BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024295
(269 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 2 TNLCLKYPIALN-GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP 59
TNLC K A G+M+ D SR SV G+ +YH ST+S+Y V+ V K+DP+
Sbjct: 109 TNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPL 168
Query: 60 SDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNP 119
L CG TG GA W AKVE + GA++IIGID +
Sbjct: 169 DKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDS 228
Query: 120 WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXX 179
K E K FG+ +F+NP D +K I E++ +T G GVDY FEC G S++ ALE
Sbjct: 229 KKYETAKKFGVNEFVNPKDH-DKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHK 286
Query: 180 XXXXXXXXXXXXD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF 235
+ P ++ GR KGT FGG K+++ +P L++K NKE
Sbjct: 287 GWGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSRTQVPWLVEKYMNKEI 342
Query: 236 KLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 267
K+ + +TH++ L EI+KA LL + C++ ++
Sbjct: 343 KVDEYITHNLTLGEINKAFDLLHEGTCLRCVL 374
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 2 TNLCLKYPIALN-GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP 59
TNLC K A G+M+ D SR S+ G+ +YH ST+S+Y V+ V K+DP
Sbjct: 127 TNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPL 186
Query: 60 SDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNP 119
L CG TG GA W AKVE + GA++IIGID +
Sbjct: 187 EKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDS 246
Query: 120 WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXX 179
K ++ K FG+T+FINP E + I +++ +T G GVDY FEC G S++ ALE
Sbjct: 247 KKFDRAKNFGVTEFINPK-EHEQPIQQVIVDLTDG-GVDYSFECIGNVSVMRSALECCHK 304
Query: 180 XXXXXXXXXXXXDAM----VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF 235
P ++ GR KGT FGG K++S +P+L+DK KE
Sbjct: 305 GWGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSRSQVPSLVDKYLKKEI 360
Query: 236 KLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 267
K+ + +TH++ L +I+KA L+ DC++V++
Sbjct: 361 KVDEYITHNMTLADINKAFDLMHDGDCLRVVL 392
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 137/274 (50%), Gaps = 11/274 (4%)
Query: 1 MTNLC-----LKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP 55
+TNLC KYP LM D TSR + +G+ +YH S++S+Y V+ + +VD
Sbjct: 107 LTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDD 166
Query: 56 SIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGI 115
+ + CGF++GYGAA AKV ++ GA++II I
Sbjct: 167 EANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAI 226
Query: 116 DKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 175
D N K K KA G TD +NP E +K + +++ +T G GVDY +C G L A++
Sbjct: 227 DINGEKFPKAKALGATDCLNP-RELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVD 284
Query: 176 TTXXXXXXXXXXXXXXDAM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 234
T D M +P + L GR++ GT FGG K+ +P L+ KNK+
Sbjct: 285 CTVLGWGSCTVVGAKVDEMTIPTVDVIL---GRSINGTFFGGWKSVDSVPNLVSDYKNKK 341
Query: 235 FKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 268
F L L+TH + E I+ AI L+K+ ++ ++T
Sbjct: 342 FDLDLLVTHALPFESINDAIDLMKEGKSIRTILT 375
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 137/274 (50%), Gaps = 11/274 (4%)
Query: 1 MTNLC-----LKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP 55
+TNLC KYP LM D TSR + +G+ +YH S++S+Y V+ + +VD
Sbjct: 107 LTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDD 166
Query: 56 SIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGI 115
+ + CGF++GYGAA AKV ++ GA++II I
Sbjct: 167 EANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAI 226
Query: 116 DKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 175
D N K K KA G TD +NP E +K + +++ +T G GVDY +C G L A++
Sbjct: 227 DINGEKFPKAKALGATDCLNP-RELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVD 284
Query: 176 TTXXXXXXXXXXXXXXDAM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 234
T D M +P + L GR++ GT FGG K+ +P L+ KNK+
Sbjct: 285 CTVLGWGSCTVVGAKVDEMTIPTVDVIL---GRSINGTFFGGWKSVDSVPNLVSDYKNKK 341
Query: 235 FKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 268
F L L+TH + E I+ AI L+K+ ++ ++T
Sbjct: 342 FDLDLLVTHALPFESINDAIDLMKEGKSIRTILT 375
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 139/272 (51%), Gaps = 10/272 (3%)
Query: 2 TNLCLK-YPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
TN C+K + +M +R + +G+K+ ST+S+Y V++ V K+DPS
Sbjct: 109 TNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLD 168
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
L CG +TG+GAA AKVE GA +II +D NP
Sbjct: 169 TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPD 228
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXX- 179
K EK K FG TDF+NP+D ++ IS+++ +T+G GVD+ EC G ++ ALE+
Sbjct: 229 KFEKAKVFGATDFVNPNDH-SEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKG 286
Query: 180 --XXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKL 237
A P+ +IA GRT KG+ FGG K K +P ++ +K+ KL
Sbjct: 287 WGVSVLVGWTDLHDVATRPIQLIA----GRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKL 342
Query: 238 HQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+ +TH + LE ++ AI L+K C++ ++++
Sbjct: 343 DEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 374
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 136/276 (49%), Gaps = 15/276 (5%)
Query: 1 MTNLC-----LKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP 55
+TNLC LK P + LM D TSR + +G+ +YH F ST+S+Y V+ + K+D
Sbjct: 110 LTNLCGKISNLKSPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDD 169
Query: 56 SIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGI 115
+ L CGF+TGYGAA AKV + GA++IIGI
Sbjct: 170 DANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGI 229
