4666666678889999988888999998743100
Q ss_pred -C--------------------------CC-----------------------CchhhHHHHHHHHHhcccccCCCCCcc
Q 024286 79 -R--------------------------YP-----------------------CAYDDGWTVLKWAKSRSWLQSKDSKAH 108 (269)
Q Consensus 79 -~--------------------------~~-----------------------~~~~d~~~~~~~~~~~~~~~~~~~~~~ 108 (269)
. .+ -+.-|...|+.++++.....+ +.- +
T Consensus 108 ~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~~~~-~~l-p 185 (403)
T PF11144_consen 108 ESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFPKNG-GGL-P 185 (403)
T ss_pred cccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhhccc-CCC-c
Confidence 0 00 001366777777777743222 223 8
Q ss_pred EEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 109 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
++++|+|.||++|...|.-.|.. +++++--|.++.
T Consensus 186 ~I~~G~s~G~yla~l~~k~aP~~---~~~~iDns~~~~ 220 (403)
T PF11144_consen 186 KIYIGSSHGGYLAHLCAKIAPWL---FDGVIDNSSYAL 220 (403)
T ss_pred EEEEecCcHHHHHHHHHhhCccc---eeEEEecCcccc
Confidence 99999999999999999876655 888888887764
No 153
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.50 E-value=3.1e-05 Score=59.12 Aligned_cols=103 Identities=15% Similarity=0.145 Sum_probs=66.8
Q ss_pred EEEEEcCCccccCCCCchhhHHHHHHHhhcCC----CEEEeeccCCC----------C------------CCCCCCchhh
Q 024286 33 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCK----AVVVSVNYRRA----------P------------ENRYPCAYDD 86 (269)
Q Consensus 33 ~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g----~~v~~~d~r~~----------~------------~~~~~~~~~d 86 (269)
..||+||.| |..++ +..+++++..+.. --++.+|--++ . ..+...+..=
T Consensus 47 PTIfIhGsg---G~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 47 PTIFIHGSG---GTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ceEEEecCC---CChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 358999944 34444 6888889987621 12444442221 0 1112223334
Q ss_pred HHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhcc--ccccceeeeCCccC
Q 024286 87 GWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESE--VEILGNILLNPMFG 146 (269)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~--~~~~~~i~~~p~~~ 146 (269)
+..++.+|+++ .+.+ ++-.+||||||.-...++..+.... ..+...+.+.+-++
T Consensus 122 lk~~msyL~~~-----Y~i~-k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 122 LKKAMSYLQKH-----YNIP-KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHh-----cCCc-eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 56777888887 5667 9999999999999999998885542 45777787776655
No 154
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.49 E-value=1.6e-06 Score=69.90 Aligned_cols=102 Identities=15% Similarity=0.182 Sum_probs=63.7
Q ss_pred CcccEEEEEcCCccccCCCCc---------hhhHHHH---HHHhhcCCCEEEeeccCCCCC-C---------------CC
Q 024286 29 VVVPVIIFFHGGSFAHSSANS---------AIYDILC---RRLVGTCKAVVVSVNYRRAPE-N---------------RY 80 (269)
Q Consensus 29 ~~~p~vv~~HGgg~~~~~~~~---------~~~~~~~---~~l~~~~g~~v~~~d~r~~~~-~---------------~~ 80 (269)
.+..+|+++|| ..|+... .||..++ +.+--+ .|-|++.|--+++. + .|
T Consensus 49 ~~~NaVli~Ha---LtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~-r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~F 124 (368)
T COG2021 49 EKDNAVLICHA---LTGDSHAAGTADDGEKGWWDDLIGPGKPIDTE-RFFVICTNVLGGCKGSTGPSSINPGGKPYGSDF 124 (368)
T ss_pred cCCceEEEecc---ccCcccccccCCCCCCccHHHhcCCCCCCCcc-ceEEEEecCCCCCCCCCCCCCcCCCCCccccCC
Confidence 33489999999 3332211 1333332 122223 58899999775531 1 22
Q ss_pred C-CchhhHHHHHHHHHhcccccCCCCCccEE-EeecCchHHHHHHHHHHhhhccccccceeeeCC
Q 024286 81 P-CAYDDGWTVLKWAKSRSWLQSKDSKAHIY-LAGDSSGGNIVHHVALRAVESEVEILGNILLNP 143 (269)
Q Consensus 81 ~-~~~~d~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p 143 (269)
| -.++|...+-+.+.+. ...+ ++. ++|.||||+.|+..+..+++. +..++.++.
T Consensus 125 P~~ti~D~V~aq~~ll~~-----LGI~-~l~avvGgSmGGMqaleWa~~yPd~---V~~~i~ia~ 180 (368)
T COG2021 125 PVITIRDMVRAQRLLLDA-----LGIK-KLAAVVGGSMGGMQALEWAIRYPDR---VRRAIPIAT 180 (368)
T ss_pred CcccHHHHHHHHHHHHHh-----cCcc-eEeeeeccChHHHHHHHHHHhChHH---Hhhhheecc
Confidence 3 1245776666666665 3445 666 999999999999999999887 655555543
No 155
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.48 E-value=1.7e-06 Score=67.20 Aligned_cols=105 Identities=15% Similarity=0.124 Sum_probs=61.6
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCC--EEEeeccCCCCCC-CCCCc-------hhhHHHHHHHHHhccccc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKA--VVVSVNYRRAPEN-RYPCA-------YDDGWTVLKWAKSRSWLQ 101 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~--~v~~~d~r~~~~~-~~~~~-------~~d~~~~~~~~~~~~~~~ 101 (269)
.++||+|| |.. .... -...+.++....++ .++.+.++..+.. .+... .....+.++.+.+.
T Consensus 19 ~vlvfVHG--yn~--~f~~-a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~---- 89 (233)
T PF05990_consen 19 EVLVFVHG--YNN--SFED-ALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA---- 89 (233)
T ss_pred eEEEEEeC--CCC--CHHH-HHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc----
Confidence 79999999 421 1111 11222333433344 6888888755432 11111 12233344444443
Q ss_pred CCCCCccEEEeecCchHHHHHHHHHHhhhcc------ccccceeeeCCccCC
Q 024286 102 SKDSKAHIYLAGDSSGGNIVHHVALRAVESE------VEILGNILLNPMFGG 147 (269)
Q Consensus 102 ~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~------~~~~~~i~~~p~~~~ 147 (269)
.... +|.|++||||+.+.+.......... ..+..+++.+|=++.
T Consensus 90 -~~~~-~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 90 -PGIK-RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred -cCCc-eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 2445 9999999999999998877654332 357888999886653
No 156
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.48 E-value=2e-07 Score=70.48 Aligned_cols=192 Identities=15% Similarity=0.069 Sum_probs=94.1
Q ss_pred ccCCCC-CcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCC-CC-------CCCCCchhhHHHHHHH
Q 024286 23 KPVSSE-VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA-PE-------NRYPCAYDDGWTVLKW 93 (269)
Q Consensus 23 ~p~~~~-~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-~~-------~~~~~~~~d~~~~~~~ 93 (269)
.|++.. .+.|+||+..| | ..++.-+..++.+|+.. |++|+.+|--.+ +. .+......++..+++|
T Consensus 21 ~P~~~~~~~~~tiliA~G--f---~rrmdh~agLA~YL~~N-GFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dw 94 (294)
T PF02273_consen 21 RPKNNEPKRNNTILIAPG--F---ARRMDHFAGLAEYLSAN-GFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDW 94 (294)
T ss_dssp ---TTS---S-EEEEE-T--T----GGGGGGHHHHHHHHTT-T--EEEE---B-------------HHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCeEEEecc--h---hHHHHHHHHHHHHHhhC-CeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHH
Confidence 455532 33489999999 3 33444488999999988 999999995532 11 1233445788999999
Q ss_pred HHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhh----------------h
Q 024286 94 AKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKR----------------L 157 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~----------------~ 157 (269)
+.++ ..+ +++|+.-|.-|-+|..++.+. .+.-+|..-++++.......... +
T Consensus 95 l~~~------g~~-~~GLIAaSLSaRIAy~Va~~i-----~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldf 162 (294)
T PF02273_consen 95 LATR------GIR-RIGLIAASLSARIAYEVAADI-----NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDF 162 (294)
T ss_dssp HHHT------T----EEEEEETTHHHHHHHHTTTS-------SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEEEE
T ss_pred HHhc------CCC-cchhhhhhhhHHHHHHHhhcc-----CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCcccc
Confidence 9976 456 899999999999999998642 37777777777754322111000 0
Q ss_pred cCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHC-CCCeEEE
Q 024286 158 DGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKA-GQDVKLL 236 (269)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~-~~~~~~~ 236 (269)
..-............+.- -.. +.....+++.+ ..|++..+++.|.-|.+. ...+.+... ...+++.
T Consensus 163 eGh~l~~~vFv~dc~e~~----w~~-------l~ST~~~~k~l-~iP~iaF~A~~D~WV~q~-eV~~~~~~~~s~~~kly 229 (294)
T PF02273_consen 163 EGHNLGAEVFVTDCFEHG----WDD-------LDSTINDMKRL-SIPFIAFTANDDDWVKQS-EVEELLDNINSNKCKLY 229 (294)
T ss_dssp TTEEEEHHHHHHHHHHTT-----SS-------HHHHHHHHTT---S-EEEEEETT-TTS-HH-HHHHHHTT-TT--EEEE
T ss_pred cccccchHHHHHHHHHcC----Ccc-------chhHHHHHhhC-CCCEEEEEeCCCccccHH-HHHHHHHhcCCCceeEE
Confidence 000011111111111110 000 00000111111 249999999999888764 333444433 3568999
Q ss_pred EeCCCceee
Q 024286 237 YLEQATIGF 245 (269)
Q Consensus 237 ~~~~~~H~~ 245 (269)
..+|+.|.+
T Consensus 230 sl~Gs~HdL 238 (294)
T PF02273_consen 230 SLPGSSHDL 238 (294)
T ss_dssp EETT-SS-T
T ss_pred EecCccchh
Confidence 999999975
No 157
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.47 E-value=3e-06 Score=63.70 Aligned_cols=68 Identities=21% Similarity=0.212 Sum_probs=50.8
Q ss_pred hHHHHHHHhhcCCCEEEeeccCCCCCCCCC-----------CchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHH
Q 024286 52 YDILCRRLVGTCKAVVVSVNYRRAPENRYP-----------CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNI 120 (269)
Q Consensus 52 ~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~-----------~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~l 120 (269)
+..+++..+.+ ||.|+..|||+.+++.-. -...|...+++++++.. ..- +...+|||+||.+
T Consensus 46 YRrfA~~a~~~-Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~-----~~~-P~y~vgHS~GGqa 118 (281)
T COG4757 46 YRRFAAAAAKA-GFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL-----PGH-PLYFVGHSFGGQA 118 (281)
T ss_pred hHHHHHHhhcc-CceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhC-----CCC-ceEEeecccccee
Confidence 56667677767 999999999998765311 12468899999998863 223 8999999999987
Q ss_pred HHHHHH
Q 024286 121 VHHVAL 126 (269)
Q Consensus 121 a~~~a~ 126 (269)
...+..
T Consensus 119 ~gL~~~ 124 (281)
T COG4757 119 LGLLGQ 124 (281)
T ss_pred eccccc
Confidence 665554
No 158
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.44 E-value=0.00012 Score=61.78 Aligned_cols=95 Identities=16% Similarity=0.082 Sum_probs=60.6
Q ss_pred CCcccEEEEE----cCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCC
Q 024286 28 EVVVPVIIFF----HGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSK 103 (269)
Q Consensus 28 ~~~~p~vv~~----HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 103 (269)
..|+|+||.= ||-| +.|.+.. .+.-..|. . |..|+.+.+.-.|+. ...+.|+..+.....+......-
T Consensus 66 ~~krP~vViDPRAGHGpG-IGGFK~d---SevG~AL~-~-GHPvYFV~F~p~P~p--gQTl~DV~~ae~~Fv~~V~~~hp 137 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPG-IGGFKPD---SEVGVALR-A-GHPVYFVGFFPEPEP--GQTLEDVMRAEAAFVEEVAERHP 137 (581)
T ss_pred CCCCCeEEeCCCCCCCCC-ccCCCcc---cHHHHHHH-c-CCCeEEEEecCCCCC--CCcHHHHHHHHHHHHHHHHHhCC
Confidence 4566877764 6643 4445543 23333443 3 988888887754443 23456665554444444333334
Q ss_pred CCCccEEEeecCchHHHHHHHHHHhhhc
Q 024286 104 DSKAHIYLAGDSSGGNIVHHVALRAVES 131 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg~la~~~a~~~~~~ 131 (269)
+.. +.+|+|.+.||..++.+|+..++.
T Consensus 138 ~~~-kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 138 DAP-KPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred CCC-CceEEeccHHHHHHHHHHhcCcCc
Confidence 555 899999999999999999988775
No 159
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.44 E-value=3.6e-07 Score=69.74 Aligned_cols=84 Identities=13% Similarity=0.166 Sum_probs=50.3
Q ss_pred EEEEEcCCccccCCCCchhhHHHHHHHhhcCCCE---EEeeccCCCCCCCCC-------CchhhHHHHHHHHHhcccccC
Q 024286 33 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAV---VVSVNYRRAPENRYP-------CAYDDGWTVLKWAKSRSWLQS 102 (269)
Q Consensus 33 ~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~---v~~~d~r~~~~~~~~-------~~~~d~~~~~~~~~~~~~~~~ 102 (269)
.|||+||.+ ++ ....|..+++.|.++ ||. |++++|-........ +...++.++++-+.+.
T Consensus 3 PVVlVHG~~---~~-~~~~w~~~~~~l~~~-GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~----- 72 (219)
T PF01674_consen 3 PVVLVHGTG---GN-AYSNWSTLAPYLKAA-GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAY----- 72 (219)
T ss_dssp -EEEE--TT---TT-TCGGCCHHHHHHHHT-T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHH-----
T ss_pred CEEEECCCC---cc-hhhCHHHHHHHHHHc-CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHh-----
Confidence 589999943 22 333488999999998 999 899999754432211 1123566666666554
Q ss_pred CCCCccEEEeecCchHHHHHHHHHHh
Q 024286 103 KDSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 103 ~~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
... +|=|+||||||.++.++....
T Consensus 73 -TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 73 -TGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp -HT---EEEEEETCHHHHHHHHHHHC
T ss_pred -hCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 224 799999999999999887643
No 160
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.42 E-value=5.7e-05 Score=61.31 Aligned_cols=193 Identities=13% Similarity=0.105 Sum_probs=115.0
Q ss_pred cccccccCCCCCcccEEEEEcCCccccCCCCc-hhhHHHHHHHhhcCCCEEEeeccCCCC-----C-------------C
Q 024286 18 IAELEKPVSSEVVVPVIIFFHGGSFAHSSANS-AIYDILCRRLVGTCKAVVVSVNYRRAP-----E-------------N 78 (269)
Q Consensus 18 ~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~-~~~~~~~~~l~~~~g~~v~~~d~r~~~-----~-------------~ 78 (269)
.+-+|+|........+||++||-|. +.++ .....+-+.|... |+.++++..+.-. . .
T Consensus 74 flaL~~~~~~~~~~G~vIilp~~g~---~~d~p~~i~~LR~~L~~~-GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~ 149 (310)
T PF12048_consen 74 FLALWRPANSAKPQGAVIILPDWGE---HPDWPGLIAPLRRELPDH-GWATLSITLPDPAPPASPNRATEAEEVPSAGDQ 149 (310)
T ss_pred EEEEEecccCCCCceEEEEecCCCC---CCCcHhHHHHHHHHhhhc-CceEEEecCCCcccccCCccCCCCCCCCCCCCC
Confidence 4578888877666699999999554 3332 3345666677666 9999998766410 0 0
Q ss_pred --CCC--------------------CchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhcccccc
Q 024286 79 --RYP--------------------CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEIL 136 (269)
Q Consensus 79 --~~~--------------------~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~ 136 (269)
.-+ ....-+..++.++.++. .+ +++|+||+.|++.++.+....+ ...+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~------~~-~ivlIg~G~gA~~~~~~la~~~--~~~~d 220 (310)
T PF12048_consen 150 QLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG------GK-NIVLIGHGTGAGWAARYLAEKP--PPMPD 220 (310)
T ss_pred CcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC------Cc-eEEEEEeChhHHHHHHHHhcCC--CcccC
Confidence 000 01123455666666653 23 5999999999999998887643 23488
Q ss_pred ceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcCh
Q 024286 137 GNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQ 216 (269)
Q Consensus 137 ~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~ 216 (269)
++|+++|.......... .... .... ..|+|=+++......
T Consensus 221 aLV~I~a~~p~~~~n~~------------------l~~~------------------la~l----~iPvLDi~~~~~~~~ 260 (310)
T PF12048_consen 221 ALVLINAYWPQPDRNPA------------------LAEQ------------------LAQL----KIPVLDIYSADNPAS 260 (310)
T ss_pred eEEEEeCCCCcchhhhh------------------HHHH------------------hhcc----CCCEEEEecCCChHH
Confidence 99999997644321000 0000 0011 138888888763323
Q ss_pred hHHHHHHH-HHHHC-CCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 217 DWQLAYME-GLKKA-GQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 217 ~~~~~~~~-~l~~~-~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.......+ ..++. ...++.....+..|... .....+.++|..||+++
T Consensus 261 ~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~-----~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 261 QQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPS-----GWQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHHHHHhccCCCceeEecCCCCCChh-----hHHHHHHHHHHHHHHhh
Confidence 22222212 22222 35677777887777432 12234999999999876
No 161
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.35 E-value=4.9e-05 Score=58.34 Aligned_cols=188 Identities=19% Similarity=0.124 Sum_probs=102.8
Q ss_pred cccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCch----hhHHHHHHHHH
Q 024286 20 ELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAY----DDGWTVLKWAK 95 (269)
Q Consensus 20 ~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~----~d~~~~~~~~~ 95 (269)
++..|+. + -.||.+=||+|+. ..-.-.|..+++.|+++ ||.|++.-|... .++.... +....+++.+.
T Consensus 9 wvl~P~~--P--~gvihFiGGaf~g-a~P~itYr~lLe~La~~-Gy~ViAtPy~~t--fDH~~~A~~~~~~f~~~~~~L~ 80 (250)
T PF07082_consen 9 WVLIPPR--P--KGVIHFIGGAFVG-AAPQITYRYLLERLADR-GYAVIATPYVVT--FDHQAIAREVWERFERCLRALQ 80 (250)
T ss_pred EEEeCCC--C--CEEEEEcCcceec-cCcHHHHHHHHHHHHhC-CcEEEEEecCCC--CcHHHHHHHHHHHHHHHHHHHH
Confidence 4555542 2 3788888998764 45556699999999998 999999988752 2222222 23334444555
Q ss_pred hcccccCCCCC-ccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCC--CCCchhhhhc---CCcccc-hHHH
Q 024286 96 SRSWLQSKDSK-AHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQ--ERTESEKRLD---GKYFVT-VQDR 168 (269)
Q Consensus 96 ~~~~~~~~~~~-~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~--~~~~~~~~~~---~~~~~~-~~~~ 168 (269)
+... .... .+++=+|||+|+-+-+.+...+... -+|-+++| +-+.. ..-+-..... ...+.+ ....
T Consensus 81 ~~~~---~~~~~lP~~~vGHSlGcklhlLi~s~~~~~---r~gniliS-FNN~~a~~aIP~~~~l~~~l~~EF~PsP~ET 153 (250)
T PF07082_consen 81 KRGG---LDPAYLPVYGVGHSLGCKLHLLIGSLFDVE---RAGNILIS-FNNFPADEAIPLLEQLAPALRLEFTPSPEET 153 (250)
T ss_pred HhcC---CCcccCCeeeeecccchHHHHHHhhhccCc---ccceEEEe-cCChHHHhhCchHhhhccccccCccCCHHHH
Confidence 4432 2211 2677899999999988887665332 34545543 00000 0000000000 001100 1111
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCC-eEEEEeCCCceeeee
Q 024286 169 DWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQD-VKLLYLEQATIGFYF 247 (269)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~H~~~~ 247 (269)
....+... ..+.+|++.=++|.+ +++..+.+.|+....+ ++....+| .|....
T Consensus 154 ~~li~~~Y------------------------~~~rnLLIkF~~D~i-Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTPl 207 (250)
T PF07082_consen 154 RRLIRESY------------------------QVRRNLLIKFNDDDI-DQTDELEQILQQRFPDMVSIQTLPG-NHLTPL 207 (250)
T ss_pred HHHHHHhc------------------------CCccceEEEecCCCc-cchHHHHHHHhhhccccceEEeCCC-CCCCcC
Confidence 11111110 023677887777876 5677777888766433 67777775 887655
Q ss_pred C
Q 024286 248 L 248 (269)
Q Consensus 248 ~ 248 (269)
.
T Consensus 208 ~ 208 (250)
T PF07082_consen 208 G 208 (250)
T ss_pred c
Confidence 3
No 162
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.32 E-value=5.6e-06 Score=70.01 Aligned_cols=91 Identities=14% Similarity=0.058 Sum_probs=61.3
Q ss_pred hhhHHHHHHHhhcCCCEEEeeccCCCCCCCC-----CCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHH
Q 024286 50 AIYDILCRRLVGTCKAVVVSVNYRRAPENRY-----PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHV 124 (269)
Q Consensus 50 ~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~ 124 (269)
..|..+++.|.+. ||.+ ..|.+++|-... ....+++.+.++.+.+. ...+ ++.|+||||||.+++.+
T Consensus 108 ~~~~~li~~L~~~-GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~-----~g~~-kV~LVGHSMGGlva~~f 179 (440)
T PLN02733 108 YYFHDMIEQLIKW-GYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKA-----SGGK-KVNIISHSMGGLLVKCF 179 (440)
T ss_pred HHHHHHHHHHHHc-CCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHH-----cCCC-CEEEEEECHhHHHHHHH
Confidence 4478889999987 9866 667776654311 12234555555555444 3445 89999999999999998
Q ss_pred HHHhhhc-cccccceeeeCCccCCC
Q 024286 125 ALRAVES-EVEILGNILLNPMFGGQ 148 (269)
Q Consensus 125 a~~~~~~-~~~~~~~i~~~p~~~~~ 148 (269)
+...++. ...++.+|++++.....
T Consensus 180 l~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 180 MSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HHHCCHhHHhHhccEEEECCCCCCC
Confidence 8876542 23478888887665443
No 163
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.30 E-value=1.1e-05 Score=68.61 Aligned_cols=166 Identities=16% Similarity=0.112 Sum_probs=92.0
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCC--CEEEeeccCCC-CCCCCCCchhhHHHHHHHHHhcccccC-CCCCc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCK--AVVVSVNYRRA-PENRYPCAYDDGWTVLKWAKSRSWLQS-KDSKA 107 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g--~~v~~~d~r~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~ 107 (269)
|+++++||++ ..+. .+..+..+-.++... | .-|..+|++.. ++..+....+-...+.+++..+. -+ ..-.
T Consensus 177 pl~i~aps~p-~ap~-tSd~~~~wqs~lsl~-gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei--~gefpha- 250 (784)
T KOG3253|consen 177 PLAIKAPSTP-LAPK-TSDRMWSWQSRLSLK-GEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEI--TGEFPHA- 250 (784)
T ss_pred ceEEeccCCC-CCCc-cchHHHhHHHHHhhh-ceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhh--hccCCCC-
Confidence 8999999977 2222 222233333344333 4 33556666632 22222222233333333332221 11 3444
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchHHHHHHHHHhCCCCCCCCCCCC
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQDRDWYWRAYLPEGANRDHPAC 187 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (269)
.|+|+|.|||+.++.++... +....|+++|++.=.++...... ..++.
T Consensus 251 ~IiLvGrsmGAlVachVSps--nsdv~V~~vVCigypl~~vdgpr---------------------------girDE--- 298 (784)
T KOG3253|consen 251 PIILVGRSMGALVACHVSPS--NSDVEVDAVVCIGYPLDTVDGPR---------------------------GIRDE--- 298 (784)
T ss_pred ceEEEecccCceeeEEeccc--cCCceEEEEEEecccccCCCccc---------------------------CCcch---
Confidence 89999999998888887754 22345888888853332221100 00000
Q ss_pred CCCCCCCCCccCCCCCceeEEecCCCcChhHH--HHHHHHHHHCCCCeEEEEeCCCceeeee
Q 024286 188 NPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGFYF 247 (269)
Q Consensus 188 ~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~H~~~~ 247 (269)
...+++ .|+|++.|..|..++.. +.+.++++ ..++++++.+++|.+-.
T Consensus 299 -----~Lldmk----~PVLFV~Gsnd~mcspn~ME~vreKMq---A~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 299 -----ALLDMK----QPVLFVIGSNDHMCSPNSMEEVREKMQ---AEVELHVIGGADHSMAI 348 (784)
T ss_pred -----hhHhcC----CceEEEecCCcccCCHHHHHHHHHHhh---ccceEEEecCCCccccC
Confidence 011122 39999999999988653 44444544 46789999999998754
No 164
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.17 E-value=7.6e-06 Score=63.05 Aligned_cols=92 Identities=17% Similarity=0.166 Sum_probs=49.8
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhh---cCC-CEEEeeccCCCCCCCCCCchhh-HHHHHHHHHhcccccCCCCC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVG---TCK-AVVVSVNYRRAPENRYPCAYDD-GWTVLKWAKSRSWLQSKDSK 106 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~---~~g-~~v~~~d~r~~~~~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~ 106 (269)
-+||++|| ..|+... |..+...|.. ... -.++..-+......+. ..++. ..+..+++.+..........
T Consensus 5 hLvV~vHG---L~G~~~d--~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~-~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 5 HLVVFVHG---LWGNPAD--MRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTF-DGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred EEEEEeCC---CCCCHHH--HHHHHHHHHHhhhhcchhhhhhhcccccccccc-hhhHHHHHHHHHHHHHhccccccccc
Confidence 69999999 4444333 5555555555 111 1222222222122222 22222 34455566555443333345
Q ss_pred ccEEEeecCchHHHHHHHHHHhhh
Q 024286 107 AHIYLAGDSSGGNIVHHVALRAVE 130 (269)
Q Consensus 107 ~~i~l~G~S~Gg~la~~~a~~~~~ 130 (269)
+|.++||||||.++-.++.....
T Consensus 79 -~IsfIgHSLGGli~r~al~~~~~ 101 (217)
T PF05057_consen 79 -KISFIGHSLGGLIARYALGLLHD 101 (217)
T ss_pred -cceEEEecccHHHHHHHHHHhhh
Confidence 89999999999999877665543
No 165
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.17 E-value=4.7e-06 Score=71.26 Aligned_cols=107 Identities=16% Similarity=0.144 Sum_probs=68.8
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC--------------CCCchhhHHHHHHHHHh
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR--------------YPCAYDDGWTVLKWAKS 96 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~--------------~~~~~~d~~~~~~~~~~ 96 (269)
.|++|++-|-+ -. .. ......+...||++.|-.++++++|..+++. ....+.|+...++++++
T Consensus 29 gpifl~~ggE~-~~-~~-~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~ 105 (434)
T PF05577_consen 29 GPIFLYIGGEG-PI-EP-FWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKK 105 (434)
T ss_dssp SEEEEEE--SS--H-HH-HHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCC-cc-ch-hhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHH
Confidence 38888885522 11 10 1112336778888889999999999876641 23456789999999986
Q ss_pred cccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 97 RSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 97 ~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
.... .+.. +++++|.|.||++|.++-.++|+. +.|.++.|+.+.
