Query 024296
Match_columns 269
No_of_seqs 131 out of 1261
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 05:47:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gxw_A Adenosine deaminase; am 100.0 6.2E-58 2.1E-62 425.6 22.5 234 2-269 24-265 (380)
2 3rys_A Adenosine deaminase 1; 100.0 2.2E-55 7.5E-60 403.8 23.0 234 3-269 9-247 (343)
3 3pao_A Adenosine deaminase; st 100.0 1.4E-55 4.8E-60 402.6 20.5 235 2-269 5-244 (326)
4 3iar_A Adenosine deaminase; pu 100.0 1.2E-53 4.1E-58 395.2 23.6 232 5-269 4-259 (367)
5 2pgf_A Adenosine deaminase; me 100.0 1.4E-44 4.7E-49 335.7 22.2 235 2-269 39-285 (371)
6 3lgd_A Adenosine deaminase CEC 100.0 1.7E-43 5.7E-48 338.1 20.8 241 2-269 74-382 (508)
7 2a3l_A AMP deaminase, AMPD; at 100.0 4.6E-35 1.6E-39 287.9 7.4 229 2-269 243-567 (701)
8 4dyk_A Amidohydrolase; adenosi 98.7 2.6E-07 8.7E-12 85.9 16.5 169 53-269 88-280 (451)
9 3h4u_A Amidohydrolase; signatu 98.7 4E-07 1.4E-11 85.4 17.0 200 7-269 86-318 (479)
10 4f0r_A 5-methylthioadenosine/S 98.5 2.7E-06 9.4E-11 78.8 16.8 169 53-269 86-278 (447)
11 3lnp_A Amidohydrolase family p 98.5 5.3E-06 1.8E-10 77.4 17.6 169 53-269 108-305 (468)
12 4dzh_A Amidohydrolase; adenosi 98.5 8E-06 2.7E-10 76.7 18.5 191 7-269 72-287 (472)
13 3ls9_A Triazine hydrolase; atr 98.4 3.9E-05 1.3E-09 71.0 19.9 203 7-269 56-296 (456)
14 3mdu_A N-formimino-L-glutamate 98.3 1.6E-05 5.5E-10 74.3 15.7 181 52-269 76-291 (453)
15 1ra0_A Cytosine deaminase; alp 97.9 0.00017 5.8E-09 66.4 14.8 201 7-269 58-279 (430)
16 4aql_A Guanine deaminase; hydr 97.8 0.0046 1.6E-07 58.1 22.1 173 52-269 119-323 (476)
17 3gnh_A L-lysine, L-arginine ca 97.8 0.00016 5.6E-09 65.5 11.3 96 170-269 164-268 (403)
18 2r8c_A Putative amidohydrolase 97.5 0.00067 2.3E-08 62.3 11.7 93 171-266 173-273 (426)
19 2i9u_A Cytosine/guanine deamin 97.5 0.0085 2.9E-07 55.1 18.6 67 203-269 208-291 (439)
20 3feq_A Putative amidohydrolase 97.4 0.00053 1.8E-08 62.5 9.8 92 171-266 170-270 (423)
21 2paj_A Putative cytosine/guani 97.4 0.0095 3.2E-07 55.5 17.9 69 201-269 225-307 (492)
22 3be7_A Zn-dependent arginine c 97.2 0.0023 8E-08 58.1 11.5 94 171-267 164-265 (408)
23 2qs8_A XAA-Pro dipeptidase; am 97.2 0.0016 5.6E-08 59.5 10.5 62 202-266 213-274 (418)
24 4f0l_A Amidohydrolase; ssgcid, 97.2 0.019 6.6E-07 53.0 17.9 165 69-269 101-300 (458)
25 2qt3_A N-isopropylammelide iso 97.2 0.0056 1.9E-07 55.3 13.9 162 70-269 99-278 (403)
26 2q09_A Imidazolonepropionase; 97.2 0.00059 2E-08 62.5 7.0 68 202-269 220-287 (416)
27 2ood_A BLR3880 protein; PSI-II 96.9 0.074 2.5E-06 49.5 18.5 67 203-269 212-295 (475)
28 2vun_A Enamidase; nicotinate d 96.8 0.0043 1.5E-07 55.8 9.2 64 203-266 172-243 (386)
29 3v7p_A Amidohydrolase family p 96.5 0.15 5E-06 46.9 17.2 78 191-269 174-279 (427)
30 3ooq_A Amidohydrolase; structu 96.4 0.0013 4.3E-08 60.0 2.5 65 204-269 206-272 (396)
31 2p9b_A Possible prolidase; pro 96.4 0.025 8.7E-07 52.2 11.3 61 203-266 225-291 (458)
32 2bb0_A Imidazolonepropionase; 96.2 0.0082 2.8E-07 54.8 6.9 68 202-269 227-294 (421)
33 2imr_A Hypothetical protein DR 96.2 0.021 7.2E-07 52.2 9.5 67 203-269 219-325 (420)
34 2puz_A Imidazolonepropionase; 95.9 0.013 4.5E-07 53.3 6.9 68 202-269 232-299 (419)
35 3icj_A Uncharacterized metal-d 95.8 0.0074 2.5E-07 57.9 4.8 64 203-269 327-395 (534)
36 1zzm_A Putative deoxyribonucle 94.6 0.2 7E-06 42.4 9.9 63 205-269 114-179 (259)
37 1ydn_A Hydroxymethylglutaryl-C 94.3 1.2 4E-05 39.0 14.2 205 17-265 20-263 (295)
38 2y1h_A Putative deoxyribonucle 94.1 0.35 1.2E-05 41.3 10.1 62 206-269 127-190 (272)
39 1ydo_A HMG-COA lyase; TIM-barr 94.0 1.5 5E-05 38.8 14.3 205 18-265 23-265 (307)
40 2ftp_A Hydroxymethylglutaryl-C 93.9 1.7 5.6E-05 38.2 14.5 206 17-265 24-267 (302)
41 2ztj_A Homocitrate synthase; ( 93.9 1.4 4.8E-05 40.2 14.3 134 82-249 80-222 (382)
42 2ics_A Adenine deaminase; TIM 93.9 0.15 5.1E-06 45.3 7.7 81 188-269 148-245 (379)
43 2cw6_A Hydroxymethylglutaryl-C 93.7 1.4 4.8E-05 38.6 13.6 131 82-246 86-230 (298)
44 3ble_A Citramalate synthase fr 93.4 1.1 3.9E-05 40.0 12.6 149 81-262 101-268 (337)
45 1yix_A Deoxyribonuclease YCFH; 92.6 0.31 1.1E-05 41.2 7.4 79 189-269 93-177 (265)
46 2xio_A Putative deoxyribonucle 92.4 0.54 1.9E-05 41.1 8.8 63 205-269 127-193 (301)
47 3ivs_A Homocitrate synthase, m 91.8 3.6 0.00012 38.1 14.0 133 83-249 117-256 (423)
48 3ewb_X 2-isopropylmalate synth 91.4 3.5 0.00012 36.1 12.9 204 17-261 21-251 (293)
49 1r30_A Biotin synthase; SAM ra 91.4 2 6.9E-05 38.5 11.7 88 169-260 98-188 (369)
50 1j6o_A TATD-related deoxyribon 91.1 0.44 1.5E-05 40.8 6.7 62 205-268 120-185 (268)
51 2ogj_A Dihydroorotase; TIM bar 89.7 0.38 1.3E-05 43.5 5.3 65 204-269 188-264 (417)
52 3cjp_A Predicted amidohydrolas 89.4 1.9 6.4E-05 36.6 9.2 93 173-268 101-202 (272)
53 3iix_A Biotin synthetase, puta 88.9 1.3 4.4E-05 39.2 8.1 78 170-251 84-162 (348)
54 3rmj_A 2-isopropylmalate synth 88.7 7.3 0.00025 35.3 13.1 189 18-249 29-237 (370)
55 1p1m_A Hypothetical protein TM 88.2 6.2 0.00021 35.1 12.3 52 203-254 179-241 (406)
56 2ob3_A Parathion hydrolase; me 88.2 0.8 2.7E-05 40.7 6.2 63 207-269 150-219 (330)
57 1xwy_A DNAse TATD, deoxyribonu 88.1 1.5 5.1E-05 37.0 7.7 62 206-269 113-178 (264)
58 2nx9_A Oxaloacetate decarboxyl 87.1 19 0.00065 33.6 15.2 105 157-264 140-258 (464)
59 1nvm_A HOA, 4-hydroxy-2-oxoval 87.1 9.4 0.00032 34.0 12.7 105 157-264 133-251 (345)
60 1yrr_A N-acetylglucosamine-6-p 86.9 1.7 5.7E-05 38.7 7.6 55 207-263 177-264 (382)
61 2vc7_A Aryldialkylphosphatase; 86.6 1.4 4.9E-05 38.1 6.8 64 206-269 152-222 (314)
62 2gzx_A Putative TATD related D 85.4 3 0.0001 34.9 8.1 63 205-269 109-176 (265)
63 1bf6_A Phosphotriesterase homo 85.3 2.5 8.4E-05 35.9 7.6 63 206-268 139-207 (291)
64 3irs_A Uncharacterized protein 83.0 2.9 9.9E-05 36.1 7.1 94 172-268 104-213 (291)
65 3eeg_A 2-isopropylmalate synth 82.6 13 0.00046 32.8 11.4 129 88-249 93-231 (325)
66 1mzh_A Deoxyribose-phosphate a 82.0 16 0.00055 30.3 11.2 104 157-267 117-221 (225)
67 3tn4_A Phosphotriesterase; lac 81.4 6.2 0.00021 35.6 8.8 79 188-268 175-262 (360)
68 3k2g_A Resiniferatoxin-binding 80.7 4.2 0.00014 36.7 7.4 64 205-268 190-261 (364)
69 3pnz_A Phosphotriesterase fami 80.5 4.5 0.00015 36.0 7.5 64 205-268 168-237 (330)
70 3rcm_A TATD family hydrolase; 80.5 4.2 0.00015 35.4 7.2 62 205-268 114-179 (287)
71 1m5w_A Pyridoxal phosphate bio 80.3 2.6 9E-05 35.9 5.5 64 176-246 77-153 (243)
72 3gk0_A PNP synthase, pyridoxin 80.2 3.2 0.00011 36.0 6.1 65 176-247 105-182 (278)
73 1rqb_A Transcarboxylase 5S sub 79.8 43 0.0015 31.9 17.1 90 157-249 157-253 (539)
74 3t7v_A Methylornithine synthas 79.5 3.8 0.00013 36.3 6.7 87 170-260 91-182 (350)
75 3gr7_A NADPH dehydrogenase; fl 78.3 29 0.00099 30.7 12.2 161 70-261 135-322 (340)
76 3rhg_A Putative phophotriester 77.2 6.9 0.00024 35.3 7.8 65 205-269 179-253 (365)
77 2z00_A Dihydroorotase; zinc bi 76.4 3.3 0.00011 37.1 5.4 39 189-228 140-178 (426)
78 3l5l_A Xenobiotic reductase A; 76.3 42 0.0014 29.9 16.2 165 70-261 149-340 (363)
79 3guw_A Uncharacterized protein 75.3 3.6 0.00012 35.3 5.1 78 188-268 91-178 (261)
80 3gtx_A Organophosphorus hydrol 74.6 9 0.00031 34.1 7.7 64 205-268 173-242 (339)
81 3q58_A N-acetylmannosamine-6-p 73.7 31 0.0011 28.7 10.5 82 178-266 93-184 (229)
82 3igs_A N-acetylmannosamine-6-p 71.4 38 0.0013 28.2 10.5 82 178-266 93-184 (232)
83 1f76_A Dihydroorotate dehydrog 70.6 54 0.0018 28.6 13.1 52 209-261 277-334 (336)
84 3c8f_A Pyruvate formate-lyase 70.2 6.2 0.00021 32.2 5.3 82 171-254 51-136 (245)
85 3bg3_A Pyruvate carboxylase, m 70.0 88 0.003 30.8 17.1 91 171-264 259-362 (718)
86 3ij6_A Uncharacterized metal-d 67.0 9.5 0.00032 33.3 6.0 57 170-228 107-165 (312)
87 2ffi_A 2-pyrone-4,6-dicarboxyl 66.5 9.7 0.00033 32.1 5.9 60 189-250 105-170 (288)
88 3gg7_A Uncharacterized metallo 66.1 15 0.0005 31.4 6.8 61 206-268 105-169 (254)
89 2gwg_A 4-oxalomesaconate hydra 66.0 66 0.0023 27.9 12.4 57 172-230 121-184 (350)
90 3o6c_A PNP synthase, pyridoxin 65.6 15 0.0005 31.6 6.6 63 176-247 76-151 (260)
91 3p6l_A Sugar phosphate isomera 65.1 56 0.0019 26.8 15.3 125 78-245 24-159 (262)
92 3hq1_A 2-isopropylmalate synth 64.6 55 0.0019 31.8 11.2 137 81-246 154-309 (644)
93 2qf7_A Pyruvate carboxylase pr 64.4 1.4E+02 0.0047 31.1 14.9 92 170-264 706-809 (1165)
94 1wa3_A 2-keto-3-deoxy-6-phosph 62.8 32 0.0011 27.5 8.2 93 163-266 12-107 (205)
95 1eye_A DHPS 1, dihydropteroate 62.2 20 0.00068 31.1 7.0 61 204-267 66-128 (280)
96 4dzi_A Putative TIM-barrel met 62.0 13 0.00045 34.1 6.2 58 170-230 172-236 (423)
97 3nur_A Amidohydrolase; TIM bar 62.0 11 0.00039 33.6 5.6 56 171-228 139-196 (357)
98 2qul_A D-tagatose 3-epimerase; 61.6 68 0.0023 26.5 12.7 20 79-98 20-39 (290)
99 1z41_A YQJM, probable NADH-dep 61.6 83 0.0028 27.5 18.0 161 70-261 135-322 (338)
100 2vhl_A N-acetylglucosamine-6-p 61.2 14 0.00049 32.5 6.2 38 209-248 186-224 (396)
101 3ipw_A Hydrolase TATD family p 60.8 34 0.0012 30.2 8.5 61 206-268 155-220 (325)
102 3lmz_A Putative sugar isomeras 59.2 73 0.0025 26.1 16.5 116 78-239 32-152 (257)
103 3zwt_A Dihydroorotate dehydrog 58.0 97 0.0033 27.7 11.1 136 87-250 174-329 (367)
104 3nqb_A Adenine deaminase 2; PS 57.9 21 0.00072 34.3 7.1 77 188-267 183-261 (608)
105 2yb1_A Amidohydrolase; HET: AM 57.9 6.5 0.00022 34.1 3.2 29 7-38 1-32 (292)
106 4e38_A Keto-hydroxyglutarate-a 57.9 56 0.0019 27.4 8.9 95 163-266 36-130 (232)
107 3obe_A Sugar phosphate isomera 57.8 73 0.0025 27.1 10.1 21 78-98 38-58 (305)
108 3sfw_A Dihydropyrimidinase; hy 56.6 93 0.0032 28.1 11.0 39 188-226 144-185 (461)
109 2yxo_A Histidinol phosphatase; 56.2 5.8 0.0002 33.3 2.5 27 9-38 1-31 (267)
110 1aj0_A DHPS, dihydropteroate s 56.1 45 0.0016 28.8 8.3 60 205-267 76-137 (282)
111 4inf_A Metal-dependent hydrola 56.1 20 0.00069 32.2 6.2 57 171-229 157-215 (373)
112 4e38_A Keto-hydroxyglutarate-a 55.9 90 0.0031 26.1 10.7 52 207-261 116-170 (232)
113 2dvt_A Thermophilic reversible 55.8 38 0.0013 28.8 7.8 57 171-229 105-169 (327)
114 3ngj_A Deoxyribose-phosphate a 54.2 77 0.0026 26.7 9.2 84 158-246 143-227 (239)
115 3kru_A NADH:flavin oxidoreduct 52.9 1.2E+02 0.0041 26.7 13.9 161 70-260 134-321 (343)
116 2hbv_A 2-amino-3-carboxymucona 51.7 48 0.0016 28.6 7.9 56 171-229 125-182 (334)
117 4hnl_A Mandelate racemase/muco 51.5 1.3E+02 0.0046 27.0 11.1 148 79-267 158-327 (421)
118 1gkp_A Hydantoinase; hydrolase 51.2 23 0.00078 31.8 5.9 24 203-227 161-184 (458)
119 3ovg_A Amidohydrolase; structu 50.8 34 0.0012 30.7 6.8 63 206-268 170-239 (363)
120 1gvf_A Tagatose-bisphosphate a 50.8 43 0.0015 29.1 7.2 96 170-268 26-133 (286)
121 2yx0_A Radical SAM enzyme; pre 50.3 63 0.0022 28.0 8.5 53 206-259 158-213 (342)
122 1x7f_A Outer surface protein; 49.0 47 0.0016 30.2 7.4 97 171-269 39-146 (385)
123 1gvf_A Tagatose-bisphosphate a 48.1 30 0.001 30.1 5.8 79 170-250 155-234 (286)
124 4i6k_A Amidohydrolase family p 48.1 30 0.001 29.5 5.9 59 189-249 118-182 (294)
125 2wm1_A 2-amino-3-carboxymucona 46.8 40 0.0014 29.0 6.6 57 171-229 121-179 (336)
126 2wje_A CPS4B, tyrosine-protein 46.2 10 0.00034 31.8 2.4 29 10-38 6-39 (247)
127 3p6l_A Sugar phosphate isomera 46.2 50 0.0017 27.1 6.9 105 156-266 8-131 (262)
128 1ydn_A Hydroxymethylglutaryl-C 46.0 1.1E+02 0.0036 26.1 9.1 95 170-267 23-137 (295)
129 2f6k_A Metal-dependent hydrola 45.5 57 0.002 27.4 7.2 57 171-229 101-159 (307)
130 1xrt_A Dihydroorotase, dhoase; 45.4 14 0.00047 33.7 3.4 27 202-228 203-229 (467)
131 3tva_A Xylose isomerase domain 45.4 1.3E+02 0.0044 24.9 10.7 72 173-246 102-180 (290)
132 1vhc_A Putative KHG/KDPG aldol 44.8 1.3E+02 0.0045 24.7 12.4 105 78-246 31-135 (224)
133 1olt_A Oxygen-independent copr 44.7 59 0.002 29.8 7.6 71 189-260 104-183 (457)
134 3pm6_A Putative fructose-bisph 44.1 46 0.0016 29.3 6.3 96 171-268 36-149 (306)
135 2p0o_A Hypothetical protein DU 43.1 37 0.0013 30.7 5.7 94 172-268 16-118 (372)
136 2anu_A Hypothetical protein TM 42.9 12 0.00042 31.4 2.5 27 9-38 21-50 (255)
137 2hk0_A D-psicose 3-epimerase; 42.5 1.5E+02 0.0052 24.8 11.5 19 79-98 40-58 (309)
138 3q94_A Fructose-bisphosphate a 42.4 33 0.0011 29.8 5.2 78 170-249 159-237 (288)
139 3ngf_A AP endonuclease, family 41.8 1.4E+02 0.0049 24.4 14.3 19 79-97 26-44 (269)
140 1tx2_A DHPS, dihydropteroate s 41.3 83 0.0028 27.4 7.6 89 176-267 63-163 (297)
141 1twd_A Copper homeostasis prot 40.8 97 0.0033 26.4 7.7 44 205-250 104-151 (256)
142 3nzt_A Glutamate--cysteine lig 39.9 29 0.00098 32.9 4.6 37 81-117 320-359 (525)
143 2bdq_A Copper homeostasis prot 39.1 98 0.0034 25.8 7.4 44 205-250 107-156 (224)
144 1m65_A Hypothetical protein YC 38.9 15 0.0005 30.3 2.3 27 9-38 3-33 (245)
145 1jub_A Dihydroorotate dehydrog 38.6 1.8E+02 0.0062 24.7 9.7 47 209-256 230-282 (311)
146 3kws_A Putative sugar isomeras 38.1 1.7E+02 0.0058 24.1 13.5 21 78-98 40-60 (287)
147 3r12_A Deoxyribose-phosphate a 37.8 1.9E+02 0.0065 24.6 10.4 97 157-259 158-254 (260)
148 3dx5_A Uncharacterized protein 37.8 1.7E+02 0.0058 24.0 10.8 71 174-246 85-168 (286)
149 2agk_A 1-(5-phosphoribosyl)-5- 37.7 1.3E+02 0.0046 25.2 8.3 71 180-261 45-123 (260)
150 4ef8_A Dihydroorotate dehydrog 37.7 2.2E+02 0.0074 25.3 12.1 161 52-249 109-307 (354)
151 3iwp_A Copper homeostasis prot 37.2 2E+02 0.007 24.8 10.7 41 203-245 140-183 (287)
152 3gip_A N-acyl-D-glutamate deac 37.1 37 0.0013 31.1 4.9 98 168-265 159-276 (480)
153 4ac7_C Urease subunit alpha; h 36.3 16 0.00054 35.1 2.2 75 189-264 215-296 (570)
154 4ubp_C Protein (urease (chain 36.3 16 0.00054 35.1 2.2 75 189-264 215-296 (570)
155 3hbl_A Pyruvate carboxylase; T 36.3 3.9E+02 0.013 27.7 16.4 77 170-249 689-768 (1150)
156 3dxi_A Putative aldolase; TIM 36.0 55 0.0019 28.8 5.6 69 190-261 160-240 (320)
157 3cpr_A Dihydrodipicolinate syn 35.5 1.5E+02 0.005 25.6 8.3 76 170-245 34-115 (304)
158 3l23_A Sugar phosphate isomera 35.3 1.1E+02 0.0038 25.9 7.5 20 79-98 32-51 (303)
159 3tak_A DHDPS, dihydrodipicolin 35.0 1E+02 0.0036 26.3 7.3 77 170-246 19-101 (291)
160 3fkr_A L-2-keto-3-deoxyarabona 35.0 98 0.0033 26.8 7.1 77 170-246 26-108 (309)
161 3ajx_A 3-hexulose-6-phosphate 34.8 75 0.0026 25.2 6.0 96 161-265 2-105 (207)
162 3vni_A Xylose isomerase domain 34.7 1.9E+02 0.0065 23.8 12.8 21 78-98 19-39 (294)
163 3o0f_A Putative metal-dependen 34.6 20 0.00069 31.4 2.5 27 9-38 14-43 (301)
164 3q94_A Fructose-bisphosphate a 34.2 45 0.0016 29.0 4.7 96 171-268 30-139 (288)
165 2nx9_A Oxaloacetate decarboxyl 34.1 2.8E+02 0.0097 25.5 10.6 93 171-268 98-206 (464)
166 3gbv_A Putative LACI-family tr 34.1 1.6E+02 0.0056 24.0 8.3 63 157-226 40-102 (304)
167 3l21_A DHDPS, dihydrodipicolin 33.9 1.1E+02 0.0037 26.5 7.2 76 170-245 33-114 (304)
168 3qy7_A Tyrosine-protein phosph 33.9 24 0.00081 30.1 2.8 29 10-38 2-35 (262)
169 4gj1_A 1-(5-phosphoribosyl)-5- 33.8 99 0.0034 25.7 6.7 73 186-261 44-119 (243)
170 2ehh_A DHDPS, dihydrodipicolin 33.7 1E+02 0.0034 26.4 6.9 73 170-245 18-99 (294)
171 3flu_A DHDPS, dihydrodipicolin 33.7 1.2E+02 0.0041 26.0 7.5 77 170-246 25-107 (297)
172 3ro6_B Putative chloromuconate 33.6 2.4E+02 0.0083 24.6 9.8 71 160-241 185-257 (356)
173 1rk6_A D-aminoacylase; TIM bar 33.6 1.6E+02 0.0056 26.6 8.8 59 203-261 212-284 (496)
174 1ep3_A Dihydroorotate dehydrog 33.5 1.8E+02 0.0063 24.5 8.6 46 209-255 231-279 (311)
175 3m5v_A DHDPS, dihydrodipicolin 33.4 98 0.0034 26.6 6.8 73 170-245 25-107 (301)
176 1v77_A PH1877P, hypothetical p 33.2 47 0.0016 27.1 4.5 29 241-269 96-130 (212)
177 3u0h_A Xylose isomerase domain 33.0 79 0.0027 25.9 6.0 20 79-98 19-38 (281)
178 3lab_A Putative KDPG (2-keto-3 33.0 2.1E+02 0.0071 23.6 9.1 104 78-245 27-136 (217)
179 2zjr_W 50S ribosomal protein L 32.8 71 0.0024 20.5 4.3 42 219-260 1-45 (55)
180 1i60_A IOLI protein; beta barr 32.4 2E+02 0.0068 23.2 14.9 18 79-96 17-34 (278)
181 1xky_A Dihydrodipicolinate syn 32.3 1.3E+02 0.0045 25.8 7.5 73 170-245 30-111 (301)
182 3f2b_A DNA-directed DNA polyme 32.2 26 0.00087 36.1 3.1 26 7-32 114-144 (1041)
183 2fi9_A Outer membrane protein; 32.1 28 0.00097 26.3 2.7 39 230-268 55-100 (128)
184 1e9y_B Urease subunit beta; hy 32.0 21 0.00072 34.0 2.4 75 189-264 214-295 (569)
185 2yxg_A DHDPS, dihydrodipicolin 31.9 1.1E+02 0.0036 26.2 6.7 77 169-245 17-99 (289)
186 3qze_A DHDPS, dihydrodipicolin 31.1 1.2E+02 0.0041 26.3 7.0 76 170-245 41-122 (314)
187 2wkj_A N-acetylneuraminate lya 31.0 1.2E+02 0.0041 26.1 7.0 76 170-245 29-110 (303)
188 2z26_A Dihydroorotase, dhoase; 30.9 91 0.0031 27.2 6.3 66 203-269 118-199 (347)
189 2qpx_A Predicted metal-depende 30.8 2.8E+02 0.0095 24.4 10.6 63 205-268 204-286 (376)
190 3b4u_A Dihydrodipicolinate syn 30.4 1.2E+02 0.0041 25.9 6.9 76 170-245 21-102 (294)
191 4do7_A Amidohydrolase 2; enzym 30.3 45 0.0016 28.4 4.1 52 187-239 99-155 (303)
192 2y5s_A DHPS, dihydropteroate s 30.1 1.2E+02 0.0039 26.4 6.6 86 178-267 48-144 (294)
193 3si9_A DHDPS, dihydrodipicolin 29.8 1.1E+02 0.0039 26.5 6.7 73 170-245 40-121 (315)
194 2v9d_A YAGE; dihydrodipicolini 29.7 1.5E+02 0.0051 26.1 7.5 76 170-245 49-130 (343)
195 3daq_A DHDPS, dihydrodipicolin 29.5 1.3E+02 0.0043 25.8 6.8 76 170-245 20-101 (292)
196 2y88_A Phosphoribosyl isomeras 29.4 1.4E+02 0.0048 24.2 6.9 50 209-259 64-116 (244)
197 2zds_A Putative DNA-binding pr 29.3 2.5E+02 0.0087 23.5 11.5 21 79-99 18-38 (340)
198 3oa3_A Aldolase; structural ge 29.3 2.8E+02 0.0095 24.0 12.1 101 159-266 175-279 (288)
199 2hnh_A DNA polymerase III alph 29.2 31 0.0011 35.0 3.2 24 8-31 5-33 (910)
200 3a5f_A Dihydrodipicolinate syn 28.9 1.4E+02 0.0047 25.5 7.0 76 170-245 19-100 (291)
201 1o5k_A DHDPS, dihydrodipicolin 28.9 1.2E+02 0.004 26.2 6.6 77 169-245 29-111 (306)
202 3l12_A Putative glycerophospho 28.4 2.8E+02 0.0094 23.6 11.9 52 208-265 258-311 (313)
203 1tv8_A MOAA, molybdenum cofact 28.3 1.9E+02 0.0065 24.7 7.9 85 169-258 49-137 (340)
204 1gkr_A Hydantoinase, non-ATP d 28.2 49 0.0017 29.5 4.1 25 203-227 162-186 (458)
205 2ki0_A DS119; beta-alpha-beta, 27.4 48 0.0017 18.7 2.4 23 202-224 12-34 (36)
206 2fty_A Dihydropyrimidinase; al 27.4 66 0.0023 30.2 5.0 26 202-227 176-201 (559)
207 2ojp_A DHDPS, dihydrodipicolin 27.3 1.2E+02 0.004 26.0 6.2 66 170-235 19-87 (292)
208 3qxb_A Putative xylose isomera 27.3 1.4E+02 0.0046 25.3 6.7 19 80-98 39-57 (316)
209 4hb7_A Dihydropteroate synthas 27.3 1.7E+02 0.0058 25.1 7.1 87 179-268 33-130 (270)
210 2p10_A MLL9387 protein; putati 27.2 60 0.0021 28.2 4.2 42 199-243 144-185 (286)
211 3qfe_A Putative dihydrodipicol 27.2 1.3E+02 0.0046 26.1 6.7 90 157-246 13-111 (318)
212 3na8_A Putative dihydrodipicol 27.2 1.2E+02 0.0039 26.5 6.2 73 170-245 42-123 (315)
213 2r8w_A AGR_C_1641P; APC7498, d 27.0 1.5E+02 0.0051 26.0 6.9 76 170-245 52-133 (332)
214 2fvt_A Conserved hypothetical 26.7 40 0.0014 25.8 2.7 39 230-268 54-99 (135)
215 2qgq_A Protein TM_1862; alpha- 26.5 1.7E+02 0.0057 24.9 7.1 89 168-260 31-133 (304)
216 4dpp_A DHDPS 2, dihydrodipicol 26.4 1.8E+02 0.006 26.0 7.4 77 170-246 77-159 (360)
217 3e38_A Two-domain protein cont 26.2 35 0.0012 30.4 2.6 27 9-38 20-49 (343)
218 2pcq_A Putative dihydrodipicol 26.0 59 0.002 27.8 4.0 74 170-245 16-92 (283)
219 3s5o_A 4-hydroxy-2-oxoglutarat 25.5 1.3E+02 0.0046 25.9 6.3 73 171-246 33-114 (307)
220 3lmz_A Putative sugar isomeras 25.5 1.2E+02 0.004 24.7 5.8 107 154-266 14-129 (257)
221 1o12_A N-acetylglucosamine-6-p 25.4 28 0.00096 30.8 1.9 14 7-20 54-68 (376)
222 1f6k_A N-acetylneuraminate lya 25.4 1.5E+02 0.0051 25.3 6.6 76 170-245 21-103 (293)
223 1vk8_A Hypothetical protein TM 24.9 1.5E+02 0.0051 21.6 5.4 48 72-123 29-76 (106)
224 1zzm_A Putative deoxyribonucle 24.9 38 0.0013 27.9 2.5 28 7-37 3-33 (259)
225 3dnp_A Stress response protein 24.7 2.8E+02 0.0097 22.5 9.3 78 189-268 7-108 (290)
226 3mpo_A Predicted hydrolase of 24.5 2.8E+02 0.0095 22.4 8.5 50 190-241 7-60 (279)
227 1bxy_A Protein (ribosomal prot 24.4 1.3E+02 0.0045 19.5 4.6 43 219-261 4-49 (60)
228 2rfg_A Dihydrodipicolinate syn 24.4 1.3E+02 0.0045 25.8 6.0 73 170-245 18-99 (297)
229 2yw3_A 4-hydroxy-2-oxoglutarat 24.1 2.8E+02 0.0095 22.2 8.2 92 163-265 15-106 (207)
230 2gou_A Oxidoreductase, FMN-bin 24.1 3.7E+02 0.013 23.6 12.0 86 172-262 249-338 (365)
231 1vyr_A Pentaerythritol tetrani 23.6 3.8E+02 0.013 23.6 11.1 51 210-262 285-339 (364)
232 3ndo_A Deoxyribose-phosphate a 23.3 3.2E+02 0.011 22.7 10.6 85 157-246 127-217 (231)
233 2gm2_A Conserved hypothetical 23.1 39 0.0013 25.7 2.0 39 230-268 53-96 (132)
234 3dz1_A Dihydrodipicolinate syn 23.1 1.7E+02 0.0058 25.3 6.5 76 170-245 26-106 (313)
235 2ftp_A Hydroxymethylglutaryl-C 23.1 3.5E+02 0.012 23.0 9.9 94 170-267 27-141 (302)
236 3pm6_A Putative fructose-bisph 23.0 80 0.0027 27.7 4.2 77 170-249 172-252 (306)
237 3r8s_Z 50S ribosomal protein L 22.9 1.2E+02 0.0041 19.6 4.1 43 219-261 4-49 (58)
238 3f4w_A Putative hexulose 6 pho 22.8 2.5E+02 0.0085 22.0 7.1 96 161-266 2-106 (211)
239 1rqb_A Transcarboxylase 5S sub 22.8 4.8E+02 0.016 24.5 12.9 92 172-268 116-225 (539)
240 3hgj_A Chromate reductase; TIM 22.4 3.9E+02 0.013 23.3 17.5 163 70-261 143-333 (349)
241 2ftw_A Dihydropyrimidine amido 22.3 55 0.0019 30.3 3.3 25 202-226 169-193 (521)
242 2vc6_A MOSA, dihydrodipicolina 22.2 1.4E+02 0.0047 25.5 5.7 73 170-245 18-99 (292)
243 2hmc_A AGR_L_411P, dihydrodipi 22.0 2.2E+02 0.0076 25.0 7.1 76 170-245 44-122 (344)
244 3stp_A Galactonate dehydratase 22.0 4.3E+02 0.015 23.6 11.4 71 160-241 231-303 (412)
245 3cpk_A Uncharacterized protein 22.0 55 0.0019 25.6 2.7 23 246-268 95-120 (150)
246 1thf_D HISF protein; thermophI 21.8 3.2E+02 0.011 22.1 9.4 69 188-259 45-116 (253)
247 2ab1_A Hypothetical protein; H 21.7 58 0.002 24.4 2.7 39 230-268 50-94 (122)
248 1rvg_A Fructose-1,6-bisphospha 21.6 3.8E+02 0.013 23.3 8.3 56 170-227 153-211 (305)
249 1vzw_A Phosphoribosyl isomeras 21.6 1.8E+02 0.0063 23.5 6.2 50 209-259 65-117 (244)
