AmiGO: BLAST Results


BLAST match view associations BLAST with AT5G19210 AT5G19210 AT5G19210	protein from Arabidopsis thaliana	5.8e-98
BLAST match view associations BLAST with KH1 KH1 KH1	protein from Drosophila melanogaster	1.2e-17
BLAST match view associations BLAST with VC_0660 VC_0660 VC_0660 ATP-dependent RNA helicase SrmB	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.7e-16
BLAST match view associations BLAST with VC_0660 VC_0660 VC_0660 ATP-dependent RNA helicase SrmB	protein from Vibrio cholerae O1 biovar El Tor	1.7e-16
BLAST match view associations BLAST with GSU_0914 GSU_0914 GSU_0914 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	1.5e-15
BLAST match view associations BLAST with srmB srmB srmB SrmB, DEAD-box RNA helicase	protein from Escherichia coli K-12	1.8e-14
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Gallus gallus	3.6e-14
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Gallus gallus	3.9e-14
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus licheniformis DSM 13 = ATCC 14580	7.9e-14
BLAST match view associations BLAST with VC_A0204 VC_A0204 VC_A0204 ATP-dependent RNA helicase RhlE	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.1e-13
BLAST match view associations BLAST with VC_A0204 VC_A0204 VC_A0204 ATP-dependent RNA helicase RhlE	protein from Vibrio cholerae O1 biovar El Tor	1.1e-13
BLAST match view associations BLAST with DDX43 DDX43 DDX43 Probable ATP-dependent RNA helicase DDX43	protein from Homo sapiens	1.7e-13
BLAST match view associations BLAST with CPS_4097 CPS_4097 CPS_4097 ATP-dependent RNA helicase SrmB	protein from Colwellia psychrerythraea 34H	2.2e-13
BLAST match view associations BLAST with GSU_0491 GSU_0491 GSU_0491 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	3.2e-13
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus subtilis subsp. subtilis str. 168	3.4e-13
BLAST match view associations BLAST with CPS_0174 CPS_0174 CPS_0174 ATP-dependent RNA helicase RhlB	protein from Colwellia psychrerythraea 34H	1.1e-12
BLAST match view associations BLAST with LOC100300937 LOC100300937 LOC100300937 Uncharacterized protein	protein from Bos taurus	3.2e-12
BLAST match view associations BLAST with olvas olvas olvas VASA	protein from Oryzias latipes	3.3e-12
BLAST match view associations BLAST with FAL1 FAL1 FAL1	gene_product from Candida albicans	4.8e-12
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Geobacillus kaustophilus HTA426	6.8e-12
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Canis lupus familiaris	7.2e-12
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Coxiella burnetii RSA 493	7.6e-12
BLAST match view associations BLAST with CBU_0670 CBU_0670 CBU_0670 ATP-dependent RNA helicase RhlE, putative	protein from Coxiella burnetii RSA 493	7.6e-12
BLAST match view associations BLAST with glh-1 glh-1 glh-1	gene from Caenorhabditis elegans	7.7e-12
BLAST match view associations BLAST with glh-1 glh-1 glh-1 ATP-dependent RNA helicase glh-1	protein from Caenorhabditis elegans	7.7e-12
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	8.8e-12
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	8.8e-12
BLAST match view associations BLAST with ddx47 ddx47 ddx47 DEAD/DEAH box helicase	gene from Dictyostelium discoideum	1.1e-11
BLAST match view associations BLAST with rhlB rhlB rhlB ATP-dependent RNA helicase RhlB	protein from Shewanella oneidensis MR-1	1.2e-11
BLAST match view associations BLAST with SO_0407 SO_0407 SO_0407 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	1.2e-11
BLAST match view associations BLAST with ddx4 ddx4 ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Xenopus laevis	1.4e-11
BLAST match view associations BLAST with rhlB rhlB rhlB ATP-dependent RNA helicase RhlB	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.6e-11
BLAST match view associations BLAST with VC_0305 VC_0305 VC_0305 ATP-dependent RNA helicase RhlB	protein from Vibrio cholerae O1 biovar El Tor	1.6e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 10987	1.8e-11
BLAST match view associations BLAST with BA_2109 BA_2109 BA_2109 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	1.9e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis str. Al Hakam	1.9e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus E33L	1.9e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis serovar konkukian str. 97-27	1.9e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus anthracis	1.9e-11
BLAST match view associations BLAST with BA_0247 BA_0247 BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	1.9e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 14579	1.9e-11
BLAST match view associations BLAST with SPO_1443 SPO_1443 SPO_1443 ATP-dependent RNA helicase RhlE	protein from Ruegeria pomeroyi DSS-3	1.9e-11
BLAST match view associations BLAST with F53H1.1 F53H1.1 F53H1.1	gene from Caenorhabditis elegans	2.2e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Sus scrofa	2.2e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Bos taurus	3.2e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Bos taurus	3.2e-11
BLAST match view associations BLAST with srmB srmB srmB ATP-dependent RNA helicase SrmB	protein from Shewanella oneidensis MR-1	3.2e-11
BLAST match view associations BLAST with SO_0947 SO_0947 SO_0947 ATP-dependent RNA helicase SrmB	protein from Shewanella oneidensis MR-1	3.2e-11
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	protein from Mus musculus	4.1e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Homo sapiens	4.1e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Homo sapiens	4.3e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Macaca fascicularis	4.3e-11
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Escherichia coli K-12	5.2e-11
BLAST match view associations BLAST with BAS5307 BAS5307 BAS5307 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	5.5e-11
BLAST match view associations BLAST with BA_5703 BA_5703 BA_5703 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	5.5e-11
BLAST match view associations BLAST with LOC100523329 LOC100523329 LOC100523329 Uncharacterized protein	protein from Sus scrofa	6.1e-11
BLAST match view associations BLAST with CPS_3401 CPS_3401 CPS_3401 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	7.2e-11
BLAST match view associations BLAST with SO_3783 SO_3783 SO_3783 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	7.3e-11
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor str. N16961	7.5e-11
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor	7.5e-11
BLAST match view associations BLAST with vasa vasa vasa vasa homolog	gene_product from Danio rerio	8.4e-11
BLAST match view associations BLAST with cgh-1 cgh-1 cgh-1	gene from Caenorhabditis elegans	8.8e-11
BLAST match view associations BLAST with cgh-1 cgh-1 cgh-1 ATP-dependent RNA helicase cgh-1	protein from Caenorhabditis elegans	8.8e-11
BLAST match view associations BLAST with TIF TIF TIF	gene_product from Candida albicans	9.9e-11
BLAST match view associations BLAST with TIF1 TIF1 TIF1 ATP-dependent RNA helicase eIF4A	protein from Candida albicans SC5314	9.9e-11
BLAST match view associations BLAST with glh-3 glh-3 glh-3	gene from Caenorhabditis elegans	1.1e-10
BLAST match view associations BLAST with glh-3 glh-3 glh-3 ATP-dependent RNA helicase glh-3	protein from Caenorhabditis elegans	1.1e-10
BLAST match view associations BLAST with DBP8 DBP8 DBP8	gene_product from Candida albicans	1.3e-10
BLAST match view associations BLAST with glh-2 glh-2 glh-2	gene from Caenorhabditis elegans	1.3e-10
BLAST match view associations BLAST with glh-2 glh-2 glh-2 ATP-dependent RNA helicase glh-2	protein from Caenorhabditis elegans	1.3e-10
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Sus scrofa	1.3e-10
BLAST match view associations BLAST with LOC100512980 LOC100512980 LOC100512980 Uncharacterized protein	protein from Sus scrofa	1.4e-10
BLAST match view associations BLAST with EIF4A-III EIF4A-III EIF4A-III eukaryotic initiation factor 4A-III	protein from Arabidopsis thaliana	1.5e-10
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	gene from Rattus norvegicus	1.6e-10
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Rattus norvegicus	1.6e-10
BLAST match view associations BLAST with ddx43 ddx43 ddx43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43	gene_product from Danio rerio	1.6e-10
BLAST match view associations BLAST with HNE_0695 HNE_0695 HNE_0695 Putative ATP-dependent RNA helicase RhlE	protein from Hyphomonas neptunium ATCC 15444	1.8e-10
BLAST match view associations BLAST with DDX43 DDX43 DDX43 Uncharacterized protein	protein from Sus scrofa	2.5e-10
BLAST match view associations BLAST with vbh-1 vbh-1 vbh-1	gene from Caenorhabditis elegans	2.6e-10
BLAST match view associations BLAST with DBP8 DBP8 DBP8 ATPase, putative RNA helicase	gene from Saccharomyces cerevisiae	3.0e-10
BLAST match view associations BLAST with AT1G72730 AT1G72730 AT1G72730	protein from Arabidopsis thaliana	3.3e-10
BLAST match view associations BLAST with pl10 pl10 pl10	gene_product from Danio rerio	3.8e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Bos taurus	4.0e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Uncharacterized protein	protein from Canis lupus familiaris	4.0e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Homo sapiens	4.0e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Sus scrofa	4.0e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Sus scrofa	4.0e-10
BLAST match view associations BLAST with Eif4a3 Eif4a3 Eif4a3 eukaryotic translation initiation factor 4A, isoform 3	gene from Rattus norvegicus	4.0e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Gallus gallus	4.1e-10
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	4.2e-10
BLAST match view associations BLAST with rhlB rhlB rhlB RhlB	protein from Escherichia coli K-12	4.2e-10
BLAST match view associations BLAST with DDX25 DDX25 DDX25 ATP-dependent RNA helicase DDX25	protein from Bos taurus	4.6e-10
BLAST match view associations BLAST with DDX43 DDX43 DDX43 Uncharacterized protein	protein from Gallus gallus	4.6e-10
BLAST match view associations BLAST with ddx3 ddx3 ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3	gene_product from Danio rerio	5.4e-10
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  024287
        (269 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2182202 - symbol:AT5G19210 species:3702 "Arabi...   973  5.8e-98   1
FB|FBgn0086130 - symbol:KH1 "KH1" species:7227 "Drosophil...   223  1.2e-17   1
UNIPROTKB|Q9KU63 - symbol:VC_0660 "ATP-dependent RNA heli...   187  1.7e-16   2
TIGR_CMR|VC_0660 - symbol:VC_0660 "ATP-dependent RNA heli...   187  1.7e-16   2
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he...   202  1.5e-15   1
POMBASE|SPBC543.06c - symbol:dbp8 "ATP-dependent RNA heli...   193  1.5e-14   1
UNIPROTKB|P21507 - symbol:srmB "SrmB, DEAD-box RNA helica...   179  1.8e-14   2
UNIPROTKB|F1NL04 - symbol:DDX4 "Uncharacterized protein" ...   191  3.6e-14   1
UNIPROTKB|F1N991 - symbol:DDX4 "Uncharacterized protein" ...   191  3.9e-14   1
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation...   189  7.9e-14   1
UNIPROTKB|Q65N62 - symbol:cshA "DEAD-box ATP-dependent RN...   187  7.9e-14   1
UNIPROTKB|Q9KMW4 - symbol:VC_A0204 "ATP-dependent RNA hel...   176  1.1e-13   2
TIGR_CMR|VC_A0204 - symbol:VC_A0204 "ATP-dependent RNA he...   176  1.1e-13   2
UNIPROTKB|Q9NXZ2 - symbol:DDX43 "Probable ATP-dependent R...   186  1.7e-13   1
TIGR_CMR|CPS_4097 - symbol:CPS_4097 "ATP-dependent RNA he...   172  2.2e-13   2
TIGR_CMR|GSU_0491 - symbol:GSU_0491 "ATP-dependent RNA he...   169  3.2e-13   2
UNIPROTKB|P96614 - symbol:cshA "DEAD-box ATP-dependent RN...   184  3.4e-13   1
TIGR_CMR|CPS_0174 - symbol:CPS_0174 "ATP-dependent RNA he...   163  1.1e-12   2
UNIPROTKB|G3MYF0 - symbol:LOC100300937 "Uncharacterized p...   181  3.2e-12   1
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz...   181  3.3e-12   1
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica...   178  4.8e-12   1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN...   178  6.8e-12   1
POMBASE|SPAC1F5.10 - symbol:SPAC1F5.10 "ATP-dependent RNA...   160  7.1e-12   2
UNIPROTKB|E2RMU5 - symbol:DDX4 "Uncharacterized protein" ...   180  7.2e-12   1
UNIPROTKB|Q83DM8 - symbol:rhlE "ATP-dependent RNA helicas...   166  7.6e-12   2
TIGR_CMR|CBU_0670 - symbol:CBU_0670 "ATP-dependent RNA he...   166  7.6e-12   2
WB|WBGene00001598 - symbol:glh-1 species:6239 "Caenorhabd...   180  7.7e-12   1
UNIPROTKB|P34689 - symbol:glh-1 "ATP-dependent RNA helica...   180  7.7e-12   1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel...   177  8.8e-12   1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he...   177  8.8e-12   1
DICTYBASE|DDB_G0280147 - symbol:ddx47 "DEAD/DEAH box heli...   169  1.1e-11   2
UNIPROTKB|Q8EJQ5 - symbol:rhlB "ATP-dependent RNA helicas...   161  1.2e-11   2
TIGR_CMR|SO_0407 - symbol:SO_0407 "ATP-dependent RNA heli...   161  1.2e-11   2
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme...   178  1.3e-11   1
UNIPROTKB|D4ADV9 - symbol:Ddx4 "Probable ATP-dependent RN...   178  1.3e-11   1
UNIPROTKB|Q91372 - symbol:ddx4 "Probable ATP-dependent RN...   178  1.4e-11   1
UNIPROTKB|Q9KV52 - symbol:rhlB "ATP-dependent RNA helicas...   158  1.6e-11   2
TIGR_CMR|VC_0305 - symbol:VC_0305 "ATP-dependent RNA heli...   158  1.6e-11   2
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric...   162  1.6e-11   2
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN...   176  1.8e-11   1
TIGR_CMR|BA_2109 - symbol:BA_2109 "ATP-dependent RNA heli...   159  1.9e-11   2
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN...   176  1.9e-11   1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN...   176  1.9e-11   1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN...   176  1.9e-11   1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN...   176  1.9e-11   1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli...   176  1.9e-11   1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN...   176  1.9e-11   1
TIGR_CMR|SPO_1443 - symbol:SPO_1443 "ATP-dependent RNA he...   164  1.9e-11   2
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha...   178  2.2e-11   1
UNIPROTKB|Q6GWX0 - symbol:DDX4 "Probable ATP-dependent RN...   177  2.2e-11   1
UNIPROTKB|F1MYC6 - symbol:DDX4 "Probable ATP-dependent RN...   176  3.2e-11   1
UNIPROTKB|Q5W5U4 - symbol:DDX4 "Probable ATP-dependent RN...   176  3.2e-11   1
UNIPROTKB|Q8EI96 - symbol:srmB "ATP-dependent RNA helicas...   173  3.2e-11   1
TIGR_CMR|SO_0947 - symbol:SO_0947 "ATP-dependent RNA heli...   173  3.2e-11   1
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ...   175  4.1e-11   1
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN...   175  4.1e-11   1
UNIPROTKB|Q9NQI0 - symbol:DDX4 "Probable ATP-dependent RN...   175  4.3e-11   1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN...   175  4.3e-11   1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas...   154  5.2e-11   2
UNIPROTKB|Q81JK1 - symbol:BAS5307 "ATP-dependent RNA heli...   145  5.5e-11   2
TIGR_CMR|BA_5703 - symbol:BA_5703 "ATP-dependent RNA heli...   145  5.5e-11   2
UNIPROTKB|F1S758 - symbol:LOC100523329 "Uncharacterized p...   165  6.1e-11   2
TIGR_CMR|CPS_3401 - symbol:CPS_3401 "ATP-dependent RNA he...   142  7.2e-11   2
TIGR_CMR|SO_3783 - symbol:SO_3783 "ATP-dependent RNA heli...   157  7.3e-11   2
UNIPROTKB|Q9KLE2 - symbol:VC_A0804 "ATP-dependent RNA hel...   173  7.5e-11   1
TIGR_CMR|VC_A0804 - symbol:VC_A0804 "ATP-dependent RNA he...   173  7.5e-11   1
ZFIN|ZDB-GENE-990415-272 - symbol:vasa "vasa homolog" spe...   173  8.4e-11   1
WB|WBGene00000479 - symbol:cgh-1 species:6239 "Caenorhabd...   150  8.8e-11   2
UNIPROTKB|Q95YF3 - symbol:cgh-1 "ATP-dependent RNA helica...   150  8.8e-11   2
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican...   151  9.9e-11   2
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas...   151  9.9e-11   2
WB|WBGene00001600 - symbol:glh-3 species:6239 "Caenorhabd...   172  1.1e-10   1
UNIPROTKB|O01836 - symbol:glh-3 "ATP-dependent RNA helica...   172  1.1e-10   1
CGD|CAL0004058 - symbol:DBP8 species:5476 "Candida albica...   169  1.3e-10   1
WB|WBGene00001599 - symbol:glh-2 species:6239 "Caenorhabd...   173  1.3e-10   1
UNIPROTKB|Q966L9 - symbol:glh-2 "ATP-dependent RNA helica...   173  1.3e-10   1
UNIPROTKB|I3LRT7 - symbol:DDX4 "Probable ATP-dependent RN...   165  1.3e-10   1
UNIPROTKB|F1RVF0 - symbol:LOC100512980 "Uncharacterized p...   165  1.4e-10   2
TAIR|locus:2091191 - symbol:EIF4A-III "eukaryotic initiat...   153  1.5e-10   2
RGD|1308793 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box pol...   171  1.6e-10   1
UNIPROTKB|Q64060 - symbol:Ddx4 "Probable ATP-dependent RN...   171  1.6e-10   1
ZFIN|ZDB-GENE-080204-77 - symbol:ddx43 "DEAD (Asp-Glu-Ala...   171  1.6e-10   1
UNIPROTKB|Q0C4B9 - symbol:HNE_0695 "Putative ATP-dependen...   169  1.8e-10   1
UNIPROTKB|F1S0I6 - symbol:DDX43 "Uncharacterized protein"...   169  2.5e-10   1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd...   169  2.6e-10   1
SGD|S000001212 - symbol:DBP8 "ATPase, putative RNA helica...   166  3.0e-10   1
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi...   159  3.3e-10   2
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795...   168  3.8e-10   1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f...   153  4.0e-10   2
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein...   153  4.0e-10   2
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f...   153  4.0e-10   2
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f...   153  4.0e-10   2
UNIPROTKB|F1RZ83 - symbol:EIF4A3 "Eukaryotic initiation f...   153  4.0e-10   2
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi...   153  4.0e-10   2
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f...   153  4.1e-10   2
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu...   167  4.2e-10   1
UNIPROTKB|P0A8J8 - symbol:rhlB "RhlB" species:83333 "Esch...   154  4.2e-10   2
UNIPROTKB|Q2TBP1 - symbol:DDX25 "ATP-dependent RNA helica...   162  4.6e-10   2
UNIPROTKB|F1NVJ6 - symbol:DDX43 "Uncharacterized protein"...   167  4.6e-10   1
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al...   167  5.4e-10   1

WARNING:  Descriptions of 571 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2182202 [details] [associations]
            symbol:AT5G19210 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009507 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AC069326 UniGene:At.31320 UniGene:At.429
            EMBL:BT004328 IPI:IPI00526020 IPI:IPI00537594 RefSeq:NP_197422.2
            RefSeq:NP_974812.1 ProteinModelPortal:Q3E9C3 SMR:Q3E9C3
            EnsemblPlants:AT5G19210.2 GeneID:832041 KEGG:ath:AT5G19210
            GeneFarm:1569 TAIR:At5g19210 HOGENOM:HOG000005705 InParanoid:Q3E9C3
            OMA:SASIPQH PhylomeDB:Q3E9C3 ProtClustDB:CLSN2918195
            Genevestigator:Q3E9C3 GermOnline:AT5G19210 Uniprot:Q3E9C3
        Length = 472

 Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
 Identities = 184/265 (69%), Positives = 216/265 (81%)

Query:     1 MGSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASAS 60
             + SLC ++EKHIF+++SV+VLV+DEVDFLF                  C+ RQTVFASAS
Sbjct:   208 VASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASAS 267

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
             IPQH+ F+H+CIQQKWTK DVVHVHV+AI P+P CL HRFV+C K  K+Q LL+L++SDA
Sbjct:   268 IPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDA 327

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
             PES IIFVGEQSEKSKKAGN PSTTLL++FL  SYKGS ++LLLE +MNFNSRAASL E+
Sbjct:   328 PESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEI 387

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSI 240
             RQGGG+LLVSTDIAARGIDLPETTHI+NFDLP++  DYLHRAGR GRKPFSD K  V ++
Sbjct:   388 RQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANL 447

Query:   241 ITSEELFVLQRYENELKFKSEELTL 265
             ITSEE FVLQRYENEL F  EE+ L
Sbjct:   448 ITSEERFVLQRYENELMFSCEEMML 472


>FB|FBgn0086130 [details] [associations]
            symbol:KH1 "KH1" species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0005575
            "cellular_component" evidence=ND] [GO:0016063 "rhodopsin
            biosynthetic process" evidence=IMP] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
            GO:GO:0006200 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
            EMBL:AY058512 RefSeq:NP_608544.1 UniGene:Dm.4179 SMR:Q9VPT3
            EnsemblMetazoa:FBtr0078009 GeneID:33254 KEGG:dme:Dmel_CG3561
            UCSC:CG3561-RA CTD:33254 FlyBase:FBgn0086130 InParanoid:Q9VPT3
            OMA:ILCSAET OrthoDB:EOG4X69R7 GenomeRNAi:33254 NextBio:782677
            Uniprot:Q9VPT3
        Length = 536

 Score = 223 (83.6 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 77/261 (29%), Positives = 125/261 (47%)

Query:     1 MGSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNR-----QTV 55
             +G+L +L+   I+++E V+ LV+DE D L +                    +     Q +
Sbjct:   242 LGALSKLVTTGIYRMEQVRHLVLDEADTLLDDTFTDKLSYFLRRFPFHLVQKEDAGTQMI 301

Query:    56 FASASIPQH-RRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLS 114
              ASA++P + R  LH  I    T  +VV  H++    L S +  +F+   K  +  TLLS
Sbjct:   302 LASATMPTNTREILHKVIDVD-TIREVVSPHLHR---LMSHVTQKFLRLSKADRPATLLS 357

Query:   115 LIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRA 174
             L++ D  +   + V      S K+  +   ++   FL+NS     + L L  +M    R 
Sbjct:   358 LVKHDLAKRRPLIVF-----SNKSTTSDFVSI---FLNNS---GVNCLNLNGDMLMKIRL 406

Query:   175 ASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEK 234
                 + + G   +L +TD+ +RG+D     H+ NFD P    DY+HR GR GR    D K
Sbjct:   407 GRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFPLHVSDYIHRCGRIGRVGNMD-K 465

Query:   235 WTVTSIITSE-ELFVLQRYEN 254
               VT++I+S  E+ V+QR E+
Sbjct:   466 ALVTNLISSRREIDVVQRIEH 486


>UNIPROTKB|Q9KU63 [details] [associations]
            symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0016070 "RNA metabolic process" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
            RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
            GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
        Length = 423

 Score = 187 (70.9 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
 Identities = 42/116 (36%), Positives = 68/116 (58%)

Query:   147 LVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHI 206
             L D  +   K       ++ EM  + R  ++   R+G   +L++TD+AARGID+P+ +H+
Sbjct:   259 LADLRAELEKAQIPCAWIQGEMPQDRRNNAISRFREGDVNILLATDVAARGIDVPDISHV 318

Query:   207 YNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
              NFDLPRSA  YLHR GRTGR   + +K    S++ + +  ++ R E  +K + +E
Sbjct:   319 INFDLPRSADVYLHRIGRTGR---AGKKGIAISLVEAHDQPMMARVERYIKEEVKE 371

 Score = 44 (20.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L + I+   F   +++ L++DE D
Sbjct:   134 GRLLEYIDAERFDCRAIEWLILDEAD 159


>TIGR_CMR|VC_0660 [details] [associations]
            symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
            KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
            ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
            KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
        Length = 423

 Score = 187 (70.9 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
 Identities = 42/116 (36%), Positives = 68/116 (58%)

Query:   147 LVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHI 206
             L D  +   K       ++ EM  + R  ++   R+G   +L++TD+AARGID+P+ +H+
Sbjct:   259 LADLRAELEKAQIPCAWIQGEMPQDRRNNAISRFREGDVNILLATDVAARGIDVPDISHV 318

Query:   207 YNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
              NFDLPRSA  YLHR GRTGR   + +K    S++ + +  ++ R E  +K + +E
Sbjct:   319 INFDLPRSADVYLHRIGRTGR---AGKKGIAISLVEAHDQPMMARVERYIKEEVKE 371

 Score = 44 (20.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L + I+   F   +++ L++DE D
Sbjct:   134 GRLLEYIDAERFDCRAIEWLILDEAD 159


>TIGR_CMR|GSU_0914 [details] [associations]
            symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
            GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
            ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
            PATRIC:22024603 ProtClustDB:CLSK924451
            BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
        Length = 447

 Score = 202 (76.2 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 58/187 (31%), Positives = 96/187 (51%)

Query:    80 DVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAG 139
             D V V V  + P  +  H  + +  + +K   LL L++    ES +IF      ++K+ G
Sbjct:   199 DPVTVQVGTVAPAVTVAHALYPV-EQHLKTPLLLELLRHTDTESVLIFT-RTKHRAKRLG 256

Query:   140 NAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGID 199
                            Y+ +S    L+  ++ N R A+L   R G   +LV+TDIAARGID
Sbjct:   257 EQLEKA--------GYRAAS----LQGNLSQNRRQAALDGFRDGTFQILVATDIAARGID 304

Query:   200 LPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFK 259
             + + +H+ N+D+P +A  Y+HR GRTGR   S + +T   ++TS++  +++  E  L   
Sbjct:   305 VSQVSHVINYDIPDTAEAYIHRIGRTGRAARSGDAFT---LVTSDDGAMVRAIERSLGAP 361

Query:   260 SEELTLQ 266
              E  T+Q
Sbjct:   362 IERRTVQ 368


>POMBASE|SPBC543.06c [details] [associations]
            symbol:dbp8 "ATP-dependent RNA helicase Dbp8
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPBC543.06c GO:GO:0005524 GO:GO:0005730
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW
            RefSeq:NP_596794.1 ProteinModelPortal:Q9HGM5 STRING:Q9HGM5
            EnsemblFungi:SPBC543.06c.1 GeneID:2541069 KEGG:spo:SPBC543.06c
            NextBio:20802183 Uniprot:Q9HGM5
        Length = 453

 Score = 193 (73.0 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 78/269 (28%), Positives = 119/269 (44%)

Query:     2 GSLCQLI----EKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFA 57
             G L  LI    E+ I  L  ++ LV+DE D L +                   +RQT+  
Sbjct:   134 GRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPAS-EDRQTLLF 192

Query:    58 SASIPQHRRFLHNCIQQKWTKSDV--VHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSL 115
             +A++    R L     QK  K  +    V  + I  +PS L   ++    +++   L+ L
Sbjct:   193 TATVTDAIRQL-KYQPQKNNKPPLWLYEVETDNIS-VPSTLQQSYIFVSSQVREAYLVHL 250

Query:   116 --IQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSR 173
               I  +A +S IIFV     +++ A    S   L++           V  L  EM    R
Sbjct:   251 LTIPENAKKSAIIFVN----RTRTAELIYSILRLLELR---------VTELHSEMVQRER 297

Query:   174 AASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDE 233
               SL   R     +LV+TD+A+RG+D+P    + NFDLPR   DY+HR GRT R   S E
Sbjct:   298 INSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGE 357

Query:   234 KWTVTSIITSEELFVLQRYENELKFKSEE 262
                  SI+T  ++ ++   E+ +  K  E
Sbjct:   358 S---ISIVTERDVDLVHAIEDRVGTKLSE 383


>UNIPROTKB|P21507 [details] [associations]
            symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
            evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
            evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
            evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
            EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
            EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
            OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
            PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
            ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
            MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
            EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
            KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
            EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
            BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
            Genevestigator:P21507 Uniprot:P21507
        Length = 444

 Score = 179 (68.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 43/110 (39%), Positives = 67/110 (60%)

Query:   164 LEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAG 223
             LE EM    R  ++  + +G   +LV+TD+AARGID+P+ +H++NFD+PRS   YLHR G
Sbjct:   278 LEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIG 337

Query:   224 RTGRKPFSDEKWTVTSIITSEELFVLQ---RY-ENELKFKS-EELTLQTQ 268
             RT R   +  K T  S++ + +  +L    RY E  +K +  +EL  +T+
Sbjct:   338 RTAR---AGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIDELRPKTR 384

 Score = 52 (23.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L Q I++  F   +V+ L++DE D
Sbjct:   135 GRLLQYIKEENFDCRAVETLILDEAD 160


>UNIPROTKB|F1NL04 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
            of protein localization" evidence=IEA] [GO:0033391 "chromatoid
            body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
            EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
            Ensembl:ENSGALT00000038830 Uniprot:F1NL04
        Length = 542

 Score = 191 (72.3 bits), Expect = 3.6e-14, P = 3.6e-14
 Identities = 63/227 (27%), Positives = 102/227 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNR-QTVFASAS 60
             G L  +IEK    L  V+ LV+DE D + +                   +R QT+  SA+
Sbjct:   303 GRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSAT 362

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ K+D + + +       S +    +   +  K   L+ ++QS  
Sbjct:   363 FPEEVQRLAG----EFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIEILQSTG 418

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    +  KKA        L  FL      S+ +    E+     R  +L + 
Sbjct:   419 GERTMVFV----DTKKKAD------YLAAFLCQENLPSTSIHGDREQ---REREIALRDF 465

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +A+RG+D+    H+ NFDLP +  DY+HR GRTGR
Sbjct:   466 RSGKCQILVATSVASRGLDIENVQHVINFDLPNTIEDYVHRIGRTGR 512


>UNIPROTKB|F1N991 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
            OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
            IPI:IPI00819436 ProteinModelPortal:F1N991
            Ensembl:ENSGALT00000023724 Uniprot:F1N991
        Length = 568

 Score = 191 (72.3 bits), Expect = 3.9e-14, P = 3.9e-14
 Identities = 63/227 (27%), Positives = 102/227 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNR-QTVFASAS 60
             G L  +IEK    L  V+ LV+DE D + +                   +R QT+  SA+
Sbjct:   303 GRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSAT 362

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ K+D + + +       S +    +   +  K   L+ ++QS  
Sbjct:   363 FPEEVQRLAG----EFLKTDYIFLVIGNTCGACSDVQQNILQVPRLSKRDKLIEILQSTG 418

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    +  KKA        L  FL      S+ +    E+     R  +L + 
Sbjct:   419 GERTMVFV----DTKKKAD------YLAAFLCQENLPSTSIHGDREQ---REREIALRDF 465

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +A+RG+D+    H+ NFDLP +  DY+HR GRTGR
Sbjct:   466 RSGKCQILVATSVASRGLDIENVQHVINFDLPNTIEDYVHRIGRTGR 512


>POMBASE|SPCC1795.11 [details] [associations]
            symbol:sum3 "translation initiation RNA helicase Sum3"
            species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
            translational initiation" evidence=IMP] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
            "regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
            "positive regulation of gene expression" evidence=IMP] [GO:0031047
            "gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
            conjugation with cellular fusion" evidence=IGI] [GO:0071470
            "cellular response to osmotic stress" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
            GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
            GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
            OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
            EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
            ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
            MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
            EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
            NextBio:20799875 Uniprot:O13370
        Length = 636

 Score = 189 (71.6 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 62/228 (27%), Positives = 104/228 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXX-XXXXXXXXXXXXXCNNRQTVFASAS 60
             G L  LI++    L +++ LV+DE D + +                     RQT+  SA+
Sbjct:   314 GRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSAT 373

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L     + + K D V + V  +      +  + V      K   LL ++ +  
Sbjct:   374 FPRDIQLL----ARDFLK-DYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILHTLP 428

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLE 179
             PE   +IFV     ++K+  +      L D+L NS   ++ +     +     R  +L  
Sbjct:   429 PEGLTLIFV-----ETKRMADT-----LTDYLLNSNFPATSI---HGDRTQRERERALEL 475

Query:   180 VRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              R G   ++V+T +A+RG+D+P  TH+ N+DLP    DY+HR GRTGR
Sbjct:   476 FRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGR 523


>UNIPROTKB|Q65N62 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
            EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
            ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
            EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
            GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
            GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
            PATRIC:18946609 ProtClustDB:CLSK886742
            BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
        Length = 487

 Score = 187 (70.9 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 53/185 (28%), Positives = 92/185 (49%)

Query:    83 HVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAP 142
             HV V A +   S +   ++   ++ K+ TL  L+   +PE  I+F G    ++K+     
Sbjct:   203 HVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQSPELAIVF-G----RTKR--RVD 255

Query:   143 STTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPE 202
               T  ++    + +G      +  ++    R  +L + +QG   +LV+TD+AARG+D+  
Sbjct:   256 ELTEALNLRGYTAEG------IHGDLTQAKRMVALRKFKQGAIEVLVATDVAARGLDISG 309

Query:   203 TTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
              TH+YNFD+P+    Y+HR GRTGR   + +     + IT  E  +L+  E   K K + 
Sbjct:   310 VTHVYNFDVPQDPESYVHRIGRTGR---AGKTGMAMTFITPREKDMLRAIEQTTKRKMDR 366

Query:   263 LTLQT 267
             +   T
Sbjct:   367 MKAPT 371


>UNIPROTKB|Q9KMW4 [details] [associations]
            symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
            RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
            GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
            ProtClustDB:CLSK869561 Uniprot:Q9KMW4
        Length = 451

 Score = 176 (67.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
 Identities = 36/85 (42%), Positives = 54/85 (63%)

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
             +R  +L + + G   +LV+TDIAARGID+P+   + NF+LP+ A DY+HR GRTGR    
Sbjct:   281 ARTRALADFKAGEVRILVATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEV 340

Query:   232 DEKWTVTSIITSEELFVLQRYENEL 256
              +  ++ S I + ELF ++R    L
Sbjct:   341 GKAISLVSAIEAPELFAIERLTQAL 365

 Score = 51 (23.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  L  ++  K + +++LV+DE D
Sbjct:   132 GRLMDLYNQNAVKFDQLEILVLDEAD 157


>TIGR_CMR|VC_A0204 [details] [associations]
            symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
            RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
            GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
            ProtClustDB:CLSK869561 Uniprot:Q9KMW4
        Length = 451

 Score = 176 (67.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
 Identities = 36/85 (42%), Positives = 54/85 (63%)

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
             +R  +L + + G   +LV+TDIAARGID+P+   + NF+LP+ A DY+HR GRTGR    
Sbjct:   281 ARTRALADFKAGEVRILVATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEV 340

Query:   232 DEKWTVTSIITSEELFVLQRYENEL 256
              +  ++ S I + ELF ++R    L
Sbjct:   341 GKAISLVSAIEAPELFAIERLTQAL 365

 Score = 51 (23.0 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  L  ++  K + +++LV+DE D
Sbjct:   132 GRLMDLYNQNAVKFDQLEILVLDEAD 157


>UNIPROTKB|Q9NXZ2 [details] [associations]
            symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
            species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
            IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
            ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
            PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
            Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
            CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
            HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
            InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
            ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
            Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
            GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
        Length = 648

 Score = 186 (70.5 bits), Expect = 1.7e-13, P = 1.7e-13
 Identities = 55/180 (30%), Positives = 96/180 (53%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLP-SCLHHRFVICGKKMKY 109
             +RQTV  SA+ P H   +H  + Q + K  ++ V+V  +  +  S +    ++  ++ K+
Sbjct:   420 DRQTVMTSATWP-HS--VHR-LAQSYLKEPMI-VYVGTLDLVAVSSVKQNIIVTTEEEKW 474

Query:   110 QTLLSLIQS-DAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSY-KGSSDVLLLEEE 167
               + + +QS  + +  I+FV      S+KA        + D LS+    G+  V  L  +
Sbjct:   475 SHMQTFLQSMSSTDKVIVFV------SRKA--------VADHLSSDLILGNISVESLHGD 520

Query:   168 MNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
                  R  +L   + G   +L++TD+A+RG+D+ + TH+YNFD PR+  +Y+HR GRTGR
Sbjct:   521 REQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGR 580


>TIGR_CMR|CPS_4097 [details] [associations]
            symbol:CPS_4097 "ATP-dependent RNA helicase SrmB"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
            "RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
            biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K05590
            ProtClustDB:PRK11192 RefSeq:YP_270752.2 ProteinModelPortal:Q47WS0
            STRING:Q47WS0 PRIDE:Q47WS0 GeneID:3520098 KEGG:cps:CPS_4097
            PATRIC:21471063 OMA:YLDKGHF BioCyc:CPSY167879:GI48-4110-MONOMER
            Uniprot:Q47WS0
        Length = 430

 Score = 172 (65.6 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
 Identities = 38/111 (34%), Positives = 65/111 (58%)

Query:   148 VDFLSNS-YKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHI 206
             V +LS   Y      + LE +M  + R  ++   ++G   +LV+TD+AARG+D+ + +H+
Sbjct:   270 VQYLSGKLYAEELPCVWLEGKMPQDKRNKAIERFKKGEVKVLVATDVAARGLDIDDISHV 329

Query:   207 YNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELK 257
              NFD+PR    Y+HR GRTGR   + +K T  S++ + ++ V+ + E   K
Sbjct:   330 INFDMPRKVDIYIHRIGRTGR---AGKKGTAISLVEAHDMGVIGKIERYTK 377

 Score = 54 (24.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L + IE   F    +++LV+DE D
Sbjct:   144 GRLLEYIENEQFDAREIEILVLDEAD 169


>TIGR_CMR|GSU_0491 [details] [associations]
            symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
            KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
            BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
        Length = 450

 Score = 169 (64.5 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
 Identities = 37/89 (41%), Positives = 55/89 (61%)

Query:   164 LEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAG 223
             L  +M  N+R  ++  ++QG   LLV+TD+AARG+D+   +H+ NFDLP+ A DY+HR G
Sbjct:   274 LHGDMPQNARNRTIAAMKQGRIRLLVATDVAARGLDVTGISHVINFDLPKFAEDYVHRIG 333

Query:   224 RTGRKPFSDEKWTVTSIITSEELFVLQRY 252
             RTGR   S    +  S+     L  ++RY
Sbjct:   334 RTGRAGASGIAISFASLNEVNYLARIERY 362

 Score = 58 (25.5 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
 Identities = 27/151 (17%), Positives = 57/151 (37%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L+++    L  +++LV+DE D + +                    RQT+  +A++
Sbjct:   132 GRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAASPAT---RQTLLFTATM 188