T Consensus 106 ~~~~--~~~~-pwI~~GgSY~G~Laaw~r~kyP~~---~~ga~ASSapv~ 149 (434)
T PF05577_consen 106 KYNT--APNS-PWIVFGGSYGGALAAWFRLKYPHL---FDGAWASSAPVQ 149 (434)
T ss_dssp HTTT--GCC---EEEEEETHHHHHHHHHHHH-TTT----SEEEEET--CC
T ss_pred hhcC--CCCC-CEEEECCcchhHHHHHHHhhCCCe---eEEEEeccceee
Confidence 5321 2445 899999999999999999999887 888888876653
No 166
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.08 E-value=6.3e-05 Score=55.92 Aligned_cols=129 Identities=16% Similarity=0.227 Sum_probs=71.5
Q ss_pred eeecCCCCCCCCCccccccccCC-CCCcccEEEEEcCCccccCC-----------CCchhhHHHHHHHhhcCCCEEEeec
Q 024286 4 RIYRPTNGEEHRPNIAELEKPVS-SEVVVPVIIFFHGGSFAHSS-----------ANSAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~p~~-~~~~~p~vv~~HGgg~~~~~-----------~~~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
|++-|-...+..+..+-+..+.. ...+ ..+|+|||.|.+..+ .+.....+++++--.. ||.|+..+
T Consensus 74 r~~ip~d~~e~E~~SFiF~s~~~lt~~~-kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~-Gygviv~N 151 (297)
T KOG3967|consen 74 RVSIPVDATESEPKSFIFMSEDALTNPQ-KLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAE-GYGVIVLN 151 (297)
T ss_pred eEeecCCCCCCCCcceEEEChhHhcCcc-ceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHc-CCcEEEeC
Confidence 34444444333344443333333 2333 599999998865321 0111112333443344 99999887
Q ss_pred cCCC---------CCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeee
Q 024286 72 YRRA---------PENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILL 141 (269)
Q Consensus 72 ~r~~---------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~ 141 (269)
--.. |.......++.+..+...+..- ..++ .++++.||.||.+++.+..+.+.. .++.++.+.
T Consensus 152 ~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~p-----a~~~-sv~vvahsyGG~~t~~l~~~f~~d-~~v~aialT 223 (297)
T KOG3967|consen 152 PNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLP-----AKAE-SVFVVAHSYGGSLTLDLVERFPDD-ESVFAIALT 223 (297)
T ss_pred CchhhhhhhcccCcchhccchHHHHHHHHHHHhcc-----cCcc-eEEEEEeccCChhHHHHHHhcCCc-cceEEEEee
Confidence 3310 1112223344444444444443 4667 999999999999999999887654 445555554
No 167
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.08 E-value=3.1e-05 Score=60.56 Aligned_cols=102 Identities=20% Similarity=0.103 Sum_probs=67.5
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC-CCCCchhhH-HHHHHHHHhcccccCCCCCccE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-RYPCAYDDG-WTVLKWAKSRSWLQSKDSKAHI 109 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~i 109 (269)
|+|+.+|+++. +.. .|..++..+.. -..|+.+++++.... .....+++. ...++-+.+ ..++.++
T Consensus 1 ~pLF~fhp~~G---~~~--~~~~L~~~l~~--~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~------~QP~GPy 67 (257)
T COG3319 1 PPLFCFHPAGG---SVL--AYAPLAAALGP--LLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRR------VQPEGPY 67 (257)
T ss_pred CCEEEEcCCCC---cHH--HHHHHHHHhcc--CceeeccccCcccccccccCCHHHHHHHHHHHHHH------hCCCCCE
Confidence 57899999432 221 15566666665 378999998876422 112223333 333333333 3455599
Q ss_pred EEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 110 YLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
.|.|+|+||.+|..+|.+....+..+..++++-+...
T Consensus 68 ~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 68 VLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred EEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999999999999998887777888877765554
No 168
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.07 E-value=0.0001 Score=57.79 Aligned_cols=60 Identities=17% Similarity=0.146 Sum_probs=51.0
Q ss_pred CceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHh
Q 024286 203 PKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFV 265 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl 265 (269)
+|-|.++++.|.+++. .+++++..++.|.+++...|++.+|+-+.-. +.+++.+.+.+|+
T Consensus 179 ~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~---~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 179 CPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRK---HPDRYWRAVDEFW 240 (240)
T ss_pred CCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhccc---CHHHHHHHHHhhC
Confidence 4899999999999875 4788888889999999999999999876543 5788998888874
No 169
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.05 E-value=0.00023 Score=53.40 Aligned_cols=107 Identities=17% Similarity=0.112 Sum_probs=72.8
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCC----CCCCCCCCchhhHHHHHHHHHhcccccCCCCCc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRR----APENRYPCAYDDGWTVLKWAKSRSWLQSKDSKA 107 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 107 (269)
-.|||+-|-| .|-..-..-..+...+-+. ++..+-+-.+. .+..+..+..+|+..+++++.... ..+
T Consensus 37 ~~vvfiGGLg--dgLl~~~y~~~L~~~lde~-~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~-----fSt- 107 (299)
T KOG4840|consen 37 VKVVFIGGLG--DGLLICLYTTMLNRYLDEN-SWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCG-----FST- 107 (299)
T ss_pred EEEEEEcccC--CCccccccHHHHHHHHhhc-cceeeeeeccccccccccccccccHHHHHHHHHHhhccC-----ccc-
Confidence 5677777622 1111111124444555555 99999888664 455667788899999999887652 334
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCC
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQ 148 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~ 148 (269)
+|+|+|||.|.-=.+++... ......+.++|+.+|+-+..
T Consensus 108 ~vVL~GhSTGcQdi~yYlTn-t~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 108 DVVLVGHSTGCQDIMYYLTN-TTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ceEEEecCccchHHHHHHHh-ccchHHHHHHHHhCccchhh
Confidence 89999999999888877733 23334589999999998755
No 170
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.95 E-value=5.8e-05 Score=60.83 Aligned_cols=106 Identities=15% Similarity=0.120 Sum_probs=63.8
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCE--EEeeccCCCCCC--------CCCCchhhHHHHHHHHHhccccc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAV--VVSVNYRRAPEN--------RYPCAYDDGWTVLKWAKSRSWLQ 101 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~--v~~~d~r~~~~~--------~~~~~~~d~~~~~~~~~~~~~~~ 101 (269)
-++||+||... ...+ .....++..... |+. .+.+..+..+.. .....-.++..++++|.+..
T Consensus 117 ~vlvFvHGfNn--tf~d--av~R~aqI~~d~-g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~--- 188 (377)
T COG4782 117 TVLVFVHGFNN--TFED--AVYRTAQIVHDS-GNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK--- 188 (377)
T ss_pred eEEEEEcccCC--chhH--HHHHHHHHHhhc-CCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC---
Confidence 69999999332 1111 123333333333 544 333333322211 11222356788888888873
Q ss_pred CCCCCccEEEeecCchHHHHHHHHHHhhhc-----cccccceeeeCCccCCC
Q 024286 102 SKDSKAHIYLAGDSSGGNIVHHVALRAVES-----EVEILGNILLNPMFGGQ 148 (269)
Q Consensus 102 ~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~-----~~~~~~~i~~~p~~~~~ 148 (269)
..+ +|.|++||||..+++....+..-+ ...++-+|+.+|=.+.+
T Consensus 189 --~~~-~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 189 --PVK-RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred --CCc-eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 345 899999999999999888776332 23478888888866544
No 171
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.94 E-value=0.00018 Score=56.70 Aligned_cols=218 Identities=17% Similarity=0.140 Sum_probs=110.6
Q ss_pred ccccccCCCCCcccEEEEEcCCccccCCCCchhh-HHHHHHHhhcCCCEEEeeccCCCCCC--CCC-----CchhhHHHH
Q 024286 19 AELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIY-DILCRRLVGTCKAVVVSVNYRRAPEN--RYP-----CAYDDGWTV 90 (269)
Q Consensus 19 ~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~-~~~~~~l~~~~g~~v~~~d~r~~~~~--~~~-----~~~~d~~~~ 90 (269)
+.++.-.+.+.++|++|=.|.=|-..-+.....+ .+-++.+.+ .+.++-+|.+++.+. .++ ..++++.+.
T Consensus 11 v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~--~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~ 88 (283)
T PF03096_consen 11 VHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ--NFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEM 88 (283)
T ss_dssp EEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT--TSEEEEEE-TTTSTT-----TT-----HHHHHCT
T ss_pred EEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh--ceEEEEEeCCCCCCCcccccccccccCHHHHHHH
Confidence 4444444433345999999984421111001111 122455554 799999999887542 222 224555555
Q ss_pred HHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCC------------------Cc
Q 024286 91 LKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQER------------------TE 152 (269)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~------------------~~ 152 (269)
+..+.+. ...+ .++-+|-.+|+++-..+|+++++. +.|+|+++|......- ++
T Consensus 89 l~~Vl~~-----f~lk-~vIg~GvGAGAnIL~rfAl~~p~~---V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~ 159 (283)
T PF03096_consen 89 LPEVLDH-----FGLK-SVIGFGVGAGANILARFALKHPER---VLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTS 159 (283)
T ss_dssp HHHHHHH-----HT----EEEEEETHHHHHHHHHHHHSGGG---EEEEEEES---S---HHHHHHHHHH-------CTTS
T ss_pred HHHHHHh-----CCcc-EEEEEeeccchhhhhhccccCccc---eeEEEEEecCCCCccHHHHHHHHHhccccccccccc
Confidence 5555554 2445 899999999999999999998887 9999999988643211 00
Q ss_pred hhhh------------hcCCc-----------ccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEe
Q 024286 153 SEKR------------LDGKY-----------FVTVQDRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVV 209 (269)
Q Consensus 153 ~~~~------------~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~ 209 (269)
.... ..+.+ ..+......++..|..... +....... .+|+|++.
T Consensus 160 ~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~D---------L~~~~~~~----~c~vLlvv 226 (283)
T PF03096_consen 160 SVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTD---------LSIERPSL----GCPVLLVV 226 (283)
T ss_dssp -HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT--------------SECTTC----CS-EEEEE
T ss_pred chHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccc---------chhhcCCC----CCCeEEEE
Confidence 0000 00000 0111122223333321000 00000111 35999999
Q ss_pred cCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhh
Q 024286 210 AGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 210 G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~ 266 (269)
|..-+....+..+..++.. .+.++...+++|=.. -.+++.++.+.+.=||+
T Consensus 227 G~~Sp~~~~vv~~ns~Ldp--~~ttllkv~dcGglV----~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 227 GDNSPHVDDVVEMNSKLDP--TKTTLLKVADCGGLV----LEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp ETTSTTHHHHHHHHHHS-C--CCEEEEEETT-TT-H----HHH-HHHHHHHHHHHHH
T ss_pred ecCCcchhhHHHHHhhcCc--ccceEEEecccCCcc----cccCcHHHHHHHHHHHc
Confidence 9999999887777777753 467899898875422 13457788888888876
No 172
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.93 E-value=0.0012 Score=54.43 Aligned_cols=239 Identities=13% Similarity=0.130 Sum_probs=126.1
Q ss_pred ceeecCCC-CCCCCCccccccccCC-CCCcccEEEEEcCCc---cccCCCCchhhHHHHHHHhhcCCCEEEeeccC----
Q 024286 3 PRIYRPTN-GEEHRPNIAELEKPVS-SEVVVPVIIFFHGGS---FAHSSANSAIYDILCRRLVGTCKAVVVSVNYR---- 73 (269)
Q Consensus 3 ~~~~~~~~-~~~~~~~~~~~~~p~~-~~~~~p~vv~~HGgg---~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r---- 73 (269)
.+-|.+.. ....+...+.|+.|.+ ...+ .+++++.||. +..... ......+..+|...|..|+.+..-
T Consensus 35 SQ~W~~~~v~~~~W~H~l~I~vP~~~~~~~-~all~i~gG~~~~~~~~~~--~~~~~~~~~~A~~t~siv~~l~qvPNQp 111 (367)
T PF10142_consen 35 SQQWLPESVDRPVWWHWLTIYVPKNDKNPD-TALLFITGGSNRNWPGPPP--DFDDELLQMIARATGSIVAILYQVPNQP 111 (367)
T ss_pred eeecCCCCCCcccCEEEEEEEECCCCCCCc-eEEEEEECCcccCCCCCCC--cchHHHHHHHHHhcCCEEEEeCcCCCCC
Confidence 34455554 2223556789999998 4444 8999999987 222222 224677889998878887765421
Q ss_pred C-C---CCCC--------------------CC---CchhhHHHHHHHHHhccccc-CCCCCccEEEeecCchHHHHHHHH
Q 024286 74 R-A---PENR--------------------YP---CAYDDGWTVLKWAKSRSWLQ-SKDSKAHIYLAGDSSGGNIVHHVA 125 (269)
Q Consensus 74 ~-~---~~~~--------------------~~---~~~~d~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~la~~~a 125 (269)
+ + +... .+ .....+.++++-+++..... +++.+ +++|.|.|==|..+..+|
T Consensus 112 l~f~~d~~~r~ED~iIAytW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~-~FvV~GaSKRGWTtWlta 190 (367)
T PF10142_consen 112 LTFDNDPKPRTEDAIIAYTWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIE-KFVVTGASKRGWTTWLTA 190 (367)
T ss_pred eEeCCCCccccHHHHHHHHHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCcc-EEEEeCCchHhHHHHHhh
Confidence 1 1 1100 00 11234455555555443332 36778 999999999999998888
Q ss_pred HHhhhccccccceeee-CCccCCCCCCchhhhhcC-CcccchHHHHHHHHHhCCCCCC-CC----CCCCCCCCCCCCCcc
Q 024286 126 LRAVESEVEILGNILL-NPMFGGQERTESEKRLDG-KYFVTVQDRDWYWRAYLPEGAN-RD----HPACNPFGPKGIDLV 198 (269)
Q Consensus 126 ~~~~~~~~~~~~~i~~-~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~ 198 (269)
+- . .+|++++-+ .++++...........-+ ... ..+..+...-+....+ .. .....|+. ..+.+.
T Consensus 191 a~-D---~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws---~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~-Y~~rL~ 262 (367)
T PF10142_consen 191 AV-D---PRVKAIVPIVIDVLNMKANLEHQYRSYGGNWS---FAFQDYYNEGITQQLDTPEFDKLMQIVDPYS-YRDRLT 262 (367)
T ss_pred cc-C---cceeEEeeEEEccCCcHHHHHHHHHHhCCCCc---cchhhhhHhCchhhcCCHHHHHHHHhcCHHH-HHHhcC
Confidence 72 2 336655544 244443322222111111 100 0000111100000000 00 00000100 001112
Q ss_pred CCCCCceeEEecCCCcC-hhH-HHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 199 GVKFPKSLVVVAGLDLI-QDW-QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 199 ~~~~~P~li~~G~~D~~-~~~-~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
.|.+|+.|..|++ +++ +.-+...|+ .+..++.+|+++|+.. ..+.++.+..|+..
T Consensus 263 ----~PK~ii~atgDeFf~pD~~~~y~d~L~---G~K~lr~vPN~~H~~~-------~~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 263 ----MPKYIINATGDEFFVPDSSNFYYDKLP---GEKYLRYVPNAGHSLI-------GSDVVQSLRAFYNR 319 (367)
T ss_pred ----ccEEEEecCCCceeccCchHHHHhhCC---CCeeEEeCCCCCcccc-------hHHHHHHHHHHHHH
Confidence 2889999998876 444 455555555 3668999999999763 26677778888764
No 173
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.92 E-value=3.6e-05 Score=55.12 Aligned_cols=131 Identities=12% Similarity=0.072 Sum_probs=82.9
Q ss_pred HHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCCchhhhhcCCcccchH
Q 024286 87 GWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERTESEKRLDGKYFVTVQ 166 (269)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (269)
-.+.-+|+.++. -+- +..+-|.||||+.|+.+-.+.|+- +.++|++|+..+..+... .......
T Consensus 87 H~AyerYv~eEa-----lpg-s~~~sgcsmGayhA~nfvfrhP~l---ftkvialSGvYdardffg-------~yyddDv 150 (227)
T COG4947 87 HRAYERYVIEEA-----LPG-STIVSGCSMGAYHAANFVFRHPHL---FTKVIALSGVYDARDFFG-------GYYDDDV 150 (227)
T ss_pred HHHHHHHHHHhh-----cCC-CccccccchhhhhhhhhheeChhH---hhhheeecceeeHHHhcc-------ccccCce
Confidence 344567887774 334 788899999999999999988876 899999999886542111 1100000
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCCCCccCCCCCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeee
Q 024286 167 DRDWYWRAYLPEGANRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFY 246 (269)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~ 246 (269)
... .-..|+++... + ..++.++...++++.|.+|+..+..+.+.+.+.....+..+.++.|..|.+.
T Consensus 151 ~yn-sP~dylpg~~d-------p-----~~l~rlr~~~~vfc~G~e~~~L~~~~~L~~~l~dKqipaw~~~WggvaHdw~ 217 (227)
T COG4947 151 YYN-SPSDYLPGLAD-------P-----FRLERLRRIDMVFCIGDEDPFLDNNQHLSRLLSDKQIPAWMHVWGGVAHDWG 217 (227)
T ss_pred eec-ChhhhccCCcC-------h-----HHHHHHhhccEEEEecCccccccchHHHHHHhccccccHHHHHhcccccccH
Confidence 000 00011111000 0 0001111226899999999999888888888888888888888888888653
No 174
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.83 E-value=4.4e-05 Score=67.07 Aligned_cols=77 Identities=14% Similarity=0.063 Sum_probs=47.9
Q ss_pred CEEEeeccCC----CCCCCCCCchhhHHHHHHHHHhcccc-cCCC---CCccEEEeecCchHHHHHHHHHHhhhcccccc
Q 024286 65 AVVVSVNYRR----APENRYPCAYDDGWTVLKWAKSRSWL-QSKD---SKAHIYLAGDSSGGNIVHHVALRAVESEVEIL 136 (269)
Q Consensus 65 ~~v~~~d~r~----~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~---~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~ 136 (269)
+..+++|+-. .-+....++.+-+.++++++.+.... ...+ |. .++|+||||||.+|..++.........+.
T Consensus 133 ~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~-sVILVGHSMGGiVAra~~tlkn~~~~sVn 211 (973)
T KOG3724|consen 133 FDFFAVDFNEEFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPH-SVILVGHSMGGIVARATLTLKNEVQGSVN 211 (973)
T ss_pred cceEEEcccchhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCc-eEEEEeccchhHHHHHHHhhhhhccchhh
Confidence 4566666442 11223445566678888888765432 1123 66 79999999999999888776544444455
Q ss_pred ceeeeC
Q 024286 137 GNILLN 142 (269)
Q Consensus 137 ~~i~~~ 142 (269)
-++..+
T Consensus 212 tIITls 217 (973)
T KOG3724|consen 212 TIITLS 217 (973)
T ss_pred hhhhhc
Confidence 555443
No 175
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.82 E-value=0.00026 Score=60.87 Aligned_cols=121 Identities=17% Similarity=0.193 Sum_probs=69.1
Q ss_pred cccccCCCCCcccEEEEEcCCccccCCCCchhhHHHH------------------HHHhhcCCCEEEeeccC-CCCCCC-
Q 024286 20 ELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILC------------------RRLVGTCKAVVVSVNYR-RAPENR- 79 (269)
Q Consensus 20 ~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~------------------~~l~~~~g~~v~~~d~r-~~~~~~- 79 (269)
.++..++...+.|+|+|++||....+ . ...+. ..|.+ -..++.+|.+ +.+.+.
T Consensus 66 w~~~s~~~~~~~Pl~lwlnGGPG~ss---~--~G~f~E~GP~~i~~~~~~~~~n~~sW~~--~~~~l~iDqP~G~G~S~~ 138 (462)
T PTZ00472 66 WAFGPRNGNPEAPVLLWMTGGPGCSS---M--FALLAENGPCLMNETTGDIYNNTYSWNN--EAYVIYVDQPAGVGFSYA 138 (462)
T ss_pred EEEEcCCCCCCCCEEEEECCCCcHHH---H--HhhhccCCCeEEeCCCCceeECCccccc--ccCeEEEeCCCCcCcccC
Confidence 44444555556699999999753211 0 11110 01111 2457777765 333221
Q ss_pred ----CC----CchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhh-------ccccccceeeeCCc
Q 024286 80 ----YP----CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE-------SEVEILGNILLNPM 144 (269)
Q Consensus 80 ----~~----~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~-------~~~~~~~~i~~~p~ 144 (269)
.. ...+|+.++++...++... .... +++|+|+|+||..+-.+|.+..+ ....++|+++.+|+
T Consensus 139 ~~~~~~~~~~~~a~d~~~~l~~f~~~~p~--~~~~-~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 139 DKADYDHNESEVSEDMYNFLQAFFGSHED--LRAN-DLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhCcc--ccCC-CEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccc
Confidence 11 1234454444433332111 3446 99999999999999888877532 12568999999999
Q ss_pred cCCCCC
Q 024286 145 FGGQER 150 (269)
Q Consensus 145 ~~~~~~ 150 (269)
++....
T Consensus 216 ~dp~~q 221 (462)
T PTZ00472 216 TDPYTQ 221 (462)
T ss_pred cChhhh
Confidence 876533
No 176
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.80 E-value=0.00016 Score=70.39 Aligned_cols=100 Identities=20% Similarity=0.163 Sum_probs=66.0
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC-CCCchhhHHHHH-HHHHhcccccCCCCCccE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-YPCAYDDGWTVL-KWAKSRSWLQSKDSKAHI 109 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-~~~~~~d~~~~~-~~~~~~~~~~~~~~~~~i 109 (269)
|.++++||.+. +. ..|..+++.|.. ++.|+.++.++.+... ....++++.+.+ ..+.+. .... ++
T Consensus 1069 ~~l~~lh~~~g---~~--~~~~~l~~~l~~--~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~-----~~~~-p~ 1135 (1296)
T PRK10252 1069 PTLFCFHPASG---FA--WQFSVLSRYLDP--QWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQ-----QPHG-PY 1135 (1296)
T ss_pred CCeEEecCCCC---ch--HHHHHHHHhcCC--CCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhh-----CCCC-CE
Confidence 67899999542 22 237777777754 7999999988765331 122333333332 222221 1224 79
Q ss_pred EEeecCchHHHHHHHHHHhhhccccccceeeeCCc
Q 024286 110 YLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 144 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~ 144 (269)
.++||||||.+|..+|.+....+..+..++++.+.
T Consensus 1136 ~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1136 HLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 99999999999999999876655668888877654
No 177
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.77 E-value=8e-05 Score=62.60 Aligned_cols=88 Identities=17% Similarity=0.193 Sum_probs=60.5
Q ss_pred hhHHHHHHHhhcCCCE------EEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHH
Q 024286 51 IYDILCRRLVGTCKAV------VVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHV 124 (269)
Q Consensus 51 ~~~~~~~~l~~~~g~~------v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~ 124 (269)
.|..+++.|.+. ||. ..-+|.|.++. ........+...++.+.+. ..+ +++|+||||||.++..+
T Consensus 66 ~~~~li~~L~~~-GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~------~~~-kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKL-GYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKK------NGK-KVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhc-CcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHh------cCC-cEEEEEeCCCchHHHHH
Confidence 378889999875 776 23379998776 1222334455555554443 345 99999999999999998
Q ss_pred HHHhhhc---cccccceeeeCCccCC
Q 024286 125 ALRAVES---EVEILGNILLNPMFGG 147 (269)
Q Consensus 125 a~~~~~~---~~~~~~~i~~~p~~~~ 147 (269)
+...... ...|++.|.+++....
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCC
Confidence 8876432 3458999999876543
No 178
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.69 E-value=0.00024 Score=57.16 Aligned_cols=64 Identities=16% Similarity=0.158 Sum_probs=46.0
Q ss_pred CceeEEecCCCcChhH--HHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcCC
Q 024286 203 PKSLVVVAGLDLIQDW--QLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY 269 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~~ 269 (269)
.|+|++||..|.+++. +..+.+..+.. +.+...+++++|..... ..+...+.++++.+|+.+++
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~-~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYD-NPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccC-ccHHHHHHHHHHHHHHHHhc
Confidence 4999999999999875 34444444433 56888888999975432 23344689999999998764
No 179
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.63 E-value=0.00095 Score=54.69 Aligned_cols=77 Identities=23% Similarity=0.344 Sum_probs=53.8
Q ss_pred cEEEEEcC-CccccCCCCchhhHHHHHHHhhcCCCEEEeec-cCCCCCCCCC-CchhhHHHHHHHHHhcccccCCCCCcc
Q 024286 32 PVIIFFHG-GSFAHSSANSAIYDILCRRLVGTCKAVVVSVN-YRRAPENRYP-CAYDDGWTVLKWAKSRSWLQSKDSKAH 108 (269)
Q Consensus 32 p~vv~~HG-gg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d-~r~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~ 108 (269)
-+-||+-| |||- +. =......|.+. |+.|+.+| .|.+-...-| ....|+.+.+++-.++ ...+ +
T Consensus 261 ~~av~~SGDGGWr----~l--Dk~v~~~l~~~-gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~-----w~~~-~ 327 (456)
T COG3946 261 TVAVFYSGDGGWR----DL--DKEVAEALQKQ-GVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARR-----WGAK-R 327 (456)
T ss_pred eEEEEEecCCchh----hh--hHHHHHHHHHC-CCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHh-----hCcc-e
Confidence 34566666 7763 11 15667778877 99999999 5544333333 3457888888887775 5667 9
Q ss_pred EEEeecCchHHHH
Q 024286 109 IYLAGDSSGGNIV 121 (269)
Q Consensus 109 i~l~G~S~Gg~la 121 (269)
+.|+|+|.|+=+-
T Consensus 328 ~~liGySfGADvl 340 (456)
T COG3946 328 VLLIGYSFGADVL 340 (456)
T ss_pred EEEEeecccchhh
Confidence 9999999999654
No 180
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.58 E-value=0.00039 Score=55.68 Aligned_cols=75 Identities=20% Similarity=0.114 Sum_probs=58.5
Q ss_pred CCEEEeeccCCCCCCC---CCCc-hhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhcccccccee
Q 024286 64 KAVVVSVNYRRAPENR---YPCA-YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNI 139 (269)
Q Consensus 64 g~~v~~~d~r~~~~~~---~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i 139 (269)
||.|+..+++++.+++ ++.. ...+..++++..+... ...+ .|+|.|+|-||+-++++|+.+++ ++++|
T Consensus 268 gYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lg---f~~e-dIilygWSIGGF~~~waAs~YPd----Vkavv 339 (517)
T KOG1553|consen 268 GYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLG---FRQE-DIILYGWSIGGFPVAWAASNYPD----VKAVV 339 (517)
T ss_pred CceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcC---CCcc-ceEEEEeecCCchHHHHhhcCCC----ceEEE
Confidence 9999999999887663 4432 2334556677766544 7788 99999999999999999998876 89999
Q ss_pred eeCCccC
Q 024286 140 LLNPMFG 146 (269)
Q Consensus 140 ~~~p~~~ 146 (269)
+-+.+-+
T Consensus 340 LDAtFDD 346 (517)
T KOG1553|consen 340 LDATFDD 346 (517)
T ss_pred eecchhh
Confidence 9887643
No 181
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.57 E-value=0.00023 Score=58.60 Aligned_cols=104 Identities=15% Similarity=0.055 Sum_probs=65.1
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCE---EEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCcc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAV---VVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAH 108 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~---v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 108 (269)
-.++++||.+. +... +..+...+... |+. +..+++... ...............++.+..... ..+ +
T Consensus 60 ~pivlVhG~~~---~~~~--~~~~~~~~~~~-g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~--ga~-~ 128 (336)
T COG1075 60 EPIVLVHGLGG---GYGN--FLPLDYRLAIL-GWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKT--GAK-K 128 (336)
T ss_pred ceEEEEccCcC---Ccch--hhhhhhhhcch-HHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhc--CCC-c
Confidence 37999999543 2222 45555555555 776 888877744 222223344555555665554432 335 8
Q ss_pred EEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCC
Q 024286 109 IYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGG 147 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~ 147 (269)
+.|+||||||.++.+++...+. ...++.++.+++.-..