250 1xpj_A Hypothetical protein; s 21.5 1.2E+02 0.0042 22.0 4.6 40 190-229 3-51 (126)
251 1wxm_A A-RAF proto-oncogene se 21.3 31 0.001 24.5 1.0 22 248-269 27-48 (86)
252 2hpi_A DNA polymerase III alph 21.3 52 0.0018 34.5 3.1 26 6-31 4-34 (1220)
253 3h5d_A DHDPS, dihydrodipicolin 21.1 2.1E+02 0.0071 24.7 6.6 64 171-234 26-92 (311)
254 3g23_A Peptidase U61, LD-carbo 21.0 2.4E+02 0.0081 24.0 6.9 56 159-225 68-125 (274)
255 3m9w_A D-xylose-binding peripl 20.8 2.5E+02 0.0085 23.1 7.0 51 169-226 41-91 (313)
256 3rcy_A Mandelate racemase/muco 20.7 4.7E+02 0.016 23.6 12.4 71 160-241 204-276 (433)
257 1k77_A EC1530, hypothetical pr 20.6 3.3E+02 0.011 21.7 11.2 19 79-97 18-36 (260)
258 3qc0_A Sugar isomerase; TIM ba 20.5 3.3E+02 0.011 21.8 13.3 19 79-97 21-39 (275)
259 3rot_A ABC sugar transporter, 20.5 3.4E+02 0.011 22.1 7.8 57 162-225 36-93 (297)
260 2isw_A Putative fructose-1,6-b 20.4 3.1E+02 0.011 24.1 7.6 92 171-265 154-250 (323)
261 2r91_A 2-keto-3-deoxy-(6-phosp 20.2 2.4E+02 0.0082 23.9 6.8 71 170-245 16-94 (286)
262 3g1w_A Sugar ABC transporter; 20.0 3.6E+02 0.012 21.9 8.3 58 162-226 37-94 (305)
No 1
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=100.00 E-value=6.2e-58 Score=425.59 Aligned_cols=234 Identities=26% Similarity=0.373 Sum_probs=212.9
Q ss_pred hhhhcCCcchhccccCCCCCHHHHHHHHHHhccCCCccc-hhhHHHHh--hcCCCHHHHHHHhHHHHHhhCCHHHHHHHH
Q 024296 2 EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVF-SDVEHVIM--KSDRSLHEVFKLFDLIHVLTTDHATVTRIT 78 (269)
Q Consensus 2 ~~i~~lPK~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~-~~~~~~~~--~~~~~l~~f~~~f~~~~~l~~~~~~~~~~~ 78 (269)
+||++|||+|||+||+||++|+|+++||++ +|++++ .+++.++. ....++.+|+..|. ..++++++++++++
T Consensus 24 ~Fi~~LPKvELH~HLdGsl~p~tl~~LA~~---~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~vl~t~ed~~r~a 98 (380)
T 4gxw_A 24 AFFHALPKVELHCHLLGAVRHDTFVALAQR---SGAPIERAEIDAFYARGEKPVGVLHVLRALD--RYLLTRPDDLRRIA 98 (380)
T ss_dssp HHHHHSCEEECCBBGGGCCCHHHHHHHHHH---HTCSCCTTHHHHHHCCCSSCCCSHHHHHHHH--HHTCCSHHHHHHHH
T ss_pred HHHHhChhHHhhcCCcCCCCHHHHHHHHHH---hCCCCCcccHHHHHHhhhccccHHHHHHHHH--HHHcCCHHHHHHHH
Confidence 699999999999999999999999999995 677664 35666653 23567888888876 34899999999999
Q ss_pred HHHHHHHHhcCCeEEEEecCCCCcc-cCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCC
Q 024296 79 QEVVEDFASENIVYLELRTTPKRNE-SIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKK 157 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr~~p~~~~-~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (269)
+++++++++|||+|+|+||+|..+. ..|++.+++++++++|++++.+ ++|
T Consensus 99 ~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~-----------------------------~~g 149 (380)
T 4gxw_A 99 YEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAAR-----------------------------DFG 149 (380)
T ss_dssp HHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHH-----------------------------HHC
T ss_pred HHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHH-----------------------------hcC
Confidence 9999999999999999999998875 4799999999999999998743 568
Q ss_pred ceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCCh-hHHHH
Q 024296 158 IYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNK-EEIQS 236 (269)
Q Consensus 158 i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~-e~i~~ 236 (269)
|.+|+|+|++|+.+++.+.++++++.++++++||||||+|+|.++|+..|.++|++||+.|+++|+||||.++| ++|++
T Consensus 150 i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~ 229 (380)
T 4gxw_A 150 IGARLIPSIDREQDPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVET 229 (380)
T ss_dssp CEEEEEEEEETTSCHHHHHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHH
T ss_pred CcEEEEEeecCCCCHHHHHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHcCCCeeeeccccCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998865 89999
Q ss_pred HHh-cCCCcccccccC--CHHHHHHHHhCCCceeeC
Q 024296 237 MLD-FLPQRIGHACCF--EEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 237 ai~-l~a~RIGHG~~~--~~~l~~~l~~~~I~lEic 269 (269)
|++ +|++|||||+++ +|++++++++++|+||||
T Consensus 230 al~~lga~RIgHG~~~~~d~~L~~~l~~~~I~lEvC 265 (380)
T 4gxw_A 230 AVDLLHVDRVDHGYTIVDNPELCARYAERGIVFTVV 265 (380)
T ss_dssp HHHTSCCSEEEECGGGGGCHHHHHHHHHHTCEEEEC
T ss_pred HHHHcCCcccccceeeccChHHHHHHHHhCceeEEC
Confidence 997 799999999987 799999999999999999
No 2
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=100.00 E-value=2.2e-55 Score=403.78 Aligned_cols=234 Identities=21% Similarity=0.302 Sum_probs=216.3
Q ss_pred hhhcCCcchhccccCCCCCHHHHHHHHHHhccCCCccc-hhhHHHHh-hcCCCHHHHHHHhHHHHHhhCCHHHHHHHHHH
Q 024296 3 WFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVF-SDVEHVIM-KSDRSLHEVFKLFDLIHVLTTDHATVTRITQE 80 (269)
Q Consensus 3 ~i~~lPK~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~-~~~~~~~~-~~~~~l~~f~~~f~~~~~l~~~~~~~~~~~~~ 80 (269)
++++|||+|||+||+||++|+|+++||++ +|+.++ .+++++.. ..+.+|++|++.|..+..++++++++++++++
T Consensus 9 ~~~~lPK~ELH~Hl~Gsl~p~tl~~la~~---~~~~lp~~~~~~l~~~~~~~~l~~fl~~f~~~~~vl~~~e~~~~~~~~ 85 (343)
T 3rys_A 9 TSTAPPVAELHLHIEGTLQPELIFALAER---NGIELPYEDIEELREKYEFTDLQSFLDLYYANMAVLQTEQDFTDMTRA 85 (343)
T ss_dssp CCSCCCEEECSBBGGGGCCHHHHHHHHHH---TTCCCSCSSHHHHHTTCCCSSHHHHHHHHHHHGGGCCSHHHHHHHHHH
T ss_pred hhhcCCceeeEecCccCCCHHHHHHHHHh---cCCCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 47999999999999999999999999995 677664 35555533 24789999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceE
Q 024296 81 VVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYV 160 (269)
Q Consensus 81 ~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 160 (269)
+++++++|||+|+|+||+|+.++..|++.+++++++.++++++++ ++||.+
T Consensus 86 ~l~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~-----------------------------~~gi~~ 136 (343)
T 3rys_A 86 YLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEE-----------------------------DFGVST 136 (343)
T ss_dssp HHHHHHHTTEEEEEEEECHHHHHTTTCCHHHHHHHHHHHHTTHHH-----------------------------HHSCEE
T ss_pred HHHHHHHCCCEEEEEEecHHHhccCCCCHHHHHHHHHHHHHHHhh-----------------------------cCceeE
Confidence 999999999999999999999888999999999999999998753 468999
Q ss_pred EEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-
Q 024296 161 RLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD- 239 (269)
Q Consensus 161 rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~- 239 (269)
|+|+|++|+.+++.+.+.+++|.++ +++||||||+|+|.++|+..|.++|+.|++.|+++|+||||+.+++++++|+.
T Consensus 137 ~lI~~~~R~~~~~~a~~~l~~a~~~-~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~ 215 (343)
T 3rys_A 137 LLIAAFLRDMSEDSALEVLDQLLAM-HAPIAGIGLDSAEVGNPPSKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDV 215 (343)
T ss_dssp EEEEEEETTSCHHHHHHHHHHHHHT-TCCCCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHT
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhC-CCCEEEEecCCcccCCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHHHHHHHhc
Confidence 9999999999999999999999998 56799999999999999999999999999999999999999999999999997
Q ss_pred cCCCcccccccC--CHHHHHHHHhCCCceeeC
Q 024296 240 FLPQRIGHACCF--EEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 240 l~a~RIGHG~~~--~~~l~~~l~~~~I~lEic 269 (269)
+|++|||||+++ +|+++++|++++|++|+|
T Consensus 216 lg~~rIgHgv~l~~d~~l~~~l~~~~i~le~c 247 (343)
T 3rys_A 216 LHVERIDHGIRCMEDTDVVQRLVAEQVPLTVC 247 (343)
T ss_dssp SCCSEEEECGGGGGCHHHHHHHHHHTCCEEEC
T ss_pred CCcceeeeeeeecCChHHHHHHHhcCCCeeEc
Confidence 899999999997 479999999999999999
No 3
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=100.00 E-value=1.4e-55 Score=402.62 Aligned_cols=235 Identities=25% Similarity=0.339 Sum_probs=217.9
Q ss_pred hhhhcCCcchhccccCCCCCHHHHHHHHHHhccCCCccc-hhhHHHHh-hcCCCHHHHHHHhHHHHHhhCCHHHHHHHHH
Q 024296 2 EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVF-SDVEHVIM-KSDRSLHEVFKLFDLIHVLTTDHATVTRITQ 79 (269)
Q Consensus 2 ~~i~~lPK~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~-~~~~~~~~-~~~~~l~~f~~~f~~~~~l~~~~~~~~~~~~ 79 (269)
+|+++|||+|||+||+||++|+|+++||++ +|+.++ ++++++.. ..+.+|++||+.|.....+++++++++++++
T Consensus 5 ~~~~~lPK~ELH~Hl~Gsl~~~t~~~la~~---~~~~lp~~~~~~l~~~~~~~~l~~fl~~~~~~~~vl~t~ed~~~~a~ 81 (326)
T 3pao_A 5 EWLNALPKAELHLHLEGTLEPELLFALAER---NRIALPWNDVETLRKAYAFNNLQEFLDLYYAGADVLRTEQDFYDLTW 81 (326)
T ss_dssp HHHHHSCEEECSBBGGGGCCHHHHHHHHHH---TTCCCSSSSHHHHHHTCCCSSHHHHHHHHHHHGGGCCSHHHHHHHHH
T ss_pred HHHHhCCceEEEecccCCCCHHHHHHHHHh---cCCCCCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 689999999999999999999999999995 777664 35555543 3568999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCce
Q 024296 80 EVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIY 159 (269)
Q Consensus 80 ~~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 159 (269)
++++++++|||+|+|+||+|+.++..|++.+++++++.++++++++ ++||.
T Consensus 82 ~~~~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~-----------------------------~~gi~ 132 (326)
T 3pao_A 82 AYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEK-----------------------------LLGIR 132 (326)
T ss_dssp HHHHHHHHTTEEEECCEECHHHHHTTTCCHHHHHHHHHHHHHHHHH-----------------------------HHCCE
T ss_pred HHHHHHHHcCCeEEEEEEChHHhccCCCCHHHHHHHHHHHHHHHHh-----------------------------hCceE
Confidence 9999999999999999999999888999999999999999998754 46899
Q ss_pred EEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh
Q 024296 160 VRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD 239 (269)
Q Consensus 160 ~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~ 239 (269)
+|+|+|++|+.+++.+.+.+++|.++++ +||||||+|+|.++|++.|.++|+.|++.|+++|+||||+.+++++++|+.
T Consensus 133 ~~lI~~~~R~~~~~~a~~~~~~a~~~~~-~vvG~dL~g~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~ 211 (326)
T 3pao_A 133 HGLILSFLRHLSEEQAQKTLDQALPFRD-AFIAVGLDSSEVGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALD 211 (326)
T ss_dssp ECCEEEEETTSCHHHHHHHHHHHGGGGG-GCSEEEEESCCTTCCGGGGHHHHHHHHHTTCEECEEESSSSCHHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHhhccc-cceeeCCCCCCCCCCHHHHHHHHHHHHHcCCceeeecCCCCCHHHHHHHHh
Confidence 9999999999999999999999999865 799999999999999999999999999999999999999999999999996
Q ss_pred -cCCCcccccccCC--HHHHHHHHhCCCceeeC
Q 024296 240 -FLPQRIGHACCFE--EEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 240 -l~a~RIGHG~~~~--~~l~~~l~~~~I~lEic 269 (269)
+|++|||||+.+. |+++++|++++|++|+|
T Consensus 212 ~lg~~rigHgv~l~~d~~l~~~l~~~~i~le~c 244 (326)
T 3pao_A 212 LLKVERIDHGVRAFEDERLMRRLIDEQIPLTVC 244 (326)
T ss_dssp TTCCSSEEECGGGGGCHHHHHHHHHHTCCEEEC
T ss_pred cCCCceeeeeeeecccHHHHHHHHHcCCeEEEC
Confidence 8999999999884 88999999999999999
No 4
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=100.00 E-value=1.2e-53 Score=395.16 Aligned_cols=232 Identities=26% Similarity=0.393 Sum_probs=208.0
Q ss_pred hcCCcchhccccCCCCCHHHHHHHHHHhccCCCccc-hhhHHH---Hh-hcCCCHHHHHHHhHHHHHhhC-CHHHHHHHH
Q 024296 5 ASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVF-SDVEHV---IM-KSDRSLHEVFKLFDLIHVLTT-DHATVTRIT 78 (269)
Q Consensus 5 ~~lPK~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~-~~~~~~---~~-~~~~~l~~f~~~f~~~~~l~~-~~~~~~~~~ 78 (269)
.+|||+|||+||+||++|+|+++||++ +|+.++ .+++++ +. ..+.+|++||+.|.....+++ +++++++++
T Consensus 4 ~~lPK~ELH~HL~Gsl~p~tl~~La~~---~~~~lp~~~~~~l~~~~~~~~~~~L~~fl~~f~~~~~vl~~~~edl~~~a 80 (367)
T 3iar_A 4 FDKPKVELHVHLDGSIKPETILYYGRR---RGIALPANTAEGLLNVIGMDKPLTLPDFLAKFDYYMPAIAGCREAIKRIA 80 (367)
T ss_dssp CCSCEEECCBBGGGSCCHHHHHHHHHH---HTCCCSCSSHHHHHHHHCCSSCCCHHHHHGGGGGTHHHHTTCHHHHHHHH
T ss_pred CCCCeeEeeecccCCCCHHHHHHHHHh---cCCCCCcCCHHHHHHHhccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 489999999999999999999999996 677654 344443 32 356899999999997666665 899999999
Q ss_pred HHHHHHHHhcCCeEEEEecCCCCcccC------------CCCHHHHHHHHHHHHHhhhhccccccccccccccccccccc
Q 024296 79 QEVVEDFASENIVYLELRTTPKRNESI------------GMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNM 146 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr~~p~~~~~~------------g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (269)
+++++++++|||+|+|+||+|+.++.+ |++.+++++++.++++++.+
T Consensus 81 ~e~~ed~a~dgV~Y~Eir~~P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~--------------------- 139 (367)
T 3iar_A 81 YEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGER--------------------- 139 (367)
T ss_dssp HHHHHHHHTTTEEEEEEEECGGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHH---------------------
T ss_pred HHHHHHHHHcCCEEEEEEecHHHhhhccccccccccccCCCCHHHHHHHHHHHHHHHHH---------------------
Confidence 999999999999999999999987754 89999999999999998743
Q ss_pred cccccCCCCCCceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCCh---hhHHHHHHHHHHcCCceee
Q 024296 147 NDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEW---TTFLPALKFAREQGLQITL 223 (269)
Q Consensus 147 ~~~~~~~~~~~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~---~~f~~~f~~ar~~gl~~t~ 223 (269)
++||.+|+|+|++|+.+. .+.++++++.++++++||||||+|+|..+++ ..|.++|+.|++.|+++|+
T Consensus 140 --------~~gi~~~lI~~~~R~~~~-~a~e~~~la~~~~~~~vvG~dL~g~E~~~~~~~~~~f~~~f~~A~~~gl~~~~ 210 (367)
T 3iar_A 140 --------DFGVKARSILCCMRHQPN-WSPKVVELCKKYQQQTVVAIDLAGDETIPGSSLLPGHVQAYQEAVKSGIHRTV 210 (367)
T ss_dssp --------HHCCEEEEEEEEETTCGG-GHHHHHHHHHHTTTTTEEEEEEESCTTSTTGGGCHHHHHHHHHHHHHTCEEEE
T ss_pred --------hcCCeEEEEEEeCCCCCH-HHHHHHHHHHhhCCCCEEEEcCCCcccCCCcchHHHHHHHHHHHHHcCCeeEE
Confidence 568999999999999854 6789999999998889999999999999987 7899999999999999999
Q ss_pred ecCCCCChhHHHHHHh-cCCCcccccccC--CHHHHHHHHhCCCceeeC
Q 024296 224 HCGEIPNKEEIQSMLD-FLPQRIGHACCF--EEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 224 HAGE~~~~e~i~~ai~-l~a~RIGHG~~~--~~~l~~~l~~~~I~lEic 269 (269)
||||+.+++++++|+. +|++|||||+++ +|+++++|++++|++|+|
T Consensus 211 HagE~~~~~~i~~al~~lg~~RIgHgv~l~~d~~l~~~l~~~~i~le~c 259 (367)
T 3iar_A 211 HAGEVGSAEVVKEAVDILKTERLGHGYHTLEDQALYNRLRQENMHFEIC 259 (367)
T ss_dssp EESSSSCHHHHHHHHHTSCCSEEEECGGGGGCHHHHHHHHHTTCEEEEC
T ss_pred ecCCcCChHHHHHHHHccCCceeeeeeeecCCHHHHHHHHhCCcEEEEC
Confidence 9999999999999996 899999999987 689999999999999999
No 5
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=100.00 E-value=1.4e-44 Score=335.71 Aligned_cols=235 Identities=20% Similarity=0.312 Sum_probs=208.1
Q ss_pred hhhhcCCcchhccccCCCCCHHHHHHHHHHhccCCCccc---hhhHHHHh--hcCCCHHHHHHHhHHHHHhhCCHHHHHH
Q 024296 2 EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVF---SDVEHVIM--KSDRSLHEVFKLFDLIHVLTTDHATVTR 76 (269)
Q Consensus 2 ~~i~~lPK~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~---~~~~~~~~--~~~~~l~~f~~~f~~~~~l~~~~~~~~~ 76 (269)
+||++|||+|||+||+||++++|+++|+++ +|+... +++..++. ..+.+|.+|++.|.....++.+++++++
T Consensus 39 ~~~~~lPK~eLH~Hl~gsl~~~~l~~la~~---~~~~p~~~~~~l~~~~~~~~~~~~L~~~l~~~~~~~~~~~t~ed~~~ 115 (371)
T 2pgf_A 39 KIWKRIPKCELHCHLDLCFSADFFVSCIRK---YNLQPNLSDEEVLDYYLFAKGGKSLGEFVEKAIKVADIFHDYEVIED 115 (371)
T ss_dssp HHHHHSCEEEEEEEGGGCCCHHHHHHHHHH---TTCCTTSCHHHHHHHHCCTTCCSCHHHHHHHHHHHGGGCCSHHHHHH
T ss_pred HHHHhCcHhhheeCCccCCCHHHHHHHHHH---cCCCCCCCHHHHHHHHhcccCCCCHHHHHHHHHHHHHHhCCHHHHHH
Confidence 579999999999999999999999999996 565411 22233322 3567999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEEecCCCC-cccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCC
Q 024296 77 ITQEVVEDFASENIVYLELRTTPKR-NESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRG 155 (269)
Q Consensus 77 ~~~~~~~~~~~dnV~Y~Elr~~p~~-~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (269)
.+++++++++++||.|+|+|++|.. +...|++.+++++++.+++++++++ ..
T Consensus 116 ~a~~~l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~---------------------------~~ 168 (371)
T 2pgf_A 116 LAKHAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVEL---------------------------LD 168 (371)
T ss_dssp HHHHHHHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHH---------------------------TT
T ss_pred HHHHHHHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHH---------------------------cc
Confidence 9999999999999999999999976 6788999999999999999987541 12
Q ss_pred CCceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCC--CCh-h
Q 024296 156 KKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEI--PNK-E 232 (269)
Q Consensus 156 ~~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~--~~~-e 232 (269)
.||.+++|+|+.|+.+++.+.+.++.+.+ .+++++|||++|+|.. ++.|.++|+.|++.|+++++||||+ +++ +
T Consensus 169 ~gi~~~li~~~~r~~~~~~~~~~~~~a~~-~~~~vvg~dl~g~e~~--~~~~~~~~~~A~~~gl~~~~HagE~~~~~~~~ 245 (371)
T 2pgf_A 169 HKIHVALMCIGDTGHEAANIKASADFCLK-HKADFVGFDHGGHEVD--LKEYKEIFDYVRESGVPLSVHAGEDVTLPNLN 245 (371)
T ss_dssp TSSEEEEEEEEEESSTTCCHHHHHHHHHH-TTTTEEEEEEEESCCC--GGGGHHHHHHHHHTTCCBEEEESCCTTSSSSH
T ss_pred CCCEEEEEEEecCCCCHHHHHHHHHHHHh-CCCCEEEEecCCCccc--HHHHHHHHHHHHHcCCcEEEeeCCCCCCCchH
Confidence 38999999999999888888999999988 6778999999999987 8899999999999999999999999 788 8
Q ss_pred HHHHHHh-cCCCcccccccC--CHHHHHHHHhCCCceeeC
Q 024296 233 EIQSMLD-FLPQRIGHACCF--EEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 233 ~i~~ai~-l~a~RIGHG~~~--~~~l~~~l~~~~I~lEic 269 (269)
++++++. +|++|||||+.+ +|.++++|++++|++|+|
T Consensus 246 ~i~~al~~lg~~ri~Hgv~l~~~~~l~~~l~~~~i~v~~c 285 (371)
T 2pgf_A 246 TLYSAIQVLKVERIGHGIRVAESQELIDMVKEKNILLEVC 285 (371)
T ss_dssp HHHHHHHTSCCSEEEECGGGGGCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHhccCCCEEecchhccccHHHHHHHHHcCCeEEEC
Confidence 9999998 599999999998 567899999999999999
No 6
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=100.00 E-value=1.7e-43 Score=338.10 Aligned_cols=241 Identities=18% Similarity=0.265 Sum_probs=199.8
Q ss_pred hhhhcCCc-chhccccCCCCCHHHHHHHHHHhc-------cCCC---------c----------cch----------hhH
Q 024296 2 EWFASMPK-VELHAHLNGSIRDSTLLELARVLG-------EKGV---------I----------VFS----------DVE 44 (269)
Q Consensus 2 ~~i~~lPK-~eLH~HL~Gs~~~~tl~~la~~~~-------~~g~---------~----------~~~----------~~~ 44 (269)
+++++||| +-||+|+++++++++|++.+.... .+|. + ..+ .++
T Consensus 74 ~i~~~MPKGa~LH~H~~a~~~~d~li~~~~~~~~~~i~~~~~~~~~f~f~~~~p~~~~~~~~w~~~~~~r~~~~~~~~f~ 153 (508)
T 3lgd_A 74 NILRMMPKGAALHLHDIGIVTMDWLVRNVTYRPHCHICFTPRGIMQFRFAHPTPRPSEKCSKWILLEDYRKRVQNVTEFD 153 (508)
T ss_dssp HHHHHSCCEEEEEEETTSSSCHHHHHHTGGGSTTEEEEECTTCCEEEEECSSCCCCCSSCSCCEEHHHHHHSCSCHHHHH
T ss_pred HHHHHCCCcccccccccccCCHHHHHHHHhcCCCeEEEecCCCceEEEecCCCCCCCCCCCCchhHHHHHHHcCCHHHHH
Confidence 57899999 799999999999999999665421 0110 0 000 111
Q ss_pred HHHhh-----------c----CCCHHHHHHHhHHHHHhhCCHHHHHHHHHHHHHHHHhcCCeEEEEecC--CCCcc-cCC
Q 024296 45 HVIMK-----------S----DRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTT--PKRNE-SIG 106 (269)
Q Consensus 45 ~~~~~-----------~----~~~l~~f~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~dnV~Y~Elr~~--p~~~~-~~g 106 (269)
.+..+ . ...|.+|++.|..+..+++++++++++++++++++++|||+|+|+|++ |..+. ..|
T Consensus 154 ~~l~~~~~l~~~~~~~~~~~~~~~w~~F~~~f~~~~~ll~~~~~~~~~~~e~l~d~a~dgV~Y~ElR~~f~p~~~~~g~~ 233 (508)
T 3lgd_A 154 DSLLRNFTLVTQHPEVIYTNQNVVWSKFETIFFTISGLIHYAPVFRDYVFRSMQEFYEDNVLYMEIRARLLPVYELSGEH 233 (508)
T ss_dssp HHHHHHSCCCCSCHHHHCCSHHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCCBCTTSCB
T ss_pred HHHHHhcccccCCcccccCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCceEEEEeecCchHhhccCCC
Confidence 22110 0 135789999999999999999999999999999999999999999955 54443 356
Q ss_pred CCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceEEEEEEEeCCCCHHHHHHHHHHHHhhC
Q 024296 107 MSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMR 186 (269)
Q Consensus 107 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~~~R~~~~~~~~~~~~~a~~~~ 186 (269)
++.+++++++.++++++++. ...+|.+|+|+|++|+.+++.+.+++++|.+++
T Consensus 234 l~~~~vv~~v~~~~~~~~~~---------------------------~~~fI~~rlI~~~~R~~~~e~a~e~l~~a~~~~ 286 (508)
T 3lgd_A 234 HDEEWSVKTYQEVAQKFVET---------------------------HPEFIGIKIIYSDHRSKDVAVIAESIRMAMGLR 286 (508)
T ss_dssp CCHHHHHHHHHHHHHHHHHH---------------------------CTTCCEEEEEEEEETTSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHh---------------------------cCCceEEEEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999988641 111389999999999999999999999999875
Q ss_pred ---CCceEEEecCCCCCC-CChhhHHHHHHH--HHHcCCceeeecCCCCC-----hhHHHHHHhcCCCcccccccC--CH
Q 024296 187 ---DLGVVGIDLSGNPTK-GEWTTFLPALKF--AREQGLQITLHCGEIPN-----KEEIQSMLDFLPQRIGHACCF--EE 253 (269)
Q Consensus 187 ---~~~vvGidl~G~E~~-~~~~~f~~~f~~--ar~~gl~~t~HAGE~~~-----~e~i~~ai~l~a~RIGHG~~~--~~ 253 (269)
+++||||||+|+|.. .|+..|.++|+. |++.|+++|+||||+.+ +++|++|+.+|++|||||+.+ +|
T Consensus 287 ~~~~~~VvG~DLaG~E~~g~p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~~i~~Al~Lga~RIgHGv~l~~dp 366 (508)
T 3lgd_A 287 IKFPTVVAGFDLVGHEDTGHSLHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDALMLNTTRIGHGFALSKHP 366 (508)
T ss_dssp HHCTTTEEEEEEESCTTTSCCTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTTHHHHHHHTTCSSEEECTTGGGCH
T ss_pred hhCCCceEEeccCCCCCCCCCHHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHHHHHHHHhcCCceeeeeEecCccH
Confidence 578999999999974 578899999999 88899999999999863 689999999999999999998 58
Q ss_pred HHHHHHHhCCCceeeC
Q 024296 254 EEWRKLKSSKIPVRIS 269 (269)
Q Consensus 254 ~l~~~l~~~~I~lEic 269 (269)
++++++++++|+||+|
T Consensus 367 ~l~~~l~~~~I~levC 382 (508)
T 3lgd_A 367 AVRTYSWKKDIPIEVC 382 (508)
T ss_dssp HHHHHHHHTTCCEEEC
T ss_pred HHHHHHHhcCCeEEEC
Confidence 9999999999999999
No 7
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=100.00 E-value=4.6e-35 Score=287.87 Aligned_cols=229 Identities=18% Similarity=0.192 Sum_probs=158.6
Q ss_pred hhhhcCCcchhccccCCCCCHHHHHHHHHHhcc-CCCc-c-c-----hhhHHHHhh-----------------c---CCC
Q 024296 2 EWFASMPKVELHAHLNGSIRDSTLLELARVLGE-KGVI-V-F-----SDVEHVIMK-----------------S---DRS 53 (269)
Q Consensus 2 ~~i~~lPK~eLH~HL~Gs~~~~tl~~la~~~~~-~g~~-~-~-----~~~~~~~~~-----------------~---~~~ 53 (269)
+|. +.||||||+||+||+++++|++++++..+ .+-. + . .++++++.. + ...