Query:    62 PQHRRFLHNCIQQKWTKSDVV-----HVHVNAIKPLPSCLHH-----RFVICGKKMKYQT 111
                   L   + ++  + D+      H H+     +   LHH     R +I  + ++   
Sbjct:   189 DSAMARLAGRLLREPERIDIAGTKTTHEHIEQRLHVADDLHHKNRLLRHLITDESLRRAI 248

Query:   112 LLSLIQSDAPESGIIFVGEQSEKSKKAGNAP 142
             + S  + DA    +    +    +   G+ P
Sbjct:   249 IFSATKRDAENLALELKAQGHSAAALHGDMP 279


>UNIPROTKB|P96614 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:224308 "Bacillus subtilis subsp. subtilis str. 168"
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
            "response to cold" evidence=IGI] [GO:0010501 "RNA secondary
            structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
            evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
            GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
            EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
            ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
            EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
            PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
            GO:GO:0010501 Uniprot:P96614
        Length = 494

 Score = 184 (69.8 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 51/181 (28%), Positives = 88/181 (48%)

Query:    83 HVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAP 142
             HV V A +   S +   ++   ++ K+ TL  L+   +PE  I+F G    +  +   A 
Sbjct:   203 HVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQSPELAIVF-GRTKRRVDELAEAL 261

Query:   143 STTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPE 202
             +   L  + +    G         ++    R  +L + ++G   +LV+TD+AARG+D+  
Sbjct:   262 N---LRGYAAEGIHG---------DLTQAKRMVALRKFKEGAIEVLVATDVAARGLDISG 309

Query:   203 TTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
              TH+YNFD+P+    Y+HR GRTGR   + +     + IT  E  +L+  E   K K + 
Sbjct:   310 VTHVYNFDVPQDPESYVHRIGRTGR---AGKTGMAMTFITPREKSMLRAIEQTTKRKMDR 366

Query:   263 L 263
             +
Sbjct:   367 M 367


>TIGR_CMR|CPS_0174 [details] [associations]
            symbol:CPS_0174 "ATP-dependent RNA helicase RhlB"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006402
            "mRNA catabolic process" evidence=ISS] HAMAP:MF_00661
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0006401 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY ProtClustDB:PRK04837
            RefSeq:YP_266942.1 ProteinModelPortal:Q48AH1 STRING:Q48AH1
            GeneID:3521970 KEGG:cps:CPS_0174 PATRIC:21463765
            BioCyc:CPSY167879:GI48-277-MONOMER Uniprot:Q48AH1
        Length = 428

 Score = 163 (62.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 46/144 (31%), Positives = 69/144 (47%)

Query:   111 TLL-SLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMN 169
             TLL +LI+ D PE  I+F   +    K   +  +  + V  L+        + +LEE   
Sbjct:   242 TLLQTLIEEDWPEKAIVFANTKHVCEKVFDHLNADKIRVGLLTGDVPQKKRLKILEE--- 298

Query:   170 FNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKP 229
             F      +L          V+TD+AARG+ +P  TH++N+DLP    DY+HR GRTGR  
Sbjct:   299 FTDGTVDIL----------VATDVAARGLHIPSVTHVFNYDLPDDCQDYVHRIGRTGR-- 346

Query:   230 FSDEKWTVTSIITSEELFVLQRYE 253
              + E     S+   + +F L   E
Sbjct:   347 -AGETGHAISLACEQYVFNLPEIE 369

 Score = 61 (26.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 10/30 (33%), Positives = 22/30 (73%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G L   +++ I+ L++++V+V+DE D +F+
Sbjct:   140 GRLIDYMKQGIYNLKNIEVIVLDEADRMFD 169


>UNIPROTKB|G3MYF0 [details] [associations]
            symbol:LOC100300937 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
            Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
        Length = 608

 Score = 181 (68.8 bits), Expect = 3.2e-12, P = 3.2e-12
 Identities = 63/209 (30%), Positives = 107/209 (51%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLP-SCLHHRFVICGKKMKY 109
             +RQTV  +AS P   R L     Q + K  ++ V+V  +  +  + +    ++  ++ K 
Sbjct:   379 DRQTVMTTASWPDSTRRL----AQSYLKQPMI-VYVGTLDLVTVNTVKQNIIVTTEEEKR 433

Query:   110 QTLLSLIQSDAPESGII-FVGEQSEKSKKAGNAPSTTLLVDFLSN--SYKGSSDVLLLEE 166
               +   +QS +P+  +I FV      S+K        L+ D LS+  S +G   V  L  
Sbjct:   434 SLVKEFLQSLSPKDKVIVFV------SRK--------LVADDLSSDLSIQGIP-VQSLHG 478

Query:   167 EMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTG 226
             +   + R  +L + R G   +L++TD+AARG+D+ + TH+YN++ PR+  +Y+HR GRTG
Sbjct:   479 DREQSDRDQALEDFRTGRVKILIATDLAARGLDVSDVTHVYNYNFPRNIEEYVHRVGRTG 538

Query:   227 RKPFSDEKWTVTSI----ITSEELFVLQR 251
             R     E  T+ +     I  E + +LQR
Sbjct:   539 RAGKIGESITLVTQDDWKIADELIKILQR 567


>UNIPROTKB|Q90ZF6 [details] [associations]
            symbol:olvas "VASA" species:8090 "Oryzias latipes"
            [GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
            RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
            SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
        Length = 617

 Score = 181 (68.8 bits), Expect = 3.3e-12, P = 3.3e-12
 Identities = 62/227 (27%), Positives = 103/227 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I +    L  V+ LV+DE D + +                     RQT+  SA+
Sbjct:   317 GRLLDMIGRGKVGLSKVRHLVLDEADRMLDMGFEPDMRRLVGSPGMPSKEERQTLMFSAT 376

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L       + K D + V V  +    + +   F+   K  K + LL L+++  
Sbjct:   377 FPEDIQRL----AADFLKVDYLFVAVGVVGGACTDVEQTFLQVTKFNKREQLLDLLRTIG 432

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  ++A        +  FL      ++ +    E+     R  +L + 
Sbjct:   433 SERTMVFV----ETKRQAD------FIAAFLCQEKVPTTSIHGDREQ---REREKALADF 479

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +A+RG+D+P+  H+ NFDLP +  DY+HR GRTGR
Sbjct:   480 RSGKCPVLVATSVASRGLDIPDVQHVVNFDLPNTIDDYVHRIGRTGR 526


>CGD|CAL0001638 [details] [associations]
            symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
            evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
            RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
            SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
            KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
        Length = 399

 Score = 178 (67.7 bits), Expect = 4.8e-12, P = 4.8e-12
 Identities = 39/124 (31%), Positives = 74/124 (59%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T L V++L++  K  +  V+ +  +M  + R + + + R+G   +L+STD+ ARGID+ 
Sbjct:   273 NTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDVWARGIDVQ 332

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP    +Y+HR GR+GR  F   K T  ++IT +++  L+ +E     K +
Sbjct:   333 QVSLVINYDLPTDKENYIHRIGRSGR--FG-RKGTAINLITKDDVVTLKEFEKYYSTKIK 389

Query:   262 ELTL 265
             E+ +
Sbjct:   390 EMPM 393


>UNIPROTKB|Q5L3G9 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
            OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
            ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
            KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
            BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
        Length = 467

 Score = 178 (67.7 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 47/159 (29%), Positives = 78/159 (49%)

Query:   105 KKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLL 164
             +K K+  L  L+   APE  I+F G    +  +   A +   L  + +    G       
Sbjct:   224 EKKKFDILTRLLDIQAPELAIVF-GRTKRRVDELAEALN---LRGYAAEGIHG------- 272

Query:   165 EEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGR 224
               +++   R + L + ++G   +LV+TD+AARG+D+   TH+YNFD+P+    Y+HR GR
Sbjct:   273 --DLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGR 330

Query:   225 TGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
             TGR   + +     + +T  E+  L   E   K K E +
Sbjct:   331 TGR---AGKTGVAMTFVTPREIGQLHHIERTTKRKMERM 366


>POMBASE|SPAC1F5.10 [details] [associations]
            symbol:SPAC1F5.10 "ATP-dependent RNA helicase
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
            GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
            OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
            ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
            EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
            NextBio:20802696 Uniprot:Q10055
        Length = 394

 Score = 160 (61.4 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
 Identities = 38/119 (31%), Positives = 67/119 (56%)

Query:   148 VDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHI 206
             VD+L+   + ++  V  +  EM    R A + + RQG   +L+ TDI ARGID+ + + +
Sbjct:   273 VDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLV 332

Query:   207 YNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTL 265
              N+DLP +  +Y+HR GR+GR  F   K    + +T+E++ +L+  E       +E+ +
Sbjct:   333 INYDLPANRENYIHRIGRSGR--FG-RKGVAINFVTNEDVRILRDIEQYYSTVIDEMPM 388

 Score = 56 (24.8 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
 Identities = 29/127 (22%), Positives = 51/127 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  +I +   +  +V++L++DE D L N                     Q V  SA++
Sbjct:   148 GRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPP---GTQVVVVSATL 204

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKK-MKYQTLLSLIQSDA 120
             PQ    + N    K+T ++ V + V   +     L   F+   K+  K+ TL  L  +  
Sbjct:   205 PQDVLEMTN----KFT-TNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLT 259

Query:   121 PESGIIF 127
                 +IF
Sbjct:   260 ITQAVIF 266


>UNIPROTKB|E2RMU5 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
            "leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
            GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
            Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
        Length = 728

 Score = 180 (68.4 bits), Expect = 7.2e-12, P = 7.2e-12
 Identities = 64/227 (28%), Positives = 103/227 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L  V+ LV+DE D + +                     RQT+  SA+
Sbjct:   425 GRLMDIIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 484

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ KS+ + V V  +      +    +  G+  K + L+ +++S  
Sbjct:   485 FPEEIQRLAG----EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRSIG 540

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   541 DERTMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 587

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NFDLP +  +Y+HR GRTGR
Sbjct:   588 RCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGR 634


>UNIPROTKB|Q83DM8 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:227377
            "Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
            KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
            BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
        Length = 420

 Score = 166 (63.5 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
 Identities = 35/88 (39%), Positives = 60/88 (68%)

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
             +R  +L + +QG   +LV+TD+AARG+D+ +  H+ NF+LP +A DY+HR GRTGR   S
Sbjct:   294 ARMRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRA--S 351

Query:   232 DEKWTVTSIITSEELFVLQRYENELKFK 259
             ++   + S+++ +E+ +L+  E  L+ K
Sbjct:   352 NDGVAI-SLVSGDEVRLLRDIEKLLQSK 378

 Score = 48 (22.0 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  L+ + +  L  V+  V+DE D
Sbjct:   145 GRLLDLVNQGVLNLSRVEFFVLDEAD 170


>TIGR_CMR|CBU_0670 [details] [associations]
            symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
            putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
            GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
            ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
            Uniprot:Q83DM8
        Length = 420

 Score = 166 (63.5 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
 Identities = 35/88 (39%), Positives = 60/88 (68%)

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
             +R  +L + +QG   +LV+TD+AARG+D+ +  H+ NF+LP +A DY+HR GRTGR   S
Sbjct:   294 ARMRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRA--S 351

Query:   232 DEKWTVTSIITSEELFVLQRYENELKFK 259
             ++   + S+++ +E+ +L+  E  L+ K
Sbjct:   352 NDGVAI-SLVSGDEVRLLRDIEKLLQSK 378

 Score = 48 (22.0 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  L+ + +  L  V+  V+DE D
Sbjct:   145 GRLLDLVNQGVLNLSRVEFFVLDEAD 170


>WB|WBGene00001598 [details] [associations]
            symbol:glh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
            development" evidence=IMP] [GO:0016070 "RNA metabolic process"
            evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
            "RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
            [GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
            "DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
            PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
            ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
            PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
            KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
            InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
        Length = 763

 Score = 180 (68.4 bits), Expect = 7.7e-12, P = 7.7e-12
 Identities = 58/233 (24%), Positives = 102/233 (43%)

Query:     1 MGSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCN--NRQTVFAS 58
             +G +    E+   KL+  +  V+DE D + +                     NRQT+  S
Sbjct:   476 VGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFS 535

Query:    59 ASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQS 118
             A+ P   +       + + + + V + ++ I     C+   F  C +  K   LL L+  
Sbjct:   536 ATFPDSVQEA----ARAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGI 591

Query:   119 DAPESGIIFVGEQSEK--SKKAGNAPSTTLLVDFLSNSYKGSSDV--LLLEEEMNFNSRA 174
             D       +  E+S +  +KK     S   + D L+ S   S+ V  + +        R+
Sbjct:   592 DIDS----YTTEKSAEVYTKKTMVFVSQRAMADTLA-SILSSAQVPAITIHGAREQRERS 646

Query:   175 ASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              +L + R G   +L++T +A RG+D+    H+ N+D+P +  DY+HR GRTGR
Sbjct:   647 EALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR 699


>UNIPROTKB|P34689 [details] [associations]
            symbol:glh-1 "ATP-dependent RNA helicase glh-1"
            species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
            GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
            EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
            ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
            PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
            KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
            InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
        Length = 763

 Score = 180 (68.4 bits), Expect = 7.7e-12, P = 7.7e-12
 Identities = 58/233 (24%), Positives = 102/233 (43%)

Query:     1 MGSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCN--NRQTVFAS 58
             +G +    E+   KL+  +  V+DE D + +                     NRQT+  S
Sbjct:   476 VGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFS 535

Query:    59 ASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQS 118
             A+ P   +       + + + + V + ++ I     C+   F  C +  K   LL L+  
Sbjct:   536 ATFPDSVQEA----ARAFLRENYVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGI 591

Query:   119 DAPESGIIFVGEQSEK--SKKAGNAPSTTLLVDFLSNSYKGSSDV--LLLEEEMNFNSRA 174
             D       +  E+S +  +KK     S   + D L+ S   S+ V  + +        R+
Sbjct:   592 DIDS----YTTEKSAEVYTKKTMVFVSQRAMADTLA-SILSSAQVPAITIHGAREQRERS 646

Query:   175 ASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              +L + R G   +L++T +A RG+D+    H+ N+D+P +  DY+HR GRTGR
Sbjct:   647 EALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR 699


>UNIPROTKB|Q3AFI3 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 177 (67.4 bits), Expect = 8.8e-12, P = 8.8e-12
 Identities = 51/178 (28%), Positives = 91/178 (51%)

Query:    50 NNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKY 109
             N +QT+  SA++P     +   I++       V + V   K +P+ +   +    +  K 
Sbjct:   173 NRQQTLLFSATLPAP---IKTIIKKFLGGYKTVKL-VGREKTVPA-IRQVYYELPETEKI 227

Query:   110 QTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMN 169
             + L+S++ S+ P   I+F      ++KK          ++F   + KG      L  +M+
Sbjct:   228 EGLVSILNSELPIQAIVFC-----RTKK--RVDEVVEQLNFRGYAAKG------LHGDMS 274

Query:   170 FNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
                R  ++   + G   LLV+TD+AARG+D+P+ +H+ NFD+P++   Y+HR GRTGR
Sbjct:   275 QRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGR 332


>TIGR_CMR|CHY_0229 [details] [associations]
            symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
            family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
            ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
            KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
            BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
        Length = 430

 Score = 177 (67.4 bits), Expect = 8.8e-12, P = 8.8e-12
 Identities = 51/178 (28%), Positives = 91/178 (51%)

Query:    50 NNRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKY 109
             N +QT+  SA++P     +   I++       V + V   K +P+ +   +    +  K 
Sbjct:   173 NRQQTLLFSATLPAP---IKTIIKKFLGGYKTVKL-VGREKTVPA-IRQVYYELPETEKI 227

Query:   110 QTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMN 169
             + L+S++ S+ P   I+F      ++KK          ++F   + KG      L  +M+
Sbjct:   228 EGLVSILNSELPIQAIVFC-----RTKK--RVDEVVEQLNFRGYAAKG------LHGDMS 274

Query:   170 FNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
                R  ++   + G   LLV+TD+AARG+D+P+ +H+ NFD+P++   Y+HR GRTGR
Sbjct:   275 QRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGR 332


>DICTYBASE|DDB_G0280147 [details] [associations]
            symbol:ddx47 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
            GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
            EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
            RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
            EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
            Uniprot:Q54VT4
        Length = 546

 Score = 169 (64.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
 Identities = 43/126 (34%), Positives = 70/126 (55%)

Query:   143 STTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPE 202
             S+T +   L N   G+   + +  +M+   R ASL + +QG   +LV+TD+AARG+D+P 
Sbjct:   370 SSTKIAMMLRNLGFGA---IPINGDMDQGKRLASLNKFKQGTKSILVATDVAARGLDIPS 426

Query:   203 TTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
                + N+D+P ++ +Y+HR GRT R   S    T   I+T  ++ + QR E  LK K + 
Sbjct:   427 VDLVINYDVPTNSKEYVHRVGRTARAGNSGRAIT---IVTQYDVEMYQRIEFVLKKKLDS 483

Query:   263 LTLQTQ 268
                Q +
Sbjct:   484 FPCQEE 489

 Score = 46 (21.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query:    13 FKLESVQVLVIDEVDFLFN 31
             F L S++  ++DE D LF+
Sbjct:   258 FNLRSIKYFIMDEADRLFS 276


>UNIPROTKB|Q8EJQ5 [details] [associations]
            symbol:rhlB "ATP-dependent RNA helicase RhlB"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
            RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
            KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
        Length = 439

 Score = 161 (61.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 44/120 (36%), Positives = 62/120 (51%)

Query:   108 KYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEE 167
             K + LL+LI+ D PE  I+F    S       N      L  +L         V LL  +
Sbjct:   243 KMRLLLTLIEEDWPEKAIVF----SNTKHSCEN------LWSWLEGD---GHRVGLLTGD 289

Query:   168 MNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             +    R   L +  QG   +LV+TD+AARG+ + + +H+YN+DLP    DY+HR GRTGR
Sbjct:   290 VPQKKRIRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGR 349

 Score = 54 (24.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +   + + I  L ++Q +V+DE D +F+
Sbjct:   143 GRIIDYVRQGIINLNAIQAVVLDEADRMFD 172


>TIGR_CMR|SO_0407 [details] [associations]
            symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
            RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
            KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
        Length = 439

 Score = 161 (61.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 44/120 (36%), Positives = 62/120 (51%)

Query:   108 KYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEE 167
             K + LL+LI+ D PE  I+F    S       N      L  +L         V LL  +
Sbjct:   243 KMRLLLTLIEEDWPEKAIVF----SNTKHSCEN------LWSWLEGD---GHRVGLLTGD 289

Query:   168 MNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             +    R   L +  QG   +LV+TD+AARG+ + + +H+YN+DLP    DY+HR GRTGR
Sbjct:   290 VPQKKRIRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGR 349

 Score = 54 (24.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +   + + I  L ++Q +V+DE D +F+
Sbjct:   143 GRIIDYVRQGIINLNAIQAVVLDEADRMFD 172


>ASPGD|ASPL0000077157 [details] [associations]
            symbol:AN10557 species:162425 "Emericella nidulans"
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            [GO:0010628 "positive regulation of gene expression" evidence=IEA]
            [GO:0097308 "cellular response to farnesol" evidence=IEP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
            PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
        Length = 668

 Score = 178 (67.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 62/228 (27%), Positives = 103/228 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXX-XCNNRQTVFASAS 60
             G L  LIE+    L +++ L++DE D + +                   N+RQT+  SA+
Sbjct:   330 GRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSAT 389

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L     + + K D V + V  +      +  +        K   LL ++ +  
Sbjct:   390 FPRDIQML----ARDFLK-DYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDILHTHG 444

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLE 179
                  +IFV     ++K+  +A     L +FL N    ++ +     +     R  +L  
Sbjct:   445 TTGLTLIFV-----ETKRMADA-----LSEFLINQRFPATAI---HGDRTQRERERALEM 491

Query:   180 VRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              R G   +LV+T +AARG+D+P  TH+ N+DLP    DY+HR GRTGR
Sbjct:   492 FRSGRYPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGR 539


>UNIPROTKB|D4ADV9 [details] [associations]
            symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
            Uniprot:D4ADV9
        Length = 674

 Score = 178 (67.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 63/227 (27%), Positives = 104/227 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L+ V+ LV+DE D + +                     RQT+  SA+
Sbjct:   398 GRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSAT 457

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ KS+ + V V  +      +    +  G+  K + L+ ++++  
Sbjct:   458 FPEEIQRLAG----EFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEILRNIG 513

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   514 DERTMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 560

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NFDLP +  +Y+HR GRTGR
Sbjct:   561 RCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGR 607


>UNIPROTKB|Q91372 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
            "nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
            "mitochondrial cloud" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
            GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
            GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
            UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
            KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
        Length = 700

 Score = 178 (67.7 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 62/228 (27%), Positives = 100/228 (43%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++ K    L  ++ LV+DE D + +                     RQT+  SA+
Sbjct:   410 GRLLDIVSKEKIGLSKLRYLVLDEADRMLDMGFAPEIEKLMTKPGMPTKEKRQTLMFSAT 469

Query:    61 IPQH-RRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSD 119
              P+  RR   N     + KS+ + V V  +    S +    +   +  K + LL +++S 
Sbjct:   470 YPEEIRRLASN-----YLKSEHLFVVVGLVGGACSDVAQTVLEMRENGKMEKLLEILKSS 524

Query:   120 APESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLE 179
               E  +IFV  +    KKA           F S S  G        E+     R ++L +
Sbjct:   525 EKERTMIFVNTK----KKADFIAGYLCQEKFSSTSIHGD------REQYQ---RESALWD 571

Query:   180 VRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              R G   ++V T +AARG+D+    H+ N+D+P+   +Y+HR GRTGR
Sbjct:   572 FRTGKCTVIVCTAVAARGLDIENVQHVINYDVPKEVDEYVHRIGRTGR 619


>UNIPROTKB|Q9KV52 [details] [associations]
            symbol:rhlB "ATP-dependent RNA helicase RhlB"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
            KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
            ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
            KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
        Length = 438

 Score = 158 (60.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 30/65 (46%), Positives = 43/65 (66%)

Query:   163 LLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRA 222
             LL  ++    R   L +  QG   +LV+TD+AARG+ +P+ TH++N+DLP    DY+HR 
Sbjct:   285 LLTGDVPQKKRERILEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRI 344

Query:   223 GRTGR 227
             GRTGR
Sbjct:   345 GRTGR 349

 Score = 57 (25.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +    ++ +F L  +Q +V+DE D +F+
Sbjct:   143 GRIIDFYKQRVFNLNHIQAVVLDEADRMFD 172


>TIGR_CMR|VC_0305 [details] [associations]
            symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
            "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
            KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
            ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
            KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
        Length = 438

 Score = 158 (60.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 30/65 (46%), Positives = 43/65 (66%)

Query:   163 LLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRA 222
             LL  ++    R   L +  QG   +LV+TD+AARG+ +P+ TH++N+DLP    DY+HR 
Sbjct:   285 LLTGDVPQKKRERILEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRI 344

Query:   223 GRTGR 227
             GRTGR
Sbjct:   345 GRTGR 349

 Score = 57 (25.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +    ++ +F L  +Q +V+DE D +F+
Sbjct:   143 GRIIDFYKQRVFNLNHIQAVVLDEADRMFD 172


>ASPGD|ASPL0000014018 [details] [associations]
            symbol:fal1 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
            ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
            EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
            OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
        Length = 399

 Score = 162 (62.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 38/124 (30%), Positives = 72/124 (58%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L++  + ++  V  +  EM    R + + + RQG   +L+STD+ ARGID+ 
Sbjct:   272 NTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQ 331

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR+GR  F   K    + +TS+++ +L+  E     + +
Sbjct:   332 QVSLVINYDLPTNRENYIHRIGRSGR--FG-RKGVAINFVTSDDVRILRDIELYYSTQID 388

Query:   262 ELTL 265
             E+ +
Sbjct:   389 EMPM 392

 Score = 50 (22.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I +   +   +++LV+DE D L N
Sbjct:   152 GRVADMIRRRHLRTRHIKMLVLDEADELLN 181


>UNIPROTKB|Q73EU1 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
            OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
            RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
            DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
            GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
            Uniprot:Q73EU1
        Length = 525

 Score = 176 (67.0 bits), Expect = 1.8e-11, P = 1.8e-11
 Identities = 50/185 (27%), Positives = 86/185 (46%)

Query:    83 HVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAP 142
             H+ V A +     +   ++   +K K+  L  L+   +PE  I+F G    +  +   A 
Sbjct:   202 HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-GRTKRRVDELSEAL 260

Query:   143 STTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPE 202
             +   L  + +    G         ++    R + L + ++G   +LV+TD+AARG+D+  
Sbjct:   261 N---LRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISG 308

Query:   203 TTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
              TH+YNFD+P+    Y+HR GRTGR   + +K      +T  E   L+  E   K K + 
Sbjct:   309 VTHVYNFDIPQDPESYVHRIGRTGR---AGKKGIAMLFVTPRESGQLKNIERTTKRKMDR 365

Query:   263 LTLQT 267
             +   T
Sbjct:   366 MDAPT 370


>TIGR_CMR|BA_2109 [details] [associations]
            symbol:BA_2109 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 OMA:MMAINTI HSSP:P10081 HOGENOM:HOG000268811
            RefSeq:NP_844507.1 RefSeq:YP_018751.1 RefSeq:YP_028224.1
            ProteinModelPortal:Q81RE0 DNASU:1085806
            EnsemblBacteria:EBBACT00000011412 EnsemblBacteria:EBBACT00000014072
            EnsemblBacteria:EBBACT00000023039 GeneID:1085806 GeneID:2818618
            GeneID:2851363 KEGG:ban:BA_2109 KEGG:bar:GBAA_2109 KEGG:bat:BAS1961
            ProtClustDB:CLSK886848 BioCyc:BANT260799:GJAJ-2029-MONOMER
            BioCyc:BANT261594:GJ7F-2106-MONOMER Uniprot:Q81RE0
        Length = 389

 Score = 159 (61.0 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 37/102 (36%), Positives = 61/102 (59%)

Query:   164 LEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAG 223
             L  E +   R A++   R G   +L++TDIAARGID+ + TH+ + +LP +   Y+HR+G
Sbjct:   264 LHAEASKQEREATMRAFRGGKLEILLATDIAARGIDIDDLTHVIHLELPDTVDQYIHRSG 323

Query:   224 RTGRKPFSDEKWTVTSIITSEELFVLQRYENELK--FKSEEL 263
             RTGR     ++ TV S++T +E   L ++  +L   F  +E+
Sbjct:   324 RTGRM---GKEGTVVSLVTPQEERKLLQFAKKLGIVFTKQEM 362

 Score = 53 (23.7 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 23/107 (21%), Positives = 42/107 (39%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G + +LI     K+  V+ +V DE D +                     +RQ VF SA++
Sbjct:   125 GRILELIRMKKLKMHEVKTIVFDEFDQIVKQKMMGAVQDVIKSTM---RDRQLVFFSATM 181

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMK 108
                 +   +  +    +  +V V     K L   + H ++IC ++ K
Sbjct:   182 T---KAAEDAARDLAVEPQLVRVTRAESKSL---VEHTYIICERREK 222


>UNIPROTKB|A0R8U6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
            "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
            ProteinModelPortal:A0R8U6 STRING:A0R8U6
            EnsemblBacteria:EBBACT00000069056 GeneID:4546566
            GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
        Length = 528

 Score = 176 (67.0 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 50/185 (27%), Positives = 86/185 (46%)

Query:    83 HVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAP 142
             H+ V A +     +   ++   +K K+  L  L+   +PE  I+F G    +  +   A 
Sbjct:   202 HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-GRTKRRVDELSEAL 260

Query:   143 STTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPE 202
             +   L  + +    G         ++    R + L + ++G   +LV+TD+AARG+D+  
Sbjct:   261 N---LRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISG 308

Query:   203 TTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
              TH+YNFD+P+    Y+HR GRTGR   + +K      +T  E   L+  E   K K + 
Sbjct:   309 VTHVYNFDIPQDPESYVHRIGRTGR---AGKKGIAMLFVTPRESGQLKNIERTTKRKMDR 365

Query:   263 LTLQT 267
             +   T
Sbjct:   366 MDAPT 370


>UNIPROTKB|Q63GX5 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
            "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
            ProteinModelPortal:Q63GX5 STRING:Q63GX5
            EnsemblBacteria:EBBACT00000041470 GeneID:3022962
            GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
            BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
        Length = 528

 Score = 176 (67.0 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 50/185 (27%), Positives = 86/185 (46%)

Query:    83 HVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAP 142
             H+ V A +     +   ++   +K K+  L  L+   +PE  I+F G    +  +   A 
Sbjct:   202 HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-GRTKRRVDELSEAL 260

Query:   143 STTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPE 202
             +   L  + +    G         ++    R + L + ++G   +LV+TD+AARG+D+  
Sbjct:   261 N---LRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISG 308

Query:   203 TTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
              TH+YNFD+P+    Y+HR GRTGR   + +K      +T  E   L+  E   K K + 
Sbjct:   309 VTHVYNFDIPQDPESYVHRIGRTGR---AGKKGIAMLFVTPRESGQLKNIERTTKRKMDR 365

Query:   263 LTLQT 267
             +   T
Sbjct:   366 MDAPT 370


>UNIPROTKB|Q6HPE6 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:281309 "Bacillus thuringiensis serovar konkukian str.
            97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
            "ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
            ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
            GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
            PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
        Length = 528

 Score = 176 (67.0 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 50/185 (27%), Positives = 86/185 (46%)

Query:    83 HVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAP 142
             H+ V A +     +   ++   +K K+  L  L+   +PE  I+F G    +  +   A 
Sbjct:   202 HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-GRTKRRVDELSEAL 260

Query:   143 STTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPE 202
             +   L  + +    G         ++    R + L + ++G   +LV+TD+AARG+D+  
Sbjct:   261 N---LRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISG 308

Query:   203 TTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
              TH+YNFD+P+    Y+HR GRTGR   + +K      +T  E   L+  E   K K + 
Sbjct:   309 VTHVYNFDIPQDPESYVHRIGRTGR---AGKKGIAMLFVTPRESGQLKNIERTTKRKMDR 365

Query:   263 LTLQT 267
             +   T
Sbjct:   366 MDAPT 370


>UNIPROTKB|Q81VG0 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 176 (67.0 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 50/185 (27%), Positives = 86/185 (46%)

Query:    83 HVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAP 142
             H+ V A +     +   ++   +K K+  L  L+   +PE  I+F G    +  +   A 
Sbjct:   202 HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-GRTKRRVDELSEAL 260

Query:   143 STTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPE 202
             +   L  + +    G         ++    R + L + ++G   +LV+TD+AARG+D+  
Sbjct:   261 N---LRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISG 308

Query:   203 TTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
              TH+YNFD+P+    Y+HR GRTGR   + +K      +T  E   L+  E   K K + 
Sbjct:   309 VTHVYNFDIPQDPESYVHRIGRTGR---AGKKGIAMLFVTPRESGQLKNIERTTKRKMDR 365

Query:   263 LTLQT 267
             +   T
Sbjct:   366 MDAPT 370


>TIGR_CMR|BA_0247 [details] [associations]
            symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
            GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
            HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
            RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
            HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
            EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
            EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
            GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
            BioCyc:BANT260799:GJAJ-255-MONOMER
            BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
        Length = 528

 Score = 176 (67.0 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 50/185 (27%), Positives = 86/185 (46%)

Query:    83 HVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAP 142
             H+ V A +     +   ++   +K K+  L  L+   +PE  I+F G    +  +   A 
Sbjct:   202 HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-GRTKRRVDELSEAL 260

Query:   143 STTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPE 202
             +   L  + +    G         ++    R + L + ++G   +LV+TD+AARG+D+  
Sbjct:   261 N---LRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISG 308

Query:   203 TTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
              TH+YNFD+P+    Y+HR GRTGR   + +K      +T  E   L+  E   K K + 
Sbjct:   309 VTHVYNFDIPQDPESYVHRIGRTGR---AGKKGIAMLFVTPRESGQLKNIERTTKRKMDR 365

Query:   263 LTLQT 267
             +   T
Sbjct:   366 MDAPT 370


>UNIPROTKB|Q81IT9 [details] [associations]
            symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
            species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
            [GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
            ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
            STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
            GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
            PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
        Length = 533

 Score = 176 (67.0 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 50/185 (27%), Positives = 86/185 (46%)

Query:    83 HVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAP 142
             H+ V A +     +   ++   +K K+  L  L+   +PE  I+F G    +  +   A 
Sbjct:   202 HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-GRTKRRVDELSEAL 260

Query:   143 STTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPE 202
             +   L  + +    G         ++    R + L + ++G   +LV+TD+AARG+D+  
Sbjct:   261 N---LRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISG 308

Query:   203 TTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEE 262
              TH+YNFD+P+    Y+HR GRTGR   + +K      +T  E   L+  E   K K + 
Sbjct:   309 VTHVYNFDIPQDPESYVHRIGRTGR---AGKKGIAMLFVTPRESGQLKNIERTTKRKMDR 365

Query:   263 LTLQT 267
             +   T
Sbjct:   366 MDAPT 370


>TIGR_CMR|SPO_1443 [details] [associations]
            symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
            ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
            PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
        Length = 471

 Score = 164 (62.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 38/99 (38%), Positives = 59/99 (59%)

Query:   148 VDFLSNSY-KGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHI 206
             VD ++ S  K   D   +  +++ + R  +L   R+G   LLV++D+AARG+D+P  +H+
Sbjct:   265 VDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFREGKLRLLVASDVAARGLDVPSVSHV 324

Query:   207 YNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEE 245
             +NFD+P    DY+HR GRTGR    D K  +T  I  +E
Sbjct:   325 FNFDVPGHPEDYVHRIGRTGRAG-RDGK-AITLCIPRDE 361

 Score = 49 (22.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 18/66 (27%), Positives = 28/66 (42%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L    E+    L  VQ++V+DE D + +                    RQT+F SA++
Sbjct:   132 GRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFT---RQTLFFSATM 188

Query:    62 -PQHRR 66
              P+  R
Sbjct:   189 APEIER 194


>WB|WBGene00018776 [details] [associations]
            symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
            [GO:0040018 "positive regulation of multicellular organism growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
            GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
            GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
            HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
            RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
            PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
            KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
            InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
        Length = 970

 Score = 178 (67.7 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 65/224 (29%), Positives = 104/224 (46%)

Query:    12 IFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASIPQHRRFLHNC 71
             +  L  V  LV+DE D +F+                   ++QTV  SA+ P+H   L   
Sbjct:   449 VTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRP---DKQTVLFSATFPRHMEALARK 505

Query:    72 IQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPE-SGIIFVGE 130
             +  K      V + V     + S +    VIC +  K+  LL L+     E S I+FV  
Sbjct:   506 VLDK-----PVEILVGGKSVVCSDITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFV-- 558

Query:   131 QSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVS 190
               +K +KA +      +VD L  +  G + V  L   ++ + R +S+ + + G   +LV+
Sbjct:   559 --DKQEKADD------IVDQLMRT--GYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVA 608

Query:   191 TDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR---KPFS 231
             T +AARG+D+     + N+D P    DY+HR GRTGR   K ++
Sbjct:   609 TSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYA 652


>UNIPROTKB|Q6GWX0 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
            GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
            ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
            KEGG:ssc:431672 Uniprot:Q6GWX0
        Length = 722

 Score = 177 (67.4 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 63/227 (27%), Positives = 104/227 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L+ ++ LV+DE D + +                     RQT+  SA+
Sbjct:   422 GRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 481

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ KS+ + V V  +      +    +  G+  K + LL ++++  
Sbjct:   482 FPEEIQRL----AAEFLKSNYLFVAVGQVGGACRDVQQADLQVGQYSKREKLLEILRNIG 537

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   538 DERTMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 584

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NFDLP +  +Y+HR GRTGR
Sbjct:   585 RFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGR 631


>UNIPROTKB|F1MYC6 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
            evidence=IEA] [GO:0032880 "regulation of protein localization"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
            GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
            OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
            EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
            Uniprot:F1MYC6
        Length = 729

 Score = 176 (67.0 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 63/227 (27%), Positives = 103/227 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L  V+ LV+DE D + +                     RQT+  SA+
Sbjct:   426 GRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 485

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ KS+ + V V  +      +    +  G+  K + L+ ++++  
Sbjct:   486 FPEEIQRLAG----EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRNIG 541

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   542 DERTMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 588

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NFDLP +  +Y+HR GRTGR
Sbjct:   589 RCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGR 635


>UNIPROTKB|Q5W5U4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
            IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
            ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
            GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
            OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
        Length = 729

 Score = 176 (67.0 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 63/227 (27%), Positives = 103/227 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L  V+ LV+DE D + +                     RQT+  SA+
Sbjct:   426 GRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 485

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ KS+ + V V  +      +    +  G+  K + L+ ++++  
Sbjct:   486 FPEEIQRLAG----EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRNIG 541

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   542 DERTMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 588

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NFDLP +  +Y+HR GRTGR
Sbjct:   589 RCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGR 635


>UNIPROTKB|Q8EI96 [details] [associations]
            symbol:srmB "ATP-dependent RNA helicase SrmB"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
            HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
            RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
            KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
        Length = 420

 Score = 173 (66.0 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 55/191 (28%), Positives = 97/191 (50%)

Query:    79 SDVVHVHVNAIKPLPSCLHHRFVICGKK-MKYQTLLSLIQSDAPESGIIFVGEQSEKSKK 137
             +D + + V+A +   + +H    +   K  K+  L  L++ +  +  I+FV  +   S  
Sbjct:   202 NDPIEIDVDAPRKEKAKIHQWIHLADDKDHKFALLCHLLKQEDVKRAIVFVKTRDVVSSL 261

Query:   138 AGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARG 197
              G      +   F+    +G      +E++  F +    L    +G   +L++TD+AARG
Sbjct:   262 EGQLLQAGIPCAFM----RGD-----MEQKKRFQA----LSRFTKGEVNVLLATDVAARG 308

Query:   198 IDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFV---LQRY-E 253
             ID+ + +H+ NFD+PRSA  Y+HR GRTGR   +  K T  S+  + ++ +   ++RY E
Sbjct:   309 IDIDDISHVINFDMPRSADTYIHRIGRTGR---AGAKGTAISLAEAHDMRIVGKIERYIE 365

Query:   254 NELKFKS-EEL 263
               LK +  EEL
Sbjct:   366 QPLKRRIIEEL 376


>TIGR_CMR|SO_0947 [details] [associations]
            symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
            HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
            RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
            KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
        Length = 420

 Score = 173 (66.0 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 55/191 (28%), Positives = 97/191 (50%)

Query:    79 SDVVHVHVNAIKPLPSCLHHRFVICGKK-MKYQTLLSLIQSDAPESGIIFVGEQSEKSKK 137
             +D + + V+A +   + +H    +   K  K+  L  L++ +  +  I+FV  +   S  
Sbjct:   202 NDPIEIDVDAPRKEKAKIHQWIHLADDKDHKFALLCHLLKQEDVKRAIVFVKTRDVVSSL 261