Query: 116 DKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 175
D N K K KA G TD +NP D +K I E++ +T G GVD+ +C G + AL+
Sbjct: 230 DINSEKFVKAKALGATDCLNPRDL-HKPIQEVIIELTKG-GVDFALDCAGGSETMKAALD 287
Query: 176 TTXXXXXXXXXXXXXXDA----MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCK 231
T + + P +I GRT+ GT FGG K+ +P L+ K
Sbjct: 288 CTTAGWGSCTFIGVAAGSKGLTVFPEELII----GRTINGTFFGGWKSVDSIPKLVTDYK 343
Query: 232 NKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 267
NK+F L L+TH + ++I +A L+ Q ++ ++
Sbjct: 344 NKKFNLDALVTHTLPFDKISEAFDLMNQGKSIRTIL 379
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 136/266 (51%), Gaps = 2/266 (0%)
Query: 3 NLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDA 62
NLC++ I G++ D T+R + +G+ ++H + ST++EY V+D + V K+D + P
Sbjct: 109 NLCIRSDITGRGVLADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKV 168
Query: 63 SFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKK 122
+ CGF+TGYGAA K KV+ + GA++IIGID N K
Sbjct: 169 CLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKF 228
Query: 123 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXX 182
EK A G T+ I+P D K ISE++ +T G V Y FE G + +AL +
Sbjct: 229 EKAMAVGATECISPKDS-TKPISEVLSEMT-GNNVGYTFEVIGHLETMIDALASCHMNYG 286
Query: 183 XXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLT 242
A + L GRT KG FGG+K++ D+P L+ + K+F L QL+T
Sbjct: 287 TSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLIT 346
Query: 243 HHVKLEEIDKAIQLLKQPDCVKVLIT 268
H + ++I + +LL ++ ++T
Sbjct: 347 HVLPFKKISEGFELLNSGQSIRTVLT 372
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 136/266 (51%), Gaps = 2/266 (0%)
Query: 3 NLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDA 62
NLC++ I G++ D T+R + +G+ ++H + ST++EY V+D + V K+D + P
Sbjct: 109 NLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKV 168
Query: 63 SFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKK 122
+ CGF+TGYGAA K KV+ + GA++IIGID N K
Sbjct: 169 CLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKF 228
Query: 123 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXX 182
EK A G T+ I+P D K ISE++ +T G V Y FE G + +AL +
Sbjct: 229 EKAMAVGATECISPKDS-TKPISEVLSEMT-GNNVGYTFEVIGHLETMIDALASCHMNYG 286
Query: 183 XXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLT 242
A + L GRT KG FGG+K++ D+P L+ + K+F L QL+T
Sbjct: 287 TSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLIT 346
Query: 243 HHVKLEEIDKAIQLLKQPDCVKVLIT 268
H + ++I + +LL ++ ++T
Sbjct: 347 HVLPFKKISEGFELLNSGQSIRTVLT 372
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 136/273 (49%), Gaps = 11/273 (4%)
Query: 2 TNLCLKYPIALN-GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
TNLC K + GLM D TSR + +G+ + H ST+SEY V+ V K+DP
Sbjct: 108 TNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLD 167
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
L CG +TGYGAA AK+E ++ GA++IIG+D N
Sbjct: 168 KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKD 227
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT--- 177
K + K FG T+ INP D +K I E++ +T G GVDY FEC G ++ ALE
Sbjct: 228 KFARAKEFGATECINPQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKG 285
Query: 178 -XXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 236
A P ++ GRT KGT FGG K+ +P L+ + +K+ K
Sbjct: 286 WGVSVVVGVAASGEEIATRPFQLVT----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 341
Query: 237 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+ + +TH++ +EI+KA +L+ ++ ++ I
Sbjct: 342 VDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 374
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 136/273 (49%), Gaps = 11/273 (4%)
Query: 2 TNLCLKYPIALN-GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
TNLC K + GLM D TSR + +G+ + H ST+SEY V+ V K+DP
Sbjct: 107 TNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLD 166
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
L CG +TGYGAA AK+E ++ GA++IIG+D N
Sbjct: 167 KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKD 226
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT--- 177
K + K FG T+ INP D +K I E++ +T G GVDY FEC G ++ ALE
Sbjct: 227 KFARAKEFGATECINPQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKG 284
Query: 178 -XXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 236
A P ++ GRT KGT FGG K+ +P L+ + +K+ K
Sbjct: 285 WGVSVVVGVAASGEEIATRPFQLVT----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 340
Query: 237 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+ + +TH++ +EI+KA +L+ ++ ++ I
Sbjct: 341 VDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 373
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 136/273 (49%), Gaps = 11/273 (4%)
Query: 2 TNLCLKYPIALN-GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
TNLC K + GLM D TSR + +G+ + H ST+SEY V+ V K+DP
Sbjct: 107 TNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLD 166
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
L CG +TGYGAA AK+E ++ GA++IIG+D N
Sbjct: 167 KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKD 226
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT--- 177
K + K FG T+ INP D +K I E++ +T G GVDY FEC G ++ ALE
Sbjct: 227 KFARAKEFGATECINPQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKG 284
Query: 178 -XXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 236
A P ++ GRT KGT FGG K+ +P L+ + +K+ K
Sbjct: 285 WGVSVVVGVAASGEEIATRPFQLVT----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 340
Query: 237 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+ + +TH++ +EI+KA +L+ ++ ++ I
Sbjct: 341 VDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 373
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 136/273 (49%), Gaps = 11/273 (4%)