T Consensus 129 v~LigHS~GG~~~ry~~~~~~~-~~~V~~~~tl~tp~~G 166 (336)
T COG1075 129 VNLIGHSMGGLDSRYYLGVLGG-ANRVASVVTLGTPHHG 166 (336)
T ss_pred eEEEeecccchhhHHHHhhcCc-cceEEEEEEeccCCCC
Confidence 9999999999999988776542 2457888887765433
No 182
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=97.54 E-value=0.021 Score=45.17 Aligned_cols=117 Identities=20% Similarity=0.181 Sum_probs=74.1
Q ss_pred ccccccCCCCCcccEEEEEcCCccccCCCCchhh-HHHHHHHhhcCCCEEEeeccCCCCCC--CCC-----CchhhHHHH
Q 024286 19 AELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIY-DILCRRLVGTCKAVVVSVNYRRAPEN--RYP-----CAYDDGWTV 90 (269)
Q Consensus 19 ~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~-~~~~~~l~~~~g~~v~~~d~r~~~~~--~~~-----~~~~d~~~~ 90 (269)
+.++.--+.+.++|++|-.|.=|-...+.....+ .+-++.+.. .+.|+-+|-+++.+. .++ ...+++.+.
T Consensus 34 v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~--~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~ 111 (326)
T KOG2931|consen 34 VHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE--HFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADM 111 (326)
T ss_pred EEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh--heEEEecCCCccccCCccCCCCCCCCCHHHHHHH
Confidence 3444433333334899999995532222111101 122445555 488888887765322 122 224566666
Q ss_pred HHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 91 LKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
+-.+.+. ...+ .++-+|--+|++|-.++|+.+++. |-|+|++++-..
T Consensus 112 l~~VL~~-----f~lk-~vIg~GvGAGAyIL~rFAl~hp~r---V~GLvLIn~~~~ 158 (326)
T KOG2931|consen 112 LPEVLDH-----FGLK-SVIGMGVGAGAYILARFALNHPER---VLGLVLINCDPC 158 (326)
T ss_pred HHHHHHh-----cCcc-eEEEecccccHHHHHHHHhcChhh---eeEEEEEecCCC
Confidence 6666665 4556 899999999999999999998887 999999997653
No 183
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.43 E-value=0.00044 Score=49.29 Aligned_cols=40 Identities=18% Similarity=0.207 Sum_probs=27.3
Q ss_pred CCccEEEeecCchHHHHHHHHHHhhhcc----ccccceeeeCCcc
Q 024286 105 SKAHIYLAGDSSGGNIVHHVALRAVESE----VEILGNILLNPMF 145 (269)
Q Consensus 105 ~~~~i~l~G~S~Gg~la~~~a~~~~~~~----~~~~~~i~~~p~~ 145 (269)
.. +|.+.|||+||.+|..+++...... ..+..+..-+|-+
T Consensus 63 ~~-~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 63 DY-SIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp TS-EEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred Cc-cchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 35 8999999999999999999875543 2344444444543
No 184
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=97.41 E-value=0.01 Score=50.18 Aligned_cols=117 Identities=11% Similarity=0.034 Sum_probs=73.0
Q ss_pred ccccccCCCCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEe-eccCCCCCCCCCCchhhHHH-HHHHHHh
Q 024286 19 AELEKPVSSEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVS-VNYRRAPENRYPCAYDDGWT-VLKWAKS 96 (269)
Q Consensus 19 ~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~-~d~r~~~~~~~~~~~~d~~~-~~~~~~~ 96 (269)
+--|..++.-++ |..||+-| + ... +.|+.+ .+-++.|+..+. -|-|+-+.+ +.-..++..+ .++-+++
T Consensus 278 i~yYFnPGD~KP-PL~VYFSG--y-R~a---EGFEgy--~MMk~Lg~PfLL~~DpRleGGa-FYlGs~eyE~~I~~~I~~ 347 (511)
T TIGR03712 278 FIYYFNPGDFKP-PLNVYFSG--Y-RPA---EGFEGY--FMMKRLGAPFLLIGDPRLEGGA-FYLGSDEYEQGIINVIQE 347 (511)
T ss_pred eEEecCCcCCCC-CeEEeecc--C-ccc---CcchhH--HHHHhcCCCeEEeeccccccce-eeeCcHHHHHHHHHHHHH
Confidence 444444444455 89999999 2 111 113222 222333666544 466765444 4444444433 3344455
Q ss_pred cccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCCCC
Q 024286 97 RSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQERT 151 (269)
Q Consensus 97 ~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~~~ 151 (269)
....++.+.+ .++|.|-|||.+-|++++++. .+.++|+.-|.++....+
T Consensus 348 ~L~~LgF~~~-qLILSGlSMGTfgAlYYga~l-----~P~AIiVgKPL~NLGtiA 396 (511)
T TIGR03712 348 KLDYLGFDHD-QLILSGLSMGTFGALYYGAKL-----SPHAIIVGKPLVNLGTIA 396 (511)
T ss_pred HHHHhCCCHH-HeeeccccccchhhhhhcccC-----CCceEEEcCcccchhhhh
Confidence 5555668888 999999999999999999864 478888888998765443
No 185
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.36 E-value=0.00045 Score=52.05 Aligned_cols=60 Identities=20% Similarity=0.257 Sum_probs=43.9
Q ss_pred CCEEEeeccCCCCCCC------------CCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHh
Q 024286 64 KAVVVSVNYRRAPENR------------YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 64 g~~v~~~d~r~~~~~~------------~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
-+.|++|-||-..-.. ..-...|+.++.++-.++.. +.. +++|+|||.|+.+.+.++...
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n----~GR-PfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN----NGR-PFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC----CCC-CEEEEEeChHHHHHHHHHHHH
Confidence 4789999999432111 11235789888888877732 334 999999999999999998765
No 186
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.25 E-value=0.0006 Score=55.96 Aligned_cols=90 Identities=18% Similarity=0.090 Sum_probs=65.4
Q ss_pred HHHHHHhhcCCCEEEeeccCCCCCC-----------------CCCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCc
Q 024286 54 ILCRRLVGTCKAVVVSVNYRRAPEN-----------------RYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSS 116 (269)
Q Consensus 54 ~~~~~l~~~~g~~v~~~d~r~~~~~-----------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~ 116 (269)
.++..+|.+.+..++..++|..+++ +.++.+.|-...++.+++... .... +++.+|.|.
T Consensus 101 GFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~---a~~~-pvIafGGSY 176 (492)
T KOG2183|consen 101 GFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLS---AEAS-PVIAFGGSY 176 (492)
T ss_pred chHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccc---cccC-cEEEecCch
Confidence 3455667776888999999966543 123456788888888888733 4556 899999999
Q ss_pred hHHHHHHHHHHhhhccccccceeeeCCccCCCC
Q 024286 117 GGNIVHHVALRAVESEVEILGNILLNPMFGGQE 149 (269)
Q Consensus 117 Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~ 149 (269)
||++|.++=+++|.- .+.++.+.+|++...+
T Consensus 177 GGMLaAWfRlKYPHi--v~GAlAaSAPvl~f~d 207 (492)
T KOG2183|consen 177 GGMLAAWFRLKYPHI--VLGALAASAPVLYFED 207 (492)
T ss_pred hhHHHHHHHhcChhh--hhhhhhccCceEeecC
Confidence 999999999999875 2344455567765443
No 187
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.25 E-value=0.0011 Score=48.03 Aligned_cols=41 Identities=17% Similarity=0.167 Sum_probs=29.4
Q ss_pred CCCccEEEeecCchHHHHHHHHHHhhhc-cccccceeeeCCcc
Q 024286 104 DSKAHIYLAGDSSGGNIVHHVALRAVES-EVEILGNILLNPMF 145 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg~la~~~a~~~~~~-~~~~~~~i~~~p~~ 145 (269)
... +|.+.|||+||.+|..++...... ......++.+.|..
T Consensus 26 p~~-~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 26 PDY-KIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred CCC-eEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 445 999999999999999999887553 12344556665543
No 188
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.21 E-value=0.0052 Score=47.74 Aligned_cols=100 Identities=16% Similarity=0.082 Sum_probs=66.2
Q ss_pred EEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCC-CCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEE
Q 024286 33 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRA-PENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 111 (269)
Q Consensus 33 ~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l 111 (269)
.+|++||=| .+..+..+..+.+.+.+.-|..|.++|.--. ..+.+....+.+..+++.++.-.. -++ -+.+
T Consensus 25 P~ii~HGig---d~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~~m~~----lsq-Gyni 96 (296)
T KOG2541|consen 25 PVIVWHGIG---DSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVKQMPE----LSQ-GYNI 96 (296)
T ss_pred CEEEEeccC---cccccchHHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHhcchh----ccC-ceEE
Confidence 466789932 2333334677777777766999999996543 123334445566666666664322 334 7999
Q ss_pred eecCchHHHHHHHHHHhhhccccccceeeeC
Q 024286 112 AGDSSGGNIVHHVALRAVESEVEILGNILLN 142 (269)
Q Consensus 112 ~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~ 142 (269)
+|.|.||.+|-.++...++ ..+...|.++
T Consensus 97 vg~SQGglv~Raliq~cd~--ppV~n~ISL~ 125 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDN--PPVKNFISLG 125 (296)
T ss_pred EEEccccHHHHHHHHhCCC--CCcceeEecc
Confidence 9999999999999988765 4566666554
No 189
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.17 E-value=0.0054 Score=46.54 Aligned_cols=85 Identities=22% Similarity=0.241 Sum_probs=55.1
Q ss_pred hHHHHHHHhhcCCCEEEeeccCCCCCC-CCCCchhhHHH-HHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhh
Q 024286 52 YDILCRRLVGTCKAVVVSVNYRRAPEN-RYPCAYDDGWT-VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAV 129 (269)
Q Consensus 52 ~~~~~~~l~~~~g~~v~~~d~r~~~~~-~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~ 129 (269)
|..+...+.. .+.|+.+++++.... ......++..+ ....+.+. .... ++.++|||+||.++..++.+..
T Consensus 15 ~~~~~~~l~~--~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~-~~~l~g~s~Gg~~a~~~a~~l~ 86 (212)
T smart00824 15 YARLAAALRG--RRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRA-----AGGR-PFVLVGHSSGGLLAHAVAARLE 86 (212)
T ss_pred HHHHHHhcCC--CccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----cCCC-CeEEEEECHHHHHHHHHHHHHH
Confidence 6677777764 688999998866432 22222333222 23333332 2334 8999999999999999998876
Q ss_pred hccccccceeeeCCc
Q 024286 130 ESEVEILGNILLNPM 144 (269)
Q Consensus 130 ~~~~~~~~~i~~~p~ 144 (269)
..+..+.+++++.+.
T Consensus 87 ~~~~~~~~l~~~~~~ 101 (212)
T smart00824 87 ARGIPPAAVVLLDTY 101 (212)
T ss_pred hCCCCCcEEEEEccC
Confidence 555567788777543
No 190
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.09 E-value=0.0018 Score=56.16 Aligned_cols=87 Identities=11% Similarity=0.079 Sum_probs=55.7
Q ss_pred hHHHHHHHhhcCCCE-----EEeeccCCCCCCC--CCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHH
Q 024286 52 YDILCRRLVGTCKAV-----VVSVNYRRAPENR--YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHV 124 (269)
Q Consensus 52 ~~~~~~~l~~~~g~~-----v~~~d~r~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~ 124 (269)
|..+++.|+.. ||. ...+|+|+++... .......+...++.+.+. .+.+ +++|+||||||.+++.+
T Consensus 158 w~kLIe~L~~i-GY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~-----nggk-KVVLV~HSMGglv~lyF 230 (642)
T PLN02517 158 WAVLIANLARI-GYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVAT-----NGGK-KVVVVPHSMGVLYFLHF 230 (642)
T ss_pred HHHHHHHHHHc-CCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHH-----cCCC-eEEEEEeCCchHHHHHH
Confidence 47888899876 886 5566777654321 112234455555555443 2345 89999999999999998
Q ss_pred HHHhhh------------ccccccceeeeCCcc
Q 024286 125 ALRAVE------------SEVEILGNILLNPMF 145 (269)
Q Consensus 125 a~~~~~------------~~~~~~~~i~~~p~~ 145 (269)
...... ....|+..|.++|.+
T Consensus 231 L~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 231 MKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 764310 113478888887654
No 191
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.06 E-value=0.0013 Score=50.83 Aligned_cols=54 Identities=22% Similarity=0.282 Sum_probs=37.7
Q ss_pred hHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhc-cccccceeeeCC
Q 024286 86 DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES-EVEILGNILLNP 143 (269)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~-~~~~~~~i~~~p 143 (269)
....|++++.+... ..+. ++.+.|||.||++|...++...+. ..++..+..+.+
T Consensus 67 ~q~~A~~yl~~~~~---~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 67 QQKSALAYLKKIAK---KYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHHHH---hCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 33566666665543 2345 799999999999999999885443 235777776654
No 192
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.05 E-value=0.0016 Score=50.69 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=27.9
Q ss_pred cEEEeecCchHHHHHHHHHHhhhc--cccccceeeeCCcc
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVES--EVEILGNILLNPMF 145 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~--~~~~~~~i~~~p~~ 145 (269)
++.+.|||+||.+|..++...... ...+.++...+|-+
T Consensus 129 ~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 129 KIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred eEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 899999999999999999876543 23455555555544
No 193
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.02 E-value=0.021 Score=44.06 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=60.6
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCC--CEEEeeccCCC---CCC-------CCC---CchhhHHHHHHHHH
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCK--AVVVSVNYRRA---PEN-------RYP---CAYDDGWTVLKWAK 95 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g--~~v~~~d~r~~---~~~-------~~~---~~~~d~~~~~~~~~ 95 (269)
.+.|+++.|... ....+.++++.|-...+ ..|..+..-++ |.+ +.. .-.+.+.-=+++++
T Consensus 29 ~~li~~IpGNPG-----~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 29 KPLIVWIPGNPG-----LLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIK 103 (301)
T ss_pred ceEEEEecCCCC-----chhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHH
Confidence 389999999432 22337888888877544 23444433222 211 100 11123444555666
Q ss_pred hcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 96 SRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 96 ~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
+.. .... ++.|+|||-|+++.+.++... ....++..++++-|-+
T Consensus 104 ~~~----Pk~~-ki~iiGHSiGaYm~Lqil~~~-k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 104 EYV----PKDR-KIYIIGHSIGAYMVLQILPSI-KLVFSVQKAVLLFPTI 147 (301)
T ss_pred HhC----CCCC-EEEEEecchhHHHHHHHhhhc-ccccceEEEEEecchH
Confidence 552 2344 999999999999999998752 2234566666655543
No 194
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.95 E-value=0.0045 Score=46.11 Aligned_cols=103 Identities=17% Similarity=0.149 Sum_probs=52.0
Q ss_pred EEEEEcCCccccCCCCchhhHHHHHHHhhcCC---CEEEeeccCCCCCC-CCC----CchhhHHHHHHHHHhcccccCCC
Q 024286 33 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCK---AVVVSVNYRRAPEN-RYP----CAYDDGWTVLKWAKSRSWLQSKD 104 (269)
Q Consensus 33 ~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g---~~v~~~d~r~~~~~-~~~----~~~~d~~~~~~~~~~~~~~~~~~ 104 (269)
.||+..|.+...+.... -..+.+.+....| ..+..++|+-.... .+. ....++.+.++....+ +.
T Consensus 7 ~vi~aRGT~E~~g~~~~--g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~-----CP 79 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRV--GPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAAR-----CP 79 (179)
T ss_dssp EEEEE--TTSSTTTCCC--HHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHH-----ST
T ss_pred EEEEecCCCCCCCCccc--cHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHh-----CC
Confidence 46666774443222111 1233344444334 55666778854443 222 2233444444433333 34
Q ss_pred CCccEEEeecCchHHHHHHHHHH--h-hhccccccceeeeCC
Q 024286 105 SKAHIYLAGDSSGGNIVHHVALR--A-VESEVEILGNILLNP 143 (269)
Q Consensus 105 ~~~~i~l~G~S~Gg~la~~~a~~--~-~~~~~~~~~~i~~~p 143 (269)
.. +|+|+|+|.|+.++..++.. . .....++.+++++.-
T Consensus 80 ~~-kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGd 120 (179)
T PF01083_consen 80 NT-KIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGD 120 (179)
T ss_dssp TS-EEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-
T ss_pred CC-CEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecC
Confidence 45 99999999999999998876 1 112244888888863
No 195
>PLN02454 triacylglycerol lipase
Probab=96.81 E-value=0.0034 Score=52.40 Aligned_cols=56 Identities=21% Similarity=0.229 Sum_probs=33.5
Q ss_pred hHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccc-----cccceeeeCCcc
Q 024286 86 DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEV-----EILGNILLNPMF 145 (269)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~-----~~~~~i~~~p~~ 145 (269)
++...++.+.+... -..- +|++.|||+||.||+..|........ .+..+..-+|-+
T Consensus 211 qvl~~V~~l~~~Yp---~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 211 QLLAKIKELLERYK---DEKL-SIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred HHHHHHHHHHHhCC---CCCc-eEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 44455555554421 1112 59999999999999999977543321 244444445554
No 196
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.75 E-value=0.0054 Score=52.23 Aligned_cols=62 Identities=18% Similarity=0.229 Sum_probs=41.4
Q ss_pred hhHHHHHHHHHhcccccC-CCCCccEEEeecCchHHHHHHHHHHhhhc-------cccccceeeeCCccCC
Q 024286 85 DDGWTVLKWAKSRSWLQS-KDSKAHIYLAGDSSGGNIVHHVALRAVES-------EVEILGNILLNPMFGG 147 (269)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~la~~~a~~~~~~-------~~~~~~~i~~~p~~~~ 147 (269)
+++.+..++|.+...... .... ++.|.|-|+||..+-.+|....+. ...++|+++.+|+++.
T Consensus 114 ~~a~~~~~fl~~f~~~~p~~~~~-~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 114 QAAEDLYEFLQQFFQKFPEYRSN-PLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHHHHSGGGTTS-EEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHHHHhhhhhhhccCC-CEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 344455555544333322 5566 999999999999887776665332 3678999999999854
No 197
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.71 E-value=0.0076 Score=40.42 Aligned_cols=60 Identities=15% Similarity=0.159 Sum_probs=40.6
Q ss_pred CCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 202 FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 202 ~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
.+|+|++.++.|+..|.. .++++.+.-...+++..++.||+.... . ..-+.+.+.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~--~a~~~~~~l~~s~lvt~~g~gHg~~~~-~---s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYE--GARAMAARLPGSRLVTVDGAGHGVYAG-G---SPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHH--HHHHHHHHCCCceEEEEeccCcceecC-C---ChHHHHHHHHHHHc
Confidence 359999999999998853 223333333346999999999997642 2 23355566777753
No 198
>PLN02606 palmitoyl-protein thioesterase
Probab=96.66 E-value=0.027 Score=45.08 Aligned_cols=105 Identities=10% Similarity=0.023 Sum_probs=61.7
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCC-CCchhhHHHHHHHHHhcccccCCCCCccEE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY-PCAYDDGWTVLKWAKSRSWLQSKDSKAHIY 110 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~ 110 (269)
-.||++||-|=. .....+..+.+.+...-|.-+.++..-..-..++ ....+.+..+++.+.+-.. -.+ -+.
T Consensus 27 ~PvViwHGlgD~---~~~~~~~~~~~~i~~~~~~pg~~v~ig~~~~~s~~~~~~~Qv~~vce~l~~~~~----L~~-G~n 98 (306)
T PLN02606 27 VPFVLFHGFGGE---CSNGKVSNLTQFLINHSGYPGTCVEIGNGVQDSLFMPLRQQASIACEKIKQMKE----LSE-GYN 98 (306)
T ss_pred CCEEEECCCCcc---cCCchHHHHHHHHHhCCCCCeEEEEECCCcccccccCHHHHHHHHHHHHhcchh----hcC-ceE
Confidence 357788994411 1112356666666422255444443111111222 4445666777777766322 234 699
Q ss_pred EeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 111 LAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 111 l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
++|+|.||.++-.++.+.+. ...++-.|.+++.-
T Consensus 99 aIGfSQGglflRa~ierc~~-~p~V~nlISlggph 132 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDN-APPVINYVSLGGPH 132 (306)
T ss_pred EEEEcchhHHHHHHHHHCCC-CCCcceEEEecCCc
Confidence 99999999999999988865 24577777776543
No 199
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.58 E-value=0.03 Score=47.81 Aligned_cols=45 Identities=27% Similarity=0.349 Sum_probs=34.1
Q ss_pred CCCCccEEEeecCchHHHHHHHHHHhhh-------ccccccceeeeCCccCCC
Q 024286 103 KDSKAHIYLAGDSSGGNIVHHVALRAVE-------SEVEILGNILLNPMFGGQ 148 (269)
Q Consensus 103 ~~~~~~i~l~G~S~Gg~la~~~a~~~~~-------~~~~~~~~i~~~p~~~~~ 148 (269)
...+ ++.|.|.|.||..+-.+|....+ ....++|+++.+|+++..
T Consensus 162 ~~~~-~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 162 YFSN-PLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 213 (433)
T ss_pred hcCC-CEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCch
Confidence 3456 89999999999877666665422 135789999999998664
No 200
>PLN02209 serine carboxypeptidase
Probab=96.52 E-value=0.012 Score=50.35 Aligned_cols=63 Identities=19% Similarity=0.237 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHhcccccC-CCCCccEEEeecCchHHHHHHHHHHhhh-------ccccccceeeeCCccCCC
Q 024286 85 DDGWTVLKWAKSRSWLQS-KDSKAHIYLAGDSSGGNIVHHVALRAVE-------SEVEILGNILLNPMFGGQ 148 (269)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~la~~~a~~~~~-------~~~~~~~~i~~~p~~~~~ 148 (269)
+++.+.++++........ ...+ ++.|+|.|.||..+-.+|....+ ....++|+++.+|+++..
T Consensus 145 ~~a~~~~~fl~~f~~~~p~~~~~-~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~ 215 (437)
T PLN02209 145 SEVKKIHEFLQKWLIKHPQFLSN-PFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIE 215 (437)
T ss_pred HHHHHHHHHHHHHHHhCccccCC-CEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChh
Confidence 445555555555433322 4556 89999999999877666655422 135789999999998653
No 201
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.46 E-value=0.024 Score=49.07 Aligned_cols=121 Identities=21% Similarity=0.116 Sum_probs=77.9
Q ss_pred CCCccccccccCCCCCcccEEEEEcCCccccCCCCchh-hHHHHHHHhhcCCCEEEeeccCCCCCC-----CC-------
Q 024286 14 HRPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSANSAI-YDILCRRLVGTCKAVVVSVNYRRAPEN-----RY------- 80 (269)
Q Consensus 14 ~~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~~~~-~~~~~~~l~~~~g~~v~~~d~r~~~~~-----~~------- 80 (269)
...+.+.+++|.+=++ -++.+=||||. |...... ...+...++ + ||++++-|--..... .+
T Consensus 14 ~~~i~fev~LP~~WNg---R~~~~GgGG~~-G~i~~~~~~~~~~~~~~-~-G~A~~~TD~Gh~~~~~~~~~~~~~n~~~~ 87 (474)
T PF07519_consen 14 APNIRFEVWLPDNWNG---RFLQVGGGGFA-GGINYADGKASMATALA-R-GYATASTDSGHQGSAGSDDASFGNNPEAL 87 (474)
T ss_pred cceEEEEEECChhhcc---CeEEECCCeee-Ccccccccccccchhhh-c-CeEEEEecCCCCCCcccccccccCCHHHH
Confidence 3467889999984233 36666677764 4333211 011333343 3 999999994432221 11
Q ss_pred ----CCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccC
Q 024286 81 ----PCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFG 146 (269)
Q Consensus 81 ----~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~ 146 (269)
...+.+...+-+.|.+.. ++..++ +-...|.|.||--++..|.++|+. +.|+++.+|.++
T Consensus 88 ~dfa~ra~h~~~~~aK~l~~~~--Yg~~p~-~sY~~GcS~GGRqgl~~AQryP~d---fDGIlAgaPA~~ 151 (474)
T PF07519_consen 88 LDFAYRALHETTVVAKALIEAF--YGKAPK-YSYFSGCSTGGRQGLMAAQRYPED---FDGILAGAPAIN 151 (474)
T ss_pred HHHHhhHHHHHHHHHHHHHHHH--hCCCCC-ceEEEEeCCCcchHHHHHHhChhh---cCeEEeCCchHH
Confidence 111334444555555553 345677 999999999999999999999987 999999999864
No 202
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.40 E-value=0.027 Score=48.01 Aligned_cols=56 Identities=21% Similarity=0.348 Sum_probs=38.1
Q ss_pred HHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhh-------ccccccceeeeCCccCCCC
Q 024286 90 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE-------SEVEILGNILLNPMFGGQE 149 (269)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~-------~~~~~~~~i~~~p~~~~~~ 149 (269)
..+|+.+..+ ...+ ++.|.|-|.+|...=.+|....+ ....++|+++-+|+++...
T Consensus 155 L~~wf~kfPe---y~~~-~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~ 217 (454)
T KOG1282|consen 155 LQKWFEKFPE---YKSN-DFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEI 217 (454)
T ss_pred HHHHHHhChh---hcCC-CeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccc
Confidence 3445554443 5666 99999999999665555444322 1357899999999987553
No 203
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.29 E-value=0.065 Score=43.04 Aligned_cols=103 Identities=12% Similarity=0.008 Sum_probs=62.3
Q ss_pred EEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCC-CCCchhhHHHHHHHHHhcccccCCCCCccEEE
Q 024286 33 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENR-YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 111 (269)
Q Consensus 33 ~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l 111 (269)
.||+.||-|=. ........+.+.+.+.-|..|.++..-.....+ +....+.+..+++.+.+-.. -.+ -+.+
T Consensus 27 P~ViwHG~GD~---c~~~g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~~~~----l~~-G~na 98 (314)
T PLN02633 27 PFIMLHGIGTQ---CSDATNANFTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQMKE----LSQ-GYNI 98 (314)
T ss_pred CeEEecCCCcc---cCCchHHHHHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhhchh----hhC-cEEE
Confidence 46778994422 222235666666644337777766543322222 22334555666666655222 234 6999
Q ss_pred eecCchHHHHHHHHHHhhhccccccceeeeCCc
Q 024286 112 AGDSSGGNIVHHVALRAVESEVEILGNILLNPM 144 (269)
Q Consensus 112 ~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~ 144 (269)
+|+|.||.++-.++.+.+. ...++-.|.+++.
T Consensus 99 IGfSQGGlflRa~ierc~~-~p~V~nlISlggp 130 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDG-GPPVYNYISLAGP 130 (314)
T ss_pred EEEccchHHHHHHHHHCCC-CCCcceEEEecCC
Confidence 9999999999999998865 2457777777644
No 204
>PLN02571 triacylglycerol lipase
Probab=95.85 E-value=0.024 Score=47.52 Aligned_cols=22 Identities=27% Similarity=0.366 Sum_probs=19.7
Q ss_pred cEEEeecCchHHHHHHHHHHhh
Q 024286 108 HIYLAGDSSGGNIVHHVALRAV 129 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~ 129 (269)
+|++.|||+||.+|+..|....