Query:   138 AGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARG 197
              G      +   F+    +G      +E++  F +    L    +G   +L++TD+AARG
Sbjct:   262 EGQLLQAGIPCAFM----RGD-----MEQKKRFQA----LSRFTKGEVNVLLATDVAARG 308

Query:   198 IDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFV---LQRY-E 253
             ID+ + +H+ NFD+PRSA  Y+HR GRTGR   +  K T  S+  + ++ +   ++RY E
Sbjct:   309 IDIDDISHVINFDMPRSADTYIHRIGRTGR---AGAKGTAISLAEAHDMRIVGKIERYIE 365

Query:   254 NELKFKS-EEL 263
               LK +  EEL
Sbjct:   366 QPLKRRIIEEL 376


>MGI|MGI:102670 [details] [associations]
            symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            [GO:0032880 "regulation of protein localization" evidence=IMP]
            [GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
            part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
            "piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
            GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
            EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
            UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
            PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
            REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
            Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
            UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
            CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
            Uniprot:Q61496
        Length = 702

 Score = 175 (66.7 bits), Expect = 4.1e-11, P = 4.1e-11
 Identities = 63/227 (27%), Positives = 102/227 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L+ V+ LV+DE D + +                     RQT+  SA+
Sbjct:   397 GRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSAT 456

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L       + KS  + V V  +      +    +  G+  K + L+ ++++  
Sbjct:   457 FPEEIQRLAG----DFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRNIG 512

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   513 DERTMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 559

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NFDLP +  +Y+HR GRTGR
Sbjct:   560 RCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGR 606


>UNIPROTKB|D6RDK4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
            UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
            GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
            ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
            Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
            Bgee:D6RDK4 Uniprot:D6RDK4
        Length = 704

 Score = 175 (66.7 bits), Expect = 4.1e-11, P = 4.1e-11
 Identities = 62/227 (27%), Positives = 104/227 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L+ ++ LV+DE D + +                     RQT+  SA+
Sbjct:   404 GRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 463

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ KS+ + V V  +      +    +  G+  K + L+ ++++  
Sbjct:   464 FPEEIQRL----AAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIG 519

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   520 DERTMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 566

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NFDLP +  +Y+HR GRTGR
Sbjct:   567 RFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGR 613


>UNIPROTKB|Q9NQI0 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0000237
            "leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
            localization" evidence=IEA] [GO:0033391 "chromatoid body"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
            [GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
            GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
            OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
            EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
            IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
            RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
            ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
            PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
            PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
            Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
            KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
            GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
            HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
            InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
            NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
            Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
            Uniprot:Q9NQI0
        Length = 724

 Score = 175 (66.7 bits), Expect = 4.3e-11, P = 4.3e-11
 Identities = 62/227 (27%), Positives = 104/227 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L+ ++ LV+DE D + +                     RQT+  SA+
Sbjct:   424 GRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 483

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ KS+ + V V  +      +    +  G+  K + L+ ++++  
Sbjct:   484 FPEEIQRL----AAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIG 539

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   540 DERTMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 586

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NFDLP +  +Y+HR GRTGR
Sbjct:   587 RFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGR 633


>UNIPROTKB|Q4R5S7 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
            ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
        Length = 725

 Score = 175 (66.7 bits), Expect = 4.3e-11, P = 4.3e-11
 Identities = 62/227 (27%), Positives = 104/227 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L+ ++ LV+DE D + +                     RQT+  SA+
Sbjct:   425 GRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSAT 484

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ KS+ + V V  +      +    +  G+  K + L+ ++++  
Sbjct:   485 FPEEIQRL----AAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIG 540

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   541 DERTMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 587

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NFDLP +  +Y+HR GRTGR
Sbjct:   588 RCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGR 634


>UNIPROTKB|P25888 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
            PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
            ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
            MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
            EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
            KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
            EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
            BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
            Genevestigator:P25888 Uniprot:P25888
        Length = 454

 Score = 154 (59.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
 Identities = 34/86 (39%), Positives = 52/86 (60%)

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
             +R  +L + + G   +LV+TDIAARG+D+ E  H+ N++LP    DY+HR GRTGR   +
Sbjct:   283 ARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAAT 342

Query:   232 DEKWTVTSIITSEELFVLQRYENELK 257
              E     S++  +E  +L+  E  LK
Sbjct:   343 GE---ALSLVCVDEHKLLRDIEKLLK 365

 Score = 58 (25.5 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
 Identities = 24/97 (24%), Positives = 41/97 (42%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L  ++  KL+ V++LV+DE D + +                    RQ +  SA+ 
Sbjct:   134 GRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPA---KRQNLLFSATF 190

Query:    62 PQH-----RRFLHNCIQ----QKWTKSDVVHVHVNAI 89
                      + LHN ++    ++ T SD V  HV+ +
Sbjct:   191 SDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFV 227


>UNIPROTKB|Q81JK1 [details] [associations]
            symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:1392 "Bacillus anthracis" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 145 (56.1 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
 Identities = 33/80 (41%), Positives = 47/80 (58%)

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVT 238
             + R+G    LV+TD+AARGID+   TH+ N+D+P     Y+HR GRTGR   S +   +T
Sbjct:   287 DFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGK--AIT 344

Query:   239 SIITSEELFVLQRYENELKF 258
              I   E+ F L+  E  + F
Sbjct:   345 FITPYEDRF-LEEIEAYIGF 363

 Score = 70 (29.7 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
 Identities = 31/130 (23%), Positives = 47/130 (36%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +   IEK    LE ++ LVIDE D + N                    R T+  SA++
Sbjct:   131 GRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPT---KRMTMLFSATL 187

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+    L        T     H+ + A       + H      ++ K   L  +   + P
Sbjct:   188 PEDVERLSRTYMNAPT-----HIEIKAAGITTDKIEHTLFEVREEEKLSLLKDVTTIENP 242

Query:   122 ESGIIFVGEQ 131
             +S IIF   Q
Sbjct:   243 DSCIIFCRTQ 252


>TIGR_CMR|BA_5703 [details] [associations]
            symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
            InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
            RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
            SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
            EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
            EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
            GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
            ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
            BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
        Length = 481

 Score = 145 (56.1 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
 Identities = 33/80 (41%), Positives = 47/80 (58%)

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVT 238
             + R+G    LV+TD+AARGID+   TH+ N+D+P     Y+HR GRTGR   S +   +T
Sbjct:   287 DFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGK--AIT 344

Query:   239 SIITSEELFVLQRYENELKF 258
              I   E+ F L+  E  + F
Sbjct:   345 FITPYEDRF-LEEIEAYIGF 363

 Score = 70 (29.7 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
 Identities = 31/130 (23%), Positives = 47/130 (36%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +   IEK    LE ++ LVIDE D + N                    R T+  SA++
Sbjct:   131 GRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPT---KRMTMLFSATL 187

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+    L        T     H+ + A       + H      ++ K   L  +   + P
Sbjct:   188 PEDVERLSRTYMNAPT-----HIEIKAAGITTDKIEHTLFEVREEEKLSLLKDVTTIENP 242

Query:   122 ESGIIFVGEQ 131
             +S IIF   Q
Sbjct:   243 DSCIIFCRTQ 252


>UNIPROTKB|F1S758 [details] [associations]
            symbol:LOC100523329 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
            EMBL:CU928873 Ensembl:ENSSSCT00000016589 Uniprot:F1S758
        Length = 379

 Score = 165 (63.1 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
 Identities = 52/171 (30%), Positives = 89/171 (52%)

Query:   100 FVICG-KKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGS 158
             +V+CG +K KYQ L ++         IIF   Q+ ++ K        L V+ + + ++  
Sbjct:   212 YVLCGNRKDKYQALCNIYGGITIGQAIIFC--QTRRNAK-------WLTVEMMQDGHQ-- 260

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAID- 217
               V LL  E+  + RAA +   R G   +L++T++ ARGID+ + T + NFDLP +  + 
Sbjct:   261 --VSLLSGELTVDQRAAIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQAEE 318

Query:   218 -----YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
                  YLHR GRTGR  F  +K    ++I  ++L +L + ++      ++L
Sbjct:   319 PDYETYLHRIGRTGR--FG-KKGLAFNMIEVDKLPLLMKIQDHFNSNIKQL 366

 Score = 39 (18.8 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
 Identities = 6/23 (26%), Positives = 14/23 (60%)

Query:     9 EKHIFKLESVQVLVIDEVDFLFN 31
             ++ +  L  ++V V+DE D + +
Sbjct:   128 KRKLIDLTKIRVFVLDEADVMID 150


>TIGR_CMR|CPS_3401 [details] [associations]
            symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
            STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
            OMA:HLIKEHQ ProtClustDB:CLSK907013
            BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
        Length = 432

 Score = 142 (55.0 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
 Identities = 34/95 (35%), Positives = 56/95 (58%)

Query:   171 NSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPF 230
             + R+  L   + G   +L++TDIAARG+D+ +   + NF+LPRS  DY+HR GR+GR   
Sbjct:   292 SERSRVLDGFKAGDIEVLIATDIAARGLDIEKLPVVINFNLPRSPSDYMHRIGRSGR--- 348

Query:   231 SDEKWTVTSIITSEEL--FVLQRYENELKFKSEEL 263
             + E     S+I  E+   F +   +N+ + K E++
Sbjct:   349 AGEVGLAISLIDHEDYHHFSVIEKKNKFRLKREQV 383

 Score = 71 (30.1 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
 Identities = 31/127 (24%), Positives = 50/127 (39%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  LI  +  KL+ V+ LV+DE D + +                    +QT+  SA+ 
Sbjct:   146 GRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALLALTP---KKKQTLLFSATF 202

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+    L    Q+    ++ + + + +     S L  R     K  K   L  LIQ +  
Sbjct:   203 PEQVTTL---TQE--LLNNPIEIQLQSADA--STLVQRVFTVNKGEKTAVLAHLIQQEQW 255

Query:   122 ESGIIFV 128
                +IFV
Sbjct:   256 RQALIFV 262


>TIGR_CMR|SO_3783 [details] [associations]
            symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
            KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
            Uniprot:Q8EAV8
        Length = 535

 Score = 157 (60.3 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
 Identities = 33/82 (40%), Positives = 52/82 (63%)

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
             +R  +L + + G   +LV+TDIAARG+D+ +   + NFDLP    DY+HR GRTGR   +
Sbjct:   281 ARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGAT 340

Query:   232 DEKWTVTSIITSEELFVLQRYE 253
              +     S+++SEE+ +L+  E
Sbjct:   341 GQ---AVSLVSSEEIKLLKDIE 359

 Score = 55 (24.4 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
 Identities = 9/26 (34%), Positives = 17/26 (65%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  L++++  K   +++LV+DE D
Sbjct:   132 GRLLDLVQQNAVKFNQLEILVLDEAD 157


>UNIPROTKB|Q9KLE2 [details] [associations]
            symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
            process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
            ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
            KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
            Uniprot:Q9KLE2
        Length = 663

 Score = 173 (66.0 bits), Expect = 7.5e-11, P = 7.5e-11
 Identities = 45/167 (26%), Positives = 90/167 (53%)

Query:   100 FVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFL-SNSYKGS 158
             +V+ G + K + +  L++++  ++ I+FV  + +          T  L D+L +  +K +
Sbjct:   245 WVVKGVE-KDEAMARLLETEETDASIVFVRTRQD----------TERLADWLCARGFKAA 293

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDY 218
             +    L  ++  + R  ++  ++QG   +LV+TD+ ARG+D+P  TH+YN+D+P     Y
Sbjct:   294 A----LHGDIPQSLRERTVDHIKQGVIDILVATDVVARGLDVPRITHVYNYDIPFDVESY 349

Query:   219 LHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTL 265
             +HR GRTGR   +  K     ++ + ++ +L+  E   +   EE+ L
Sbjct:   350 IHRIGRTGR---AGRKGKAILLVRTNQIRMLRTIERVTRSSMEEIQL 393


>TIGR_CMR|VC_A0804 [details] [associations]
            symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
            "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
            ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
            KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
            Uniprot:Q9KLE2
        Length = 663

 Score = 173 (66.0 bits), Expect = 7.5e-11, P = 7.5e-11
 Identities = 45/167 (26%), Positives = 90/167 (53%)

Query:   100 FVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFL-SNSYKGS 158
             +V+ G + K + +  L++++  ++ I+FV  + +          T  L D+L +  +K +
Sbjct:   245 WVVKGVE-KDEAMARLLETEETDASIVFVRTRQD----------TERLADWLCARGFKAA 293

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDY 218
             +    L  ++  + R  ++  ++QG   +LV+TD+ ARG+D+P  TH+YN+D+P     Y
Sbjct:   294 A----LHGDIPQSLRERTVDHIKQGVIDILVATDVVARGLDVPRITHVYNYDIPFDVESY 349

Query:   219 LHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTL 265
             +HR GRTGR   +  K     ++ + ++ +L+  E   +   EE+ L
Sbjct:   350 IHRIGRTGR---AGRKGKAILLVRTNQIRMLRTIERVTRSSMEEIQL 393


>ZFIN|ZDB-GENE-990415-272 [details] [associations]
            symbol:vasa "vasa homolog" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
            EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
            ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
            GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
            NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
        Length = 716

 Score = 173 (66.0 bits), Expect = 8.4e-11, P = 8.4e-11
 Identities = 62/228 (27%), Positives = 105/228 (46%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  LI +    L  V+ LV+DE D + +                     RQT+  SA+
Sbjct:   413 GRLHDLIGRGKIGLSKVRYLVLDEADRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSAT 472

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + +       + K D + + V  +    S +    V   +  K   LL L+++  
Sbjct:   473 YPEDIQRM----AADFLKVDYIFLAVGVVGGACSDVEQTVVQVDQYSKRDQLLELLRATG 528

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSN-SYKGSSDVLLLEEEMNFNSRAASLLE 179
              E  ++FV     ++K++ +  +T L  + +S  S  G  +    + E     R  +L +
Sbjct:   529 NERTMVFV-----ETKRSADFIATFLCQEKISTTSIHGDRE----QRE-----REKALSD 574

Query:   180 VRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              R G   +LV+T +AARG+D+ +  H+ NFD+P S  +Y+HR GRTGR
Sbjct:   575 FRLGHCPVLVATSVAARGLDIEQVQHVVNFDMPSSIDEYVHRIGRTGR 622


>WB|WBGene00000479 [details] [associations]
            symbol:cgh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
            epithelium" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] [GO:0051729 "germline cell cycle switching, mitotic
            to meiotic cell cycle" evidence=IMP] [GO:0008219 "cell death"
            evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
            evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
            [GO:0007052 "mitotic spindle organization" evidence=IMP]
            [GO:0007276 "gamete generation" evidence=IMP] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IMP] [GO:0016071 "mRNA
            metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0000932
            "cytoplasmic mRNA processing body" evidence=IDA] [GO:0003724 "RNA
            helicase activity" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0017148 "negative regulation of translation"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
            GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
            GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
            GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
            GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
            GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
            RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
            DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
            PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
            GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
            WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
            HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
            NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            Uniprot:Q95YF3
        Length = 430

 Score = 150 (57.9 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
 Identities = 37/100 (37%), Positives = 53/100 (53%)

Query:   164 LEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAG 223
             +  +M  N R     + RQG    LV +D+  RGID+     + NFD PR+A  YLHR G
Sbjct:   310 IHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIG 369

Query:   224 RTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
             R+GR  F        ++IT E+   L+R E EL+ + E +
Sbjct:   370 RSGR--FG-HLGVAINLITYEDRHTLRRIEQELRTRIEPI 406

 Score = 60 (26.2 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  L+EK + K+E  + LV+DE D L +
Sbjct:   170 GRILDLMEKGVAKMEHCKTLVLDEADKLLS 199


>UNIPROTKB|Q95YF3 [details] [associations]
            symbol:cgh-1 "ATP-dependent RNA helicase cgh-1"
            species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
            GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
            GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
            GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
            GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
            GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
            RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
            DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
            PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
            GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
            WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
            HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
            NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            Uniprot:Q95YF3
        Length = 430

 Score = 150 (57.9 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
 Identities = 37/100 (37%), Positives = 53/100 (53%)

Query:   164 LEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAG 223
             +  +M  N R     + RQG    LV +D+  RGID+     + NFD PR+A  YLHR G
Sbjct:   310 IHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIG 369

Query:   224 RTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
             R+GR  F        ++IT E+   L+R E EL+ + E +
Sbjct:   370 RSGR--FG-HLGVAINLITYEDRHTLRRIEQELRTRIEPI 406

 Score = 60 (26.2 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  L+EK + K+E  + LV+DE D L +
Sbjct:   170 GRILDLMEKGVAKMEHCKTLVLDEADKLLS 199


>CGD|CAL0004095 [details] [associations]
            symbol:TIF species:5476 "Candida albicans" [GO:0003743
            "translation initiation factor activity" evidence=ISS] [GO:0006413
            "translational initiation" evidence=ISS] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0016281 "eukaryotic translation initiation factor 4F complex"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
            GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
            EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
            ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
            GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
            Uniprot:P87206
        Length = 397

 Score = 151 (58.2 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
 Identities = 36/122 (29%), Positives = 64/122 (52%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   V+FL+N  +     V  +  ++    R   + E R G   +L+STD+ ARGID+ 
Sbjct:   270 NTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQ 329

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T  ++ +++  E     + E
Sbjct:   330 QVSLVINYDLPANKENYIHRIGRGGR--FG-RKGVAINFVTDRDVGMMREIEKFYSTQIE 386

Query:   262 EL 263
             E+
Sbjct:   387 EM 388

 Score = 57 (25.1 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
 Identities = 9/26 (34%), Positives = 17/26 (65%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +  +IE+  FK + V++ ++DE D
Sbjct:   150 GRVLDMIERRYFKTDKVKMFILDEAD 175


>UNIPROTKB|P87206 [details] [associations]
            symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
            species:237561 "Candida albicans SC5314" [GO:0003743 "translation
            initiation factor activity" evidence=ISS] [GO:0006413
            "translational initiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
            GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
            EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
            ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
            GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
            Uniprot:P87206
        Length = 397

 Score = 151 (58.2 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
 Identities = 36/122 (29%), Positives = 64/122 (52%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   V+FL+N  +     V  +  ++    R   + E R G   +L+STD+ ARGID+ 
Sbjct:   270 NTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQ 329

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T  ++ +++  E     + E
Sbjct:   330 QVSLVINYDLPANKENYIHRIGRGGR--FG-RKGVAINFVTDRDVGMMREIEKFYSTQIE 386

Query:   262 EL 263
             E+
Sbjct:   387 EM 388

 Score = 57 (25.1 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
 Identities = 9/26 (34%), Positives = 17/26 (65%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +  +IE+  FK + V++ ++DE D
Sbjct:   150 GRVLDMIERRYFKTDKVKMFILDEAD 175


>WB|WBGene00001600 [details] [associations]
            symbol:glh-3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
            binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
            binding" evidence=IPI] [GO:0043621 "protein self-association"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
            RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
            SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
            EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
            KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
            InParanoid:O01836 NextBio:874651 Uniprot:O01836
        Length = 720

 Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 55/232 (23%), Positives = 97/232 (41%)

Query:     1 MGSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN--RQTVFAS 58
             +G +    E    KL+  + LV+DE D + +                   N  RQT+  S
Sbjct:   433 IGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFS 492

Query:    59 ASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQS 118
             A+ P   +       +K  + D   + ++ I     C+   F +C +  K   LL L+  
Sbjct:   493 ATFPSSVQEA----ARKLLREDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGI 548

Query:   119 DAPESGIIFVGEQSEKS--KKAGNAPSTTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAA 175
             D       +  E++     KK     +   + D L++    +    + +        R+A
Sbjct:   549 DIDT----YTTEKNSDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSA 604

Query:   176 SLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             +L   R G   +L++T +  RG+D+    H+ N+D+P +  DY+HR GRTGR
Sbjct:   605 ALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGR 656


>UNIPROTKB|O01836 [details] [associations]
            symbol:glh-3 "ATP-dependent RNA helicase glh-3"
            species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
            RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
            SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
            EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
            KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
            InParanoid:O01836 NextBio:874651 Uniprot:O01836
        Length = 720

 Score = 172 (65.6 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 55/232 (23%), Positives = 97/232 (41%)

Query:     1 MGSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN--RQTVFAS 58
             +G +    E    KL+  + LV+DE D + +                   N  RQT+  S
Sbjct:   433 IGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFS 492

Query:    59 ASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQS 118
             A+ P   +       +K  + D   + ++ I     C+   F +C +  K   LL L+  
Sbjct:   493 ATFPSSVQEA----ARKLLREDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGI 548

Query:   119 DAPESGIIFVGEQSEKS--KKAGNAPSTTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAA 175
             D       +  E++     KK     +   + D L++    +    + +        R+A
Sbjct:   549 DIDT----YTTEKNSDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSA 604

Query:   176 SLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             +L   R G   +L++T +  RG+D+    H+ N+D+P +  DY+HR GRTGR
Sbjct:   605 ALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGR 656


>CGD|CAL0004058 [details] [associations]
            symbol:DBP8 species:5476 "Candida albicans" [GO:0030686 "90S
            preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
            SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
            from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
            "endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0004058 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AACQ01000165 EMBL:AACQ01000186
            RefSeq:XP_711718.1 RefSeq:XP_712192.1 ProteinModelPortal:Q59PR3
            STRING:Q59PR3 GeneID:3646191 GeneID:3646692 KEGG:cal:CaO19.13973
            KEGG:cal:CaO19.6652 KO:K14778 Uniprot:Q59PR3
        Length = 440

 Score = 169 (64.5 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 69/260 (26%), Positives = 110/260 (42%)

Query:     9 EKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASIPQHRRFL 68
             E+ I  L  V+ LV+DE D L +                  + RQT+  +A+I    R L
Sbjct:   139 EETISGLRRVKYLVLDEADRLLSNSFGSDLQRCFDVLPTS-DKRQTLLFTATITDAVRAL 197

Query:    69 HNCIQQKWTKSDVVHVH-VNAIKP--LPSCLHHRFVICGKKMKYQTLLSLIQSDA--PES 123
                 +        V +H V  +    +PS L   +V     +K   L S++  +     +
Sbjct:   198 KE--KPPTPGKPPVFMHEVETVDKVAIPSTLQISYVFVPSYVKEAYLNSILHLEQFKDST 255

Query:   124 GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQG 183
              +IFV     ++  A         +DF          V  L  EM  + R  SL   + G
Sbjct:   256 AVIFVN----RTTTAEVLRRMLRKLDFR---------VASLHSEMPQSERTNSLHRFKAG 302

Query:   184 GGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITS 243
                +L++TD+A+RG+D+P    + NFD+P    D++HR GRT R   +  K    SII  
Sbjct:   303 AARILIATDVASRGLDIPTVELVINFDIPADPDDFIHRVGRTAR---AGRKGDAVSIIGE 359

Query:   244 EELFVLQRYENELKFKSEEL 263
             +++  +Q  E  +  K E L
Sbjct:   360 KDIDRIQSIEERINKKMELL 379


>WB|WBGene00001599 [details] [associations]
            symbol:glh-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
            development" evidence=IMP] [GO:0016070 "RNA metabolic process"
            evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
            "RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
            binding" evidence=IPI] [GO:0043621 "protein self-association"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
            GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
            EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
            ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
            PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
            KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
            HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
            Uniprot:Q966L9
        Length = 974

 Score = 173 (66.0 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 56/233 (24%), Positives = 100/233 (42%)

Query:     1 MGSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCN--NRQTVFAS 58
             +G +    E+   KL+  +  V+DE D + +                     NRQT+  S
Sbjct:   687 VGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFS 746

Query:    59 ASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQS 118
             A+ P     +    +    K   + + ++ I     C+   F  C +  K   LL ++  
Sbjct:   747 ATFPDS---VQEAARNH-LKEGYIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGI 802

Query:   119 DAPESGIIFVGEQSEK--SKKAGNAPSTTLLVDFLSNSYKGSSDV--LLLEEEMNFNSRA 174
             D       +  E++ +  +KK     S   + D L+ S   S+ V  + +        R+
Sbjct:   803 DIDS----YTTEKNSEVYTKKTIVFVSQRAMADTLA-SILSSAQVPAITIHGAREQRERS 857

Query:   175 ASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              +L + R G   +L++T +A RG+D+    H+ N+D+P +  DY+HR GRTGR
Sbjct:   858 EALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR 910


>UNIPROTKB|Q966L9 [details] [associations]
            symbol:glh-2 "ATP-dependent RNA helicase glh-2"
            species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
            GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
            EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
            ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
            PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
            KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
            HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
            Uniprot:Q966L9
        Length = 974

 Score = 173 (66.0 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 56/233 (24%), Positives = 100/233 (42%)

Query:     1 MGSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCN--NRQTVFAS 58
             +G +    E+   KL+  +  V+DE D + +                     NRQT+  S
Sbjct:   687 VGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFS 746

Query:    59 ASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQS 118
             A+ P     +    +    K   + + ++ I     C+   F  C +  K   LL ++  
Sbjct:   747 ATFPDS---VQEAARNH-LKEGYIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGI 802

Query:   119 DAPESGIIFVGEQSEK--SKKAGNAPSTTLLVDFLSNSYKGSSDV--LLLEEEMNFNSRA 174
             D       +  E++ +  +KK     S   + D L+ S   S+ V  + +        R+
Sbjct:   803 DIDS----YTTEKNSEVYTKKTIVFVSQRAMADTLA-SILSSAQVPAITIHGAREQRERS 857

Query:   175 ASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              +L + R G   +L++T +A RG+D+    H+ N+D+P +  DY+HR GRTGR
Sbjct:   858 EALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR 910


>UNIPROTKB|I3LRT7 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
            GeneTree:ENSGT00620000087942 EMBL:CU929824
            Ensembl:ENSSSCT00000031627 OMA:VGDERTM Uniprot:I3LRT7
        Length = 290

 Score = 165 (63.1 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 59/214 (27%), Positives = 98/214 (45%)

Query:    15 LESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASASIPQHRRFLHNCIQ 73
             L  V+ LV+DE D + +                     RQT+  SA+ P+  + L     
Sbjct:     4 LRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG--- 60

Query:    74 QKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSE 133
              ++ KS+ + V V  +      +    +  G+  K + L+ ++++   E  ++FV    E
Sbjct:    61 -EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRNIGDERTMVFV----E 115

Query:   134 KSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDI 193
               KKA        +  FL    K S+  +  + E     R  +L + R G   +LV+T +
Sbjct:   116 TKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDFRCGKCPVLVATSV 166

Query:   194 AARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             AARG+D+    H+ NFDLP +  +Y+HR GRTGR
Sbjct:   167 AARGLDIENVQHVINFDLPSTIDEYVHRIGRTGR 200


>UNIPROTKB|F1RVF0 [details] [associations]
            symbol:LOC100512980 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:ESATTFE
            Ensembl:ENSSSCT00000012145 Uniprot:F1RVF0
        Length = 462

 Score = 165 (63.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
 Identities = 52/171 (30%), Positives = 89/171 (52%)

Query:   100 FVICG-KKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGS 158
             +V+CG +K KYQ L ++         IIF   Q+ ++ K        L V+ + + ++  
Sbjct:   295 YVLCGNRKDKYQALCNIYGGITIGQAIIFC--QTRRNAK-------WLTVEMMQDGHQ-- 343

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAID- 217
               V LL  E+  + RAA +   R G   +L++T++ ARGID+ + T + NFDLP +  + 
Sbjct:   344 --VSLLRGELTVDQRAAIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQAEE 401

Query:   218 -----YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
                  YLHR GRTGR  F  +K    ++I  ++L +L + ++      ++L
Sbjct:   402 PDYETYLHRIGRTGR--FG-KKGLAFNMIEVDKLPLLMKIQDHFNSNIKQL 449

 Score = 39 (18.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
 Identities = 6/23 (26%), Positives = 14/23 (60%)

Query:     9 EKHIFKLESVQVLVIDEVDFLFN 31
             ++ +  L  ++V V+DE D + +
Sbjct:   211 KRKLIDLTKIRVFVLDEADVMID 233


>TAIR|locus:2091191 [details] [associations]
            symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
            hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
            [GO:0035145 "exon-exon junction complex" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
            GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
            EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
            OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
            IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
            ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
            PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
            KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
            PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
            GermOnline:AT3G19760 Uniprot:Q94A52
        Length = 408

 Score = 153 (58.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
 Identities = 37/124 (29%), Positives = 67/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+LS   +  +  V  +  +M    R A + E R G   +L++TD+ ARGID+ 
Sbjct:   282 NTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQ 341

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +   Y+HR GR+GR  F   K    + + S+++ +L+  E     + +
Sbjct:   342 QVSLVINYDLPNNRELYIHRIGRSGR--FG-RKGVAINFVKSDDIKILRDIEQYYSTQID 398

Query:   262 ELTL 265
             E+ +
Sbjct:   399 EMPM 402

 Score = 53 (23.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
 Identities = 7/26 (26%), Positives = 18/26 (69%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +C +I++   +  ++++L++DE D
Sbjct:   162 GRVCDMIKRRSLRTRAIKLLILDESD 187


>RGD|1308793 [details] [associations]
            symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
            species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
            evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
            [GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISO] [GO:0032880 "regulation of protein localization"
            evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
            [GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
            evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
            GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
            RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
            SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
            NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
        Length = 713

 Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 62/227 (27%), Positives = 103/227 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L+ V+ LV+DE D + +                     RQT+  SA+
Sbjct:   409 GRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSAT 468

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ KS+ + V V  +      +    +  G   K + L+ ++++  
Sbjct:   469 FPEEIQRLAG----EFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILRNIG 524

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   525 DERPMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 571

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NF+LP +  +Y+HR GRTGR
Sbjct:   572 RCGKCPVLVATSVAARGLDIENVQHVINFNLPSTIDEYVHRIGRTGR 618


>UNIPROTKB|Q64060 [details] [associations]
            symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
            GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
            RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
            SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
            NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
        Length = 713

 Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 62/227 (27%), Positives = 103/227 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L+ V+ LV+DE D + +                     RQT+  SA+
Sbjct:   409 GRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSAT 468

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++ KS+ + V V  +      +    +  G   K + L+ ++++  
Sbjct:   469 FPEEIQRLAG----EFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILRNIG 524

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   525 DERPMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 571

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NF+LP +  +Y+HR GRTGR
Sbjct:   572 RCGKCPVLVATSVAARGLDIENVQHVINFNLPSTIDEYVHRIGRTGR 618


>ZFIN|ZDB-GENE-080204-77 [details] [associations]
            symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
            EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
            Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
        Length = 719

 Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 63/224 (28%), Positives = 106/224 (47%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIK-PLPSCLHHRFVICGKKMKY 109
             +RQTV  SA+ P   R L     + + K D + V+V  +     + +    +   +  K 
Sbjct:   456 DRQTVMTSATWPPGVRRL----AKSYLK-DPMMVYVGTLDLAAVNTVQQTVLFVQEDEKK 510

Query:   110 QTLLSLIQSDAP-ESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEM 168
               +   I    P +  +IFVG    K  KA +  S   L      S  G        E+ 
Sbjct:   511 DYVFDFIHRMEPLDKVLIFVG----KKLKADDLSSDLCLQGIAVQSLHGD------REQC 560

Query:   169 NFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRK 228
             +   R  +L + + G   +LV+TD+A+RG+D+ + TH++N+D PR+  +Y+HR GRTGR 
Sbjct:   561 D---REEALQDFKDGRVRILVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRA 617

Query:   229 PFSDEKWTVTSI----ITSEELFVLQRYENELKFKSEELTLQTQ 268
               S E  T+ +     + +E + +L+R   ++    EEL L  +
Sbjct:   618 GRSGESVTLVTREDWRVAAELITILERSGQDVP---EELVLMAE 658


>UNIPROTKB|Q0C4B9 [details] [associations]
            symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
            GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
            BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
        Length = 536

 Score = 169 (64.5 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 60/216 (27%), Positives = 103/216 (47%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQ 110
             NRQT+  SA+ P   + L    Q+   K +V      A + +   +       GK  +  
Sbjct:   180 NRQTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTA-ETISQFVVKLPTNDGKARR-T 237

Query:   111 TLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSY-KGSSDVLLLEEEMN 169
              L  +I++   ++GI+F   + E              VD ++ S  K   D   +  ++ 
Sbjct:   238 ALRRVIEATNVKNGIVFCNRKVE--------------VDIVAASLTKHGHDAAPIHGDLP 283

Query:   170 FNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKP 229
              + R+ +L   R G   LLV++D+AARG+D+P+  H++NF  P    DY+HR GRTGR  
Sbjct:   284 QSVRSETLQRFRDGKLKLLVASDVAARGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAG 343

Query:   230 FSDEKWTVTSIITSEEL-FVLQRYENEL-KFKSEEL 263
              + E +TV +    +   FV++  + ++ +F  E L
Sbjct:   344 RTGESYTVVTPADDKSWGFVVKMIKKDVPEFMPEGL 379


>UNIPROTKB|F1S0I6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
            EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
            Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
        Length = 650

 Score = 169 (64.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 55/181 (30%), Positives = 92/181 (50%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLP-SCLHHRFVICGKKMKY 109
             +RQTV  SA+ P   R L     Q + K  ++ V+V  +  +  S +    ++  +  K 
Sbjct:   422 DRQTVMTSATWPYAVRRL----AQSYLKEPMI-VYVGTLDLVAVSTVKQNIIVTTEDEKR 476

Query:   110 QTLLSLIQSDAPESG-IIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLL--LEE 166
               + + I+S +P+   IIFV      S+KA        + D LS+   G   + +  L  
Sbjct:   477 SHIQTFIESMSPKDKVIIFV------SRKA--------VADHLSSDL-GIRHISVESLHG 521

Query:   167 EMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTG 226
                   R  +L   + G   +L++TD+A+RG+D+ + TH+YN+D PR+  +Y+HR GRTG
Sbjct:   522 NREQGDRERALKNFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTG 581

Query:   227 R 227
             R
Sbjct:   582 R 582


>WB|WBGene00006888 [details] [associations]
            symbol:vbh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0032502 "developmental process"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
            germ-line" evidence=IMP] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
            evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
            GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
            GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
            ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
            MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
            EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
            GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
            WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
            ArrayExpress:Q65XX1 Uniprot:Q65XX1
        Length = 660

 Score = 169 (64.5 bits), Expect = 2.6e-10, P = 2.6e-10
 Identities = 60/229 (26%), Positives = 103/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  +IE+    L   + LV+DE D + +                    R T   SA+ 
Sbjct:   282 GRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATF 341

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+  + L     + + K + + + V  +      +  R +   +  K   L+ ++ ++  
Sbjct:   342 PKEIQVL----AKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHS 397

Query:   122 ESGI-IFVGEQSEKSKKAGNAPSTTL-LVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLE 179
             E+ + +FV     ++K+  N  +  L      S S  G  D+  +E E N        LE
Sbjct:   398 ENLVLVFV-----ETKRGANELAYFLNRQQIRSVSIHG--DLKQIERERN--------LE 442

Query:   180 V-RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+P   H+ N+DLP  + +Y+HR GRTGR
Sbjct:   443 LFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGR 491


>SGD|S000001212 [details] [associations]
            symbol:DBP8 "ATPase, putative RNA helicase" species:4932
            "Saccharomyces cerevisiae" [GO:0030686 "90S preribosome"
            evidence=IDA] [GO:0000472 "endonucleolytic cleavage to generate
            mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006364 "rRNA processing" evidence=IEA] [GO:0000447
            "endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
            rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
            rRNA, LSU-rRNA)" evidence=IMP] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IMP] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000001212 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:U00027 GO:GO:0030686
            GO:GO:0004004 GO:GO:0000447 GO:GO:0000472 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
            OrthoDB:EOG4PP1RW PIR:S48908 RefSeq:NP_012039.1
            ProteinModelPortal:P38719 SMR:P38719 DIP:DIP-5628N IntAct:P38719
            MINT:MINT-485349 STRING:P38719 PaxDb:P38719 PeptideAtlas:P38719
            EnsemblFungi:YHR169W GeneID:856574 KEGG:sce:YHR169W CYGD:YHR169w
            GeneTree:ENSGT00700000105515 OMA:FRNLCAI NextBio:982426
            Genevestigator:P38719 GermOnline:YHR169W GO:GO:0000480
            Uniprot:P38719
        Length = 431

 Score = 166 (63.5 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 62/253 (24%), Positives = 105/253 (41%)

Query:    15 LESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASIPQHRRFLHNCIQQ 74
             L   + LV+DE D L                    + RQT+  +A+I    + L N   Q
Sbjct:   146 LMRAKYLVLDEADILLTSTFADHLATCISALPPK-DKRQTLLFTATITDQVKSLQNAPVQ 204

Query:    75 KWTKSDVVHVHVNAIK--PLPSCLHHRFVICGKKMKYQTLLSLIQSDAPES--GIIFVGE 130
             K  K  +    V ++    +PS L   +++  + +K   L  L+  +  E+   IIFV  
Sbjct:   205 KG-KPPLFAYQVESVDNVAIPSTLKIEYILVPEHVKEAYLYQLLTCEEYENKTAIIFVNR 263

Query:   131 QSEKSKKAGNAPSTTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLV 189
                           T+  + L  + K     V  L  +M    R  SL   R     +L+
Sbjct:   264 --------------TMTAEILRRTLKQLEVRVASLHSQMPQQERTNSLHRFRANAARILI 309

Query:   190 STDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVL 249
             +TD+A+RG+D+P    + N+D+P     ++HR+GRT R   +       S +T  ++  +
Sbjct:   310 ATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTAR---AGRIGDAISFVTQRDVSRI 366

Query:   250 QRYENELKFKSEE 262
             Q  E+ +  K  E
Sbjct:   367 QAIEDRINKKMTE 379


>TAIR|locus:2030285 [details] [associations]
            symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
            "plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
            membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
            to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
            stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
            GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
            ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
            EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
            RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
            SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
            EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
            GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
            PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
            Uniprot:Q9CAI7
        Length = 414

 Score = 159 (61.0 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
 Identities = 40/116 (34%), Positives = 65/116 (56%)

Query:   143 STTLLVDFLSNSYKGSSD-VLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L++  +     V     +M+ N+R   + E R G   +L++TD+ ARGID+ 
Sbjct:   288 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 347

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEE---LFVLQRYEN 254
             + + + NFDLP    +YLHR GR+GR  F   K    + +TSE+   +  +QR+ N
Sbjct:   348 QVSLVINFDLPTQPENYLHRIGRSGR--FG-RKGVAINFMTSEDERMMADIQRFYN 400

 Score = 42 (19.8 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
 Identities = 6/26 (23%), Positives = 16/26 (61%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +  L+ +   + +++++ V+DE D
Sbjct:   168 GRVFDLLRRQSLRADAIKMFVLDEAD 193