Query: 2 TNLCLKYPIALN-GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
TNLC K + GLM D TSR + +G+ + H ST+SEY V+ V K+DP
Sbjct: 108 TNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLD 167
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
L CG +TGYGAA AK+E ++ GA++IIG+D N
Sbjct: 168 KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKD 227
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT--- 177
K + K FG T+ INP D +K I E++ +T G GVDY FEC G ++ ALE
Sbjct: 228 KFARAKEFGATECINPQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKG 285
Query: 178 -XXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 236
A P ++ GRT KGT FGG K+ +P L+ + +K+ K
Sbjct: 286 WGVSVVVGVAASGEEIATRPFQLVT----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 341
Query: 237 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+ + +TH++ +EI+KA +L+ ++ ++ I
Sbjct: 342 VDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 374
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 11/272 (4%)
Query: 3 NLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 61
N CLK +++ G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 62 ASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWK 121
+ CGF+TGYG+A K AKV + + GAA+IIG+D N K
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 122 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXX 181
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 FAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 286
Query: 182 XXXXXXXXXXD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKL 237
D +M P+ +++ GRT KG FGG K+K +P L+ K+F L
Sbjct: 287 GVSVIVAVTPDSQNLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFAL 342
Query: 238 HQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
L+TH + E+I++ LL+ + ++ ++T
Sbjct: 343 DPLITHVLPFEKINEGFDLLRSGESIRTILTF 374
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 133/270 (49%), Gaps = 10/270 (3%)
Query: 3 NLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDA 62
NLCLK G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKV 168
Query: 63 SFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKK 122
+ CGF+TGYG+A K AKV + + GAA+IIG+D N K
Sbjct: 169 CLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF 228
Query: 123 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXX 182
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 AKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVAALSCCQEAYG 286
Query: 183 XXXXXXXXXD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLH 238
D +M P+ +++ GRT KG FGG K+K +P L+ K+F L
Sbjct: 287 VSVIVGVPPDSQNLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALD 342
Query: 239 QLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 268
L+TH + E+I++ LL+ ++ ++T
Sbjct: 343 PLITHVLPFEKINEGFDLLRSGKSIRTILT 372
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 135/269 (50%), Gaps = 5/269 (1%)
Query: 3 NLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 61
N CLK +++ G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 62 ASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWK 121
+ CGF+TGYG+A K AKV + + GAA+IIG+D N K
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 122 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXX 181
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 FAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 286
Query: 182 XXXXXXXXXXDAM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQL 240
D+ + +N + L GRT KG FGG K+K +P L+ K+F L L
Sbjct: 287 GVSVIVGVPPDSQNLSMNPMLLL-SGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPL 345
Query: 241 LTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+TH + E+I++ LL+ + ++ ++T
Sbjct: 346 ITHVLPFEKINEGFDLLRSGESIRTILTF 374
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 11/272 (4%)
Query: 3 NLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 61
N CLK +++ G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 62 ASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWK 121
+ CGF+TGYG+A K AKV + + GAA+IIG+D N K
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 122 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXX 181
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 FAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 286
Query: 182 XXXXXXXXXXD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKL 237
D +M P+ +++ GRT KG FGG K+K +P L+ K+F L
Sbjct: 287 GVSVISGVPPDSQNLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFAL 342
Query: 238 HQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
L+TH + E+I++ LL+ + ++ ++T
Sbjct: 343 DPLITHVLPFEKINEGFDLLRSGESIRTILTF 374
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 135/269 (50%), Gaps = 5/269 (1%)
Query: 3 NLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 61
N CLK +++ G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 62 ASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWK 121
+ CGF+TGYG+A K AKV + + GAA+IIG+D N K
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 122 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXX 181
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 FAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 286
Query: 182 XXXXXXXXXXDAM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQL 240
D+ + +N + L GRT KG FGG K+K +P L+ K+F L L
Sbjct: 287 GVSVIVGVPPDSQNLSMNPMLLL-SGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPL 345
Query: 241 LTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+TH + E+I++ LL+ + ++ ++T
Sbjct: 346 ITHVLPFEKINEGFDLLRSGESIRTILTF 374
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 133/270 (49%), Gaps = 10/270 (3%)