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~ 248 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIV 248 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHH
Confidence 6999999999999999998753
No 205
>PLN02408 phospholipase A1
Probab=95.80 E-value=0.017 Score=47.67 Aligned_cols=23 Identities=17% Similarity=0.265 Sum_probs=20.5
Q ss_pred cEEEeecCchHHHHHHHHHHhhh
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVE 130 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~ 130 (269)
+|.+.|||+||.+|+..|.....
T Consensus 201 sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred eEEEeccchHHHHHHHHHHHHHH
Confidence 69999999999999999987644
No 206
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.77 E-value=0.022 Score=47.99 Aligned_cols=73 Identities=16% Similarity=0.066 Sum_probs=46.4
Q ss_pred hhHHHHHHHhhcCCCE------EEeeccCCCCCCC--CCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHH
Q 024286 51 IYDILCRRLVGTCKAV------VVSVNYRRAPENR--YPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVH 122 (269)
Q Consensus 51 ~~~~~~~~l~~~~g~~------v~~~d~r~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~ 122 (269)
.|..+++.++.- ||. -..+|+|++...+ ....+..+...++..-+. -+.+ +++|++|||||.+.+
T Consensus 125 ~w~~~i~~lv~~-GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~-----~G~k-kVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 125 YWHELIENLVGI-GYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKL-----NGGK-KVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHhh-CcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHH-----cCCC-ceEEEecCCccHHHH
Confidence 367778887765 877 4567888755331 111223333344433333 2336 999999999999999
Q ss_pred HHHHHhhh
Q 024286 123 HVALRAVE 130 (269)
Q Consensus 123 ~~a~~~~~ 130 (269)
++....+.
T Consensus 198 yFl~w~~~ 205 (473)
T KOG2369|consen 198 YFLKWVEA 205 (473)
T ss_pred HHHhcccc
Confidence 99877644
No 207
>PLN00413 triacylglycerol lipase
Probab=95.72 E-value=0.018 Score=48.85 Aligned_cols=36 Identities=19% Similarity=0.163 Sum_probs=25.4
Q ss_pred hHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHH
Q 024286 86 DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~ 127 (269)
++.+.++.+.+. .... ++.+.|||+||++|...|..
T Consensus 269 ~i~~~Lk~ll~~-----~p~~-kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFDQ-----NPTS-KFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHH-----CCCC-eEEEEecCHHHHHHHHHHHH
Confidence 344455544443 2344 89999999999999988864
No 208
>PLN02324 triacylglycerol lipase
Probab=95.49 E-value=0.025 Score=47.33 Aligned_cols=21 Identities=24% Similarity=0.205 Sum_probs=19.3
Q ss_pred cEEEeecCchHHHHHHHHHHh
Q 024286 108 HIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~ 128 (269)
+|.+.|||+||.+|+..|...
T Consensus 216 sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred eEEEecCcHHHHHHHHHHHHH
Confidence 799999999999999998765
No 209
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.48 E-value=0.1 Score=42.87 Aligned_cols=96 Identities=17% Similarity=0.197 Sum_probs=61.9
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhc--------CCCEEEeeccCCCCCCCCC--Cch--hhHHHHHHHHHhccc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGT--------CKAVVVSVNYRRAPENRYP--CAY--DDGWTVLKWAKSRSW 99 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~--------~g~~v~~~d~r~~~~~~~~--~~~--~d~~~~~~~~~~~~~ 99 (269)
-.++++|| | -|+-.. |..++..|..- .-+.|++|..++.+=+..+ ... ..+..+++-++-+
T Consensus 153 ~PlLl~HG--w-PGsv~E--FykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlR-- 225 (469)
T KOG2565|consen 153 KPLLLLHG--W-PGSVRE--FYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLR-- 225 (469)
T ss_pred cceEEecC--C-CchHHH--HHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHH--
Confidence 36789999 4 233322 44555555432 1366999998876543322 222 2345555666555
Q ss_pred ccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeee
Q 024286 100 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILL 141 (269)
Q Consensus 100 ~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~ 141 (269)
++-+ +..|-|.-.|..|+..+|..+|+. |.|.-+.
T Consensus 226 ---Lg~n-kffiqGgDwGSiI~snlasLyPen---V~GlHln 260 (469)
T KOG2565|consen 226 ---LGYN-KFFIQGGDWGSIIGSNLASLYPEN---VLGLHLN 260 (469)
T ss_pred ---hCcc-eeEeecCchHHHHHHHHHhhcchh---hhHhhhc
Confidence 5667 999999999999999999999876 5555443
No 210
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=95.45 E-value=0.035 Score=44.03 Aligned_cols=104 Identities=13% Similarity=0.085 Sum_probs=46.2
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhc-CCCEEEeeccCCCCCC----C-CCCchhhHHHHHHHHHhcccccCCCC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGT-CKAVVVSVNYRRAPEN----R-YPCAYDDGWTVLKWAKSRSWLQSKDS 105 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~-~g~~v~~~d~r~~~~~----~-~~~~~~d~~~~~~~~~~~~~~~~~~~ 105 (269)
..||+.||-|=..++. ..+..+.+.+.+. -|.-|.+++.-..... + +......+..+++.+.+... ..
T Consensus 6 ~PvViwHGmGD~~~~~--~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~---L~- 79 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNP--SSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPE---LA- 79 (279)
T ss_dssp --EEEE--TT--S--T--TTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GG---GT-
T ss_pred CcEEEEEcCccccCCh--hHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChh---hh-
Confidence 4678889944211111 1133433333332 1777777764321100 1 11112233344444443322 12
Q ss_pred CccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCc
Q 024286 106 KAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 144 (269)
Q Consensus 106 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~ 144 (269)
+ -+.++|+|.||.++-.++.+.+. ..++-+|.+++.
T Consensus 80 ~-G~~~IGfSQGgl~lRa~vq~c~~--~~V~nlISlggp 115 (279)
T PF02089_consen 80 N-GFNAIGFSQGGLFLRAYVQRCND--PPVHNLISLGGP 115 (279)
T ss_dssp T--EEEEEETCHHHHHHHHHHH-TS--S-EEEEEEES--
T ss_pred c-ceeeeeeccccHHHHHHHHHCCC--CCceeEEEecCc
Confidence 4 79999999999999999988864 357777777644
No 211
>PLN02162 triacylglycerol lipase
Probab=95.44 E-value=0.027 Score=47.72 Aligned_cols=20 Identities=25% Similarity=0.348 Sum_probs=18.1
Q ss_pred cEEEeecCchHHHHHHHHHH
Q 024286 108 HIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~ 127 (269)
++.+.|||+||++|+..|..
T Consensus 279 kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 279 KYILTGHSLGGALAALFPAI 298 (475)
T ss_pred eEEEEecChHHHHHHHHHHH
Confidence 89999999999999988664
No 212
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.35 E-value=0.13 Score=43.91 Aligned_cols=107 Identities=14% Similarity=0.076 Sum_probs=70.3
Q ss_pred cccEEEEEcCCccccCCCCc-hhhHHHHHHHhhcCCCEEEeeccCCCCCC-C-------------CCCchhhHHHHHHHH
Q 024286 30 VVPVIIFFHGGSFAHSSANS-AIYDILCRRLVGTCKAVVVSVNYRRAPEN-R-------------YPCAYDDGWTVLKWA 94 (269)
Q Consensus 30 ~~p~vv~~HGgg~~~~~~~~-~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-~-------------~~~~~~d~~~~~~~~ 94 (269)
..|+.++|-|-|-. + ..+ ..-......+|++.|-.|+.+++|..+.+ + ....+.|+.+.|+.+
T Consensus 85 ~gPiFLmIGGEgp~-~-~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPE-S-DKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCceEEEEcCCCCC-C-CCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 33777777763321 1 111 00133455778888999999999976643 1 123456777777777
Q ss_pred HhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCc
Q 024286 95 KSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 144 (269)
Q Consensus 95 ~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~ 144 (269)
..+... -+.. +-+..|.|.-|.|+.++=.++|+- +.|.++.|..
T Consensus 163 n~k~n~--~~~~-~WitFGgSYsGsLsAW~R~~yPel---~~GsvASSap 206 (514)
T KOG2182|consen 163 NAKFNF--SDDS-KWITFGGSYSGSLSAWFREKYPEL---TVGSVASSAP 206 (514)
T ss_pred HhhcCC--CCCC-CeEEECCCchhHHHHHHHHhCchh---heeecccccc
Confidence 665321 3445 899999999999999999888876 6666666544
No 213
>PLN02934 triacylglycerol lipase
Probab=95.25 E-value=0.033 Score=47.71 Aligned_cols=36 Identities=17% Similarity=0.143 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHh
Q 024286 87 GWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
+...++.+.+. .... ++.+.|||+||++|...+...
T Consensus 307 v~~~lk~ll~~-----~p~~-kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 307 VRSKLKSLLKE-----HKNA-KFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred HHHHHHHHHHH-----CCCC-eEEEeccccHHHHHHHHHHHH
Confidence 44455555444 2334 899999999999999987643
No 214
>PLN02310 triacylglycerol lipase
Probab=95.22 E-value=0.028 Score=47.04 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=19.6
Q ss_pred cEEEeecCchHHHHHHHHHHhh
Q 024286 108 HIYLAGDSSGGNIVHHVALRAV 129 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~ 129 (269)
+|.|.|||+||.+|+..|....
T Consensus 210 sI~vTGHSLGGALAtLaA~dl~ 231 (405)
T PLN02310 210 SLTVTGHSLGGALALLNAYEAA 231 (405)
T ss_pred eEEEEcccHHHHHHHHHHHHHH
Confidence 7999999999999999987653
No 215
>PLN02802 triacylglycerol lipase
Probab=95.18 E-value=0.035 Score=47.57 Aligned_cols=23 Identities=26% Similarity=0.267 Sum_probs=20.3
Q ss_pred cEEEeecCchHHHHHHHHHHhhh
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVE 130 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~ 130 (269)
+|.|.|||+||.+|+..|.....
T Consensus 331 sI~VTGHSLGGALAtLaA~dL~~ 353 (509)
T PLN02802 331 SITVTGHSLGAALALLVADELAT 353 (509)
T ss_pred eEEEeccchHHHHHHHHHHHHHH
Confidence 79999999999999999887644
No 216
>PLN02761 lipase class 3 family protein
Probab=95.10 E-value=0.042 Score=47.25 Aligned_cols=21 Identities=24% Similarity=0.298 Sum_probs=19.2
Q ss_pred cEEEeecCchHHHHHHHHHHh
Q 024286 108 HIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~ 128 (269)
+|.+.|||+||.||+..|...
T Consensus 295 sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 295 SITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 799999999999999998765
No 217
>PLN02753 triacylglycerol lipase
Probab=95.09 E-value=0.042 Score=47.28 Aligned_cols=22 Identities=27% Similarity=0.357 Sum_probs=19.8
Q ss_pred cEEEeecCchHHHHHHHHHHhh
Q 024286 108 HIYLAGDSSGGNIVHHVALRAV 129 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~ 129 (269)
+|.+.|||+||.+|+..|....
T Consensus 313 sItVTGHSLGGALAtLaA~Dla 334 (531)
T PLN02753 313 SITVTGHSLGGALAILSAYDIA 334 (531)
T ss_pred eEEEEccCHHHHHHHHHHHHHH
Confidence 8999999999999999987653
No 218
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.08 E-value=0.047 Score=46.93 Aligned_cols=23 Identities=26% Similarity=0.388 Sum_probs=20.1
Q ss_pred cEEEeecCchHHHHHHHHHHhhh
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVE 130 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~ 130 (269)
+|.|.|||+||.+|+..|.....
T Consensus 319 SItVTGHSLGGALAtLaA~DIa~ 341 (525)
T PLN03037 319 SLTITGHSLGGALALLNAYEAAR 341 (525)
T ss_pred eEEEeccCHHHHHHHHHHHHHHH
Confidence 79999999999999999876543
No 219
>PLN02719 triacylglycerol lipase
Probab=94.84 E-value=0.052 Score=46.57 Aligned_cols=23 Identities=30% Similarity=0.410 Sum_probs=20.2
Q ss_pred cEEEeecCchHHHHHHHHHHhhh
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVE 130 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~ 130 (269)
+|.|.|||+||.||+..|.....
T Consensus 299 sItVTGHSLGGALAtLaA~Dl~~ 321 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYDVAE 321 (518)
T ss_pred eEEEecCcHHHHHHHHHHHHHHH
Confidence 79999999999999999876543
No 220
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.75 E-value=0.3 Score=41.88 Aligned_cols=66 Identities=23% Similarity=0.291 Sum_probs=44.6
Q ss_pred CchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCC
Q 024286 82 CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQ 148 (269)
Q Consensus 82 ~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~ 148 (269)
..-+|+..+.+.+.+....+.-... +.+|+|-|.||.-+-.+|....++....++.+++++++...
T Consensus 174 ~~~~D~~~~~~~f~~~fp~~~r~~~-~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlign 239 (498)
T COG2939 174 GAGKDVYSFLRLFFDKFPHYARLLS-PKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGN 239 (498)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhcC-ceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecC
Confidence 3446777766666655444433345 89999999999998888877665444567777777665443
No 221
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.58 E-value=0.077 Score=45.99 Aligned_cols=62 Identities=10% Similarity=-0.019 Sum_probs=47.1
Q ss_pred ceeEEecCCCcChhH--HHHHHHHHHHCC--------CCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 204 KSLVVVAGLDLIQDW--QLAYMEGLKKAG--------QDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 204 P~li~~G~~D~~~~~--~~~~~~~l~~~~--------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
++|+.||..|.+++. +..+++++.+.- .-+++...||++|+..... ...-..+..+.+|+++
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g--~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG--PDPFDALTALVDWVEN 426 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC--CCCCCHHHHHHHHHhC
Confidence 899999999999875 567777665442 2479999999999975431 2234789999999986
No 222
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=93.63 E-value=0.33 Score=37.62 Aligned_cols=63 Identities=22% Similarity=0.259 Sum_probs=38.0
Q ss_pred CCEEEeeccCCC--C-----CCCCCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhh
Q 024286 64 KAVVVSVNYRRA--P-----ENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE 130 (269)
Q Consensus 64 g~~v~~~d~r~~--~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~ 130 (269)
||.+..++|+.+ | ..++...+.+-.+.+....+... ...+ +++|+|+|+|+.+|...+.+...
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~---~~~~-~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAI---AAGG-PVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhc---cCCC-CEEEEEECHHHHHHHHHHHHHHh
Confidence 677777887742 2 22333333333333333322211 2445 89999999999999988877644
No 223
>PLN02847 triacylglycerol lipase
Probab=93.57 E-value=0.13 Score=45.03 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=19.6
Q ss_pred cEEEeecCchHHHHHHHHHHhh
Q 024286 108 HIYLAGDSSGGNIVHHVALRAV 129 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~ 129 (269)
++.|.|||+||++|..++....
T Consensus 252 kLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 252 KIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred eEEEeccChHHHHHHHHHHHHh
Confidence 8999999999999998887654
No 224
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.44 E-value=0.99 Score=35.50 Aligned_cols=24 Identities=29% Similarity=0.437 Sum_probs=19.9
Q ss_pred CCCccEEEeecCchHHHHHHHHHHh
Q 024286 104 DSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
... ++.|+|-||||.+|..+....
T Consensus 193 g~g-~~~~~g~Smgg~~a~~vgS~~ 216 (371)
T KOG1551|consen 193 GLG-NLNLVGRSMGGDIANQVGSLH 216 (371)
T ss_pred Ccc-cceeeeeecccHHHHhhcccC
Confidence 344 899999999999999887643
No 225
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.18 E-value=0.26 Score=40.74 Aligned_cols=41 Identities=22% Similarity=0.213 Sum_probs=29.4
Q ss_pred hHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhcc
Q 024286 86 DGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESE 132 (269)
Q Consensus 86 d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~ 132 (269)
.+.+.++-+.+.. ..- +|.+.|||+||.+|...|......+
T Consensus 156 ~~~~~~~~L~~~~-----~~~-~i~vTGHSLGgAlA~laa~~i~~~~ 196 (336)
T KOG4569|consen 156 GLDAELRRLIELY-----PNY-SIWVTGHSLGGALASLAALDLVKNG 196 (336)
T ss_pred HHHHHHHHHHHhc-----CCc-EEEEecCChHHHHHHHHHHHHHHcC
Confidence 4455555555552 233 8999999999999999998765543
No 226
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.59 E-value=0.38 Score=38.13 Aligned_cols=21 Identities=38% Similarity=0.680 Sum_probs=19.2
Q ss_pred cEEEeecCchHHHHHHHHHHh
Q 024286 108 HIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~ 128 (269)
+|.+.|||.||.+|..+..+.
T Consensus 277 ~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 277 RIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred eEEEeccccchHHHHHhcccc
Confidence 999999999999999998764
No 227
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.59 E-value=0.38 Score=38.13 Aligned_cols=21 Identities=38% Similarity=0.680 Sum_probs=19.2
Q ss_pred cEEEeecCchHHHHHHHHHHh
Q 024286 108 HIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~ 128 (269)
+|.+.|||.||.+|..+..+.
T Consensus 277 ~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 277 RIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred eEEEeccccchHHHHHhcccc
Confidence 999999999999999998764
No 228
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=90.56 E-value=1.5 Score=34.85 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=59.3
Q ss_pred EcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC-----CCCCchhhHHHHHHHHHhcccccCCCCCccEEE
Q 024286 37 FHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-----RYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 111 (269)
Q Consensus 37 ~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l 111 (269)
=-|.||+-.. ...-++++..- +++++++-|...|.- .-....+.....++-+.++-..+.-+...|++|
T Consensus 40 pTGtGWVdp~-----a~~a~E~l~~G-D~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l 113 (289)
T PF10081_consen 40 PTGTGWVDPW-----AVDALEYLYGG-DVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYL 113 (289)
T ss_pred CCCCCccCHH-----HHhHHHHHhCC-CeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEE
Confidence 3467775222 23445566655 788999998876542 122233334444444444433333333338999
Q ss_pred eecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 112 AGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 112 ~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
.|-|+|++-+........+....+.|++...|..
T Consensus 114 ~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 114 YGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred eccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 9999999876655443333344577777776644
No 229
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=90.30 E-value=1.7 Score=35.69 Aligned_cols=46 Identities=26% Similarity=0.313 Sum_probs=35.0
Q ss_pred CCCCccEEEeecCchHHHHHHHHHHhhh-------ccccccceeeeCCccCCCC
Q 024286 103 KDSKAHIYLAGDSSGGNIVHHVALRAVE-------SEVEILGNILLNPMFGGQE 149 (269)
Q Consensus 103 ~~~~~~i~l~G~S~Gg~la~~~a~~~~~-------~~~~~~~~i~~~p~~~~~~ 149 (269)
...+ +++|.|-|.||..+=.+|....+ ....++|+++-+|+++...
T Consensus 48 ~~~~-~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~ 100 (319)
T PLN02213 48 YFSN-PLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDF 100 (319)
T ss_pred cccC-CeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCccc
Confidence 4566 89999999999877666665422 1357899999999987643
No 230
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=89.90 E-value=1.7 Score=33.27 Aligned_cols=32 Identities=25% Similarity=0.212 Sum_probs=23.7
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCc
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPM 144 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~ 144 (269)
+|.|+++|||-..|..+... ..++..+++++-
T Consensus 58 ~i~lvAWSmGVw~A~~~l~~-----~~~~~aiAINGT 89 (213)
T PF04301_consen 58 EIYLVAWSMGVWAANRVLQG-----IPFKRAIAINGT 89 (213)
T ss_pred eEEEEEEeHHHHHHHHHhcc-----CCcceeEEEECC
Confidence 89999999999988777532 236666666643
No 231
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=89.81 E-value=9.7 Score=31.10 Aligned_cols=91 Identities=12% Similarity=0.012 Sum_probs=53.5
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCC-------------------C-CchhhHHHHH
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRY-------------------P-CAYDDGWTVL 91 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~-------------------~-~~~~d~~~~~ 91 (269)
..|+-+-|.--..|.........+.+.|....+..+++.--.+-+...+ . ...+.+..++
T Consensus 32 ~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AY 111 (423)
T COG3673 32 RLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAY 111 (423)
T ss_pred eEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Confidence 5777777732222222212234445555553366666553333222211 1 1135788899
Q ss_pred HHHHhcccccCCCCCccEEEeecCchHHHHHHHHHH
Q 024286 92 KWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 92 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~ 127 (269)
.++.+..+ ..+ +|++.|+|-|+++|--+|..
T Consensus 112 rFL~~~ye----pGD-~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 112 RFLIFNYE----PGD-EIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHhcC----CCC-eEEEeeccchhHHHHHHHHH
Confidence 99998854 234 89999999999999877765
No 232
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=89.45 E-value=1.1 Score=33.16 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeee
Q 024286 85 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILL 141 (269)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~ 141 (269)
.++.++++-|.... .... ++.++|||+|+.++...+.. ....+..++++
T Consensus 92 ~~L~~f~~gl~a~~----~~~~-~~tv~GHSYGS~v~G~A~~~---~~~~vddvv~~ 140 (177)
T PF06259_consen 92 PRLARFLDGLRATH----GPDA-HLTVVGHSYGSTVVGLAAQQ---GGLRVDDVVLV 140 (177)
T ss_pred HHHHHHHHHhhhhc----CCCC-CEEEEEecchhHHHHHHhhh---CCCCcccEEEE
Confidence 34555555555442 2344 89999999999999888765 23346666665
No 233
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.29 E-value=12 Score=31.22 Aligned_cols=62 Identities=15% Similarity=0.108 Sum_probs=50.1
Q ss_pred ceeEEecCCCcChh--HHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 204 KSLVVVAGLDLIQD--WQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 204 P~li~~G~~D~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
+.+.+.+..|.+++ ..++|.+..++.|..++-.-+.++-|.-+.-. .+..+.+...+|+++.
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~---~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRS---FPKTYLKKCSEFLRSV 290 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeecc---CcHHHHHHHHHHHHhc
Confidence 67788899998876 45888888899999999999999999864332 4678889999999853
No 234
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=88.87 E-value=0.89 Score=37.98 Aligned_cols=84 Identities=13% Similarity=0.115 Sum_probs=41.4
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhc-CCCEEEeeccCCCCCCCCCC----chhhHHHHHHHHHhcccccCCCCC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGT-CKAVVVSVNYRRAPENRYPC----AYDDGWTVLKWAKSRSWLQSKDSK 106 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~-~g~~v~~~d~r~~~~~~~~~----~~~d~~~~~~~~~~~~~~~~~~~~ 106 (269)
-.||+.|| +.+ .+...|...+...... .+..++...++..-..++.. ..+...+.++.+... ..+
T Consensus 81 HLvVlthG---i~~-~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~------si~ 150 (405)
T KOG4372|consen 81 HLVVLTHG---LHG-ADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDY------SIE 150 (405)
T ss_pred eEEEeccc---ccc-ccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhcc------ccc
Confidence 68999999 444 3333344444444332 14444444444321112111 112222222222221 235
Q ss_pred ccEEEeecCchHHHHHHHHH
Q 024286 107 AHIYLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 107 ~~i~l~G~S~Gg~la~~~a~ 126 (269)
+|-.+|||.||.++.....
T Consensus 151 -kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 151 -KISFVGHSLGGLVARYAIG 169 (405)
T ss_pred -eeeeeeeecCCeeeeEEEE
Confidence 9999999999987765443
No 235
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=88.84 E-value=0.88 Score=34.06 Aligned_cols=66 Identities=11% Similarity=-0.099 Sum_probs=45.5
Q ss_pred CCceeEEecCCCcChhHH--HHHHHHHHHCC-CCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 202 FPKSLVVVAGLDLIQDWQ--LAYMEGLKKAG-QDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 202 ~~P~li~~G~~D~~~~~~--~~~~~~l~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.+++|-+=|+.|.+...+ .+....+.... .....++.+|+||- .++...-..++..-.+.+||.+|
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHY-GlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHY-GLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCee-ecccchhhhhhhhHHHHHHHHhC
Confidence 348888999999997654 33323333332 23466778999994 44545667888999999999875
No 236
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.95 E-value=1.8 Score=38.14 Aligned_cols=61 Identities=18% Similarity=0.263 Sum_probs=35.2
Q ss_pred CCEEEeeccCCC-----CCCCCCCc----hhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHh
Q 024286 64 KAVVVSVNYRRA-----PENRYPCA----YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 64 g~~v~~~d~r~~-----~~~~~~~~----~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
+.+++.++|+.. +..+.+.. ..-..+.++.+..... .+.. +|.-+||||||.+|=.++...
T Consensus 478 ~~Rii~l~Y~Tsit~w~~~~p~e~~r~sl~~Rs~~lleql~~~~V---G~~R-PivwI~HSmGGLl~K~lLlda 547 (697)
T KOG2029|consen 478 KSRIIGLEYTTSITDWRARCPAEAHRRSLAARSNELLEQLQAAGV---GDDR-PIVWIGHSMGGLLAKKLLLDA 547 (697)
T ss_pred cceEEEeecccchhhhcccCcccchhhHHHHHHHHHHHHHHHhcc---CCCC-ceEEEecccchHHHHHHHHHH
Confidence 456777777743 11111111 1223445555544432 3456 899999999999987666554
No 237
>PF03283 PAE: Pectinacetylesterase
Probab=86.68 E-value=1.7 Score=36.35 Aligned_cols=60 Identities=20% Similarity=0.069 Sum_probs=40.2
Q ss_pred hhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhhc---cccccceeeeCCccCC
Q 024286 84 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVES---EVEILGNILLNPMFGG 147 (269)
Q Consensus 84 ~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~---~~~~~~~i~~~p~~~~ 147 (269)
..-+.++++++.+..- -+++ +++|.|.|+||.-++..+-...+. ...+.++.-...+++.
T Consensus 137 ~~i~~avl~~l~~~gl---~~a~-~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGL---PNAK-QVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDN 199 (361)
T ss_pred HHHHHHHHHHHHHhcC---cccc-eEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccc
Confidence 3457888999988732 4567 999999999999888766554332 2344444444444444
No 238
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=84.85 E-value=3.7 Score=25.57 Aligned_cols=41 Identities=17% Similarity=0.286 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHh
Q 024286 85 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
..+.+-++|+++.... -.++ ++.|+|-|.|=.+|..++...
T Consensus 21 ~~V~~qI~yvk~~~~~--~GpK-~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKI--NGPK-KVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHC-----TS-S-EEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC--CCCc-eEEEEecCCcccHHHHHHHHh
Confidence 5678888999886543 3467 999999999999998888764
No 239
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=84.65 E-value=1.9 Score=34.66 Aligned_cols=40 Identities=18% Similarity=0.138 Sum_probs=31.1
Q ss_pred hhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHh
Q 024286 84 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 84 ~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
...+.+++.++.+.. .+.++|.|+|+|-|++.|-.++...