T Consensus 243 dFy-~~~KVDlHvHLsg~m~~~~LLefik~k~~~~pd~vv~~~~Gk~~TL~evF~~~~l~~ydltvd~L~~~ad~~~F~r 321 (701)
T 2a3l_A 243 DFY-NVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLREVFESLDLTGYDLNVDLLDVHADKSTFHR 321 (701)
T ss_dssp CTT-TSCEEEEEEETTTCSCHHHHHHHHHHHHHTCCSCCCEEETTEEECHHHHHHHHSSCSTTCCSTTCCCCSCSSCCCC
T ss_pred ccc-cCCccceeecccCCCCHHHHHHHHHhhccCCCCceEecCCCCcccHHHHHHHcCCccccccccccccccccchhhh
Confidence 454 45999999999999999999999875211 1100 0 0 012221110 0 011
Q ss_pred HH------------HHHHHhHHHHHhhCCHHHHHHHHHHHHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHH
Q 024296 54 LH------------EVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121 (269)
Q Consensus 54 l~------------~f~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~ 121 (269)
|+ ++.+.|......+ +.+.++++++++++++++|||+|+|+|++|.. ..+.. ++.+.+++.
T Consensus 322 Fd~Fn~kynp~g~~~LreiFlktdn~i-~~e~l~ri~~evled~a~dgV~Y~ElR~sp~~--~~~~~----~~~l~~~v~ 394 (701)
T 2a3l_A 322 FDKFNLKYNPCGQSRLREIFLKQDNLI-QGRFLGEITKQVFSDLEASKYQMAEYRISIYG--RKMSE----WDQLASWIV 394 (701)
T ss_dssp CSSSHHHHCCSSCCHHHHHHSCSSSTT-TTTTHHHHHHHHHHHHTTSSSEEEEEEEECCS--SSSTH----HHHHHHHHH
T ss_pred hcccccccChhhHHHHHHHHHHhcccc-cHHHHHHHHHHHHHHHHHcCCeEEEEEecccc--CCCCc----HHHHHHHHH
Confidence 11 2222232222223 56789999999999999999999999999943 33444 444445554
Q ss_pred hhhhccccccccccccccccccccccccccCCCCCCceEEEEEEEeCCCCHHHHHHH---------------HHH-----
Q 024296 122 AVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMET---------------VKL----- 181 (269)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~~~R~~~~~~~~~~---------------~~~----- 181 (269)
+. ...++.+|+|+++.|..++..+... ++.
T Consensus 395 ~~------------------------------~~~~~~vr~ii~i~R~~~~~~a~~~v~~F~~~l~nIF~PL~e~t~~p~ 444 (701)
T 2a3l_A 395 NN------------------------------DLYSENVVWLIQLPRLYNIYKDMGIVTSFQNILDNIFIPLFEATVDPD 444 (701)
T ss_dssp TT------------------------------TCCCSSEEEEEEEECCHHHHTTSSSCSSTHHHHHHHSSHHHHHHHCGG
T ss_pred hc------------------------------CccCcceEEEEEeecccCHHHhcChHHHHHHHHHhhhhHHHHhhcCcc
Confidence 32 1237889999999999776543222 222
Q ss_pred ---HHhhCCCceEEEecCCCCCCC---------ChhhH------------------HHHHHHHHH-cCC---ceeeecCC
Q 024296 182 ---ALEMRDLGVVGIDLSGNPTKG---------EWTTF------------------LPALKFARE-QGL---QITLHCGE 227 (269)
Q Consensus 182 ---a~~~~~~~vvGidl~G~E~~~---------~~~~f------------------~~~f~~ar~-~gl---~~t~HAGE 227 (269)
+..+.+++||||||+|+|.++ +|..| +.++..||+ .|+ ++++||||
T Consensus 445 ~~~~l~~~~~~VvGfDL~G~E~~~~~~~~~~~~pp~~~~~~f~p~~~yy~Yy~yan~~~Ln~ar~~~Gl~~i~~t~HaGE 524 (701)
T 2a3l_A 445 SHPQLHVFLKQVVGFDLVDDESKPERRPTKHMPTPAQWTNAFNPAFSYYVYYCYANLYVLNKLRESKGMTTITLRPHSGE 524 (701)
T ss_dssp GSTTTHHHHTTEEEEEEESCTTSCCCCCCSSCCCTTTCCSSSCCCHHHHHHHHHHHHHHHHHHHTTTTCCCCEECCCCSS
T ss_pred cCHHHHhcCCCEEEEEeecCCCcccccccccCCChHHcccccccHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcccccCC
Confidence 233445679999999999976 44332 344567886 687 89999999
Q ss_pred CCChhHHHHHHhcCCCcccccccC--CHHHHHHHHhCCCceeeC
Q 024296 228 IPNKEEIQSMLDFLPQRIGHACCF--EEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 228 ~~~~e~i~~ai~l~a~RIGHG~~~--~~~l~~~l~~~~I~lEic 269 (269)
+.+++++++++ +|++|||||+.+ +|.+++++++++|+||+|
T Consensus 525 ~~~~e~l~~al-Lg~~RIgHGv~l~edp~Li~lla~~~I~vevC 567 (701)
T 2a3l_A 525 AGDIDHLAATF-LTCHSIAHGINLRKSPVLQYLYYLAQIGLAMS 567 (701)
T ss_dssp SSCTHHHHHHH-HHCSSCSCCGGGGGCHHHHHHHHHHTCCEEEC
T ss_pred CCCHHHHHHHh-cCCCeEEEEeecccCHHHHHHHHHcCCcEEEC
Confidence 99999999998 999999999988 578899999999999999
No 8
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=98.75 E-value=2.6e-07 Score=85.94 Aligned_cols=169 Identities=10% Similarity=0.049 Sum_probs=105.7
Q ss_pred CHHHHHHHhHHHH-HhhCCHHHHHHHHHHHHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhcccccc
Q 024296 53 SLHEVFKLFDLIH-VLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFA 131 (269)
Q Consensus 53 ~l~~f~~~f~~~~-~l~~~~~~~~~~~~~~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~ 131 (269)
++.+++..+.... .-..++++++..+...+.++.+.||.++--.+. ..+ .+.++..+.
T Consensus 88 ~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---------~~~----~~~~a~~~~-------- 146 (451)
T 4dyk_A 88 PLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMYF---------YPQ----AICGVVHDS-------- 146 (451)
T ss_dssp CHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECS---------CHH----HHHHHHHHH--------
T ss_pred CHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc---------CHH----HHHHHHHHc--------
Confidence 4555665543322 225678899999999999999999998832211 122 233333321
Q ss_pred ccccccccccccccccccccCCCCCCceEEEEEEEeC-C----CCH-HHHHHHHHHHHhhCCCceEEEecCCCCC-CCCh
Q 024296 132 SRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDR-R----ETT-EAAMETVKLALEMRDLGVVGIDLSGNPT-KGEW 204 (269)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~~~R-~----~~~-~~~~~~~~~a~~~~~~~vvGidl~G~E~-~~~~ 204 (269)
|+...+..++.- . .+. +...+..++...+...+.+++.++.... ..++
T Consensus 147 -------------------------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 201 (451)
T 4dyk_A 147 -------------------------GVRAQVAIPVLDFPIPGARDSAEAIRQGMALFDDLKHHPRIRIAFGPHAPYTVSD 201 (451)
T ss_dssp -------------------------TCEEEEEEEECSSCBTTBSSHHHHHHHHHHHHHHTTTCSSEEEEEEECCGGGSCH
T ss_pred -------------------------CCeEEEEchhhCCCCccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCccCH
Confidence 333333333321 1 122 3333444444455555566666543222 2356
Q ss_pred hhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCCC---------------cccccccCCHHHHHHHHhCCCceee
Q 024296 205 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQ---------------RIGHACCFEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a~---------------RIGHG~~~~~~l~~~l~~~~I~lEi 268 (269)
+.+..+++.|++.|+++++|++|. .+.+..+++ +|.+ +|.|++.++++.+++++++++.+.+
T Consensus 202 ~~l~~~~~~A~~~g~~v~~H~~e~--~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~l~~~g~~v~~ 279 (451)
T 4dyk_A 202 DKLEQILVLTEELDASIQMHVHET--AFEVEQAMERNGERPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIH 279 (451)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCC--HHHHHHHHHHHSSCHHHHHHHTTCCSTTEEEEECCCCCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCC--HHHHHHHHHHhCCCHHHHHHHCCCCCCCeEEEECCCCCHHHHHHHHHcCCEEEE
Confidence 788999999999999999999995 344444443 2322 4779999999999999999999988
Q ss_pred C
Q 024296 269 S 269 (269)
Q Consensus 269 c 269 (269)
|
T Consensus 280 ~ 280 (451)
T 4dyk_A 280 C 280 (451)
T ss_dssp C
T ss_pred C
Confidence 7
No 9
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=98.72 E-value=4e-07 Score=85.40 Aligned_cols=200 Identities=13% Similarity=0.094 Sum_probs=119.2
Q ss_pred CCc-chhccccCCCCCHHHHHHHHHHhccCCCccchhhHHHHhhcCCCHHHHHHHhHHHHHhhCCHHHHHHHHHHHHHHH
Q 024296 7 MPK-VELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDF 85 (269)
Q Consensus 7 lPK-~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~~~~~~~~~~~~~~l~~f~~~f~~~~~l~~~~~~~~~~~~~~~~~~ 85 (269)
||- +|.|+|+.++... |... ....++.+++..+..+... .++++++..++..+.++
T Consensus 86 ~PGlID~H~Hl~~~~~r-------------g~~~---------~~~~~l~~~l~~~~~~~~~-~~~e~~~~~~~~~~~~~ 142 (479)
T 3h4u_A 86 IPGLVNTHHHMYQSLTR-------------AVPA---------AQNAELFGWLTNLYKIWAH-LTPEMIEVSTLTAMAEL 142 (479)
T ss_dssp EECEEECCCCGGGGGSC-------------SCTT---------TTTCCHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHH
T ss_pred ecceeecccccchhhhc-------------cccc---------cCCCCHHHHHHHhhhhhhh-CCHHHHHHHHHHHHHHH
Confidence 676 8999999765321 1100 0124566666655323333 57889999999999999
Q ss_pred HhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceEEEEEE
Q 024296 86 ASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLS 165 (269)
Q Consensus 86 ~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~ 165 (269)
.+.||.++.-...... .+.. ++.+.++.++. |+.+.+...
T Consensus 143 l~~GvTtv~d~~~~~~---~~~~----~~~~~~~~~~~---------------------------------g~r~~~~~~ 182 (479)
T 3h4u_A 143 LQSGCTTSSDHLYIYP---NGSR----LDDSIGAAQRI---------------------------------GMRFHASRG 182 (479)
T ss_dssp HTTTEEEEECCBCCCC---TTCC----HHHHHHHHHHH---------------------------------TCEEEEEEE
T ss_pred HhCCeEEEEECccccC---Ccch----HHHHHHHHHHc---------------------------------CCEEEEEee
Confidence 9999999987532211 1222 34444444332 222222221
Q ss_pred EeC--------------CCCHHHHHHHHHHHHhhCC---CceEEEecCCC-CCCCChhhHHHHHHHHHHcCCceeeecCC
Q 024296 166 IDR--------------RETTEAAMETVKLALEMRD---LGVVGIDLSGN-PTKGEWTTFLPALKFAREQGLQITLHCGE 227 (269)
Q Consensus 166 ~~R--------------~~~~~~~~~~~~~a~~~~~---~~vvGidl~G~-E~~~~~~~f~~~f~~ar~~gl~~t~HAGE 227 (269)
... ....+...+..++...+.. .+++.+.++.. +...+++.+..+++.|++.|+++++|++|
T Consensus 183 ~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e 262 (479)
T 3h4u_A 183 AMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAE 262 (479)
T ss_dssp ECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTSSCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred ecccccccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 111 0112222233333333333 35666666542 33446688999999999999999999999
Q ss_pred CCCh-h---------HHHHHHhcCC----CcccccccCCHHHHHHHHhCCCceeeC
Q 024296 228 IPNK-E---------EIQSMLDFLP----QRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 228 ~~~~-e---------~i~~ai~l~a----~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
.... + .+.-+.++|. .+|+||+.++++.+++++++++.+.+|
T Consensus 263 ~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~v~~~ 318 (479)
T 3h4u_A 263 NVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHC 318 (479)
T ss_dssp SHHHHHC-------CHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEEC
T ss_pred CHHHHHHHHHHcCCCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEC
Confidence 6421 1 1222222332 259999999999999999999999887
No 10
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=98.54 E-value=2.7e-06 Score=78.82 Aligned_cols=169 Identities=11% Similarity=0.042 Sum_probs=101.6
Q ss_pred CHHHHHHHhHHHH-HhhCCHHHHHHHHHHHHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhcccccc
Q 024296 53 SLHEVFKLFDLIH-VLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFA 131 (269)
Q Consensus 53 ~l~~f~~~f~~~~-~l~~~~~~~~~~~~~~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~ 131 (269)
++.+++..+.+.. .-..++++++..+...+.++.+.||.++.-.+. ..+ .+.++..+.
T Consensus 86 ~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~---------~~~----~~~~~~~~~-------- 144 (447)
T 4f0r_A 86 ALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYF---------YNA----AVARAGLAS-------- 144 (447)
T ss_dssp CHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECBS---------CHH----HHHHHHHHH--------
T ss_pred CHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc---------CHH----HHHHHHHHc--------
Confidence 3445554443221 224678889999999999999999998875321 222 233333221
Q ss_pred ccccccccccccccccccccCCCCCCceEEEEEEEeC-----CCCHHHHHHH-HHHHHhhCCCceEEEecCCC-CCCCCh
Q 024296 132 SRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDR-----RETTEAAMET-VKLALEMRDLGVVGIDLSGN-PTKGEW 204 (269)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~~~R-----~~~~~~~~~~-~~~a~~~~~~~vvGidl~G~-E~~~~~ 204 (269)
++.+.+...+.- ..+.+...+. .++..++.....+.+.++.. +...++
T Consensus 145 -------------------------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 199 (447)
T 4f0r_A 145 -------------------------GMRTFVGCSILEFPTNYASNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSD 199 (447)
T ss_dssp -------------------------TCEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHTTTTCTTEEEEEEECCGGGSCH
T ss_pred -------------------------CCeEEEEchhcCCCcccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCCH
Confidence 223322222221 1123333333 33333343434555544322 223456
Q ss_pred hhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCCC---------------cccccccCCHHHHHHHHhCCCceee
Q 024296 205 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQ---------------RIGHACCFEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a~---------------RIGHG~~~~~~l~~~l~~~~I~lEi 268 (269)
+.+..+++.|++.|+++.+|+.|. .+.+..++. +|.+ ++.|++.++++.++++++.++.+.+
T Consensus 200 ~~l~~~~~~A~~~g~~v~iH~~~~--~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 277 (447)
T 4f0r_A 200 DTFRKVVTLAEQEDMLIHCHIHET--ADEVNNSVKEHGQRPLARLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAH 277 (447)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCC--HHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEE
Confidence 789999999999999999999985 344444443 3433 3559999999999999999999887
Q ss_pred C
Q 024296 269 S 269 (269)
Q Consensus 269 c 269 (269)
|
T Consensus 278 ~ 278 (447)
T 4f0r_A 278 N 278 (447)
T ss_dssp C
T ss_pred C
Confidence 6
No 11
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=98.49 E-value=5.3e-06 Score=77.43 Aligned_cols=169 Identities=11% Similarity=0.081 Sum_probs=100.0
Q ss_pred CHHHHHHHhHHHH-HhhCCHHHHHHHHHHHHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhcccccc
Q 024296 53 SLHEVFKLFDLIH-VLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFA 131 (269)
Q Consensus 53 ~l~~f~~~f~~~~-~l~~~~~~~~~~~~~~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~ 131 (269)
++.+++..+.+.. .-..++++++..+...+.++.+.||..+.-.+. ..+ .+.+...+.
T Consensus 108 ~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~---------~~~----~~~~~~~~~-------- 166 (468)
T 3lnp_A 108 PLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMYF---------YPQ----QSGEAALAA-------- 166 (468)
T ss_dssp CHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECCS---------CHH----HHHHHHHHH--------
T ss_pred CHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc---------CHH----HHHHHHHHc--------
Confidence 3455554443221 224678888999999999999999998865311 112 233333221
Q ss_pred ccccccccccccccccccccCCCCCCceEEEEEEEe-C----CCCHHHH-HHHHHHHHhhCCC-----ceEEEecCCC-C
Q 024296 132 SRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSID-R----RETTEAA-METVKLALEMRDL-----GVVGIDLSGN-P 199 (269)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~~~-R----~~~~~~~-~~~~~~a~~~~~~-----~vvGidl~G~-E 199 (269)
++...+...+. + ..+.+.. .+..++...+... +.+.+.++.. +
T Consensus 167 -------------------------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~ 221 (468)
T 3lnp_A 167 -------------------------GIRAVCFAPVLDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAP 221 (468)
T ss_dssp -------------------------TCEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCT
T ss_pred -------------------------CCeEEEeccccCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCC
Confidence 33333333222 1 1123322 2222333333221 2444443322 1
Q ss_pred CCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCCC---------------cccccccCCHHHHHHHHhCC
Q 024296 200 TKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQ---------------RIGHACCFEEEEWRKLKSSK 263 (269)
Q Consensus 200 ~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a~---------------RIGHG~~~~~~l~~~l~~~~ 263 (269)
...+++.+..+++.|++.|+++++|+.|. .+.+..++. +|.+ +|.|++.++++.++++++++
T Consensus 222 ~~~~~~~l~~~~~~A~~~g~~v~~H~~e~--~~~~~~~~~~~g~~~i~~~~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g 299 (468)
T 3lnp_A 222 YTVSDEPLKEITMLSDQLDMPVQIHLHET--DFEVSESLETFNKRPTQRLADIGFLNERVSCVHMTQVDDGDIKILQKTG 299 (468)
T ss_dssp TTSCHHHHHHHHHHHHHHTCCEEEEESCS--HHHHHHHHHHHSSCHHHHHHHTTCCSTTEEEEECCSCCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCC--HHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHhcC
Confidence 23456788999999999999999999984 344544443 3433 45699999999999999999
Q ss_pred CceeeC
Q 024296 264 IPVRIS 269 (269)
Q Consensus 264 I~lEic 269 (269)
+.+.+|
T Consensus 300 ~~v~~~ 305 (468)
T 3lnp_A 300 ASIIHC 305 (468)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 999876
No 12
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=98.48 E-value=8e-06 Score=76.68 Aligned_cols=191 Identities=14% Similarity=0.083 Sum_probs=115.1
Q ss_pred CCc-chhccccCCCCCHHHHHHHHHHhccCCCccchhhHHHHhhcCCCHHHHHHHhHHH-HHhhCCHHHHHHHHHHHHHH
Q 024296 7 MPK-VELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLI-HVLTTDHATVTRITQEVVED 84 (269)
Q Consensus 7 lPK-~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~~~~~~~~~~~~~~l~~f~~~f~~~-~~l~~~~~~~~~~~~~~~~~ 84 (269)
||- +|.|+|+.++.. .|.. ...++.+++..+... ..-..++++++..+...+.+
T Consensus 72 ~PGlID~H~Hl~~~~~-------------~g~~-----------~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~ 127 (472)
T 4dzh_A 72 MPGLVNAHTHNPMTLL-------------RGVA-----------DDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAE 127 (472)
T ss_dssp EECEEEEEECGGGGGG-------------TTSS-----------CSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHH
T ss_pred EECccccccChhhHHh-------------cccc-----------CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHH
Confidence 676 899999988651 1211 112445555543321 12246788999999999999
Q ss_pred HHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceEEEEE
Q 024296 85 FASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLL 164 (269)
Q Consensus 85 ~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~ 164 (269)
+.+.||-.+.-.+ ... +.+.++..+ .|+...+-.
T Consensus 128 ~l~~GvTtv~d~~---------~~~----~~~~~a~~~---------------------------------~g~r~~~~~ 161 (472)
T 4dzh_A 128 MLRGGTTCVNENY---------FFA----DVQAAVYKQ---------------------------------HGFRALVGA 161 (472)
T ss_dssp HHHTTEEEEEEEC---------SCH----HHHHHHHHH---------------------------------TTCEEEEEE
T ss_pred HHhCCcEEEEEcc---------cCH----HHHHHHHHH---------------------------------hCCeEEEEe
Confidence 9999999886332 122 233333322 133332222
Q ss_pred EEeC-----CCCHHH-HHHHHHHHHhhCCCceEEEecCCCC-CCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHH
Q 024296 165 SIDR-----RETTEA-AMETVKLALEMRDLGVVGIDLSGNP-TKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSM 237 (269)
Q Consensus 165 ~~~R-----~~~~~~-~~~~~~~a~~~~~~~vvGidl~G~E-~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~a 237 (269)
.+.- ..+.+. ..+..++...+...+.+.+.++... ...+++.+..+++.|++.|+++.+|+.|. ...+.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~--~~~~~~~ 239 (472)
T 4dzh_A 162 VIIDFPTAWASSDDEYFARAGELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHET--AQEVADS 239 (472)
T ss_dssp EECSSCCSSCSSHHHHHHHHHHHHHHHTTCSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCC--HHHHHHH
T ss_pred cccCCCcccccCHHHHHHHHHHHHHHhCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCC--HHHHHHH
Confidence 2221 112232 2333333334444455555544322 22356789999999999999999999985 3333333
Q ss_pred Hh------------cCC----CcccccccCCHHHHHHHHhCCCceeeC
Q 024296 238 LD------------FLP----QRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 238 i~------------l~a----~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
++ +|. .+|.|++.++++.+++++++++.+.+|
T Consensus 240 ~~~~g~~~i~~~~~~g~~~~~~~~~H~~~l~~~~i~~l~~~g~~v~~~ 287 (472)
T 4dzh_A 240 VAQYGQRPLARLDRLGLVNDRLIAVHMTQLTEAEIHLCAERGVSVVHC 287 (472)
T ss_dssp HHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEEC
T ss_pred HHHhCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCEEEEC
Confidence 32 232 258899999999999999999998876
No 13
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=98.36 E-value=3.9e-05 Score=70.96 Aligned_cols=203 Identities=13% Similarity=0.090 Sum_probs=121.7
Q ss_pred CCc-chhccccCCCCCHHHHHHHHHHhccCCCccchhhHHHHhhcCCCHHHHHHHh----HHHHH-hhCCHHHHHHHHHH
Q 024296 7 MPK-VELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLF----DLIHV-LTTDHATVTRITQE 80 (269)
Q Consensus 7 lPK-~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~~~~~~~~~~~~~~l~~f~~~f----~~~~~-l~~~~~~~~~~~~~ 80 (269)
||- +|.|+|+..+.. .|... ....++.+++..+ ..+.. -..++++++..+..
T Consensus 56 ~PG~ID~H~H~~~~~~-------------~g~~~---------~~~~~l~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~ 113 (456)
T 3ls9_A 56 LPGLINSHQHLYEGAM-------------RAIPQ---------LERVTMASWLEGVLTRSAGWWRDGKFGPDVIREVARA 113 (456)
T ss_dssp EECEEEEEECGGGGGG-------------BTCGG---------GSSCCHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHH
T ss_pred ecCeeecccccchhhh-------------ccccc---------CCCCCHHHHHHHhccccccccccccCCHHHHHHHHHH
Confidence 676 899999876531 12110 0124556666554 21122 13578899999999
Q ss_pred HHHHHHhcCCeEEEEe-cCCCCcccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCce
Q 024296 81 VVEDFASENIVYLELR-TTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIY 159 (269)
Q Consensus 81 ~~~~~~~dnV~Y~Elr-~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 159 (269)
.+.++.+.||.+++-. +..... .. ...++.+.++.++. |+.
T Consensus 114 ~~~~~l~~GvTtv~d~~~~~~~~----~~-~~~~~~~~~a~~~~---------------------------------g~r 155 (456)
T 3ls9_A 114 VLLESLLGGITTVADQHLFFPGA----TA-DSYIDATIEAATDL---------------------------------GIR 155 (456)
T ss_dssp HHHHHHHTTEEEEEEEECCCCSS----SC-CTHHHHHHHHHHHH---------------------------------TCE
T ss_pred HHHHHHhCCeeEEEeccccccCc----cc-chhHHHHHHHHHHc---------------------------------CCE
Confidence 9999999999999887 322111 10 12345555555432 333
Q ss_pred EEEEEEEeCC-------------CCHH-HHHHHHHHHHhhCC---CceEEEecCCC-CCCCChhhHHHHHHHHHHcCCce
Q 024296 160 VRLLLSIDRR-------------ETTE-AAMETVKLALEMRD---LGVVGIDLSGN-PTKGEWTTFLPALKFAREQGLQI 221 (269)
Q Consensus 160 ~rli~~~~R~-------------~~~~-~~~~~~~~a~~~~~---~~vvGidl~G~-E~~~~~~~f~~~f~~ar~~gl~~ 221 (269)
..+..+.... .+.+ ...+..++...+.. .+.+.+.++.. ....+++.+..+++.|++.|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v 235 (456)
T 3ls9_A 156 FHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRL 235 (456)
T ss_dssp EEEEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTCEE
T ss_pred EEEEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCCE
Confidence 3332222111 1222 22333333334433 44555555543 22346678999999999999999
Q ss_pred eeecCCCCChhHH---------HHHHhcCC----CcccccccCCHHHHHHHHhCCCceeeC
Q 024296 222 TLHCGEIPNKEEI---------QSMLDFLP----QRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 222 t~HAGE~~~~e~i---------~~ai~l~a----~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
++|++|....+.+ ..+.++|. .+|.|++.++++.+++++++++.+.+|
T Consensus 236 ~~H~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~ 296 (456)
T 3ls9_A 236 HTHFYEPLDAGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHL 296 (456)
T ss_dssp EEEECCTTHHHHHHHHHSSCHHHHHHHTTCSSTTEEEEECCSCCGGGHHHHHHHTCEEEEC
T ss_pred EEEeCCCchHHHHHHHhCCCHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEEC
Confidence 9999997633211 11112332 479999999999999999999999887
No 14
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=98.30 E-value=1.6e-05 Score=74.32 Aligned_cols=181 Identities=12% Similarity=0.042 Sum_probs=111.0
Q ss_pred CCHHHHHHHhHHHHHhhCCHHHHHHHHHHHHHHHHhcCCeEEEEecCCCCcccCCC---CHHHHHHHHHHHHHhhhhccc
Q 024296 52 RSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGM---SKRSYMDAVVEGLRAVSAVDV 128 (269)
Q Consensus 52 ~~l~~f~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~dnV~Y~Elr~~p~~~~~~g~---~~~~~~~~v~~~~~~~~~~~~ 128 (269)
.+|.++++.+......+ ++++++..++..+.++.+.||..++-.+.+.. ...|. ...+.++.+.++.++.
T Consensus 76 ~~l~~wl~~~~~~~~~~-~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~-~~~g~~~~~~~~~~~~~~~a~~~~----- 148 (453)
T 3mdu_A 76 DSFWTWRELMYRMVARL-SPEQIEVIACQLYIEMLKAGYTAVAEFHYVHH-DLDGRSYADPAELSLRISRAASAA----- 148 (453)
T ss_dssp CCHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHTEEEEEEEECCCS-CTTSCCCSSTTHHHHHHHHHHHHH-----
T ss_pred CcHHHHHHHHhhhhhhC-CHHHHHHHHHHHHHHHHHcCCcEEEEeeEecc-ccccccccchhhHHHHHHHHHHHh-----
Confidence 45666666544334433 79999999999999999999999987654321 11111 1123345555555432
Q ss_pred cccccccccccccccccccccccCCCCCCceEEEEEEEeC----------------CCCHHHHHHHHHHHHhh--CCCce
Q 024296 129 DFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDR----------------RETTEAAMETVKLALEM--RDLGV 190 (269)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~~~R----------------~~~~~~~~~~~~~a~~~--~~~~v 190 (269)
|+...+...+.+ ..+++...+.++...+. ..+..