Query: 3 NLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDA 62
NLCLK G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKV 168
Query: 63 SFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKK 122
+ CGF+TGYG+A K AKV + + GAA+IIG+D N K
Sbjct: 169 CLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF 228
Query: 123 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXX 182
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 AKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVAALSCCQEAYG 286
Query: 183 XXXXXXXXXD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLH 238
D +M P+ +++ GRT KG FGG K+K +P L+ K+F L
Sbjct: 287 VSVIVGVPPDSQNLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALD 342
Query: 239 QLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 268
L+TH + E+I++ LL+ ++ ++T
Sbjct: 343 PLITHVLPFEKINEGFDLLRSGKSIRTILT 372
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 11/272 (4%)
Query: 3 NLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 61
N CLK +++ G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 62 ASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWK 121
+ CGF+TGYG+A K AKV + + GAA+IIG+D N K
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 122 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXX 181
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 FAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 286
Query: 182 XXXXXXXXXXD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKL 237
D +M P+ +++ GRT KG FGG K+K +P L+ K+F L
Sbjct: 287 GVSVITGVPPDSQNLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFAL 342
Query: 238 HQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
L+TH + E+I++ LL+ + ++ ++T
Sbjct: 343 DPLITHVLPFEKINEGFDLLRSGESIRTILTF 374
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 11/272 (4%)
Query: 3 NLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 61
N CLK +++ G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 62 ASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWK 121
+ CGF+TGYG+A K AKV + + GAA+IIG+D N K
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 122 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXX 181
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 FAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 286
Query: 182 XXXXXXXXXXD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKL 237
D +M P+ +++ GRT KG FGG K+K +P L+ K+F L
Sbjct: 287 GVSVIVGVPPDSQNLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFAL 342
Query: 238 HQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
L+TH + E+I++ LL+ + ++ ++T
Sbjct: 343 DPLITHVLPFEKINEGFDLLRSGESIRTILTF 374
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 136/271 (50%), Gaps = 11/271 (4%)
Query: 3 NLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 61
N CLK +++ G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 62 ASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWK 121
+ CGF+TGYG+A K AKV + + GAA+IIG+D N K
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 122 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXX 181
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 FAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 286
Query: 182 XXXXXXXXXXD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKL 237
D +M P+ +++ GRT KG FGG K+K +P L+ K+F L
Sbjct: 287 GVSVIVGVPPDSQNLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFAL 342
Query: 238 HQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 268
L+TH + E+I++ LL+ + ++ ++T
Sbjct: 343 DPLITHVLPFEKINEGFDLLRSGESIRTILT 373
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 11/272 (4%)
Query: 3 NLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 61
N CLK +++ G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 62 ASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWK 121
+ CGF+TGYG+A K AKV + + GAA+IIG+D N K
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 122 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXX 181
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 FAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 286
Query: 182 XXXXXXXXXXD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKL 237
D +M P+ +++ GRT KG FGG K+K +P L+ K+F L
Sbjct: 287 GVSVIVGVPPDSQNLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFAL 342
Query: 238 HQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
L+TH + E+I++ LL+ + ++ ++T
Sbjct: 343 DPLITHVLPFEKINEGFDLLRSGESIRTILTF 374
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 135/269 (50%), Gaps = 5/269 (1%)
Query: 3 NLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 61
N CLK +++ G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 62 ASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWK 121
+ CGF+TGYG+A K AKV + + GAA+IIG+D N K
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 122 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXX 181
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 FAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 286
Query: 182 XXXXXXXXXXDAM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQL 240
D+ + +N + L GRT KG FGG K+K +P L+ K+F L L
Sbjct: 287 GVSVIVGVPPDSQNLSMNPMLLL-SGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPL 345
Query: 241 LTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+TH + E+I++ LL+ + ++ ++T
Sbjct: 346 ITHVLPFEKINEGFDLLRSGESIRTILTF 374
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 136/272 (50%), Gaps = 11/272 (4%)
Query: 3 NLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 61
N CLK +++ G M D TSR + RG+ ++H ST+S+Y V+D V K+D +
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 62 ASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWK 121