T Consensus 74 ~~~I~~ay~~l~~~~-----~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 74 EARIRDAYRFLSKNY-----EPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHHHHHHHHHhcc-----CCcceEEEEecCccHHHHHHHHHHH
Confidence 456788889987774 3333899999999999998887653
No 240
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=81.62 E-value=5.4 Score=25.13 Aligned_cols=60 Identities=13% Similarity=0.104 Sum_probs=40.4
Q ss_pred ceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeC--CCCchHHHHHHHHHHHhh
Q 024286 204 KSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFL--PNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 204 P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~~~i~~fl~ 266 (269)
-++|+||..|..--. ..+++.|.+.|- ....++--||+..-. ...+..+++.+++.+|++
T Consensus 18 ~v~i~HG~~eh~~ry-~~~a~~L~~~G~--~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 18 VVVIVHGFGEHSGRY-AHLAEFLAEQGY--AVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEeCCcHHHHHHH-HHHHHHHHhCCC--EEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 589999997764322 456677877765 456666677775421 234567889999988874
No 241
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=79.90 E-value=2.3 Score=25.51 Aligned_cols=12 Identities=25% Similarity=0.542 Sum_probs=6.2
Q ss_pred CCcccEEEEEcC
Q 024286 28 EVVVPVIIFFHG 39 (269)
Q Consensus 28 ~~~~p~vv~~HG 39 (269)
.+++|+|++.||
T Consensus 40 ~~~k~pVll~HG 51 (63)
T PF04083_consen 40 NKKKPPVLLQHG 51 (63)
T ss_dssp TTT--EEEEE--
T ss_pred CCCCCcEEEECC
Confidence 344599999999
No 242
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=79.63 E-value=4.7 Score=33.45 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=29.6
Q ss_pred CCCccEEEeecCchHHHHHHHHHHhhhcc--ccccceeeeCCcc
Q 024286 104 DSKAHIYLAGDSSGGNIVHHVALRAVESE--VEILGNILLNPMF 145 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg~la~~~a~~~~~~~--~~~~~~i~~~p~~ 145 (269)
... ++.|+|||+|+-+....+....++. ..+.-++++...+
T Consensus 218 G~R-pVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GER-PVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCC-ceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 444 8999999999998887776665542 3367778776444
No 243
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=79.26 E-value=4.6 Score=29.94 Aligned_cols=37 Identities=24% Similarity=0.335 Sum_probs=29.0
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeec
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
.|.+||+-| .+|+..+.....+.+.|... |+.+..+|
T Consensus 22 ~~~viW~TG---LSGsGKSTiA~ale~~L~~~-G~~~y~LD 58 (197)
T COG0529 22 KGAVIWFTG---LSGSGKSTIANALEEKLFAK-GYHVYLLD 58 (197)
T ss_pred CCeEEEeec---CCCCCHHHHHHHHHHHHHHc-CCeEEEec
Confidence 389999999 66676665556666777767 99999999
No 244
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=79.21 E-value=6.6 Score=34.90 Aligned_cols=63 Identities=13% Similarity=0.199 Sum_probs=41.7
Q ss_pred ceeEEecCCCcChhH---HHHHHHHHHHC-C--CCeEEEEeCCCceeeeeC---CC--------CchHHHHHHHHHHHhh
Q 024286 204 KSLVVVAGLDLIQDW---QLAYMEGLKKA-G--QDVKLLYLEQATIGFYFL---PN--------NGHFYTVMDEISNFVS 266 (269)
Q Consensus 204 P~li~~G~~D~~~~~---~~~~~~~l~~~-~--~~~~~~~~~~~~H~~~~~---~~--------~~~~~~~~~~i~~fl~ 266 (269)
|++|+||+.|.++|. ++.+....+.. + .+.++++.+++.|. ..+ +. -....+.++.+-.+|+
T Consensus 557 PaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHf-Daf~~~pG~~~r~VPlh~Y~~qALd~M~a~L~ 635 (690)
T PF10605_consen 557 PAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHF-DAFLDFPGFDTRFVPLHPYFFQALDLMWAHLK 635 (690)
T ss_pred ceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeec-hhhccCCCCCcccccccHHHHHHHHHHHHHhh
Confidence 999999999998875 45555554432 3 35788888887774 322 22 1234577777777776
Q ss_pred c
Q 024286 267 C 267 (269)
Q Consensus 267 ~ 267 (269)
+
T Consensus 636 ~ 636 (690)
T PF10605_consen 636 S 636 (690)
T ss_pred c
Confidence 4
No 245
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=77.98 E-value=16 Score=35.74 Aligned_cols=93 Identities=15% Similarity=0.134 Sum_probs=54.0
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHH-HHHHHHhcccccCCCCCccEE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWT-VLKWAKSRSWLQSKDSKAHIY 110 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~i~ 110 (269)
|.+.|+|. +-|. ...+..+++++-+..+.+.+.- ..+ .+.++++.. .++.+++ +.|+.+.-
T Consensus 2124 ~~~Ffv~p---IEG~------tt~l~~la~rle~PaYglQ~T~--~vP-~dSies~A~~yirqirk------vQP~GPYr 2185 (2376)
T KOG1202|consen 2124 PPLFFVHP---IEGF------TTALESLASRLEIPAYGLQCTE--AVP-LDSIESLAAYYIRQIRK------VQPEGPYR 2185 (2376)
T ss_pred CceEEEec---cccc------hHHHHHHHhhcCCcchhhhccc--cCC-cchHHHHHHHHHHHHHh------cCCCCCee
Confidence 89999997 3333 3445566766555544443321 111 122333332 2333333 46666899
Q ss_pred EeecCchHHHHHHHHHHhhhccccccceeeeCC
Q 024286 111 LAGDSSGGNIVHHVALRAVESEVEILGNILLNP 143 (269)
Q Consensus 111 l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p 143 (269)
|+|.|+|+.++..+|....+.. ....+|++-+
T Consensus 2186 l~GYSyG~~l~f~ma~~Lqe~~-~~~~lillDG 2217 (2376)
T KOG1202|consen 2186 LAGYSYGACLAFEMASQLQEQQ-SPAPLILLDG 2217 (2376)
T ss_pred eeccchhHHHHHHHHHHHHhhc-CCCcEEEecC
Confidence 9999999999999998875542 2344666643
No 246
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=77.40 E-value=37 Score=29.16 Aligned_cols=106 Identities=22% Similarity=0.197 Sum_probs=65.2
Q ss_pred cccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEee--c-cCCC-----------------CCCCCCCchhhHHH
Q 024286 30 VVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSV--N-YRRA-----------------PENRYPCAYDDGWT 89 (269)
Q Consensus 30 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~--d-~r~~-----------------~~~~~~~~~~d~~~ 89 (269)
+.|+||++=| ..|+....+...++.+|..+ |+.|..+ | ||.. +..+-.++++=+.+
T Consensus 98 ~~P~vImmvG---LQGsGKTTt~~KLA~~lkk~-~~kvllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~ 173 (451)
T COG0541 98 KPPTVILMVG---LQGSGKTTTAGKLAKYLKKK-GKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKA 173 (451)
T ss_pred CCCeEEEEEe---ccCCChHhHHHHHHHHHHHc-CCceEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHH
Confidence 3389999999 66676666678888888885 8876544 4 5521 11111122222233
Q ss_pred HHHHHHhcccc------------------------cCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeee
Q 024286 90 VLKWAKSRSWL------------------------QSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILL 141 (269)
Q Consensus 90 ~~~~~~~~~~~------------------------~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~ 141 (269)
+++++++...- -.+.|. .+.++=.||=|--|...|....+ ...+.|+|+.
T Consensus 174 al~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~-E~llVvDam~GQdA~~~A~aF~e-~l~itGvIlT 247 (451)
T COG0541 174 ALEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPD-ETLLVVDAMIGQDAVNTAKAFNE-ALGITGVILT 247 (451)
T ss_pred HHHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCC-eEEEEEecccchHHHHHHHHHhh-hcCCceEEEE
Confidence 33333332100 006788 99999999999999999887644 3556666654
No 247
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=71.86 E-value=7.8 Score=23.86 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=23.0
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEee
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSV 70 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~ 70 (269)
|.++++|||.- .. ...++..+|.+.|+.++.+
T Consensus 32 ~~~~lvhGga~----~G---aD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 32 PDMVLVHGGAP----KG---ADRIAARWARERGVPVIRF 63 (71)
T ss_pred CCEEEEECCCC----CC---HHHHHHHHHHHCCCeeEEe
Confidence 78889999652 11 3678889998878876543
No 248
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=70.72 E-value=17 Score=28.16 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=19.8
Q ss_pred hHHHHHHHHHhcccc-cCCCCCccEEEeecCchHHH
Q 024286 86 DGWTVLKWAKSRSWL-QSKDSKAHIYLAGDSSGGNI 120 (269)
Q Consensus 86 d~~~~~~~~~~~~~~-~~~~~~~~i~l~G~S~Gg~l 120 (269)
-+..+++|+...... .....+ .++|+|.| ||..
T Consensus 108 ~LKNaiDwls~~~~~~~~~~~K-pvaivgaS-gg~~ 141 (219)
T TIGR02690 108 SQKDQIDWIPLSVGPVRPTQGK-TLAVMQVS-GGSQ 141 (219)
T ss_pred HHHHHHHhcccCcccccccCCC-cEEEEEeC-CcHh
Confidence 356788888663110 013456 89999998 5433
No 249
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=66.54 E-value=37 Score=28.51 Aligned_cols=110 Identities=13% Similarity=0.048 Sum_probs=60.0
Q ss_pred CCccccccccCCCCCcccEEEEEcCCccccCCC---Cchhh-HHHHHHHhhcCCCEEEee-ccCCC--------------
Q 024286 15 RPNIAELEKPVSSEVVVPVIIFFHGGSFAHSSA---NSAIY-DILCRRLVGTCKAVVVSV-NYRRA-------------- 75 (269)
Q Consensus 15 ~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~---~~~~~-~~~~~~l~~~~g~~v~~~-d~r~~-------------- 75 (269)
+...+.+|.|.+-..+...+|+..|+.+--++- .+... .+.....+.+....++.+ |-+..
T Consensus 108 W~HnV~iyiPd~v~~~~allvvnnG~~~kk~~~~~~~s~d~~~e~la~var~t~tpiisVsDvPNQ~lty~ddg~~lrED 187 (507)
T COG4287 108 WFHNVGIYIPDNVNYKDALLVVNNGTRRKKEGERYYDSFDLDVEELAWVARETETPIISVSDVPNQYLTYQDDGKPLRED 187 (507)
T ss_pred hhhcceEEccCCcChhceEEEEecCcccCCCCccccCCccCCHHHHHHHHHhccCceEEeccCCCcceeeccCCccccch
Confidence 345688999998766657888888854321111 11001 133334455444444443 32211
Q ss_pred -------------CCC--CCC---CchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHH
Q 024286 76 -------------PEN--RYP---CAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 76 -------------~~~--~~~---~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~ 127 (269)
|+. ..| ..+--+.++++-.++....+ ..+ .+.+.|-|=-|..+...|..
T Consensus 188 esVa~SwslFmeaPeqr~~lPL~VPMv~a~srAMdlAq~eL~q~--~Ik-~F~VTGaSKRgWttwLTAIa 254 (507)
T COG4287 188 ESVAHSWSLFMEAPEQRPFLPLLVPMVYAVSRAMDLAQDELEQV--EIK-GFMVTGASKRGWTTWLTAIA 254 (507)
T ss_pred HHHHHHHHHHhcCcccccCcccccHHHHHHHHHHHHHHhhhhhe--eee-eEEEeccccchHHHHHHHhc
Confidence 000 001 11224555666666654444 445 99999999999988888765
No 250
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=65.41 E-value=74 Score=25.94 Aligned_cols=64 Identities=11% Similarity=-0.025 Sum_probs=41.9
Q ss_pred ceeEEecCCCcCh--hHHHHHHHHHHHCCCC-eEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhcC
Q 024286 204 KSLVVVAGLDLIQ--DWQLAYMEGLKKAGQD-VKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 204 P~li~~G~~D~~~--~~~~~~~~~l~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.++-+-|+.|.+- -++++..+.+.+...+ ...+.-++.||-- .+...--+++..-++.+||.++
T Consensus 341 aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYG-VFnGsrfr~eIvPri~dFI~~~ 407 (415)
T COG4553 341 ALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYG-VFNGSRFREEIVPRIRDFIRRY 407 (415)
T ss_pred eEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccc-eeccchHHHHHHHHHHHHHHHh
Confidence 6788899999874 3444433444333222 3456678899954 3445566788999999999864
No 251
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=65.28 E-value=26 Score=29.12 Aligned_cols=80 Identities=19% Similarity=0.195 Sum_probs=52.4
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYL 111 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l 111 (269)
..|||-|-.++...+..-..-...++.+++. |-.|..-=|+..-.++-..-+.|+.+.+.++++.. ..+ .|+|
T Consensus 267 APVIFSHSsA~~vcns~rNVPDdVL~llk~N-gGvVMVnfy~~~isc~~~A~v~~v~~Hi~hIr~Va-----G~~-hIGl 339 (419)
T KOG4127|consen 267 APVIFSHSSAYSVCNSSRNVPDDVLQLLKEN-GGVVMVNFYPGFISCSDRATVSDVADHINHIRAVA-----GID-HIGL 339 (419)
T ss_pred CceEeecccHHHHhcCccCCcHHHHHHHhhc-CCEEEEEeecccccCCCcccHHHHHHHHHHHHHhh-----ccc-eeec
Confidence 5688999877655444333346778888876 65555444554433444445899999999999984 445 8888
Q ss_pred eecCchH
Q 024286 112 AGDSSGG 118 (269)
Q Consensus 112 ~G~S~Gg 118 (269)
.|.=-|-
T Consensus 340 Gg~yDGi 346 (419)
T KOG4127|consen 340 GGDYDGI 346 (419)
T ss_pred cCCcCCc
Confidence 7754443
No 252
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=63.73 E-value=41 Score=22.40 Aligned_cols=48 Identities=13% Similarity=0.269 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHCCCCeEEEEeCCCc-eeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 218 WQLAYMEGLKKAGQDVKLLYLEQAT-IGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 218 ~~~~~~~~l~~~~~~~~~~~~~~~~-H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
.+..|...|+..+.++++.... .+ ..+.+. +.+...++..++.+|+.+
T Consensus 12 ~AqaF~DYl~sqgI~~~i~~~~-~~~~~lwl~-de~~~~~a~~el~~Fl~n 60 (101)
T PF12122_consen 12 AAQAFIDYLASQGIELQIEPEG-QGQFALWLH-DEEHLEQAEQELEEFLQN 60 (101)
T ss_dssp HHHHHHHHHHHTT--EEEE-SS-SE--EEEES--GGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCeEEEEECC-CCceEEEEe-CHHHHHHHHHHHHHHHHC
Confidence 3579999999999877777643 34 444444 667788888899999875
No 253
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=62.97 E-value=6.8 Score=33.31 Aligned_cols=64 Identities=13% Similarity=0.144 Sum_probs=40.7
Q ss_pred CceeEEecCCCcChhHH-HHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 203 PKSLVVVAGLDLIQDWQ-LAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
.|++|+.|.-|.+-++- ..+.+.+...|..+-.+..||.|+... .+-.+....+...+++||.+
T Consensus 190 ~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~-~~l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 190 YPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPK-WPLTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTT-T-S-S-CCHHHHHHHHHHHH
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCccccc-CCCCcCHHHHHHHHHHHHhc
Confidence 39999999999987663 455566788888888888899888631 12233455788889999875
No 254
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=58.12 E-value=51 Score=23.98 Aligned_cols=36 Identities=22% Similarity=0.344 Sum_probs=25.7
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeec
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
|.|||+-| ..|+..+..-..+.+.|... |+.|+.+|
T Consensus 2 g~vIwltG---lsGsGKtTlA~~L~~~L~~~-g~~~~~LD 37 (156)
T PF01583_consen 2 GFVIWLTG---LSGSGKTTLARALERRLFAR-GIKVYLLD 37 (156)
T ss_dssp -EEEEEES---STTSSHHHHHHHHHHHHHHT-TS-EEEEE
T ss_pred CEEEEEEC---CCCCCHHHHHHHHHHHHHHc-CCcEEEec
Confidence 89999999 55566655556666677666 99999998
No 255
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=56.26 E-value=37 Score=25.37 Aligned_cols=64 Identities=17% Similarity=0.302 Sum_probs=43.0
Q ss_pred hHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHH
Q 024286 52 YDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 52 ~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~ 127 (269)
...+.+.+....|..+.+|.|.++ ++ .-++.+++|+.... ...+ ++.+++.|.|+.-++....+
T Consensus 58 v~~~~~~i~~aD~li~~tPeYn~s----~p---g~lKnaiD~l~~~~----~~~K-pv~~~~~s~g~~~~~~a~~~ 121 (184)
T COG0431 58 VQALREAIAAADGLIIATPEYNGS----YP---GALKNAIDWLSREA----LGGK-PVLLLGTSGGGAGGLRAQNQ 121 (184)
T ss_pred HHHHHHHHHhCCEEEEECCccCCC----CC---HHHHHHHHhCCHhH----hCCC-cEEEEecCCCchhHHHHHHH
Confidence 455666667766888888888752 22 24577888887762 3455 78888888877666655444
No 256
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=54.76 E-value=28 Score=28.01 Aligned_cols=32 Identities=28% Similarity=0.373 Sum_probs=25.3
Q ss_pred cccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCC
Q 024286 30 VVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRR 74 (269)
Q Consensus 30 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~ 74 (269)
..|.|+|.-|+|+ .+.+++.. ||.|+.+|...
T Consensus 251 ~vPmi~fakG~g~------------~Le~l~~t-G~DVvgLDWTv 282 (359)
T KOG2872|consen 251 PVPMILFAKGSGG------------ALEELAQT-GYDVVGLDWTV 282 (359)
T ss_pred CCceEEEEcCcch------------HHHHHHhc-CCcEEeecccc
Confidence 3489999999543 35688888 99999999774
No 257
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=53.54 E-value=11 Score=31.00 Aligned_cols=18 Identities=28% Similarity=0.517 Sum_probs=16.2
Q ss_pred EEeecCchHHHHHHHHHH
Q 024286 110 YLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~ 127 (269)
.|.|.|+||.+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 789999999999999864
No 258
>PRK10279 hypothetical protein; Provisional
Probab=53.37 E-value=19 Score=29.38 Aligned_cols=20 Identities=25% Similarity=0.052 Sum_probs=17.0
Q ss_pred cEEEeecCchHHHHHHHHHH
Q 024286 108 HIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~ 127 (269)
.-.|+|.|+|+.++..+|..
T Consensus 34 ~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred cCEEEEEcHHHHHHHHHHcC
Confidence 34899999999999988864
No 259
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=53.17 E-value=17 Score=30.85 Aligned_cols=98 Identities=15% Similarity=0.067 Sum_probs=62.9
Q ss_pred cccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC----------CCCCchhhHHHHHHHHHhccc
Q 024286 30 VVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN----------RYPCAYDDGWTVLKWAKSRSW 99 (269)
Q Consensus 30 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~----------~~~~~~~d~~~~~~~~~~~~~ 99 (269)
.+|+|++--|.+- ..+.. ..+ ...|. +-+=+.++||.+..+ ++.+...|..+.++-++..
T Consensus 62 drPtV~~T~GY~~-~~~p~---r~E-pt~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i-- 131 (448)
T PF05576_consen 62 DRPTVLYTEGYNV-STSPR---RSE-PTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI-- 131 (448)
T ss_pred CCCeEEEecCccc-ccCcc---ccc-hhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh--
Confidence 4588888888432 11111 122 22333 557788899987654 2334456777777777653
Q ss_pred ccCCCCCccEEEeecCchHHHHHHHHHHhhhccccccceeeeCCcc
Q 024286 100 LQSKDSKAHIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMF 145 (269)
Q Consensus 100 ~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~ 145 (269)
=+. +=+-.|.|=||..|+..=..+++. +.+.|......
T Consensus 132 ----Y~~-kWISTG~SKGGmTa~y~rrFyP~D---VD~tVaYVAP~ 169 (448)
T PF05576_consen 132 ----YPG-KWISTGGSKGGMTAVYYRRFYPDD---VDGTVAYVAPN 169 (448)
T ss_pred ----ccC-CceecCcCCCceeEEEEeeeCCCC---CCeeeeeeccc
Confidence 345 678889999999888776666665 88888875443
No 260
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=52.73 E-value=20 Score=29.34 Aligned_cols=32 Identities=22% Similarity=0.121 Sum_probs=23.5
Q ss_pred HHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHH
Q 024286 89 TVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~ 127 (269)
-+++.+.+.. +..+ .|+|.|+|+.++..++..
T Consensus 32 GvL~aLee~g----i~~d---~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 32 GVIKALEEAG----IPVD---MVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHHcC----CCCC---EEEEECHHHHHHHHHHcC
Confidence 3555565553 4444 899999999999999875
No 261
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=52.36 E-value=29 Score=30.31 Aligned_cols=61 Identities=15% Similarity=0.242 Sum_probs=41.4
Q ss_pred CceeEEecCCCcChhH--HHHHHHHHHH-----------------CC---------C-----CeEEEEeCCCceeeeeCC
Q 024286 203 PKSLVVVAGLDLIQDW--QLAYMEGLKK-----------------AG---------Q-----DVKLLYLEQATIGFYFLP 249 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~--~~~~~~~l~~-----------------~~---------~-----~~~~~~~~~~~H~~~~~~ 249 (269)
.++||..|+.|.+++. ++++.+.|+= .+ . +..+..+.++||..+
T Consensus 365 ikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp--- 441 (462)
T PTZ00472 365 VRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVP--- 441 (462)
T ss_pred ceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccCh---
Confidence 3899999999988764 2444444430 01 1 356667778888543
Q ss_pred CCchHHHHHHHHHHHhhc
Q 024286 250 NNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 250 ~~~~~~~~~~~i~~fl~~ 267 (269)
.+.++++.+.+.+|+..
T Consensus 442 -~d~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 442 -MDQPAVALTMINRFLRN 458 (462)
T ss_pred -hhHHHHHHHHHHHHHcC
Confidence 34678899999999874
No 262
>COG4425 Predicted membrane protein [Function unknown]
Probab=52.09 E-value=41 Score=29.04 Aligned_cols=80 Identities=18% Similarity=0.159 Sum_probs=43.7
Q ss_pred EEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCC-------CCCCCchh--hHHHHHHHHHhcccccCC
Q 024286 33 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE-------NRYPCAYD--DGWTVLKWAKSRSWLQSK 103 (269)
Q Consensus 33 ~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~-------~~~~~~~~--d~~~~~~~~~~~~~~~~~ 103 (269)
+|+.--|.||+-.. -..-.++|..- +++.+++.|...+. ..+..... =..+++.+...... -
T Consensus 324 vVv~~TGTGWIdp~-----a~~t~EyL~~G-d~asVsmQYSyL~SwLSllvdpdyg~~aa~aLf~aVy~yw~qLP~---~ 394 (588)
T COG4425 324 VVVTSTGTGWIDPA-----AADTLEYLYNG-DVASVSMQYSYLPSWLSLLVDPDYGADAARALFEAVYGYWTQLPK---S 394 (588)
T ss_pred EEEcCCCCCCCCHH-----HHhHHHHHhCC-ceEEEEEehhhHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhCCc---C
Confidence 34445677775221 13445566655 68888888885432 11221111 12334445544432 3
Q ss_pred CCCccEEEeecCchHHHHH
Q 024286 104 DSKAHIYLAGDSSGGNIVH 122 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg~la~ 122 (269)
... |++|.|-|.|++-..
T Consensus 395 sRP-KLylhG~SLGa~~s~ 412 (588)
T COG4425 395 SRP-KLYLHGESLGAMGSE 412 (588)
T ss_pred CCC-ceEEeccccccccCc
Confidence 444 899999999997443
No 263
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=51.13 E-value=22 Score=27.75 Aligned_cols=34 Identities=24% Similarity=0.104 Sum_probs=24.8
Q ss_pred HHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHh
Q 024286 90 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
+++.+.+.. +.++ .-.+.|-|+|+.+|..++...
T Consensus 17 Vl~~L~e~g----i~~~-~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 17 VLSLLIEAG----VINE-TTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHcC----CCCC-CCEEEEEcHHHHHHHHHHcCC
Confidence 556666653 3333 458999999999999998754
No 264
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=49.72 E-value=24 Score=28.29 Aligned_cols=31 Identities=16% Similarity=0.098 Sum_probs=22.3
Q ss_pred HHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHH
Q 024286 90 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~ 127 (269)
+++.+.+.. +..+ .+.|.|+|+.++..+|..
T Consensus 28 VL~aLeE~g----i~~d---~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEAG----IPID---AIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHcC----CCcc---EEEEECHHHHHHHHHHcC
Confidence 444554442 4444 899999999999999875
No 265
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=49.43 E-value=49 Score=27.26 Aligned_cols=60 Identities=12% Similarity=0.171 Sum_probs=42.4
Q ss_pred CceeEEecCCCcChhH--HHHHHHHHHHC---------------C-----CC-eEEEEeCCCceeeeeCCCCchHHHHHH
Q 024286 203 PKSLVVVAGLDLIQDW--QLAYMEGLKKA---------------G-----QD-VKLLYLEQATIGFYFLPNNGHFYTVMD 259 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~--~~~~~~~l~~~---------------~-----~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~ 259 (269)
.++||..|+.|.+++. ++.+.+.|+-. | .+ .++....++||.. +. .++.+++
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV---~~--qP~~al~ 308 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA---EY--RPNETFI 308 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCC---Cc--CHHHHHH
Confidence 3899999999988875 35555655411 1 12 5677777899954 22 5788999
Q ss_pred HHHHHhhc
Q 024286 260 EISNFVSC 267 (269)
Q Consensus 260 ~i~~fl~~ 267 (269)
.+.+||..
T Consensus 309 m~~~fi~~ 316 (319)
T PLN02213 309 MFQRWISG 316 (319)
T ss_pred HHHHHHcC
Confidence 99999875
No 266
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=48.93 E-value=43 Score=27.58 Aligned_cols=46 Identities=17% Similarity=0.326 Sum_probs=33.9
Q ss_pred CCCCccEEEeecCchHHHHHHHHHHhhh------ccccccceeeeCCccCCCC
Q 024286 103 KDSKAHIYLAGDSSGGNIVHHVALRAVE------SEVEILGNILLNPMFGGQE 149 (269)
Q Consensus 103 ~~~~~~i~l~G~S~Gg~la~~~a~~~~~------~~~~~~~~i~~~p~~~~~~ 149 (269)
.... +++|+.-|.||-+|..++..... -...+.++++--+|++..+
T Consensus 119 ~~t~-P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~D 170 (414)
T KOG1283|consen 119 FKTV-PLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPED 170 (414)
T ss_pred cccc-ceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChhH
Confidence 4555 89999999999999888765422 2245788888888876543
No 267
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=47.64 E-value=25 Score=26.27 Aligned_cols=20 Identities=30% Similarity=0.273 Sum_probs=17.4
Q ss_pred EEEeecCchHHHHHHHHHHh
Q 024286 109 IYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~~~ 128 (269)
=.+.|.|+||.+|..++...
T Consensus 29 d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 29 KRVAGTSAGAITAALLALGY 48 (194)
T ss_pred ceEEEECHHHHHHHHHHcCC
Confidence 48999999999999998753
No 268
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=47.37 E-value=26 Score=25.71 Aligned_cols=32 Identities=25% Similarity=0.186 Sum_probs=23.5
Q ss_pred HHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHh
Q 024286 90 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
+++.+.+.. +. .-.+.|-|+|+.+|..++...