T Consensus 149 ----------------------------Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (453)
T 3mdu_A 149 ----------------------------GIGLTLLPVLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGHS 200 (453)
T ss_dssp ----------------------------TCEEEEEECBCCBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHHTCE
T ss_pred ----------------------------CCeEEEecchhccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcCCCe
Confidence 333222211111 12344444444433332 11226
Q ss_pred EEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCC----------hhHHHHHHhcC----CCcccccccCCHHHH
Q 024296 191 VGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPN----------KEEIQSMLDFL----PQRIGHACCFEEEEW 256 (269)
Q Consensus 191 vGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~----------~e~i~~ai~l~----a~RIGHG~~~~~~l~ 256 (269)
+|+...+.. ..+++.+..+++.|+ .|+++++|++|... ...+..+.++| ..+|.||+.++++.+
T Consensus 201 ~~~~p~~~~-~~~~e~l~~~~~~A~-~g~~v~~H~~e~~~e~~~~~~~~g~~~v~~l~~~g~~~~~~~~~H~~~~~~~~i 278 (453)
T 3mdu_A 201 LGLCFHSLR-AVTPQQIATVLAAGH-DDLPVHIHIAEQQKEVDDCQAWSGRRPLQWLYENVAVDQRWCLVHATHADPAEV 278 (453)
T ss_dssp ECEEEEETT-TSCHHHHHHHHTSSC-TTSCEEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCCHHHH
T ss_pred EEEecCCCC-cCCHHHHHHHHHHHh-cCCCEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEcCCCCHHHH
Confidence 676555443 346678889999999 99999999999541 11122233333 346899999999999
Q ss_pred HHHHhCCCceeeC
Q 024296 257 RKLKSSKIPVRIS 269 (269)
Q Consensus 257 ~~l~~~~I~lEic 269 (269)
++++++++.+.+|
T Consensus 279 ~~la~~g~~v~~~ 291 (453)
T 3mdu_A 279 AAMARSGAVAGLC 291 (453)
T ss_dssp HHHHHHTCEEEEC
T ss_pred HHHHHcCCEEEEC
Confidence 9999999999887
No 15
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=97.95 E-value=0.00017 Score=66.43 Aligned_cols=201 Identities=16% Similarity=0.160 Sum_probs=110.9
Q ss_pred CCc-chhccccCCCCCHHHHHHHHHHhccCCCccchhhHHHHhhcCCCHHHHHHHhHHHHHhhCCHHHHHHHHHHHHHHH
Q 024296 7 MPK-VELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDF 85 (269)
Q Consensus 7 lPK-~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~~~~~~~~~~~~~~l~~f~~~f~~~~~l~~~~~~~~~~~~~~~~~~ 85 (269)
||- +|.|+|+..+... +...+. ...++.+++..+... .-..++++++..+...++++
T Consensus 58 ~PGlID~H~Hl~~~~~~-------------~~~~~~--------~~~~~~~~l~~~~~~-~~~~~~e~~~~~~~~~~~~~ 115 (430)
T 1ra0_A 58 IPPFVEPHIHLDTTQTA-------------GQPNWN--------QSGTLFEGIERWAER-KALLTHDDVKQRAWQTLKWQ 115 (430)
T ss_dssp ESCEEEEEECTTTTTCT-------------TSSSCC--------SSCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhhhc-------------CCCcCC--------CCCCHHHHHHHhHHh-hhhcCHHHHHHHHHHHHHHH
Confidence 687 8999999876421 100000 012344444433211 11236788999999999999
Q ss_pred HhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceEEEEEE
Q 024296 86 ASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLS 165 (269)
Q Consensus 86 ~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~ 165 (269)
.+.||-.+.-..+... . . ...++.+.+..+... ..+.+.+ .+
T Consensus 116 l~~GvTtv~d~~~~~~---~-~--~~~~~~~~~~~~~~~-------------------------------~~~~~~~-~~ 157 (430)
T 1ra0_A 116 IANGIQHVRTHVDVSD---A-T--LTALKAMLEVKQEVA-------------------------------PWIDLQI-VA 157 (430)
T ss_dssp HHTTEEEEEEEEECCS---T-T--CHHHHHHHHHHHHHT-------------------------------TTCEEEE-EE
T ss_pred HhcCccEEeeccccCC---h-H--HHHHHHHHHHHHhhh-------------------------------hhEEEEE-Ee
Confidence 9999999876542100 0 0 112344433322211 0122221 12
Q ss_pred EeC--CCCHHHHHHHHHHHHhhCCCceEEEecCCCCCC--CChhhHHHHHHHHHHcCCceeeecCCCCCh--h---HHHH
Q 024296 166 IDR--RETTEAAMETVKLALEMRDLGVVGIDLSGNPTK--GEWTTFLPALKFAREQGLQITLHCGEIPNK--E---EIQS 236 (269)
Q Consensus 166 ~~R--~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~--~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~--e---~i~~ 236 (269)
+.. ....+...+.++.+.+... +++|+-.. .+.. .+++.+..+++.|++.|+++++|+.|.... . .+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~-~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~ 235 (430)
T 1ra0_A 158 FPQEGILSYPNGEALLEEALRLGA-DVVGAIPH-FEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAA 235 (430)
T ss_dssp ECTTCSSSSTTHHHHHHHHHHTTC-SEECCCGG-GSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTCCHHHHHHH
T ss_pred cCCcccccCchHHHHHHHHHHhCC-CeEeeeec-ccccccccHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHH
Confidence 211 0111123344454444432 35544211 1111 234568888999999999999999886532 1 1222
Q ss_pred H-HhcCC---CcccccccCCHH-------HHHHHHhCCCceeeC
Q 024296 237 M-LDFLP---QRIGHACCFEEE-------EWRKLKSSKIPVRIS 269 (269)
Q Consensus 237 a-i~l~a---~RIGHG~~~~~~-------l~~~l~~~~I~lEic 269 (269)
. .++|. .+|.|++.++++ .+++++++++.+++|
T Consensus 236 ~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~~~ 279 (430)
T 1ra0_A 236 LAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVAN 279 (430)
T ss_dssp HHHHHTCGGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHhCCCCCEEEEeccccccCChHhHHHHHHHHHHcCCEEEEC
Confidence 2 33554 589999988653 899999999999887
No 16
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=97.80 E-value=0.0046 Score=58.06 Aligned_cols=173 Identities=15% Similarity=0.080 Sum_probs=98.7
Q ss_pred CCHHHHHHHhH-HHHHhhCCHHHHHHHHHHHHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhccccc
Q 024296 52 RSLHEVFKLFD-LIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDF 130 (269)
Q Consensus 52 ~~l~~f~~~f~-~~~~l~~~~~~~~~~~~~~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~ 130 (269)
.+|.++++.+. .....+.+++..+.+....+.++.+.||-.+-. +.+. ..+ ....+.++..+.
T Consensus 119 ~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~-~~~~-------~~~-~~~~~~~a~~~~------- 182 (476)
T 4aql_A 119 LPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACY-FATI-------HTD-SSLLLADITDKF------- 182 (476)
T ss_dssp SCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEE-ECCS-------CHH-HHHHHHHHHHHH-------
T ss_pred CCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEE-eccc-------Cch-HHHHHHHHHHHh-------
Confidence 45677777764 344556666666677777778999999998853 2211 111 122334443332
Q ss_pred cccccccccccccccccccccCCCCCCceEEEE-EEEeCCC-------CHHH-HHHHHHHHHhhC--CCceEEEecCCCC
Q 024296 131 ASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLL-LSIDRRE-------TTEA-AMETVKLALEMR--DLGVVGIDLSGNP 199 (269)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli-~~~~R~~-------~~~~-~~~~~~~a~~~~--~~~vvGidl~G~E 199 (269)
|+..-+- .++++.. ..+. ..+..++..++. ....+.+.++ +.
T Consensus 183 --------------------------G~r~~~~~~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~-p~ 235 (476)
T 4aql_A 183 --------------------------GQRAFVGKVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVT-PR 235 (476)
T ss_dssp --------------------------TCEEEEECEECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSEEECBE-EC
T ss_pred --------------------------CCEEEEeeccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCceEEEEe-CC
Confidence 2222111 1122221 1222 222222222221 2234444443 22
Q ss_pred C--CCChhhHHHHHHHHHHcCCceeeecCCCCChhHHH-------------HHHh-cCC----CcccccccCCHHHHHHH
Q 024296 200 T--KGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQ-------------SMLD-FLP----QRIGHACCFEEEEWRKL 259 (269)
Q Consensus 200 ~--~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~-------------~ai~-l~a----~RIGHG~~~~~~l~~~l 259 (269)
. ..+++.+..+++.|++.|+++.+|++|.. ..+. +.+. +|. ..+.||+.++++.++++
T Consensus 236 ~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~--~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~~~~~l 313 (476)
T 4aql_A 236 FSLSCSETLMGELGNIAKTRDLHIQSHISENR--DEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVF 313 (476)
T ss_dssp CTTTSCHHHHHHHHHHHHHTTCCEEEEESCSH--HHHHHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCCHHHHHHH
T ss_pred cCCcCCHHHHHHHHHHHHHcCCceEEEecCCH--HHHHHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHH
Confidence 2 22557788899999999999999999953 2222 2222 332 24899999999999999
Q ss_pred HhCCCceeeC
Q 024296 260 KSSKIPVRIS 269 (269)
Q Consensus 260 ~~~~I~lEic 269 (269)
+++++.+..|
T Consensus 314 ~~~g~~v~~~ 323 (476)
T 4aql_A 314 HERGASIAHC 323 (476)
T ss_dssp HHHTCEEEEC
T ss_pred HHcCCEEEEC
Confidence 9999998877
No 17
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=97.77 E-value=0.00016 Score=65.52 Aligned_cols=96 Identities=14% Similarity=0.177 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCC---------CCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGN---------PTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDF 240 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~---------E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l 240 (269)
.+++++.+.++...+...+ .+.+-..|. ....+++.+..+++.|++.|+++++|+.+ .+.+..+++.
T Consensus 164 ~~~~~~~~~~~~~~~~g~~-~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~---~~~i~~~~~~ 239 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQ-VIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHG---ASGIREAVRA 239 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCS-EEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECS---HHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCC-EEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHh
Confidence 3466666666666554333 333333221 22345678999999999999999999955 5668889999
Q ss_pred CCCcccccccCCHHHHHHHHhCCCceeeC
Q 024296 241 LPQRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 241 ~a~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
|+++|.|++.++++.+++++++++.+..|
T Consensus 240 g~~~i~H~~~~~~~~~~~~~~~g~~~~~~ 268 (403)
T 3gnh_A 240 GVDTIEHASLVDDEGIKLAVQKGAYFSMD 268 (403)
T ss_dssp TCSEEEECTTCCHHHHHHHHHHTCEEECC
T ss_pred CCCEEecCCcCCHHHHHHHHHCCCEEEee
Confidence 99999999999999999999999987643
No 18
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=97.53 E-value=0.00067 Score=62.30 Aligned_cols=93 Identities=15% Similarity=0.109 Sum_probs=69.7
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCC--C---C---CCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCC
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSG--N---P---TKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLP 242 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G--~---E---~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a 242 (269)
+++++.+.++...+...+.+.-+--.| . + ...+++.+..+++.|++.|+++++|+. +.+.+..+++.|+
T Consensus 173 ~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~---~~~~i~~al~~G~ 249 (426)
T 2r8c_A 173 GVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAY---TPAAIARAVRCGV 249 (426)
T ss_dssp SHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEEC---SHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeC---ChHHHHHHHHcCC
Confidence 466666666655554444333332111 1 1 123567799999999999999999997 4677899999999
Q ss_pred CcccccccCCHHHHHHHHhCCCce
Q 024296 243 QRIGHACCFEEEEWRKLKSSKIPV 266 (269)
Q Consensus 243 ~RIGHG~~~~~~l~~~l~~~~I~l 266 (269)
++|.|+..++++.+++++++++.+
T Consensus 250 ~~i~H~~~~~~~~~~~~~~~gv~~ 273 (426)
T 2r8c_A 250 RTIEHGNLIDDETARLVAEHGAYV 273 (426)
T ss_dssp SEEEECTTCCHHHHHHHHHTTCEE
T ss_pred CEEecCCcCCHHHHHHHHHcCCeE
Confidence 999999999999999999999977
No 19
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=97.48 E-value=0.0085 Score=55.06 Aligned_cols=67 Identities=13% Similarity=0.011 Sum_probs=51.7
Q ss_pred ChhhHHHHHHHHHHcCCceeeecCCCCCh------------hHHHHHHhcCCCc-----ccccccCCHHHHHHHHhCCCc
Q 024296 203 EWTTFLPALKFAREQGLQITLHCGEIPNK------------EEIQSMLDFLPQR-----IGHACCFEEEEWRKLKSSKIP 265 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~gl~~t~HAGE~~~~------------e~i~~ai~l~a~R-----IGHG~~~~~~l~~~l~~~~I~ 265 (269)
+.+.+..+++.|++.|+++++|+.|.... ..+..+.++|..+ |.|++.++++.+++++++++.
T Consensus 208 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~H~~~~~~~~~~~l~~~g~~ 287 (439)
T 2i9u_A 208 SNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVT 287 (439)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHCTTCSSHHHHHHHTTCSSSSCEEEEECCSCCHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHhcCCcEEEeecCChHHHHHHHHHhCCCCCHHHHHHHcCCCCCCCeEEEEEecCCHHHHHHHHHcCCE
Confidence 45778889999999999999999985310 1122223355543 999999999999999999999
Q ss_pred eeeC
Q 024296 266 VRIS 269 (269)
Q Consensus 266 lEic 269 (269)
+++|
T Consensus 288 ~~~~ 291 (439)
T 2i9u_A 288 IVHC 291 (439)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9887
No 20
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=97.44 E-value=0.00053 Score=62.55 Aligned_cols=92 Identities=13% Similarity=0.054 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCC---------CCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcC
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGN---------PTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFL 241 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~---------E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~ 241 (269)
+++.+.+.++...+...+.+..+ ..|. ....+++.+..+++.|++.|+++++|+. +.+.+..+++.|
T Consensus 170 ~~~~~~~~v~~~~~~g~~~ik~~-~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~---~~~~i~~~l~~g 245 (423)
T 3feq_A 170 GVEGVRLAVREEIQKGATQIKIM-ASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAY---TGRAIARAVRCG 245 (423)
T ss_dssp SHHHHHHHHHHHHHTTCSSEEEE-CBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEE---EHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe-ccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeC---ChHHHHHHHHcC
Confidence 45666666665555433333332 2211 1123557799999999999999999997 357788999999
Q ss_pred CCcccccccCCHHHHHHHHhCCCce
Q 024296 242 PQRIGHACCFEEEEWRKLKSSKIPV 266 (269)
Q Consensus 242 a~RIGHG~~~~~~l~~~l~~~~I~l 266 (269)
+++|.|+..++++.+++++++++.+
T Consensus 246 ~~~i~H~~~~~~~~~~~l~~~gv~~ 270 (423)
T 3feq_A 246 VRTIEHGNLVDEAAAKLMHEHGAFV 270 (423)
T ss_dssp CCEEEEEEECCHHHHHHHHHHTCEE
T ss_pred CCEEeccCcCCHHHHHHHHHCCCcc
Confidence 9999999999999999999999977
No 21
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=97.39 E-value=0.0095 Score=55.52 Aligned_cols=69 Identities=14% Similarity=0.065 Sum_probs=50.1
Q ss_pred CCChhhHHHHHHHHHHcCCceeeecCCCCCh----------hHHHHHHhcC---CC-cccccccCCHHHHHHHHhCCCce
Q 024296 201 KGEWTTFLPALKFAREQGLQITLHCGEIPNK----------EEIQSMLDFL---PQ-RIGHACCFEEEEWRKLKSSKIPV 266 (269)
Q Consensus 201 ~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~----------e~i~~ai~l~---a~-RIGHG~~~~~~l~~~l~~~~I~l 266 (269)
..+++.+..+++.|++.|+++.+|+.|.... ..+.-+...| ++ +|.|++.++++.+++++++++.+
T Consensus 225 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~l~~~gv~v 304 (492)
T 2paj_A 225 SISPREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGV 304 (492)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECC-------------CCCHHHHHHHTTCCSTTEEEESCCSCCHHHHHHHHHHTCEE
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCEE
Confidence 3456778899999999999999999985321 1222223333 23 47999999999999999999999
Q ss_pred eeC
Q 024296 267 RIS 269 (269)
Q Consensus 267 Eic 269 (269)
++|
T Consensus 305 ~~~ 307 (492)
T 2paj_A 305 AHC 307 (492)
T ss_dssp EEC
T ss_pred EEC
Confidence 887
No 22
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=97.24 E-value=0.0023 Score=58.07 Aligned_cols=94 Identities=10% Similarity=0.049 Sum_probs=67.4
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEe---cCCC-----CCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCC
Q 024296 171 TTEAAMETVKLALEMRDLGVVGID---LSGN-----PTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLP 242 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGid---l~G~-----E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a 242 (269)
+++...+.++.+.+...+.+.-+- +.+. ....+++.+..+++.|++.|+++++|+.+ ...+..+++.|.
T Consensus 164 ~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~---~~~i~~~~~~g~ 240 (408)
T 3be7_A 164 SPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHG---LIGIKAAIKAGV 240 (408)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECS---HHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCC
Confidence 456666666655544333332221 1111 11234577899999999999999999965 456778888899
Q ss_pred CcccccccCCHHHHHHHHhCCCcee
Q 024296 243 QRIGHACCFEEEEWRKLKSSKIPVR 267 (269)
Q Consensus 243 ~RIGHG~~~~~~l~~~l~~~~I~lE 267 (269)
++|.|++..+++.+++++++++.+-
T Consensus 241 ~~i~H~~~~~~~~i~~~~~~g~~v~ 265 (408)
T 3be7_A 241 DSVEHASFIDDETIDMAIKNNTVLS 265 (408)
T ss_dssp SEEEECTTCCHHHHHHHHHTTCEEE
T ss_pred CEEEECCCCCHHHHHHHHHCCCEEe
Confidence 9999999999999999999998763
No 23
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=97.24 E-value=0.0016 Score=59.47 Aligned_cols=62 Identities=11% Similarity=0.103 Sum_probs=54.7
Q ss_pred CChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccccccCCHHHHHHHHhCCCce
Q 024296 202 GEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPV 266 (269)
Q Consensus 202 ~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~~~~l~~~l~~~~I~l 266 (269)
.+++.+..+++.|++.|+++++|+. +...+..++++|.++|.|++.++++.+++++++++.+
T Consensus 213 ~~~~~l~~~~~~A~~~g~~v~~H~~---~~~~i~~~~~~g~~~i~H~~~~~~~~i~~l~~~gv~v 274 (418)
T 2qs8_A 213 FTQEEVDAVVSAAKDYGMWVAVHAH---GAEGMKRAIKAGVDSIEHGTFMDLEAMDLMIENGTYY 274 (418)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEEC---SHHHHHHHHHHTCSEEEECTTCCHHHHHHHHHHTCEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEC---CHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHCCCEE
Confidence 3567899999999999999999996 3566888888999999999999999999999999864
No 24
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=97.23 E-value=0.019 Score=53.02 Aligned_cols=165 Identities=10% Similarity=0.056 Sum_probs=96.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEecCCC--CcccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccc
Q 024296 69 TDHATVTRITQEVVEDFASENIVYLELRTTPK--RNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNM 146 (269)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~dnV~Y~Elr~~p~--~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (269)
-++++++..+...+.++.+.|+..+.-..... .....-.+..+.++.+.++.++.
T Consensus 101 ~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~----------------------- 157 (458)
T 4f0l_A 101 MTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAATTA----------------------- 157 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHH-----------------------
T ss_pred CCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHHHHc-----------------------
Confidence 47888999999999999999998877643321 11111112223455555555432
Q ss_pred cccccCCCCCCceEEEEEEEeC----------------CCCHHHHHHHHHHHHhh-C--CCceEEEecCCCCCCCChhhH
Q 024296 147 NDACNGTRGKKIYVRLLLSIDR----------------RETTEAAMETVKLALEM-R--DLGVVGIDLSGNPTKGEWTTF 207 (269)
Q Consensus 147 ~~~~~~~~~~~i~~rli~~~~R----------------~~~~~~~~~~~~~a~~~-~--~~~vvGidl~G~E~~~~~~~f 207 (269)
|+.+.+...+.. ..+++...+.++.+.+. . +...+|+...+.. ..+++.+
T Consensus 158 ----------g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 226 (458)
T 4f0l_A 158 ----------GMGLTLLPVFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEGFEGAVLGVAPHSLR-AVTPDEL 226 (458)
T ss_dssp ----------TCEEEEEEEECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTTCTTCEECBEECBTT-TSCHHHH
T ss_pred ----------CCeEEEecchhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhccCCceEEEEecCCcC-cCCHHHH
Confidence 333333222211 13455555555444432 2 2235555443332 2355667
Q ss_pred HHHHHHHHHcCCceeeecCCCCC----------hhHHHHHHhcC----CCcccccccCCHHHHHHHHhCCCceeeC
Q 024296 208 LPALKFAREQGLQITLHCGEIPN----------KEEIQSMLDFL----PQRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 208 ~~~f~~ar~~gl~~t~HAGE~~~----------~e~i~~ai~l~----a~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
..+++.|+ |+++.+|+.|... ...+..+.++| ...+.|++.++++.++++++.++.+.+|
T Consensus 227 ~~~~~~a~--g~~v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~ 300 (458)
T 4f0l_A 227 DSVTQLLP--DAPVHIHVAEQVKEVEDCIAWSGKRPVEWLLDHQDVTARWCLIHATHMSDEETKHMAKAGAIAGLC 300 (458)
T ss_dssp HHHTTSST--TSCEEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHhc--CCCEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHHHcCCeEEEC
Confidence 77777777 9999999999631 11122222233 2457799999999999999999988876
No 25
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=97.22 E-value=0.0056 Score=55.31 Aligned_cols=162 Identities=17% Similarity=0.168 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhcccccccccccccccccccccccc
Q 024296 70 DHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDA 149 (269)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (269)
++++++..+...+.++.+.||-++....+... ..|+. .++.+.+..++...
T Consensus 99 ~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~--~~~~~---~~~~~~~~~~~~~~------------------------ 149 (403)
T 2qt3_A 99 THEEIKRHVIEHAHMQVLHGTLYTRTHVDVDS--VAKTK---AVEAVLEAKEELKD------------------------ 149 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHTTEEEEEEEEECST--TTTTH---HHHHHHHHHHHHTT------------------------
T ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEEEcccC--ccccc---hHHHHHHHHHHhhc------------------------
Confidence 78888888888899999999998865443221 11221 13344444433210
Q ss_pred ccCCCCCCceEEEEEEEeC--CCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCC
Q 024296 150 CNGTRGKKIYVRLLLSIDR--RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGE 227 (269)
Q Consensus 150 ~~~~~~~~i~~rli~~~~R--~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE 227 (269)
.+..++. .+.. ....+...+.++.+.+...+.+.|++..+ ....+++.+..+++.|++.|+++++|+.|
T Consensus 150 -------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~p~~-~~~~~~~~l~~~~~~A~~~g~~v~~H~~~ 220 (403)
T 2qt3_A 150 -------LIDIQVV-AFAQSGFFVDLESESLIRKSLDMGCDLVGGVDPAT-RENNVEGSLDLCFKLAKEYDVDIDYHIHD 220 (403)
T ss_dssp -------TCEEEEE-EECTTCTTTSTTHHHHHHHHHHTTCSEEECBCTTT-TTSCHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred -------ceeEEEE-EcCCcccccCcchHHHHHHHHhcCCCeEEEecCCC-CCCChHHHHHHHHHHHHHcCCCeEEEeCC
Confidence 0122221 1111 11122344566655554333233343211 11223367888999999999999999998
Q ss_pred CCCh--hHHH---H-HHhcCC---CcccccccCCH-------HHHHHHHhCCCceeeC
Q 024296 228 IPNK--EEIQ---S-MLDFLP---QRIGHACCFEE-------EEWRKLKSSKIPVRIS 269 (269)
Q Consensus 228 ~~~~--e~i~---~-ai~l~a---~RIGHG~~~~~-------~l~~~l~~~~I~lEic 269 (269)
.... ..+. + +.+.|. .+|.|++.+++ +.+++++++++.+.+|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~ 278 (403)
T 2qt3_A 221 IGTVGVYSINRLAQKTIENGYKGRVTTSHAWCFADAPSEWLDEAIPLYKDSGMKFVTC 278 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCTTSEEEEECTHHHHSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred cccchhHHHHHHHHHHHHcCCCCCeEEEehhhhccCChhhHHHHHHHHHHcCCEEEEC
Confidence 6431 2222 2 334564 68999988754 7899999999988765
No 26
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=97.18 E-value=0.00059 Score=62.47 Aligned_cols=68 Identities=13% Similarity=0.096 Sum_probs=59.3
Q ss_pred CChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccccccCCHHHHHHHHhCCCceeeC
Q 024296 202 GEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 202 ~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
.+++.+..+++.|++.|+++.+|+.|....+.+..+...|..+|.|++.++++.++++++.++.+.+|
T Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~g~~~~~H~~~~~~~~~~~~~~~g~~~~~~ 287 (416)
T 2q09_A 220 FSLAQTEQVYLAADQYGLAVKGHMDQLSNLGGSTLAANFGALSVDHLEYLDPEGIQALAHRGVVATLL 287 (416)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEESSSCCCSHHHHHHHTTCSEEEECTTCCHHHHHHHHHHTCEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCcEEEEECCCCchHHHHHHHHcCCCEEeecccCCHHHHHHHHHcCCeEEEc
Confidence 45678999999999999999999998765456767777899999999999999999999999988876
No 27
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=96.88 E-value=0.074 Score=49.52 Aligned_cols=67 Identities=16% Similarity=0.257 Sum_probs=49.9
Q ss_pred ChhhHHHHHHHHHHc-CCceeeecCCCCC-hhH----------HHHHHh-c---CC-CcccccccCCHHHHHHHHhCCCc
Q 024296 203 EWTTFLPALKFAREQ-GLQITLHCGEIPN-KEE----------IQSMLD-F---LP-QRIGHACCFEEEEWRKLKSSKIP 265 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~-gl~~t~HAGE~~~-~e~----------i~~ai~-l---~a-~RIGHG~~~~~~l~~~l~~~~I~ 265 (269)
+++.+..+++.|++. |+++.+|+.|... .+. +.++++ + ++ .+|.|++.++++.+++++++++.
T Consensus 212 ~~e~l~~~~~~a~~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~~~~~g~~ 291 (475)
T 2ood_A 212 SPELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAA 291 (475)
T ss_dssp CHHHHHHHHHHHHHCTTSEEEEECSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHHTCE
T ss_pred CHHHHHHHHHHHHhCCCCcEEEeeCCChHHHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCE
Confidence 456788899999999 9999999998532 111 112222 2 32 25899999999999999999999
Q ss_pred eeeC
Q 024296 266 VRIS 269 (269)
Q Consensus 266 lEic 269 (269)
+++|
T Consensus 292 ~~~~ 295 (475)
T 2ood_A 292 VVFC 295 (475)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8877
No 28
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=96.82 E-value=0.0043 Score=55.81 Aligned_cols=64 Identities=13% Similarity=0.257 Sum_probs=55.0
Q ss_pred ChhhHHHHHHHHHHcCCceeeecCCC----CChhHHHHHHhcCCCccccccc----CCHHHHHHHHhCCCce
Q 024296 203 EWTTFLPALKFAREQGLQITLHCGEI----PNKEEIQSMLDFLPQRIGHACC----FEEEEWRKLKSSKIPV 266 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~gl~~t~HAGE~----~~~e~i~~ai~l~a~RIGHG~~----~~~~l~~~l~~~~I~l 266 (269)
+++.+..+++.|++.|+++.+|++|. .+.+.+..+++.|++.|.|+.. .+++.++.++++++.+
T Consensus 172 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~i~~~~~~G~~~i~H~~~~~~~~~~~~~~~~~~~g~~v 243 (386)
T 2vun_A 172 NPEDAAPMVEWAHKHGFKVQMHTGGTSIPGSSTVTADDVIKTKPDVVSHINGGPTAISVQEVDRIMDETDFA 243 (386)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEECSCCSCSTTCSCCHHHHHHHCCSEEETTTCSSSCCCHHHHHHHHHHCCCE
T ss_pred CHHHHHHHHHHHHHCCCeEEEecCCccccccCHHHHHHHHHcCCCEEEEccCCCCCCCHHHHHHHHHcCCeE
Confidence 56778999999999999999999975 2456688888889999999987 7889999999999876
No 29
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=96.47 E-value=0.15 Score=46.89 Aligned_cols=78 Identities=18% Similarity=0.183 Sum_probs=54.6
Q ss_pred EEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCCh-hH------------------------HHHHHhc-CCCc
Q 024296 191 VGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNK-EE------------------------IQSMLDF-LPQR 244 (269)
Q Consensus 191 vGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~-e~------------------------i~~ai~l-~a~R 244 (269)
+++...+.. ..+++.+..+++.|++.|+++.+|++|+... +. ..+.+.+ ...|
T Consensus 174 ~~~~~~~~~-~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 252 (427)
T 3v7p_A 174 AAVAIHSPY-SVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFAKFFKEFLNQTRPVNDTKSFLELFKELH 252 (427)
T ss_dssp EEEEECCTT-TBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHHHHHHHHHTCCCSCSSCHHHHHHTTTTSE
T ss_pred EEEecCCCC-cCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcchhhhhhhccCCCcccCHHHHHhhhcCCC
Confidence 344443332 3356778899999999999999999996421 11 1121222 2223
Q ss_pred --ccccccCCHHHHHHHHhCCCceeeC
Q 024296 245 --IGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 245 --IGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
+.|++.++++.+++++++++.+.+|
T Consensus 253 ~~~~H~~~~~~~~~~~l~~~g~~~~~~ 279 (427)
T 3v7p_A 253 TLFVHMVWANEEEIQTIASYNAHIIHC 279 (427)
T ss_dssp EEEEECTTCCHHHHHHHHHSEEEEEEC
T ss_pred EEEEECCCCCHHHHHHHHHcCCEEEEC
Confidence 8899999999999999999988776
No 30
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=96.38 E-value=0.0013 Score=60.02 Aligned_cols=65 Identities=14% Similarity=0.087 Sum_probs=50.2
Q ss_pred hhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHH-hcCCC-cccccccCCHHHHHHHHhCCCceeeC
Q 024296 204 WTTFLPALKFAREQGLQITLHCGEIPNKEEIQSML-DFLPQ-RIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 204 ~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai-~l~a~-RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
+....+.+..+.+.|+++++|+.+..+...+.+.+ ++|++ +|+||+...+ .++.+++.++.+.+|
T Consensus 206 ~~~~~e~l~~~~~~~~~v~iHa~~~~~i~~~~~~~~~~g~~~~i~H~~~~~~-~~~~l~~~gv~v~~~ 272 (396)
T 3ooq_A 206 TDLKMEVGEMVLRKKIPARMHAHRADDILTAIRIAEEFGFNLVIEHGTEAYK-ISKVLAEKKIPVVVG 272 (396)
T ss_dssp CCHHHHHHHHHHTTSSCEEEEECSHHHHHHHHHHHHHHTCCEEEEECTTGGG-GHHHHHHHTCCEEEC
T ss_pred cChhHHHHHHHHcCCCcEEEEECchhHHHHHHHHHHHcCCCEEEecCchHHH-HHHHHHHCCCCEEEC
Confidence 35566778888889999999998865434444433 37887 9999998765 489999999999887
No 31
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=96.36 E-value=0.025 Score=52.18 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=53.4
Q ss_pred ChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccccccCCHHHHHHHH------hCCCce
Q 024296 203 EWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLK------SSKIPV 266 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~~~~l~~~l~------~~~I~l 266 (269)
+++.+..+++.|++.|+++.+|+.+ .+.+..+++.|.++|.|+..+.++.+++++ +.++.+
T Consensus 225 ~~~~l~~~~~~a~~~g~~v~~H~~~---~~~i~~~~~~G~~~i~H~~~~~~~~~~~~~~~~~~~~~g~~v 291 (458)
T 2p9b_A 225 SVEQMRAICDEAHQYGVIVGAHAQS---PEGVRRSLLAGVDTIEHGSVLDDELIGMFRHNPNALRGYSAL 291 (458)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECS---HHHHHHHHHHTCSEEEECCCCCHHHHHHHHCCTTSTTSCCEE
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHHcCCCEEEECCCCCHHHHHHHhcccccccCCeEE
Confidence 4567889999999999999999953 567888888999999999999999999999 899865
No 32
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=96.20 E-value=0.0082 Score=54.78 Aligned_cols=68 Identities=16% Similarity=0.085 Sum_probs=56.6
Q ss_pred CChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccccccCCHHHHHHHHhCCCceeeC
Q 024296 202 GEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 202 ~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
.+++.+..+++.|++.|+++.+|+.|......+..+..+|..+|.|++.++++.++++++.++.+-+|
T Consensus 227 ~~~e~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~g~~~~~H~~~~~~~~i~~~~~~g~~~~~~ 294 (421)
T 2bb0_A 227 FTVSQSRRYLQKAAEAGFGLKIHADEIDPLGGAELAGKLKAVSADHLVGTSDEGIKKLAEAGTIAVLL 294 (421)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECSSSCCSHHHHHHHTTCSEEEECTTCCHHHHHHHHHHTCEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeccccccCHHHHHHHcCCcEEhhhhcCCHHHHHHHHHcCCeEEEC
Confidence 35678889999999999999999988764445555666888999999999999999999999877654
No 33
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=96.16 E-value=0.021 Score=52.23 Aligned_cols=67 Identities=13% Similarity=0.228 Sum_probs=50.9
Q ss_pred ChhhHHHHHHHHHHcCCceeeecCCCCCh-h-----------------------------------HHHHHHhcCC----
Q 024296 203 EWTTFLPALKFAREQGLQITLHCGEIPNK-E-----------------------------------EIQSMLDFLP---- 242 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~gl~~t~HAGE~~~~-e-----------------------------------~i~~ai~l~a---- 242 (269)
+.+.+..+++.|++.|+++++|+.|.... + .+..+.+.|.