>ZFIN|ZDB-GENE-980526-150 [details] [associations]
            symbol:pl10 "pl10" species:7955 "Danio rerio"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
            EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
            ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
            CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
            Uniprot:Q6PBB2
        Length = 688

 Score = 168 (64.2 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 60/228 (26%), Positives = 100/228 (43%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+    LV+DE D + +                     RQT+  SA+
Sbjct:   357 GRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSAT 416

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L     +     D + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   417 FPKEIQILARDFLE-----DYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATG 471

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLE 179
              +S  ++FV     ++KK  +A     L DFL   Y+       +  + +   R  +L +
Sbjct:   472 KDSLTLVFV-----ETKKGADA-----LEDFL---YREGYACTSIHGDRSQRDREEALHQ 518

Query:   180 VRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   519 FRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 566


>UNIPROTKB|Q2NL22 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045727 "positive regulation of translation"
            evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
            GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
            GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
            GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
            IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
            ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
            Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
            InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
            Uniprot:Q2NL22
        Length = 411

 Score = 153 (58.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 35/124 (28%), Positives = 68/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+   + ++  V  +  +M    R + + E R G   +L+STD+ ARG+D+P
Sbjct:   285 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 344

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + I N+DLP +   Y+HR GR+GR      K    + + ++++ +L+  E     + +
Sbjct:   345 QVSLIINYDLPNNRELYIHRIGRSGRY---GRKGVAINFVKNDDIRILRDIEQYYSTQID 401

Query:   262 ELTL 265
             E+ +
Sbjct:   402 EMPM 405

 Score = 49 (22.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I +   +  ++++LV+DE D + N
Sbjct:   165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLN 194


>UNIPROTKB|E2RDZ4 [details] [associations]
            symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
            "negative regulation of translation" evidence=IEA] [GO:0008143
            "poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
            GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
            EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
            GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
        Length = 411

 Score = 153 (58.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 35/124 (28%), Positives = 68/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+   + ++  V  +  +M    R + + E R G   +L+STD+ ARG+D+P
Sbjct:   285 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 344

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + I N+DLP +   Y+HR GR+GR      K    + + ++++ +L+  E     + +
Sbjct:   345 QVSLIINYDLPNNRELYIHRIGRSGRY---GRKGVAINFVKNDDIRILRDIEQYYSTQID 401

Query:   262 ELTL 265
             E+ +
Sbjct:   402 EMPM 405

 Score = 49 (22.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I +   +  ++++LV+DE D + N
Sbjct:   165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLN 194


>UNIPROTKB|P38919 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0048026 "positive
            regulation of mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
            of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
            evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IDA] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
            "cytokine-mediated signaling pathway" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
            GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
            GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
            GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
            PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
            PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
            OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
            EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
            EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
            UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
            SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
            STRING:P38919 PhosphoSite:P38919 DMDM:20532400
            REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
            PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
            KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
            HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
            InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
            EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
            CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
            Uniprot:P38919
        Length = 411

 Score = 153 (58.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 35/124 (28%), Positives = 68/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+   + ++  V  +  +M    R + + E R G   +L+STD+ ARG+D+P
Sbjct:   285 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 344

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + I N+DLP +   Y+HR GR+GR      K    + + ++++ +L+  E     + +
Sbjct:   345 QVSLIINYDLPNNRELYIHRIGRSGRY---GRKGVAINFVKNDDIRILRDIEQYYSTQID 401

Query:   262 ELTL 265
             E+ +
Sbjct:   402 EMPM 405

 Score = 49 (22.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I +   +  ++++LV+DE D + N
Sbjct:   165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLN 194


>UNIPROTKB|A6M931 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
            "regulation of translation" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
            UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
            GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
        Length = 411

 Score = 153 (58.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 35/124 (28%), Positives = 68/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+   + ++  V  +  +M    R + + E R G   +L+STD+ ARG+D+P
Sbjct:   285 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 344

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + I N+DLP +   Y+HR GR+GR      K    + + ++++ +L+  E     + +
Sbjct:   345 QVSLIINYDLPNNRELYIHRIGRSGRY---GRKGVAINFVKNDDIRILRDIEQYYSTQID 401

Query:   262 ELTL 265
             E+ +
Sbjct:   402 EMPM 405

 Score = 49 (22.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I +   +  ++++LV+DE D + N
Sbjct:   165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLN 194


>UNIPROTKB|F1RZ83 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
            translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
            EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
            Uniprot:F1RZ83
        Length = 411

 Score = 153 (58.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 35/124 (28%), Positives = 68/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+   + ++  V  +  +M    R + + E R G   +L+STD+ ARG+D+P
Sbjct:   285 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 344

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + I N+DLP +   Y+HR GR+GR      K    + + ++++ +L+  E     + +
Sbjct:   345 QVSLIINYDLPNNRELYIHRIGRSGRY---GRKGVAINFVKNDDIRILRDIEQYYSTQID 401

Query:   262 ELTL 265
             E+ +
Sbjct:   402 EMPM 405

 Score = 49 (22.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I +   +  ++++LV+DE D + N
Sbjct:   165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLN 194


>RGD|1591139 [details] [associations]
            symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
            isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
            "positive regulation of translation" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
            transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
            IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
            ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
            KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
        Length = 411

 Score = 153 (58.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 35/124 (28%), Positives = 68/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+   + ++  V  +  +M    R + + E R G   +L+STD+ ARG+D+P
Sbjct:   285 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 344

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + I N+DLP +   Y+HR GR+GR      K    + + ++++ +L+  E     + +
Sbjct:   345 QVSLIINYDLPNNRELYIHRIGRSGRY---GRKGVAINFVKNDDIRILRDIEQYYSTQID 401

Query:   262 ELTL 265
             E+ +
Sbjct:   402 EMPM 405

 Score = 49 (22.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I +   +  ++++LV+DE D + N
Sbjct:   165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLN 194


>UNIPROTKB|Q5ZM36 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
            RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
            SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
            InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
        Length = 412

 Score = 153 (58.9 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
 Identities = 35/124 (28%), Positives = 68/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+   + ++  V  +  +M    R + + E R G   +L+STD+ ARG+D+P
Sbjct:   286 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 345

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + I N+DLP +   Y+HR GR+GR      K    + + ++++ +L+  E     + +
Sbjct:   346 QVSLIINYDLPNNRELYIHRIGRSGRY---GRKGVAINFVKNDDIRILRDIEQYYSTQID 402

Query:   262 ELTL 265
             E+ +
Sbjct:   403 EMPM 406

 Score = 49 (22.3 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I +   +  ++++LV+DE D + N
Sbjct:   166 GRVFDMIRRRSLRTRAIKMLVLDEADEMLN 195


>SGD|S000005730 [details] [associations]
            symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
            helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
            [GO:0033592 "RNA strand annealing activity" evidence=IDA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
            EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
            EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
            RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
            DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
            PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
            GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
            KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
            GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
        Length = 604

 Score = 167 (63.8 bits), Expect = 4.2e-10, P = 4.2e-10
 Identities = 44/150 (29%), Positives = 74/150 (49%)

Query:    79 SDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKA 138
             SD + + V  +      +  + +    + K   LL L+ +      +IFV     ++K+ 
Sbjct:   357 SDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFV-----ETKRM 411

Query:   139 GNAPSTTLLVDFL-SNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARG 197
              +      L DFL   +++ ++    +  +   + R  +L   R G   LLV+T +AARG
Sbjct:   412 ADQ-----LTDFLIMQNFRATA----IHGDRTQSERERALAAFRSGAATLLVATAVAARG 462

Query:   198 IDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             +D+P  TH+ N+DLP    DY+HR GRTGR
Sbjct:   463 LDIPNVTHVINYDLPSDVDDYVHRIGRTGR 492


>UNIPROTKB|P0A8J8 [details] [associations]
            symbol:rhlB "RhlB" species:83333 "Escherichia coli K-12"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006401 "RNA
            catabolic process" evidence=IDA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0006401 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:M87049 GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:M83316 EMBL:X56310
            PIR:G65181 RefSeq:NP_418227.1 RefSeq:YP_491659.1
            ProteinModelPortal:P0A8J8 SMR:P0A8J8 DIP:DIP-35644N IntAct:P0A8J8
            PaxDb:P0A8J8 PRIDE:P0A8J8 EnsemblBacteria:EBESCT00000001927
            EnsemblBacteria:EBESCT00000015978 GeneID:12934326 GeneID:948290
            KEGG:ecj:Y75_p3395 KEGG:eco:b3780 PATRIC:32123051 EchoBASE:EB0837
            EcoGene:EG10844 HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY
            ProtClustDB:PRK04837 BioCyc:EcoCyc:EG10844-MONOMER
            BioCyc:ECOL316407:JW3753-MONOMER Genevestigator:P0A8J8
            Uniprot:P0A8J8
        Length = 421

 Score = 154 (59.3 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
 Identities = 42/120 (35%), Positives = 62/120 (51%)

Query:   108 KYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEE 167
             K + L +LI+ + P+  IIF   +    +  G+     L  D           V LL  +
Sbjct:   243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGH-----LAAD--------GHRVGLLTGD 289

Query:   168 MNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             +    R   L E  +G   +LV+TD+AARG+ +P  TH++N+DLP    DY+HR GRTGR
Sbjct:   290 VAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGR 349

 Score = 48 (22.0 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
 Identities = 9/30 (30%), Positives = 19/30 (63%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G L    +++   L ++QV+V+DE D +++
Sbjct:   143 GRLIDYAKQNHINLGAIQVVVLDEADRMYD 172


>UNIPROTKB|Q2TBP1 [details] [associations]
            symbol:DDX25 "ATP-dependent RNA helicase DDX25"
            species:9913 "Bos taurus" [GO:0006417 "regulation of translation"
            evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0033391
            "chromatoid body" evidence=ISS] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=ISS] [GO:0007286 "spermatid
            development" evidence=ISS] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
            GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q9UHL0
            HOVERGEN:HBG107989 EMBL:BC109867 IPI:IPI00724449
            RefSeq:NP_001033606.1 UniGene:Bt.14611 ProteinModelPortal:Q2TBP1
            SMR:Q2TBP1 PRIDE:Q2TBP1 GeneID:508962 KEGG:bta:508962 CTD:29118
            InParanoid:Q2TBP1 OrthoDB:EOG4NS3BD NextBio:20868762 Uniprot:Q2TBP1
        Length = 483

 Score = 162 (62.1 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
 Identities = 51/171 (29%), Positives = 89/171 (52%)

Query:   100 FVICG-KKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGS 158
             +V+CG +K KYQ L ++         IIF   Q+ ++ K        L V+ + + ++  
Sbjct:   316 YVLCGNRKDKYQALCNIYGGITIGQAIIFC--QTRRNAK-------WLTVEMMQDGHQ-- 364

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAID- 217
               V LL  E+  + RA+ +   R G   +L++T++ ARGID+ + T + NFDLP +  + 
Sbjct:   365 --VSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQAEE 422

Query:   218 -----YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
                  YLHR GRTGR  F  +K    ++I  ++L +L + ++      ++L
Sbjct:   423 PDYETYLHRIGRTGR--FG-KKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 470

 Score = 39 (18.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
 Identities = 6/23 (26%), Positives = 14/23 (60%)

Query:     9 EKHIFKLESVQVLVIDEVDFLFN 31
             ++ +  L  ++V V+DE D + +
Sbjct:   232 KRKLIDLTKIRVFVLDEADVMID 254

 Score = 38 (18.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query:    86 VNAIKPLPSCL 96
             VNA+K  P CL
Sbjct:   161 VNALKLFPQCL 171


>UNIPROTKB|F1NVJ6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
            EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
            Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
        Length = 642

 Score = 167 (63.8 bits), Expect = 4.6e-10, P = 4.6e-10
 Identities = 51/179 (28%), Positives = 93/179 (51%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIK-PLPSCLHHRFVICGKKMKY 109
             +RQTV  SA+ P   R L     + + ++ ++ V+V  +     + +  + ++  ++ K 
Sbjct:   417 DRQTVMMSATWPDGVRRL----AKSYLRNPMI-VYVGTLDLAAVNTVEQKVIVINEEEKK 471

Query:   110 QTLLSLIQSDAP-ESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEM 168
               + + I S  P +  IIFVG++S     A +     + V  L              E+ 
Sbjct:   472 AFMENFIDSMKPKDKAIIFVGKKSTADDIASDLGVQGVPVQSLHGD----------REQC 521

Query:   169 NFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             +   R  +L + ++G   +LV+TD+A+RG+D+ + TH++NFD PR+  +Y+HR GRTGR
Sbjct:   522 D---REQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGR 577


>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
            symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
            RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
            Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
            OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
        Length = 709

 Score = 167 (63.8 bits), Expect = 5.4e-10, P = 5.4e-10
 Identities = 69/276 (25%), Positives = 121/276 (43%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCN-NRQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                    +RQT+  SA+
Sbjct:   373 GRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSAT 432

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L     +++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   433 FPKEIQILARDFLEEY-----IFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATG 487

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLE 179
              +S  ++FV     ++KK  +A     L DFL   Y+       +  + +   R  +L +
Sbjct:   488 KDSLTLVFV-----ETKKGADA-----LEDFL---YREGYACTSIHGDRSQRDREEALHQ 534

Query:   180 VRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR-------KPFSD 232
              R G   ++V+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR         F +
Sbjct:   535 FRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYN 594

Query:   233 EKWTVTSIITSEELFVLQRYENELKFKSEELTLQTQ 268
             +K    S IT + L +L   + E+    E L  + Q
Sbjct:   595 DK---NSNITKDLLDILVEAKQEVPSWLENLAYEHQ 627


>UNIPROTKB|Q4K4H4 [details] [associations]
            symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
            EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
            ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
            PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
        Length = 622

 Score = 161 (61.7 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
 Identities = 36/89 (40%), Positives = 53/89 (59%)

Query:   171 NSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPF 230
             N+R  +L + + G   +LV+TDIAARG+D+ +  H+ NF+LP    DY+HR GRTGR   
Sbjct:   286 NARTKALADFKAGEVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGR 345

Query:   231 SDEKWTVTSIITSEELFVLQRYENELKFK 259
             S E     S++  +E  +L+  E   K K
Sbjct:   346 SGE---AISLVAPDEEKLLKSIERMTKQK 371

 Score = 43 (20.2 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  L  +    L  V++LV+DE D
Sbjct:   138 GRLLDLAGQGSVDLSHVEILVLDEAD 163


>UNIPROTKB|Q3MSQ8 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
            ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
        Length = 724

 Score = 167 (63.8 bits), Expect = 5.5e-10, P = 5.5e-10
 Identities = 61/228 (26%), Positives = 102/228 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L  ++ LV+DE D + +                     RQT+  SA+
Sbjct:   422 GRLLDVIRKEKIGLTKLRYLVLDEADRMLDMGFREDIENLLKSSGMPSKEERQTLMFSAT 481

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P   + L   I     K D + V V  +    S +    +   +  K   L+ ++Q   
Sbjct:   482 FPSSIQSLAREI----LKPDYLFVVVGQVGGACSDVEQMVIEVDEFGKKDKLMEILQEIG 537

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFL-SNSYKGSSDVLLLEEEMNFNSRAASLLE 179
              E  ++FV     K+KK  +  +T L  + + S S  G  +    ++E     R  +L +
Sbjct:   538 SERTMVFV-----KTKKKADFIATFLCQEKVPSTSIHGDRE----QKE-----RETALRD 583

Query:   180 VRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              R G   ++V+T +AARG+D+   +++ NFD+P    +Y+HR GRTGR
Sbjct:   584 FRTGQCPVIVATSVAARGLDIENVSYVINFDIPDDIDEYVHRIGRTGR 631


>UNIPROTKB|F1MSI6 [details] [associations]
            symbol:DDX25 "ATP-dependent RNA helicase DDX25"
            species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
            evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
            [GO:0006417 "regulation of translation" evidence=IEA] [GO:0006406
            "mRNA export from nucleus" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
            GO:GO:0007286 GO:GO:0003676 GO:GO:0006406 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
            IPI:IPI00724449 OMA:WHFAERI EMBL:DAAA02063102
            Ensembl:ENSBTAT00000005587 Uniprot:F1MSI6
        Length = 483

 Score = 161 (61.7 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
 Identities = 51/171 (29%), Positives = 89/171 (52%)

Query:   100 FVICG-KKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGS 158
             +V+CG +K KYQ L ++         IIF   Q+ ++ K        L V+ + + ++  
Sbjct:   316 YVLCGNRKDKYQALCNIYGGITIGQAIIFC--QTRRNAK-------WLTVEMMQDGHQ-- 364

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAID- 217
               V LL  E+  + RA+ +   R G   +L++T++ ARGID+ + T + NFDLP +  + 
Sbjct:   365 --VSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQAEE 422

Query:   218 -----YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
                  YLHR GRTGR  F  +K    ++I  ++L +L + ++      ++L
Sbjct:   423 PDYETYLHRIGRTGR--FG-KKGLAFNMIEVDKLPLLMKIQDHFSENIKQL 470

 Score = 39 (18.8 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
 Identities = 6/23 (26%), Positives = 14/23 (60%)

Query:     9 EKHIFKLESVQVLVIDEVDFLFN 31
             ++ +  L  ++V V+DE D + +
Sbjct:   232 KRKLIDLTKIRVFVLDEADVMID 254

 Score = 38 (18.4 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query:    86 VNAIKPLPSCL 96
             VNA+K  P CL
Sbjct:   161 VNALKLFPQCL 171


>UNIPROTKB|E1BII7 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
            EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
            Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
        Length = 647

 Score = 166 (63.5 bits), Expect = 6.2e-10, P = 6.2e-10
 Identities = 51/179 (28%), Positives = 90/179 (50%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLP-SCLHHRFVICGKKMKY 109
             +RQTV  SA+ P   R L     Q + K  ++ V+V  +  +  S +    ++  +  K 
Sbjct:   419 DRQTVMTSATWPYAVRRL----AQSYLKEPMI-VYVGTLDLVAVSTVTQNIIVTTEDEKR 473

Query:   110 QTLLSLIQSDAPESG-IIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEM 168
               + + I S +P+   IIFV  ++     + +     + V+ L  + +  SD        
Sbjct:   474 SHIQAFIDSMSPKDKVIIFVSRKAVADHLSSDLGIRRISVESLHGN-REQSD-------- 524

Query:   169 NFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
                 R  +L   + G   +L++TD+A+RG+D+ + TH+YN+D PR+  +Y+HR GRTGR
Sbjct:   525 ----RERALKSFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGR 579


>SGD|S000002428 [details] [associations]
            symbol:FAL1 "Nucleolar protein required for maturation of 18S
            rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
            EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
            OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
            RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
            SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
            STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
            GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
            CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
            Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
            Uniprot:Q12099
        Length = 399

 Score = 144 (55.7 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
 Identities = 39/118 (33%), Positives = 61/118 (51%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+LS     S+  V+ +  +M    R   + + R G   +L+STD+ ARGID+ 
Sbjct:   273 NTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQ 332

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFK 259
             + + + N+DLP    +Y+HR GR+GR  F   K    + IT  +L  L+  E     K
Sbjct:   333 QVSLVINYDLPEIIENYIHRIGRSGR--FG-RKGVAINFITKADLAKLREIEKFYSIK 387

 Score = 58 (25.5 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
 Identities = 11/30 (36%), Positives = 20/30 (66%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I+K + +  +VQ+LV+DE D L +
Sbjct:   151 GRVLDMIKKQMLQTRNVQMLVLDEADELLS 180


>UNIPROTKB|F1NTS2 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=IEA] [GO:0035145 "exon-exon junction complex"
            evidence=IEA] [GO:0045727 "positive regulation of translation"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
            GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
            EMBL:AADN02041230 ProteinModelPortal:F1NTS2
            Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
            Uniprot:F1NTS2
        Length = 414

 Score = 153 (58.9 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
 Identities = 35/124 (28%), Positives = 68/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+   + ++  V  +  +M    R + + E R G   +L+STD+ ARG+D+P
Sbjct:   288 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 347

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + I N+DLP +   Y+HR GR+GR      K    + + ++++ +L+  E     + +
Sbjct:   348 QVSLIINYDLPNNRELYIHRIGRSGRY---GRKGVAINFVKNDDIRILRDIEQYYSTQID 404

Query:   262 ELTL 265
             E+ +
Sbjct:   405 EMPM 408

 Score = 47 (21.6 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
 Identities = 8/28 (28%), Positives = 17/28 (60%)

Query:     4 LCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             L  +I +   +  ++++LV+DE D + N
Sbjct:   170 LLYMIRRRSLRTRAIKMLVLDEADEMLN 197


>FB|FBgn0037549 [details] [associations]
            symbol:CG7878 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
            GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
            UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
            GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
            FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
            GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
        Length = 703

 Score = 166 (63.5 bits), Expect = 7.0e-10, P = 7.0e-10
 Identities = 54/198 (27%), Positives = 101/198 (51%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFV-ICGKKM-K 108
             +RQT+  SA+ P   R L     Q + K+ +  V V ++    +    + + +    M K
Sbjct:   461 DRQTIMTSATWPPGVRRL----AQSYMKNPI-QVCVGSLDLAATHSVKQIIKLMEDDMDK 515

Query:   109 YQTLLSLIQS-DAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEE 167
             + T+ S +++  + +  IIF G    +  +A +  S   L  F++    G+ D      +
Sbjct:   516 FNTITSFVKNMSSTDKIIIFCG----RKVRADDLSSELTLDGFMTQCIHGNRD------Q 565

Query:   168 MNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             M+   R  ++ +++ G   +LV+TD+A+RG+D+ + TH+ N+D P +  +Y+HR GRTGR
Sbjct:   566 MD---REQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGR 622

Query:   228 KPFSDEKWTVTSIITSEE 245
                +  + T  S  T E+
Sbjct:   623 ---AGRQGTSISFFTRED 637


>UNIPROTKB|Q48PB7 [details] [associations]
            symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
            putative" species:264730 "Pseudomonas syringae pv. phaseolicola
            1448A" [GO:0006139 "nucleobase-containing compound metabolic
            process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
            KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
            ProtClustDB:CLSK865855 Uniprot:Q48PB7
        Length = 625

 Score = 160 (61.4 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
 Identities = 35/89 (39%), Positives = 53/89 (59%)

Query:   171 NSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPF 230
             N+R  +L + + G   ++V+TDIAARG+D+ +  H+ NF+LP    DY+HR GRTGR   
Sbjct:   286 NARTKALADFKAGDVRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGR 345

Query:   231 SDEKWTVTSIITSEELFVLQRYENELKFK 259
             S E     S++  +E  +L+  E   K K
Sbjct:   346 SGE---AISLVAPDEEKLLKSIERMTKQK 371

 Score = 43 (20.2 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  L  +    L  V++LV+DE D
Sbjct:   138 GRLLDLAGQGSVDLSHVEILVLDEAD 163


>UNIPROTKB|J9NSS1 [details] [associations]
            symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GeneTree:ENSGT00530000063236 CTD:29118 EMBL:AAEX03003382
            RefSeq:XP_536532.3 Ensembl:ENSCAFT00000048680 GeneID:479396
            KEGG:cfa:479396 Uniprot:J9NSS1
        Length = 369

 Score = 157 (60.3 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
 Identities = 51/177 (28%), Positives = 90/177 (50%)

Query:    94 SCLHHRFVIC-GKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLS 152
             S +   +V+C  +K KYQ L ++         IIF   Q+ ++ K        L V+ + 
Sbjct:   196 SNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFC--QTRRNAK-------WLTVEMMQ 246

Query:   153 NSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLP 212
             + ++    V LL  E+  + RA+ +   R G   +L++T++ ARGID+ + T + NFDLP
Sbjct:   247 DGHQ----VSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLP 302

Query:   213 RSAID------YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
              +  +      YLHR GRTGR  F  +K    ++I  ++L +L + ++      ++L
Sbjct:   303 VNQAEEPDYETYLHRIGRTGR--FG-KKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 356

 Score = 39 (18.8 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
 Identities = 6/23 (26%), Positives = 14/23 (60%)

Query:     9 EKHIFKLESVQVLVIDEVDFLFN 31
             ++ +  L  ++V V+DE D + +
Sbjct:   118 KRKLIDLTKIRVFVLDEADVMID 140


>ASPGD|ASPL0000013201 [details] [associations]
            symbol:AN4233 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
            RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
            STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
            KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
        Length = 465

 Score = 163 (62.4 bits), Expect = 8.9e-10, P = 8.9e-10
 Identities = 53/193 (27%), Positives = 91/193 (47%)

Query:    74 QKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSE 133
             Q+ + S+ V V V++     S L   ++    K K   L+ L+   A +S IIF     E
Sbjct:   238 QRASLSNPVRVSVSSKYQTVSTLQSSYICIPHKHKNLYLVYLLNEFAGQSAIIFTTTVHE 297

Query:   134 KSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDI 193
               + A           F+  +       + L  +++ ++R  +L + R     +LV+TD+
Sbjct:   298 TQRVA-----------FMLRAL--GFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDV 344

Query:   194 AARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYE 253
             AARG+D+P    ++NFDLP  +  Y+HR GRT R   + +     S +T  ++ V  R E
Sbjct:   345 AARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTAR---AGKSGVAISFVTQYDVEVWLRIE 401

Query:   254 NELKFKSEELTLQ 266
             + L  K  E  ++
Sbjct:   402 HALSKKLPEYQVE 414


>CGD|CAL0005460 [details] [associations]
            symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
            precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
            ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
            "RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
            EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
            ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
            GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
            Uniprot:Q5APT8
        Length = 564

 Score = 164 (62.8 bits), Expect = 9.1e-10, P = 9.1e-10
 Identities = 66/250 (26%), Positives = 107/250 (42%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  LI      L  V  LV+DE D +                    + RQT+  +A+ 
Sbjct:   281 GRLVDLINDGAINLGKVNYLVLDEADRMLEKGFEEDIKTIISNTSN--SERQTLMFTATW 338

Query:    62 PQHRRFLHNCIQQKWTKSDVV-HVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQS-D 119
             P+  R L N       K  V     ++A K +   +     +  K  K + L+ L++  +
Sbjct:   339 PKEVRELANNFMNSPVKVTVGDRDELSANKRITQVVE----VINKFDKEKKLIQLLRKYN 394

Query:   120 APESG----IIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAA 175
             A ES     +IF   + E S+          + +FL    +    V  +  +++   R A
Sbjct:   395 ANESSDNKILIFALYKKEASR----------IENFLK---RNRFSVAAIHGDLSQQQRTA 441

Query:   176 SLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKW 235
             +L   + G   LL++TD+AARG+D+P    + N   P +  DY+HR GRTGR   +  K 
Sbjct:   442 ALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTFPLTIEDYVHRIGRTGR---AGAKG 498

Query:   236 TVTSIITSEE 245
             T  ++ T +E
Sbjct:   499 TAHTLFTEDE 508


>UNIPROTKB|E1BSE5 [details] [associations]
            symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
            EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
            ArrayExpress:E1BSE5 Uniprot:E1BSE5
        Length = 402

 Score = 153 (58.9 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
 Identities = 35/124 (28%), Positives = 68/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+   + ++  V  +  +M    R + + E R G   +L+STD+ ARG+D+P
Sbjct:   281 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 340

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + I N+DLP +   Y+HR GR+GR      K    + + ++++ +L+  E     + +
Sbjct:   341 QVSLIINYDLPNNRELYIHRIGRSGRY---GRKGVAINFVKNDDIRILRDIEQYYSTQID 397

Query:   262 ELTL 265
             E+ +
Sbjct:   398 EMPM 401

 Score = 45 (20.9 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
 Identities = 7/25 (28%), Positives = 16/25 (64%)

Query:     7 LIEKHIFKLESVQVLVIDEVDFLFN 31
             +I +   +  ++++LV+DE D + N
Sbjct:   166 MIRRRSLRTRAIKMLVLDEADEMLN 190


>TAIR|locus:2041549 [details] [associations]
            symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
            EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
            UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
            PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
            KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
            OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
            GermOnline:AT2G42520 Uniprot:Q84W89
        Length = 633

 Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 59/231 (25%), Positives = 103/231 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  L+E+    ++ ++ L +DE D + +                     RQT+  SA+
Sbjct:   296 GRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSAT 355

Query:    61 IPQH-RRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHR--FVICGKKMKYQTLLSLIQ 117
              P+  +R   + +      ++ + + V  +      +  R  FV+   K  +  L+ L+ 
Sbjct:   356 FPREIQRLAADFL------ANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSH--LMDLLH 407

Query:   118 SDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLS-NSYKGSSDVLLLEEEMNFNSRAAS 176
             +   E+GI   G+Q+              L ++L  N +  +S    +  +     R  +
Sbjct:   408 AQR-ENGI--QGKQALTLVFVETKRGADSLENWLCINGFPATS----IHGDRTQQEREVA 460

Query:   177 LLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             L   + G   +LV+TD+AARG+D+P   H+ NFDLP    DY+HR GRTGR
Sbjct:   461 LKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 511


>WB|WBGene00018007 [details] [associations]
            symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0009790 "embryo development"
            evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
            "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0018996 "molting
            cycle, collagen and cuticulin-based cuticle" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
            GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
            EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
            ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
            MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
            EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
            KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
            WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
        Length = 399

 Score = 150 (57.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
 Identities = 36/124 (29%), Positives = 68/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L++  K ++  V  +  +M    R   + E R G   +L+STD+ ARG+D+P
Sbjct:   273 NTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVP 332

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +   Y+HR GR+GR  F   K    + +  +++ +L+  E     + +
Sbjct:   333 QVSLVINYDLPNNRELYIHRIGRSGR--FG-RKGVAINFVKQDDVRILRDIEQYYSTQID 389

Query:   262 ELTL 265
             E+ +
Sbjct:   390 EMPM 393

 Score = 48 (22.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I +   +  ++++LV+DE D + N
Sbjct:   153 GRVFDMIRRRNLRTRAIKLLVLDEADEMLN 182


>WB|WBGene00022029 [details] [associations]
            symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0018996 "molting cycle, collagen and
            cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0042127 "regulation of cell proliferation" evidence=IMP]
            [GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
            cell development" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
            GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
            GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
            RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
            STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
            KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
            InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
        Length = 399

 Score = 150 (57.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
 Identities = 36/124 (29%), Positives = 68/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L++  K ++  V  +  +M    R   + E R G   +L+STD+ ARG+D+P
Sbjct:   273 NTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVP 332

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +   Y+HR GR+GR  F   K    + +  +++ +L+  E     + +
Sbjct:   333 QVSLVINYDLPNNRELYIHRIGRSGR--FG-RKGVAINFVKQDDVRILRDIEQYYSTQID 389

Query:   262 ELTL 265
             E+ +
Sbjct:   390 EMPM 393

 Score = 48 (22.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I +   +  ++++LV+DE D + N
Sbjct:   153 GRVFDMIRRRNLRTRAIKLLVLDEADEMLN 182


>DICTYBASE|DDB_G0287361 [details] [associations]
            symbol:ddx41 "DEAD box protein abstrakt"
            species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
            GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
            GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
            EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
            IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
            KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
        Length = 671

 Score = 156 (60.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:   171 NSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPF 230
             + R +++   R+G   +LV+TD+A++G+D PE  H+ NFD+PR   +Y+HR GRTGR+  
Sbjct:   511 DERESAIKAFREGKKDVLVATDVASKGLDFPEIQHVINFDMPREIENYIHRIGRTGRRGN 570

Query:   231 SDEKWTVTSIITSEELFVLQRY 252
                  T  +   +E L +  +Y
Sbjct:   571 KGVATTFINKNNTESLLLDLKY 592

 Score = 47 (21.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
 Identities = 16/62 (25%), Positives = 25/62 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L+ K     +  + L +DE D L +                  N RQT+  SA++
Sbjct:   364 GRLLDLLNKKKINFKLCKYLGLDEADRLIDLGFEDDIRSVLDNFT---NQRQTLLFSATM 420

Query:    62 PQ 63
             P+
Sbjct:   421 PK 422


>ASPGD|ASPL0000037981 [details] [associations]
            symbol:AN2932 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
            PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
            Uniprot:Q5B948
        Length = 398

 Score = 148 (57.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
 Identities = 35/124 (28%), Positives = 66/124 (53%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L++        V  +  +M    R   + E R G   +L++TD+ ARGID+ 
Sbjct:   272 NTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQ 331

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T++++ +++  E     + E
Sbjct:   332 QVSLVINYDLPANRENYIHRIGRGGR--FG-RKGVAINFVTADDVRMMREIEQFYSTQIE 388

Query:   262 ELTL 265
             E+ +
Sbjct:   389 EMPM 392

 Score = 50 (22.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
 Identities = 12/62 (19%), Positives = 28/62 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  +I++ + K + +++ ++DE D + +                   + Q V  SA++
Sbjct:   152 GRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLP---QSTQVVLLSATM 208

Query:    62 PQ 63
             PQ
Sbjct:   209 PQ 210


>TAIR|locus:2020078 [details] [associations]
            symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
            "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
            [GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
            salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
            GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
            EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
            EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
            UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
            PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
            GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
            InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
            ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
            Uniprot:P41377
        Length = 412

 Score = 159 (61.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
 Identities = 39/116 (33%), Positives = 65/116 (56%)

Query:   143 STTLLVDFLSNSYKGSSD-VLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L++  +     V     +M+ N+R   + E R G   +L++TD+ ARGID+ 
Sbjct:   286 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 345

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEE---LFVLQRYEN 254
             + + + NFDLP    +YLHR GR+GR  F   K    + +T ++   LF +Q++ N
Sbjct:   346 QVSLVINFDLPTQPENYLHRIGRSGR--FG-RKGVAINFVTLDDQRMLFDIQKFYN 398

 Score = 36 (17.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
 Identities = 5/26 (19%), Positives = 15/26 (57%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +  ++ +   + + +++ V+DE D
Sbjct:   166 GRVFDMLRRQSLRPDCIKMFVLDEAD 191


>RGD|1311976 [details] [associations]
            symbol:Ddx28 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 28"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
            evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
            "mitochondrion" evidence=ISO] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
            evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1311976
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0042645
            EMBL:CH473972 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:55794
            OMA:RARRDHF OrthoDB:EOG42RD7H GeneTree:ENSGT00670000098028
            IPI:IPI00870370 RefSeq:NP_001102368.1 UniGene:Rn.140812
            Ensembl:ENSRNOT00000026817 GeneID:364995 KEGG:rno:364995
            UCSC:RGD:1311976 NextBio:686447 Uniprot:D4A7Q5
        Length = 540

 Score = 152 (58.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
 Identities = 39/115 (33%), Positives = 64/115 (55%)

Query:   140 NAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGID 199
             N+ ST   + ++ + +K     L L+ +M  + RA      ++G   +LV TDIA+RG+D
Sbjct:   405 NSASTVNWLGYILDDHKIQH--LRLQGQMPASMRAGIFQSFQKGSQNILVCTDIASRGLD 462

Query:   200 LPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSE-ELFVLQRYE 253
                   + N+D P +  DY+HRAGR GR   S+   TVTS +T   ++ ++Q+ E
Sbjct:   463 SIHVEMVVNYDFPPTLQDYIHRAGRVGRVG-SEVPGTVTSFVTHPWDVSLVQKIE 516

 Score = 49 (22.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G+L + ++  +  L  +  +V+DEVD L +
Sbjct:   264 GALWKALKSQLISLHHLNFIVLDEVDTLLD 293


>TIGR_CMR|CPS_1726 [details] [associations]
            symbol:CPS_1726 "RNA helicase DeaD" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
            STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
            OMA:WIVKGVE ProtClustDB:CLSK741103
            BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
        Length = 611

 Score = 149 (57.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
 Identities = 32/106 (30%), Positives = 56/106 (52%)

Query:   148 VDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIY 207
             VD      +     L L  ++N   R   + +++ G   +LV+TD+ ARG+D+P  + + 
Sbjct:   268 VDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSILVATDVVARGLDIPRISLVI 327

Query:   208 NFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYE 253
             N+DLP     Y+HR GRTGR     E  ++ + +   E++ ++ YE
Sbjct:   328 NYDLPGDNEAYVHRIGRTGRA--GREGMSI-AFVRPREMYSIRHYE 370

 Score = 54 (24.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
 Identities = 30/135 (22%), Positives = 57/135 (42%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L   + +   KL+ ++V V+DE D + N                     Q    SA++
Sbjct:   143 GRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTA---QMCLFSATM 199

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCL-HHRFVICG--KKMKYQTLLSLIQS 118
             P   R + N    ++ K D  H+ V A+K   + +  + + + G  K    + +  +++ 
Sbjct:   200 PPAIRKIAN----RFLK-DPEHIKVAAVKKAKANITQYAWKVSGITKMTALERIAEVVEY 254

Query:   119 DAPESGIIFVGEQSE 133
             DA    IIFV  +++
Sbjct:   255 DAM---IIFVRTRND 266


>TAIR|locus:2035741 [details] [associations]
            symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
            IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
            UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
            PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
            KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
            OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
            Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
        Length = 501

 Score = 136 (52.9 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
 Identities = 24/51 (47%), Positives = 35/51 (68%)

Query:   177 LLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             L E R G   ++ +TD+AARG+D+ +  ++ N+D P S  DY+HR GRTGR
Sbjct:   387 LSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGR 437

 Score = 50 (22.7 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
 Identities = 14/37 (37%), Positives = 22/37 (59%)

Query:   147 LVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQG 183
             +VD +S S K +  V LLE+ M+  SR    L+ ++G
Sbjct:   321 IVDVISESQKYNKLVKLLEDIMD-GSRILVFLDTKKG 356

 Score = 50 (22.7 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
 Identities = 19/74 (25%), Positives = 33/74 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  ++E +   L  V  LV+DE D + +                   +RQT++ SA+ 
Sbjct:   231 GRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRP---DRQTLYWSATW 287

Query:    62 PQH-----RRFLHN 70
             P+      ++FL+N
Sbjct:   288 PKEVEQLSKKFLYN 301


>WB|WBGene00013214 [details] [associations]
            symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
            HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
            SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
            GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
            WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
            Uniprot:Q9XVZ6
        Length = 504

 Score = 161 (61.7 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 68/235 (28%), Positives = 103/235 (43%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L    +  L SV  +V+DE D + +                   +R     SA+ 
Sbjct:   221 GRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRP---DRLVALTSATW 277

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSC--LHHRFVICGKKMKYQTLLSLIQSD 119
             P+  R L +    K+TK  V+ V  N    L SC  +   F       ++  +  ++   
Sbjct:   278 PEGVRKLTD----KYTKEAVMAV--NGSLDLTSCKSVTQFFEFVPHDSRFLRVCEIVNFL 331

Query:   120 APESG-----IIFVGEQSEKSKKAGNAPSTTLLVDFLSNSY--KGSSDVLLLEEEMNFNS 172
                 G     IIFV     KSK         ++ D LS+ +  KG +   L     + + 
Sbjct:   332 TAAHGQNYKMIIFV-----KSK---------VMADHLSSDFCMKGINSQGL-HGGRSQSD 376