+ CGF+TGYG+A K AKV + + GAA+IIG+D N +
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDR 228
Query: 122 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXX 181
K K G T+ +NP D K I E++ +++G GVD+ FE G + AL
Sbjct: 229 FAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 286
Query: 182 XXXXXXXXXXD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKL 237
D +M P+ +++ GRT KG FGG K+K +P L+ K+F L
Sbjct: 287 GVSVIVGVPPDSQNLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFAL 342
Query: 238 HQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
L+TH + E+I++ LL+ + ++ ++T
Sbjct: 343 DPLITHVLPFEKINEGFDLLRSGESIRTILTF 374
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 131/276 (47%), Gaps = 17/276 (6%)
Query: 2 TNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
+N CLK + G + D T R + RG+ ++H ST+S+Y V+D N V K+D +
Sbjct: 108 SNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLE 167
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
+ CGF+TGYG+A AKV + GAA+II +D N
Sbjct: 168 KVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKD 227
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLLS--EA 173
K K K G T+ INP D K I E++K +T G GVD+ FE G + SLL EA
Sbjct: 228 KFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEA 285
Query: 174 LETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 233
T+ + M+ L GRT KG +GG K+K +P L+ K
Sbjct: 286 CGTSVIVGVPPASQNLSINPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAK 338
Query: 234 EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+F L L+TH + E+I++ LL ++ ++T
Sbjct: 339 KFSLDALITHVLPFEKINEGFDLLHSGKSIRTVLTF 374
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 131/276 (47%), Gaps = 17/276 (6%)
Query: 2 TNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
+N CLK + G + D T R + RG+ ++H ST+S+Y V+D N V K+D +
Sbjct: 108 SNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLE 167
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
+ CGF+TGYG+A AKV + GAA+II +D N
Sbjct: 168 KVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKD 227
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEA 173
K K K G T+ INP D K I E++K +T G GVD+ FE G + SLL EA
Sbjct: 228 KFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEA 285
Query: 174 LETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 233
T+ + M+ L GRT KG +GG K+K +P L+ K
Sbjct: 286 CGTSVIVGVPPASQNLSINPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAK 338
Query: 234 EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+F L L+TH + E+I++ LL ++ ++T
Sbjct: 339 KFSLDALITHVLPFEKINEGFDLLHSGKSIRTVLTF 374
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 131/276 (47%), Gaps = 17/276 (6%)
Query: 2 TNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
+N CLK + G + D T R + RG+ ++H ST+S+Y V+D N V K+D +
Sbjct: 108 SNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLE 167
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
+ CGF+TGYG+A AKV + GAA+II +D N
Sbjct: 168 KVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKD 227
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLLS--EA 173
K K K G T+ INP D K I E++K +T G GVD+ FE G + SLL EA
Sbjct: 228 KFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEA 285
Query: 174 LETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 233
T+ + M+ L GRT KG +GG K+K +P L+ K
Sbjct: 286 CGTSVIVGVPPASQNLSINPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAK 338
Query: 234 EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+F L L+TH + E+I++ LL ++ ++T
Sbjct: 339 KFSLDALITHVLPFEKINEGFDLLHSGKSIRTVLTF 374
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 132/276 (47%), Gaps = 17/276 (6%)
Query: 2 TNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
+N CLK + G + D T R + G+ ++H ST+S+Y V+D N V K+D +
Sbjct: 108 SNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLE 167
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
+ CGF+TGYG+A K AKV + GAA+II +D N
Sbjct: 168 KVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKD 227
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLLS--EA 173
K K K G T+ INP D K I E++K +T G GVD+ FE G + SLL EA
Sbjct: 228 KFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGQLDTMMASLLCCHEA 285
Query: 174 LETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 233
T+ + M+ L GRT KG FGG K+K +P L+ K
Sbjct: 286 CGTSVIVGVPPDSQNLSINPMLLLT-------GRTWKGAIFGGFKSKESVPKLVADFMAK 338
Query: 234 EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+F L L+T+ + E+I++ LL+ ++ ++T
Sbjct: 339 KFSLDALITNVLPFEKINEGFDLLRSGKSIRTVLTF 374
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 130/276 (47%), Gaps = 17/276 (6%)
Query: 2 TNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
+N CLK + G + D T R + RG+ ++H ST+S+Y V+D N V K+D +
Sbjct: 108 SNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLE 167
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
+ CGF+TGYG+A AKV + GAA+II +D N
Sbjct: 168 KVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKD 227
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLLS--EA 173
K K K G T+ INP D K I E++K +T G GVD+ FE G + SLL EA
Sbjct: 228 KFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEA 285
Query: 174 LETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 233
T+ + M+ L GRT KG +GG K+K +P L+ K
Sbjct: 286 CGTSVIVGVPPASQNLSINPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAK 338
Query: 234 EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 269
+F L L+TH + E+I++ LL + ++T
Sbjct: 339 KFSLDALITHVLPFEKINEGFDLLHSGKSICTVLTF 374
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 17/274 (6%)
Query: 2 TNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