T Consensus 16 vl~aL~e~g----i~---~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 16 VAKALRERG----PL---IDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHcC----CC---CCEEEEECHHHHHHHHHHcCC
Confidence 455665553 33 448999999999999998754
No 269
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=46.95 E-value=28 Score=29.72 Aligned_cols=60 Identities=13% Similarity=0.081 Sum_probs=38.0
Q ss_pred CCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCC-CchHHHHHHHHHHHh
Q 024286 202 FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPN-NGHFYTVMDEISNFV 265 (269)
Q Consensus 202 ~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~~~~~i~~fl 265 (269)
.+.+|+++|+.|+-... .| .+.....+....+.||++|+-....- .++..++...|.+|-
T Consensus 351 ~~rmlFVYG~nDPW~A~--~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAE--PF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred CCeEEEEeCCCCCcccC--cc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 34899999999975422 11 11222346677778999998554321 334567777787774
No 270
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=46.57 E-value=75 Score=25.13 Aligned_cols=53 Identities=15% Similarity=0.199 Sum_probs=38.1
Q ss_pred EEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcc
Q 024286 33 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRS 98 (269)
Q Consensus 33 ~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~ 98 (269)
-=++++| ..|+..++....++..++.. |..++-++ ...+.++.+.++.+.++.
T Consensus 53 nnvLL~G---~rGtGKSSlVkall~~y~~~-GLRlIev~---------k~~L~~l~~l~~~l~~~~ 105 (249)
T PF05673_consen 53 NNVLLWG---ARGTGKSSLVKALLNEYADQ-GLRLIEVS---------KEDLGDLPELLDLLRDRP 105 (249)
T ss_pred cceEEec---CCCCCHHHHHHHHHHHHhhc-CceEEEEC---------HHHhccHHHHHHHHhcCC
Confidence 3466688 44566677778888888888 99888765 345667777777777653
No 271
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=45.82 E-value=48 Score=28.84 Aligned_cols=61 Identities=11% Similarity=0.101 Sum_probs=41.3
Q ss_pred CceeEEecCCCcChhH--HHHHHHHHHHCC---------------------CCeEEEEeCCCceeeeeCCCCchHHHHHH
Q 024286 203 PKSLVVVAGLDLIQDW--QLAYMEGLKKAG---------------------QDVKLLYLEQATIGFYFLPNNGHFYTVMD 259 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~--~~~~~~~l~~~~---------------------~~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 259 (269)
-++||..|+.|.++|. ++.+.+.|.... ....+....|+||... ...++++..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP----~~~p~~al~ 439 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVP----YDKPESALI 439 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCC----CCCcHHHHH
Confidence 3899999999998875 355444443111 1245577779999653 334677888
Q ss_pred HHHHHhhc
Q 024286 260 EISNFVSC 267 (269)
Q Consensus 260 ~i~~fl~~ 267 (269)
.+..||..
T Consensus 440 m~~~fl~g 447 (454)
T KOG1282|consen 440 MFQRFLNG 447 (454)
T ss_pred HHHHHHcC
Confidence 89999875
No 272
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=44.92 E-value=24 Score=30.37 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=24.4
Q ss_pred HHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhh
Q 024286 89 TVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAV 129 (269)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~ 129 (269)
-+++.+.+.. +.++ .|.|.|+|+.+|..++.+..
T Consensus 90 GVLkaL~E~g----l~p~---vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 90 GVLKALFEAN----LLPR---IISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred HHHHHHHHcC----CCCC---EEEEECHHHHHHHHHHcCCH
Confidence 3555565553 3433 79999999999999988543
No 273
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.89 E-value=34 Score=26.45 Aligned_cols=21 Identities=19% Similarity=0.128 Sum_probs=17.4
Q ss_pred cEEEeecCchHHHHHHHHHHh
Q 024286 108 HIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~ 128 (269)
.-.+.|.|+|+.+|..++...
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 29 PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcCC
Confidence 346999999999999998643
No 274
>PRK10673 acyl-CoA esterase; Provisional
Probab=44.16 E-value=90 Score=24.10 Aligned_cols=61 Identities=7% Similarity=0.072 Sum_probs=33.6
Q ss_pred CCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhh
Q 024286 202 FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 266 (269)
Q Consensus 202 ~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~ 266 (269)
.||++++||--+..... ..+...+.+ ..+.+.++--||+....+..-...+..+++.++++
T Consensus 16 ~~~iv~lhG~~~~~~~~-~~~~~~l~~---~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 16 NSPIVLVHGLFGSLDNL-GVLARDLVN---DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLD 76 (255)
T ss_pred CCCEEEECCCCCchhHH-HHHHHHHhh---CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 35999999976653222 233344433 34556666566764322222234566667777765
No 275
>PLN02209 serine carboxypeptidase
Probab=44.09 E-value=70 Score=27.76 Aligned_cols=61 Identities=10% Similarity=0.074 Sum_probs=43.3
Q ss_pred CceeEEecCCCcChhH--HHHHHHHHHHCC--------------------CC-eEEEEeCCCceeeeeCCCCchHHHHHH
Q 024286 203 PKSLVVVAGLDLIQDW--QLAYMEGLKKAG--------------------QD-VKLLYLEQATIGFYFLPNNGHFYTVMD 259 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~--~~~~~~~l~~~~--------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~ 259 (269)
.++||..|+.|.+++. ++.+.+.|+-.+ .+ .++....++||.. +. +++++++
T Consensus 352 irVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmV---p~--qP~~al~ 426 (437)
T PLN02209 352 YRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTA---EY--LPEESSI 426 (437)
T ss_pred ceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCc---Cc--CHHHHHH
Confidence 3899999999988875 356666654111 12 6677778899954 22 6888999
Q ss_pred HHHHHhhcC
Q 024286 260 EISNFVSCN 268 (269)
Q Consensus 260 ~i~~fl~~~ 268 (269)
.+.+|+...
T Consensus 427 m~~~fi~~~ 435 (437)
T PLN02209 427 MFQRWISGQ 435 (437)
T ss_pred HHHHHHcCC
Confidence 999998753
No 276
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=43.79 E-value=17 Score=29.63 Aligned_cols=17 Identities=29% Similarity=0.589 Sum_probs=15.5
Q ss_pred EEeecCchHHHHHHHHH
Q 024286 110 YLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~ 126 (269)
.|.|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 68999999999999886
No 277
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=43.74 E-value=60 Score=28.15 Aligned_cols=61 Identities=11% Similarity=0.172 Sum_probs=42.8
Q ss_pred CceeEEecCCCcChhH--HHHHHHHHHHC---------------C-----CC-eEEEEeCCCceeeeeCCCCchHHHHHH
Q 024286 203 PKSLVVVAGLDLIQDW--QLAYMEGLKKA---------------G-----QD-VKLLYLEQATIGFYFLPNNGHFYTVMD 259 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~--~~~~~~~l~~~---------------~-----~~-~~~~~~~~~~H~~~~~~~~~~~~~~~~ 259 (269)
.++||..|+.|.+++. ++.+.+.|+-. | .+ .++....++||.. +. +++++++
T Consensus 348 irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmV---p~--qP~~al~ 422 (433)
T PLN03016 348 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTA---EY--RPNETFI 422 (433)
T ss_pred ceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCC---CC--CHHHHHH
Confidence 3899999999988874 35555555311 0 12 5677778899964 22 5788999
Q ss_pred HHHHHhhcC
Q 024286 260 EISNFVSCN 268 (269)
Q Consensus 260 ~i~~fl~~~ 268 (269)
.+.+||+..
T Consensus 423 m~~~Fi~~~ 431 (433)
T PLN03016 423 MFQRWISGQ 431 (433)
T ss_pred HHHHHHcCC
Confidence 999998753
No 278
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=43.43 E-value=36 Score=24.94 Aligned_cols=33 Identities=21% Similarity=0.078 Sum_probs=23.0
Q ss_pred HHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHh
Q 024286 89 TVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
-+++.+.+.. +. -=.+.|.|.|+.+|..++...
T Consensus 17 Gvl~~L~~~~----~~---~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 17 GVLKALEEAG----IP---IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHcC----CC---eeEEEEECHHHHHHHHHHcCC
Confidence 3455555542 23 348999999999999998653
No 279
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=43.16 E-value=44 Score=23.31 Aligned_cols=12 Identities=33% Similarity=0.800 Sum_probs=9.5
Q ss_pred CCCcccEEEEEcC
Q 024286 27 SEVVVPVIIFFHG 39 (269)
Q Consensus 27 ~~~~~p~vv~~HG 39 (269)
.+.| |.|+-+||
T Consensus 49 ~p~K-pLVlSfHG 60 (127)
T PF06309_consen 49 NPRK-PLVLSFHG 60 (127)
T ss_pred CCCC-CEEEEeec
Confidence 3344 99999999
No 280
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=42.94 E-value=1.8e+02 Score=23.64 Aligned_cols=40 Identities=18% Similarity=0.095 Sum_probs=24.5
Q ss_pred HHHHHHHHhcccccC---CCCCccEEEeecCchHHHHHHHHHH
Q 024286 88 WTVLKWAKSRSWLQS---KDSKAHIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 88 ~~~~~~~~~~~~~~~---~~~~~~i~l~G~S~Gg~la~~~a~~ 127 (269)
..+++.+.++..... +|....|=++-||+-|.|.....+.
T Consensus 103 dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~las 145 (366)
T KOG1532|consen 103 DQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLAS 145 (366)
T ss_pred HHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhh
Confidence 344455554444322 4444488899999988887765543
No 281
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=42.45 E-value=17 Score=30.90 Aligned_cols=60 Identities=15% Similarity=0.229 Sum_probs=38.2
Q ss_pred CceeEEecCCCcChhH--HHHHHHHHHH-------------CC---------CCeEEEEeCCCceeeeeCCCCchHHHHH
Q 024286 203 PKSLVVVAGLDLIQDW--QLAYMEGLKK-------------AG---------QDVKLLYLEQATIGFYFLPNNGHFYTVM 258 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~--~~~~~~~l~~-------------~~---------~~~~~~~~~~~~H~~~~~~~~~~~~~~~ 258 (269)
.++||.+|..|.+++. ++.+.+.+.- .+ .+..+..+.++||.... ..+++++
T Consensus 331 irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~----dqP~~a~ 406 (415)
T PF00450_consen 331 IRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQ----DQPEAAL 406 (415)
T ss_dssp -EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHH----HSHHHHH
T ss_pred ceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChh----hCHHHHH
Confidence 3899999999998875 3454444431 11 24568888899996543 3578888
Q ss_pred HHHHHHhh
Q 024286 259 DEISNFVS 266 (269)
Q Consensus 259 ~~i~~fl~ 266 (269)
..+.+||+
T Consensus 407 ~m~~~fl~ 414 (415)
T PF00450_consen 407 QMFRRFLK 414 (415)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 88999885
No 282
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=41.44 E-value=64 Score=22.15 Aligned_cols=13 Identities=31% Similarity=0.608 Sum_probs=9.9
Q ss_pred ccEEEEEcCCccc
Q 024286 31 VPVIIFFHGGSFA 43 (269)
Q Consensus 31 ~p~vv~~HGgg~~ 43 (269)
+.++|++||.-|.
T Consensus 56 ~klaIfVDGcfWH 68 (117)
T TIGR00632 56 YRCVIFIHGCFWH 68 (117)
T ss_pred CCEEEEEcccccc
Confidence 3699999996543
No 283
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=41.04 E-value=28 Score=23.50 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=23.7
Q ss_pred EEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeecc
Q 024286 34 IIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNY 72 (269)
Q Consensus 34 vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~ 72 (269)
||++.| ..|+.. ..+++.|++.+|+.++..|-
T Consensus 1 vI~I~G---~~gsGK----ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISG---PPGSGK----STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEE---STTSSH----HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEEC---CCCCCH----HHHHHHHHHHHCCeEEEecc
Confidence 577777 334443 57788899877999998886
No 284
>PLN02748 tRNA dimethylallyltransferase
Probab=40.92 E-value=98 Score=27.17 Aligned_cols=33 Identities=12% Similarity=0.256 Sum_probs=23.1
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeec
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
+.||+|-| ..|+.. ..++..|+...++.++..|
T Consensus 22 ~~~i~i~G---ptgsGK----s~la~~la~~~~~eii~~D 54 (468)
T PLN02748 22 AKVVVVMG---PTGSGK----SKLAVDLASHFPVEIINAD 54 (468)
T ss_pred CCEEEEEC---CCCCCH----HHHHHHHHHhcCeeEEcCc
Confidence 45677777 223333 5677788888788999999
No 285
>COG5045 Ribosomal protein S10E [Translation, ribosomal structure and biogenesis]
Probab=40.19 E-value=36 Score=21.92 Aligned_cols=58 Identities=12% Similarity=0.012 Sum_probs=40.0
Q ss_pred HHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCch
Q 024286 53 DILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSG 117 (269)
Q Consensus 53 ~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 117 (269)
...-++|.++ |..|..-|+-+.........--.+..+++-+.+.+. + + .++.++||.=
T Consensus 9 ~kIhq~Lf~~-gv~vakkDfnl~kH~el~ipNL~vika~qsl~S~GY---v--k-t~~~W~~~Yy 66 (105)
T COG5045 9 YKIHQRLFQK-GVAVAKKDFNLGKHRELEIPNLHVIKAMQSLISYGY---V--K-TIHVWRHSYY 66 (105)
T ss_pred HHHHHHHHHh-hhhHhhhhccccCCcccCCCchHHHHHHHHHhhcce---e--E-EEeeeeeeEE
Confidence 3455678887 888888887764444333333466778888888765 3 3 8999999974
No 286
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=40.11 E-value=57 Score=22.11 Aligned_cols=55 Identities=16% Similarity=0.106 Sum_probs=32.2
Q ss_pred EEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHh
Q 024286 35 IFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKS 96 (269)
Q Consensus 35 v~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~ 96 (269)
|++|| -.|.. -..+++.+++..|+.++.++...............+...++.+.+
T Consensus 1 ill~G---~~G~G----KT~l~~~la~~l~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~ 55 (132)
T PF00004_consen 1 ILLHG---PPGTG----KTTLARALAQYLGFPFIEIDGSELISSYAGDSEQKIRDFFKKAKK 55 (132)
T ss_dssp EEEES---STTSS----HHHHHHHHHHHTTSEEEEEETTHHHTSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEC---cCCCC----eeHHHHHHHhhcccccccccccccccccccccccccccccccccc
Confidence 57888 22333 357788888888999988885533322223333444455544433
No 287
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=39.68 E-value=44 Score=26.36 Aligned_cols=18 Identities=17% Similarity=0.222 Sum_probs=16.1
Q ss_pred EeecCchHHHHHHHHHHh
Q 024286 111 LAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 111 l~G~S~Gg~la~~~a~~~ 128 (269)
+.|-|+|+.+|..++...
T Consensus 34 i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 34 ISGASAGALAACCLLCDL 51 (245)
T ss_pred EEEEcHHHHHHHHHHhCC
Confidence 999999999999988754
No 288
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=39.46 E-value=23 Score=26.09 Aligned_cols=21 Identities=24% Similarity=0.090 Sum_probs=17.9
Q ss_pred cEEEeecCchHHHHHHHHHHh
Q 024286 108 HIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~ 128 (269)
-=.+.|.|+|+.+|..++...
T Consensus 29 ~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 29 IDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred eeEEEEeCHHHHHHHHHHcCC
Confidence 348999999999999988754
No 289
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=39.06 E-value=23 Score=29.51 Aligned_cols=18 Identities=33% Similarity=0.601 Sum_probs=16.2
Q ss_pred EEeecCchHHHHHHHHHH
Q 024286 110 YLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~ 127 (269)
.+.|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 789999999999999863
No 290
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=38.68 E-value=1.2e+02 Score=25.06 Aligned_cols=62 Identities=10% Similarity=0.027 Sum_probs=33.5
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCC--CCchHHHHHHHHHHHhh
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLP--NNGHFYTVMDEISNFVS 266 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~i~~fl~ 266 (269)
++++++||-.......-..+...+.+.|-. .+.++--||+..-.+ .....+...+++.++++
T Consensus 88 ~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~--v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~ 151 (349)
T PLN02385 88 AAVCFCHGYGDTCTFFFEGIARKIASSGYG--VFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYS 151 (349)
T ss_pred eEEEEECCCCCccchHHHHHHHHHHhCCCE--EEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 479999998654321113445666665544 455555567643211 11234566667766654
No 291
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=38.06 E-value=1.5e+02 Score=22.89 Aligned_cols=62 Identities=21% Similarity=0.313 Sum_probs=29.8
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCC----chHHHHHHHHHHHhh
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNN----GHFYTVMDEISNFVS 266 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~----~~~~~~~~~i~~fl~ 266 (269)
+|++++||.-......-..+...+.+.+..+ +.++--||+....+.. -..+...+.+..+++
T Consensus 26 ~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~v--i~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 91 (288)
T TIGR01250 26 IKLLLLHGGPGMSHEYLENLRELLKEEGREV--IMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVRE 91 (288)
T ss_pred CeEEEEcCCCCccHHHHHHHHHHHHhcCCEE--EEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHH
Confidence 5899999964322222233445555544444 4444445543221111 123455555655554
No 292
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=37.40 E-value=38 Score=29.07 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=24.3
Q ss_pred HHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhh
Q 024286 89 TVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAV 129 (269)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~ 129 (269)
-+++.+.+.. +.++ +|.|.|+|+.+|..++.+..
T Consensus 84 GVlkaL~e~g----llp~---iI~GtSAGAivaalla~~t~ 117 (407)
T cd07232 84 GVVKALLDAD----LLPN---VISGTSGGSLVAALLCTRTD 117 (407)
T ss_pred HHHHHHHhCC----CCCC---EEEEECHHHHHHHHHHcCCH
Confidence 4555565553 3333 69999999999999998543
No 293
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=36.89 E-value=22 Score=29.09 Aligned_cols=17 Identities=29% Similarity=0.481 Sum_probs=15.3
Q ss_pred EEeecCchHHHHHHHHH
Q 024286 110 YLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~ 126 (269)
.|+|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 78999999999998874
No 294
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=36.64 E-value=50 Score=25.39 Aligned_cols=41 Identities=15% Similarity=0.163 Sum_probs=22.8
Q ss_pred ccEEEEEcCCccccCCCCchhhH-HHHHHHhhcCCCEEEeeccCCC
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYD-ILCRRLVGTCKAVVVSVNYRRA 75 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~-~~~~~l~~~~g~~v~~~d~r~~ 75 (269)
.+.|.||.=.+ .......|. .....|... |+.+..++....
T Consensus 32 ~~~i~FIPtAs---~~~~~~~Yv~k~~~~l~~l-g~~v~~L~l~~~ 73 (224)
T COG3340 32 RKTIAFIPTAS---VDSEDDFYVEKVRNALAKL-GLEVSELHLSKP 73 (224)
T ss_pred CceEEEEecCc---cccchHHHHHHHHHHHHHc-CCeeeeeeccCC
Confidence 47899998532 222221133 333444444 999988875543
No 295
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=36.40 E-value=3.4e+02 Score=24.86 Aligned_cols=40 Identities=18% Similarity=0.178 Sum_probs=31.2
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCCccCCCC
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNPMFGGQE 149 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p~~~~~~ 149 (269)
.++-.+.|-||.-++..|-+ +....|.|++..-|.+....
T Consensus 286 ~VIAssvSNGGgAal~AAEq--D~~glIdgVvv~EP~v~~~~ 325 (690)
T PF10605_consen 286 LVIASSVSNGGGAALAAAEQ--DTQGLIDGVVVSEPNVNLPP 325 (690)
T ss_pred EEEEEeecCccHHHHhHhhc--ccCCceeeEEecCCccCCCC
Confidence 34555899999999988876 34467999999999887664
No 296
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=36.04 E-value=29 Score=28.06 Aligned_cols=19 Identities=37% Similarity=0.424 Sum_probs=16.8
Q ss_pred EEeecCchHHHHHHHHHHh
Q 024286 110 YLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~~ 128 (269)
.+.|.|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 8899999999999998653
No 297
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=35.42 E-value=2e+02 Score=23.61 Aligned_cols=64 Identities=14% Similarity=0.006 Sum_probs=40.5
Q ss_pred ceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 204 KSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 204 P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
-++++||-....--.=..++.++...|-.+--.-++|.|+.--.....+....+.+++.+|+++
T Consensus 56 lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~ 119 (313)
T KOG1455|consen 56 LVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDS 119 (313)
T ss_pred EEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHH
Confidence 4788888655431111456678888877665566655544432223355678899999999874
No 298
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=35.25 E-value=1.1e+02 Score=25.17 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=22.9
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeec
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
|-+++|-| -+. +. -..++-.||++.|..|++.|
T Consensus 3 ~~~i~I~G--PTA-sG----KT~lai~LAk~~~~eIIs~D 35 (308)
T COG0324 3 PKLIVIAG--PTA-SG----KTALAIALAKRLGGEIISLD 35 (308)
T ss_pred ccEEEEEC--CCC-cC----HHHHHHHHHHHcCCcEEecc
Confidence 45666666 222 22 35677789998899999999
No 299
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=35.10 E-value=30 Score=26.59 Aligned_cols=32 Identities=22% Similarity=0.071 Sum_probs=23.0
Q ss_pred HHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHh
Q 024286 90 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~ 128 (269)
+++.+.+.. +. -=.+.|.|+|+.+|..++...
T Consensus 16 vl~aL~e~g----~~---~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 16 VLKALAEAG----IE---PDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHcC----CC---CCEEEEECHHHHHHHHHHcCC
Confidence 445555542 33 348999999999999998754
No 300
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=34.27 E-value=35 Score=24.97 Aligned_cols=20 Identities=25% Similarity=0.247 Sum_probs=16.5
Q ss_pred cEEEeecCchHHHHHHHHHH
Q 024286 108 HIYLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~ 127 (269)
--.|.|-|.||.+|+.++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 45799999999999888765
No 301
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=34.01 E-value=29 Score=29.00 Aligned_cols=17 Identities=35% Similarity=0.544 Sum_probs=15.8
Q ss_pred EEeecCchHHHHHHHHH
Q 024286 110 YLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~ 126 (269)
.|.|.|.||.+|+.++.
T Consensus 46 liaGTStGgiiA~~la~ 62 (349)
T cd07214 46 VIAGTSTGGLITAMLTA 62 (349)
T ss_pred EEeeCCHHHHHHHHHhc
Confidence 78999999999999986
No 302
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=33.88 E-value=79 Score=22.31 Aligned_cols=21 Identities=24% Similarity=0.077 Sum_probs=15.2
Q ss_pred HHHHHHHhhcCCCEEEeeccC
Q 024286 53 DILCRRLVGTCKAVVVSVNYR 73 (269)
Q Consensus 53 ~~~~~~l~~~~g~~v~~~d~r 73 (269)
...+..++...||.|..+|-|
T Consensus 10 a~al~~la~~lg~~v~v~d~r 30 (136)
T PF13478_consen 10 ARALARLAALLGFRVTVVDPR 30 (136)
T ss_dssp HHHHHHHHHHCTEEEEEEES-
T ss_pred HHHHHHHHHhCCCEEEEEcCC
Confidence 344556666679999999988
No 303
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=33.85 E-value=1.6e+02 Score=22.47 Aligned_cols=60 Identities=23% Similarity=0.191 Sum_probs=33.8
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
||++++||--...... ..+...++ +.+++.++--||+....+.....++..+.+.+++++
T Consensus 3 p~vvllHG~~~~~~~w-~~~~~~l~----~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~ 62 (242)
T PRK11126 3 PWLVFLHGLLGSGQDW-QPVGEALP----DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQS 62 (242)
T ss_pred CEEEEECCCCCChHHH-HHHHHHcC----CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHH
Confidence 5799999986654433 23334442 245555555556543222223456677777777754
No 304
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=33.85 E-value=34 Score=27.23 Aligned_cols=19 Identities=16% Similarity=0.051 Sum_probs=17.1
Q ss_pred EEeecCchHHHHHHHHHHh
Q 024286 110 YLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~~ 128 (269)
.+.|.|+|+.+|..++...
T Consensus 30 ~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred EEEEECHHHHhHHHHHhCC
Confidence 8999999999999988764
No 305
>PLN02200 adenylate kinase family protein
Probab=33.52 E-value=90 Score=24.39 Aligned_cols=45 Identities=31% Similarity=0.417 Sum_probs=28.9
Q ss_pred ccccccCC-CCCcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEee
Q 024286 19 AELEKPVS-SEVVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSV 70 (269)
Q Consensus 19 ~~~~~p~~-~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~ 70 (269)
+.+..+.. .+.+.|.+|++.|.. |+.. ..+++.|++++|+..+..
T Consensus 29 ~~~~~~~~~~~~~~~~ii~I~G~P---GSGK----sT~a~~La~~~g~~his~ 74 (234)
T PLN02200 29 ITLEERGSSSKEKTPFITFVLGGP---GSGK----GTQCEKIVETFGFKHLSA 74 (234)
T ss_pred cccccccCCccCCCCEEEEEECCC---CCCH----HHHHHHHHHHhCCeEEEc
Confidence 34444433 344458999999933 3433 566788888878877766
No 306
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=33.48 E-value=54 Score=28.27 Aligned_cols=54 Identities=9% Similarity=0.030 Sum_probs=28.5
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHH
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEI 261 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i 261 (269)
..+++.+|+.|+=..-+ ........+..++++|+.|+..+.+..+.-.+.+...
T Consensus 377 tnviFtNG~~DPW~~lg-----v~~~~~~~~~~~~I~g~~Hc~Dl~~~~~~D~~~l~~a 430 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG-----VTSDSSDSVPAIVIPGGAHCSDLYPPNPNDPPELKAA 430 (434)
T ss_dssp -SEEEEEETT-CCGGGS-------S-SSSSEEEEEETT--TTGGGS---TT--HHHHHH
T ss_pred CeEEeeCCCCCCccccc-----CCCCCCCCcccEEECCCeeeccccCCCCCCCHHHHHH
Confidence 37999999999765433 1122345566788999999987764433333333333
No 307
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=33.03 E-value=30 Score=27.35 Aligned_cols=18 Identities=44% Similarity=0.628 Sum_probs=16.3
Q ss_pred EEeecCchHHHHHHHHHH
Q 024286 110 YLAGDSSGGNIVHHVALR 127 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~ 127 (269)
.+.|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 689999999999999876
No 308
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=32.89 E-value=61 Score=26.48 Aligned_cols=21 Identities=24% Similarity=0.180 Sum_probs=18.3
Q ss_pred cEEEeecCchHHHHHHHHHHh
Q 024286 108 HIYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~ 128 (269)
.-.|.|.|||+.++..+|...
T Consensus 40 ~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 40 IDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred ccEEEecCHHHHHHHHHHcCC
Confidence 458999999999999998854
No 309
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=32.88 E-value=68 Score=25.66 Aligned_cols=39 Identities=5% Similarity=0.070 Sum_probs=26.0
Q ss_pred cccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeecc
Q 024286 30 VVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNY 72 (269)
Q Consensus 30 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~ 72 (269)
+.|+||++.| +-++........+...|--+ |+.|.++.-
T Consensus 54 ~~~vlIv~eG---~DaAGKG~~I~~l~~~lDPR-g~~V~s~~~ 92 (264)
T TIGR03709 54 RRSLLLVLQA---MDAAGKDGTIRHVMSGVNPQ-GCQVTSFKA 92 (264)
T ss_pred CCcEEEEEEC---CCCCCchHHHHHHHHhcCCC-eeEEEeCCC
Confidence 4599999999 33344444455555555556 999998853
No 310
>PRK13703 conjugal pilus assembly protein TraF; Provisional
Probab=32.70 E-value=1.3e+02 Score=23.90 Aligned_cols=51 Identities=16% Similarity=0.136 Sum_probs=34.3
Q ss_pred EEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhH
Q 024286 33 VIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDG 87 (269)
Q Consensus 33 ~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~ 87 (269)
.++|+..|.. ..-+.+.+.++.|+.++|+.|+.++.-+.+...++....|.