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R  SL  +R G   +LV+TD+A+RGID+P+ TH+ N+D P    +Y+HR GRTGR
Sbjct:   377 REMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGR 431


>SGD|S000003046 [details] [associations]
            symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
            family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
            subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
            "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
            EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
            ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
            MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
            EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
            KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
            KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
            GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
        Length = 523

 Score = 161 (61.7 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 64/251 (25%), Positives = 107/251 (42%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L+++    L  V  LV+DE D +                    + RQT+  +A+ 
Sbjct:   240 GRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDA--SKRQTLMFTATW 297

Query:    62 PQHRR-----FLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLI 116
             P+  R     F++N I+     +D +  +   I  +   +  R    GK+ K   LL   
Sbjct:   298 PKEVRELASTFMNNPIKVSIGNTDQLTAN-KRITQIVEVVDPR----GKERKLLELLKKY 352

Query:   117 QSDAP--ESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRA 174
              S     E  +IF   + E ++   N              Y G + V  +  +++   R 
Sbjct:   353 HSGPKKNEKVLIFALYKKEAARVERNL------------KYNGYN-VAAIHGDLSQQQRT 399

Query:   175 ASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEK 234
              +L E + G   LL++TD+AARG+D+P    + N   P +  DY+HR GRTGR   + + 
Sbjct:   400 QALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGR---AGQT 456

Query:   235 WTVTSIITSEE 245
              T  ++ T +E
Sbjct:   457 GTAHTLFTEQE 467


>TAIR|locus:2076351 [details] [associations]
            symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
            GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
            EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
            IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
            RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
            UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
            STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
            EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
            KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
            OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
            Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
        Length = 612

 Score = 161 (61.7 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 59/233 (25%), Positives = 100/233 (42%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  L+E+    ++ ++ L +DE D + +                     RQT+  SA+
Sbjct:   288 GRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSAT 347

Query:    61 IP-QHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQS- 118
              P Q +R   + +      S+ + + V  +      +  R     +  K   L+ L+ + 
Sbjct:   348 FPSQIQRLAADFM------SNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQ 401

Query:   119 ----DAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRA 174
                 D     ++FV    E  + A    +   + +F + S  G       ++E     R 
Sbjct:   402 RETQDKQSLTLVFV----ETKRGADTLENWLCMNEFPATSIHGDRT----QQE-----RE 448

Query:   175 ASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              +L   + G   +LV+TD+AARG+D+P   H+ NFDLP    DY+HR GRTGR
Sbjct:   449 VALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 501


>UNIPROTKB|A4QVP2 [details] [associations]
            symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
            RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
            EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
            Uniprot:A4QVP2
        Length = 396

 Score = 148 (57.2 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
 Identities = 35/124 (28%), Positives = 67/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L++        V  +  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   270 NTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQ 329

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T++++ +++  E     + E
Sbjct:   330 QVSLVINYDLPANRENYIHRIGRGGR--FG-RKGVAINFVTADDVRMMREIEQFYSTQIE 386

Query:   262 ELTL 265
             E+ +
Sbjct:   387 EMPM 390

 Score = 47 (21.6 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
 Identities = 13/62 (20%), Positives = 27/62 (43%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  +I++   K + +++ V+DE D + +                   + Q V  SA++
Sbjct:   150 GRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLP---QSTQVVLLSATM 206

Query:    62 PQ 63
             PQ
Sbjct:   207 PQ 208


>TAIR|locus:2076436 [details] [associations]
            symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
            EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
            RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
            SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
            EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
            GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
            ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
            Uniprot:Q9M2F9
        Length = 646

 Score = 161 (61.7 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 59/233 (25%), Positives = 103/233 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  L+E+    L+ V+ L +DE D + +                     RQT+  SA+
Sbjct:   283 GRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSAT 342

Query:    61 IPQH-RRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSD 119
              P+  +R   + +      S+ + + V  +      +  R        K   L+ L+ + 
Sbjct:   343 FPREIQRLASDFL------SNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQ 396

Query:   120 APESGIIFVGEQS-----EKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRA 174
               E+G    G+Q+      ++KK  ++    L +    N +  ++    +  + +   R 
Sbjct:   397 R-ENGN--QGKQALTLVFVETKKGADSLENWLCI----NGFPATT----IHGDRSQQERE 445

Query:   175 ASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              +L   + G   +LV+TD+AARG+D+P   H+ NFDLP    DY+HR GRTGR
Sbjct:   446 VALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 498


>UNIPROTKB|F1NQ09 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
            IPI:IPI00819782 ProteinModelPortal:F1NQ09
            Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
        Length = 451

 Score = 151 (58.2 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 26/55 (47%), Positives = 42/55 (76%)

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R  +L + ++G   +LV+TD+A+RG+D+ + TH++NFD PR+  +Y+HR GRTGR
Sbjct:   336 REQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGR 390

 Score = 45 (20.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 19/67 (28%), Positives = 27/67 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L   +   L+S+  LV+DE D + +                   +RQTV  SA+ 
Sbjct:   185 GRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRP---DRQTVMMSATW 241

Query:    62 PQHRRFL 68
             P   R L
Sbjct:   242 PDGVRRL 248


>UNIPROTKB|Q48AV0 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 150 (57.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 41/125 (32%), Positives = 64/125 (51%)

Query:   149 DFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYN 208
             D      K     L +  + +  +R  +L E ++G    L++TD+AARGID+   +H+ N
Sbjct:   261 DLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVIN 320

Query:   209 FDLPRSAIDYLHRAGRTGRKPFSD---------EKWTVTSIITSEELFVLQRYENELKFK 259
             ++LP +A DY+HR GRT R   S          E+W +T+I   EEL  +Q  +  L   
Sbjct:   321 YELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAI---EELLDIQLLQQWLPGY 377

Query:   260 SEELT 264
               +LT
Sbjct:   378 ELDLT 382

 Score = 45 (20.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  L+      L +++ LV DE D
Sbjct:   135 GRLLDLLRTESVSLSNIETLVFDEAD 160


>TIGR_CMR|CPS_0042 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 150 (57.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 41/125 (32%), Positives = 64/125 (51%)

Query:   149 DFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYN 208
             D      K     L +  + +  +R  +L E ++G    L++TD+AARGID+   +H+ N
Sbjct:   261 DLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVIN 320

Query:   209 FDLPRSAIDYLHRAGRTGRKPFSD---------EKWTVTSIITSEELFVLQRYENELKFK 259
             ++LP +A DY+HR GRT R   S          E+W +T+I   EEL  +Q  +  L   
Sbjct:   321 YELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAI---EELLDIQLLQQWLPGY 377

Query:   260 SEELT 264
               +LT
Sbjct:   378 ELDLT 382

 Score = 45 (20.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  L+      L +++ LV DE D
Sbjct:   135 GRLLDLLRTESVSLSNIETLVFDEAD 160


>UNIPROTKB|B2C6E9 [details] [associations]
            symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
            [GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
        Length = 704

 Score = 161 (61.7 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 61/227 (26%), Positives = 99/227 (43%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  +I K    L  ++ LV+DE D + +                     RQT+  SA+
Sbjct:   402 GRLMDIIGKEKIGLGQIRYLVLDEADRMLDMGFGPEMKKLISFPGMPSKEQRQTLMFSAT 461

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P  R    +   +      +  V V  +    S +    +  G+  K + L+ ++++  
Sbjct:   462 FP--RGNFKDWAGEFLKNLTICLVAVGQVGGACSDVQQTVLQVGQYSKREKLVEILRNIG 519

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEV 180
              E  ++FV    E  KKA        +  FL    K S+  +  + E     R  +L + 
Sbjct:   520 EERTMVFV----ETKKKAD------FIATFLCQE-KISTTSIHGDREQR--EREQALGDF 566

Query:   181 RQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R G   +LV+T +AARG+D+    H+ NFDLP +  +Y+HR GRTGR
Sbjct:   567 RCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGR 613


>FB|FBgn0037573 [details] [associations]
            symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
            melanogaster" [GO:0016281 "eukaryotic translation initiation factor
            4F complex" evidence=ISS] [GO:0003743 "translation initiation
            factor activity" evidence=ISS] [GO:0006413 "translational
            initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
            oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
            DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
            GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
            EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
            STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
            InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
        Length = 399

 Score = 141 (54.7 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
 Identities = 35/122 (28%), Positives = 66/122 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+   + ++  V  +  +M    R   + E R G   +L++TD+ ARGID+ 
Sbjct:   273 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQ 332

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +   Y+HR GR+GR  F   K    + + S+++ +L+  E     + +
Sbjct:   333 QVSLVINYDLPNNRELYIHRIGRSGR--FG-RKGVAINFVKSDDIRILRDIEQYYSTQID 389

Query:   262 EL 263
             E+
Sbjct:   390 EM 391

 Score = 55 (24.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
 Identities = 8/30 (26%), Positives = 20/30 (66%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I++ + +  ++++LV+DE D + N
Sbjct:   153 GRVFDMIKRRVLRTRAIKMLVLDEADEMLN 182


>CGD|CAL0003204 [details] [associations]
            symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
            EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
            ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
            GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
            Uniprot:Q59LU0
        Length = 562

 Score = 155 (59.6 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query:   132 SEKSKKAGNAPSTTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVS 190
             +EK  K     ST    D ++   +      L +  +   N R   L E R+G   ++V+
Sbjct:   371 NEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVA 430

Query:   191 TDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             TD+AARGID+   TH+ N+D+P +  DY+HR GRTGR
Sbjct:   431 TDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGR 467

 Score = 42 (19.8 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  ++E     L+ V  LV+DE D
Sbjct:   259 GRLIDMLEAGKTNLKRVTYLVLDEAD 284


>UNIPROTKB|E9PR46 [details] [associations]
            symbol:DDX25 "ATP-dependent RNA helicase DDX25"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
            ChiTaRS:DDX25 IPI:IPI00984425 Ensembl:ENST00000526875
            ArrayExpress:E9PR46 Bgee:E9PR46 Uniprot:E9PR46
        Length = 407

 Score = 155 (59.6 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
 Identities = 52/174 (29%), Positives = 87/174 (50%)

Query:   100 FVICG-KKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGS 158
             +V+C  +K KYQ L ++  S      IIF   Q+ ++ K        L V+ + + ++  
Sbjct:   240 YVLCEHRKDKYQALCNIYGSITIGQAIIFC--QTRRNAK-------WLTVEMIQDGHQ-- 288

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAID- 217
               V LL  E+    RA+ +   R G   +L++T++ ARGID+ + T + NFDLP    + 
Sbjct:   289 --VSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEE 346

Query:   218 -----YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTLQ 266
                  YLHR GRTGR  F  +K    ++I  +EL  L + ++      ++L  +
Sbjct:   347 PDYETYLHRIGRTGR--FG-KKGLAFNMIEVDELPSLMKIQDHFNSSIKQLNAE 397

 Score = 37 (18.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query:    12 IFKLESVQVLVIDEVDFLFN 31
             +  L  ++V V+DE D + +
Sbjct:   159 LIDLTKIRVFVLDEADVMID 178


>FB|FBgn0263231 [details] [associations]
            symbol:bel "belle" species:7227 "Drosophila melanogaster"
            [GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
            "spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
            development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
            [GO:0016442 "RNA-induced silencing complex" evidence=IDA]
            [GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
            particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
            GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
            GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
            RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
            SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
            EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
            UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
            OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
            NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
        Length = 798

 Score = 161 (61.7 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 64/234 (27%), Positives = 104/234 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXX-CNNRQTVFASAS 60
             G L  +I +    LE+++ LV+DE D + +                     RQT+  SA+
Sbjct:   437 GRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSAT 496

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQS-- 118
              P+  + L +        S+ + + V  +      +    +   +  K   LL L+ S  
Sbjct:   497 FPKQIQELASDFL-----SNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSSIR 551

Query:   119 DAPESG-----IIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSR 173
             D PE       +IFV     ++KK  ++     L +FL   Y+ +  V  +  +     R
Sbjct:   552 DGPEYTKDSLTLIFV-----ETKKGADS-----LEEFL---YQCNHPVTSIHGDRTQKER 598

Query:   174 AASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
               +L   R G   +LV+T +AARG+D+P   H+ NFDLP    +Y+HR GRTGR
Sbjct:   599 EEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGR 652


>TAIR|locus:2010306 [details] [associations]
            symbol:EMB1586 "embryo defective 1586" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=NAS] [GO:0009663 "plasmodesma organization"
            evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=ISS]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010497
            "plasmodesmata-mediated intercellular transport" evidence=IMP]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0003723
            EMBL:AC012187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0010497 EMBL:AC025417 EMBL:AY062618 EMBL:AY114691
            EMBL:AK175587 EMBL:AK175711 EMBL:AK175751 EMBL:AK175793
            EMBL:AK176044 EMBL:AK176194 EMBL:AK226229 EMBL:AK229878
            EMBL:AK230085 IPI:IPI00521991 PIR:H86260 RefSeq:NP_172737.2
            UniGene:At.47876 ProteinModelPortal:Q8W4E1 SMR:Q8W4E1 PaxDb:Q8W4E1
            PRIDE:Q8W4E1 EnsemblPlants:AT1G12770.1 GeneID:837833
            KEGG:ath:AT1G12770 GeneFarm:1026 TAIR:At1g12770
            HOGENOM:HOG000239285 InParanoid:Q8W4E1 OMA:IRVSNFV PhylomeDB:Q8W4E1
            ProtClustDB:CLSN2681499 Genevestigator:Q8W4E1 GO:GO:0009663
            Uniprot:Q8W4E1
        Length = 551

 Score = 148 (57.2 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query:    89 IKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLV 148
             I+ LP  L H + I   + K  TL   + +   +S I F+    +         +  +  
Sbjct:   375 IQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQSVIAFMNHSRQLKDVVYKLEARGM-- 432

Query:   149 DFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYN 208
                 NS +   D+  L        R+  L + + G   +LV+ +++ARG+D+ E   + N
Sbjct:   433 ----NSAEMHGDLGKL-------GRSTVLKKFKNGEIKVLVTNELSARGLDVAECDLVVN 481

Query:   209 FDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENEL 256
              +LP  A+ Y HRAGRTGR      K TV ++    ++F++++ E +L
Sbjct:   482 LELPTDAVHYAHRAGRTGRL---GRKGTVVTVCEESQVFIVKKMEKQL 526

 Score = 50 (22.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPL 92
             NRQT+  SA++P    F      + W+   V+ V  N + PL
Sbjct:   312 NRQTILVSATVP----FSVIRAAKSWSHEPVL-VQANKVTPL 348


>DICTYBASE|DDB_G0281925 [details] [associations]
            symbol:DDB_G0281925 "DEAD/DEAH box helicase"
            species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
            EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
            ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
            GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
            Uniprot:Q54T87
        Length = 586

 Score = 159 (61.0 bits), Expect = 4.2e-09, P = 4.2e-09
 Identities = 74/268 (27%), Positives = 118/268 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L+ KH   L SVQ LV+DE D + +                    RQT+  SA+ 
Sbjct:   243 GRLNDLLRKH--HLSSVQYLVLDEADRMLDMGFMPQIESLIDQIP---KERQTLMFSATW 297

Query:    62 PQH-----RRFLHNCIQ-----QKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQT 111
             P+       +FL + I+     Q+ T S  V  H+  I  L S L    +I      Y  
Sbjct:   298 PKEVKLLASKFLKDPIKITVGSQELTGSINVTQHIVNIDDL-SDLQSDDLI------YDE 350

Query:   112 LLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFN 171
             +  ++ +D   + I+F  E+     K  +         +LS      S VL   ++    
Sbjct:   351 INKILTADPTNTVIVFCNEKY----KCDD------FQHYLSTQKNVKSIVLHSGKDQRM- 399

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
              R + L   R     +L++TD+AARG+D+P    ++N+ LP +  DY+HR GRTGR   +
Sbjct:   400 -RESGLKLFRDHRIRILIATDVAARGLDIPSVKAVFNYRLPGNIEDYVHRIGRTGRAGKT 458

Query:   232 DEKWTVTSIITSE--ELF-VLQRYENEL 256
              + W+  +  T    +L  +LQR   ++
Sbjct:   459 GDAWSYVTTQTPNLRDLVKILQRTNQKI 486


>FB|FBgn0003261 [details] [associations]
            symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
            evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
            chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
            GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
            GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
            EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
            RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
            RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
            RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
            ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
            MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
            EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
            CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
            OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
            Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
        Length = 719

 Score = 160 (61.4 bits), Expect = 4.3e-09, P = 4.3e-09
 Identities = 69/267 (25%), Positives = 120/267 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L   +      L+    LV+DE D + +                   +RQT+  SA+ 
Sbjct:   413 GRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRP---DRQTLMWSATW 469

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVIC---GKKMKYQTLLSLIQ- 117
             P+  + L       + + ++  + ++A   +   +     +C    K+ K +TLLS I  
Sbjct:   470 PKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVD----VCDEFSKEEKLKTLLSDIYD 525

Query:   118 -SDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAAS 176
              S++P   IIFV    E  ++  N      LV F+  S+      +    + + + R   
Sbjct:   526 TSESPGKIIIFV----ETKRRVDN------LVRFI-RSFGVRCGAI--HGDKSQSERDFV 572

Query:   177 LLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWT 236
             L E R G   +LV+TD+AARG+D+    ++ NFD P+++ DY+HR GRTGR   S+ K T
Sbjct:   573 LREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGR---SNTKGT 629

Query:   237 VTSIITSEELFVLQRYENELKFKSEEL 263
               +  T       +   + L+  ++E+
Sbjct:   630 SFAFFTKNNAKQAKALVDVLREANQEI 656


>FB|FBgn0032919 [details] [associations]
            symbol:CG9253 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
            PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
            OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
        Length = 507

 Score = 158 (60.7 bits), Expect = 4.3e-09, P = 4.3e-09
 Identities = 36/102 (35%), Positives = 61/102 (59%)

Query:   164 LEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAG 223
             L  +M+ N R A+L + +     +L+STD+A+RG+D+P    + NFD+P  + DY+HR G
Sbjct:   330 LHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVG 389

Query:   224 RTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTL 265
             RT R   S +  T   +++  ++ + QR E+ L    ++LTL
Sbjct:   390 RTARAGRSGKAIT---LVSQYDIELYQRIEHLL---GKQLTL 425


>ZFIN|ZDB-GENE-040426-915 [details] [associations]
            symbol:eif4a3 "eukaryotic translation initiation
            factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
            translation" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
            GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
            GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
            GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
            OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
            UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
            PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
            NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
        Length = 406

 Score = 145 (56.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
 Identities = 34/124 (27%), Positives = 67/124 (54%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+   + ++  V  +  +M    R + + E R G   +L+STD+ ARG+D+ 
Sbjct:   280 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVS 339

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + I N+DLP +   Y+HR GR+GR      K    + + ++++ +L+  E     + +
Sbjct:   340 QVSLIINYDLPNNRELYIHRIGRSGRY---GRKGVAINFVKNDDIRILRDIEQYYSTQID 396

Query:   262 ELTL 265
             E+ +
Sbjct:   397 EMPM 400

 Score = 49 (22.3 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
 Identities = 8/30 (26%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G +  +I +   +  ++++LV+DE D + N
Sbjct:   160 GRVFDMIRRRSLRTRAIKMLVLDEADEMLN 189


>UNIPROTKB|I3LHW0 [details] [associations]
            symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
            Uniprot:I3LHW0
        Length = 621

 Score = 159 (61.0 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 58/209 (27%), Positives = 105/209 (50%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLP-SCLHHRFVICGKKMKY 109
             +RQT+  SA+ P   R L +     + K  ++ V+V  +  +    +    +I  ++ K 
Sbjct:   393 DRQTIMTSATWPDTIRQLAH----SYLKEPML-VYVGTLDLVAVDTVKQNIIITTEEEKR 447

Query:   110 QTLLSLIQSDAPESGII-FVGEQSEKSKKAGNAPSTTLLVDFLSN--SYKGSSDVLLLEE 166
                   +QS +P+  +I FV      S+K        L+ D LS+  S +G   V  L  
Sbjct:   448 SLFQEFLQSLSPKDKVIVFV------SRK--------LIADDLSSDLSIQGIP-VQSLHG 492

Query:   167 EMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTG 226
             +   + R  +L + + G   +L++TD+A+RG+D+ + TH++N++ PR+  +Y+HR GRTG
Sbjct:   493 DREQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTG 552

Query:   227 RKPFSDEKWTVTSI----ITSEELFVLQR 251
             R     E  T+ +     +  E + +LQR
Sbjct:   553 RAGKMGESVTLMTQDDWKVAGELIEILQR 581


>TAIR|locus:2118509 [details] [associations]
            symbol:RH39 "RH39" species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=IMP;IDA]
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0070180 "LSU rRNA
            binding" evidence=IDA] [GO:0080158 "chloroplast ribulose
            bisphosphate carboxylase complex biogenesis" evidence=IMP]
            [GO:1901259 "chloroplast rRNA processing" evidence=IMP] [GO:0006364
            "rRNA processing" evidence=RCA] [GO:0006399 "tRNA metabolic
            process" evidence=RCA] [GO:0009658 "chloroplast organization"
            evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0016887 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:AL161515 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 OMA:RARRDHF EMBL:AL049482 GO:GO:0070180
            GO:GO:0080158 EMBL:BT010574 EMBL:AK175347 EMBL:AK175353
            EMBL:AK175435 EMBL:AK175766 EMBL:AK221801 IPI:IPI00543621
            PIR:T04020 RefSeq:NP_849348.1 UniGene:At.43433
            ProteinModelPortal:Q56X76 SMR:Q56X76 PaxDb:Q56X76 PRIDE:Q56X76
            EnsemblPlants:AT4G09730.1 GeneID:826559 KEGG:ath:AT4G09730
            KEGG:dosa:Os01t0184500-01 GeneFarm:1015 TAIR:At4g09730
            HOGENOM:HOG000264923 InParanoid:Q56X76 PhylomeDB:Q56X76
            ProtClustDB:CLSN2690824 Genevestigator:Q56X76 GermOnline:AT4G09730
            GO:GO:1901259 Uniprot:Q56X76
        Length = 621

 Score = 159 (61.0 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 65/271 (23%), Positives = 122/271 (45%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXX---XXXXXCNNR--QTVF 56
             G + Q IE+       +  LV+DE D +F+                     N++  QTV 
Sbjct:   248 GRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQRALKTNDQGFQTVL 307

Query:    57 ASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAI-KPLPSCLHHRFVICGKKMKYQTLLSL 115
              +A++      +   + +++    + H+  + + K + +  H    + G + K + LL +
Sbjct:   308 VTATMTMA---VQKLVDEEF--QGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEALLQV 362

Query:   116 IQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVD-FLSNSYKGSSDVLLLEEEMNFNSRA 174
             ++    +   + V   +  S +A         VD +LS +   + +      E+    R 
Sbjct:   363 LEPSLAKGSKVMVFCNTLNSSRA---------VDHYLSENQISTVNY---HGEVPAEQRV 410

Query:   175 ASLLEVR--QGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSD 232
              +L + +  +G    LV TD+AARG+DL +  H+  FD P+++IDYLHR GRT R     
Sbjct:   411 ENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARM---G 466

Query:   233 EKWTVTSIITSEELFVLQRYENELKFKSEEL 263
              K  VTS+++ ++  +  R E  ++  +E L
Sbjct:   467 AKGKVTSLVSRKDQMLAARIEEAMR-NNESL 496


>UNIPROTKB|F1SQ03 [details] [associations]
            symbol:LOC100524536 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
            ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
            GeneID:100524536 Uniprot:F1SQ03
        Length = 630

 Score = 159 (61.0 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 58/209 (27%), Positives = 105/209 (50%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLP-SCLHHRFVICGKKMKY 109
             +RQT+  SA+ P   R L +     + K  ++ V+V  +  +    +    +I  ++ K 
Sbjct:   402 DRQTIMTSATWPDTIRQLAH----SYLKEPML-VYVGTLDLVAVDTVKQNIIITTEEEKR 456

Query:   110 QTLLSLIQSDAPESGII-FVGEQSEKSKKAGNAPSTTLLVDFLSN--SYKGSSDVLLLEE 166
                   +QS +P+  +I FV      S+K        L+ D LS+  S +G   V  L  
Sbjct:   457 SLFQEFLQSLSPKDKVIVFV------SRK--------LIADDLSSDLSIQGIP-VQSLHG 501

Query:   167 EMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTG 226
             +   + R  +L + + G   +L++TD+A+RG+D+ + TH++N++ PR+  +Y+HR GRTG
Sbjct:   502 DREQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTG 561

Query:   227 RKPFSDEKWTVTSI----ITSEELFVLQR 251
             R     E  T+ +     +  E + +LQR
Sbjct:   562 RAGKMGESVTLMTQDDWKVAGELIEILQR 590


>UNIPROTKB|Q4K8U0 [details] [associations]
            symbol:deaD "Cold-shock DEAD box protein A" species:220664
            "Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
            evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
            GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
            OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
            GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
            ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
            Uniprot:Q4K8U0
        Length = 557

 Score = 158 (60.7 bits), Expect = 5.1e-09, P = 5.1e-09
 Identities = 51/187 (27%), Positives = 91/187 (48%)

Query:    80 DVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAG 139
             D  HV + +     + +    ++     K   +LSL++ +  ++ I+FV     ++K+A 
Sbjct:   204 DPKHVKIQSKTQTVTAIEQAHLLVHADQKTSAVLSLLEVEDFDALIMFV-----RTKQA- 257

Query:   140 NAPSTTLLVDFL-SNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGI 198
                 T  L   L +  YK ++    L  ++  N R   +  ++ G   ++V+TD+AARG+
Sbjct:   258 ----TLDLASALEAKGYKAAA----LNGDIAQNQRERVIDSLKDGRLDIVVATDVAARGL 309

Query:   199 DLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKF 258
             D+P  TH++N D+P     Y+HR GRTGR   +  +     ++T  E  +LQ  E     
Sbjct:   310 DVPRITHVFNVDMPYDPESYVHRIGRTGR---AGREGRALLLVTPRERRMLQVIERVTGQ 366

Query:   259 KSEELTL 265
             K  E+ L
Sbjct:   367 KVAEVRL 373


>WB|WBGene00002244 [details] [associations]
            symbol:laf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
            "masculinization of hermaphroditic germ-line" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
            EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
            ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
            KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
            ArrayExpress:D0PV95 Uniprot:D0PV95
        Length = 708

 Score = 159 (61.0 bits), Expect = 5.5e-09, P = 5.5e-09
 Identities = 56/228 (24%), Positives = 100/228 (43%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++++ +  +E  + LV+DE D + +                     R T   SA+
Sbjct:   375 GRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSAT 434

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L     Q + K + V + V  +      +  + V   +  K   L+ L+ +  
Sbjct:   435 FPKEIQLL----AQDFLKENYVFLAVGRVGSTSENIMQKIVWVEEDEKRSYLMDLLDATG 490

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLE 179
               S  ++FV    E  + A +      L  +L+     + +V+ +  ++    R   L  
Sbjct:   491 DSSLTLVFV----ETKRGASD------LAYYLNRQ---NYEVVTIHGDLKQFEREKHLDL 537

Query:   180 VRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              R G   +LV+T +AARG+D+P   H+ N+DLP    +Y+HR GRTGR
Sbjct:   538 FRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGR 585


>RGD|68381 [details] [associations]
            symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box helicase 25"
           species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
           evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003724
           "RNA helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
           helicase activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
           evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
           [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
           process" evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
           evidence=IEA;ISO;ISS] [GO:0006417 "regulation of translation"
           evidence=IEA;ISO;ISS] [GO:0007275 "multicellular organismal
           development" evidence=IEA] [GO:0007286 "spermatid development"
           evidence=IEA;ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
           [GO:0033391 "chromatoid body" evidence=IEA;ISO;ISS]
           InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
           PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:68381
           GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
           GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
           SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
           eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
           PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
           EMBL:AF142629 IPI:IPI00213497 IPI:IPI00760145 IPI:IPI00760150
           RefSeq:NP_113818.2 UniGene:Rn.224821 ProteinModelPortal:Q9QY16
           SMR:Q9QY16 STRING:Q9QY16 PRIDE:Q9QY16 GeneID:58856 KEGG:rno:58856
           UCSC:RGD:68381 InParanoid:Q9QY16 NextBio:611449 ArrayExpress:Q9QY16
           Genevestigator:Q9QY16 GermOnline:ENSRNOG00000012260 Uniprot:Q9QY16
        Length = 483

 Score = 154 (59.3 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
 Identities = 50/171 (29%), Positives = 87/171 (50%)

Query:   100 FVIC-GKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGS 158
             +V+C  +K KYQ L ++         IIF   Q+ ++ K        L V+ + + ++  
Sbjct:   316 YVLCENRKDKYQALCNIYGGITIGQAIIFC--QTRRNAK-------WLTVEMMQDGHQ-- 364

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAID- 217
               V LL  E+    RA+ +   R G   +L++T++ ARGID+ + T + NFDLP +  + 
Sbjct:   365 --VSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQSEE 422

Query:   218 -----YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
                  YLHR GRTGR  F  +K    ++I  ++L +L + ++      ++L
Sbjct:   423 PDYETYLHRIGRTGR--FG-KKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 470

 Score = 39 (18.8 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
 Identities = 6/23 (26%), Positives = 14/23 (60%)

Query:     9 EKHIFKLESVQVLVIDEVDFLFN 31
             ++ +  L  ++V V+DE D + +
Sbjct:   232 KRKLIDLTKIRVFVLDEADVMID 254


>MGI|MGI:1353582 [details] [associations]
            symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISO] [GO:0003724 "RNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IDA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005634
            "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
            evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
            evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
            [GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0007286 "spermatid development" evidence=IDA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=ISO] [GO:0030154 "cell differentiation"
            evidence=IEA] [GO:0033391 "chromatoid body" evidence=IDA]
            [GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1353582 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
            GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:29118
            OrthoDB:EOG4NS3BD OMA:WHFAERI ChiTaRS:DDX25 EMBL:AF142630
            EMBL:AY380091 EMBL:AY380080 EMBL:AY380081 EMBL:AY380082
            EMBL:AY380083 EMBL:AY380084 EMBL:AY380085 EMBL:AY380086
            EMBL:AY380087 EMBL:AY380088 EMBL:AY380089 EMBL:AY380090
            EMBL:AK050693 EMBL:AK078340 EMBL:BC024852 EMBL:BC061130
            IPI:IPI00135420 IPI:IPI00759935 RefSeq:NP_038960.2
            UniGene:Mm.291723 ProteinModelPortal:Q9QY15 SMR:Q9QY15
            STRING:Q9QY15 PhosphoSite:Q9QY15 PaxDb:Q9QY15 PRIDE:Q9QY15
            Ensembl:ENSMUST00000034612 GeneID:30959 KEGG:mmu:30959
            UCSC:uc012gqi.1 InParanoid:Q9QY15 NextBio:307448 Bgee:Q9QY15
            CleanEx:MM_DDX25 Genevestigator:Q9QY15
            GermOnline:ENSMUSG00000032101 Uniprot:Q9QY15
        Length = 484

 Score = 154 (59.3 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
 Identities = 50/171 (29%), Positives = 87/171 (50%)

Query:   100 FVIC-GKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGS 158
             +V+C  +K KYQ L ++         IIF   Q+ ++ K        L V+ + + ++  
Sbjct:   317 YVLCENRKGKYQALCNIYGGITIGQAIIFC--QTRRNAK-------WLTVEMMQDGHQ-- 365

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAID- 217
               V LL  E+    RA+ +   R G   +L++T++ ARGID+ + T + NFDLP +  + 
Sbjct:   366 --VSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQSEE 423

Query:   218 -----YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
                  YLHR GRTGR  F  +K    ++I  ++L +L + ++      ++L
Sbjct:   424 PDYETYLHRIGRTGR--FG-KKGLAFNMIEVDKLPLLMKIQDHFNSNIKQL 471

 Score = 39 (18.8 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
 Identities = 6/23 (26%), Positives = 14/23 (60%)

Query:     9 EKHIFKLESVQVLVIDEVDFLFN 31
             ++ +  L  ++V V+DE D + +
Sbjct:   233 KRKLIDLTKIRVFVLDEADVMID 255


>UNIPROTKB|F1NIX2 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
            Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
        Length = 636

 Score = 158 (60.7 bits), Expect = 6.2e-09, P = 6.2e-09
 Identities = 59/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   302 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 361

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   362 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATG 416

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S  ++FV     ++KK  +A     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   417 KDSLTLVFV-----ETKKGADA-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 462

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   463 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 511


>UNIPROTKB|F1NIX1 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
            IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
            Uniprot:F1NIX1
        Length = 638

 Score = 158 (60.7 bits), Expect = 6.3e-09, P = 6.3e-09
 Identities = 59/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   303 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 362

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   363 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATG 417

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S  ++FV     ++KK  +A     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   418 KDSLTLVFV-----ETKKGADA-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 463

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   464 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 512


>UNIPROTKB|Q5ZLB0 [details] [associations]
            symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
            GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
            HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
            EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
            RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
            Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
            InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
        Length = 453

 Score = 156 (60.0 bits), Expect = 6.3e-09, P = 6.3e-09
 Identities = 51/180 (28%), Positives = 85/180 (47%)

Query:   101 VICGKKMKYQTLLSL------IQSDAPESGIIFV-GEQSEKS-----KKAGNAPSTTLLV 148
             V C    KYQT+  L      I S   +S ++++  E +  S         N   T LL+
Sbjct:   225 VKCAVSSKYQTVEKLQQYYIFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLL 284

Query:   149 DFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYN 208
               L  +       + L  +M+ N R  SL + +     +L++TD+A+RG+D+P    + N
Sbjct:   285 RNLGFT------AIPLHGQMSQNKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVIN 338

Query:   209 FDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTLQTQ 268
             FD+P  + DY+HR GRT R   S +  T    +T  ++ + QR E+ +  K     +Q +
Sbjct:   339 FDIPTHSKDYIHRVGRTARAGRSGKSIT---FVTQYDVELFQRIEHLIGKKLPAFPMQEE 395


>UNIPROTKB|Q9UHL0 [details] [associations]
            symbol:DDX25 "ATP-dependent RNA helicase DDX25"
            species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007286 "spermatid development" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006406 "mRNA export from
            nucleus" evidence=ISS] [GO:0006417 "regulation of translation"
            evidence=ISS] [GO:0033391 "chromatoid body" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 EMBL:CH471065
            GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
            EMBL:AF155140 EMBL:AY735312 EMBL:AY735301 EMBL:AY735302
            EMBL:AY735303 EMBL:AY735304 EMBL:AY735305 EMBL:AY735306
            EMBL:AY735307 EMBL:AY735308 EMBL:AY735309 EMBL:AY735310
            EMBL:AY735311 EMBL:AK312772 EMBL:BC035388 EMBL:BC050360
            IPI:IPI00296139 IPI:IPI00759454 RefSeq:NP_037396.3
            UniGene:Hs.420263 PDB:2RB4 PDBsum:2RB4 ProteinModelPortal:Q9UHL0
            SMR:Q9UHL0 STRING:Q9UHL0 PhosphoSite:Q9UHL0 DMDM:61222937
            PaxDb:Q9UHL0 PRIDE:Q9UHL0 Ensembl:ENST00000263576 GeneID:29118
            KEGG:hsa:29118 UCSC:uc001qcz.4 GeneCards:GC11P125773
            HGNC:HGNC:18698 HPA:HPA020090 HPA:HPA020137 MIM:607663
            neXtProt:NX_Q9UHL0 PharmGKB:PA38644 InParanoid:Q9UHL0 OMA:WHFAERI
            PhylomeDB:Q9UHL0 ChiTaRS:DDX25 EvolutionaryTrace:Q9UHL0
            GenomeRNAi:29118 NextBio:52207 ArrayExpress:Q9UHL0 Bgee:Q9UHL0
            CleanEx:HS_DDX25 Genevestigator:Q9UHL0 GermOnline:ENSG00000109832
            Uniprot:Q9UHL0
        Length = 483

 Score = 155 (59.6 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
 Identities = 52/174 (29%), Positives = 87/174 (50%)

Query:   100 FVICG-KKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGS 158
             +V+C  +K KYQ L ++  S      IIF   Q+ ++ K        L V+ + + ++  
Sbjct:   316 YVLCEHRKDKYQALCNIYGSITIGQAIIFC--QTRRNAK-------WLTVEMIQDGHQ-- 364

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAID- 217
               V LL  E+    RA+ +   R G   +L++T++ ARGID+ + T + NFDLP    + 
Sbjct:   365 --VSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEE 422

Query:   218 -----YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTLQ 266
                  YLHR GRTGR  F  +K    ++I  +EL  L + ++      ++L  +
Sbjct:   423 PDYETYLHRIGRTGR--FG-KKGLAFNMIEVDELPSLMKIQDHFNSSIKQLNAE 473

 Score = 37 (18.1 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query:    12 IFKLESVQVLVIDEVDFLFN 31
             +  L  ++V V+DE D + +
Sbjct:   235 LIDLTKIRVFVLDEADVMID 254


>UNIPROTKB|F1PIZ6 [details] [associations]
            symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
            EMBL:AAEX03003382 Ensembl:ENSCAFT00000016722 Uniprot:F1PIZ6
        Length = 462

 Score = 153 (58.9 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
 Identities = 50/177 (28%), Positives = 90/177 (50%)

Query:    94 SCLHHRFVIC-GKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLS 152
             S +   +V+C  +K KYQ L ++         IIF   Q+ ++ K        L V+ + 
Sbjct:   289 SNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFC--QTRRNAK-------WLTVEMMQ 339

Query:   153 NSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLP 212
             + ++    V LL  E+  + RA+ +   R G   +L++T+++ RGID+ + T + NFDLP
Sbjct:   340 DGHQ----VSLLSGELTVDQRASIIQRFRDGKEKVLITTNVSRRGIDVKQVTIVVNFDLP 395

Query:   213 RSAID------YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
              +  +      YLHR GRTGR  F  +K    ++I  ++L +L + ++      ++L
Sbjct:   396 VNQAEEPDYETYLHRIGRTGR--FG-KKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 449

 Score = 39 (18.8 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
 Identities = 6/23 (26%), Positives = 14/23 (60%)

Query:     9 EKHIFKLESVQVLVIDEVDFLFN 31
             ++ +  L  ++V V+DE D + +
Sbjct:   211 KRKLIDLTKIRVFVLDEADVMID 233


>TAIR|locus:2088237 [details] [associations]
            symbol:EIF4A1 "eukaryotic translation initiation factor
            4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=ISS] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
            "response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
            "gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
            evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
            GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
            GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
            IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
            UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
            EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
            Uniprot:F4JEL4
        Length = 415

 Score = 150 (57.9 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
 Identities = 32/86 (37%), Positives = 51/86 (59%)