+N CLK ++ G + D TSR + R + ++H ST+S+Y V+D N V K+D +
Sbjct: 108 SNYCLKNDVSNPQGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLE 167
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
+ CGF+TGYG+A AKV + GAA+II +D N
Sbjct: 168 KVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKD 227
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLLS--EA 173
K K K G T+ INP D K I E++K +T G GVD+ FE G + SLL EA
Sbjct: 228 KFAKAKELGATECINPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEA 285
Query: 174 LETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 233
T+ + M+ L GRT KG GG K+K +P L+ K
Sbjct: 286 CGTSVIVGVPPDSQNLSMNPMLLLT-------GRTWKGAILGGFKSKECVPKLVADFMAK 338
Query: 234 EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 267
+F L L+TH + E+I++ LL ++ ++
Sbjct: 339 KFSLDALITHVLPFEKINEGFDLLHSGKSIRTIL 372
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 131/267 (49%), Gaps = 5/267 (1%)
Query: 2 TNLCLKYPI-ALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 60
+N C K + A GLM D TSR + RG+ +Y++ ST++EY V+ V K+DP P
Sbjct: 109 SNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKA-PL 167
Query: 61 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 120
++ + CGF TGYGAA AKV + GA++IIG+ +
Sbjct: 168 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKD 227
Query: 121 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXX 180
K K G T+ +NP D +K I E++ T+G GVDY EC G + AL++T
Sbjct: 228 KFPKAIELGATECLNPKDY-DKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCG 285
Query: 181 XXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQL 240
L GR+LKG+ FGG K + ++ L+D K+ ++ L
Sbjct: 286 SGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFL 344
Query: 241 LTHHVKLEEIDKAIQLLKQPDCVKVLI 267
++ + L++I+KA +LL V+ ++
Sbjct: 345 VSTKLTLDQINKAFELLSSGQGVRSIM 371
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 7/223 (3%)
Query: 32 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXX 91
H F+ S+++ Y + N VKV + L CG TG GA KV
Sbjct: 138 HFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTW 197
Query: 92 XXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD-DEPNKSISELVKG 150
++ GA+ II +D + E K G T IN +P +I E+ G
Sbjct: 198 GAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDG 257
Query: 151 ITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLK 210
GV++ E TG P +L + ++ +V L GG+T+
Sbjct: 258 -----GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTIL 312
Query: 211 GTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 253
G G K +P L+ + +F QL+ + +EI++A
Sbjct: 313 GVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKFYA-FDEINQA 354
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 13/243 (5%)
Query: 34 FSCSTWSEYM-VIDANYVVKVDPSIDP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXXXX 91
F + EY V DA+ + + P P +A ++ TTG+ A + A +E
Sbjct: 115 FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIELGATVAVL 173
Query: 92 XXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI 151
++ GA +II + P + K +G TD +N D P I + +
Sbjct: 174 GIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDGP---IESQIMNL 230
Query: 152 THGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTL 209
T G GVD G +++ A++ ++P+ + CG +T+
Sbjct: 231 TEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTI 290
Query: 210 KGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVKVL 266
KG G + ++++ L D L +L+TH + + I++A+ L+K D +K +
Sbjct: 291 KGGLCPGGRLRAEM--LRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIKAV 348
Query: 267 ITI 269
+ +
Sbjct: 349 VIL 351
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 8/166 (4%)
Query: 105 RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 164
R GA +I I +P + + + G +N + + + + ITHG G D+ E T
Sbjct: 216 RSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEAT 275
Query: 165 GVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGI---KTKS 221
G L E E VP V LK TF GI T
Sbjct: 276 GDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWL----VLKNATFKGIWVSDTSH 331
Query: 222 DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 267
+ T+ +N + L +L+TH + L+E +KA++L++ + +KV++
Sbjct: 332 FVKTVSITSRNYQL-LSKLITHRLPLKEANKALELMESREALKVIL 376
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 34 FSCSTWSEYM-VIDANYVVKVDPSIDP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXXXX 91
F + EY V DA+ + + P P +A ++ TTG+ A + A +E
Sbjct: 115 FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVI 173
Query: 92 XXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI 151
++ GA +IIG+ P E K +G TD +N N I + V +
Sbjct: 174 GIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIEDQVMKL 230
Query: 152 THGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTL 209
T+G GVD G LS+A++ + + + CG +T+
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTI 290
Query: 210 KGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVKVL 266
KG G + +++ L D L +L+TH + + I++A+ L+K D +K +
Sbjct: 291 KGGLCPGGRLRAE--RLRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIKAV 348
Query: 267 ITI 269
+ +
Sbjct: 349 VIL 351
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 34 FSCSTWSEYM-VIDANYVVKVDPSIDP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXXXX 91
F + EY V DA+ + + P P +A ++ TTG+ A + A ++
Sbjct: 115 FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVI 173
Query: 92 XXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI 151
++ GA +IIG+ P E K +G TD +N N I + V +
Sbjct: 174 GIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIVDQVMKL 230
Query: 152 THGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTL 209
T+G GVD G LS+A+ + + + CG +T+
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTI 290