T Consensus 146 GL~fFy~s~C----p~C~~~aPil~~fa~~yg~~v~~VS~DG~~~p~fp~~~~d~ 196 (248)
T PRK13703 146 GLMFFYRGQD----PIDGQLAQVINDFRDTYGLSVIPVSVDGVINPLLPDSRTDQ 196 (248)
T ss_pred eEEEEECCCC----chhHHHHHHHHHHHHHhCCeEEEEecCCCCCCCCCCCccCh
Confidence 4555555442 22233788899999999999988887776665666654444
No 311
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=32.56 E-value=2.7e+02 Score=22.61 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=25.2
Q ss_pred ccEEEEEcCCccccCCCCc--hhhHHHHHHHhhcCCCEEEee
Q 024286 31 VPVIIFFHGGSFAHSSANS--AIYDILCRRLVGTCKAVVVSV 70 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~--~~~~~~~~~l~~~~g~~v~~~ 70 (269)
.|.|++.||+++. .+.+ +.|..+++.|.++ |+.++..
T Consensus 179 ~~~i~i~~gas~~--~K~wp~e~~~~l~~~l~~~-~~~~vl~ 217 (319)
T TIGR02193 179 APYAVLLHATSRD--DKTWPEERWRELARLLLAR-GLQIVLP 217 (319)
T ss_pred CCEEEEEeCCCcc--cCCCCHHHHHHHHHHHHHC-CCeEEEe
Confidence 3789999997753 3332 3467778888776 8876644
No 312
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=32.54 E-value=1.9e+02 Score=21.25 Aligned_cols=65 Identities=14% Similarity=0.115 Sum_probs=39.5
Q ss_pred ceeEEecCCCcChh-HHHHHHHHHHHCCCCeEEEEeCCC-----cee-eeeCCCCchHHHHHHHHHHHhhcC
Q 024286 204 KSLVVVAGLDLIQD-WQLAYMEGLKKAGQDVKLLYLEQA-----TIG-FYFLPNNGHFYTVMDEISNFVSCN 268 (269)
Q Consensus 204 P~li~~G~~D~~~~-~~~~~~~~l~~~~~~~~~~~~~~~-----~H~-~~~~~~~~~~~~~~~~i~~fl~~~ 268 (269)
.+||++++.|--.. .+...+..|++.|.+|++.-.... +|- -.....+-...+..+.+.+|+++|
T Consensus 2 k~LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~dl~~~~~~~l~~ydavVIgAsI~~~h~~~~~~~Fv~k~ 73 (175)
T COG4635 2 KTLILYSTRDGQTRKIAEYIASHLRESGIQVDIQDLHAVEEPALEDYDAVVIGASIRYGHFHEAVQSFVKKH 73 (175)
T ss_pred ceEEEEecCCCcHHHHHHHHHHHhhhcCCeeeeeehhhhhccChhhCceEEEecchhhhhhHHHHHHHHHHH
Confidence 58999999996543 356777889988877777654321 110 001112233456666777777764
No 313
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=31.70 E-value=18 Score=31.50 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=20.5
Q ss_pred cEEEeecCchHHHHHHHHHHhhhc
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVES 131 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~ 131 (269)
+=+|.|.|+||.+|..++.+..++
T Consensus 203 P~IIsGsS~GaivAsl~~v~~~eE 226 (543)
T KOG2214|consen 203 PNIISGSSAGAIVASLVGVRSNEE 226 (543)
T ss_pred chhhcCCchhHHHHHHHhhcchHH
Confidence 558999999999999999887554
No 314
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=31.65 E-value=29 Score=27.60 Aligned_cols=15 Identities=33% Similarity=0.410 Sum_probs=12.4
Q ss_pred CCCccEEEeecCchHH
Q 024286 104 DSKAHIYLAGDSSGGN 119 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg~ 119 (269)
+.+ .|.++|||+|..
T Consensus 233 ~i~-~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DID-EIIIYGHSLGEV 247 (270)
T ss_pred CCC-EEEEEeCCCchh
Confidence 345 999999999974
No 315
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=31.47 E-value=35 Score=28.26 Aligned_cols=17 Identities=29% Similarity=0.407 Sum_probs=14.8
Q ss_pred EEeecCchHHHHHHHHH
Q 024286 110 YLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~ 126 (269)
.|+|.|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 78999999999988763
No 316
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=31.33 E-value=1.1e+02 Score=25.04 Aligned_cols=43 Identities=14% Similarity=0.232 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhh
Q 024286 85 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAV 129 (269)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~ 129 (269)
..+.+-++|.+.....- ..|+ ++.++|-|.|=.+|..+++...
T Consensus 22 ~nV~~QI~y~k~~gp~~-ngPK-kVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 22 ANVLQQIDYVKAAGPIK-NGPK-KVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHHHHHHHhcCCcc-CCCc-eEEEEecCCcccHHHHHHHHhC
Confidence 35677788888765421 3678 9999999999999998887653
No 317
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=30.75 E-value=52 Score=28.00 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=24.1
Q ss_pred HHHHHHhcccccCCCCCccEEEeecCchHHHHHHHHHHhhh
Q 024286 90 VLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHVALRAVE 130 (269)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~a~~~~~ 130 (269)
+++.+.+.. +-++ +|.|.|+|+.+|..+|....+
T Consensus 101 v~kaL~e~g----l~p~---~i~GtS~Gaivaa~~a~~~~~ 134 (391)
T cd07229 101 VVKALWLRG----LLPR---IITGTATGALIAALVGVHTDE 134 (391)
T ss_pred HHHHHHHcC----CCCc---eEEEecHHHHHHHHHHcCCHH
Confidence 445555553 3433 699999999999999985433
No 318
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=30.64 E-value=3e+02 Score=22.48 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=23.5
Q ss_pred cEEEEEcCCccccCCCC--chhhHHHHHHHhhcCCCEEEe
Q 024286 32 PVIIFFHGGSFAHSSAN--SAIYDILCRRLVGTCKAVVVS 69 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~--~~~~~~~~~~l~~~~g~~v~~ 69 (269)
|.|+++||+++. ... .+.|...++.+.++ |+.++.
T Consensus 179 ~~i~~~~~~s~~--~k~Wp~e~~a~li~~l~~~-~~~ivl 215 (322)
T PRK10964 179 PYLVFLHATTRD--DKHWPEAHWRELIGLLAPS-GLRIKL 215 (322)
T ss_pred CeEEEEeCCCcc--cccCCHHHHHHHHHHHHHC-CCeEEE
Confidence 678889997652 233 22467778888766 887764
No 319
>COG3101 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.55 E-value=41 Score=23.80 Aligned_cols=20 Identities=35% Similarity=0.522 Sum_probs=17.7
Q ss_pred cccccCCCCCcccEEEEEcC
Q 024286 20 ELEKPVSSEVVVPVIIFFHG 39 (269)
Q Consensus 20 ~~~~p~~~~~~~p~vv~~HG 39 (269)
.+|.|++...++..|+|.||
T Consensus 31 PiYlPAde~vpyhri~FA~G 50 (180)
T COG3101 31 PIYLPADEEVPYHRIVFAHG 50 (180)
T ss_pred ceeccCccCCCceeEEEech
Confidence 57899998887789999999
No 320
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=30.40 E-value=1.8e+02 Score=24.29 Aligned_cols=20 Identities=40% Similarity=0.466 Sum_probs=13.7
Q ss_pred cEEEeecCchHHHHH--HHHHH
Q 024286 108 HIYLAGDSSGGNIVH--HVALR 127 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~--~~a~~ 127 (269)
.=.++|.|.|++.+. .+|.+
T Consensus 304 eGll~G~SSGan~~aAl~~a~~ 325 (362)
T KOG1252|consen 304 EGLLVGISSGANVAAALKLAKR 325 (362)
T ss_pred hCeeecccchHHHHHHHHHHhc
Confidence 457889999998763 44443
No 321
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=29.93 E-value=1.5e+02 Score=24.17 Aligned_cols=61 Identities=18% Similarity=0.152 Sum_probs=39.1
Q ss_pred ceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeee---CCCCchHHHHHHHHHHHhhc
Q 024286 204 KSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYF---LPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 204 P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~---~~~~~~~~~~~~~i~~fl~~ 267 (269)
-++++||..|...-. ..++..+...|-.+ ..++=-||+..- -......+.+..++..|++.
T Consensus 36 ~Vvl~HG~~Eh~~ry-~~la~~l~~~G~~V--~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~ 99 (298)
T COG2267 36 VVVLVHGLGEHSGRY-EELADDLAARGFDV--YALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVET 99 (298)
T ss_pred EEEEecCchHHHHHH-HHHHHHHHhCCCEE--EEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHH
Confidence 489999999976443 34667788777654 445545666442 22344467777777777763
No 322
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.37 E-value=1.6e+02 Score=26.12 Aligned_cols=40 Identities=20% Similarity=0.229 Sum_probs=27.1
Q ss_pred CCCccEEEeecCchHHHHHHHHHHhhh--ccccccceeeeCCc
Q 024286 104 DSKAHIYLAGDSSGGNIVHHVALRAVE--SEVEILGNILLNPM 144 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg~la~~~a~~~~~--~~~~~~~~i~~~p~ 144 (269)
... +|.|+|+|.|+-+....+....+ ...-+.-++++...
T Consensus 445 G~R-PVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaP 486 (633)
T KOG2385|consen 445 GNR-PVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAP 486 (633)
T ss_pred CCC-ceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCC
Confidence 455 99999999999887655444333 22446777877533
No 323
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=29.10 E-value=87 Score=21.45 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=24.0
Q ss_pred hhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHH
Q 024286 84 YDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIV 121 (269)
Q Consensus 84 ~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la 121 (269)
..+....+.|.... .+.+ .|+++|||--|++.
T Consensus 42 ~~~~~~sl~~av~~-----l~v~-~ivV~gHt~CG~v~ 73 (119)
T cd00382 42 DLDVLASLEYAVEV-----LGVK-HIIVCGHTDCGAVK 73 (119)
T ss_pred cccHHHHHHHHHHh-----hCCC-EEEEEccCCCcHHH
Confidence 34678888888777 5666 99999997666544
No 324
>PLN02840 tRNA dimethylallyltransferase
Probab=28.76 E-value=1.8e+02 Score=25.14 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=22.1
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeec
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
+.++.|-| ..|+. -..++..|+.+.+..++..|
T Consensus 21 ~~vi~I~G---ptgsG----KTtla~~La~~~~~~iis~D 53 (421)
T PLN02840 21 EKVIVISG---PTGAG----KSRLALELAKRLNGEIISAD 53 (421)
T ss_pred CeEEEEEC---CCCCC----HHHHHHHHHHHCCCCeEecc
Confidence 45667766 22233 35677788887787888888
No 325
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=28.61 E-value=2.8e+02 Score=21.84 Aligned_cols=60 Identities=12% Similarity=0.153 Sum_probs=33.5
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCC-CchHHHHHHHHHHHhh
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPN-NGHFYTVMDEISNFVS 266 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~~~~~~i~~fl~ 266 (269)
+|++++||--+..... ..+.+.+ ....+.+.++--||+..-.+. ....+...+.+.++++
T Consensus 26 ~plvllHG~~~~~~~w-~~~~~~L---~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~ 86 (276)
T TIGR02240 26 TPLLIFNGIGANLELV-FPFIEAL---DPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLD 86 (276)
T ss_pred CcEEEEeCCCcchHHH-HHHHHHh---ccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHH
Confidence 5999999976543222 1222333 334577777777887542211 1124555566666665
No 326
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=28.36 E-value=1.5e+02 Score=25.32 Aligned_cols=61 Identities=10% Similarity=0.050 Sum_probs=32.8
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCC--CCchHHHHHHHHHHHhh
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLP--NNGHFYTVMDEISNFVS 266 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~i~~fl~ 266 (269)
++++++||-.+..... ..+++.+.+.+- ..+.++-.||+..-.. .....+...+++.++++
T Consensus 137 ~~Vl~lHG~~~~~~~~-~~~a~~L~~~Gy--~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~ 199 (395)
T PLN02652 137 GILIIIHGLNEHSGRY-LHFAKQLTSCGF--GVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLE 199 (395)
T ss_pred eEEEEECCchHHHHHH-HHHHHHHHHCCC--EEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 4799999987653222 355667766654 4455555566532111 11233444555555544
No 327
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=28.13 E-value=2.6e+02 Score=20.88 Aligned_cols=59 Identities=8% Similarity=-0.094 Sum_probs=29.9
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHh
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFV 265 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl 265 (269)
+|++++||--...... ..+...+. ...+.+.++-.||+..........++..+.+.+.+
T Consensus 5 ~~iv~~HG~~~~~~~~-~~~~~~l~---~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 63 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVF-RCLDEELS---AHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA 63 (245)
T ss_pred ceEEEEcCCCCchhhH-HHHHHhhc---cCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC
Confidence 5899999975542222 23333443 23566666666666432111223445555555444
No 328
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=28.05 E-value=98 Score=24.01 Aligned_cols=39 Identities=23% Similarity=0.174 Sum_probs=21.5
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEee
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSV 70 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~ 70 (269)
.+.|++.+|+++..-.-..+.|..+++.|.+. ++.|+.+
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~-~~~vvl~ 143 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKER-GYRVVLL 143 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCC-T-EEEE-
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhh-CceEEEE
Confidence 38999999977632121233467778888877 7777654
No 329
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=28.03 E-value=3.1e+02 Score=21.78 Aligned_cols=39 Identities=26% Similarity=0.304 Sum_probs=23.7
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeec
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
+.|++..|+++..-.-....|..+++.|..+ |+.++.+-
T Consensus 122 ~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~-~~~ivl~g 160 (279)
T cd03789 122 PVVVLPPGASGPAKRWPAERFAALADRLLAR-GARVVLTG 160 (279)
T ss_pred CEEEECCCCCCccccCCHHHHHHHHHHHHHC-CCEEEEEe
Confidence 5666655544322222234577888888887 88887653
No 330
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=27.78 E-value=61 Score=26.58 Aligned_cols=53 Identities=21% Similarity=0.186 Sum_probs=29.3
Q ss_pred ceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 204 KSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 204 P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
--.++.|..+. ...+.+.+++.+..++......+-| ++..+.+.+.+.++++.
T Consensus 157 ~q~visG~~~~----l~~~~~~l~~~~~~~~~l~v~~afH-------s~~m~~~~~~~~~~l~~ 209 (318)
T PF00698_consen 157 RQVVISGEREA----LEALVERLKAEGIKAKRLPVSYAFH-------SPLMEPAADEFREALES 209 (318)
T ss_dssp TEEEEEEEHHH----HHHHHHHHHHTTSEEEEESSSSETT-------SGGGHHHHHHHHHHHHT
T ss_pred cccccCCCHHH----HHHHHHHhhccceeEEEeeeecccc-------CchhhhhHHHHHhhhhc
Confidence 45666666544 2455677777775444443444344 33455566666666653
No 331
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=27.51 E-value=1.7e+02 Score=18.48 Aligned_cols=35 Identities=14% Similarity=0.153 Sum_probs=17.5
Q ss_pred CCceeEEecCCCcChhHH------HHHHHHHHHCCCCeEEE
Q 024286 202 FPKSLVVVAGLDLIQDWQ------LAYMEGLKKAGQDVKLL 236 (269)
Q Consensus 202 ~~P~li~~G~~D~~~~~~------~~~~~~l~~~~~~~~~~ 236 (269)
.||++++++.+...++.+ ..+.+.+.-.|.++++.
T Consensus 38 ~PPtFv~f~N~~~~~~~sY~ryL~n~lRe~f~f~G~Pi~l~ 78 (80)
T PF14714_consen 38 RPPTFVLFVNDPELLPESYKRYLENQLREAFGFEGVPIRLI 78 (80)
T ss_dssp TTTEEEEEES-CCC--HHHHHHHHHHHHHHH--TTS--EEE
T ss_pred CCCEEEEEeCCcccCCHHHHHHHHHHHHHHCCCCceeEEEE
Confidence 579999999987766653 33333443345555443
No 332
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=27.43 E-value=63 Score=26.44 Aligned_cols=94 Identities=15% Similarity=0.075 Sum_probs=47.2
Q ss_pred EEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCC--C------CCC-CchhhHHHHHHHHHhcccccC-CC
Q 024286 35 IFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPE--N------RYP-CAYDDGWTVLKWAKSRSWLQS-KD 104 (269)
Q Consensus 35 v~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~--~------~~~-~~~~d~~~~~~~~~~~~~~~~-~~ 104 (269)
|++-||...+|| ..+..|.+. ||.|+.+|--..+. . .+. ..+.|-...-+.+.+. .... ++
T Consensus 3 iLVtGGAGYIGS-------Htv~~Ll~~-G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~-~idaViH 73 (329)
T COG1087 3 VLVTGGAGYIGS-------HTVRQLLKT-GHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEEN-KIDAVVH 73 (329)
T ss_pred EEEecCcchhHH-------HHHHHHHHC-CCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhc-CCCEEEE
Confidence 445555444554 345577777 99999999432211 1 111 1233333333333332 1111 23
Q ss_pred CCccEEEeecCc-----------hHHHHHHHHHHhhhccccccceeeeC
Q 024286 105 SKAHIYLAGDSS-----------GGNIVHHVALRAVESEVEILGNILLN 142 (269)
Q Consensus 105 ~~~~i~l~G~S~-----------Gg~la~~~a~~~~~~~~~~~~~i~~~ 142 (269)
.. -...+|-|+ +|.+.+.-+++... ++.+|..|
T Consensus 74 FA-a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g----v~~~vFSS 117 (329)
T COG1087 74 FA-ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG----VKKFIFSS 117 (329)
T ss_pred Cc-cccccchhhhCHHHHHhhchHhHHHHHHHHHHhC----CCEEEEec
Confidence 33 344566665 68888877776422 55555554
No 333
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=27.26 E-value=2.7e+02 Score=22.18 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=33.9
Q ss_pred CCceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCC--CCchHHHHHHHHHHHhhc
Q 024286 202 FPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLP--NNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 202 ~~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~--~~~~~~~~~~~i~~fl~~ 267 (269)
.|+++++||--...-.. ..+...|.+.+-++-...++ ||+..... .....+...+.+.+++++
T Consensus 18 ~p~vvliHG~~~~~~~w-~~~~~~L~~~g~~vi~~dl~--g~G~s~~~~~~~~~~~~~~~~l~~~i~~ 82 (273)
T PLN02211 18 PPHFVLIHGISGGSWCW-YKIRCLMENSGYKVTCIDLK--SAGIDQSDADSVTTFDEYNKPLIDFLSS 82 (273)
T ss_pred CCeEEEECCCCCCcCcH-HHHHHHHHhCCCEEEEeccc--CCCCCCCCcccCCCHHHHHHHHHHHHHh
Confidence 45799999976543222 33445666655555444444 56532110 012345666677777653
No 334
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=27.01 E-value=2.6e+02 Score=21.90 Aligned_cols=17 Identities=24% Similarity=0.206 Sum_probs=13.4
Q ss_pred cEEEeecCchHHHHHHH
Q 024286 108 HIYLAGDSSGGNIVHHV 124 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~ 124 (269)
...++|.|+|+.++...
T Consensus 113 G~~~~G~SAGAii~~~~ 129 (233)
T PRK05282 113 GTPYIGWSAGANVAGPT 129 (233)
T ss_pred CCEEEEECHHHHhhhcc
Confidence 57899999999875543
No 335
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=26.97 E-value=95 Score=27.28 Aligned_cols=42 Identities=10% Similarity=0.051 Sum_probs=28.6
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCC
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLP 249 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 249 (269)
..+++.+|..|+--.- ......+..+.-..+.|+.|+-...+
T Consensus 434 tnVvf~NG~~DPWh~L-----G~~~st~~~~~~~li~gtsHCaDMyp 475 (514)
T KOG2182|consen 434 TNVVFPNGSLDPWHAL-----GLQNSTDSSVVSILINGTSHCADMYP 475 (514)
T ss_pred ceEEecCCCCCchhhh-----ccccCCCCCceEEEecCCccccccCC
Confidence 3799999999973211 22223345677888999999977653
No 336
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=26.83 E-value=1.9e+02 Score=19.04 Aligned_cols=54 Identities=13% Similarity=0.108 Sum_probs=34.9
Q ss_pred hHHHHHHHhhcCCCE-EEeeccCCCCCCCCCC--chhhHHHHHHHHHhcccccCCCCCccEEEeec
Q 024286 52 YDILCRRLVGTCKAV-VVSVNYRRAPENRYPC--AYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGD 114 (269)
Q Consensus 52 ~~~~~~~l~~~~g~~-v~~~d~r~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~ 114 (269)
.....+.++.. |.. .+..+||+-....+.. .-+|...+++-+.+... +.+++|.
T Consensus 16 vGkaiN~mad~-GiTGFfl~eYrGvsPd~wkgf~~~EDpE~aik~i~D~s~--------~AVlI~t 72 (110)
T COG4075 16 VGKAINIMADA-GITGFFLHEYRGVSPDKWKGFSKEEDPESAIKAIRDLSD--------KAVLIGT 72 (110)
T ss_pred HHHHHHHHHhc-CcceEEEEEecCcChhHhcCcccccCHHHHHHHHHHhhh--------ceEEEEE
Confidence 56677888887 765 7888999754332221 12677778877777643 5566654
No 337
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.69 E-value=43 Score=24.53 Aligned_cols=31 Identities=23% Similarity=0.213 Sum_probs=23.5
Q ss_pred cEEEeecCchHHHHHHHHHHhhhccccccceeeeCC
Q 024286 108 HIYLAGDSSGGNIVHHVALRAVESEVEILGNILLNP 143 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~i~~~p 143 (269)
.|.++.+|||-.+|-.+.. +.+++..+++++
T Consensus 58 hirlvAwSMGVwvAeR~lq-----g~~lksatAiNG 88 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQ-----GIRLKSATAING 88 (214)
T ss_pred hhhhhhhhHHHHHHHHHHh-----hccccceeeecC
Confidence 7899999999998887764 344666666664
No 338
>TIGR02739 TraF type-F conjugative transfer system pilin assembly protein TraF. This protein is part of a large group of proteins involved in conjugative transfer of plasmid DNA, specifically the F-type system. This protein has been predicted to contain a thioredoxin fold and has been shown to be localized to the periplasm. Unlike the related protein TrbB (TIGR02738), TraF does not contain a conserved pair of cysteines and has been shown not to function as a thiol disulfide isomerase by complementation of an Ecoli DsbA defect. The protein is believed to be involved in pilin assembly. Even more closely related than TrbB is a clade of genes (TIGR02740) which do contain the CXXC motif, but it is unclear whether these genes are involved in type-F conjugation systems per se.
Probab=26.25 E-value=2.6e+02 Score=22.37 Aligned_cols=36 Identities=8% Similarity=0.062 Sum_probs=28.0
Q ss_pred hhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhh
Q 024286 51 IYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDD 86 (269)
Q Consensus 51 ~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d 86 (269)
.+.+.++.|+.++|+.|+.++.-+.+...++....|
T Consensus 167 ~~apil~~fa~~ygi~v~~VS~DG~~~p~fp~~~~d 202 (256)
T TIGR02739 167 KMAPVIQAFAKEYGISVIPISVDGTLIPGLPNSRSD 202 (256)
T ss_pred HHHHHHHHHHHHhCCeEEEEecCCCCCCCCCCccCC
Confidence 378889999999999999998887765556665444
No 339
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=26.16 E-value=1e+02 Score=24.78 Aligned_cols=19 Identities=26% Similarity=0.048 Sum_probs=15.7
Q ss_pred cEEEeecCchHHHHHHHHH
Q 024286 108 HIYLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~ 126 (269)
+-.++|||+|-+.|+.++.
T Consensus 83 p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 83 PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred ccEEEecCHHHHHHHHHhC
Confidence 5699999999988877653
No 340
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=26.14 E-value=1e+02 Score=24.61 Aligned_cols=19 Identities=26% Similarity=0.097 Sum_probs=15.8
Q ss_pred cEEEeecCchHHHHHHHHH
Q 024286 108 HIYLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~ 126 (269)
+-.++|||+|=+.|+.++.
T Consensus 84 p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 84 PDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCEEeecCHHHHHHHHHhC
Confidence 5689999999988877764
No 341
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=25.93 E-value=99 Score=23.92 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=16.7
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEee
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSV 70 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~ 70 (269)
..||++|.+. .........++..|.++ ||.++.+
T Consensus 187 g~IiLlHd~~----~~t~~aL~~ii~~lk~~-Gy~fvtl 220 (224)
T TIGR02884 187 GAILLLHAVS----KDNAEALDKIIKDLKEQ-GYTFKSL 220 (224)
T ss_pred CcEEEEECCC----CCHHHHHHHHHHHHHHC-CCEEEEh
Confidence 3566666532 11122345555555555 6666654
No 342
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=25.86 E-value=2.2e+02 Score=23.91 Aligned_cols=61 Identities=18% Similarity=0.053 Sum_probs=39.6
Q ss_pred HHHHHHHhhcCCCEEEeeccCCCCC------------CCCCCchhhHHHHHHHHHhcccccCCCCCccEEEeecCchHHH
Q 024286 53 DILCRRLVGTCKAVVVSVNYRRAPE------------NRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNI 120 (269)
Q Consensus 53 ~~~~~~l~~~~g~~v~~~d~r~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~l 120 (269)
...++.|+++ |+.|..+-|....+ +.-|..-..+..++..+++... . ++=++|.++|--|
T Consensus 191 ~nIlr~L~~r-g~~vtVVP~~t~~eeIl~~~pDGiflSNGPGDP~~~~~~i~~ik~l~~------~-~iPifGICLGHQl 262 (368)
T COG0505 191 RNILRELVKR-GCRVTVVPADTSAEEILALNPDGIFLSNGPGDPAPLDYAIETIKELLG------T-KIPIFGICLGHQL 262 (368)
T ss_pred HHHHHHHHHC-CCeEEEEcCCCCHHHHHhhCCCEEEEeCCCCChhHHHHHHHHHHHHhc------c-CCCeEEEcHHHHH
Confidence 4668899988 99999988775421 1122233556666666666532 2 4578999999764
Q ss_pred H
Q 024286 121 V 121 (269)
Q Consensus 121 a 121 (269)
-
T Consensus 263 l 263 (368)
T COG0505 263 L 263 (368)
T ss_pred H
Confidence 3
No 343
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=25.67 E-value=2.3e+02 Score=24.09 Aligned_cols=55 Identities=9% Similarity=0.112 Sum_probs=33.6
Q ss_pred EEEcCCcccc-CC-CCchhhHHHHHHHhhcCCCEEEeeccCCCCCCCCCCchhhHHHHHHHHHhc
Q 024286 35 IFFHGGSFAH-SS-ANSAIYDILCRRLVGTCKAVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSR 97 (269)
Q Consensus 35 v~~HGgg~~~-~~-~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~ 97 (269)
+.+||||... .. ........+++.+.+. |...+.|- +.....+.+.++++-+.+.
T Consensus 57 ~hihG~gG~~~~D~~~~~~l~~i~~~~~~~-GtTsfLpT-------~iT~~~e~i~~al~~~~e~ 113 (380)
T COG1820 57 LHIHGGGGADFMDAGSVETLETMAEAHLRH-GTTSFLPT-------LITASLEKIKAALRAIREA 113 (380)
T ss_pred EeecCcCcccccCccCHHHHHHHHHHhhhc-Ceeeeeee-------cccCCHHHHHHHHHHHHHH
Confidence 7899955432 22 2333466777777777 98888775 3344455666666655554
No 344
>PRK00870 haloalkane dehalogenase; Provisional
Probab=25.51 E-value=2.7e+02 Score=22.30 Aligned_cols=62 Identities=11% Similarity=0.125 Sum_probs=32.9
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCC---CchHHHHHHHHHHHhhc
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPN---NGHFYTVMDEISNFVSC 267 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~---~~~~~~~~~~i~~fl~~ 267 (269)
+|++++||--...... ..+...|.+.+- +.+.++--||+....+. .-..++..+.+.++|++
T Consensus 47 ~~lvliHG~~~~~~~w-~~~~~~L~~~gy--~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~ 111 (302)
T PRK00870 47 PPVLLLHGEPSWSYLY-RKMIPILAAAGH--RVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQ 111 (302)
T ss_pred CEEEEECCCCCchhhH-HHHHHHHHhCCC--EEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence 5899999964332222 234455654443 44555555666432111 11245667777777753
No 345
>TIGR02578 cas_TM1811_Csm1 CRISPR-associated protein, Csm1 family. The family is designated Csm2, for CRISPR/Cas Subtype Mtube Protein 2. A typical example is TM1811 from Thermotoga maritima. CRISPR are Clustered Regularly Interspaced Short Palindromic Repeats. This protein family belongs to a conserved gene cluster regularly found near CRISPR repeats.