T Consensus 219 ~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 298 (420)
T 2imr_A 219 SHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAAR 298 (420)
T ss_dssp CHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHHSCSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGGC
T ss_pred CHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHhhccccccccccchhhhhhhhccccccCCCCHHHHHHHcCCCCCC
Confidence 45778889999999999999999885310 0 1111222343
Q ss_pred CcccccccCCHHHHHHHHhCCCceeeC
Q 024296 243 QRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 243 ~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
..|.|++.++++.+++++++++.+++|
T Consensus 299 ~~i~H~~~l~~~~i~~l~~~g~~~~~~ 325 (420)
T 2imr_A 299 PTLVHMVNVTPDDIARVARAGCAVVTC 325 (420)
T ss_dssp CEEEECCSCCHHHHHHHHHHTCCEEEC
T ss_pred eEEEecCcCCHHHHHHHHHcCCeEEEC
Confidence 689999999999999999999999887
No 34
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=95.93 E-value=0.013 Score=53.30 Aligned_cols=68 Identities=13% Similarity=0.140 Sum_probs=57.0
Q ss_pred CChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccccccCCHHHHHHHHhCCCceeeC
Q 024296 202 GEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 202 ~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
.+++.+..+++.|++.|+++.+|+.+....+.+..+...|..+|.|++.++++.++++++.++.+-+|
T Consensus 232 ~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~g~~~~~H~~~~~~~~~~~~~~~g~~~~~~ 299 (419)
T 2puz_A 232 FSVKEIDRVFAAAQQRGLPVKLHAEQLSNLGGAELAASYNALSADHLEYLDETGAKALAKAGTVAVLL 299 (419)
T ss_dssp BCHHHHHHHHHHHHHTTCCBEEEESSSSCCSHHHHHHHTTCSEEEECTTCCHHHHHHHHHHTCEEEEC
T ss_pred cCHHHHHHHHHHHHHCCCcEEEEecccccCCHHHHHHhcCCceehHhccCCHHHHHHHHHcCCcEEEC
Confidence 34577888999999999999999998765556666677899999999999999999999998876554
No 35
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=95.81 E-value=0.0074 Score=57.87 Aligned_cols=64 Identities=19% Similarity=0.369 Sum_probs=53.5
Q ss_pred ChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCC-----CcccccccCCHHHHHHHHhCCCceeeC
Q 024296 203 EWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLP-----QRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a-----~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
+++++..+++.|++.|+++.+||- +...+..+++.+. .||.|+..++++.+++|++.++.+.+|
T Consensus 327 ~~e~l~~~v~~A~~~G~~v~~Ha~---gd~ai~~~l~a~~~~~~r~~ieH~~~~~~e~i~~la~~gv~~~~~ 395 (534)
T 3icj_A 327 NKDEIVEVIERAKPLGLDVAVHAI---GDKAVDVALDAFEEAEFSGRIEHASLVRDDQLERIKELKVRISAQ 395 (534)
T ss_dssp CHHHHHHHHHHHTTTTCEEEEEEC---SHHHHHHHHHHHHHHTCCCEEEECCBCCHHHHHHHHHHTCEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc---ChHHHHHHHHHHHhccCCCEEEECCCCCHHHHHHHHHcCCeEEEc
Confidence 457788999999999999999995 4556666665433 899999999999999999999988765
No 36
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=94.63 E-value=0.2 Score=42.39 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cC--CCcccccccCCHHHHHHHHhCCCceeeC
Q 024296 205 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FL--PQRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~--a~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
+.|.+.++.|++.|+|+.+|.+. ..+.+.+.+. .+ ...|-|++.-..+.++.+.++|+-+.++
T Consensus 114 ~~f~~~~~~a~~~~~Pv~iH~~~--a~~~~~~il~~~~~~~~~i~H~~~g~~~~~~~~~~~g~~i~~~ 179 (259)
T 1zzm_A 114 WLLDEQLKLAKRYDLPVILHSRR--THDKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGVG 179 (259)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEES--CHHHHHHHHHHHCCTTCEEETTCCSCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHhCCcEEEEecc--cHHHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHCCCEEEEC
Confidence 35888899999999999999987 3456767665 55 3678898776777777777888877653
No 37
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.31 E-value=1.2 Score=38.98 Aligned_cols=205 Identities=12% Similarity=0.033 Sum_probs=126.3
Q ss_pred CCCCCHHHHHHHHHHhccCCCccch-----hhHHHHhhcCCCHHHHHHHhHH-----HHHhhCCHHHHHHHHHHHHHHHH
Q 024296 17 NGSIRDSTLLELARVLGEKGVIVFS-----DVEHVIMKSDRSLHEVFKLFDL-----IHVLTTDHATVTRITQEVVEDFA 86 (269)
Q Consensus 17 ~Gs~~~~tl~~la~~~~~~g~~~~~-----~~~~~~~~~~~~l~~f~~~f~~-----~~~l~~~~~~~~~~~~~~~~~~~ 86 (269)
..+++.+..+++++...+.|++... ..+ +.+ ...+..++++.... +..++.+. +-++.+.
T Consensus 20 ~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~-~~p-~~~~~~e~~~~i~~~~~~~v~~l~~n~--------~~i~~a~ 89 (295)
T 1ydn_A 20 KRFVPTADKIALINRLSDCGYARIEATSFVSPK-WVP-QLADSREVMAGIRRADGVRYSVLVPNM--------KGYEAAA 89 (295)
T ss_dssp SSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTT-TCG-GGTTHHHHHHHSCCCSSSEEEEECSSH--------HHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCcCEEEEccCcCcc-ccc-cccCHHHHHHHHHhCCCCEEEEEeCCH--------HHHHHHH
Confidence 3468899999998887666754311 111 000 01133344443321 11222332 3345566
Q ss_pred hcCCeEEEEecCCCC-c--ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceEEEE
Q 024296 87 SENIVYLELRTTPKR-N--ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLL 163 (269)
Q Consensus 87 ~dnV~Y~Elr~~p~~-~--~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli 163 (269)
+-|+..+-+-.+... + ...+.+.++.++.+.+.++.+++ .|+.+..-
T Consensus 90 ~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~------------------------------~G~~V~~~ 139 (295)
T 1ydn_A 90 AAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAIN------------------------------DGLAIRGY 139 (295)
T ss_dssp HTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHH------------------------------TTCEEEEE
T ss_pred HCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHH------------------------------cCCeEEEE
Confidence 678887666432211 1 12357889999999888887654 35555532
Q ss_pred EEE-------eCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc-C-CceeeecCCCCC--hh
Q 024296 164 LSI-------DRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-G-LQITLHCGEIPN--KE 232 (269)
Q Consensus 164 ~~~-------~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-g-l~~t~HAGE~~~--~e 232 (269)
++. .| .+++.+.+.++.+.+..-+.+.=-|..|. ..|....++++..++. . +++.+|.--+.| ..
T Consensus 140 l~~~~~~e~~~~-~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~---~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~a 215 (295)
T 1ydn_A 140 VSCVVECPYDGP-VTPQAVASVTEQLFSLGCHEVSLGDTIGR---GTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALD 215 (295)
T ss_dssp EECSSEETTTEE-CCHHHHHHHHHHHHHHTCSEEEEEETTSC---CCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHH
T ss_pred EEEEecCCcCCC-CCHHHHHHHHHHHHhcCCCEEEecCCCCC---cCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHH
Confidence 222 23 46888999999888876666666688886 4578888888888775 3 889999966654 47
Q ss_pred HHHHHHhcCCCcccccc-----------cC----CHHHHHHHHhCCCc
Q 024296 233 EIQSMLDFLPQRIGHAC-----------CF----EEEEWRKLKSSKIP 265 (269)
Q Consensus 233 ~i~~ai~l~a~RIGHG~-----------~~----~~~l~~~l~~~~I~ 265 (269)
|+..|++.|+++|.=.+ +. .++++..|...++.
T Consensus 216 n~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~~~g~~ 263 (295)
T 1ydn_A 216 NIRVSLEKGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHEMGFE 263 (295)
T ss_dssp HHHHHHHHTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHHHTTCB
T ss_pred HHHHHHHhCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHHhcCCC
Confidence 88999999999986444 11 24566667666543
No 38
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=94.05 E-value=0.35 Score=41.30 Aligned_cols=62 Identities=11% Similarity=0.087 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCCCc-ccccccCCHHHHHHHHhCCCceeeC
Q 024296 206 TFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQR-IGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 206 ~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a~R-IGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
.|.+.++.|++.|+|+.+|.+.. .+.+.+.+. .+..| |-|.+.-+++.++.+.+.|+-+.++
T Consensus 127 ~f~~~~~la~~~~lPv~iH~~~a--~~~~~~il~~~~~~~~v~H~~~g~~~~~~~~~~~g~~i~~~ 190 (272)
T 2y1h_A 127 VLIRQIQLAKRLNLPVNVHSRSA--GRPTINLLQEQGAEKVLLHAFDGRPSVAMEGVRAGYFFSIP 190 (272)
T ss_dssp HHHHHHHHHHHHTCCEEEECTTC--HHHHHHHHHHTTCCSEEEETCCSCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHhCCcEEEEeCCc--HHHHHHHHHhCCCCCEEEEccCCCHHHHHHHHHCCCEEEEC
Confidence 48888999999999999999863 445666665 55544 5688766777778888889887764
No 39
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=93.98 E-value=1.5 Score=38.82 Aligned_cols=205 Identities=14% Similarity=0.057 Sum_probs=127.3
Q ss_pred CCCCHHHHHHHHHHhccCCCccch-----hhHHHHhhcCCCHHHHHHHhH-----HHHHhhCCHHHHHHHHHHHHHHHHh
Q 024296 18 GSIRDSTLLELARVLGEKGVIVFS-----DVEHVIMKSDRSLHEVFKLFD-----LIHVLTTDHATVTRITQEVVEDFAS 87 (269)
Q Consensus 18 Gs~~~~tl~~la~~~~~~g~~~~~-----~~~~~~~~~~~~l~~f~~~f~-----~~~~l~~~~~~~~~~~~~~~~~~~~ 87 (269)
-.++.+..+++++...+.|+...+ ..+ ..+ ...+..++++... .+..+..+..+ ++.+.+
T Consensus 23 ~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~-~~p-~~~d~~~~~~~~~~~~~~~~~~l~~~~~~--------i~~a~~ 92 (307)
T 1ydo_A 23 VWIATEDKITWINQLSRTGLSYIEITSFVHPK-WIP-ALRDAIDVAKGIDREKGVTYAALVPNQRG--------LENALE 92 (307)
T ss_dssp SCCCHHHHHHHHHHHHTTTCSEEEEEECSCTT-TCG-GGTTHHHHHHHSCCCTTCEEEEECCSHHH--------HHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCcCcc-ccc-ccCCHHHHHHHhhhcCCCeEEEEeCCHHh--------HHHHHh
Confidence 457889999988877666754311 100 000 0123333333321 01122233333 344455
Q ss_pred cCCeEEEEecCCCC-c--ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceEEEEE
Q 024296 88 ENIVYLELRTTPKR-N--ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLL 164 (269)
Q Consensus 88 dnV~Y~Elr~~p~~-~--~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~ 164 (269)
-|+..+-+..+... + ..-+.|.++.++.+.+.++.+++ .|+.++.-+
T Consensus 93 ~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~------------------------------~G~~v~~~i 142 (307)
T 1ydo_A 93 GGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQK------------------------------ANLTTRAYL 142 (307)
T ss_dssp HTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHH------------------------------TTCEEEEEE
T ss_pred CCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH------------------------------CCCEEEEEE
Confidence 58887766554322 1 23467899999999999987754 355555433
Q ss_pred EEeC------CCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc--CCceeeecCCCCC--hhHH
Q 024296 165 SIDR------RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ--GLQITLHCGEIPN--KEEI 234 (269)
Q Consensus 165 ~~~R------~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~--gl~~t~HAGE~~~--~e~i 234 (269)
+..= ..+++.+.+.++.+.+...+.|.=-|.+|. ..|.....+++..++. ++++.+|+--+.| ..|.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~ 219 (307)
T 1ydo_A 143 STVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGA---ANPAQVETVLEALLARFPANQIALHFHDTRGTALANM 219 (307)
T ss_dssp ECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCC---CCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHH
T ss_pred EEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC---cCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHH
Confidence 3311 136888888888888877677777788884 4578888888888875 5899999977665 4688
Q ss_pred HHHHhcCCCccccccc---------------CCHHHHHHHHhCCCc
Q 024296 235 QSMLDFLPQRIGHACC---------------FEEEEWRKLKSSKIP 265 (269)
Q Consensus 235 ~~ai~l~a~RIGHG~~---------------~~~~l~~~l~~~~I~ 265 (269)
..|++.|+++|.=.+. ..++++..|...++.
T Consensus 220 laAv~aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~~g~~ 265 (307)
T 1ydo_A 220 VTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMDIK 265 (307)
T ss_dssp HHHHHHTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHHTTCB
T ss_pred HHHHHhCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHhcCCC
Confidence 8999999999854332 124677777766553
No 40
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.91 E-value=1.7 Score=38.23 Aligned_cols=206 Identities=14% Similarity=0.039 Sum_probs=124.9
Q ss_pred CCCCCHHHHHHHHHHhccCCCccch-----hhHHHHhhcCCCHHHHHHHhHH-----HHHhhCCHHHHHHHHHHHHHHHH
Q 024296 17 NGSIRDSTLLELARVLGEKGVIVFS-----DVEHVIMKSDRSLHEVFKLFDL-----IHVLTTDHATVTRITQEVVEDFA 86 (269)
Q Consensus 17 ~Gs~~~~tl~~la~~~~~~g~~~~~-----~~~~~~~~~~~~l~~f~~~f~~-----~~~l~~~~~~~~~~~~~~~~~~~ 86 (269)
.-.++.+..+++++...+.|++... ..+ ... ...+..++++.... +..++.+. +-++.+.
T Consensus 24 ~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~l~~~~--------~~i~~a~ 93 (302)
T 2ftp_A 24 KQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPK-WVP-QMAGSAEVFAGIRQRPGVTYAALAPNL--------KGFEAAL 93 (302)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCSEEEEEECSCTT-TCG-GGTTHHHHHHHSCCCTTSEEEEECCSH--------HHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCcCEEEECCCcCcc-ccc-cccCHHHHHHHhhhcCCCEEEEEeCCH--------HHHHHHH
Confidence 3467888888888776556654311 100 000 01233333332210 11122333 3444555
Q ss_pred hcCCeEEEEecCCCC-c--ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceEEEE
Q 024296 87 SENIVYLELRTTPKR-N--ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLL 163 (269)
Q Consensus 87 ~dnV~Y~Elr~~p~~-~--~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli 163 (269)
+-|+..+-+..+... + ..-+.|.++.++.+.+.++.+++ .|+.++.-
T Consensus 94 ~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~------------------------------~G~~V~~~ 143 (302)
T 2ftp_A 94 ESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQ------------------------------HQVRVRGY 143 (302)
T ss_dssp HTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHH------------------------------TTCEEEEE
T ss_pred hCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH------------------------------CCCeEEEE
Confidence 668876655433221 1 23457899999999999887654 34555433
Q ss_pred EEEeC------CCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc--CCceeeecCCCCC--hhH
Q 024296 164 LSIDR------RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ--GLQITLHCGEIPN--KEE 233 (269)
Q Consensus 164 ~~~~R------~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~--gl~~t~HAGE~~~--~e~ 233 (269)
++..= ..+++.+.+.++.+.+...+.+.=-|..|. ..|....++++..++. ++++.+|+--+.| ..|
T Consensus 144 l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An 220 (302)
T 2ftp_A 144 ISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGV---GTAGATRRLIEAVASEVPRERLAGHFHDTYGQALAN 220 (302)
T ss_dssp EECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSC---CCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHH
T ss_pred EEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---cCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHH
Confidence 32210 146888888888888876666655588886 4578888888888775 5899999966654 578
Q ss_pred HHHHHhcCCCccccccc-----------C----CHHHHHHHHhCCCc
Q 024296 234 IQSMLDFLPQRIGHACC-----------F----EEEEWRKLKSSKIP 265 (269)
Q Consensus 234 i~~ai~l~a~RIGHG~~-----------~----~~~l~~~l~~~~I~ 265 (269)
+..|++.|+++|.=.+. . .++++..|...++.
T Consensus 221 ~laAv~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~~g~~ 267 (302)
T 2ftp_A 221 IYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGLEIH 267 (302)
T ss_dssp HHHHHHTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHHTTCB
T ss_pred HHHHHHhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHhcCCC
Confidence 99999999999864432 1 24677777766653
No 41
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=93.90 E-value=1.4 Score=40.18 Aligned_cols=134 Identities=9% Similarity=0.028 Sum_probs=93.1
Q ss_pred HHHHHhcCCeEEEEecCCCC--cccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCC--
Q 024296 82 VEDFASENIVYLELRTTPKR--NESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKK-- 157 (269)
Q Consensus 82 ~~~~~~dnV~Y~Elr~~p~~--~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 157 (269)
++.+.+-|+..+-+..+... ....+.|.++.++.+.+.++.+++ .|
T Consensus 80 i~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~------------------------------~g~~ 129 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIRE------------------------------AAPH 129 (382)
T ss_dssp HHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHH------------------------------HCTT
T ss_pred HHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHH------------------------------cCCC
Confidence 35556678888777654221 124467889999999999887754 13
Q ss_pred ceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCC--hh
Q 024296 158 IYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPN--KE 232 (269)
Q Consensus 158 i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~--~e 232 (269)
+.+++-+.-.-..+++.+.+.++.+.+. .+.|.=-|.+|-= .|..+..+++..++. ++++.+|+--+.| ..
T Consensus 130 ~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l~DT~G~~---~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvA 205 (382)
T 2ztj_A 130 VEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGLADTVGVA---TPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIA 205 (382)
T ss_dssp SEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEEEETTSCC---CHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHH
T ss_pred EEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEecCCCCCC---CHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHH
Confidence 5555444322234678888888888888 7777777888853 467777788877764 6899999988776 36
Q ss_pred HHHHHHhcCCCcccccc
Q 024296 233 EIQSMLDFLPQRIGHAC 249 (269)
Q Consensus 233 ~i~~ai~l~a~RIGHG~ 249 (269)
|...|++.|+++|.=.+
T Consensus 206 N~laAv~aGa~~vd~tv 222 (382)
T 2ztj_A 206 NAYEAIEAGATHVDTTI 222 (382)
T ss_dssp HHHHHHHTTCCEEEEBG
T ss_pred HHHHHHHhCCCEEEEcc
Confidence 78889999999987333
No 42
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=93.89 E-value=0.15 Score=45.30 Aligned_cols=81 Identities=21% Similarity=0.197 Sum_probs=56.4
Q ss_pred CceEEEecCCCCC---CCChhhHHHHHHHHHH-cCCceeeecCCCCC-hhHHHHHHhcCCCcccccccCCH---------
Q 024296 188 LGVVGIDLSGNPT---KGEWTTFLPALKFARE-QGLQITLHCGEIPN-KEEIQSMLDFLPQRIGHACCFEE--------- 253 (269)
Q Consensus 188 ~~vvGidl~G~E~---~~~~~~f~~~f~~ar~-~gl~~t~HAGE~~~-~e~i~~ai~l~a~RIGHG~~~~~--------- 253 (269)
.+++|+...+... ....+.+..+++.|++ .|+++.+|+++... .+.+.++++.| +.+.|.+...+
T Consensus 148 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~~~~~~~~~~g-~~~~H~~~~~~~~~~~~s~~ 226 (379)
T 2ics_A 148 DFVVGIKARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALMEKG-DVLTHCFNGKENGILDQATD 226 (379)
T ss_dssp TTEEEEEEEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHHHHHCCTT-CEEESTTCCSTTSSEETTTT
T ss_pred CcceEEEEeccccccccchHHHHHHHHHHHHHhcCCeEEEeCCCCcchHHHHHHHhhcC-CeeeeccCCCccchhhccCH
Confidence 4688776654311 1234668889999999 99999999998543 35565655445 67788764322
Q ss_pred ---HHHHHHHhCCCceeeC
Q 024296 254 ---EEWRKLKSSKIPVRIS 269 (269)
Q Consensus 254 ---~l~~~l~~~~I~lEic 269 (269)
+.++.++++++.+++|
T Consensus 227 ~~~~~~~~~~~~g~~~~~~ 245 (379)
T 2ics_A 227 KIKDFAWQAYNKGVVFDIG 245 (379)
T ss_dssp EECHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHHHcCCEEEec
Confidence 6788888999988875
No 43
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=93.71 E-value=1.4 Score=38.58 Aligned_cols=131 Identities=15% Similarity=0.072 Sum_probs=93.8
Q ss_pred HHHHHhcCCeEEEEecCCCC-c--ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCc
Q 024296 82 VEDFASENIVYLELRTTPKR-N--ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKI 158 (269)
Q Consensus 82 ~~~~~~dnV~Y~Elr~~p~~-~--~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 158 (269)
++.+.+-|+..+-+..+... + ..-+.+.++.++.+.+.++.+++ .|+
T Consensus 86 i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~------------------------------~G~ 135 (298)
T 2cw6_A 86 FEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQS------------------------------ANI 135 (298)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHH------------------------------TTC
T ss_pred HHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH------------------------------CCC
Confidence 55566678887777543321 1 12356889999999999987754 355
Q ss_pred eEEEEEEE-------eCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc--CCceeeecCCCC
Q 024296 159 YVRLLLSI-------DRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ--GLQITLHCGEIP 229 (269)
Q Consensus 159 ~~rli~~~-------~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~--gl~~t~HAGE~~ 229 (269)
.++.-++. .| .+++.+.+.++.+.+...+.|.=-|.+|. ..|.++..+++..++. ++++.+|+--+.
T Consensus 136 ~v~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~ 211 (298)
T 2cw6_A 136 SVRGYVSCALGCPYEGK-ISPAKVAEVTKKFYSMGCYEISLGDTIGV---GTPGIMKDMLSAVMQEVPLAALAVHCHDTY 211 (298)
T ss_dssp EEEEEEETTTCBTTTBS-CCHHHHHHHHHHHHHTTCSEEEEEETTSC---CCHHHHHHHHHHHHHHSCGGGEEEEEBCTT
T ss_pred eEEEEEEEEeeCCcCCC-CCHHHHHHHHHHHHHcCCCEEEecCCCCC---cCHHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 66544432 13 46888888888888877666777788874 3578888888888775 588999998877
Q ss_pred C--hhHHHHHHhcCCCccc
Q 024296 230 N--KEEIQSMLDFLPQRIG 246 (269)
Q Consensus 230 ~--~e~i~~ai~l~a~RIG 246 (269)
+ ..|...|++.|+++|.
T Consensus 212 Gla~An~laA~~aGa~~vd 230 (298)
T 2cw6_A 212 GQALANTLMALQMGVSVVD 230 (298)
T ss_dssp SCHHHHHHHHHHTTCCEEE
T ss_pred chHHHHHHHHHHhCCCEEE
Confidence 6 3678899999999885
No 44
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=93.36 E-value=1.1 Score=40.03 Aligned_cols=149 Identities=9% Similarity=0.011 Sum_probs=99.5
Q ss_pred HHHHHHhcCCeEEEEecCCCC-c--ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCC
Q 024296 81 VVEDFASENIVYLELRTTPKR-N--ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKK 157 (269)
Q Consensus 81 ~~~~~~~dnV~Y~Elr~~p~~-~--~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (269)
-++.+.+-|+..+-+.++... + ..-+.+.++.++.+.+.++.+++ .|
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~------------------------------~G 150 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIK------------------------------SG 150 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHH------------------------------TT
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH------------------------------CC
Confidence 355566678888777654322 1 23467899999999999887654 35
Q ss_pred ceEEEEEEE---eCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc--CCceeeecCCCCC--
Q 024296 158 IYVRLLLSI---DRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ--GLQITLHCGEIPN-- 230 (269)
Q Consensus 158 i~~rli~~~---~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~--gl~~t~HAGE~~~-- 230 (269)
+.+++-+.. .-..+++...+.++.+.+...+.|.=-|.+|-= .|.+...+++..++. ++++.+|+--+.|
T Consensus 151 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~---~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA 227 (337)
T 3ble_A 151 LKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVL---SPEETFQGVDSLIQKYPDIHFEFHGHNDYDLS 227 (337)
T ss_dssp CEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCCC---CHHHHHHHHHHHHHHCTTSCEEEECBCTTSCH
T ss_pred CEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCCc---CHHHHHHHHHHHHHhcCCCeEEEEecCCcchH
Confidence 555533321 111246666777777776655666666777743 467788888888764 7999999988876
Q ss_pred hhHHHHHHhcCCCccccccc-----C----CHHHHHHHHhC
Q 024296 231 KEEIQSMLDFLPQRIGHACC-----F----EEEEWRKLKSS 262 (269)
Q Consensus 231 ~e~i~~ai~l~a~RIGHG~~-----~----~~~l~~~l~~~ 262 (269)
..|...|++.|+++|.=.+. . .++++..|..+
T Consensus 228 ~AN~laAv~aGa~~vd~tv~GlG~~aGN~~~E~lv~~L~~~ 268 (337)
T 3ble_A 228 VANSLQAIRAGVKGLHASINGLGERAGNTPLEALVTTIHDK 268 (337)
T ss_dssp HHHHHHHHHTTCSEEEEBGGGCSSTTCBCBHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHHHHh
Confidence 36788999999999874332 1 25666666655
No 45
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=92.63 E-value=0.31 Score=41.23 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=53.3
Q ss_pred ceEEEecCCCCCCCC--hhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cC-C-Cc-ccccccCCHHHHHHHHhC
Q 024296 189 GVVGIDLSGNPTKGE--WTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FL-P-QR-IGHACCFEEEEWRKLKSS 262 (269)
Q Consensus 189 ~vvGidl~G~E~~~~--~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~-a-~R-IGHG~~~~~~l~~~l~~~ 262 (269)
|.+|+|+........ -+.|.+.++.|++.|+++.+|.++ .++.+.+.+. .+ + .| |-|++.-.++.++.+.+.
T Consensus 93 Ge~Gl~~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~--~~~~~~~~l~~~~~p~~~~v~H~~~~~~~~~~~~~~~ 170 (265)
T 1yix_A 93 GETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRD--ARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDL 170 (265)
T ss_dssp EEEEEECTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES--CHHHHHHHHHHTTGGGTCEEETTCCSCHHHHHHHHTT
T ss_pred EccccCCCcCCCChHHHHHHHHHHHHHHHHhCCCEEEEecC--chHHHHHHHHhcCCCCCCEEEEcCCCCHHHHHHHHHC
Confidence 345677654221111 145888999999999999999986 3555666665 43 2 13 458877777778888888
Q ss_pred CCceeeC
Q 024296 263 KIPVRIS 269 (269)
Q Consensus 263 ~I~lEic 269 (269)
|+-+.+|
T Consensus 171 g~~~~~s 177 (265)
T 1yix_A 171 GFYISFS 177 (265)
T ss_dssp TCEEEEC
T ss_pred CcEEEEC
Confidence 8887764
No 46
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=92.38 E-value=0.54 Score=41.07 Aligned_cols=63 Identities=14% Similarity=0.187 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCC--Cc-ccccccCCHHHHHHHHhCCCceeeC
Q 024296 205 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLP--QR-IGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a--~R-IGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
+.|.+.++.|++.|+|+.+|.++ ..+.+.+.+. .+. .+ |.|++.-+.+.++.+.+.|+-+.++
T Consensus 127 ~~f~~ql~lA~~~~lPv~iH~r~--a~~~~~~il~~~~~~~~~~i~H~f~g~~~~~~~~l~~g~yi~~~ 193 (301)
T 2xio_A 127 KYFEKQFELSEQTKLPMFLHCRN--SHAEFLDITKRNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFN 193 (301)
T ss_dssp HHHHHTHHHHHHHCCCEEEEEES--CHHHHHHHHHHTGGGSSCEEETTCCCCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHhCCcEEEEecC--chHHHHHHHHhccCCCCcEEEEccCCCHHHHHHHHhcCcEEEEc
Confidence 35788889999999999999986 3455666665 432 23 7888766777777777888877653
No 47
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=91.79 E-value=3.6 Score=38.06 Aligned_cols=133 Identities=14% Similarity=0.015 Sum_probs=86.3
Q ss_pred HHHHhcCCeEEEEecC--CCCc-ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCce
Q 024296 83 EDFASENIVYLELRTT--PKRN-ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIY 159 (269)
Q Consensus 83 ~~~~~dnV~Y~Elr~~--p~~~-~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 159 (269)
+.+.+-|+..+-+.++ +... ...+.+.+++++.+.+.++.+++ .|+.
T Consensus 117 ~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~------------------------------~G~~ 166 (423)
T 3ivs_A 117 RVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKS------------------------------KGIE 166 (423)
T ss_dssp HHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHT------------------------------TTCE
T ss_pred HHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHH------------------------------CCCE
Confidence 4445568877666543 2211 12356778888888888877643 3666
Q ss_pred EEEEEE-EeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc-CCceeeecCCCCC--hhHHH
Q 024296 160 VRLLLS-IDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPN--KEEIQ 235 (269)
Q Consensus 160 ~rli~~-~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-gl~~t~HAGE~~~--~e~i~ 235 (269)
+++-.. ..| .+++.+.++++.+.+...+.|.=-|.+|-= .|..+..+++..++. ++++.+|+--+.+ ..|..