Query: 210 KGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVKVL 266
KG G + ++++ L D L +L+TH + + I++A+ L+K D +K +
Sbjct: 291 KGGLCPGGRLRAEM--LRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIKAV 348
Query: 267 ITI 269
+ +
Sbjct: 349 VIL 351
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 34 FSCSTWSEYM-VIDANYVVKVDPSIDP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXXXX 91
F + EY V DA+ + + P P +A ++ TTG+ A + A ++
Sbjct: 115 FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVI 173
Query: 92 XXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI 151
++ GA +IIG+ P E K +G TD +N N I + V +
Sbjct: 174 GIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIVDQVMKL 230
Query: 152 THGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTL 209
T+G GVD G LS+A+ + + + CG +T+
Sbjct: 231 TNGKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTI 290
Query: 210 KGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVKVL 266
KG G + ++++ L D L +L+TH + + I++A+ L+K D +K +
Sbjct: 291 KGGLCPGGRLRAEM--LRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIKAV 348
Query: 267 ITI 269
+ +
Sbjct: 349 VIL 351
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 105 RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 164
++ GA +II + P + K +G TD +N D P I + +T G GVD
Sbjct: 187 KLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDGP---IESQIMNLTEGKGVDAAIIAG 243
Query: 165 GVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKTKSD 222
G +++ A++ ++P+ + CG +T+KG G + +
Sbjct: 244 GNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLR-- 301
Query: 223 LPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLK 258
+ L+D K +L+TH + + I+KA L+K
Sbjct: 302 MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMK 338
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 105 RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 164
++ GA +IIG+ P E K +G TD +N N I + V +T+G GVD
Sbjct: 187 KLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIVDQVMKLTNGKGVDRVIMAG 243
Query: 165 GVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKTKSD 222
G LS+A++ + + + CG +T+KG G + +
Sbjct: 244 GGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLR-- 301
Query: 223 LPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLK 258
+ L+D K +L+TH + + I+KA L+K
Sbjct: 302 MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMK 338
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 8/157 (5%)
Query: 105 RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 164
++ GA +IIG+ P E K +G TD +N N I + V +T+G GVD
Sbjct: 187 KLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIVDQVMKLTNGKGVDRVIMAG 243
Query: 165 GVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKTKSD 222
G LS+A+ + + + CG +T+KG G + +
Sbjct: 244 GGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLR-- 301
Query: 223 LPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLK 258
+ L+D K +L+TH + + I+KA L+K
Sbjct: 302 MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMK 338
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 8/157 (5%)
Query: 105 RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 164
++ GA +II + P + K +G TD +N D P I + +T G GVD
Sbjct: 187 KLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDGP---IESQIMNLTEGKGVDAAIIAG 243
Query: 165 GVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKTKSD 222
G +++ A++ ++ + + CG +T+KG G + +
Sbjct: 244 GNADIMATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCPGGRLR-- 301
Query: 223 LPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLK 258
+ L+D K +L+TH + + I+KA L+K
Sbjct: 302 MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMK 338
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 40 SEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXX 99
+E ++ A+Y VKV +DP +AS ++C T Y A K + V+
Sbjct: 120 AEEAIVVADYAVKVPDGLDPIEASSITCAGVTTY-KAIKVSGVKPGDWQVIFGAGGLGNL 178
Query: 100 XXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD-EPNKSISELVKGITHGMGVD 158
+ AK+I +D N K K G IN D P I K IT G+GV
Sbjct: 179 AIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIINSGDVNPVDEI----KKITGGLGVQ 234
Query: 159 YCFECT 164
C
Sbjct: 235 SAIVCA 240
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 16/167 (9%)
Query: 105 RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 164
R GA I+ D NP++ + + +NP +E + E+V+ +T G GV+ E +
Sbjct: 185 RASGAGPILVSDPNPYRLAFARPYA-DRLVNPLEE---DLLEVVRRVT-GSGVEVLLEFS 239
Query: 165 GVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACGGR-TLKGTTFGGIKTKSDL 223
G + + + L +P + I G ++G T GI +
Sbjct: 240 GNEAAIHQGLMALIPGGEARILG-------IPSDPIRFDLAGELVMRGITAFGIAGRRLW 292
Query: 224 PTLLDKCK---NKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 267
T + + L LLTH + L +A LL VKV++
Sbjct: 293 QTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVIL 339
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 105 RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 164
+ GA +I + + +++E K G INP +E + + V IT G GVD E +
Sbjct: 187 KASGAYPVIVSEPSDFRRELAKKVGADYVINPFEE---DVVKEVXDITDGNGVDVFLEFS 243
Query: 165 GVPSLLSEALETT 177
G P L + L+
Sbjct: 244 GAPKALEQGLQAV 256
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 105 RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 164
+ GA +I + + +++E K G INP +E + + V IT G GVD E +
Sbjct: 188 KASGAYPVIVSEPSDFRRELAKKVGADYVINPFEE---DVVKEVXDITDGNGVDVFLEFS 244
Query: 165 GVPSLLSEALETT 177
G P L + L+
Sbjct: 245 GAPKALEQGLQAV 257
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 40 SEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXX 99
+E ++ A+Y VKV +DP +AS ++C T Y A K + V+
Sbjct: 120 AEEAIVVADYAVKVPDGLDPIEASSITCAGVTTY-KAIKVSGVKPGDWQVIFGAGGLGNL 178