Query:   143 STTLLVDFLSNSYKGSSD-VLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L++  +     V     +M+ N+R   + E R G   +L++TD+ ARGID+ 
Sbjct:   286 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQ 345

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + + + NFDLP    +YLHR GR+GR
Sbjct:   346 QVSLVINFDLPTQPENYLHRIGRSGR 371

 Score = 41 (19.5 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
 Identities = 5/26 (19%), Positives = 17/26 (65%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +  ++++   + +++++ V+DE D
Sbjct:   166 GRVFDMLKRQSLRADNIKMFVLDEAD 191


>TIGR_CMR|SO_1383 [details] [associations]
            symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
            ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
            PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
        Length = 433

 Score = 152 (58.6 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
 Identities = 36/94 (38%), Positives = 53/94 (56%)

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
             SR  +L E   G   +LV+T++AARG+D+P   ++ NFDLP  A DY+HR GRTGR   +
Sbjct:   282 SRRRALREFVSGKVRVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGR---A 338

Query:   232 DEKWTVTSIITSEELFVLQRYENELKFKSEELTL 265
              +     S ++ EE   L   E  +  K   +T+
Sbjct:   339 GKSGVAISFVSREEERTLADIEKLIGQKIRRITV 372

 Score = 39 (18.8 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L + +      L SV  LV+DE D
Sbjct:   133 GRLLEHLTACNLSLSSVDFLVLDEAD 158


>POMBASE|SPBP8B7.16c [details] [associations]
            symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
            species:4896 "Schizosaccharomyces pombe" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
            EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
            ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
            EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
            NextBio:20802492 Uniprot:P24782
        Length = 550

 Score = 149 (57.5 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
 Identities = 30/68 (44%), Positives = 44/68 (64%)

Query:   177 LLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWT 236
             L E R G   ++V+TD+A+RGID+   TH++N+D P +  DY+HR GRTGR   +  K T
Sbjct:   412 LNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGR---AGAKGT 468

Query:   237 VTSIITSE 244
               +  TS+
Sbjct:   469 AYTYFTSD 476

 Score = 46 (21.3 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
 Identities = 22/89 (24%), Positives = 36/89 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  +++ +   L  V  LV+DE D + +                   +RQTV  SA+ 
Sbjct:   254 GRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRP---DRQTVMFSATW 310

Query:    62 PQH-----RRFLHNCIQQKWTKSDVVHVH 85
             P+      R +L++ IQ      D+   H
Sbjct:   311 PKEVQRLARDYLNDYIQVTVGSLDLAASH 339


>UNIPROTKB|G5E631 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
            OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
            PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
            KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
        Length = 661

 Score = 157 (60.3 bits), Expect = 8.9e-09, P = 8.9e-09
 Identities = 58/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   324 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 383

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   384 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATG 438

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S  ++FV     ++KK  ++     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   439 KDSLTLVFV-----ETKKGADS-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 484

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   485 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 533


>UNIPROTKB|F1RX16 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
            EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
        Length = 661

 Score = 157 (60.3 bits), Expect = 8.9e-09, P = 8.9e-09
 Identities = 58/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   325 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 384

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   385 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATG 439

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S  ++FV     ++KK  ++     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   440 KDSLTLVFV-----ETKKGADS-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 485

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   486 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 534


>UNIPROTKB|J9P0V9 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
            RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
            KEGG:cfa:480886 Uniprot:J9P0V9
        Length = 662

 Score = 157 (60.3 bits), Expect = 8.9e-09, P = 8.9e-09
 Identities = 58/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   325 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 384

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   385 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATG 439

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S  ++FV     ++KK  ++     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   440 KDSLTLVFV-----ETKKGADS-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 485

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   486 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 534


>UNIPROTKB|O00571 [details] [associations]
            symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
            speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
            regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IDA] [GO:1900087
            "positive regulation of G1/S transition of mitotic cell cycle"
            evidence=IMP] [GO:0045948 "positive regulation of translational
            initiation" evidence=IMP] [GO:0031333 "negative regulation of
            protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IMP] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
            stress" evidence=IDA] [GO:0071243 "cellular response to
            arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
            regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
            [GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
            initiation factor binding" evidence=IDA] [GO:0042256 "mature
            ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
            subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0009615 "response to virus" evidence=IDA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IDA] [GO:0032728
            "positive regulation of interferon-beta production" evidence=TAS]
            [GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
            "positive regulation of chemokine (C-C motif) ligand 5 production"
            evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=IDA] [GO:0030308 "negative
            regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
            evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IMP]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006200 "ATP catabolic process" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
            GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
            GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
            GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
            GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
            GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
            GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
            EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
            EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
            IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
            UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
            PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
            DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
            PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
            SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
            Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
            KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
            HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
            neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
            OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
            ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
            GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
            CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
            GO:GO:0032728 Uniprot:O00571
        Length = 662

 Score = 157 (60.3 bits), Expect = 8.9e-09, P = 8.9e-09
 Identities = 58/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   325 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 384

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   385 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATG 439

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S  ++FV     ++KK  ++     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   440 KDSLTLVFV-----ETKKGADS-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 485

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   486 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 534


>UNIPROTKB|I3LDV0 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
            Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
        Length = 667

 Score = 157 (60.3 bits), Expect = 9.0e-09, P = 9.0e-09
 Identities = 58/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   326 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 385

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   386 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATG 440

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S  ++FV     ++KK  ++     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   441 KDSLTLVFV-----ETKKGADS-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 486

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   487 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 535


>TIGR_CMR|DET_0183 [details] [associations]
            symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:243164 "Dehalococcoides ethenogenes 195"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
            STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
            OMA:NFAPAVM ProtClustDB:CLSK837629
            BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
        Length = 560

 Score = 156 (60.0 bits), Expect = 9.1e-09, P = 9.1e-09
 Identities = 50/169 (29%), Positives = 86/169 (50%)

Query:    77 TKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSK 136
             T+++ V + +    P  S  H  + +   + K   L+ ++++   +S +IF         
Sbjct:   196 TQTNPVTIQIGTQAPASSVSHSVYPVKNHQ-KTPLLIEILKTTETKSVLIFA------RT 248

Query:   137 KAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAAR 196
             K G A +   L D +S +  G +   L +  ++ N R A +   R+G   +LV+TDIAAR
Sbjct:   249 KYG-AEN---LADEISRA--GFTTASL-QGNLSQNRRHAVMEGFRRGNFKILVATDIAAR 301

Query:   197 GIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEE 245
             G+D+   +H+ N+D+P +  DY HR GRTGR  F D      S++T  +
Sbjct:   302 GLDIDHISHVINYDMPDTPEDYTHRIGRTGR--F-DRTGQALSLVTGRD 347


>UNIPROTKB|E9PIF2 [details] [associations]
            symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
            Pfam:PF13959 HGNC:HGNC:2735 ChiTaRS:DDX10 EMBL:AP002453
            EMBL:AP003027 EMBL:AP003387 IPI:IPI00982941
            ProteinModelPortal:E9PIF2 SMR:E9PIF2 Ensembl:ENST00000526794
            UCSC:uc001pkl.1 ArrayExpress:E9PIF2 Bgee:E9PIF2 Uniprot:E9PIF2
        Length = 835

 Score = 158 (60.7 bits), Expect = 9.2e-09, P = 9.2e-09
 Identities = 53/208 (25%), Positives = 86/208 (41%)

Query:    52 RQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQT 111
             RQT+  SA+     + + +  +      + V VH  A    P+ L   +++C  + K   
Sbjct:   247 RQTLLFSAT---QTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISV 303

Query:   112 LLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFN 171
             L S ++S   +  I+F     E             L         G S +L L       
Sbjct:   304 LYSFLRSHLKKKSIVFFSSCKE----------VQYLYRVFCRLRPGVS-ILALHGRQQQM 352

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
              R     E  +    +L +TDIAARG+D P    +  FD P  A  Y+HRAGRT R  + 
Sbjct:   353 RRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR--YK 410

Query:   232 DEKWTVTSIITSEELFVLQRYENELKFK 259
             ++   +  ++ SE+  V Q  + ++  K
Sbjct:   411 EDGEALLILLPSEKAMVQQLLQKKVPVK 438


>DICTYBASE|DDB_G0269986 [details] [associations]
            symbol:DDB_G0269986 species:44689 "Dictyostelium
            discoideum" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269986
            GO:GO:0005524 EMBL:AAFI02000005 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_646448.1
            EnsemblProtists:DDB0190716 GeneID:8617407 KEGG:ddi:DDB_G0269986
            InParanoid:Q55CN3 Uniprot:Q55CN3
        Length = 796

 Score = 143 (55.4 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
 Identities = 41/130 (31%), Positives = 65/130 (50%)

Query:   130 EQSEKSKKAGNAPSTTLLVD-FLS-NSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYL 187
             +Q  K+    N P +    + FL+ N    +S    L  EM  + R+ +      G    
Sbjct:   644 QQKRKTLIFCNKPDSCRSTEYFLTENGINATS----LHGEMPPHRRSENWKSFLNGDKEF 699

Query:   188 LVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELF 247
             LV+TDIA+RGID+    H+  FD P + IDYLHR GRT R   +  +  VT +IT ++ +
Sbjct:   700 LVATDIASRGIDIGLIDHVILFDFPSNPIDYLHRIGRTAR---AGNRGLVTCLITHKDRY 756

Query:   248 VLQRYENELK 257
             +    +  ++
Sbjct:   757 LADEIKESIR 766

 Score = 57 (25.1 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
 Identities = 16/30 (53%), Positives = 20/30 (66%)

Query:     2 GSLCQLIE-KHIFKLESVQVLVIDEVDFLF 30
             GSL +LIE K IF    ++ LVIDE D +F
Sbjct:   433 GSLIKLIEQKKIF-FSKLRHLVIDEADSMF 461


>POMBASE|SPBC17D1.06 [details] [associations]
            symbol:dbp3 "ATP-dependent RNA helicase Dbp3
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
            "ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
            GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
            PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
            STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
            GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
            Uniprot:Q10202
        Length = 578

 Score = 156 (60.0 bits), Expect = 9.5e-09, P = 9.5e-09
 Identities = 63/251 (25%), Positives = 109/251 (43%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN--RQTVFASA 59
             G L  LI         V  LV+DE D + +                   N  RQTVF SA
Sbjct:   294 GRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSRQTVFFSA 353

Query:    60 SIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSD 119
             + P+  R L     +   K  +    + A + +   +    ++   + K + L +L++  
Sbjct:   354 TWPESVRALAATFLKDPVKITIGSDELAASQNITQIVE---ILDDPRSKERMLDNLLRKH 410

Query:   120 APESG-----IIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRA 174
                 G     +IFV  + E ++  G           L+  Y    +V+ +  +M+  +R 
Sbjct:   411 LSSGGKDDKILIFVLYKKEAARVEGT----------LARKY----NVVGIHGDMSQGARL 456

Query:   175 ASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEK 234
              +L + + G   +LV+TD+AARG+D+P+   + N   P +  DY+HR GRTGR   ++ K
Sbjct:   457 QALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGR---ANTK 513

Query:   235 WTVTSIITSEE 245
              T  +  T ++
Sbjct:   514 GTAITFFTPQD 524


>UNIPROTKB|Q13206 [details] [associations]
            symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471065
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
            HOGENOM:HOG000268801 CTD:1662 HOVERGEN:HBG102756 OrthoDB:EOG4BK536
            EMBL:U28042 EMBL:AB040537 EMBL:AK315216 EMBL:BC091521 EMBL:BC093654
            EMBL:BC093656 IPI:IPI00297900 RefSeq:NP_004389.2 UniGene:Hs.591931
            PDB:2PL3 PDBsum:2PL3 ProteinModelPortal:Q13206 SMR:Q13206
            IntAct:Q13206 STRING:Q13206 PhosphoSite:Q13206 DMDM:76803554
            SWISS-2DPAGE:Q13206 PaxDb:Q13206 PeptideAtlas:Q13206 PRIDE:Q13206
            Ensembl:ENST00000322536 GeneID:1662 KEGG:hsa:1662 UCSC:uc001pkm.3
            GeneCards:GC11P108569 HGNC:HGNC:2735 HPA:HPA004691 MIM:601235
            neXtProt:NX_Q13206 PharmGKB:PA27200 InParanoid:Q13206 OMA:ADKVIEP
            ChiTaRS:DDX10 EvolutionaryTrace:Q13206 GenomeRNAi:1662 NextBio:6838
            ArrayExpress:Q13206 Bgee:Q13206 CleanEx:HS_DDX10
            Genevestigator:Q13206 GermOnline:ENSG00000178105 Uniprot:Q13206
        Length = 875

 Score = 158 (60.7 bits), Expect = 9.8e-09, P = 9.8e-09
 Identities = 53/208 (25%), Positives = 86/208 (41%)

Query:    52 RQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQT 111
             RQT+  SA+     + + +  +      + V VH  A    P+ L   +++C  + K   
Sbjct:   247 RQTLLFSAT---QTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISV 303

Query:   112 LLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFN 171
             L S ++S   +  I+F     E             L         G S +L L       
Sbjct:   304 LYSFLRSHLKKKSIVFFSSCKE----------VQYLYRVFCRLRPGVS-ILALHGRQQQM 352

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
              R     E  +    +L +TDIAARG+D P    +  FD P  A  Y+HRAGRT R  + 
Sbjct:   353 RRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR--YK 410

Query:   232 DEKWTVTSIITSEELFVLQRYENELKFK 259
             ++   +  ++ SE+  V Q  + ++  K
Sbjct:   411 EDGEALLILLPSEKAMVQQLLQKKVPVK 438


>UNIPROTKB|I3LLD5 [details] [associations]
            symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
            Uniprot:I3LLD5
        Length = 401

 Score = 150 (57.9 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  +  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   275 NTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 334

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    +++T E+   L+  E       E
Sbjct:   335 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINMVTEEDKRTLRDIETFYNTSIE 391

Query:   262 ELTL 265
             E+ L
Sbjct:   392 EMPL 395

 Score = 39 (18.8 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
 Identities = 15/91 (16%), Positives = 37/91 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  ++ +     + +++ V+DE D + +                  +N Q V  SA++
Sbjct:   160 GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN---SNTQVVLLSATM 216

Query:    62 PQH-----RRFLHNCIQQKWTKSDVVHVHVN 87
             P       ++F+ + I+   T   +   ++N
Sbjct:   217 PSDVLEVTKKFMRDPIRIXLTLEGIRQFYIN 247


>UNIPROTKB|Q9NZE6 [details] [associations]
            symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
            UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
            IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
            UCSC:uc003fqv.3 Uniprot:Q9NZE6
        Length = 312

 Score = 151 (58.2 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  L  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   186 NTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 245

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T E+  +L+  E       E
Sbjct:   246 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINFVTEEDKRILRDIETFYNTTVE 302

Query:   262 ELTL 265
             E+ +
Sbjct:   303 EMPM 306


>UNIPROTKB|F1LP27 [details] [associations]
            symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
            Uniprot:F1LP27
        Length = 312

 Score = 151 (58.2 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  L  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   186 NTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 245

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T E+  +L+  E       E
Sbjct:   246 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINFVTEEDKRILRDIETFYNTTVE 302

Query:   262 ELTL 265
             E+ +
Sbjct:   303 EMPM 306


>SGD|S000001767 [details] [associations]
            symbol:TIF1 "Translation initiation factor eIF4A"
            species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
            initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
            "eukaryotic translation initiation factor 4F complex"
            evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
            SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
            EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
            EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
            RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
            PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
            PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
            SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
            STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
            EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
            KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
            EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
            GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
        Length = 395

 Score = 147 (56.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 32/91 (35%), Positives = 52/91 (57%)

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSD 232
             R   + E R G   +L+STD+ ARGID+ + + + N+DLP +  +Y+HR GR GR  F  
Sbjct:   299 RDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGR--FG- 355

Query:   233 EKWTVTSIITSEELFVLQRYENELKFKSEEL 263
              K    + +T+E++  ++  E     + EEL
Sbjct:   356 RKGVAINFVTNEDVGAMRELEKFYSTQIEEL 386

 Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 6/26 (23%), Positives = 16/26 (61%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +   I++  F+ + +++ ++DE D
Sbjct:   148 GRVFDNIQRRRFRTDKIKMFILDEAD 173


>SGD|S000003674 [details] [associations]
            symbol:TIF2 "Translation initiation factor eIF4A"
            species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
            initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
            initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
            [GO:0016281 "eukaryotic translation initiation factor 4F complex"
            evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0006413 "translational initiation"
            evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
            GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
            EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
            RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
            PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
            PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
            SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
            STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
            EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
            KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
            EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
            GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
        Length = 395

 Score = 147 (56.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 32/91 (35%), Positives = 52/91 (57%)

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSD 232
             R   + E R G   +L+STD+ ARGID+ + + + N+DLP +  +Y+HR GR GR  F  
Sbjct:   299 RDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGR--FG- 355

Query:   233 EKWTVTSIITSEELFVLQRYENELKFKSEEL 263
              K    + +T+E++  ++  E     + EEL
Sbjct:   356 RKGVAINFVTNEDVGAMRELEKFYSTQIEEL 386

 Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 6/26 (23%), Positives = 16/26 (61%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +   I++  F+ + +++ ++DE D
Sbjct:   148 GRVFDNIQRRRFRTDKIKMFILDEAD 173


>UNIPROTKB|E2RKU0 [details] [associations]
            symbol:DDX28 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 CTD:55794 GeneTree:ENSGT00670000098028 OMA:LCSKGWK
            EMBL:AAEX03004122 RefSeq:XP_546867.1 Ensembl:ENSCAFT00000032372
            GeneID:489747 KEGG:cfa:489747 Uniprot:E2RKU0
        Length = 527

 Score = 139 (54.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 37/115 (32%), Positives = 63/115 (54%)

Query:   140 NAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGID 199
             N+ ST   + ++ + +K     L L+ +M  + RA      ++G   +L+ TDIA+RG+D
Sbjct:   401 NSSSTVNWLGYILDDHKIQH--LRLQGQMPASMRAGIFQCFQKGSRDILLCTDIASRGLD 458

Query:   200 LPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSE-ELFVLQRYE 253
                   + N+D P +  DY+HRAGR GR   S+   TV S +T   ++ ++Q+ E
Sbjct:   459 STHVELVVNYDFPLTLQDYIHRAGRVGRVG-SEVPGTVISFVTHPWDVSLVQKIE 512

 Score = 56 (24.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 10/30 (33%), Positives = 19/30 (63%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G+L + ++ H+  L+ +  LV+DE D L +
Sbjct:   260 GALWKALKSHLVSLKQLSFLVLDEADTLLD 289


>RGD|1309586 [details] [associations]
            symbol:RGD1309586 "similar to probable ATP-dependent RNA
            helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
            OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
            RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
            GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
            NextBio:684798 Uniprot:D3ZN21
        Length = 659

 Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 59/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   323 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 382

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   383 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATG 437

Query:   121 PESGI-IFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S I +FV     ++KK  ++     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   438 KDSLILVFV-----ETKKGADS-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 483

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   484 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 532


>MGI|MGI:91842 [details] [associations]
            symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
            GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
            GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
            IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
            ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
            PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
            Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
            InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
            Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
            GermOnline:ENSMUSG00000039224 Uniprot:P16381
        Length = 660

 Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 59/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   324 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 383

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   384 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATG 438

Query:   121 PESGI-IFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S I +FV     ++KK  ++     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   439 KDSLILVFV-----ETKKGADS-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 484

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   485 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 533


>UNIPROTKB|A7YWQ8 [details] [associations]
            symbol:DDX28 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 CTD:55794 HOGENOM:HOG000008689 HOVERGEN:HBG081424
            OMA:RARRDHF OrthoDB:EOG42RD7H GeneTree:ENSGT00670000098028
            EMBL:DAAA02046690 EMBL:BC134724 IPI:IPI00689474
            RefSeq:NP_001098892.1 UniGene:Bt.3066 Ensembl:ENSBTAT00000005622
            GeneID:539411 KEGG:bta:539411 InParanoid:A7YWQ8 NextBio:20877971
            Uniprot:A7YWQ8
        Length = 545

 Score = 145 (56.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 37/115 (32%), Positives = 64/115 (55%)

Query:   140 NAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGID 199
             N+ ST   + ++ + +K     L L+ +M  + RA      ++G   +L+ TDIA+RG+D
Sbjct:   405 NSSSTVNWLGYILDDHKIQH--LRLQGQMPASMRAGIFQSFQKGSRDILLCTDIASRGLD 462

Query:   200 LPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSE-ELFVLQRYE 253
               +   + N+D P +  DY+HRAGR GR   S+   TV S +T   ++ ++Q+ E
Sbjct:   463 STQVELVINYDFPLTLQDYIHRAGRVGRVG-SEVPGTVISFVTHPWDVSLVQKIE 516

 Score = 49 (22.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G+L + ++  +  L  +  LV+DEVD L +
Sbjct:   264 GALWKALKGQLISLAQLSFLVLDEVDTLLD 293


>UNIPROTKB|Q8EBV7 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 153 (58.9 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 33/90 (36%), Positives = 54/90 (60%)

Query:   167 EMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTG 226
             +++  +R   L E +QG   +LV+TD+AARG+D+ E  ++ NF+LP  A DY+HR GRTG
Sbjct:   278 DLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTG 337

Query:   227 RKPFSDEKWTVTSIITSEELFVLQRYENEL 256
             R   +       ++ + E+  +L+  E  L
Sbjct:   338 R---AGSAGLAITLFSQEDALLLEEVETLL 364


>TIGR_CMR|SO_3388 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 153 (58.9 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 33/90 (36%), Positives = 54/90 (60%)

Query:   167 EMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTG 226
             +++  +R   L E +QG   +LV+TD+AARG+D+ E  ++ NF+LP  A DY+HR GRTG
Sbjct:   278 DLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTG 337

Query:   227 RKPFSDEKWTVTSIITSEELFVLQRYENEL 256
             R   +       ++ + E+  +L+  E  L
Sbjct:   338 R---AGSAGLAITLFSQEDALLLEEVETLL 364


>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
            symbol:PFD1070w "eukaryotic initiation factor,
            putative" species:5833 "Plasmodium falciparum" [GO:0016281
            "eukaryotic translation initiation factor 4F complex" evidence=ISS]
            [GO:0003743 "translation initiation factor activity" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0006446 "regulation of translational initiation" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
            GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
            OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
            SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
            KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
            ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
        Length = 390

 Score = 148 (57.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
 Identities = 47/168 (27%), Positives = 83/168 (49%)

Query:   100 FVICGKKM-KYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGS 158
             FV   K+  KY+TL  L +S      ++F               +T + VD+L+     S
Sbjct:   234 FVSIEKEQWKYETLADLYESLTITQAVVFC--------------NTQMKVDWLTKKMLES 279

Query:   159 S-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAID 217
             +  V  +   M+ + R   +L+ RQ    +L+STDI  RG+D+ E + + N+DLP S   
Sbjct:   280 NFTVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNSRES 339

Query:   218 YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTL 265
             Y+HR GR+GR  F   K    + + ++++ +L+  E     + +E+ +
Sbjct:   340 YIHRIGRSGR--FG-RKGVAINFVKNDDIKILRDIEQYYSTQIDEMPM 384

 Score = 40 (19.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
 Identities = 13/54 (24%), Positives = 25/54 (46%)

Query:    68 LHNCIQQKWTKSDVVHVH--VNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSD 119
             ++ CI  K    D+  ++  V+ I   P  ++H   +   K KY   L + ++D
Sbjct:   116 IYCCIGGKKMSDDIKALNNGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEAD 169


>UNIPROTKB|Q8IFN9 [details] [associations]
            symbol:PFD1070w "Eukaryotic initiation factor, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
            initiation factor activity" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
            "regulation of translational initiation" evidence=ISS] [GO:0016281
            "eukaryotic translation initiation factor 4F complex" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
            GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
            OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
            SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
            KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
            ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
        Length = 390

 Score = 148 (57.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
 Identities = 47/168 (27%), Positives = 83/168 (49%)

Query:   100 FVICGKKM-KYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGS 158
             FV   K+  KY+TL  L +S      ++F               +T + VD+L+     S
Sbjct:   234 FVSIEKEQWKYETLADLYESLTITQAVVFC--------------NTQMKVDWLTKKMLES 279

Query:   159 S-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAID 217
             +  V  +   M+ + R   +L+ RQ    +L+STDI  RG+D+ E + + N+DLP S   
Sbjct:   280 NFTVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNSRES 339

Query:   218 YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEELTL 265
             Y+HR GR+GR  F   K    + + ++++ +L+  E     + +E+ +
Sbjct:   340 YIHRIGRSGR--FG-RKGVAINFVKNDDIKILRDIEQYYSTQIDEMPM 384

 Score = 40 (19.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
 Identities = 13/54 (24%), Positives = 25/54 (46%)

Query:    68 LHNCIQQKWTKSDVVHVH--VNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSD 119
             ++ CI  K    D+  ++  V+ I   P  ++H   +   K KY   L + ++D
Sbjct:   116 IYCCIGGKKMSDDIKALNNGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEAD 169


>WB|WBGene00019245 [details] [associations]
            symbol:sacy-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
            epithelium" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
            GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
            OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
            ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
            EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
            UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
            NextBio:875413 Uniprot:Q9N5K1
        Length = 630

 Score = 137 (53.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
 Identities = 33/94 (35%), Positives = 51/94 (54%)

Query:   171 NSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPF 230
             + R A +   R+    +LV+TD+A++G+D     H+ NFD+P    +Y+HR GRTGR   
Sbjct:   478 SDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGR--- 534

Query:   231 SDEKWTVTSIITSE-ELFVLQRYENELKFKSEEL 263
             S  K   T+ I  + E+ VL   +  L    +EL
Sbjct:   535 SGRKGLATTFINKKSEMSVLSDLKQLLAEAGQEL 568

 Score = 60 (26.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
 Identities = 18/66 (27%), Positives = 29/66 (43%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  ++ K I  LE  + LV+DE D + +                    RQT+  SA++
Sbjct:   331 GRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKA---QRQTLLFSATM 387

Query:    62 PQHRRF 67
             P+  +F
Sbjct:   388 PRKIQF 393


>CGD|CAL0000056 [details] [associations]
            symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
            transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
            EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
            ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
            KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
        Length = 539

 Score = 154 (59.3 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 54/182 (29%), Positives = 86/182 (47%)

Query:    87 NAIKPLPSCLHHRFVICGKKMKYQTLLSLIQS-----DAPESGIIF--VGEQSEKS---- 135
             N I+ L     H  V      KYQT  +L+QS     D  ++ I+   + E   KS    
Sbjct:   309 NKIEKLQRASLHNPVRVAVSSKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVF 368

Query:   136 -KKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIA 194
              +   +A  T LL   L        + + L  +++ + R  SL + +     +LV+TD+A
Sbjct:   369 TRTVAHAQRTALLARILG------FNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVA 422

Query:   195 ARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYEN 254
             ARG+D+P    + N+D+P  +  Y+HR GRT R   S +     S+IT  +L +  R E+
Sbjct:   423 ARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKS---ISLITQYDLEMYLRIES 479

Query:   255 EL 256
              L
Sbjct:   480 VL 481


>UNIPROTKB|D3IVZ2 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
            EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
            Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
        Length = 661

 Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 58/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   325 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSAT 384

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   385 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATG 439

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S  ++FV     ++KK  ++     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   440 TDSLTLVFV-----ETKKGADS-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 485

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   486 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPGDIEEYVHRIGRTGR 534


>GENEDB_PFALCIPARUM|MAL8P1.19 [details] [associations]
            symbol:MAL8P1.19 "RNA helicase, putative"
            species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 GO:GO:0020011
            EMBL:AL844507 RefSeq:XP_001349256.1 ProteinModelPortal:Q8IBA2
            IntAct:Q8IBA2 MINT:MINT-1608586 EnsemblProtists:MAL8P1.19:mRNA
            GeneID:2655364 KEGG:pfa:MAL8P1.19 EuPathDB:PlasmoDB:PF3D7_0827000
            HOGENOM:HOG000282591 Uniprot:Q8IBA2
        Length = 1289

 Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 73/277 (26%), Positives = 121/277 (43%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L+++    LE V++L+IDE D L                     ++QT+  SA++
Sbjct:   290 GRLSFLLQETKLSLEKVEILIIDEADRLLELNYYNDMNVIYKSLNNT--SKQTILVSATL 347

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P +   + N  + K    DV+ +   +   +   +H  F+ C    KY  LL LI     
Sbjct:   348 PTN---VENYFKLKLNNPDVLFL--TSDNTINEKVHLHFLFCRSYEKYALLLRLI----- 397

Query:   122 ESGIIFVGEQSEKSKKAGNAP---STTLLVDFLSN---SYKGSSDVLLLEEEMNFNSRAA 175
                +IF      K KK G       T   + F SN    +K    +L    + +F     
Sbjct:   398 ---LIF------KKKKLGKTMIFFCTKYHILFFSNILKHFKIHHSILYGNSDTSFRFEQI 448

Query:   176 SLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKW 235
             +     +   +LLV TD+A+RGI++    ++ N++LP S   ++HR GR  R   S   +
Sbjct:   449 NNFTKNEHIQFLLV-TDVASRGINITSVQNVINYNLPFSPKLFIHRIGRACRTDISG--Y 505

Query:   236 TVTSIITSEELFVLQRYE------NELKF-KSEELTL 265
              + S++T ++  +L  YE       +LKF K E+  L
Sbjct:   506 GI-SLLTYQD--ILYAYEICFFIGKKLKFFKKEKSVL 539


>UNIPROTKB|Q8IBA2 [details] [associations]
            symbol:MAL8P1.19 "RNA helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 GO:GO:0020011 EMBL:AL844507
            RefSeq:XP_001349256.1 ProteinModelPortal:Q8IBA2 IntAct:Q8IBA2
            MINT:MINT-1608586 EnsemblProtists:MAL8P1.19:mRNA GeneID:2655364
            KEGG:pfa:MAL8P1.19 EuPathDB:PlasmoDB:PF3D7_0827000
            HOGENOM:HOG000282591 Uniprot:Q8IBA2
        Length = 1289

 Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 73/277 (26%), Positives = 121/277 (43%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L+++    LE V++L+IDE D L                     ++QT+  SA++
Sbjct:   290 GRLSFLLQETKLSLEKVEILIIDEADRLLELNYYNDMNVIYKSLNNT--SKQTILVSATL 347

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P +   + N  + K    DV+ +   +   +   +H  F+ C    KY  LL LI     
Sbjct:   348 PTN---VENYFKLKLNNPDVLFL--TSDNTINEKVHLHFLFCRSYEKYALLLRLI----- 397

Query:   122 ESGIIFVGEQSEKSKKAGNAP---STTLLVDFLSN---SYKGSSDVLLLEEEMNFNSRAA 175
                +IF      K KK G       T   + F SN    +K    +L    + +F     
Sbjct:   398 ---LIF------KKKKLGKTMIFFCTKYHILFFSNILKHFKIHHSILYGNSDTSFRFEQI 448

Query:   176 SLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKW 235
             +     +   +LLV TD+A+RGI++    ++ N++LP S   ++HR GR  R   S   +
Sbjct:   449 NNFTKNEHIQFLLV-TDVASRGINITSVQNVINYNLPFSPKLFIHRIGRACRTDISG--Y 505

Query:   236 TVTSIITSEELFVLQRYE------NELKF-KSEELTL 265
              + S++T ++  +L  YE       +LKF K E+  L
Sbjct:   506 GI-SLLTYQD--ILYAYEICFFIGKKLKFFKKEKSVL 539


>TAIR|locus:2034481 [details] [associations]
            symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
            "RNA methylation" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
            EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
            OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
            IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
            UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
            PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
            KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
            PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
            GermOnline:AT1G31970 Uniprot:Q9C551
        Length = 537

 Score = 138 (53.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 26/57 (45%), Positives = 38/57 (66%)

Query:   171 NSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R  SL   ++G   LLV+TD+AARG+D+P+   + N+  P +  DY+HR GRTGR
Sbjct:   403 SERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGR 459

 Score = 56 (24.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  LIE ++ +L  V  +V+DE D
Sbjct:   250 GRLRDLIESNVLRLSDVSFVVLDEAD 275

 Score = 37 (18.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query:    99 RFVICGK---KMKYQTLLSLIQSDAPES 123
             + V+ GK   + KY  L +  +S+ PE+
Sbjct:    99 KVVVTGKGVEEAKYAALKTFAESNLPEN 126


>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
            symbol:PF08_0096 "RNA helicase, putative"
            species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
            HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
            ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
            EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
            EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
            ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
        Length = 941

 Score = 153 (58.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 42/132 (31%), Positives = 69/132 (52%)

Query:    96 LHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSY 155
             +    V   ++ K   LL+L+  +     I+FV    E  +KA       ++  FLSN  
Sbjct:   620 IKQNLVFVEEENKCNYLLNLLAENNNGLTILFV----ETKRKAD------IIERFLSNQ- 668

Query:   156 KGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSA 215
                 + + +  + + + R  +L   ++G   +LV+TD+AARG+D+    H+ NFDLP + 
Sbjct:   669 --KLNAVCIHGDKSQDERERALKLFKRGIKNILVATDVAARGLDISNIKHVINFDLPSNI 726

Query:   216 IDYLHRAGRTGR 227
              DY+HR GRTGR
Sbjct:   727 DDYIHRIGRTGR 738

 Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  ++EK   KL     LV+DE D
Sbjct:   510 GRLNDILEKGKIKLFLTTFLVLDEAD 535


>UNIPROTKB|Q8IAU1 [details] [associations]
            symbol:PF08_0096 "RNA helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
            HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
            ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
            EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
            EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
            ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
        Length = 941

 Score = 153 (58.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 42/132 (31%), Positives = 69/132 (52%)

Query:    96 LHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSY 155
             +    V   ++ K   LL+L+  +     I+FV    E  +KA       ++  FLSN  
Sbjct:   620 IKQNLVFVEEENKCNYLLNLLAENNNGLTILFV----ETKRKAD------IIERFLSNQ- 668

Query:   156 KGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSA 215
                 + + +  + + + R  +L   ++G   +LV+TD+AARG+D+    H+ NFDLP + 
Sbjct:   669 --KLNAVCIHGDKSQDERERALKLFKRGIKNILVATDVAARGLDISNIKHVINFDLPSNI 726

Query:   216 IDYLHRAGRTGR 227
              DY+HR GRTGR
Sbjct:   727 DDYIHRIGRTGR 738

 Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G L  ++EK   KL     LV+DE D
Sbjct:   510 GRLNDILEKGKIKLFLTTFLVLDEAD 535


>DICTYBASE|DDB_G0269966 [details] [associations]
            symbol:ddx1 "SPla/RYanodine receptor SPRY
            domain-containing protein" species:44689 "Dictyostelium discoideum"
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
            evidence=IEA;ISS] [GO:0033677 "DNA/RNA helicase activity"
            evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
            [GO:0008143 "poly(A) RNA binding" evidence=ISS] [GO:0006302
            "double-strand break repair" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0004518 "nuclease activity" evidence=IEA;ISS]
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003712
            "transcription cofactor activity" evidence=ISS] [GO:0003682
            "chromatin binding" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR003877
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00622
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0269966 GO:GO:0005524 GO:GO:0005634
            EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003682
            InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0004527 GO:GO:0006302
            GO:GO:0003712 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
            GO:GO:0004518 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0032508 GO:GO:0008143
            GO:GO:0033677 KO:K13177 OMA:TLNNVKQ RefSeq:XP_646435.1
            ProteinModelPortal:Q55CP6 STRING:Q55CP6 EnsemblProtists:DDB0233650
            GeneID:8617394 KEGG:ddi:DDB_G0269966 ProtClustDB:CLSZ2431424
            Uniprot:Q55CP6
        Length = 765

 Score = 148 (57.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 47/147 (31%), Positives = 69/147 (46%)

Query:   105 KKMKYQTLLSLIQSDAPESGIIFVGEQSEKS------KKAGNAPSTTLLVDFLSNSYKGS 158
             K +K Q LL  IQS   +  IIF   + +        K AG   ++ L  +F S    G 
Sbjct:   518 KLLKAQLLLKCIQSFKMDQAIIFARTRLDCDHIHQFLKDAGGGNTSGLEGEFSSTVLHGG 577

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDY 218
              ++          +R  +L + R G    L+ TD+AARGID+    ++ N+ LP S  DY
Sbjct:   578 DNIS--------RARKDNLEKFRNGDVRFLICTDVAARGIDIRGLPYMINYTLPESFEDY 629

Query:   219 LHRAGRTGRKPFSDEKWTVTSIITSEE 245
             +HR GR GR   SD      S++  E+
Sbjct:   630 IHRVGRVGR---SDRIGLAISLVAYEQ 653

 Score = 48 (22.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 24/111 (21%), Positives = 47/111 (42%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L+++    L S++  V+DE D L +                   N Q +F SA++
Sbjct:   378 GRLESLVKEGSIDLSSIKFFVLDEADQLIDDNLAIVNFIYNKLPIG--QNLQVLFFSATL 435

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTL 112
                 + +  C  ++ TK+    V +     +P  + H +V     +K+++L
Sbjct:   436 -HSTKVIKFC--EQITKNPT-WVDLKGRDFIPDLITHAYVKADP-IKFESL 481


>UNIPROTKB|E2RRQ7 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
            Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
        Length = 706

 Score = 155 (59.6 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 59/228 (25%), Positives = 101/228 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   367 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 426

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+  +A
Sbjct:   427 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLL--NA 479

Query:   121 PESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLLE 179
              ESG   +     ++KK  ++     L DFL +  Y  +S    +  + +   R  +L +
Sbjct:   480 TESGKDSLTLVFVETKKGADS-----LEDFLYHEGYACTS----IHGDRSQRDREEALHQ 530

Query:   180 VRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
              R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   531 FRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 578


>UNIPROTKB|Q8ECL2 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 152 (58.6 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 51/172 (29%), Positives = 83/172 (48%)

Query:    94 SCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSN 153
             S +  R +   ++ K   L  LI+       +IFV      +K   N  +  L       
Sbjct:   226 STIEQRVITVNREQKTALLAHLIKQHQWSQALIFVS-----AKNTCNHLAQKL------- 273

Query:   154 SYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPR 213
             S +G S  +   ++    +R   L   + G   +L++TDIAARGID+ +   + NFDLPR
Sbjct:   274 SKRGISAEVFHGDKAQ-GARTRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPR 332

Query:   214 SAIDYLHRAGRTGRKPFSDEKWTVTSIITSEEL--FVLQRYENELKFKSEEL 263
             S  DY+HR GR+GR   + E     ++I+ EE   F +   +N++K   E++
Sbjct:   333 SPADYMHRIGRSGR---AGEAGLAVTLISHEEYHHFGVIEKKNKIKLVREQI 381


>TIGR_CMR|SO_3125 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 152 (58.6 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 51/172 (29%), Positives = 83/172 (48%)