T Consensus 167 V~~~~eda~r-~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~---~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~l 242 (423)
T 3ivs_A 167 VRFSSEDSFR-SDLVDLLSLYKAVDKIGVNRVGIADTVGCA---TPRQVYDLIRTLRGVVSCDIECHFHNDTGMAIANAY 242 (423)
T ss_dssp EEEEEESGGG-SCHHHHHHHHHHHHHHCCSEEEEEETTSCC---CHHHHHHHHHHHHHHCSSEEEEEEBCTTSCHHHHHH
T ss_pred EEEEEccCcC-CCHHHHHHHHHHHHHhCCCccccCCccCcC---CHHHHHHHHHHHHhhcCCeEEEEECCCCchHHHHHH
Confidence 665432 223 467778888888888766667777888743 466777777776654 8999999988776 36788
Q ss_pred HHHhcCCCcccccc
Q 024296 236 SMLDFLPQRIGHAC 249 (269)
Q Consensus 236 ~ai~l~a~RIGHG~ 249 (269)
.|++.|+++|.=-+
T Consensus 243 aAv~aGa~~vd~ti 256 (423)
T 3ivs_A 243 CALEAGATHIDTSI 256 (423)
T ss_dssp HHHHTTCCEEEEBG
T ss_pred HHHHhCCCEEEEec
Confidence 89999999985433
No 48
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=91.38 E-value=3.5 Score=36.07 Aligned_cols=204 Identities=14% Similarity=0.089 Sum_probs=117.3
Q ss_pred CCCCCHHHHHHHHHHhccCCCccchhhHHHHhh-cCCCHHHHHHHhH-H-----HHHhhC-CHHHHHHHHHHHHHHHHhc
Q 024296 17 NGSIRDSTLLELARVLGEKGVIVFSDVEHVIMK-SDRSLHEVFKLFD-L-----IHVLTT-DHATVTRITQEVVEDFASE 88 (269)
Q Consensus 17 ~Gs~~~~tl~~la~~~~~~g~~~~~~~~~~~~~-~~~~l~~f~~~f~-~-----~~~l~~-~~~~~~~~~~~~~~~~~~d 88 (269)
.-.++.+.-+++++...+.|+...+ -.+.. ...++. +++... . +..+.. .+.++.+ .++.+..-
T Consensus 21 ~~~~~~~~K~~i~~~L~~~Gv~~IE---~g~p~~~~~d~e-~v~~i~~~~~~~~i~~l~~~~~~di~~----a~~~~~~a 92 (293)
T 3ewb_X 21 GVNFDVKEKIQIALQLEKLGIDVIE---AGFPISSPGDFE-CVKAIAKAIKHCSVTGLARCVEGDIDR----AEEALKDA 92 (293)
T ss_dssp --CCCHHHHHHHHHHHHHHTCSEEE---EECGGGCHHHHH-HHHHHHHHCCSSEEEEEEESSHHHHHH----HHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEE---EeCCCCCccHHH-HHHHHHHhcCCCEEEEEecCCHHHHHH----HHHHHhhc
Confidence 3468888888888876555654311 00000 001111 222111 0 112232 2344433 33333334
Q ss_pred CCeEEEEecCCCC-c--ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceEEEEEE
Q 024296 89 NIVYLELRTTPKR-N--ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLS 165 (269)
Q Consensus 89 nV~Y~Elr~~p~~-~--~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~ 165 (269)
|+..+-+..+-.. + ...+.|.++.++.+.+.++.+++ .+..+++-..
T Consensus 93 g~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~------------------------------~g~~v~~~~~ 142 (293)
T 3ewb_X 93 VSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQ------------------------------KFDVVQFSPE 142 (293)
T ss_dssp SSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHT------------------------------TCSCEEEEEE
T ss_pred CCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHh------------------------------CCCEEEEEec
Confidence 6665555433211 1 23468999999999998887643 2455554222
Q ss_pred EeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc-----CCceeeecCCCCC--hhHHHHHH
Q 024296 166 IDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-----GLQITLHCGEIPN--KEEIQSML 238 (269)
Q Consensus 166 ~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-----gl~~t~HAGE~~~--~e~i~~ai 238 (269)
-.-..+++...++++.+.+...+.|.=-|.+|- ..|.....+++..++. ++++.+|+--+.| ..|...|+
T Consensus 143 d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~ 219 (293)
T 3ewb_X 143 DATRSDRAFLIEAVQTAIDAGATVINIPDTVGY---TNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAI 219 (293)
T ss_dssp TGGGSCHHHHHHHHHHHHHTTCCEEEEECSSSC---CCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCC---CCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHH
Confidence 111256788888888888776666666677775 4567788888877764 2789999988876 46888999
Q ss_pred hcCCCccccccc-----C----CHHHHHHHHh
Q 024296 239 DFLPQRIGHACC-----F----EEEEWRKLKS 261 (269)
Q Consensus 239 ~l~a~RIGHG~~-----~----~~~l~~~l~~ 261 (269)
+.|+++|.=.+. . .++++-.|..
T Consensus 220 ~aGa~~vd~sv~GlGeraGN~~~E~vv~~L~~ 251 (293)
T 3ewb_X 220 ENGARRVEGTINGIGERAGNTALEEVAVALHI 251 (293)
T ss_dssp HTTCCEEEEBGGGCCTTTCBCBHHHHHHHHHH
T ss_pred HhCCCEEEeeccccccccccHhHHHHHHHHHh
Confidence 999999854332 1 2466666654
No 49
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=91.37 E-value=2 Score=38.49 Aligned_cols=88 Identities=11% Similarity=0.101 Sum_probs=59.0
Q ss_pred CCCHHHHHHHHHHHHhhCCCceEEEecC--CC-CCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcc
Q 024296 169 RETTEAAMETVKLALEMRDLGVVGIDLS--GN-PTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRI 245 (269)
Q Consensus 169 ~~~~~~~~~~~~~a~~~~~~~vvGidl~--G~-E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RI 245 (269)
..++++..+.++.+.+.. +..|-+. |. ....+.+.+.++++.+++.|+.+++..|- .+++.+....+.|.+|+
T Consensus 98 ~~s~eei~~~~~~~~~~g---~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~~t~G~-l~~e~l~~L~~aGvd~v 173 (369)
T 1r30_A 98 LMEVEQVLESARKAKAAG---STRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGT-LSESQAQRLANAGLDYY 173 (369)
T ss_dssp CCCHHHHHHHHHHHHHTT---CSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEEEECSS-CCHHHHHHHHHHCCCEE
T ss_pred cCCHHHHHHHHHHHHHcC---CcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCC-CCHHHHHHHHHCCCCEE
Confidence 456777777776665532 2233333 21 22244577888999999999999888886 35666666667899999
Q ss_pred cccccCCHHHHHHHH
Q 024296 246 GHACCFEEEEWRKLK 260 (269)
Q Consensus 246 GHG~~~~~~l~~~l~ 260 (269)
.+|+..+++.++.+.
T Consensus 174 ~i~les~~e~~~~i~ 188 (369)
T 1r30_A 174 NHNLDTSPEFYGNII 188 (369)
T ss_dssp ECCCBSCHHHHHHHC
T ss_pred eecCcCCHHHHHHhC
Confidence 999877666554443
No 50
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=91.13 E-value=0.44 Score=40.78 Aligned_cols=62 Identities=18% Similarity=0.192 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cC---CCcccccccCCHHHHHHHHhCCCceee
Q 024296 205 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FL---PQRIGHACCFEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~---a~RIGHG~~~~~~l~~~l~~~~I~lEi 268 (269)
+.|.+.++.|++.|+++.+|.++ .++.+.+.+. ++ ..-|-|+..-..+.++.+.+.|+-+.+
T Consensus 120 ~~f~~~~~~a~~~~lPv~iH~~~--~~~~~~~il~~~p~~~~~~I~H~~~g~~~~~~~~~~~g~y~~~ 185 (268)
T 1j6o_A 120 RVFVEQIELAGKLNLPLVVHIRD--AYSEAYEILRTESLPEKRGVIHAFSSDYEWAKKFIDLGFLLGI 185 (268)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEES--CHHHHHHHHHHSCCCSSCEEETTCCSCHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEeCc--hHHHHHHHHHhcCCCCCCEEEEcCCCCHHHHHHHHHCCCeEEe
Confidence 45889999999999999999985 4566777665 54 244669877677767777666776654
No 51
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=89.70 E-value=0.38 Score=43.52 Aligned_cols=65 Identities=18% Similarity=0.175 Sum_probs=44.1
Q ss_pred hhhHHHHHHHHHHcCCceeeecCCCCC-hhHHHHHHhcCCCcccccccCCH-----------HHHHHHHhCCCceeeC
Q 024296 204 WTTFLPALKFAREQGLQITLHCGEIPN-KEEIQSMLDFLPQRIGHACCFEE-----------EEWRKLKSSKIPVRIS 269 (269)
Q Consensus 204 ~~~f~~~f~~ar~~gl~~t~HAGE~~~-~e~i~~ai~l~a~RIGHG~~~~~-----------~l~~~l~~~~I~lEic 269 (269)
...+..+++.|++.|+++.+|+|+... .+.+..++..| +.+.|++...| +.++.++++++.+++|
T Consensus 188 ~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~l~~g-~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v~~~ 264 (417)
T 2ogj_A 188 VTPVKLGKKIAKILKVPMMVHVGEPPALYDEVLEILGPG-DVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRLDIG 264 (417)
T ss_dssp THHHHHHHHHHHHHTCCEEEEECSSSSCHHHHHHHCCTT-CEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEEECC
T ss_pred HHHHHHHHHHHHHcCCcEEEEcCCCcccHHHHHHHhcCC-CEEEeccCCCccchhccCHHHHHHHHHHHhcCcEEEec
Confidence 456777889999999999999998542 34454554445 78888765322 3566777888877654
No 52
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=89.38 E-value=1.9 Score=36.56 Aligned_cols=93 Identities=13% Similarity=0.087 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc-CCceeeecCCCCC---hhHHHHHHh-cCCCcccc
Q 024296 173 EAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPN---KEEIQSMLD-FLPQRIGH 247 (269)
Q Consensus 173 ~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-gl~~t~HAGE~~~---~e~i~~ai~-l~a~RIGH 247 (269)
+.+.+.++.+. ...+++||...|.... .-+.|.++++.|.+. |+++.+|.|...+ +..+.+.++ +.--||-|
T Consensus 101 ~~~~~el~~~~--~~~g~~gi~~~g~~~~-~~~~~~~~~~~a~~~~~lpv~iH~~~~~~~~~~~~~~~~l~~~p~l~iv~ 177 (272)
T 3cjp_A 101 NDTNSYIEENI--VNNKLVGIGELTPASG-QIKSLKPIFKYSMDSGSLPIWIHAFNPLVLQDIKEIAELCKAFPKVPVIL 177 (272)
T ss_dssp HHHHHHHHHHT--TTTTCSEEEEECCCTT-CGGGGHHHHHHHHHTTCCCEEECCSTTCCHHHHHHHHHHHHHSTTSCEEE
T ss_pred HHHHHHHHHHH--HhcCceEEEecCCCCC-ccHHHHHHHHHHHhccCCcEEEeCCCCCccccHHHHHHHHHHCCCceEEE
Confidence 34444444332 2457888887775433 446799999999998 9999999996433 234445554 43246655
Q ss_pred cccC---CHHHHHHHHh-CCCceee
Q 024296 248 ACCF---EEEEWRKLKS-SKIPVRI 268 (269)
Q Consensus 248 G~~~---~~~l~~~l~~-~~I~lEi 268 (269)
+..- ..+.++.+++ .++-+.+
T Consensus 178 ~H~G~~~~~~~~~~~~~~~~~y~~~ 202 (272)
T 3cjp_A 178 GHMGGSNWMTAVELAKEIQNLYLDT 202 (272)
T ss_dssp GGGGGGGHHHHHHHHHHCTTEEEEC
T ss_pred ECCCCccHHHHHHHHHhCCCEEEEe
Confidence 4322 1244555544 4655554
No 53
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=88.94 E-value=1.3 Score=39.19 Aligned_cols=78 Identities=21% Similarity=0.155 Sum_probs=56.9
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCC-CCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCccccc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPT-KGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHA 248 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~-~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG 248 (269)
.++++..+.++.+.+. ++..|-+.|.|. ..+++.+.++++.+++.|+.+++..|.. +++.+....+.|.+++.+|
T Consensus 84 ls~eei~~~i~~~~~~---g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~l-~~e~l~~L~~ag~~~v~i~ 159 (348)
T 3iix_A 84 MTPEEIVERARLAVQF---GAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGEW-PREYYEKWKEAGADRYLLR 159 (348)
T ss_dssp CCHHHHHHHHHHHHHT---TCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCCC-CHHHHHHHHHHTCCEEECC
T ss_pred CCHHHHHHHHHHHHHC---CCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCCC-CHHHHHHHHHhCCCEEeee
Confidence 4677777777766553 355566677773 2344678889999988899999988874 5666666667899999988
Q ss_pred ccC
Q 024296 249 CCF 251 (269)
Q Consensus 249 ~~~ 251 (269)
+..
T Consensus 160 let 162 (348)
T 3iix_A 160 HET 162 (348)
T ss_dssp CBC
T ss_pred eee
Confidence 764
No 54
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=88.73 E-value=7.3 Score=35.26 Aligned_cols=189 Identities=12% Similarity=0.077 Sum_probs=112.2
Q ss_pred CCCCHHHHHHHHHHhccCCCccchhhHHHHhh-cCCCHHHHHHHh-H-----HHHHhhC-CHHHHHHHHHHHHHHHHhcC
Q 024296 18 GSIRDSTLLELARVLGEKGVIVFSDVEHVIMK-SDRSLHEVFKLF-D-----LIHVLTT-DHATVTRITQEVVEDFASEN 89 (269)
Q Consensus 18 Gs~~~~tl~~la~~~~~~g~~~~~~~~~~~~~-~~~~l~~f~~~f-~-----~~~~l~~-~~~~~~~~~~~~~~~~~~dn 89 (269)
-+++.+.-+++++...+.|+...+ -.+.. ...++. +++.. . .+..+.+ +..++.+ .++.+..-|
T Consensus 29 ~~~~~~~Kl~ia~~L~~~Gv~~IE---~g~p~~~~~d~e-~v~~i~~~~~~~~i~~l~r~~~~di~~----a~~al~~ag 100 (370)
T 3rmj_A 29 AAMTKEEKIRVARQLEKLGVDIIE---AGFAAASPGDFE-AVNAIAKTITKSTVCSLSRAIERDIRQ----AGEAVAPAP 100 (370)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEE---EEEGGGCHHHHH-HHHHHHTTCSSSEEEEEEESSHHHHHH----HHHHHTTSS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEE---EeCCCCCHHHHH-HHHHHHHhCCCCeEEEEecCCHHHHHH----HHHHHhhCC
Confidence 468888888888876555654311 00000 001111 22111 0 0112222 4444433 333333456
Q ss_pred CeEEEEecCCCC-c--ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceEEEEEEE
Q 024296 90 IVYLELRTTPKR-N--ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSI 166 (269)
Q Consensus 90 V~Y~Elr~~p~~-~--~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~~ 166 (269)
+..+-+..+-.. + ..-+.|.++.++.+.+.++.+++ .+..+. ++.
T Consensus 101 ~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~------------------------------~g~~v~--~~~ 148 (370)
T 3rmj_A 101 KKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIARE------------------------------YTDDVE--FSC 148 (370)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTT------------------------------TCSCEE--EEE
T ss_pred CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHH------------------------------cCCEEE--Eec
Confidence 665555433211 1 24578999999999999887643 344433 222
Q ss_pred e--CCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc--C---CceeeecCCCCC--hhHHHHH
Q 024296 167 D--RRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ--G---LQITLHCGEIPN--KEEIQSM 237 (269)
Q Consensus 167 ~--R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~--g---l~~t~HAGE~~~--~e~i~~a 237 (269)
. -..+++.+.++++.+.+...+.|.==|.+|-= .|..+..+++..++. + +++.+|+--+.| .-|...|
T Consensus 149 ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~---~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laA 225 (370)
T 3rmj_A 149 EDALRSEIDFLAEICGAVIEAGATTINIPDTVGYS---IPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAA 225 (370)
T ss_dssp ETGGGSCHHHHHHHHHHHHHHTCCEEEEECSSSCC---CHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHHcCCCEEEecCccCCc---CHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHH
Confidence 1 12467888888888888766667767777743 467788888877764 3 899999988876 3678899
Q ss_pred HhcCCCcccccc
Q 024296 238 LDFLPQRIGHAC 249 (269)
Q Consensus 238 i~l~a~RIGHG~ 249 (269)
++.|+++|.=-+
T Consensus 226 v~aGa~~vd~tv 237 (370)
T 3rmj_A 226 LKGGARQVECTV 237 (370)
T ss_dssp HHTTCCEEEEBG
T ss_pred HHhCCCEEEEec
Confidence 999999985433
No 55
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=88.19 E-value=6.2 Score=35.09 Aligned_cols=52 Identities=10% Similarity=0.035 Sum_probs=37.3
Q ss_pred ChhhHHHHHHHHHHcCCceeeecCCCC-ChhHHHH-----HHhcCC--Ccccccc---cCCHH
Q 024296 203 EWTTFLPALKFAREQGLQITLHCGEIP-NKEEIQS-----MLDFLP--QRIGHAC---CFEEE 254 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~gl~~t~HAGE~~-~~e~i~~-----ai~l~a--~RIGHG~---~~~~~ 254 (269)
+.+.+..+++.|++.|+++.+|+.|+. ..+.+.+ +...|. .+|.|++ .++++
T Consensus 179 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~H~~~~~~~~~~ 241 (406)
T 1p1m_A 179 SEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDILNIGLKEVKTIAAHCVHLPERYFGVLK 241 (406)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHHTTTTTTSCEEEEECTTCCGGGTTTTT
T ss_pred CHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHHhhhCCHhHcCcceeEeeeccCcccCCHH
Confidence 557788999999999999999998863 3344444 222344 6899999 76543
No 56
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=88.16 E-value=0.8 Score=40.67 Aligned_cols=63 Identities=16% Similarity=0.172 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCCceeeecCCC-CChhHHHHHHh-cCC--Cc--cccccc-CCHHHHHHHHhCCCceeeC
Q 024296 207 FLPALKFAREQGLQITLHCGEI-PNKEEIQSMLD-FLP--QR--IGHACC-FEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 207 f~~~f~~ar~~gl~~t~HAGE~-~~~e~i~~ai~-l~a--~R--IGHG~~-~~~~l~~~l~~~~I~lEic 269 (269)
|....+.|++.|+|+.+|.|-. .....+.+.+. .|. .| |.|... .+.+..+.+.++|.-|.++
T Consensus 150 f~~q~~lA~~~glPv~iH~~~~~r~a~e~l~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~~G~~i~~~ 219 (330)
T 2ob3_A 150 LKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLD 219 (330)
T ss_dssp HHHHHHHHHHHCCCEEEECCGGGTHHHHHHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHhCCeEEEECCCCCCCHHHHHHHHHHcCcCcccEEEeCCCCCCCHHHHHHHHhCCCEEEeC
Confidence 7788888999999999999721 12224444454 454 35 689984 6778888899999887653
No 57
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=88.11 E-value=1.5 Score=37.01 Aligned_cols=62 Identities=23% Similarity=0.462 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cC---CCcccccccCCHHHHHHHHhCCCceeeC
Q 024296 206 TFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FL---PQRIGHACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 206 ~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~---a~RIGHG~~~~~~l~~~l~~~~I~lEic 269 (269)
.|.+.++.|++.|+|+.+|.++. .+.+.+.+. .+ ..-|-|++.-..+.++.+.++|+-+.++
T Consensus 113 ~f~~~l~~a~~~~lpv~iH~~~a--~~~~~~il~~~~~~~~~~v~H~~~g~~~~~~~~~~~g~yi~~~ 178 (264)
T 1xwy_A 113 AFVAQLRIAADLNMPVFMHCRDA--HERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGIT 178 (264)
T ss_dssp HHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHGGGGGGSSCEEECSCCCCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHhCCcEEEEcCCc--hHHHHHHHHhcCCCCCcEEEEccCCCHHHHHHHHHCCeEEEEC
Confidence 48889999999999999999863 455666665 44 2347787666777777788888877654
No 58
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=87.15 E-value=19 Score=33.57 Aligned_cols=105 Identities=11% Similarity=0.102 Sum_probs=72.3
Q ss_pred CceEEEEEEEe--CCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc-CCceeeecCCCCC--h
Q 024296 157 KIYVRLLLSID--RRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPN--K 231 (269)
Q Consensus 157 ~i~~rli~~~~--R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-gl~~t~HAGE~~~--~ 231 (269)
|..++.-+|.. -..+++...+.++.+.+...+.|+=-|.+|-= .|.....+++..++. ++++-+|+--+.| .
T Consensus 140 G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~---~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAv 216 (464)
T 2nx9_A 140 GAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGIL---TPYAAEELVSTLKKQVDVELHLHCHSTAGLAD 216 (464)
T ss_dssp TCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCC---CHHHHHHHHHHHHHHCCSCEEEEECCTTSCHH
T ss_pred CCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCc---CHHHHHHHHHHHHHhcCCeEEEEECCCCChHH
Confidence 55555433332 22468888888888887766667777888853 467777777777664 8999999988776 3
Q ss_pred hHHHHHHhcCCCccccccc-----C-C---HHHHHHHHhCCC
Q 024296 232 EEIQSMLDFLPQRIGHACC-----F-E---EEEWRKLKSSKI 264 (269)
Q Consensus 232 e~i~~ai~l~a~RIGHG~~-----~-~---~~l~~~l~~~~I 264 (269)
.|...|++.|+++|.=.+. . + ++++..|...++
T Consensus 217 AN~laAv~AGa~~VD~ti~g~gertGN~~lE~lv~~L~~~g~ 258 (464)
T 2nx9_A 217 MTLLKAIEAGVDRVDTAISSMSGTYGHPATESLVATLQGTGY 258 (464)
T ss_dssp HHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTTSTT
T ss_pred HHHHHHHHhCCCEEEEeccccCCCCcCHHHHHHHHHHHhcCC
Confidence 6788999999999864443 1 2 456666665543
No 59
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=87.15 E-value=9.4 Score=33.98 Aligned_cols=105 Identities=10% Similarity=-0.040 Sum_probs=73.3
Q ss_pred CceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCC--h
Q 024296 157 KIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPN--K 231 (269)
Q Consensus 157 ~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~--~ 231 (269)
|+.+.+.++..-..+++...++++.+.++.-+.|.=-|.+|.- .|......++..++. ++++.+|+--+.| .
T Consensus 133 G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~---~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~av 209 (345)
T 1nvm_A 133 GMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAM---SMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGV 209 (345)
T ss_dssp TCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCC---CHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHH
T ss_pred CCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCcc---CHHHHHHHHHHHHHhcCCCceEEEEECCCccHHH
Confidence 5565555433334568888888888888755567777777754 377888888888775 6999999988876 3
Q ss_pred hHHHHHHhcCCCccccccc-----C----CHHHHHHHHhCCC
Q 024296 232 EEIQSMLDFLPQRIGHACC-----F----EEEEWRKLKSSKI 264 (269)
Q Consensus 232 e~i~~ai~l~a~RIGHG~~-----~----~~~l~~~l~~~~I 264 (269)
.|...|++.|+++|.=.+. . .++++..|...++
T Consensus 210 An~laA~~aGa~~vd~tv~GlG~~aGN~~le~lv~~L~~~g~ 251 (345)
T 1nvm_A 210 ANSIVAVEEGCDRVDASLAGMGAGAGNAPLEVFIAVAERLGW 251 (345)
T ss_dssp HHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEecchhccCCccCcCHHHHHHHHHhcCC
Confidence 6788899999999864432 1 1456656655443
No 60
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=86.95 E-value=1.7 Score=38.69 Aligned_cols=55 Identities=13% Similarity=0.067 Sum_probs=39.7
Q ss_pred HHHHHHHHHHcCCceee-ecCCCCChhHHHHHHhcCCCc--------------------------------ccccccCCH
Q 024296 207 FLPALKFAREQGLQITL-HCGEIPNKEEIQSMLDFLPQR--------------------------------IGHACCFEE 253 (269)
Q Consensus 207 f~~~f~~ar~~gl~~t~-HAGE~~~~e~i~~ai~l~a~R--------------------------------IGHG~~~~~ 253 (269)
...+.+.|++.|+++.+ |+.|+ .+.+..+++.|.+- |.||+.++|
T Consensus 177 ~~~~~~~a~~~g~~v~~gH~~~~--~~~~~~~~~~G~~~~~h~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~h~~~~~~ 254 (382)
T 1yrr_A 177 PAEVISKLANAGIVVSAGHSNAT--LKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDY 254 (382)
T ss_dssp CHHHHHHHHHTTCEEEECSCCCC--HHHHHHHHHHTCCEESSTTTTSCCBCSSCCHHHHHHHHCTTCEEEEECSSSSSCH
T ss_pred hHHHHHHHHHCCCEEEEECCCCC--HHHHHHHHHcCCCeeEECCCCCCccccCCcchhhHhhcCCcceeeecCcccccCH
Confidence 44688899999999998 99873 56677777665444 455555667
Q ss_pred HHHHHHHhCC
Q 024296 254 EEWRKLKSSK 263 (269)
Q Consensus 254 ~l~~~l~~~~ 263 (269)
+.++++++.+
T Consensus 255 ~~~~~~~~~~ 264 (382)
T 1yrr_A 255 ANIRNAKRLK 264 (382)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHcC
Confidence 7777777654
No 61
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=86.64 E-value=1.4 Score=38.09 Aligned_cols=64 Identities=17% Similarity=0.098 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHcCCceeeecCCC-CChhHHHHHHh-cCCC--c--cccccc-CCHHHHHHHHhCCCceeeC
Q 024296 206 TFLPALKFAREQGLQITLHCGEI-PNKEEIQSMLD-FLPQ--R--IGHACC-FEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 206 ~f~~~f~~ar~~gl~~t~HAGE~-~~~e~i~~ai~-l~a~--R--IGHG~~-~~~~l~~~l~~~~I~lEic 269 (269)
.|...++.|++.|+++.+|.||. .....+.+.+. .|.. | |.|... .+.+.++.++++|.-+.++
T Consensus 152 ~~~~~~~lA~~~~~pv~iH~~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~ 222 (314)
T 2vc7_A 152 VIRAAAIANKETKVPIITHSNAHNNTGLEQQRILTEEGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLD 222 (314)
T ss_dssp HHHHHHHHHHHHCCCEEEECCTTTTHHHHHHHHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHCCEEEEeCCCcccChHHHHHHHHHcCCCcccEEEECCCCCCCHHHHHHHHHcCCEEEEe
Confidence 36667788888999999999862 12234445554 4543 5 568876 4677788888888877654
No 62
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=85.35 E-value=3 Score=34.87 Aligned_cols=63 Identities=16% Similarity=0.108 Sum_probs=41.1
Q ss_pred hhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cC---CCcccccccCCHH-HHHHHHhCCCceeeC
Q 024296 205 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FL---PQRIGHACCFEEE-EWRKLKSSKIPVRIS 269 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~---a~RIGHG~~~~~~-l~~~l~~~~I~lEic 269 (269)
+.|.++++.|++.|+++.+|.+.. .+.+.+.+. ++ ..=|.|...-..+ +.+++...|+-+.++
T Consensus 109 ~~~~~~~~~a~~~~~pv~iH~~~~--~~~~~~~l~~~p~~~~~~i~H~~~g~~~~~~~~l~~~~~y~~~s 176 (265)
T 2gzx_A 109 EVFRKQIALAKRLKLPIIIHNREA--TQDCIDILLEEHAEEVGGIMHSFSGSPEIADIVTNKLNFYISLG 176 (265)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHHHTTGGGTCEEETTCCSCHHHHHHHHHTSCCEEEEC
T ss_pred HHHHHHHHHHHHcCCcEEEEeccc--HHHHHHHHHhcCCCCCcEEEEcCCCCHHHHHHHHHHCCceEEec
Confidence 348889999999999999999863 455666555 44 2336666544433 444443378777654
No 63
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=85.29 E-value=2.5 Score=35.91 Aligned_cols=63 Identities=19% Similarity=0.144 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCCC--c--cccccc-CCHHHHHHHHhCCCceee
Q 024296 206 TFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQ--R--IGHACC-FEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 206 ~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a~--R--IGHG~~-~~~~l~~~l~~~~I~lEi 268 (269)
.|..+++.|++.|+++.+|+|.......+.+.+. .|.. | |.|... .+.+.++.++++|..+.+
T Consensus 139 ~~~~~~~~a~~~~~pv~iH~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~ 207 (291)
T 1bf6_A 139 VFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQF 207 (291)
T ss_dssp HHHHHHHHHHHHCCCEEEECGGGCSHHHHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCeEEEeCCCCCChHHHHHHHHHcCCCchhEEEECCCCCCCHHHHHHHHHCCCEEEE
Confidence 4777888999999999999974222223444443 4643 4 578744 466777788888877765
No 64
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=83.00 E-value=2.9 Score=36.13 Aligned_cols=94 Identities=21% Similarity=0.264 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHhhCCCceEEEecC-CCC-CCC--ChhhHHHHHHHHHHcCCceeeecCCCC-------ChhHHHHHHh-
Q 024296 172 TEAAMETVKLALEMRDLGVVGIDLS-GNP-TKG--EWTTFLPALKFAREQGLQITLHCGEIP-------NKEEIQSMLD- 239 (269)
Q Consensus 172 ~~~~~~~~~~a~~~~~~~vvGidl~-G~E-~~~--~~~~f~~~f~~ar~~gl~~t~HAGE~~-------~~e~i~~ai~- 239 (269)
++.+.+.++.+. ..+++||.+. +.. ... .-+.|.++|+.|.+.|+++.+|.|... .+..+...+.