Query: 100 XXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD-EPNKSISELVKGITHGMGVD 158
+ AK+I +D N K K G IN D P I K IT G+GV
Sbjct: 179 AIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEI----KKITGGLGVQ 234
Query: 159 YCFECT 164
C
Sbjct: 235 SAIVCA 240
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 108 GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP 167
GA+K+I + + ++ K G I+P E + E V T+G+G E TGVP
Sbjct: 237 GASKVILSEPSEVRRNLAKELGADHVIDPTKE---NFVEAVLDYTNGLGAKLFLEATGVP 293
Query: 168 SLLSEALE 175
L+ +E
Sbjct: 294 QLVWPQIE 301
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 7/160 (4%)
Query: 108 GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP 167
GAA+++ D + + K K G + +E + I++ V+G+ G + ECTGV
Sbjct: 194 GAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGLL-GSKPEVTIECTGVE 252
Query: 168 SLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLL 227
+ + + T VPL + A +KG + + P +
Sbjct: 253 TSIQAGIYATHSGGTLVLVGLGSEMTSVPL--VHAATREVDIKGV----FRYCNTWPMAI 306
Query: 228 DKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 267
+K + L+TH LE+ +A + K+ +KV+I
Sbjct: 307 SMLASKSVNVKPLVTHRFPLEKALEAFETSKKGLGLKVMI 346
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 31.2 bits (69), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 105 RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP-DDEPNKSISELVKGITHGMGVDYCFEC 163
+ GA +I + + ++++ K G +NP +++P K V IT G GV+ E
Sbjct: 188 KASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFEEDPVK----FVMDITDGAGVEVFLEF 243
Query: 164 TGVPSLLSEALETT 177
+G P L + L+
Sbjct: 244 SGAPKALEQGLKAV 257
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 3/141 (2%)
Query: 27 GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXX 86
G+++ + TW EY+ A++VV + SID A+ + T + + +++
Sbjct: 87 GKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRND 146
Query: 87 XXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISE 146
++I + +N E+ G I+ P + E
Sbjct: 147 VLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAP---LYE 203
Query: 147 LVKGITHGMGVDYCFECTGVP 167
V +T+G+G D + G P
Sbjct: 204 TVMELTNGIGADAAIDSIGGP 224
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 11/163 (6%)
Query: 110 AKIIGIDKNPWKKEKGKAFG--MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP 167
A ++ ++P + E K G +T ++P E SI E ++ + + +C+G
Sbjct: 193 AFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP-NVTIDCSGNE 251
Query: 168 SLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLL 227
++ + T VPL AC + F + +D P L
Sbjct: 252 KCITIGINITRTGGTLMLVGMGSQMVTVPL---VNACAREIDIKSVF---RYCNDYPIAL 305
Query: 228 DKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP--DCVKVLIT 268
+ + + QL+TH KLE+ A + ++ + +KV+I+
Sbjct: 306 EMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 348
>pdb|3NZR|A Chain A, Crystal Structure Of 2-Dehydro-3-Deoxyphosphogluconate
Aldolase From Vibrio Fischeri Es114
pdb|3NZR|B Chain B, Crystal Structure Of 2-Dehydro-3-Deoxyphosphogluconate
Aldolase From Vibrio Fischeri Es114
pdb|3NZR|C Chain C, Crystal Structure Of 2-Dehydro-3-Deoxyphosphogluconate
Aldolase From Vibrio Fischeri Es114
pdb|3NZR|D Chain D, Crystal Structure Of 2-Dehydro-3-Deoxyphosphogluconate
Aldolase From Vibrio Fischeri Es114
Length = 248
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 192 DAMVPLNVIALAC----GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL 247
DA+VP+ A+A GG ++K GG++T+ + + C +K+F L T + L
Sbjct: 141 DAIVPVET-AIAXLKDXGGSSVKYFPXGGLETREEFACVAKACADKDFWLEP--TGGIDL 197
Query: 248 EEIDKAIQLLKQPDCVKVL 266
E ++ Q+ K++
Sbjct: 198 ENYEEIXQIALDAGVSKII 216
>pdb|2OZB|B Chain B, Structure Of A Human Prp31-15.5k-U4 Snrna Complex
pdb|2OZB|E Chain E, Structure Of A Human Prp31-15.5k-U4 Snrna Complex
Length = 260
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 217 IKTKSDLPTLLDKCKNKEFKLHQLLTH 243
I+T +L LDKCKN E L Q+LT+
Sbjct: 63 IRTVKELGNSLDKCKNNE-NLQQILTN 88
>pdb|3SIU|B Chain B, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
Monomeric Form
pdb|3SIU|E Chain E, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
Monomeric Form
pdb|3SIV|B Chain B, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
Dimeric Form
pdb|3SIV|E Chain E, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
Dimeric Form
pdb|3SIV|H Chain H, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
Dimeric Form
pdb|3SIV|K Chain K, Structure Of A Hprp31-15.5k-U4atac 5' Stem Loop Complex,
Dimeric Form
Length = 254
Score = 27.3 bits (59), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 217 IKTKSDLPTLLDKCKNKEFKLHQLLTH 243
I+T +L LDKCKN E L Q+LT+
Sbjct: 57 IRTVKELGNSLDKCKNNE-NLQQILTN 82
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 4/126 (3%)
Query: 40 SEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXX 99
SEY+V+ + V S+D ++AS L C T + A ++ +
Sbjct: 145 SEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALF 204
Query: 100 XXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY 159
+ G A++I + K ++ A G IN +E E V +T G D+
Sbjct: 205 GLQIAKATG-AEVIVTSSSREKLDRAFALGADHGINRLEE---DWVERVYALTGDRGADH 260
Query: 160 CFECTG 165
E G
Sbjct: 261 ILEIAG 266
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,286,239
Number of Sequences: 62578
Number of extensions: 258516
Number of successful extensions: 591
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 464
Number of HSP's gapped (non-prelim): 55
length of query: 269
length of database: 14,973,337
effective HSP length: 97
effective length of query: 172
effective length of database: 8,903,271
effective search space: 1531362612
effective search space used: 1531362612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)