Query:    94 SCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSN 153
             S +  R +   ++ K   L  LI+       +IFV      +K   N  +  L       
Sbjct:   226 STIEQRVITVNREQKTALLAHLIKQHQWSQALIFVS-----AKNTCNHLAQKL------- 273

Query:   154 SYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPR 213
             S +G S  +   ++    +R   L   + G   +L++TDIAARGID+ +   + NFDLPR
Sbjct:   274 SKRGISAEVFHGDKAQ-GARTRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPR 332

Query:   214 SAIDYLHRAGRTGRKPFSDEKWTVTSIITSEEL--FVLQRYENELKFKSEEL 263
             S  DY+HR GR+GR   + E     ++I+ EE   F +   +N++K   E++
Sbjct:   333 SPADYMHRIGRSGR---AGEAGLAVTLISHEEYHHFGVIEKKNKIKLVREQI 381


>MGI|MGI:1919236 [details] [associations]
            symbol:Ddx28 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 28"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042645
            "mitochondrial nucleoid" evidence=ISO] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919236 GO:GO:0005739
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 GO:GO:0042645
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 CTD:55794
            HOGENOM:HOG000008689 HOVERGEN:HBG081424 OrthoDB:EOG42RD7H
            EMBL:AK010396 EMBL:AK163480 EMBL:BC120556 EMBL:BC120582
            IPI:IPI00109544 RefSeq:NP_082314.2 UniGene:Mm.307515
            ProteinModelPortal:Q9CWT6 SMR:Q9CWT6 PhosphoSite:Q9CWT6
            PRIDE:Q9CWT6 Ensembl:ENSMUST00000058579 GeneID:71986 KEGG:mmu:71986
            GeneTree:ENSGT00670000098028 InParanoid:Q0VBM0 OMA:LCSKGWK
            NextBio:335138 Bgee:Q9CWT6 CleanEx:MM_DDX28 Genevestigator:Q9CWT6
            GermOnline:ENSMUSG00000045538 Uniprot:Q9CWT6
        Length = 540

 Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
 Identities = 37/115 (32%), Positives = 63/115 (54%)

Query:   140 NAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGID 199
             N+ ST   + ++ + +K     L L+ +M  + RA      ++G   +LV TDIA+RG+D
Sbjct:   405 NSASTVNWLGYILDDHKIQH--LRLQGQMPASMRAGIFQSFQKGSQNILVCTDIASRGLD 462

Query:   200 LPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSE-ELFVLQRYE 253
                   + N+D P +  DY+HRAGR GR   S+   +V S +T   ++ ++Q+ E
Sbjct:   463 SVHVEVVINYDFPPTLQDYIHRAGRVGRVG-SEVPGSVISFVTHPWDVSLVQKIE 516

 Score = 51 (23.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
 Identities = 9/30 (30%), Positives = 19/30 (63%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G+L + ++  +  L+ +  +V+DEVD L +
Sbjct:   264 GALWKALKSQLISLQHLNFIVLDEVDTLLD 293


>ASPGD|ASPL0000006660 [details] [associations]
            symbol:AN5931 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
            EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
            ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
            EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
            OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
        Length = 563

 Score = 146 (56.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
 Identities = 28/68 (41%), Positives = 45/68 (66%)

Query:   177 LLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWT 236
             L E + G   ++V+TD+A+RGID+ + TH+ N+D P ++ DY+HR GRTGR   +  K T
Sbjct:   430 LNEFKTGKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGR---AGAKGT 486

Query:   237 VTSIITSE 244
               +  T++
Sbjct:   487 AITFFTTD 494

 Score = 46 (21.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
 Identities = 22/77 (28%), Positives = 31/77 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  ++E     L  V  LV+DE D + +                   +RQT   SA+ 
Sbjct:   272 GRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRP---DRQTCMWSATW 328

Query:    62 PQHRR-----FLHNCIQ 73
             P+  R     FL+N IQ
Sbjct:   329 PKEVRQLASDFLNNYIQ 345


>UNIPROTKB|J9PAF3 [details] [associations]
            symbol:J9PAF3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0004386 GeneTree:ENSGT00530000063236 EMBL:AAEX03004077
            Ensembl:ENSCAFT00000043955 OMA:IMKDIQR Uniprot:J9PAF3
        Length = 267

 Score = 147 (56.8 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 40/114 (35%), Positives = 55/114 (48%)

Query:   156 KGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSA 215
             K    V LL  EM    RAA +   R+G   +LV+T++ ARGID+ + + + NFDLP   
Sbjct:   143 KEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDK 202

Query:   216 ID------YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
                     YLHR GRTGR  F      V  + +   + +L R +     K E L
Sbjct:   203 DGNPDNETYLHRIGRTGR--FGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 254


>MGI|MGI:103064 [details] [associations]
            symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
            X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
            "RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
            catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
            of translation" evidence=IEA] [GO:0006915 "apoptotic process"
            evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
            [GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
            "RNA secondary structure unwinding" evidence=ISO] [GO:0016020
            "membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0031333 "negative regulation of protein complex assembly"
            evidence=ISO] [GO:0031369 "translation initiation factor binding"
            evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
            [GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
            "ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
            assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
            binding" evidence=ISO] [GO:0043065 "positive regulation of
            apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
            of apoptotic process" evidence=ISO] [GO:0043154 "negative
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
            of cysteine-type endopeptidase activity involved in apoptotic
            process" evidence=ISO] [GO:0045087 "innate immune response"
            evidence=ISO] [GO:0045727 "positive regulation of translation"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0045948
            "positive regulation of translational initiation" evidence=ISO]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=ISO]
            [GO:0071470 "cellular response to osmotic stress" evidence=ISO]
            [GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
            [GO:1900087 "positive regulation of G1/S transition of mitotic cell
            cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
            apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
            GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
            GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
            GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
            GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
            GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
            GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
            HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
            IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
            ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
            MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
            REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
            Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
            InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
            Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
        Length = 662

 Score = 154 (59.3 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 58/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   325 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 384

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   385 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATG 439

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S  ++FV     ++KK  ++     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   440 KDSLTLVFV-----ETKKGADS-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 485

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   486 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 534


>RGD|1564771 [details] [associations]
            symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
            PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
            Uniprot:D4ADE8
        Length = 662

 Score = 154 (59.3 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 58/229 (25%), Positives = 102/229 (44%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNN-RQTVFASAS 60
             G L  ++E+    L+  + LV+DE D + +                     R T+  SA+
Sbjct:   325 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSAT 384

Query:    61 IPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDA 120
              P+  + L      ++     + + V  +      +  + V   +  K   LL L+ +  
Sbjct:   385 FPKEIQMLARDFLDEY-----IFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATG 439

Query:   121 PES-GIIFVGEQSEKSKKAGNAPSTTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLL 178
              +S  ++FV     ++KK  ++     L DFL +  Y  +S    +  + +   R  +L 
Sbjct:   440 KDSLTLVFV-----ETKKGADS-----LEDFLYHEGYACTS----IHGDRSQRDREEALH 485

Query:   179 EVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             + R G   +LV+T +AARG+D+    H+ NFDLP    +Y+HR GRTGR
Sbjct:   486 QFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR 534


>UNIPROTKB|Q8JFP1 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
            KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
            EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
            ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
            Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
            KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
            ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
        Length = 407

 Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  L  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   281 NTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 340

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T E+  +L+  E       E
Sbjct:   341 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINFVTEEDKRILRDIETFYNTTVE 397

Query:   262 ELTL 265
             E+ +
Sbjct:   398 EMPM 401


>UNIPROTKB|Q3SZ65 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
            OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
            RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
            SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
            GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
            OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
        Length = 407

 Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  L  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   281 NTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 340

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T E+  +L+  E       E
Sbjct:   341 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINFVTEEDKRILRDIETFYNTTVE 397

Query:   262 ELTL 265
             E+ +
Sbjct:   398 EMPM 401


>UNIPROTKB|E2R3J1 [details] [associations]
            symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
            EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
            SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
            KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
        Length = 407

 Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  L  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   281 NTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 340

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T E+  +L+  E       E
Sbjct:   341 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINFVTEEDKRILRDIETFYNTTVE 397

Query:   262 ELTL 265
             E+ +
Sbjct:   398 EMPM 401


>UNIPROTKB|Q14240 [details] [associations]
            symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
            "helicase activity" evidence=TAS] [GO:0006446 "regulation of
            translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
            translation initiation factor 4F complex" evidence=TAS] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
            pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
            GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
            GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
            CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
            EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
            IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
            UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
            ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
            STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
            PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
            Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
            UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
            HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
            PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
            EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
            PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
            Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
        Length = 407

 Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  L  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   281 NTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 340

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T E+  +L+  E       E
Sbjct:   341 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINFVTEEDKRILRDIETFYNTTVE 397

Query:   262 ELTL 265
             E+ +
Sbjct:   398 EMPM 401


>UNIPROTKB|A6M930 [details] [associations]
            symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
            isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003743 "translation initiation factor activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
            EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
            ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
            Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
            Uniprot:A6M930
        Length = 407

 Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  L  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   281 NTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 340

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T E+  +L+  E       E
Sbjct:   341 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINFVTEEDKRILRDIETFYNTTVE 397

Query:   262 ELTL 265
             E+ +
Sbjct:   398 EMPM 401


>MGI|MGI:106906 [details] [associations]
            symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
            OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
            EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
            RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
            SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
            PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
            Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
            NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
            GermOnline:ENSMUSG00000022884 Uniprot:P10630
        Length = 407

 Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  L  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   281 NTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 340

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T E+  +L+  E       E
Sbjct:   341 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINFVTEEDKRILRDIETFYNTTVE 397

Query:   262 ELTL 265
             E+ +
Sbjct:   398 EMPM 401


>RGD|1309225 [details] [associations]
            symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
            species:10116 "Rattus norvegicus" [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
            KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
            RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
            SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
            World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
            UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
            ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
            GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
        Length = 407

 Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  L  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   281 NTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 340

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T E+  +L+  E       E
Sbjct:   341 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINFVTEEDKRILRDIETFYNTTVE 397

Query:   262 ELTL 265
             E+ +
Sbjct:   398 EMPM 401


>UNIPROTKB|Q9DGP9 [details] [associations]
            symbol:deadsouth "ATP-dependent RNA helicase DDX25"
            species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0003724 "RNA helicase activity" evidence=ISS]
            [GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] [GO:0016887 "ATPase activity"
            evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=IDA]
            [GO:0045495 "pole plasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0045495 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0032019 HSSP:Q9UHL0 HOVERGEN:HBG107989 CTD:29118
            EMBL:AF190623 RefSeq:NP_001082017.1 UniGene:Xl.670
            ProteinModelPortal:Q9DGP9 SMR:Q9DGP9 PRIDE:Q9DGP9 GeneID:398180
            KEGG:xla:398180 Xenbase:XB-GENE-958142 Uniprot:Q9DGP9
        Length = 483

 Score = 145 (56.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 42/127 (33%), Positives = 67/127 (52%)

Query:   144 TTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPE 202
             T  +  +LS         V LL  E+    RA  +   R+G   +LV+T++ ARGID+ +
Sbjct:   347 TRKIASWLSQKLSDDGHQVALLSGELPVYDRADMIQRFREGREKVLVTTNVCARGIDVEQ 406

Query:   203 TTHIYNFDLPRS---AID---YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENEL 256
              + + NFDLP +   ++D   YLHR GRTGR  F  +K    S+I +  +++L+  E+  
Sbjct:   407 VSIVVNFDLPVNVDGSVDFETYLHRIGRTGR--FG-KKGIAVSLIENFFVYMLKEIEDHF 463

Query:   257 KFKSEEL 263
               K  +L
Sbjct:   464 NTKITKL 470

 Score = 45 (20.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query:    12 IFKLESVQVLVIDEVDFLFN 31
             +  +E++ V V+DE D + N
Sbjct:   235 LITVENISVFVLDEADVMIN 254


>UNIPROTKB|F8WFX2 [details] [associations]
            symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
            OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
            Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
        Length = 408

 Score = 151 (58.2 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  L  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   282 NTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 341

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T E+  +L+  E       E
Sbjct:   342 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINFVTEEDKRILRDIETFYNTTVE 398

Query:   262 ELTL 265
             E+ +
Sbjct:   399 EMPM 402


>UNIPROTKB|J3QL17 [details] [associations]
            symbol:DDX25 "ATP-dependent RNA helicase DDX25"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
            ChiTaRS:DDX25 Ensembl:ENST00000530414 Uniprot:J3QL17
        Length = 468

 Score = 151 (58.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 51/162 (31%), Positives = 83/162 (51%)

Query:   100 FVICG-KKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGS 158
             +V+C  +K KYQ L ++  S      IIF   Q+ ++ K        L V+ + + ++  
Sbjct:   319 YVLCEHRKDKYQALCNIYGSITIGQAIIFC--QTRRNAK-------WLTVEMIQDGHQ-- 367

Query:   159 SDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAID- 217
               V LL  E+    RA+ +   R G   +L++T++ ARGID+ + T + NFDLP    + 
Sbjct:   368 --VSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEE 425

Query:   218 -----YLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYEN 254
                  YLHR GRTGR  F  +K    ++I  +EL  L + ++
Sbjct:   426 PDYETYLHRIGRTGR--FG-KKGLAFNMIEVDELPSLMKIQD 464

 Score = 37 (18.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query:    12 IFKLESVQVLVIDEVDFLFN 31
             +  L  ++V V+DE D + +
Sbjct:   238 LIDLTKIRVFVLDEADVMID 257


>UNIPROTKB|Q3SZ54 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
            IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
            ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
            Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
            InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
            NextBio:20866906 Uniprot:Q3SZ54
        Length = 406

 Score = 150 (57.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  +  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   280 NTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 339

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    +++T E+   L+  E       E
Sbjct:   340 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINMVTEEDKRTLRDIETFYNTSIE 396

Query:   262 ELTL 265
             E+ L
Sbjct:   397 EMPL 400

 Score = 36 (17.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 11/61 (18%), Positives = 25/61 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  ++ +     + +++ V+DE D + +                  +N Q V  SA++
Sbjct:   160 GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN---SNTQVVLLSATM 216

Query:    62 P 62
             P
Sbjct:   217 P 217


>UNIPROTKB|F1P895 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
            EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
            Uniprot:F1P895
        Length = 406

 Score = 150 (57.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  +  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   280 NTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 339

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    +++T E+   L+  E       E
Sbjct:   340 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINMVTEEDKRTLRDIETFYNTSIE 396

Query:   262 ELTL 265
             E+ L
Sbjct:   397 EMPL 400

 Score = 36 (17.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 11/61 (18%), Positives = 25/61 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  ++ +     + +++ V+DE D + +                  +N Q V  SA++
Sbjct:   160 GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN---SNTQVVLLSATM 216

Query:    62 P 62
             P
Sbjct:   217 P 217


>UNIPROTKB|J9NY67 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
            ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
            GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
        Length = 406

 Score = 150 (57.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  +  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   280 NTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 339

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    +++T E+   L+  E       E
Sbjct:   340 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINMVTEEDKRTLRDIETFYNTSIE 396

Query:   262 ELTL 265
             E+ L
Sbjct:   397 EMPL 400

 Score = 36 (17.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 11/61 (18%), Positives = 25/61 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  ++ +     + +++ V+DE D + +                  +N Q V  SA++
Sbjct:   160 GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN---SNTQVVLLSATM 216

Query:    62 P 62
             P
Sbjct:   217 P 217


>UNIPROTKB|P60842 [details] [associations]
            symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003743 "translation initiation factor
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
            "mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
            evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
            [GO:0008135 "translation factor activity, nucleic acid binding"
            evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
            4F complex" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
            process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
            pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
            Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
            Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
            Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
            GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
            GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
            HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
            OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
            EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
            EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
            RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
            PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
            ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
            MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
            PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
            Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
            GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
            neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
            EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
            ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
            Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
            Uniprot:P60842
        Length = 406

 Score = 150 (57.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  +  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   280 NTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 339

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    +++T E+   L+  E       E
Sbjct:   340 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINMVTEEDKRTLRDIETFYNTSIE 396

Query:   262 ELTL 265
             E+ L
Sbjct:   397 EMPL 400

 Score = 36 (17.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 11/61 (18%), Positives = 25/61 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  ++ +     + +++ V+DE D + +                  +N Q V  SA++
Sbjct:   160 GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN---SNTQVVLLSATM 216

Query:    62 P 62
             P
Sbjct:   217 P 217


>UNIPROTKB|A6M928 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
            UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
            Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
            Uniprot:A6M928
        Length = 406

 Score = 150 (57.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  +  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   280 NTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 339

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    +++T E+   L+  E       E
Sbjct:   340 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINMVTEEDKRTLRDIETFYNTSIE 396

Query:   262 ELTL 265
             E+ L
Sbjct:   397 EMPL 400

 Score = 36 (17.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 11/61 (18%), Positives = 25/61 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  ++ +     + +++ V+DE D + +                  +N Q V  SA++
Sbjct:   160 GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN---SNTQVVLLSATM 216

Query:    62 P 62
             P
Sbjct:   217 P 217


>MGI|MGI:95303 [details] [associations]
            symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
            initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
            KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
            EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
            EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
            PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
            UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
            MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
            REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
            Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
            InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
            Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
        Length = 406

 Score = 150 (57.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  +  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   280 NTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 339

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    +++T E+   L+  E       E
Sbjct:   340 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINMVTEEDKRTLRDIETFYNTSIE 396

Query:   262 ELTL 265
             E+ L
Sbjct:   397 EMPL 400

 Score = 36 (17.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 11/61 (18%), Positives = 25/61 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  ++ +     + +++ V+DE D + +                  +N Q V  SA++
Sbjct:   160 GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN---SNTQVVLLSATM 216

Query:    62 P 62
             P
Sbjct:   217 P 217


>UNIPROTKB|Q6P3V8 [details] [associations]
            symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
            norvegicus" [GO:0003743 "translation initiation factor activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
            GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
            GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
            OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
            UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
            Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
            InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
            Uniprot:Q6P3V8
        Length = 406

 Score = 150 (57.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  +  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   280 NTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 339

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    +++T E+   L+  E       E
Sbjct:   340 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINMVTEEDKRTLRDIETFYNTSIE 396

Query:   262 ELTL 265
             E+ L
Sbjct:   397 EMPL 400

 Score = 36 (17.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
 Identities = 11/61 (18%), Positives = 25/61 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  ++ +     + +++ V+DE D + +                  +N Q V  SA++
Sbjct:   160 GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN---SNTQVVLLSATM 216

Query:    62 P 62
             P
Sbjct:   217 P 217


>CGD|CAL0004832 [details] [associations]
            symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
            "cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
            ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
            KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
        Length = 672

 Score = 154 (59.3 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 42/148 (28%), Positives = 70/148 (47%)

Query:    80 DVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAG 139
             D V + V  +      +  + +      K   +L L+ ++  E+G+  V   +E  + A 
Sbjct:   402 DYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDLLSAN--ENGLTIVF--TETKRMAD 457

Query:   140 NAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGID 199
             N      L D+L   Y        +  + +   R  +L   + G   +LV+T +AARG+D
Sbjct:   458 N------LADYL---YDQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLD 508

Query:   200 LPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             +P  +H+ N+DLP    DY+HR GRTGR
Sbjct:   509 IPNVSHVINYDLPSDIDDYVHRIGRTGR 536


>ASPGD|ASPL0000059362 [details] [associations]
            symbol:AN0637 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001308
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K14807 HOGENOM:HOG000203294 EMBL:AACD01000008 RefSeq:XP_658241.1
            ProteinModelPortal:Q5BFP3 EnsemblFungi:CADANIAT00002039
            GeneID:2876415 KEGG:ani:AN0637.2 OMA:KQAREAC OrthoDB:EOG4CRQ7F
            Uniprot:Q5BFP3
        Length = 853

 Score = 148 (57.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
 Identities = 32/105 (30%), Positives = 56/105 (53%)

Query:   135 SKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIA 194
             +K + +A   + L+  L+ S  G    ++   + + + +  S    RQG   ++++TD A
Sbjct:   688 TKSSESASRLSRLLALLNPSISGLIGTIVKSNKSSASRKTLSAY--RQGKISIIIATDRA 745

Query:   195 ARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTS 239
             +RG+DL   TH+ N+D+P S   Y+HR GRT R       WT+ +
Sbjct:   746 SRGLDLQSLTHVINYDVPASITTYVHRVGRTARAGNEGSAWTLVA 790

 Score = 48 (22.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query:    13 FKLESVQVLVIDEVDFLFN 31
             F L+ +Q LVIDE D L N
Sbjct:   447 FTLKHLQWLVIDEADRLLN 465


>UNIPROTKB|I3LB32 [details] [associations]
            symbol:DDX28 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:RARRDHF GeneTree:ENSGT00670000098028 EMBL:FP565347
            RefSeq:XP_003355824.1 Ensembl:ENSSSCT00000027762 GeneID:100621490
            KEGG:ssc:100621490 Uniprot:I3LB32
        Length = 540

 Score = 142 (55.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
 Identities = 37/115 (32%), Positives = 63/115 (54%)

Query:   140 NAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGID 199
             N+ ST   + ++ + +K     L L+ +M  + RA      ++G   +L+ TDIA+RG+D
Sbjct:   405 NSSSTVNWLGYILDDHKIQH--LRLQGQMPASMRAGIFQSFQRGSQDILLCTDIASRGLD 462

Query:   200 LPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSE-ELFVLQRYE 253
               +   + N+D P +  DY+HRAGR GR   S    TV S +T   ++ ++Q+ E
Sbjct:   463 STQVELVINYDFPLTLQDYIHRAGRVGRVG-SKVPGTVISFVTHPWDVSLVQKIE 516

 Score = 50 (22.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G+L + ++  +  LE +  LV+DE D L +
Sbjct:   264 GALWKGLKSQLISLEQLSFLVLDEADTLLD 293


>TAIR|locus:2173517 [details] [associations]
            symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
            "pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
            EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
            IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
            ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
            PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
            KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
            PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
            GermOnline:AT5G60990 Uniprot:Q8GY84
        Length = 456

 Score = 136 (52.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
 Identities = 24/61 (39%), Positives = 40/61 (65%)

Query:   167 EMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTG 226
             +M  + R  +L + + G   +LV TD+A+RG+D+P    + N+D+P ++ DY+HR GRT 
Sbjct:   293 QMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTA 352

Query:   227 R 227
             R
Sbjct:   353 R 353

 Score = 55 (24.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
 Identities = 31/116 (26%), Positives = 47/116 (40%)

Query:    13 FKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASIPQHRRFLHNCI 72
             F L+S++ LV+DE D L N                    R+T   SA++ +  R L    
Sbjct:   160 FSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPL---ERKTFLFSATMTKKVRKLQRAC 216

Query:    73 QQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPES-GIIF 127
              +   K +    + + +  L     +RFV    K  Y   L  I S+ PES  +IF
Sbjct:   217 LRNPVKIEAASKY-STVDTLKQ--QYRFVAAKYKDCY---LVYILSEMPESTSMIF 266


>UNIPROTKB|J9NU36 [details] [associations]
            symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
            EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
        Length = 423

 Score = 150 (57.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  +  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   297 NTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQ 356

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    +++T E+   L+  E       E
Sbjct:   357 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINMVTEEDKRTLRDIETFYNTSIE 413

Query:   262 ELTL 265
             E+ L
Sbjct:   414 EMPL 417

 Score = 36 (17.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
 Identities = 11/61 (18%), Positives = 25/61 (40%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  ++ +     + +++ V+DE D + +                  +N Q V  SA++
Sbjct:   177 GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN---SNTQVVLLSATM 233

Query:    62 P 62
             P
Sbjct:   234 P 234


>POMBASE|SPAC1006.07 [details] [associations]
            symbol:SPAC1006.07 "translation initiation factor eIF4A
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
            "cytoplasmic translational initiation" evidence=NAS] [GO:0003743
            "translation initiation factor activity" evidence=ISO] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
            "ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
            "eukaryotic translation initiation factor 4F complex" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
            EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
            ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
            EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
            OMA:PILEMED NextBio:20803983 Uniprot:P47943
        Length = 392

 Score = 141 (54.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
 Identities = 35/124 (28%), Positives = 66/124 (53%)

Query:   143 STTLLVDFLSNSY-KGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+    +    V  +  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   266 NTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQ 325

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T++++ +++  E       E
Sbjct:   326 QVSLVINYDLPANRENYIHRIGRGGR--FG-RKGVSINFVTNDDVRMMREIEQFYNTHIE 382

Query:   262 ELTL 265
             E+ +
Sbjct:   383 EMPM 386

 Score = 46 (21.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
 Identities = 8/26 (30%), Positives = 16/26 (61%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +  +I++     ++VQ+ V+DE D
Sbjct:   146 GRVHDMIQRRALPTDAVQMFVLDEAD 171


>UNIPROTKB|Q5ZKB9 [details] [associations]
            symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000932 "cytoplasmic
            mRNA processing body" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
            evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
            assembly" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962 GO:GO:0008026
            eggNOG:COG0513 GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797
            OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 HSSP:P26196
            EMBL:AJ720165 IPI:IPI00595692 UniGene:Gga.2331
            ProteinModelPortal:Q5ZKB9 SMR:Q5ZKB9 Ensembl:ENSGALT00000012405
            HOVERGEN:HBG106685 InParanoid:Q5ZKB9 OrthoDB:EOG4J1182
            ArrayExpress:Q5ZKB9 Uniprot:Q5ZKB9
        Length = 483

 Score = 119 (46.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
 Identities = 28/69 (40%), Positives = 40/69 (57%)

Query:   188 LVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELF 247
             LV TD+  RGID+     + NFD P+ A  YLHR GR+GR  F      + ++IT ++ F
Sbjct:   388 LVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGR--FGHLGLAI-NLITYDDRF 444

Query:   248 VLQRYENEL 256
              L+  E +L
Sbjct:   445 NLKSIEEQL 453

 Score = 75 (31.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
 Identities = 21/76 (27%), Positives = 39/76 (51%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  LI+K + K+E VQ++V+DE D L +                   NRQ +  SA+ 
Sbjct:   224 GRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLP---KNRQILLYSATF 280

Query:    62 PQH-RRFLHNCIQQKW 76
             P   ++F+++ +Q+ +
Sbjct:   281 PLSVQKFMNSHLQKPY 296


>ZFIN|ZDB-GENE-061013-64 [details] [associations]
            symbol:ddx28 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            28" species:7955 "Danio rerio" [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-061013-64 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 CTD:55794
            HOGENOM:HOG000008689 HOVERGEN:HBG081424 OrthoDB:EOG42RD7H
            EMBL:BC124668 IPI:IPI00805270 RefSeq:NP_001070800.1
            UniGene:Dr.84136 ProteinModelPortal:Q08BL1 GeneID:768189
            KEGG:dre:768189 InParanoid:Q08BL1 NextBio:20918504
            ArrayExpress:Q08BL1 Uniprot:Q08BL1
        Length = 558

 Score = 139 (54.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
 Identities = 36/105 (34%), Positives = 56/105 (53%)

Query:   164 LEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAG 223
             L+ EM    R     + ++G   +LV TDIA+RG+D      I N+D P S  DY+HRAG
Sbjct:   441 LQGEMPAAMREGVFRDFQRGKTNVLVCTDIASRGLDTQRVGLIVNYDFPESQTDYIHRAG 500

Query:   224 RTGRKPFSDEKWTVTSIITSE-ELFVLQRYENELKFKSEELTLQT 267
             R GR   S E   V S +T   ++ ++Q+ E   + ++    ++T
Sbjct:   501 RVGRAGGS-EGGEVLSFVTQPWDVELVQKIETAARRRTSLPGMET 544

 Score = 53 (23.7 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFN 31
             G+L + + K    L  +  LVIDE D +F+
Sbjct:   284 GALLKALWKRFISLSELYFLVIDEADTMFD 313

 Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query:    78 KSDVVHVHVNAIKPLPSCLHHRFVIC------GKKMKYQTLLSLI 116
             + +++H     ++ +P  L  R ++C      GK + Y  LL +I
Sbjct:   168 RQNIIHPTTVQLQTIPKILKGRNILCAAETGSGKTLTY--LLPII 210


>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
            symbol:eif4a2 "eukaryotic translation initiation
            factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0006413
            "translational initiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
            EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
            ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
            ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
        Length = 411

 Score = 150 (57.9 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%)

Query:   143 STTLLVDFLSNSYKGSS-DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD+L+         V  L  +M+   R   + E R G   +L++TD+ ARGID+ 
Sbjct:   285 NTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVLITTDLLARGIDVQ 344

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR GR  F   K    + +T E+  +L+  E       E
Sbjct:   345 QVSLVINYDLPTNRENYIHRIGRGGR--FG-RKGVAINFVTEEDKRILRDIETFYNTTVE 401

Query:   262 ELTL 265
             E+ +
Sbjct:   402 EMPM 405


>UNIPROTKB|Q9Y6V7 [details] [associations]
            symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
            HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
            RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
            SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
            DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
            Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
            CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
            PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
            PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
            Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
            GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
        Length = 483

 Score = 151 (58.2 bits), Expect = 2.9e-08, P = 2.9e-08
 Identities = 60/262 (22%), Positives = 113/262 (43%)

Query:     7 LIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASIPQHRR 66
             L   + F ++ ++ LV+DE D L                      RQT+  SA++    R
Sbjct:   135 LRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLR 194

Query:    67 FLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQ--SDAPESG 124
              L      +    +     V+ ++ L      R+++  +K+K   L+ LIQ   D  E  
Sbjct:   195 ELQGLATNQPFFWEA-QAPVSTVEQLDQ----RYLLVPEKVKDAYLVHLIQRFQDEHEDW 249

Query:   125 IIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGG 184
              I +   + K+ +        +L   L    K S   + L   M    R A+L + +   
Sbjct:   250 SIIIFTNTCKTCQ--------ILCMMLR---KFSFPTVALHSMMKQKERFAALAKFKSSI 298

Query:   185 GYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSE 244
               +L++TD+A+RG+D+P    + N + P     Y+HR GRT R   +  +    +++T  
Sbjct:   299 YRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTAR---AGRQGQAITLVTQY 355

Query:   245 ELFVLQRYENELKFKSEELTLQ 266
             ++ ++   E ++K K EE +++
Sbjct:   356 DIHLVHAIEEQIKKKLEEFSVE 377


>TAIR|locus:2032910 [details] [associations]
            symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
            development" evidence=IMP] [GO:0009791 "post-embryonic development"
            evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
            evidence=IMP] [GO:0006606 "protein import into nucleus"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
            GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
            HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
            PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
            ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
            EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
            KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
            InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
            Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
        Length = 491

 Score = 151 (58.2 bits), Expect = 3.0e-08, P = 3.0e-08
 Identities = 33/95 (34%), Positives = 56/95 (58%)

Query:   168 MNFNS-RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTG 226
             +N  S R ++L + + G   +L++TD+A+RG+D+P    + N+D+PR   DY+HR GRT 
Sbjct:   335 LNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTA 394

Query:   227 RKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             R   +       SIIT  ++ ++ + E E+  K E
Sbjct:   395 R---AGRGGLAVSIITETDVKLIHKIEEEVGKKME 426


>UNIPROTKB|E2RC35 [details] [associations]
            symbol:DDX10 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
            InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000074980
            CTD:1662 OMA:ADKVIEP EMBL:AAEX03003508 RefSeq:XP_536583.2
            Ensembl:ENSCAFT00000022758 GeneID:479448 KEGG:cfa:479448
            Uniprot:E2RC35
        Length = 871

 Score = 154 (59.3 bits), Expect = 3.0e-08, P = 3.0e-08
 Identities = 51/200 (25%), Positives = 84/200 (42%)

Query:    52 RQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQT 111
             RQT+  SA+     + + +  +      + + VH  A    P+ L   +++C  + K   
Sbjct:   247 RQTLLFSAT---QTKSVKDLARLSLKNPEYIWVHEKAKYSTPATLEQNYIVCELQQKISV 303

Query:   112 LLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFN 171
             L S ++S   +  I+F     E             L         G S +L L       
Sbjct:   304 LYSFLRSHLKKKSIVFFSSCKE----------VQYLYRVFCRLRPGIS-ILALHGRQQQM 352

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
              R     E  +    +L +TDIAARG+D P    +  FD P  A  Y+HRAGRT R  + 
Sbjct:   353 RRMEVYNEFVRKRSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR--YK 410

Query:   232 DEKWTVTSIITSEELFVLQR 251
             ++   +  ++ SEE  ++Q+
Sbjct:   411 EDGEALLILLPSEEKGMVQQ 430


>RGD|1308990 [details] [associations]
            symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1308990
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
            GeneTree:ENSGT00550000074980 CTD:1662 OrthoDB:EOG4BK536 OMA:ADKVIEP
            IPI:IPI00869603 RefSeq:NP_001100290.1 UniGene:Rn.99481
            Ensembl:ENSRNOT00000017683 GeneID:300710 KEGG:rno:300710
            UCSC:RGD:1308990 NextBio:647348 Uniprot:D3ZBY5
        Length = 874

 Score = 154 (59.3 bits), Expect = 3.0e-08, P = 3.0e-08
 Identities = 53/200 (26%), Positives = 83/200 (41%)

Query:    52 RQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQT 111
             RQT+  SA+     + + +  +      + V VH  A    P+ L   ++IC    K   
Sbjct:   247 RQTLLFSAT---QTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQKISV 303

Query:   112 LLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFN 171
             L S ++S   +  I+F     E             L         G S +L L       
Sbjct:   304 LFSFLRSHLTKKSIVFFSSCKE----------VQYLYRVFCRLRPGIS-ILALHGRQQQM 352

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
              R     E  +    +L +TDIAARG+D P    +  FD P  A  Y+HRAGRT R  + 
Sbjct:   353 RRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR--YK 410

Query:   232 DEKWTVTSIITSEELFVLQR 251
             ++   +  ++ SEE  ++Q+
Sbjct:   411 EDGEALLILLPSEEQGMVQQ 430


>MGI|MGI:1924841 [details] [associations]
            symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1924841 GO:GO:0005524
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
            GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
            OrthoDB:EOG4BK536 OMA:ADKVIEP ChiTaRS:DDX10 EMBL:BC049261
            IPI:IPI00896604 RefSeq:NP_084212.2 UniGene:Mm.133560
            ProteinModelPortal:Q80Y44 SMR:Q80Y44 STRING:Q80Y44
            PhosphoSite:Q80Y44 PaxDb:Q80Y44 PRIDE:Q80Y44
            Ensembl:ENSMUST00000065630 GeneID:77591 KEGG:mmu:77591
            UCSC:uc009plz.2 InParanoid:Q80Y44 NextBio:347162 Bgee:Q80Y44
            CleanEx:MM_DDX10 Genevestigator:Q80Y44
            GermOnline:ENSMUSG00000053289 Uniprot:Q80Y44
        Length = 875

 Score = 154 (59.3 bits), Expect = 3.0e-08, P = 3.0e-08
 Identities = 53/200 (26%), Positives = 83/200 (41%)

Query:    52 RQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQT 111
             RQT+  SA+     + + +  +      + V VH  A    P+ L   ++IC    K   
Sbjct:   247 RQTLLFSAT---QTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQKISV 303

Query:   112 LLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFN 171
             L S ++S   +  I+F     E             L         G S +L L       
Sbjct:   304 LFSFLRSHLKKKSIVFFSSCKE----------VQYLYRVFCRLRPGIS-ILALHGRQQQM 352

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
              R     E  +    +L +TDIAARG+D P    +  FD P  A  Y+HRAGRT R  + 
Sbjct:   353 RRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR--YK 410

Query:   232 DEKWTVTSIITSEELFVLQR 251
             ++   +  ++ SEE  ++Q+
Sbjct:   411 EDGEALLILLPSEEQGMVQQ 430


>TIGR_CMR|SO_4034 [details] [associations]
            symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
            acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
            Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
            ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
            PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
        Length = 623

 Score = 152 (58.6 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 46/174 (26%), Positives = 83/174 (47%)

Query:    80 DVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAG 139
             +  ++ + A       +  RFV   +  K + L+ +++ +  E  IIFV  ++       
Sbjct:   203 NATNISIAASHTTVDSIEQRFVQVSQHNKLEALVRVLEVENTEGIIIFVRTRN------- 255

Query:   140 NAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGID 199
                S   L + L      SS    L  +MN  +R  ++ +++ G   +L++TD+AARG+D
Sbjct:   256 ---SCVELAEKLEARGYASSP---LHGDMNQQARERAVEQLKNGKLDILIATDVAARGLD 309

Query:   200 LPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYE 253
             +    H+ N+D+P     Y+HR GRTGR   +         +TS E+ +L+  E
Sbjct:   310 VERIGHVVNYDIPYDTEAYVHRIGRTGR---AGRTGMAILFVTSREMRMLRTIE 360


>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
            symbol:PF14_0655 "RNA helicase-1, putative"
            species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
            evidence=ISS] [GO:0003743 "translation initiation factor activity"
            evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
            [GO:0006446 "regulation of translational initiation" evidence=ISS]
            [GO:0016281 "eukaryotic translation initiation factor 4F complex"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
            GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
            RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
            IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
            GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
            ProtClustDB:PTZ00424 Uniprot:Q8IKF0
        Length = 398

 Score = 146 (56.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
 Identities = 40/127 (31%), Positives = 67/127 (52%)

Query:   143 STTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD L+   +     V  +  +M+   R   + E R G   +LV+TD+ ARGID+ 
Sbjct:   270 NTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQ 329

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSE--ELFVLQRYENELKFK 259
             + + + N+DLP S   Y+HR GR+GR  F   K    + +T++  E   L++ E+    +
Sbjct:   330 QVSLVINYDLPASPDTYIHRIGRSGR--FG-RKGVAINFVTNDDKEKDKLKKIESYYSTQ 386

Query:   260 SEELTLQ 266
              EE+ L+
Sbjct:   387 IEEMPLE 393

 Score = 39 (18.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
 Identities = 6/26 (23%), Positives = 16/26 (61%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +  +I+K    ++ +++ ++DE D
Sbjct:   150 GRVYDMIDKRHLGVDRLKLFILDEAD 175


>UNIPROTKB|Q8IKF0 [details] [associations]
            symbol:H45 "Helicase 45" species:36329 "Plasmodium
            falciparum 3D7" [GO:0006446 "regulation of translational
            initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
            GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
            GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
            RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
            IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
            GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
            ProtClustDB:PTZ00424 Uniprot:Q8IKF0
        Length = 398

 Score = 146 (56.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
 Identities = 40/127 (31%), Positives = 67/127 (52%)

Query:   143 STTLLVDFLSNS-YKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD L+   +     V  +  +M+   R   + E R G   +LV+TD+ ARGID+ 
Sbjct:   270 NTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQ 329

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSE--ELFVLQRYENELKFK 259
             + + + N+DLP S   Y+HR GR+GR  F   K    + +T++  E   L++ E+    +
Sbjct:   330 QVSLVINYDLPASPDTYIHRIGRSGR--FG-RKGVAINFVTNDDKEKDKLKKIESYYSTQ 386