Probab=25.38 E-value=1.3e+02 Score=27.83 Aligned_cols=43 Identities=12% Similarity=0.171 Sum_probs=31.2
Q ss_pred HHHCCCCeEEEEeCCCceeeeeCCCCch--HHHHHHHHHHHhhcC
Q 024286 226 LKKAGQDVKLLYLEQATIGFYFLPNNGH--FYTVMDEISNFVSCN 268 (269)
Q Consensus 226 l~~~~~~~~~~~~~~~~H~~~~~~~~~~--~~~~~~~i~~fl~~~ 268 (269)
+.+.+.+..-++|.|+||.+.+.|+++. .+++.+++-+||-++
T Consensus 290 L~~l~L~~~nil~~gGG~F~lLlPnt~~~~l~~~~~~in~~l~~~ 334 (648)
T TIGR02578 290 LEELNLTRTNILFDGGGHFYLLLPNTEEARLEKLRERIEEELLKE 334 (648)
T ss_pred HHHcCCChhheEEecCCeEEEEecCChHHHHHHHHHHHHHHHHHh
Confidence 3455656666789999998888888766 566777777777654
No 346
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=25.03 E-value=76 Score=26.21 Aligned_cols=20 Identities=30% Similarity=0.398 Sum_probs=17.1
Q ss_pred EEEeecCchHHHHHHHHHHh
Q 024286 109 IYLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~~~ 128 (269)
-.+.|-|+|+.+|..++...
T Consensus 98 ~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 98 RVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred CEEEEECHHHHHHHHHHcCC
Confidence 36999999999999988754
No 347
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=24.96 E-value=1.2e+02 Score=24.55 Aligned_cols=19 Identities=32% Similarity=0.115 Sum_probs=16.0
Q ss_pred cEEEeecCchHHHHHHHHH
Q 024286 108 HIYLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~ 126 (269)
+-.++|||+|=..|+.++.
T Consensus 77 P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 77 PSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CcEEeecCHHHHHHHHHhC
Confidence 6799999999988887653
No 348
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=24.88 E-value=98 Score=24.70 Aligned_cols=42 Identities=17% Similarity=-0.009 Sum_probs=27.6
Q ss_pred CceeEEecCCCcChhHH--HHHHHHHHHCCCCeEEEEeCCCceee
Q 024286 203 PKSLVVVAGLDLIQDWQ--LAYMEGLKKAGQDVKLLYLEQATIGF 245 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~H~~ 245 (269)
.++.+..|.+|.=++.. +.+.++......++...+ ++..|+|
T Consensus 222 ~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~-~~i~HaF 265 (266)
T PF10230_consen 222 DKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDE-EGIPHAF 265 (266)
T ss_pred CEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEec-CCCCCCC
Confidence 48999999999888764 333333332224566665 7888876
No 349
>PRK03592 haloalkane dehalogenase; Provisional
Probab=24.82 E-value=3.3e+02 Score=21.64 Aligned_cols=60 Identities=12% Similarity=0.082 Sum_probs=35.1
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCC-chHHHHHHHHHHHhh
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNN-GHFYTVMDEISNFVS 266 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~~~i~~fl~ 266 (269)
+|+|++||.-...... ..+...|.+.+ +.+.++--||+..-.+.. ...++..+.+.++++
T Consensus 28 ~~vvllHG~~~~~~~w-~~~~~~L~~~~---~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~ 88 (295)
T PRK03592 28 DPIVFLHGNPTSSYLW-RNIIPHLAGLG---RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFD 88 (295)
T ss_pred CEEEEECCCCCCHHHH-HHHHHHHhhCC---EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 5999999975543333 23445565543 566666667775422211 235566677777765
No 350
>PRK12467 peptide synthase; Provisional
Probab=24.80 E-value=4.8e+02 Score=30.35 Aligned_cols=91 Identities=19% Similarity=0.133 Sum_probs=50.0
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCCCCCC-----CCCCchhhHHHHHHHHHhcccccCCCCC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRRAPEN-----RYPCAYDDGWTVLKWAKSRSWLQSKDSK 106 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 106 (269)
|.|+..|.+.- ... .+..+...+.. +..++.+..+..-.. ..+.......+.++|... ..
T Consensus 3693 ~~l~~~h~~~r---~~~--~~~~l~~~l~~--~~~~~~l~~~~~~~d~~~~~~~~~~~~~y~~~~~~~~~--------~~ 3757 (3956)
T PRK12467 3693 PALFCRHEGLG---TVF--DYEPLAVILEG--DRHVLGLTCRHLLDDGWQDTSLQAMAVQYADYILWQQA--------KG 3757 (3956)
T ss_pred cceeeechhhc---chh--hhHHHHHHhCC--CCcEEEEeccccccccCCccchHHHHHHHHHHHHHhcc--------CC
Confidence 67999998432 221 13444445543 556666665432211 111122223333333322 22
Q ss_pred ccEEEeecCchHHHHHHHHHHhhhccccccce
Q 024286 107 AHIYLAGDSSGGNIVHHVALRAVESEVEILGN 138 (269)
Q Consensus 107 ~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~ 138 (269)
+..+.|+|+||.+|..++.+....+..+..+
T Consensus 3758 -p~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~ 3788 (3956)
T PRK12467 3758 -PYGLLGWSLGGTLARLVAELLEREGESEAFL 3788 (3956)
T ss_pred -CeeeeeeecchHHHHHHHHHHHHcCCceeEE
Confidence 7899999999999999988765554444433
No 351
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=24.78 E-value=1.3e+02 Score=22.44 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=25.3
Q ss_pred hhHHHHHHHHHhcccccCCCCCccEEEeecCchHHHHHHH
Q 024286 85 DDGWTVLKWAKSRSWLQSKDSKAHIYLAGDSSGGNIVHHV 124 (269)
Q Consensus 85 ~d~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~la~~~ 124 (269)
.+...+++|.... .+-+ .|+++|||-=|++...+
T Consensus 65 ~~~~asleyAv~~-----L~v~-~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 65 LNCLSVLQYAVDV-----LKVK-HIIVCGHYGCGGVKAAL 98 (182)
T ss_pred cchhhhHHHHHHh-----cCCC-EEEEecCCCchHHHHHH
Confidence 3577888888776 5667 99999999777655443
No 352
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=24.62 E-value=61 Score=25.50 Aligned_cols=19 Identities=26% Similarity=0.309 Sum_probs=17.0
Q ss_pred EEeecCchHHHHHHHHHHh
Q 024286 110 YLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~~ 128 (269)
.+.|-|+|+.+|..++...
T Consensus 34 ~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred EEEEEcHHHHHHHHHHhCC
Confidence 8999999999999988754
No 353
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=24.45 E-value=1.6e+02 Score=25.25 Aligned_cols=29 Identities=17% Similarity=0.114 Sum_probs=20.7
Q ss_pred CCCchhhHHHHHHHhhcCCCEEEeeccCCC
Q 024286 46 SANSAIYDILCRRLVGTCKAVVVSVNYRRA 75 (269)
Q Consensus 46 ~~~~~~~~~~~~~l~~~~g~~v~~~d~r~~ 75 (269)
...+..-..++..|+.. |+.|+++|.-..
T Consensus 133 vGKTTta~nLA~~LA~~-G~rVLlIDlDpQ 161 (405)
T PRK13869 133 SGKTTTSAHLAQYLALQ-GYRVLAVDLDPQ 161 (405)
T ss_pred CCHHHHHHHHHHHHHhc-CCceEEEcCCCC
Confidence 44444456677788887 999999997543
No 354
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=23.58 E-value=2.3e+02 Score=22.60 Aligned_cols=61 Identities=20% Similarity=0.208 Sum_probs=35.1
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCC--------CchHHHHHHHHHHHhhc
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPN--------NGHFYTVMDEISNFVSC 267 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~--------~~~~~~~~~~i~~fl~~ 267 (269)
+|++++||.-...-.. ......+... .+.+.++--||+..-.+. .-..++..+.+.++|++
T Consensus 30 ~~vlllHG~~~~~~~w-~~~~~~L~~~---~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~ 98 (294)
T PLN02824 30 PALVLVHGFGGNADHW-RKNTPVLAKS---HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSD 98 (294)
T ss_pred CeEEEECCCCCChhHH-HHHHHHHHhC---CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHH
Confidence 5899999987654333 2333455443 355556556676432111 12346777788888764
No 355
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=23.06 E-value=2.9e+02 Score=21.94 Aligned_cols=41 Identities=22% Similarity=0.195 Sum_probs=24.1
Q ss_pred CceeEEecCCCcChh---HHHHHHHHHHHCCCCeEEEEeCCCceee
Q 024286 203 PKSLVVVAGLDLIQD---WQLAYMEGLKKAGQDVKLLYLEQATIGF 245 (269)
Q Consensus 203 ~P~li~~G~~D~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 245 (269)
++++++||..+.... ....+++.+.+.+..+- .++--||+-
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~--~~Dl~G~G~ 70 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVL--RFDYRGMGD 70 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEE--EeCCCCCCC
Confidence 378888887764431 12455677777775544 444445653
No 356
>PRK15000 peroxidase; Provisional
Probab=22.98 E-value=1.7e+02 Score=22.12 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=26.5
Q ss_pred cEEEEEcCCccccCCCC-chhhHHHHHHHhhcCCCEEEeec
Q 024286 32 PVIIFFHGGSFAHSSAN-SAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~-~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
++||+++.+.|...... ...+....+.+... |+.|+++.
T Consensus 36 ~vvL~F~p~~~t~vC~~El~~l~~~~~~f~~~-g~~vigvS 75 (200)
T PRK15000 36 TTVLFFWPMDFTFVCPSELIAFDKRYEEFQKR-GVEVVGVS 75 (200)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEE
Confidence 89999999877654433 22234455666666 99998886
No 357
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=22.98 E-value=3.7e+02 Score=20.94 Aligned_cols=53 Identities=13% Similarity=0.104 Sum_probs=29.9
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCC-EEEeeccCCCCCCCCCCchhhHHHHHHHHHhcc
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKA-VVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRS 98 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~-~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~ 98 (269)
-+|++.||... .+......+..+..+.|| .|+....-+ ..++..+++++.+..
T Consensus 139 ~~vlmgHGt~h-----~s~~~YacLd~~~~~~~f~~v~v~~ve~---------yP~~d~vi~~l~~~~ 192 (265)
T COG4822 139 ILVLMGHGTDH-----HSNAAYACLDHVLDEYGFDNVFVAAVEG---------YPLVDTVIEYLRKNG 192 (265)
T ss_pred EEEEEecCCCc-----cHHHHHHHHHHHHHhcCCCceEEEEecC---------CCcHHHHHHHHHHcC
Confidence 58999999431 111133445555555587 455443221 235677888887763
No 358
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=22.96 E-value=1.4e+02 Score=23.45 Aligned_cols=38 Identities=21% Similarity=0.176 Sum_probs=25.0
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeec
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
=+||++|.|....... ......+++.+... |..++.=.
T Consensus 186 ~vIv~~HwG~e~~~~p-~~~q~~~a~~lida-GaDiIiG~ 223 (250)
T PF09587_consen 186 VVIVSLHWGIEYENYP-TPEQRELARALIDA-GADIIIGH 223 (250)
T ss_pred EEEEEeccCCCCCCCC-CHHHHHHHHHHHHc-CCCEEEeC
Confidence 5888899875444333 33357777788777 87777544
No 359
>PRK10907 intramembrane serine protease GlpG; Provisional
Probab=22.92 E-value=3.1e+02 Score=22.16 Aligned_cols=47 Identities=11% Similarity=0.258 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHCCCCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHhhc
Q 024286 218 WQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSC 267 (269)
Q Consensus 218 ~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl~~ 267 (269)
..+.|.+.++..+.+++.. ++......+ .+.++.+++.+++.+|+++
T Consensus 12 ~a~~f~dyl~~~~i~~~~~--~~~~~~lwl-~d~~~~~~~~~~~~~f~~~ 58 (276)
T PRK10907 12 LAQAFVDYMATQGVILTIQ--QHNQSDIWL-ADESQAERVRAELARFLEN 58 (276)
T ss_pred HHHHHHHHHHHCCCcEEEe--cCCceEEEe-cCHHHHHHHHHHHHHHHhC
Confidence 3578999999998877666 443333333 3566778888888888875
No 360
>PLN02606 palmitoyl-protein thioesterase
Probab=22.55 E-value=2.5e+02 Score=23.07 Aligned_cols=35 Identities=6% Similarity=-0.167 Sum_probs=22.7
Q ss_pred ceeEEecCCCcChhHH-HHHHHHHHHC-CCCeEEEEe
Q 024286 204 KSLVVVAGLDLIQDWQ-LAYMEGLKKA-GQDVKLLYL 238 (269)
Q Consensus 204 P~li~~G~~D~~~~~~-~~~~~~l~~~-~~~~~~~~~ 238 (269)
|++|+||--|.-...+ ..+.+.+.+. +.++..+.+
T Consensus 28 PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i 64 (306)
T PLN02606 28 PFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI 64 (306)
T ss_pred CEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE
Confidence 9999999999765433 5666666533 555444443
No 361
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.36 E-value=70 Score=25.21 Aligned_cols=17 Identities=24% Similarity=0.313 Sum_probs=15.5
Q ss_pred EEeecCchHHHHHHHHH
Q 024286 110 YLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~ 126 (269)
.+.|-|+|+.+|..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 79999999999998874
No 362
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=22.35 E-value=2.8e+02 Score=22.24 Aligned_cols=56 Identities=14% Similarity=0.087 Sum_probs=37.5
Q ss_pred CceeEEecCCCcChhHHHHHHHHHHHCC--CCeEEEEeCCCceeeeeCCCCchHHHHHHHHHHHh
Q 024286 203 PKSLVVVAGLDLIQDWQLAYMEGLKKAG--QDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFV 265 (269)
Q Consensus 203 ~P~li~~G~~D~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~i~~fl 265 (269)
.-+.+.+|+.|.-+|. .+.+.++..- .++++-+ ++..|.|... +.+..++.+.+.+
T Consensus 243 d~l~Fyygt~DgW~p~--~~~d~~kdd~~eed~~Lde-dki~HAFV~~----~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 243 DSLWFYYGTNDGWVPS--HYYDYYKDDVPEEDLKLDE-DKIPHAFVVK----HAQYMANAVFDMI 300 (301)
T ss_pred cEEEEEccCCCCCcch--HHHHHHhhhcchhceeecc-ccCCcceeec----ccHHHHHHHHHhh
Confidence 3688999999988884 3344444432 3566666 7889999765 3566666666654
No 363
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=22.30 E-value=1.7e+02 Score=20.06 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=17.7
Q ss_pred CcccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeec
Q 024286 29 VVVPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 29 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
+..++||+...+|. ++ ...+ .+++..||.|..++
T Consensus 85 ~~~~vvvyC~~~G~-----rs---~~a~-~~L~~~G~~v~~L~ 118 (128)
T cd01520 85 RDPKLLIYCARGGM-----RS---QSLA-WLLESLGIDVPLLE 118 (128)
T ss_pred CCCeEEEEeCCCCc-----cH---HHHH-HHHHHcCCceeEeC
Confidence 33489999953232 11 1222 33344499866554
No 364
>KOG0635 consensus Adenosine 5'-phosphosulfate kinase [Inorganic ion transport and metabolism]
Probab=22.21 E-value=2.4e+02 Score=20.63 Aligned_cols=36 Identities=17% Similarity=0.273 Sum_probs=27.7
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeec
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
..+||+.| ..|+..+...-.+-+.|.++ |-....+|
T Consensus 31 GcviWiTG---LSgSGKStlACaL~q~L~qr-gkl~Y~LD 66 (207)
T KOG0635|consen 31 GCVIWITG---LSGSGKSTLACALSQALLQR-GKLTYILD 66 (207)
T ss_pred CcEEEEec---cCCCCchhHHHHHHHHHHhc-CceEEEec
Confidence 78999999 66677666566777788877 87777777
No 365
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=22.04 E-value=62 Score=30.15 Aligned_cols=18 Identities=28% Similarity=0.252 Sum_probs=16.1
Q ss_pred EEEeecCchHHHHHHHHH
Q 024286 109 IYLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~ 126 (269)
=.|.|.|+||.++..+|.
T Consensus 68 d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 68 DVISGTSAGGINGVLLAY 85 (739)
T ss_pred ceEEeeCHHHHHHHHHHc
Confidence 388999999999998886
No 366
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=21.99 E-value=75 Score=22.87 Aligned_cols=18 Identities=33% Similarity=0.482 Sum_probs=15.7
Q ss_pred cEEEeecCchHHHHHHHH
Q 024286 108 HIYLAGDSSGGNIVHHVA 125 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a 125 (269)
--.+.|.|+|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 458899999999998887
No 367
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=21.60 E-value=72 Score=23.79 Aligned_cols=17 Identities=12% Similarity=0.204 Sum_probs=8.4
Q ss_pred HHHHHHHhhcCCCEEEee
Q 024286 53 DILCRRLVGTCKAVVVSV 70 (269)
Q Consensus 53 ~~~~~~l~~~~g~~v~~~ 70 (269)
..++..|.++ ||.++.+
T Consensus 171 ~~~i~~l~~~-Gy~~vtl 187 (191)
T TIGR02764 171 PTIIKKLKEK-GYEFVTI 187 (191)
T ss_pred HHHHHHHHHC-CCEEEEH
Confidence 4444444444 6555544
No 368
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=21.41 E-value=1.3e+02 Score=24.70 Aligned_cols=19 Identities=16% Similarity=0.356 Sum_probs=16.8
Q ss_pred EEeecCchHHHHHHHHHHh
Q 024286 110 YLAGDSSGGNIVHHVALRA 128 (269)
Q Consensus 110 ~l~G~S~Gg~la~~~a~~~ 128 (269)
.+.|.|+|+.+|..++...
T Consensus 100 ~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 100 VISGSSAGAIVAALLGTHT 118 (298)
T ss_pred EEEEEcHHHHHHHHHHcCC
Confidence 6999999999999998754
No 369
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=21.16 E-value=1.2e+02 Score=24.72 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=25.3
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccC
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR 73 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r 73 (269)
.-+++|-|||--. -..++.++|++ |..++.-|--
T Consensus 38 g~~vLITGgg~Gl-------Gr~ialefa~r-g~~~vl~Din 71 (300)
T KOG1201|consen 38 GEIVLITGGGSGL-------GRLIALEFAKR-GAKLVLWDIN 71 (300)
T ss_pred CCEEEEeCCCchH-------HHHHHHHHHHh-CCeEEEEecc
Confidence 5688888877311 26788999998 9988888744
No 370
>KOG4150 consensus Predicted ATP-dependent RNA helicase [RNA processing and modification]
Probab=21.13 E-value=1.7e+02 Score=26.49 Aligned_cols=43 Identities=9% Similarity=0.223 Sum_probs=33.7
Q ss_pred CceeEEecCCCcChh---HHHHHHHHHHHCCCCeEEEEeCCCceee
Q 024286 203 PKSLVVVAGLDLIQD---WQLAYMEGLKKAGQDVKLLYLEQATIGF 245 (269)
Q Consensus 203 ~P~li~~G~~D~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 245 (269)
.|++|..|-+|.-.. +...|+++-.+...+.+++.|+.+|-..
T Consensus 899 ~P~FI~~~~~dI~TECKApEKEfaErqt~R~RPaRLIFYD~~G~~~ 944 (1034)
T KOG4150|consen 899 VPTFITCNYSDIATECKAPEKEFAERQTQRYRPARLIFYDPGGTGI 944 (1034)
T ss_pred cceEEecCchhhcccCCCchHHHHHhhhhccCcceEEEEcCCCCcc
Confidence 499999999885432 3478888888888899999998877654
No 371
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=21.03 E-value=75 Score=22.80 Aligned_cols=13 Identities=31% Similarity=0.355 Sum_probs=10.7
Q ss_pred cEEEeecCchHHH
Q 024286 108 HIYLAGDSSGGNI 120 (269)
Q Consensus 108 ~i~l~G~S~Gg~l 120 (269)
-..++|.|+|+++
T Consensus 69 G~vi~G~SAGA~i 81 (154)
T PF03575_consen 69 GGVIIGTSAGAMI 81 (154)
T ss_dssp TSEEEEETHHHHC
T ss_pred CCEEEEEChHHhh
Confidence 4788999999964
No 372
>PRK08118 topology modulation protein; Reviewed
Probab=20.82 E-value=3.4e+02 Score=19.74 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=22.8
Q ss_pred EEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccCC
Q 024286 35 IFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYRR 74 (269)
Q Consensus 35 v~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r~ 74 (269)
|++.| ..|+.. ..+++.|++..|+.++.+|.-.
T Consensus 4 I~I~G---~~GsGK----STlak~L~~~l~~~~~~lD~l~ 36 (167)
T PRK08118 4 IILIG---SGGSGK----STLARQLGEKLNIPVHHLDALF 36 (167)
T ss_pred EEEEC---CCCCCH----HHHHHHHHHHhCCCceecchhh
Confidence 56667 223433 5678899988899999888543
No 373
>PRK10382 alkyl hydroperoxide reductase subunit C; Provisional
Probab=20.81 E-value=2.1e+02 Score=21.52 Aligned_cols=39 Identities=18% Similarity=0.083 Sum_probs=25.0
Q ss_pred cEEEEEcCCccccCCCC-chhhHHHHHHHhhcCCCEEEeec
Q 024286 32 PVIIFFHGGSFAHSSAN-SAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~-~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
++||+++.+.|..+... ...+....+.+... |+.|+++.
T Consensus 33 ~vvL~F~P~~~~p~C~~el~~l~~~~~~f~~~-g~~vigIS 72 (187)
T PRK10382 33 WSVFFFYPADFTFVCPTELGDVADHYEELQKL-GVDVYSVS 72 (187)
T ss_pred eEEEEEECCCCCCcCHHHHHHHHHHHHHHHhC-CCEEEEEe
Confidence 89999997777654433 11234445555555 89999885
No 374
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=20.78 E-value=1.3e+02 Score=24.71 Aligned_cols=22 Identities=27% Similarity=0.182 Sum_probs=17.9
Q ss_pred CCCccEEEeecCchHHHHHHHHH
Q 024286 104 DSKAHIYLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 104 ~~~~~i~l~G~S~Gg~la~~~a~ 126 (269)
+.+ +.++.|||+|=+-|+..+.
T Consensus 83 ~~~-p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVK-PDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCC-CceeecccHhHHHHHHHcc
Confidence 445 7799999999998887764
No 375
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=20.55 E-value=1.5e+02 Score=24.56 Aligned_cols=18 Identities=28% Similarity=-0.056 Sum_probs=14.8
Q ss_pred EEEeecCchHHHHHHHHH
Q 024286 109 IYLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 109 i~l~G~S~Gg~la~~~a~ 126 (269)
-+++|||+|=+.|+..+.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 368999999988887764
No 376
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=20.47 E-value=1.4e+02 Score=23.33 Aligned_cols=39 Identities=21% Similarity=0.285 Sum_probs=25.5
Q ss_pred ccEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeeccC
Q 024286 31 VPVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVNYR 73 (269)
Q Consensus 31 ~p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d~r 73 (269)
.|+||++.| +-++........+...+--+ |+.|.++.-+
T Consensus 30 ~~vlIv~eG---~DaAGKg~~I~~l~~~lDPR-g~~v~~~~~p 68 (230)
T TIGR03707 30 ARVVIVFEG---RDAAGKGGTIKRITEHLNPR-GARVVALPKP 68 (230)
T ss_pred CCEEEEEeC---CCCCCchHHHHHHHHhcCCC-eeEEEeCCCC
Confidence 399999999 33344433355555555556 9999987643
No 377
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=20.43 E-value=96 Score=27.80 Aligned_cols=19 Identities=16% Similarity=0.020 Sum_probs=15.6
Q ss_pred cEEEeecCchHHHHHHHHH
Q 024286 108 HIYLAGDSSGGNIVHHVAL 126 (269)
Q Consensus 108 ~i~l~G~S~Gg~la~~~a~ 126 (269)
+-+++|||+|=+.|+..|-
T Consensus 266 Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 266 PDFALGYSKGEASMWASLG 284 (538)
T ss_pred CCEEeecCHHHHHHHHHhC
Confidence 4499999999888877764
No 378
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.30 E-value=5.7e+02 Score=22.14 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=25.6
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCCCEEEeec
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCKAVVVSVN 71 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g~~v~~~d 71 (269)
|.||++=| ..|+........++.++-.+ ||.+..+.
T Consensus 101 psVimfVG---LqG~GKTTtc~KlA~y~kkk-G~K~~Lvc 136 (483)
T KOG0780|consen 101 PSVIMFVG---LQGSGKTTTCTKLAYYYKKK-GYKVALVC 136 (483)
T ss_pred CcEEEEEe---ccCCCcceeHHHHHHHHHhc-CCceeEEe
Confidence 88888888 55555555577788888777 98866554
No 379
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=20.14 E-value=4.3e+02 Score=21.93 Aligned_cols=83 Identities=18% Similarity=0.157 Sum_probs=49.5
Q ss_pred cEEEEEcCCccccCCCCchhhHHHHHHHhhcCC-CEEEeeccCCCCCCCCCCchhhHHHHHHHHHhcccccCCCCCccEE
Q 024286 32 PVIIFFHGGSFAHSSANSAIYDILCRRLVGTCK-AVVVSVNYRRAPENRYPCAYDDGWTVLKWAKSRSWLQSKDSKAHIY 110 (269)
Q Consensus 32 p~vv~~HGgg~~~~~~~~~~~~~~~~~l~~~~g-~~v~~~d~r~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~i~ 110 (269)
|-++++-||.-..-..-...|......++.. | +.-...+|.+ +....-..+++....++...|++..+ +|.
T Consensus 30 ~g~imLggGNPa~iPem~~~f~~~~aemla~-~~~~e~~cnY~~------pQG~~~li~ala~~l~~~ygwnit~~-NIa 101 (417)
T COG3977 30 PGAIMLGGGNPARIPEMDDYFQDLLAEMLAS-GKATEALCNYDG------PQGKAVLIDALAKMLRREYGWNITAQ-NIA 101 (417)
T ss_pred CCceeeCCCCcccChhHHHHHHHHHHHHHhc-chHHHHHhcCCC------CcchhHHHHHHHHHHHHHhCCCCccc-eee
Confidence 6677777765433222233444445555554 4 4444455553 33334455566556666667888888 999
Q ss_pred EeecCchHHHHH
Q 024286 111 LAGDSSGGNIVH 122 (269)
Q Consensus 111 l~G~S~Gg~la~ 122 (269)
|.-.|.-++.=+
T Consensus 102 lTnGSQs~fFYl 113 (417)
T COG3977 102 LTNGSQSAFFYL 113 (417)
T ss_pred ecCCccchHHHH
Confidence 999999887543
Done!