T Consensus 104 ~~~a~~eL~~~~---~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~~~~~~~~~~p~~~~~v~~~ 180 (291)
T 3irs_A 104 RKEAMAQMQEIL---DLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGGNAGPDITYTNPEHIDRVLGD 180 (291)
T ss_dssp HHHHHHHHHHHH---HTTCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSSSCSSSGGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---hCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCCCCCCCCccCCHHHHHHHHHH
Confidence 344444455432 2468888876 211 111 236799999999999999999999863 2455666665
Q ss_pred cCCCc--ccccccC-CHHHHHHHHh-CCCceee
Q 024296 240 FLPQR--IGHACCF-EEEEWRKLKS-SKIPVRI 268 (269)
Q Consensus 240 l~a~R--IGHG~~~-~~~l~~~l~~-~~I~lEi 268 (269)
+.--| +.||-.- .++.++++.+ .++-+.+
T Consensus 181 ~P~l~ivl~H~G~~~~~~~~~l~~~~~nvy~~~ 213 (291)
T 3irs_A 181 FPDLTVVSSHGNWPWVQEIIHVAFRRPNLYLSP 213 (291)
T ss_dssp CTTCCEEEEGGGTTCHHHHHHHHHHCTTEEEEC
T ss_pred CCCCEEEeecCCcccHHHHHHHHhHCCCeEecH
Confidence 42234 3787532 2455555533 3555443
No 65
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=82.60 E-value=13 Score=32.79 Aligned_cols=129 Identities=9% Similarity=0.055 Sum_probs=82.3
Q ss_pred cCCeEEEEecCCCC-c--ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceEEEEE
Q 024296 88 ENIVYLELRTTPKR-N--ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLL 164 (269)
Q Consensus 88 dnV~Y~Elr~~p~~-~--~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~ 164 (269)
-|+..+-+..+-.. + ...+.|.++.++.+.+.++.+++ .++.+.+-.
T Consensus 93 ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~------------------------------~g~~v~f~~ 142 (325)
T 3eeg_A 93 AKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKK------------------------------VVHEVEFFC 142 (325)
T ss_dssp CSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHT------------------------------TSSEEEEEE
T ss_pred cCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHH------------------------------CCCEEEEEc
Confidence 37665555433211 1 23356778888888888876543 344543321
Q ss_pred EEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc-C----CceeeecCCCCC--hhHHHHH
Q 024296 165 SIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-G----LQITLHCGEIPN--KEEIQSM 237 (269)
Q Consensus 165 ~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-g----l~~t~HAGE~~~--~e~i~~a 237 (269)
-..-..+++.+.++++.+.+...+.|.=-|.+|- ..|.....+++..++. + +++.+|+--+.+ ..|...|
T Consensus 143 ~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA 219 (325)
T 3eeg_A 143 EDAGRADQAFLARMVEAVIEAGADVVNIPDTTGY---MLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAA 219 (325)
T ss_dssp ETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSC---CCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHhcCCCEEEecCccCC---cCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHH
Confidence 1111246788888888887776555555566664 4577888888888774 3 899999988876 3678899
Q ss_pred HhcCCCcccccc
Q 024296 238 LDFLPQRIGHAC 249 (269)
Q Consensus 238 i~l~a~RIGHG~ 249 (269)
++.|+++|.=.+
T Consensus 220 ~~aGa~~vd~tv 231 (325)
T 3eeg_A 220 LQNGARQVECTI 231 (325)
T ss_dssp HHHTCCEEEEBG
T ss_pred HHhCCCEEEEec
Confidence 999999985433
No 66
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=82.05 E-value=16 Score=30.34 Aligned_cols=104 Identities=13% Similarity=0.131 Sum_probs=60.3
Q ss_pred CceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecC-CCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHH
Q 024296 157 KIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLS-GNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQ 235 (269)
Q Consensus 157 ~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~-G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~ 235 (269)
++.+|+|+-.. .++.++..+..+.+.+..-+.| ... |.+.++...+....++.+-...+|+..=-|= .+++...
T Consensus 117 pv~vKvi~e~~-~l~~~~~~~~a~~a~eaGad~I---~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI-~t~~da~ 191 (225)
T 1mzh_A 117 SAVHKVIVETP-YLNEEEIKKAVEICIEAGADFI---KTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGI-RDLETAI 191 (225)
T ss_dssp TSEEEEECCGG-GCCHHHHHHHHHHHHHHTCSEE---ECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSC-CSHHHHH
T ss_pred CceEEEEEeCC-CCCHHHHHHHHHHHHHhCCCEE---EECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCC-CCHHHHH
Confidence 56777764321 2456666667777766543433 322 3332222223333333332235887765444 5688888
Q ss_pred HHHhcCCCcccccccCCHHHHHHHHhCCCcee
Q 024296 236 SMLDFLPQRIGHACCFEEEEWRKLKSSKIPVR 267 (269)
Q Consensus 236 ~ai~l~a~RIGHG~~~~~~l~~~l~~~~I~lE 267 (269)
++++.|++|||=+ .-..+++-+.+++|.||
T Consensus 192 ~~l~aGA~~iG~s--~~~~i~~~~~~~~~~~~ 221 (225)
T 1mzh_A 192 SMIEAGADRIGTS--SGISIAEEFLKRHLILE 221 (225)
T ss_dssp HHHHTTCSEEEES--CHHHHHHHHHHHHHHSC
T ss_pred HHHHhCchHHHHc--cHHHHHHHHHhcccchh
Confidence 9999999998544 34567777777777665
No 67
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=81.36 E-value=6.2 Score=35.59 Aligned_cols=79 Identities=20% Similarity=0.223 Sum_probs=51.2
Q ss_pred CceEEEecCCCCCCCCh---hhHHHHHHHHHHcCCceeeecCCCCCh-hHHHHHHhcCC--Ccc--cc-cccCCHHHHHH
Q 024296 188 LGVVGIDLSGNPTKGEW---TTFLPALKFAREQGLQITLHCGEIPNK-EEIQSMLDFLP--QRI--GH-ACCFEEEEWRK 258 (269)
Q Consensus 188 ~~vvGidl~G~E~~~~~---~~f~~~f~~ar~~gl~~t~HAGE~~~~-e~i~~ai~l~a--~RI--GH-G~~~~~~l~~~ 258 (269)
.+++|.. +.....++ .-|..+.+.+++-|+|+++|.++.... +.+.-..+.|+ +|+ +| ....+++..+.
T Consensus 175 aG~I~~~--~~~~~~t~~E~k~frA~a~aa~etG~Pv~iHt~~~~~~~e~l~iL~eeG~~~~~vvi~H~~~~~d~~~~~~ 252 (360)
T 3tn4_A 175 AGVIKLA--SSKGRITEYEKMFFRAAARAQKETGAVIITHTQEGTMGPEQAAYLLEHGADPKKIVIGHMCDNTDPDYHRK 252 (360)
T ss_dssp CSEEEEE--CBTTBCCHHHHHHHHHHHHHHHHHCCEEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHH
T ss_pred ceEEEEE--ccCCCCCHHHHHHHHHHHHHHHHhCCcEEEEcCcccCCHHHHHHHHHcCCCCCceEEEcCCCCCCHHHHHH
Confidence 3577664 33322222 236677777888899999999886543 43333334664 564 57 45568888889
Q ss_pred HHhCCCceee
Q 024296 259 LKSSKIPVRI 268 (269)
Q Consensus 259 l~~~~I~lEi 268 (269)
+.++|.-|++
T Consensus 253 ~l~~G~yl~f 262 (360)
T 3tn4_A 253 TLAYGVYIAF 262 (360)
T ss_dssp HHTTTCEEEE
T ss_pred HHHcCCEEEE
Confidence 9999887764
No 68
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=80.73 E-value=4.2 Score=36.72 Aligned_cols=64 Identities=11% Similarity=0.080 Sum_probs=44.4
Q ss_pred hhHHHHHHHHHHcCCceeeec-CCCCChhHHHHHHh-cCC--Ccc--ccccc-C-CHHHHHHHHhCCCceee
Q 024296 205 TTFLPALKFAREQGLQITLHC-GEIPNKEEIQSMLD-FLP--QRI--GHACC-F-EEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HA-GE~~~~e~i~~ai~-l~a--~RI--GHG~~-~-~~~l~~~l~~~~I~lEi 268 (269)
..|....+.|++.|+|+.+|. |-......+.+.+. .++ .|+ +|... - +.+..+.+.++|.-|.+
T Consensus 190 ~~f~aq~~~A~~~glPV~iH~~gr~~a~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f 261 (364)
T 3k2g_A 190 KSLRGAARAQVRTGLPLMVHLPGWFRLAHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQRGAFLEF 261 (364)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCTTSCCHHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHCCeEEEecCCCCccHHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhCCcEEEe
Confidence 347778888888899999997 44223455666664 454 464 59884 4 77777777888877665
No 69
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=80.51 E-value=4.5 Score=36.02 Aligned_cols=64 Identities=14% Similarity=0.047 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCC--Cc--ccccc-cCCHHHHHHHHhCCCceee
Q 024296 205 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLP--QR--IGHAC-CFEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a--~R--IGHG~-~~~~~l~~~l~~~~I~lEi 268 (269)
..|....+.|++.|+|+.+|.++........+.+. .++ .| |+|.. .-+.+..+.+.+.|.-|.+
T Consensus 168 ~~f~aq~~~A~~~glPViiH~r~g~~a~~~l~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~~G~~i~~ 237 (330)
T 3pnz_A 168 KTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSF 237 (330)
T ss_dssp HHHHHHHHHHHHHCCCEEEECGGGCCHHHHHHHHHHTTCCGGGEEETTGGGSCCHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHCCeEEEeCCCCcChHHHHHHHHHcCCCCCeEEEecCCCCCCHHHHHHHHHcCcEEEE
Confidence 34888888889999999999987333333455554 454 46 44664 3466777778888877665
No 70
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=80.48 E-value=4.2 Score=35.37 Aligned_cols=62 Identities=18% Similarity=0.224 Sum_probs=45.2
Q ss_pred hhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCC---CcccccccCCHHHHHHHHhCCCceee
Q 024296 205 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLP---QRIGHACCFEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a---~RIGHG~~~~~~l~~~l~~~~I~lEi 268 (269)
+.|...++.|++.|+|+.+|+.+. .+.+.+.+. .+. .=|-|++.-+.+.++.+.+.|.-+-+
T Consensus 114 ~~F~~ql~lA~e~~lPv~iH~r~a--~~~~l~il~~~~~~~~~~V~H~fsG~~e~a~~~l~~G~yis~ 179 (287)
T 3rcm_A 114 KALEAQLTLAAQLRLPVFLHERDA--SERLLAILKDYRDHLTGAVVHCFTGEREALFAYLDLDLHIGI 179 (287)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESC--HHHHHHHHHTTGGGCSCEEECSCCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCc--HHHHHHHHHHcCCCCCeEEEEeCCCCHHHHHHHHHCCcEEEE
Confidence 348888999999999999999873 455667665 433 23668776677777777778876654
No 71
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=80.25 E-value=2.6 Score=35.91 Aligned_cols=64 Identities=22% Similarity=0.329 Sum_probs=48.9
Q ss_pred HHHHHHHHhhCCCceE-------------EEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCC
Q 024296 176 METVKLALEMRDLGVV-------------GIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLP 242 (269)
Q Consensus 176 ~~~~~~a~~~~~~~vv-------------Gidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a 242 (269)
.++++.|.+.+|..++ |+|+.|+. ....++.+..++.|+++++-.. .+++.|..|.+.|+
T Consensus 77 ~emi~ia~~~kP~~vtLVPE~r~e~TTegGldv~~~~-----~~l~~~i~~L~~~GIrVSLFID--pd~~qi~aA~~~GA 149 (243)
T 1m5w_A 77 EEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQR-----DKMRDACKRLADAGIQVSLFID--ADEEQIKAAAEVGA 149 (243)
T ss_dssp HHHHHHHHHHCCSEEEECCCCSSCSSCCSCCCSGGGH-----HHHHHHHHHHHHTTCEEEEEEC--SCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCcCCCcchhHHhhH-----HHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHhCc
Confidence 3688899998887554 44554432 4567888999999999999873 35688889999999
Q ss_pred Cccc
Q 024296 243 QRIG 246 (269)
Q Consensus 243 ~RIG 246 (269)
+||.
T Consensus 150 ~~IE 153 (243)
T 1m5w_A 150 PFIE 153 (243)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 9985
No 72
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=80.22 E-value=3.2 Score=36.02 Aligned_cols=65 Identities=22% Similarity=0.332 Sum_probs=49.2
Q ss_pred HHHHHHHHhhCCCceE-------------EEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCC
Q 024296 176 METVKLALEMRDLGVV-------------GIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLP 242 (269)
Q Consensus 176 ~~~~~~a~~~~~~~vv-------------Gidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a 242 (269)
.+.++.|.+.+|+.|+ |+|+.|+. ....++.+..++.|+++++-.. .+++.|..|.+.|+
T Consensus 105 ~emi~ial~~kP~~vtLVPEkreE~TTegGlDv~~~~-----~~L~~~i~~L~~~GIrVSLFID--pd~~qI~aA~~~GA 177 (278)
T 3gk0_A 105 PEMLDIACEIRPHDACLVPEKRSELTTEGGLDVVGHF-----DAVRAACKQLADAGVRVSLFID--PDEAQIRAAHETGA 177 (278)
T ss_dssp HHHHHHHHHHCCSEEEECCCSGGGBCSSSSBCTTTTH-----HHHHHHHHHHHHTTCEEEEEEC--SCHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCcCCCcchhhhccH-----HHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHhCc
Confidence 5788899998887544 45554433 4577788999999999998872 35678888888999
Q ss_pred Ccccc
Q 024296 243 QRIGH 247 (269)
Q Consensus 243 ~RIGH 247 (269)
+||.=
T Consensus 178 d~IEL 182 (278)
T 3gk0_A 178 PVIEL 182 (278)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99864
No 73
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=79.80 E-value=43 Score=31.85 Aligned_cols=90 Identities=13% Similarity=0.091 Sum_probs=65.3
Q ss_pred CceEEEEEEEeC--CCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCC-
Q 024296 157 KIYVRLLLSIDR--RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPN- 230 (269)
Q Consensus 157 ~i~~rli~~~~R--~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~- 230 (269)
|..++..+|..- ..+++.+.++++.+.+...+.|.=-|.+|-= .|.....+++..++. ++++-+|+--+.|
T Consensus 157 G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~---~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~Gl 233 (539)
T 1rqb_A 157 GKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAALL---KPQPAYDIIKAIKDTYGQKTQINLHCHSTTGV 233 (539)
T ss_dssp TCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCC---CHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSC
T ss_pred CCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCc---CHHHHHHHHHHHHHhcCCCceEEEEeCCCCCh
Confidence 556665554432 2468888888888888766667777888753 467777777777663 6999999988776
Q ss_pred -hhHHHHHHhcCCCcccccc
Q 024296 231 -KEEIQSMLDFLPQRIGHAC 249 (269)
Q Consensus 231 -~e~i~~ai~l~a~RIGHG~ 249 (269)
.-|...|++.|+++|.=.+
T Consensus 234 AvAN~laAveAGa~~VD~ti 253 (539)
T 1rqb_A 234 TEVSLMKAIEAGVDVVDTAI 253 (539)
T ss_dssp HHHHHHHHHHTTCSEEEEBC
T ss_pred HHHHHHHHHHhCCCEEEEec
Confidence 3678889999999986444
No 74
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=79.54 E-value=3.8 Score=36.30 Aligned_cols=87 Identities=21% Similarity=0.210 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCC---ChhhHHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcCCCcc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKG---EWTTFLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFLPQRI 245 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~---~~~~f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~a~RI 245 (269)
.++++..+.++.+.+ .++..|-+.|.|... +...+.++++.+++. |+.+++..|.. +.+.+....+.|.+|+
T Consensus 91 ls~eei~~~~~~~~~---~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~i~~s~g~~-~~e~l~~L~~aG~~~i 166 (350)
T 3t7v_A 91 LTMEEIKETCKTLKG---AGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIMISPGLM-DNATLLKAREKGANFL 166 (350)
T ss_dssp CCHHHHHHHHHHHTT---SCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSCEEEECSSC-CHHHHHHHHHTTEEEE
T ss_pred CCHHHHHHHHHHHHH---CCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCceEEEeCCCC-CHHHHHHHHHcCCCEE
Confidence 467777666665443 345555556655321 345678888888764 89998888873 5666666666899999
Q ss_pred cccccC-CHHHHHHHH
Q 024296 246 GHACCF-EEEEWRKLK 260 (269)
Q Consensus 246 GHG~~~-~~~l~~~l~ 260 (269)
.+|+.. ++++.+.+.
T Consensus 167 ~i~lEt~~~~~~~~i~ 182 (350)
T 3t7v_A 167 ALYQETYDTELYRKLR 182 (350)
T ss_dssp ECCCBCSCHHHHHHHS
T ss_pred EEeeecCCHHHHHHhC
Confidence 999865 566555443
No 75
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=78.33 E-value=29 Score=30.74 Aligned_cols=161 Identities=16% Similarity=0.077 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHHHHH---HHhcCCeEEEEecC----------CCCcc---cCCCCHHHHHHHHHHHHHhhhhcccccccc
Q 024296 70 DHATVTRITQEVVED---FASENIVYLELRTT----------PKRNE---SIGMSKRSYMDAVVEGLRAVSAVDVDFASR 133 (269)
Q Consensus 70 ~~~~~~~~~~~~~~~---~~~dnV~Y~Elr~~----------p~~~~---~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~ 133 (269)
|.+++.+++.++.+. +.+-|.--+||-.+ |..+. .-|-+.+.-.+-+.+.++..++
T Consensus 135 t~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~-------- 206 (340)
T 3gr7_A 135 TKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVRE-------- 206 (340)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHH--------
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHH--------
Confidence 456777777776653 34569999999865 64321 2244666555555555554433
Q ss_pred ccccccccccccccccccCCCCCCceEEEEEEE--eCCCCHHHHHHHHHHHHhhCCCceEEEecC-CC-CC-C--CChhh
Q 024296 134 SIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSI--DRRETTEAAMETVKLALEMRDLGVVGIDLS-GN-PT-K--GEWTT 206 (269)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~~--~R~~~~~~~~~~~~~a~~~~~~~vvGidl~-G~-E~-~--~~~~~ 206 (269)
.-+..+.+|+=..- .-..+.+...+.++...+ .++-.|++. |. .. . ..+..
T Consensus 207 -------------------~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~---~Gvd~i~vs~g~~~~~~~~~~~~~ 264 (340)
T 3gr7_A 207 -------------------VWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKE---QGVDLVDVSSGAIVPARMNVYPGY 264 (340)
T ss_dssp -------------------HCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHH---TTCCEEEEECCCSSCCCCCCCTTT
T ss_pred -------------------hcCCceEEEeccccccCCCCCHHHHHHHHHHHHH---cCCCEEEEecCCccCCCCCCCccc
Confidence 11345666653220 012334444444444433 346666665 22 11 1 11222
Q ss_pred HHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcC-CCccccccc--CCHHHHHHHHh
Q 024296 207 FLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFL-PQRIGHACC--FEEEEWRKLKS 261 (269)
Q Consensus 207 f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~-a~RIGHG~~--~~~~l~~~l~~ 261 (269)
+.+..+..++. ++++.. .|-..+++...++++-| +|-|+=|-. .+|++.+.+++
T Consensus 265 ~~~~~~~ik~~~~iPVi~-~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~ 322 (340)
T 3gr7_A 265 QVPFAELIRREADIPTGA-VGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAAR 322 (340)
T ss_dssp THHHHHHHHHHTTCCEEE-ESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred cHHHHHHHHHHcCCcEEe-eCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHH
Confidence 44555555554 787644 56656788889999877 999888754 38988877765
No 76
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=77.21 E-value=6.9 Score=35.27 Aligned_cols=65 Identities=12% Similarity=0.049 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHHc-CCceeeec-CCCCChhHHHHHHh-c-CC--Ccc--ccccc--CCHHHHHHHHhCCCceeeC
Q 024296 205 TTFLPALKFAREQ-GLQITLHC-GEIPNKEEIQSMLD-F-LP--QRI--GHACC--FEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 205 ~~f~~~f~~ar~~-gl~~t~HA-GE~~~~e~i~~ai~-l-~a--~RI--GHG~~--~~~~l~~~l~~~~I~lEic 269 (269)
..|....+.|++. |+|+++|. +-......+.+.+. . ++ .|+ +|... -+.+....+++.|.-|+++
T Consensus 179 ~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~ 253 (365)
T 3rhg_A 179 NSLRAAALAQNNNPYASMNIHMPGWQRRGDEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLDRGVWLEFD 253 (365)
T ss_dssp HHHHHHHHHHTTCTTCEEEEECCTTSCCHHHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHhcCCcEEEECCCCCcCHHHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHhCCCEEEec
Confidence 3477788888899 99999997 73223455555554 4 54 354 79884 4677777888888877653
No 77
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=76.44 E-value=3.3 Score=37.07 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=28.0
Q ss_pred ceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCC
Q 024296 189 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEI 228 (269)
Q Consensus 189 ~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~ 228 (269)
++++|...+. ...+.+.+..+++.|++.|+++.+|+.+.
T Consensus 140 g~~~i~~~~~-~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 178 (426)
T 2z00_A 140 GAVLLTDDGR-TNEDAGVLAAGLLMAAPLGLPVAVHAEDA 178 (426)
T ss_dssp TCCEEECTTS-CCCCHHHHHHHHHHHGGGTCCEEECCCCH
T ss_pred CCEEEECCCc-CCCCHHHHHHHHHHHHhhCCEEEEeCCCH
Confidence 4566653221 12345778899999999999999999774
No 78
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=76.29 E-value=42 Score=29.90 Aligned_cols=165 Identities=15% Similarity=0.118 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHHH---HHhcCCeEEEEec----------CCCCc---ccCCCCHHHHHHHHHHHHHhhhhcccccccc
Q 024296 70 DHATVTRITQEVVED---FASENIVYLELRT----------TPKRN---ESIGMSKRSYMDAVVEGLRAVSAVDVDFASR 133 (269)
Q Consensus 70 ~~~~~~~~~~~~~~~---~~~dnV~Y~Elr~----------~p~~~---~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~ 133 (269)
|.+++.+++.++.+. +.+-|.--+||.. +|..+ ..-|-+.+.-.+-+.+.++..++.
T Consensus 149 t~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~a------- 221 (363)
T 3l5l_A 149 TLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREV------- 221 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTT-------
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHH-------
Confidence 456777777776653 4467999999985 45432 122446666555555555544330
Q ss_pred ccccccccccccccccccCCCCCCceEEEEEEEeCCCCH-HHHHHHHHHHHhhCCCceEEEecCCC---CC-C--CChhh
Q 024296 134 SIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETT-EAAMETVKLALEMRDLGVVGIDLSGN---PT-K--GEWTT 206 (269)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~~~R~~~~-~~~~~~~~~a~~~~~~~vvGidl~G~---E~-~--~~~~~ 206 (269)
--.++.+.+|+=.. .....- ....+.+.++......++-.|++.+. +. . ..+..
T Consensus 222 ------------------vg~d~pV~vRis~~-~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~ 282 (363)
T 3l5l_A 222 ------------------WPENLPLTARFGVL-EYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAF 282 (363)
T ss_dssp ------------------SCTTSCEEEEEEEE-CSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTT
T ss_pred ------------------cCCCceEEEEecch-hcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcch
Confidence 11244566775442 111111 22233444444443335666666531 11 1 11223
Q ss_pred HHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcC-CCccccccc--CCHHHHHHHHh
Q 024296 207 FLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFL-PQRIGHACC--FEEEEWRKLKS 261 (269)
Q Consensus 207 f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~-a~RIGHG~~--~~~~l~~~l~~ 261 (269)
+.+..+..|+. ++++.. .|-..+++...++++-| +|-|+=|-. .+|++.+.+++
T Consensus 283 ~~~~~~~ir~~~~iPVi~-~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~ 340 (363)
T 3l5l_A 283 MGPIAERVRREAKLPVTS-AWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAK 340 (363)
T ss_dssp THHHHHHHHHHHTCCEEE-CSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHH
T ss_pred hHHHHHHHHHHcCCcEEE-eCCCCCHHHHHHHHHCCCccEEEecHHHHhCchHHHHHHH
Confidence 44555555554 777654 45556788888999876 998877754 38887766654
No 79
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=75.28 E-value=3.6 Score=35.34 Aligned_cols=78 Identities=12% Similarity=0.072 Sum_probs=50.8
Q ss_pred CceEEEecCCCCCCCC--hhhHHHHHHHHHHcCCceeeecCCCC---ChhHHHHHHh-cCCC--c--ccccccCCHHHHH
Q 024296 188 LGVVGIDLSGNPTKGE--WTTFLPALKFAREQGLQITLHCGEIP---NKEEIQSMLD-FLPQ--R--IGHACCFEEEEWR 257 (269)
Q Consensus 188 ~~vvGidl~G~E~~~~--~~~f~~~f~~ar~~gl~~t~HAGE~~---~~e~i~~ai~-l~a~--R--IGHG~~~~~~l~~ 257 (269)
+.+|||+=.|-..... ..-|...++.|++.|+|+.+|.+... ..+.+.+.+. .+.. + |.|. +.+.++
T Consensus 91 ~~vvaIGEiGLD~~~~~Q~~~f~~ql~lA~e~~lPv~iH~r~~~~~~a~~~~~~il~~~~~~~~~~vi~H~---~~~~a~ 167 (261)
T 3guw_A 91 GEWVAFGEIGLELVTDEEIEVLKSQLELAKRMDVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDHV---NFETLD 167 (261)
T ss_dssp SCCSCEEEEECSSCCHHHHHHHHHHHHHHHHHTCCEEEECCSSSTTHHHHHHHHHHHHTTCCTTSEEEESC---CTTTHH
T ss_pred CCeEEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEEEcCCCcccchHHHHHHHHHHcCCCCCCEEEEeC---CHHHHH
Confidence 4576666555443222 13488889999999999999998743 2356677765 5543 3 3476 566667
Q ss_pred HHHhCCCceee
Q 024296 258 KLKSSKIPVRI 268 (269)
Q Consensus 258 ~l~~~~I~lEi 268 (269)
.+.+.|.-+.+
T Consensus 168 ~~l~~G~yis~ 178 (261)
T 3guw_A 168 MVLETEYWIGL 178 (261)
T ss_dssp HHHTSSSEEEE
T ss_pred HHHhCCEEEEe
Confidence 77777766543
No 80
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=74.62 E-value=9 Score=34.11 Aligned_cols=64 Identities=22% Similarity=0.266 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCC--Ccc--ccccc-CCHHHHHHHHhCCCceee
Q 024296 205 TTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLP--QRI--GHACC-FEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a--~RI--GHG~~-~~~~l~~~l~~~~I~lEi 268 (269)
..|....+.|++.|+|+.+|.|.......+.+.+. .+. .|+ +|... -+.+..+.+.+.|.-|.+
T Consensus 173 ~~f~aq~~lA~~~glPViiH~~~gr~a~~~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~~G~~i~~ 242 (339)
T 3gtx_A 173 LFFRAAARVQRETGVPIITHTQEGQQGPQQAELLTSLGADPARIMIGHMDGNTDPAYHRETLRHGVSIAF 242 (339)
T ss_dssp HHHHHHHHHHHHHCCCEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHCCeEEEeCCCCcCHHHHHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHHcCcEEEE
Confidence 34788888899999999999976433334566665 454 463 68874 567777778888877665
No 81
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=73.66 E-value=31 Score=28.73 Aligned_cols=82 Identities=16% Similarity=0.009 Sum_probs=54.6
Q ss_pred HHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCccc---cccc----
Q 024296 178 TVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIG---HACC---- 250 (269)
Q Consensus 178 ~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIG---HG~~---- 250 (269)
.++.+.+..-+ ++-+|.+... +|....++++.+++.|+.+.+ +..+.+....+.+.|++-|| ||+.
T Consensus 93 ~i~~~~~aGad-~I~l~~~~~~---~p~~l~~~i~~~~~~g~~v~~---~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~ 165 (229)
T 3q58_A 93 DVDALAQAGAD-IIAFDASFRS---RPVDIDSLLTRIRLHGLLAMA---DCSTVNEGISCHQKGIEFIGTTLSGYTGPIT 165 (229)
T ss_dssp HHHHHHHHTCS-EEEEECCSSC---CSSCHHHHHHHHHHTTCEEEE---ECSSHHHHHHHHHTTCSEEECTTTTSSSSCC
T ss_pred HHHHHHHcCCC-EEEECccccC---ChHHHHHHHHHHHHCCCEEEE---ecCCHHHHHHHHhCCCCEEEecCccCCCCCc
Confidence 34444454444 6677766422 224567778888888988765 45678888888899999996 6642
Q ss_pred C---CHHHHHHHHhCCCce
Q 024296 251 F---EEEEWRKLKSSKIPV 266 (269)
Q Consensus 251 ~---~~~l~~~l~~~~I~l 266 (269)
. +-++++.+++.++|+
T Consensus 166 ~~~~~~~li~~l~~~~ipv 184 (229)
T 3q58_A 166 PVEPDLAMVTQLSHAGCRV 184 (229)
T ss_dssp CSSCCHHHHHHHHTTTCCE
T ss_pred CCCCCHHHHHHHHHcCCCE
Confidence 1 236777887767765
No 82
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=71.41 E-value=38 Score=28.20 Aligned_cols=82 Identities=10% Similarity=0.032 Sum_probs=54.1
Q ss_pred HHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCccc---cccc----
Q 024296 178 TVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIG---HACC---- 250 (269)
Q Consensus 178 ~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIG---HG~~---- 250 (269)
.++.+.+..-+ ++-+|.+.... |....++++.+++.|+.+.. +..+.+....+.+.|++-|| ||+.