Query:   260 SEELTLQ 266
              EE+ L+
Sbjct:   387 IEEMPLE 393

 Score = 39 (18.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
 Identities = 6/26 (23%), Positives = 16/26 (61%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +  +I+K    ++ +++ ++DE D
Sbjct:   150 GRVYDMIDKRHLGVDRLKLFILDEAD 175


>WB|WBGene00008119 [details] [associations]
            symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
            OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
            ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
            EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
            UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
            NextBio:888300 Uniprot:Q93382
        Length = 811

 Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 35/104 (33%), Positives = 62/104 (59%)

Query:   160 DVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYL 219
             D++LL  +M    R  +LL+ R+    +LV+TD+AARG+D+ E   + NFD+ R    ++
Sbjct:   537 DIVLLHGDMLQAERNENLLKFRKKS-QILVATDVAARGLDISEIRTVINFDMARDIDTHV 595

Query:   220 HRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSEEL 263
             HR GRTGR   +  K T  +++T +++ ++      L+  S+E+
Sbjct:   596 HRIGRTGR---AGHKGTAYTLVTEKDIEMVGHLVKNLESVSQEV 636


>RGD|1559513 [details] [associations]
            symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
            SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
            IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
            NextBio:667517 Uniprot:D4ADJ9
        Length = 621

 Score = 135 (52.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R  ++   R+G   +LV+TD+A++G+D P   H+ N+D+P    +Y+HR GRTGR
Sbjct:   470 RTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGR 524

 Score = 58 (25.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 29/132 (21%), Positives = 52/132 (39%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L++K +  L+  + L +DE D + +                    RQT+  SA++
Sbjct:   321 GRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK---GQRQTLLFSATM 377

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+    + N  +    K   ++V       L       +V    KM Y  LL  +Q   P
Sbjct:   378 PKK---IQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVY--LLECLQKTPP 432

Query:   122 ESGIIFVGEQSE 133
                +IF  ++++
Sbjct:   433 PV-LIFAKKKAD 443


>UNIPROTKB|A4RN46 [details] [associations]
            symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
            PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
            "mycelium development" evidence=IEP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
            GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
            ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
            KEGG:mgr:MGG_15532 Uniprot:A4RN46
        Length = 1012

 Score = 154 (59.3 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 54/199 (27%), Positives = 101/199 (50%)

Query:    51 NRQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQ 110
             +RQTV  SA++P+    + + + +K  K+ V  + V     + S +     I  +K K+ 
Sbjct:   559 DRQTVLFSATMPK----IMDALVKKVLKNPV-EIEVGGKSVVASEITQIVEIRDEKSKFN 613

Query:   111 TLLSLI----QSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEE 166
              LL L+    + D     +IFV E+ EK+ +        LL + L   Y G   +   ++
Sbjct:   614 RLLELLGELYKDDDDVRSLIFV-ERQEKADE--------LLRELLRKGY-GCMSLHGGKD 663

Query:   167 EMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTG 226
             +++   R +++ + + G   ++++T +AARG+D+ +   + N+D P    DY+HRAGRTG
Sbjct:   664 QVD---RDSTISDFKSGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTG 720

Query:   227 RKPFSDEKWTVTSIITSEE 245
             R   +    T  + +T E+
Sbjct:   721 R---AGNTGTAVTFVTEEQ 736


>UNIPROTKB|A3KN07 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0035458 "cellular response to
            interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
            KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
            RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
            Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
            InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
        Length = 622

 Score = 135 (52.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R  ++   R+G   +LV+TD+A++G+D P   H+ N+D+P    +Y+HR GRTGR
Sbjct:   471 RTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGR 525

 Score = 58 (25.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 29/132 (21%), Positives = 52/132 (39%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L++K +  L+  + L +DE D + +                    RQT+  SA++
Sbjct:   322 GRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK---GQRQTLLFSATM 378

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+    + N  +    K   ++V       L       +V    KM Y  LL  +Q   P
Sbjct:   379 PKK---IQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVY--LLECLQKTPP 433

Query:   122 ESGIIFVGEQSE 133
                +IF  ++++
Sbjct:   434 PV-LIFAEKKAD 444


>UNIPROTKB|E2R052 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
            response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
            RefSeq:XP_536417.2 ProteinModelPortal:E2R052
            Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
            NextBio:20854482 Uniprot:E2R052
        Length = 622

 Score = 135 (52.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R  ++   R+G   +LV+TD+A++G+D P   H+ N+D+P    +Y+HR GRTGR
Sbjct:   471 RTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGR 525

 Score = 58 (25.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 29/132 (21%), Positives = 52/132 (39%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L++K +  L+  + L +DE D + +                    RQT+  SA++
Sbjct:   322 GRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK---GQRQTLLFSATM 378

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+    + N  +    K   ++V       L       +V    KM Y  LL  +Q   P
Sbjct:   379 PKK---IQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVY--LLECLQKTPP 433

Query:   122 ESGIIFVGEQSE 133
                +IF  ++++
Sbjct:   434 PV-LIFAEKKAD 444


>UNIPROTKB|Q9UJV9 [details] [associations]
            symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
            "cellular response to interferon-beta" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0051607 "defense response to virus"
            evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0007275 "multicellular organismal development"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
            GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
            EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
            EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
            UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
            SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
            PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
            PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
            KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
            HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
            PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
            OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
            EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
            ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
            Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
        Length = 622

 Score = 135 (52.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R  ++   R+G   +LV+TD+A++G+D P   H+ N+D+P    +Y+HR GRTGR
Sbjct:   471 RTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGR 525

 Score = 58 (25.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 29/132 (21%), Positives = 52/132 (39%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L++K +  L+  + L +DE D + +                    RQT+  SA++
Sbjct:   322 GRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK---GQRQTLLFSATM 378

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+    + N  +    K   ++V       L       +V    KM Y  LL  +Q   P
Sbjct:   379 PKK---IQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVY--LLECLQKTPP 433

Query:   122 ESGIIFVGEQSE 133
                +IF  ++++
Sbjct:   434 PV-LIFAEKKAD 444


>MGI|MGI:1920185 [details] [associations]
            symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0035458 "cellular response to
            interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
            response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
            spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
            GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
            KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
            RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
            SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
            PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
            KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
            CleanEx:MM_DDX41 Genevestigator:Q91VN6
            GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
        Length = 622

 Score = 135 (52.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R  ++   R+G   +LV+TD+A++G+D P   H+ N+D+P    +Y+HR GRTGR
Sbjct:   471 RTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGR 525

 Score = 58 (25.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 29/132 (21%), Positives = 52/132 (39%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L++K +  L+  + L +DE D + +                    RQT+  SA++
Sbjct:   322 GRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK---GQRQTLLFSATM 378

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+    + N  +    K   ++V       L       +V    KM Y  LL  +Q   P
Sbjct:   379 PKK---IQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVY--LLECLQKTPP 433

Query:   122 ESGIIFVGEQSE 133
                +IF  ++++
Sbjct:   434 PV-LIFAEKKAD 444


>RGD|1311758 [details] [associations]
            symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
            evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
            "defense response to virus" evidence=IEA;ISO] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
            RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
            Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
            UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
            Uniprot:B2RYL8
        Length = 622

 Score = 135 (52.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R  ++   R+G   +LV+TD+A++G+D P   H+ N+D+P    +Y+HR GRTGR
Sbjct:   471 RTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGR 525

 Score = 58 (25.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 29/132 (21%), Positives = 52/132 (39%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L++K +  L+  + L +DE D + +                    RQT+  SA++
Sbjct:   322 GRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK---GQRQTLLFSATM 378

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+    + N  +    K   ++V       L       +V    KM Y  LL  +Q   P
Sbjct:   379 PKK---IQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVY--LLECLQKTPP 433

Query:   122 ESGIIFVGEQSE 133
                +IF  ++++
Sbjct:   434 PV-LIFAEKKAD 444


>UNIPROTKB|E2R316 [details] [associations]
            symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
            Pfam:PF13959 Ensembl:ENSCAFT00000035837 Uniprot:E2R316
        Length = 483

 Score = 150 (57.9 bits), Expect = 3.8e-08, P = 3.8e-08
 Identities = 62/257 (24%), Positives = 110/257 (42%)

Query:    15 LESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASIPQHRRFLHNCIQQ 74
             ++S++VLV+DE D L +                    R+T   SA+  Q    L     +
Sbjct:   162 VKSLEVLVLDEADRLLDMGFEASINTILEFLP---KQRRTGLFSATQTQEVESLVRAGLR 218

Query:    75 KWTKSDVVH--VHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQS 132
                +  V    V  ++ +  PS L + +++C    K+  L+  +++   E  +IF     
Sbjct:   219 NPVRISVKEKGVAASSTQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLIFF---- 274

Query:   133 EKSKKAGNAPSTTLLVDFLSNSYKG---SSDVLLLEEEMNFNSRAASLLEVRQGGGYLLV 189
                       ST   V++   + +    S  ++ +  +M  + R    +E R+    +LV
Sbjct:   275 ----------STCACVEYYGKALEALVKSVKIMCIHGKMK-HKRNKIFMEFRKLQSGILV 323

Query:   190 STDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVL 249
              TD+ ARGID+PE   +  +D P SA  ++HR GRT R         +  ++  EE +V 
Sbjct:   324 CTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGS--ALVFLLPMEESYVT 381

Query:   250 QRYENELKFKSEELTLQ 266
                 N+ K   +E+ LQ
Sbjct:   382 FLEINQ-KCPLQEMKLQ 397


>UNIPROTKB|F1S7D9 [details] [associations]
            symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
            GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
            RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
            GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
        Length = 483

 Score = 150 (57.9 bits), Expect = 3.8e-08, P = 3.8e-08
 Identities = 60/262 (22%), Positives = 113/262 (43%)

Query:     7 LIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASIPQHRR 66
             L   + F ++ ++ LV+DE D L                      RQT+  SA++    R
Sbjct:   135 LRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLR 194

Query:    67 FLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQS--DAPESG 124
              L    Q   T           ++ +   L  R+++  +K+K   L+ LIQ+  D  E  
Sbjct:   195 EL----QSLATNQPFFWEAQAPVRTVEQ-LDQRYLLVPEKVKDAYLVHLIQNFQDEHEDW 249

Query:   125 IIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGG 184
              I +   + K+ +        +L   L    K +   + L   M    R A+L + +   
Sbjct:   250 SIIIFTNTCKTCQ--------ILCMMLR---KFNFPTVALHSMMKQKERFAALAKFKSSI 298

Query:   185 GYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSE 244
               +L++TD+A+RG+D+P    + N + P     Y+HR GRT R   +  +    +++T  
Sbjct:   299 YRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTAR---AGRQGQAITLVTQY 355

Query:   245 ELFVLQRYENELKFKSEELTLQ 266
             ++ ++   E ++K K EE +++
Sbjct:   356 DIHLVHAIEEQIKKKLEEFSVE 377


>WB|WBGene00012059 [details] [associations]
            symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
            evidence=IMP] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
            GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
            OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
            ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
            EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
            UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
            NextBio:892086 Uniprot:P34580
        Length = 489

 Score = 150 (57.9 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 46/183 (25%), Positives = 79/183 (43%)

Query:    80 DVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQSEKSKKAG 139
             D   V V++       L   ++    K K   L+ L+   A  S I+F            
Sbjct:   242 DPARVSVSSRYKTVDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCA---------- 291

Query:   140 NAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGID 199
                +TT+ +  +          + L  +M+   R  SL + +     +LV TD+AARG+D
Sbjct:   292 -TCATTMQIAVMLRQL--GMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLD 348

Query:   200 LPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFK 259
             +P    + N+D+P  + DY+HR GRT R   +       +++T  ++   Q+ E  L  K
Sbjct:   349 IPHVDMVINYDMPSQSKDYVHRVGRTAR---AGRSGIAITVVTQYDVEAYQKIEANLGKK 405

Query:   260 SEE 262
              +E
Sbjct:   406 LDE 408


>UNIPROTKB|J3KNN5 [details] [associations]
            symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
            GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
            Ensembl:ENST00000330503 Uniprot:J3KNN5
        Length = 640

 Score = 135 (52.6 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R  ++   R+G   +LV+TD+A++G+D P   H+ N+D+P    +Y+HR GRTGR
Sbjct:   489 RTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGR 543

 Score = 58 (25.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
 Identities = 29/132 (21%), Positives = 52/132 (39%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L++K +  L+  + L +DE D + +                    RQT+  SA++
Sbjct:   340 GRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK---GQRQTLLFSATM 396

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+    + N  +    K   ++V       L       +V    KM Y  LL  +Q   P
Sbjct:   397 PKK---IQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVY--LLECLQKTPP 451

Query:   122 ESGIIFVGEQSE 133
                +IF  ++++
Sbjct:   452 PV-LIFAEKKAD 462


>UNIPROTKB|Q08DT0 [details] [associations]
            symbol:DDX10 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
            InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
            GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
            OrthoDB:EOG4BK536 OMA:ADKVIEP EMBL:DAAA02040206 EMBL:DAAA02040207
            EMBL:DAAA02040208 EMBL:DAAA02040209 EMBL:DAAA02040210
            EMBL:DAAA02040211 EMBL:DAAA02040212 EMBL:DAAA02040213
            EMBL:DAAA02040214 EMBL:DAAA02040215 EMBL:DAAA02040216
            EMBL:DAAA02040217 EMBL:BC123579 IPI:IPI00717487
            RefSeq:NP_001070349.1 UniGene:Bt.63620 SMR:Q08DT0
            Ensembl:ENSBTAT00000003086 GeneID:528483 KEGG:bta:528483
            InParanoid:Q08DT0 NextBio:20874836 Uniprot:Q08DT0
        Length = 876

 Score = 153 (58.9 bits), Expect = 4.0e-08, P = 4.0e-08
 Identities = 52/200 (26%), Positives = 84/200 (42%)

Query:    52 RQTVFASASIPQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQT 111
             RQT+  SA+     + + +  +      + V VH  A    P+ L   +++C  + K   
Sbjct:   247 RQTLLFSAT---QTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISV 303

Query:   112 LLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFN 171
             L S ++S   +  I+F     E             L         G S +L L       
Sbjct:   304 LYSFLRSHLKKKSIVFFSSCKE----------VQYLYRVFCRLRPGVS-LLALHGRQQQM 352

Query:   172 SRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFS 231
              R     E  +    +L +TDIAARG+D P    +  FD P  A  Y+HRAGRT R  + 
Sbjct:   353 RRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTAR--YK 410

Query:   232 DEKWTVTSIITSEELFVLQR 251
             ++   +  ++ SEE  ++Q+
Sbjct:   411 EDGEALLILLPSEEKGMVQQ 430


>UNIPROTKB|J9NZF6 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
            GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
            Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
        Length = 649

 Score = 135 (52.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
 Identities = 23/55 (41%), Positives = 37/55 (67%)

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGR 227
             R  ++   R+G   +LV+TD+A++G+D P   H+ N+D+P    +Y+HR GRTGR
Sbjct:   498 RTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGR 552

 Score = 58 (25.5 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
 Identities = 29/132 (21%), Positives = 52/132 (39%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L++K +  L+  + L +DE D + +                    RQT+  SA++
Sbjct:   349 GRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFK---GQRQTLLFSATM 405

Query:    62 PQHRRFLHNCIQQKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAP 121
             P+    + N  +    K   ++V       L       +V    KM Y  LL  +Q   P
Sbjct:   406 PKK---IQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVY--LLECLQKTPP 460

Query:   122 ESGIIFVGEQSE 133
                +IF  ++++
Sbjct:   461 PV-LIFAEKKAD 471


>UNIPROTKB|Q0C354 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
            GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
            BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
        Length = 464

 Score = 123 (48.4 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
 Identities = 27/72 (37%), Positives = 40/72 (55%)

Query:   156 KGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSA 215
             K   D + +    + + R  +L   + G   +LV+TDIAARGI +   TH+ N+DLP   
Sbjct:   272 KADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIAARGIHVDALTHVINYDLPDVP 331

Query:   216 IDYLHRAGRTGR 227
               ++HR GRT R
Sbjct:   332 EQFVHRIGRTAR 343

 Score = 68 (29.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
 Identities = 17/62 (27%), Positives = 30/62 (48%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G L  L+E+    L+ V+ L++DE D + +                  + RQT+F SA++
Sbjct:   139 GRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVP---SKRQTLFFSATM 195

Query:    62 PQ 63
             P+
Sbjct:   196 PK 197


>ZFIN|ZDB-GENE-050522-359 [details] [associations]
            symbol:zgc:112350 "zgc:112350" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
            EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
            UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
            KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
        Length = 512

 Score = 150 (57.9 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 55/201 (27%), Positives = 92/201 (45%)

Query:    61 IPQHRR-FLHNC-----IQ--QKWTKSDVVHVHVNAIKPLPSCLHHRFVICGKKMKYQTL 112
             IP+ RR FL +      +Q  Q+    D V   V++       L   ++    K K   L
Sbjct:   250 IPRDRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVDKLQQFYIFIPSKYKDCYL 309

Query:   113 LSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTTLLVDFLSNSYKGSSDVLLLEEEMNFNS 172
             +S++   A  S ++F G          N     LL+  L  +       + L  +M+ N 
Sbjct:   310 VSILNELAGNSFMVFCGT-------CNNTQRVALLLRNLGIT------AIPLHGQMSQNK 356

Query:   173 RAASLLEVRQGGGYLLVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSD 232
             R  +L + +     +L++TD+A+RG+D+P    + NFD+P  + DY+HR GRT R   S 
Sbjct:   357 RLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRSG 416

Query:   233 EKWTVTSIITSEELFVLQRYE 253
             +  T    +T  ++ + QR E
Sbjct:   417 KSIT---FVTQYDVELFQRIE 434


>WB|WBGene00002083 [details] [associations]
            symbol:inf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
            GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
            EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
            UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
            DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
            PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
            EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
            UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
            InParanoid:P27639 NextBio:890522 Uniprot:P27639
        Length = 402

 Score = 147 (56.8 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
 Identities = 38/122 (31%), Positives = 63/122 (51%)

Query:   143 STTLLVDFLSNSY-KGSSDVLLLEEEMNFNSRAASLLEVRQGGGYLLVSTDIAARGIDLP 201
             +T   VD L+    +    V  L  +M+   R   + E R G   +L++TDI ARGID+ 
Sbjct:   276 NTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQ 335

Query:   202 ETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVLQRYENELKFKSE 261
             + + + N+DLP +  +Y+HR GR+GR  F   K    + +T  +   L+  E+    + E
Sbjct:   336 QVSLVINYDLPSNRENYIHRIGRSGR--FG-RKGVAINFVTENDARQLKEIESYYTTQIE 392

Query:   262 EL 263
             E+
Sbjct:   393 EM 394

 Score = 36 (17.7 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
 Identities = 6/26 (23%), Positives = 14/26 (53%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVD 27
             G +  +I ++      +++ V+DE D
Sbjct:   156 GRVGDMINRNALDTSRIKMFVLDEAD 181


>UNIPROTKB|F1P8J6 [details] [associations]
            symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
            Pfam:PF13959 CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969
            EMBL:AAEX03014637 RefSeq:XP_543371.2 Ensembl:ENSCAFT00000011945
            GeneID:486246 KEGG:cfa:486246 Uniprot:F1P8J6
        Length = 599

 Score = 150 (57.9 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 62/257 (24%), Positives = 110/257 (42%)

Query:    15 LESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASIPQHRRFLHNCIQQ 74
             ++S++VLV+DE D L +                    R+T   SA+  Q    L     +
Sbjct:   162 VKSLEVLVLDEADRLLDMGFEASINTILEFLP---KQRRTGLFSATQTQEVESLVRAGLR 218

Query:    75 KWTKSDVVH--VHVNAIKPLPSCLHHRFVICGKKMKYQTLLSLIQSDAPESGIIFVGEQS 132
                +  V    V  ++ +  PS L + +++C    K+  L+  +++   E  +IF     
Sbjct:   219 NPVRISVKEKGVAASSTQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLIFF---- 274

Query:   133 EKSKKAGNAPSTTLLVDFLSNSYKG---SSDVLLLEEEMNFNSRAASLLEVRQGGGYLLV 189
                       ST   V++   + +    S  ++ +  +M  + R    +E R+    +LV
Sbjct:   275 ----------STCACVEYYGKALEALVKSVKIMCIHGKMK-HKRNKIFMEFRKLQSGILV 323

Query:   190 STDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELFVL 249
              TD+ ARGID+PE   +  +D P SA  ++HR GRT R         +  ++  EE +V 
Sbjct:   324 CTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGS--ALVFLLPMEESYVT 381

Query:   250 QRYENELKFKSEELTLQ 266
                 N+ K   +E+ LQ
Sbjct:   382 FLEINQ-KCPLQEMKLQ 397


>UNIPROTKB|E1BDM8 [details] [associations]
            symbol:DDX6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
            evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
            GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
            InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:DAAA02040478
            EMBL:DAAA02040479 IPI:IPI00697295 RefSeq:NP_001137339.1
            UniGene:Bt.12357 PRIDE:E1BDM8 Ensembl:ENSBTAT00000011952
            GeneID:513906 KEGG:bta:513906 NextBio:20871085 Uniprot:E1BDM8
        Length = 483

 Score = 119 (46.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 28/69 (40%), Positives = 40/69 (57%)

Query:   188 LVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELF 247
             LV TD+  RGID+     + NFD P+ A  YLHR GR+GR  F      + ++IT ++ F
Sbjct:   388 LVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGR--FGHLGLAI-NLITYDDRF 444

Query:   248 VLQRYENEL 256
              L+  E +L
Sbjct:   445 NLKSIEEQL 453

 Score = 72 (30.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 20/76 (26%), Positives = 39/76 (51%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  LI+K + K++ VQ++V+DE D L +                   NRQ +  SA+ 
Sbjct:   224 GRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLP---KNRQILLYSATF 280

Query:    62 PQH-RRFLHNCIQQKW 76
             P   ++F+++ +Q+ +
Sbjct:   281 PLSVQKFMNSHLQKPY 296


>UNIPROTKB|E2RR01 [details] [associations]
            symbol:DDX6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
            assembly" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
            GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
            InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:AAEX03003444
            RefSeq:XP_849975.1 Ensembl:ENSCAFT00000019743 GeneID:479414
            KEGG:cfa:479414 NextBio:20854600 Uniprot:E2RR01
        Length = 483

 Score = 119 (46.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 28/69 (40%), Positives = 40/69 (57%)

Query:   188 LVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELF 247
             LV TD+  RGID+     + NFD P+ A  YLHR GR+GR  F      + ++IT ++ F
Sbjct:   388 LVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGR--FGHLGLAI-NLITYDDRF 444

Query:   248 VLQRYENEL 256
              L+  E +L
Sbjct:   445 NLKSIEEQL 453

 Score = 72 (30.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 20/76 (26%), Positives = 39/76 (51%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  LI+K + K++ VQ++V+DE D L +                   NRQ +  SA+ 
Sbjct:   224 GRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLP---KNRQILLYSATF 280

Query:    62 PQH-RRFLHNCIQQKW 76
             P   ++F+++ +Q+ +
Sbjct:   281 PLSVQKFMNSHLQKPY 296


>UNIPROTKB|P26196 [details] [associations]
            symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
            evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
            evidence=IDA] [GO:0004386 "helicase activity" evidence=TAS]
            [GO:0003724 "RNA helicase activity" evidence=TAS] [GO:0016442
            "RNA-induced silencing complex" evidence=IDA] [GO:0033962
            "cytoplasmic mRNA processing body assembly" evidence=IDA]
            [GO:0000288 "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0005829 "cytosol"
            evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
            metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
            nuclear-transcribed mRNA catabolic process involved in
            deadenylation-dependent decay" evidence=TAS] Reactome:REACT_71
            Reactome:REACT_21257 InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
            GO:GO:0010467 GO:GO:0003723 GO:GO:0000932 GO:GO:0016442
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
            GO:GO:0033962 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
            KO:K12614 OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043928 HOVERGEN:HBG106685 OrthoDB:EOG4J1182
            EMBL:Z11685 EMBL:BC065007 EMBL:D17532 IPI:IPI00030320 PIR:S22651
            RefSeq:NP_001244120.1 RefSeq:NP_004388.2 UniGene:Hs.408461 PDB:1VEC
            PDB:2WAX PDB:2WAY PDBsum:1VEC PDBsum:2WAX PDBsum:2WAY
            ProteinModelPortal:P26196 SMR:P26196 DIP:DIP-29195N IntAct:P26196
            STRING:P26196 PhosphoSite:P26196 DMDM:116241327
            DOSAC-COBS-2DPAGE:P26196 PaxDb:P26196 PeptideAtlas:P26196
            PRIDE:P26196 DNASU:1656 Ensembl:ENST00000264018
            Ensembl:ENST00000526070 Ensembl:ENST00000534980 GeneID:1656
            KEGG:hsa:1656 UCSC:uc001pub.2 CTD:1656 GeneCards:GC11M118654
            HGNC:HGNC:2747 HPA:CAB004668 HPA:HPA024201 HPA:HPA026644 MIM:600326
            neXtProt:NX_P26196 PharmGKB:PA27229 InParanoid:P26196
            PhylomeDB:P26196 ChiTaRS:DDX6 EvolutionaryTrace:P26196
            GenomeRNAi:1656 NextBio:6820 ArrayExpress:P26196 Bgee:P26196
            CleanEx:HS_DDX6 Genevestigator:P26196 GermOnline:ENSG00000110367
            Uniprot:P26196
        Length = 483

 Score = 119 (46.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 28/69 (40%), Positives = 40/69 (57%)

Query:   188 LVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELF 247
             LV TD+  RGID+     + NFD P+ A  YLHR GR+GR  F      + ++IT ++ F
Sbjct:   388 LVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGR--FGHLGLAI-NLITYDDRF 444

Query:   248 VLQRYENEL 256
              L+  E +L
Sbjct:   445 NLKSIEEQL 453

 Score = 72 (30.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 20/76 (26%), Positives = 39/76 (51%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  LI+K + K++ VQ++V+DE D L +                   NRQ +  SA+ 
Sbjct:   224 GRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLP---KNRQILLYSATF 280

Query:    62 PQH-RRFLHNCIQQKW 76
             P   ++F+++ +Q+ +
Sbjct:   281 PLSVQKFMNSHLQKPY 296


>UNIPROTKB|F1SAJ5 [details] [associations]
            symbol:DDX6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
            evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
            GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
            InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:FP089499
            RefSeq:XP_003129962.1 RefSeq:XP_003357372.1 UniGene:Ssc.97711
            Ensembl:ENSSSCT00000016463 GeneID:100515499 KEGG:ssc:100515499
            Uniprot:F1SAJ5
        Length = 483

 Score = 119 (46.9 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 28/69 (40%), Positives = 40/69 (57%)

Query:   188 LVSTDIAARGIDLPETTHIYNFDLPRSAIDYLHRAGRTGRKPFSDEKWTVTSIITSEELF 247
             LV TD+  RGID+     + NFD P+ A  YLHR GR+GR  F      + ++IT ++ F
Sbjct:   388 LVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGR--FGHLGLAI-NLITYDDRF 444

Query:   248 VLQRYENEL 256
              L+  E +L
Sbjct:   445 NLKSIEEQL 453

 Score = 72 (30.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
 Identities = 20/76 (26%), Positives = 39/76 (51%)

Query:     2 GSLCQLIEKHIFKLESVQVLVIDEVDFLFNXXXXXXXXXXXXXXXXXCNNRQTVFASASI 61
             G +  LI+K + K++ VQ++V+DE D L +                   NRQ +  SA+ 
Sbjct:   224 GRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLP---KNRQILLYSATF 280

Query:    62 PQH-RRFLHNCIQQKW 76
             P   ++F+++ +Q+ +
Sbjct:   281 PLSVQKFMNSHLQKPY 296

WARNING:  HSPs involving 421 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      269       252   0.00082  114 3  11 22  0.43    33
                                                     32  0.47    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  671
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  189 KB (2108 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.55u 0.10s 21.65t   Elapsed:  00:00:01
  Total cpu time:  21.58u 0.10s 21.68t   Elapsed:  00:00:01
  Start:  Thu May  9 22:20:51 2013   End:  Thu May  9 22:20:52 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT5G19210 AT5G19210 AT5G19210	protein from Arabidopsis thaliana	5.8e-98
BLAST match view associations BLAST with KH1 KH1 KH1	protein from Drosophila melanogaster	1.2e-17
BLAST match view associations BLAST with VC_0660 VC_0660 VC_0660 ATP-dependent RNA helicase SrmB	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.7e-16
BLAST match view associations BLAST with VC_0660 VC_0660 VC_0660 ATP-dependent RNA helicase SrmB	protein from Vibrio cholerae O1 biovar El Tor	1.7e-16
BLAST match view associations BLAST with GSU_0914 GSU_0914 GSU_0914 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	1.5e-15
BLAST match view associations BLAST with srmB srmB srmB SrmB, DEAD-box RNA helicase	protein from Escherichia coli K-12	1.8e-14
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Gallus gallus	3.6e-14
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Gallus gallus	3.9e-14
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus licheniformis DSM 13 = ATCC 14580	7.9e-14
BLAST match view associations BLAST with VC_A0204 VC_A0204 VC_A0204 ATP-dependent RNA helicase RhlE	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.1e-13
BLAST match view associations BLAST with VC_A0204 VC_A0204 VC_A0204 ATP-dependent RNA helicase RhlE	protein from Vibrio cholerae O1 biovar El Tor	1.1e-13
BLAST match view associations BLAST with DDX43 DDX43 DDX43 Probable ATP-dependent RNA helicase DDX43	protein from Homo sapiens	1.7e-13
BLAST match view associations BLAST with CPS_4097 CPS_4097 CPS_4097 ATP-dependent RNA helicase SrmB	protein from Colwellia psychrerythraea 34H	2.2e-13
BLAST match view associations BLAST with GSU_0491 GSU_0491 GSU_0491 ATP-dependent RNA helicase RhlE	protein from Geobacter sulfurreducens PCA	3.2e-13
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus subtilis subsp. subtilis str. 168	3.4e-13
BLAST match view associations BLAST with CPS_0174 CPS_0174 CPS_0174 ATP-dependent RNA helicase RhlB	protein from Colwellia psychrerythraea 34H	1.1e-12
BLAST match view associations BLAST with LOC100300937 LOC100300937 LOC100300937 Uncharacterized protein	protein from Bos taurus	3.2e-12
BLAST match view associations BLAST with olvas olvas olvas VASA	protein from Oryzias latipes	3.3e-12
BLAST match view associations BLAST with FAL1 FAL1 FAL1	gene_product from Candida albicans	4.8e-12
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Geobacillus kaustophilus HTA426	6.8e-12
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Canis lupus familiaris	7.2e-12
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Coxiella burnetii RSA 493	7.6e-12
BLAST match view associations BLAST with CBU_0670 CBU_0670 CBU_0670 ATP-dependent RNA helicase RhlE, putative	protein from Coxiella burnetii RSA 493	7.6e-12
BLAST match view associations BLAST with glh-1 glh-1 glh-1	gene from Caenorhabditis elegans	7.7e-12
BLAST match view associations BLAST with glh-1 glh-1 glh-1 ATP-dependent RNA helicase glh-1	protein from Caenorhabditis elegans	7.7e-12
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	8.8e-12
BLAST match view associations BLAST with CHY_0229 CHY_0229 CHY_0229 ATP-dependent RNA helicase, DEAD box family	protein from Carboxydothermus hydrogenoformans Z-2901	8.8e-12
BLAST match view associations BLAST with ddx47 ddx47 ddx47 DEAD/DEAH box helicase	gene from Dictyostelium discoideum	1.1e-11
BLAST match view associations BLAST with rhlB rhlB rhlB ATP-dependent RNA helicase RhlB	protein from Shewanella oneidensis MR-1	1.2e-11
BLAST match view associations BLAST with SO_0407 SO_0407 SO_0407 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	1.2e-11
BLAST match view associations BLAST with ddx4 ddx4 ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Xenopus laevis	1.4e-11
BLAST match view associations BLAST with rhlB rhlB rhlB ATP-dependent RNA helicase RhlB	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.6e-11
BLAST match view associations BLAST with VC_0305 VC_0305 VC_0305 ATP-dependent RNA helicase RhlB	protein from Vibrio cholerae O1 biovar El Tor	1.6e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 10987	1.8e-11
BLAST match view associations BLAST with BA_2109 BA_2109 BA_2109 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	1.9e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis str. Al Hakam	1.9e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus E33L	1.9e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus thuringiensis serovar konkukian str. 97-27	1.9e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus anthracis	1.9e-11
BLAST match view associations BLAST with BA_0247 BA_0247 BA_0247 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	1.9e-11
BLAST match view associations BLAST with cshA cshA cshA DEAD-box ATP-dependent RNA helicase CshA	protein from Bacillus cereus ATCC 14579	1.9e-11
BLAST match view associations BLAST with SPO_1443 SPO_1443 SPO_1443 ATP-dependent RNA helicase RhlE	protein from Ruegeria pomeroyi DSS-3	1.9e-11
BLAST match view associations BLAST with F53H1.1 F53H1.1 F53H1.1	gene from Caenorhabditis elegans	2.2e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Sus scrofa	2.2e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Bos taurus	3.2e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Bos taurus	3.2e-11
BLAST match view associations BLAST with srmB srmB srmB ATP-dependent RNA helicase SrmB	protein from Shewanella oneidensis MR-1	3.2e-11
BLAST match view associations BLAST with SO_0947 SO_0947 SO_0947 ATP-dependent RNA helicase SrmB	protein from Shewanella oneidensis MR-1	3.2e-11
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	protein from Mus musculus	4.1e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Homo sapiens	4.1e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Homo sapiens	4.3e-11
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Macaca fascicularis	4.3e-11
BLAST match view associations BLAST with rhlE rhlE rhlE ATP-dependent RNA helicase	protein from Escherichia coli K-12	5.2e-11
BLAST match view associations BLAST with BAS5307 BAS5307 BAS5307 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis	5.5e-11
BLAST match view associations BLAST with BA_5703 BA_5703 BA_5703 ATP-dependent RNA helicase, DEAD/DEAH box family	protein from Bacillus anthracis str. Ames	5.5e-11
BLAST match view associations BLAST with LOC100523329 LOC100523329 LOC100523329 Uncharacterized protein	protein from Sus scrofa	6.1e-11
BLAST match view associations BLAST with CPS_3401 CPS_3401 CPS_3401 ATP-dependent RNA helicase, DEAD box family	protein from Colwellia psychrerythraea 34H	7.2e-11
BLAST match view associations BLAST with SO_3783 SO_3783 SO_3783 ATP-dependent RNA helicase, DEAD box family	protein from Shewanella oneidensis MR-1	7.3e-11
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor str. N16961	7.5e-11
BLAST match view associations BLAST with VC_A0804 VC_A0804 VC_A0804 ATP-dependent RNA helicase DeaD	protein from Vibrio cholerae O1 biovar El Tor	7.5e-11
BLAST match view associations BLAST with vasa vasa vasa vasa homolog	gene_product from Danio rerio	8.4e-11
BLAST match view associations BLAST with cgh-1 cgh-1 cgh-1	gene from Caenorhabditis elegans	8.8e-11
BLAST match view associations BLAST with cgh-1 cgh-1 cgh-1 ATP-dependent RNA helicase cgh-1	protein from Caenorhabditis elegans	8.8e-11
BLAST match view associations BLAST with TIF TIF TIF	gene_product from Candida albicans	9.9e-11
BLAST match view associations BLAST with TIF1 TIF1 TIF1 ATP-dependent RNA helicase eIF4A	protein from Candida albicans SC5314	9.9e-11
BLAST match view associations BLAST with glh-3 glh-3 glh-3	gene from Caenorhabditis elegans	1.1e-10
BLAST match view associations BLAST with glh-3 glh-3 glh-3 ATP-dependent RNA helicase glh-3	protein from Caenorhabditis elegans	1.1e-10
BLAST match view associations BLAST with DBP8 DBP8 DBP8	gene_product from Candida albicans	1.3e-10
BLAST match view associations BLAST with glh-2 glh-2 glh-2	gene from Caenorhabditis elegans	1.3e-10
BLAST match view associations BLAST with glh-2 glh-2 glh-2 ATP-dependent RNA helicase glh-2	protein from Caenorhabditis elegans	1.3e-10
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Sus scrofa	1.3e-10
BLAST match view associations BLAST with LOC100512980 LOC100512980 LOC100512980 Uncharacterized protein	protein from Sus scrofa	1.4e-10
BLAST match view associations BLAST with EIF4A-III EIF4A-III EIF4A-III eukaryotic initiation factor 4A-III	protein from Arabidopsis thaliana	1.5e-10
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	gene from Rattus norvegicus	1.6e-10
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Rattus norvegicus	1.6e-10
BLAST match view associations BLAST with ddx43 ddx43 ddx43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43	gene_product from Danio rerio	1.6e-10
BLAST match view associations BLAST with HNE_0695 HNE_0695 HNE_0695 Putative ATP-dependent RNA helicase RhlE	protein from Hyphomonas neptunium ATCC 15444	1.8e-10
BLAST match view associations BLAST with DDX43 DDX43 DDX43 Uncharacterized protein	protein from Sus scrofa	2.5e-10
BLAST match view associations BLAST with vbh-1 vbh-1 vbh-1	gene from Caenorhabditis elegans	2.6e-10
BLAST match view associations BLAST with DBP8 DBP8 DBP8 ATPase, putative RNA helicase	gene from Saccharomyces cerevisiae	3.0e-10
BLAST match view associations BLAST with AT1G72730 AT1G72730 AT1G72730	protein from Arabidopsis thaliana	3.3e-10
BLAST match view associations BLAST with pl10 pl10 pl10	gene_product from Danio rerio	3.8e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Bos taurus	4.0e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Uncharacterized protein	protein from Canis lupus familiaris	4.0e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Homo sapiens	4.0e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Sus scrofa	4.0e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Sus scrofa	4.0e-10
BLAST match view associations BLAST with Eif4a3 Eif4a3 Eif4a3 eukaryotic translation initiation factor 4A, isoform 3	gene from Rattus norvegicus	4.0e-10
BLAST match view associations BLAST with EIF4A3 EIF4A3 EIF4A3 Eukaryotic initiation factor 4A-III	protein from Gallus gallus	4.1e-10
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	4.2e-10
BLAST match view associations BLAST with rhlB rhlB rhlB RhlB	protein from Escherichia coli K-12	4.2e-10
BLAST match view associations BLAST with DDX25 DDX25 DDX25 ATP-dependent RNA helicase DDX25	protein from Bos taurus	4.6e-10
BLAST match view associations BLAST with DDX43 DDX43 DDX43 Uncharacterized protein	protein from Gallus gallus	4.6e-10
BLAST match view associations BLAST with ddx3 ddx3 ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3	gene_product from Danio rerio	5.4e-10