T Consensus 93 ~i~~~~~~Gad-~V~l~~~~~~~---p~~l~~~i~~~~~~g~~v~~---~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~ 165 (232)
T 3igs_A 93 DVDALAQAGAA-IIAVDGTARQR---PVAVEALLARIHHHHLLTMA---DCSSVDDGLACQRLGADIIGTTMSGYTTPDT 165 (232)
T ss_dssp HHHHHHHHTCS-EEEEECCSSCC---SSCHHHHHHHHHHTTCEEEE---ECCSHHHHHHHHHTTCSEEECTTTTSSSSSC
T ss_pred HHHHHHHcCCC-EEEECccccCC---HHHHHHHHHHHHHCCCEEEE---eCCCHHHHHHHHhCCCCEEEEcCccCCCCCC
Confidence 34444454444 66676654222 24567778888888988765 45677888888889999996 5542
Q ss_pred ---CCHHHHHHHHhCCCce
Q 024296 251 ---FEEEEWRKLKSSKIPV 266 (269)
Q Consensus 251 ---~~~~l~~~l~~~~I~l 266 (269)
.+.++++.+++.+||+
T Consensus 166 ~~~~~~~~i~~l~~~~ipv 184 (232)
T 3igs_A 166 PEEPDLPLVKALHDAGCRV 184 (232)
T ss_dssp CSSCCHHHHHHHHHTTCCE
T ss_pred CCCCCHHHHHHHHhcCCcE
Confidence 1346777787767765
No 83
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=70.56 E-value=54 Score=28.57 Aligned_cols=52 Identities=10% Similarity=0.018 Sum_probs=36.4
Q ss_pred HHHHHHHHc---CCceeeecCCCCChhHHHHHHhcCCCccccccc--C-CHHHHHHHHh
Q 024296 209 PALKFAREQ---GLQITLHCGEIPNKEEIQSMLDFLPQRIGHACC--F-EEEEWRKLKS 261 (269)
Q Consensus 209 ~~f~~ar~~---gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~--~-~~~l~~~l~~ 261 (269)
......++. ++++.. .|=..+++.+.+++..||+-++=|.. . +|++.+.+++
T Consensus 277 ~~i~~i~~~~~~~ipVi~-~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~~~i~~ 334 (336)
T 1f76_A 277 EIIRRLSLELNGRLPIIG-VGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT 334 (336)
T ss_dssp HHHHHHHHHHTTSSCEEE-ESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEE-ECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHHHHHHh
Confidence 344444442 688754 56667889999999999999966654 3 7888777654
No 84
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=70.17 E-value=6.2 Score=32.22 Aligned_cols=82 Identities=16% Similarity=0.154 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeec-CCCC--ChhHHHHHHhcCCCcccc
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHC-GEIP--NKEEIQSMLDFLPQRIGH 247 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HA-GE~~--~~e~i~~ai~l~a~RIGH 247 (269)
+++...+.++.........+.+|.+.|.|.--.+....++++.+++.|+++++.. | .. .++.+.+.+.. .++|.-
T Consensus 51 ~~~~i~~~i~~~~~~~~~~~~~i~~~GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng-~~~~~~~~~~~l~~~-~~~v~i 128 (245)
T 3c8f_A 51 TVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNG-FVRRYDPVIDELLEV-TDLVML 128 (245)
T ss_dssp CHHHHHHHHGGGHHHHTSTTCEEEEEESCGGGGHHHHHHHHHHHHTTTCCEEEEECC-CCCCCCHHHHHHHHT-CSEEEE
T ss_pred CHHHHHHHHHHhhhhhcCCCCeEEEECCCcCCCHHHHHHHHHHHHHcCCcEEEEeCC-CcCcCHHHHHHHHHh-CCEEEE
Confidence 4555555555443332223566777776643333224688899999999988886 5 33 45666665555 677877
Q ss_pred cccC-CHH
Q 024296 248 ACCF-EEE 254 (269)
Q Consensus 248 G~~~-~~~ 254 (269)
++.. +++
T Consensus 129 sld~~~~~ 136 (245)
T 3c8f_A 129 DLKQMNDE 136 (245)
T ss_dssp ECCCSSHH
T ss_pred eCCCCCHH
Confidence 7754 444
No 85
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=70.03 E-value=88 Score=30.80 Aligned_cols=91 Identities=9% Similarity=0.005 Sum_probs=67.2
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc--CCceeeecCCCCC--hhHHHHHHhcCCCccc
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ--GLQITLHCGEIPN--KEEIQSMLDFLPQRIG 246 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~--gl~~t~HAGE~~~--~e~i~~ai~l~a~RIG 246 (269)
+++...++++.+.+...+.|.=-|.+|-= .|.....+++.+++. ++++-+|+--+.| .-|...|++.|+++|.
T Consensus 259 ~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~---~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD 335 (718)
T 3bg3_A 259 SLQYYMGLAEELVRAGTHILCIKDMAGLL---KPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVD 335 (718)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTSCC---CHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCcCCCc---CHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEE
Confidence 67888888888888766667777888743 467777888877764 7999999988876 3678889999999987
Q ss_pred cccc-----C-C---HHHHHHHHhCCC
Q 024296 247 HACC-----F-E---EEEWRKLKSSKI 264 (269)
Q Consensus 247 HG~~-----~-~---~~l~~~l~~~~I 264 (269)
=.+. . + ++++..|...++
T Consensus 336 ~ti~GlGertGN~~lE~vv~~L~~~g~ 362 (718)
T 3bg3_A 336 VAADSMSGMTSQPSMGALVACTRGTPL 362 (718)
T ss_dssp EBCGGGCSTTSCCBHHHHHHHHTTSTT
T ss_pred ecCcccccccCchhHHHHHHHHHhcCC
Confidence 5443 1 2 456666666544
No 86
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=66.98 E-value=9.5 Score=33.28 Aligned_cols=57 Identities=18% Similarity=0.130 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCC--ChhhHHHHHHHHHHcCCceeeecCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKG--EWTTFLPALKFAREQGLQITLHCGEI 228 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~--~~~~f~~~f~~ar~~gl~~t~HAGE~ 228 (269)
.+++.+.+-++.+.+ ..+++|+-+...-.+. .-..|.++|+.|.+.|+++.+|.|..
T Consensus 107 ~~~~~a~~el~r~~~--~~G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~pv~iH~g~~ 165 (312)
T 3ij6_A 107 NNIESACKVISSIKD--DENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPLWMHPVFD 165 (312)
T ss_dssp TCHHHHHHHHHHHHH--CTTEEEEEEESEETTEETTSTTTHHHHHHHHHTTCCEEEECCCC
T ss_pred cCHHHHHHHHHHHHH--hCCCceEeccCCCCCCCCCCccHHHHHHHHHHcCCeEEEcCCCC
Confidence 356666666666643 2368888775332221 22569999999999999999999864
No 87
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=66.50 E-value=9.7 Score=32.14 Aligned_cols=60 Identities=23% Similarity=0.243 Sum_probs=41.2
Q ss_pred ceEEEecCCCCCC-C--ChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCCCcc--ccccc
Q 024296 189 GVVGIDLSGNPTK-G--EWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQRI--GHACC 250 (269)
Q Consensus 189 ~vvGidl~G~E~~-~--~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a~RI--GHG~~ 250 (269)
+++||-+..+-.. . .-+.|.++|+.|.+.|+++.+|.|.. ....+...+. +. -|+ .|+-.
T Consensus 105 g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~-~~~~~~~~~~~~p-l~~vi~H~g~ 170 (288)
T 2ffi_A 105 GVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQVA-DIPVLVRALQPYG-LDIVIDHFGR 170 (288)
T ss_dssp TCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSCTT-THHHHHHHHTTTT-CCEEESGGGS
T ss_pred CCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEeechh-hHHHHHHHHHHCC-CCEEEECCCC
Confidence 6899977533221 1 12569999999999999999999874 3455666665 45 553 58754
No 88
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=66.09 E-value=15 Score=31.36 Aligned_cols=61 Identities=20% Similarity=0.163 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHcCCcee-eecCCCCChhHHHHHHh-cCCC--cccccccCCHHHHHHHHhCCCceee
Q 024296 206 TFLPALKFAREQGLQIT-LHCGEIPNKEEIQSMLD-FLPQ--RIGHACCFEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 206 ~f~~~f~~ar~~gl~~t-~HAGE~~~~e~i~~ai~-l~a~--RIGHG~~~~~~l~~~l~~~~I~lEi 268 (269)
-|...++.|++.|+|+. +|+.+. .+.+.+.+. .+.. -|=|++.-+.+.++.+.+.|.-+-+
T Consensus 105 ~F~~ql~lA~e~~lPviSiH~r~a--~~~~~~il~~~~~~~~~v~H~fsG~~e~a~~~l~~G~yis~ 169 (254)
T 3gg7_A 105 VFQHILRRCEDHGGRILSIHSRRA--ESEVLNCLEANPRSGTPILHWYSGSVTELRRAISLGCWFSV 169 (254)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTC--HHHHHHHHHHCGGGEEEEEETCCSCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEcCCc--HHHHHHHHHHcCCCCcEEEEeCCCCHHHHHHHHcCCcEEEE
Confidence 38888889999999997 999863 455666665 4322 2668777677777777777766544
No 89
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=65.99 E-value=66 Score=27.89 Aligned_cols=57 Identities=16% Similarity=0.278 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHhhCCCceEEEecCCCCCC-------CChhhHHHHHHHHHHcCCceeeecCCCCC
Q 024296 172 TEAAMETVKLALEMRDLGVVGIDLSGNPTK-------GEWTTFLPALKFAREQGLQITLHCGEIPN 230 (269)
Q Consensus 172 ~~~~~~~~~~a~~~~~~~vvGidl~G~E~~-------~~~~~f~~~f~~ar~~gl~~t~HAGE~~~ 230 (269)
++.+.+.++.+.+ ..+++||-+..+..+ ..-+.|.++|+.|.+.|+++.+|.|...+
T Consensus 121 ~~~a~~eL~r~~~--~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~~~~~ 184 (350)
T 2gwg_A 121 PKTCIPELEKCVK--EYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVSTSCN 184 (350)
T ss_dssp GGGGHHHHHHHHH--TSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCCC---
T ss_pred HHHHHHHHHHHHh--ccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCCCCCc
Confidence 3445555565553 236888866322111 12256999999999999999999997643
No 90
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=65.61 E-value=15 Score=31.61 Aligned_cols=63 Identities=21% Similarity=0.308 Sum_probs=48.1
Q ss_pred HHHHHHHHhhCCCceE-------------EEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCC
Q 024296 176 METVKLALEMRDLGVV-------------GIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLP 242 (269)
Q Consensus 176 ~~~~~~a~~~~~~~vv-------------Gidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a 242 (269)
.++++.|.+.+|..|+ |+|+ ......++.+..++.|+++++-.. .+++.|..|.+.|+
T Consensus 76 ~emi~ial~~kP~~vtLVPEkreE~TTegGldv-------~~~~L~~~i~~L~~~GIrVSLFID--pd~~qi~aA~~~GA 146 (260)
T 3o6c_A 76 DEILNLALKLKPHRVTLVPEKREELTTEGGLCL-------NHAKLKQSIEKLQNANIEVSLFIN--PSLEDIEKSKILKA 146 (260)
T ss_dssp HHHHHHHHHHCCSEEEECCCSGGGBCTTSSBCT-------TCTTHHHHHHHHHHTTCEEEEEEC--SCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCccCCCCChhh-------CHHHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHhCC
Confidence 4688889998886544 4454 224577888999999999999882 35678999999999
Q ss_pred Ccccc
Q 024296 243 QRIGH 247 (269)
Q Consensus 243 ~RIGH 247 (269)
+||.=
T Consensus 147 d~IEL 151 (260)
T 3o6c_A 147 QFIEL 151 (260)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99853
No 91
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=65.08 E-value=56 Score=26.76 Aligned_cols=125 Identities=13% Similarity=0.076 Sum_probs=74.8
Q ss_pred HHHHHHHHHhcCCeEEEEecCCCC---c---c-cCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccc
Q 024296 78 TQEVVEDFASENIVYLELRTTPKR---N---E-SIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDAC 150 (269)
Q Consensus 78 ~~~~~~~~~~dnV~Y~Elr~~p~~---~---~-~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (269)
+.+.++.+++-|..++|++..+.. + . ...++.+ .++.+.+.+++
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~---------------------------- 74 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQ-TQKEIKELAAS---------------------------- 74 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHH-HHHHHHHHHHH----------------------------
T ss_pred HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHH-HHHHHHHHHHH----------------------------
Confidence 366788889999999999975321 0 0 1123432 24444444432
Q ss_pred cCCCCCCceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeec--CCC
Q 024296 151 NGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHC--GEI 228 (269)
Q Consensus 151 ~~~~~~~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HA--GE~ 228 (269)
.|+++-.+.+. .....+.....++.|..+..+.|+.. .| .+.+..+-..|++.|+.+.+|- ++.
T Consensus 75 -----~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~v~~~--~~------~~~~~~l~~~a~~~gv~l~~En~~~~~ 140 (262)
T 3p6l_A 75 -----KGIKIVGTGVY-VAEKSSDWEKMFKFAKAMDLEFITCE--PA------LSDWDLVEKLSKQYNIKISVHNHPQPS 140 (262)
T ss_dssp -----TTCEEEEEEEE-CCSSTTHHHHHHHHHHHTTCSEEEEC--CC------GGGHHHHHHHHHHHTCEEEEECCSSSS
T ss_pred -----cCCeEEEEecc-CCccHHHHHHHHHHHHHcCCCEEEec--CC------HHHHHHHHHHHHHhCCEEEEEeCCCcc
Confidence 36665544333 22345567788888888766545442 12 2457788888999999998885 432
Q ss_pred C--ChhHHHHHHhcCCCcc
Q 024296 229 P--NKEEIQSMLDFLPQRI 245 (269)
Q Consensus 229 ~--~~e~i~~ai~l~a~RI 245 (269)
. +++.+.+.++-+..++
T Consensus 141 ~~~~~~~~~~ll~~~~~~~ 159 (262)
T 3p6l_A 141 DYWKPENLLKAISGRSQSL 159 (262)
T ss_dssp SSSSHHHHHHHHTTSCTTE
T ss_pred ccCCHHHHHHHHHhCCCce
Confidence 2 4555666655334444
No 92
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=64.57 E-value=55 Score=31.80 Aligned_cols=137 Identities=8% Similarity=0.009 Sum_probs=84.5
Q ss_pred HHHHHHhcCCeEEEEec--CCCCc-ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCC
Q 024296 81 VVEDFASENIVYLELRT--TPKRN-ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKK 157 (269)
Q Consensus 81 ~~~~~~~dnV~Y~Elr~--~p~~~-~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (269)
.++.+..-++..+=+.. ++... ..-+.|.+++++.+.+.++.+++.. .....
T Consensus 154 a~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~-------------------------~~~~~ 208 (644)
T 3hq1_A 154 TFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQA-------------------------AKYPG 208 (644)
T ss_dssp HHHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHH-------------------------HHSCS
T ss_pred HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHh-------------------------hhccC
Confidence 33333344554444433 33221 2447899999999988887665421 11123
Q ss_pred ceEEEEEEEe---CCCCHHHHHHHHHHHHhhC---CCceEEE---ecCCCCCCCChhhHHHHHHHHHHc-----CCceee
Q 024296 158 IYVRLLLSID---RRETTEAAMETVKLALEMR---DLGVVGI---DLSGNPTKGEWTTFLPALKFAREQ-----GLQITL 223 (269)
Q Consensus 158 i~~rli~~~~---R~~~~~~~~~~~~~a~~~~---~~~vvGi---dl~G~E~~~~~~~f~~~f~~ar~~-----gl~~t~ 223 (269)
..+++.++.. | .+++.+.++++.+.+.. .+..+-| |.+|. ..|..+..+++..++. ++++.+
T Consensus 209 ~~~~v~fs~Edasr-td~dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~---~tP~~~~~li~~l~~~v~~~~~v~l~v 284 (644)
T 3hq1_A 209 TQWRFEYSPESYTG-TELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEM---TTPNVYADSIEWMSRNLANRESVILSL 284 (644)
T ss_dssp SEEEEEEEEETGGG-SCHHHHHHHHHHHHHHHCCCSSSCEEEEEEESSCC---SCHHHHHHHHHHHHHHSTTGGGEEEEE
T ss_pred ceEEEEEcCcccCC-CCHHHHHHHHHHHHHhcCCCCCceeEEEecCCCcc---cCHHHHHHHHHHHHHhcccccCceEEE
Confidence 3455555553 4 46788888888887642 2322333 44442 3467777777777654 589999
Q ss_pred ecCCCCC--hhHHHHHHhcCCCccc
Q 024296 224 HCGEIPN--KEEIQSMLDFLPQRIG 246 (269)
Q Consensus 224 HAGE~~~--~e~i~~ai~l~a~RIG 246 (269)
|+--+.| .-|...|++.|+++|.
T Consensus 285 H~HND~GlAvANslaAv~AGA~~Vd 309 (644)
T 3hq1_A 285 HPHNDRGTAVAAAELGFAAGADRIE 309 (644)
T ss_dssp EEBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred ecCCCCCcHHHHHHHHHHhCCCEEE
Confidence 9988775 3677889999999986
No 93
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=64.36 E-value=1.4e+02 Score=31.10 Aligned_cols=92 Identities=13% Similarity=0.018 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc-CCceeeecCCCCC--hhHHHHHHhcCCCccc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPN--KEEIQSMLDFLPQRIG 246 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-gl~~t~HAGE~~~--~e~i~~ai~l~a~RIG 246 (269)
.+++...++++.+.+...+.|.=-|.+|-= .|.....+++.+++. ++++-+|+--+.| .-|...|++.|+++|.
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~---~P~~~~~lv~~l~~~~~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd 782 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHIIAVKDMAGLL---KPAAAKVLFKALREATGLPIHFHTHDTSGIAAATVLAAVEAGVDAVD 782 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEEEEEETTCCC---CHHHHHHHHHHHHHHCSSCEEEEECBTTSCHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCccCCc---CHHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHhCCCEEE
Confidence 467778888888877766778888888744 366777777777664 8999999988876 3678899999999987
Q ss_pred cccc-----C-C---HHHHHHHHhCCC
Q 024296 247 HACC-----F-E---EEEWRKLKSSKI 264 (269)
Q Consensus 247 HG~~-----~-~---~~l~~~l~~~~I 264 (269)
=.+. . + ++++..|...++
T Consensus 783 ~ti~GlGe~~Gn~~le~vv~~L~~~g~ 809 (1165)
T 2qf7_A 783 AAMDALSGNTSQPCLGSIVEALSGSER 809 (1165)
T ss_dssp EBCGGGCSBTSCCBHHHHHHHHTTSTT
T ss_pred ecccccCCCccchhHHHHHHHHHhcCC
Confidence 4442 1 2 456666665543
No 94
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=62.80 E-value=32 Score=27.48 Aligned_cols=93 Identities=16% Similarity=0.107 Sum_probs=58.3
Q ss_pred EEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHHHHHh
Q 024296 163 LLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQSMLD 239 (269)
Q Consensus 163 i~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~~ai~ 239 (269)
++-+.|..+.+.+.+.++.+.+..-+ ++.+.+.- ......++.+|+. ++.+. +|...+++.+..+++
T Consensus 12 ~i~~~~~~~~~~~~~~~~~~~~~G~~-~iev~~~~-------~~~~~~i~~ir~~~~~~~~ig--~~~v~~~~~~~~a~~ 81 (205)
T 1wa3_A 12 IVAVLRANSVEEAKEKALAVFEGGVH-LIEITFTV-------PDADTVIKELSFLKEKGAIIG--AGTVTSVEQCRKAVE 81 (205)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHTTCC-EEEEETTS-------TTHHHHHHHTHHHHHTTCEEE--EESCCSHHHHHHHHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHCCCC-EEEEeCCC-------hhHHHHHHHHHHHCCCCcEEE--ecccCCHHHHHHHHH
Confidence 44556888999888888877664322 33343321 1123456666654 34443 445557888888999
Q ss_pred cCCCcccccccCCHHHHHHHHhCCCce
Q 024296 240 FLPQRIGHACCFEEEEWRKLKSSKIPV 266 (269)
Q Consensus 240 l~a~RIGHG~~~~~~l~~~l~~~~I~l 266 (269)
.|++=| =+-...+++++..++.++++
T Consensus 82 ~Gad~i-v~~~~~~~~~~~~~~~g~~v 107 (205)
T 1wa3_A 82 SGAEFI-VSPHLDEEISQFCKEKGVFY 107 (205)
T ss_dssp HTCSEE-ECSSCCHHHHHHHHHHTCEE
T ss_pred cCCCEE-EcCCCCHHHHHHHHHcCCcE
Confidence 999988 22234577888888877765
No 95
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=62.22 E-value=20 Score=31.09 Aligned_cols=61 Identities=13% Similarity=0.164 Sum_probs=48.7
Q ss_pred hhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCccccccc--CCHHHHHHHHhCCCcee
Q 024296 204 WTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACC--FEEEEWRKLKSSKIPVR 267 (269)
Q Consensus 204 ~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~--~~~~l~~~l~~~~I~lE 267 (269)
...+.++.+..++.++++.++. ..++-+..|++.|++=|-+-.. .+|+.++.+++.+.++=
T Consensus 66 ~~Rv~pvi~~l~~~~~piSIDT---~~~~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vV 128 (280)
T 1eye_A 66 TSRVIPVVKELAAQGITVSIDT---MRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWV 128 (280)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEC---SCHHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHhhcCCCEEEEeC---CCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEE
Confidence 4568888888877799999987 6788889999999877776543 37889999999888764
No 96
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=61.99 E-value=13 Score=34.08 Aligned_cols=58 Identities=17% Similarity=0.163 Sum_probs=40.7
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecC-----CCCCCC--ChhhHHHHHHHHHHcCCceeeecCCCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLS-----GNPTKG--EWTTFLPALKFAREQGLQITLHCGEIPN 230 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~-----G~E~~~--~~~~f~~~f~~ar~~gl~~t~HAGE~~~ 230 (269)
.+++.+.+-++.+.+. +++|+-+. |.-... .-..|.++|+.|.+.|+++.+|.|....
T Consensus 172 ~d~~~a~~EL~r~~~~---G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~~~ 236 (423)
T 4dzi_A 172 ADPTRAVEEVDFVLAR---GAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDSGY 236 (423)
T ss_dssp SSHHHHHHHHHHHHHT---TCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCCST
T ss_pred cCHHHHHHHHHHHHHc---CCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCCCc
Confidence 3467677777777652 67777774 111111 1257999999999999999999998543
No 97
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=61.96 E-value=11 Score=33.57 Aligned_cols=56 Identities=25% Similarity=0.354 Sum_probs=39.2
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCCC--ChhhHHHHHHHHHHcCCceeeecCCC
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKG--EWTTFLPALKFAREQGLQITLHCGEI 228 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~--~~~~f~~~f~~ar~~gl~~t~HAGE~ 228 (269)
+++.+.+-++.+.+ ..+++||-+.+..... .-..|.++|+.|.+.|+++.+|.|..
T Consensus 139 ~~~~a~~El~r~~~--~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 139 EPEAAAREFERCIN--DLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp SHHHHHHHHHHHHH--TTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred CHHHHHHHHHHHHh--hcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 45666666666543 2357777776433222 22679999999999999999999974
No 98
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=61.64 E-value=68 Score=26.52 Aligned_cols=20 Identities=10% Similarity=0.117 Sum_probs=16.5
Q ss_pred HHHHHHHHhcCCeEEEEecC
Q 024296 79 QEVVEDFASENIVYLELRTT 98 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr~~ 98 (269)
.+.++.+++-|..++|+...
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~ 39 (290)
T 2qul_A 20 PATAKRIAGLGFDLMEISLG 39 (290)
T ss_dssp HHHHHHHHHTTCSEEEEEST
T ss_pred HHHHHHHHHhCCCEEEEecC
Confidence 56677788889999999865
No 99
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=61.63 E-value=83 Score=27.53 Aligned_cols=161 Identities=18% Similarity=0.099 Sum_probs=90.2
Q ss_pred CHHHHHHHHHHHHH---HHHhcCCeEEEEecC----------CCCc---ccCCCCHHHHHHHHHHHHHhhhhcccccccc
Q 024296 70 DHATVTRITQEVVE---DFASENIVYLELRTT----------PKRN---ESIGMSKRSYMDAVVEGLRAVSAVDVDFASR 133 (269)
Q Consensus 70 ~~~~~~~~~~~~~~---~~~~dnV~Y~Elr~~----------p~~~---~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~ 133 (269)
+.+++.++..++.+ .+.+.|.--+||-.. |..+ ...|-+.+.-.+.+.+.++..++
T Consensus 135 t~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~-------- 206 (338)
T 1z41_A 135 SAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQ-------- 206 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHH--------
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHH--------
Confidence 34566666665544 445689999999864 5432 12233555444444444444432
Q ss_pred ccccccccccccccccccCCCCCCceEEEEEE--EeCCCCHHHHHHHHHHHHhhCCCceEEEecCCC---CCC--CChhh
Q 024296 134 SIDVRRPVNTKNMNDACNGTRGKKIYVRLLLS--IDRRETTEAAMETVKLALEMRDLGVVGIDLSGN---PTK--GEWTT 206 (269)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~--~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~---E~~--~~~~~ 206 (269)
.-...+.+|+=.. .....+.+.+.+.++.+.+. ++-.|++.+. +.. .++..
T Consensus 207 -------------------~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~---Gvd~i~v~~~~~~~~~~~~~~~~ 264 (338)
T 1z41_A 207 -------------------VWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQ---GVDLIDCSSGALVHADINVFPGY 264 (338)
T ss_dssp -------------------HCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHT---TCCEEEEECCCSSCCCCCCCTTT
T ss_pred -------------------HcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHc---CCCEEEEecCccccCCCCCCccc
Confidence 1134555664321 11134566555555554443 4555665542 111 12222
Q ss_pred HHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcC-CCcccccccC--CHHHHHHHHh
Q 024296 207 FLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFL-PQRIGHACCF--EEEEWRKLKS 261 (269)
Q Consensus 207 f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~-a~RIGHG~~~--~~~l~~~l~~ 261 (269)
..+..+..++. ++++.. .|-..+++...++++-| +|-|+=|-.+ +|++.+.+++
T Consensus 265 ~~~~~~~ir~~~~iPVi~-~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~ 322 (338)
T 1z41_A 265 QVSFAEKIREQADMATGA-VGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAK 322 (338)
T ss_dssp THHHHHHHHHHHCCEEEE-CSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred hHHHHHHHHHHCCCCEEE-ECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHc
Confidence 34555555554 777654 55566789899999887 9999888543 8888777764
No 100
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=61.16 E-value=14 Score=32.55 Aligned_cols=38 Identities=5% Similarity=0.197 Sum_probs=27.0
Q ss_pred HHHHHHHHcCCceee-ecCCCCChhHHHHHHhcCCCccccc
Q 024296 209 PALKFAREQGLQITL-HCGEIPNKEEIQSMLDFLPQRIGHA 248 (269)
Q Consensus 209 ~~f~~ar~~gl~~t~-HAGE~~~~e~i~~ai~l~a~RIGHG 248 (269)
.+.+.|++.|+++.+ |+.| +++.+..+++.|++-|.|.
T Consensus 186 ~~~~~a~~~g~~v~~gH~~~--~~~~~~~a~~~G~~~i~H~ 224 (396)
T 2vhl_A 186 ELIRHLKDESIIASMGHTDA--DSALLSDAAKAGASHMTHL 224 (396)
T ss_dssp HHHHHHHHTTCEEEECSBCC--CHHHHHHHHHTTCCEESST
T ss_pred HHHHHHHHCCCEEeecccCC--CHHHHHHHHHcCCCEeEeC
Confidence 567788888999888 8877 3466667777766545554
No 101
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=60.84 E-value=34 Score=30.20 Aligned_cols=61 Identities=11% Similarity=0.149 Sum_probs=44.2
Q ss_pred hHHHHHHHHHH-cCCceeeecCCCCChhHHHHHHh-cCCC--c-ccccccCCHHHHHHHHhCCCceee
Q 024296 206 TFLPALKFARE-QGLQITLHCGEIPNKEEIQSMLD-FLPQ--R-IGHACCFEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 206 ~f~~~f~~ar~-~gl~~t~HAGE~~~~e~i~~ai~-l~a~--R-IGHG~~~~~~l~~~l~~~~I~lEi 268 (269)
-|...++.|++ .++|+.+|.-+. .+.+.+.+. .+.. + |=|++.-+.+.++.+.+.|.-+-+
T Consensus 155 ~F~~ql~lA~e~~~lPviiH~r~A--~~d~l~iL~~~~~~~~~gViH~FsGs~e~a~~~l~lG~yis~ 220 (325)
T 3ipw_A 155 GYRTLSILHQKYPYLPFFFHCRKS--WSDLCQLNKELGYNGCKGVVHCFDGTEEEMNQILNEGWDIGV 220 (325)
T ss_dssp HHHHTHHHHHHCTTCCEEEEEESC--HHHHHHHHHHTTCTTSCEEECSCCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhhCCeEEEEeCch--HHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHhcCcEEee
Confidence 48888899999 999999999874 456677765 4432 2 557766677777777777765543
No 102
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=59.18 E-value=73 Score=26.06 Aligned_cols=116 Identities=13% Similarity=0.139 Sum_probs=73.2
Q ss_pred HHHHHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCC
Q 024296 78 TQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKK 157 (269)
Q Consensus 78 ~~~~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (269)
..+.++.+++-|..++|++... . ..+.+.+ .++.+.+.+++ .|
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~-~--~~~~~~~-~~~~~~~~l~~---------------------------------~g 74 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFH-L--PLNSTDE-QIRAFHDKCAA---------------------------------HK 74 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTT-S--CTTCCHH-HHHHHHHHHHH---------------------------------TT
T ss_pred HHHHHHHHHHhCCCEEEEeccc-C--CCCCCHH-HHHHHHHHHHH---------------------------------cC
Confidence 3567888899999999998651 1 1123432 34444444443 35
Q ss_pred ceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecC--CCC---Chh
Q 024296 158 IYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG--EIP---NKE 232 (269)
Q Consensus 158 i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAG--E~~---~~e 232 (269)
+++-.+..... ...+...+.++.|..+..+.|++. .| ...+..+.+.|++.|+++.+|-- |.. +++
T Consensus 75 l~i~~~~~~~~-~~~~~~~~~i~~A~~lGa~~v~~~--p~------~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~ 145 (257)
T 3lmz_A 75 VTGYAVGPIYM-KSEEEIDRAFDYAKRVGVKLIVGV--PN------YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDAT 145 (257)
T ss_dssp CEEEEEEEEEE-CSHHHHHHHHHHHHHHTCSEEEEE--EC------GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHH
T ss_pred CeEEEEecccc-CCHHHHHHHHHHHHHhCCCEEEec--CC------HHHHHHHHHHHHHcCCEEEEecCCCcccccCCHH
Confidence 65544332221 457778888999988877666653 12 35677888899999999999865 332 345
Q ss_pred HHHHHHh
Q 024296 233 EIQSMLD 239 (269)
Q Consensus 233 ~i~~ai~ 239 (269)
.+.+.++
T Consensus 146 ~~~~ll~ 152 (257)
T 3lmz_A 146 DVWVHTK 152 (257)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5555554
No 103
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=57.99 E-value=97 Score=27.69 Aligned_cols=136 Identities=9% Similarity=0.074 Sum_probs=73.4
Q ss_pred hcCCeEEEEecC-CCCcccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCCceEEEEEE
Q 024296 87 SENIVYLELRTT-PKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLS 165 (269)
Q Consensus 87 ~dnV~Y~Elr~~-p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~ 165 (269)
.+.+-|+|+=++ |......-+...+.+..+++++.++++.- ......++.+|+-
T Consensus 174 ~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~-----------------------~~~~~~Pv~vKi~-- 228 (367)
T 3zwt_A 174 GPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGL-----------------------RRVHRPAVLVKIA-- 228 (367)
T ss_dssp GGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTS-----------------------CGGGCCEEEEEEC--
T ss_pred hhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhc-----------------------cccCCceEEEEeC--
Confidence 356889999886 65421111222445666666665543200 0012345556642
Q ss_pred EeCCCCHHHHHHHHHHHHhhCCCceEEEecC-CCC----------CCC-C-hhh---HHHHHHHHHHc---CCceeeecC
Q 024296 166 IDRRETTEAAMETVKLALEMRDLGVVGIDLS-GNP----------TKG-E-WTT---FLPALKFAREQ---GLQITLHCG 226 (269)
Q Consensus 166 ~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~-G~E----------~~~-~-~~~---f~~~f~~ar~~---gl~~t~HAG 226 (269)
-..+.++..+.++.+.+..-++|+..+-. +.+ .++ + +.. -..+....++. .+++..= |
T Consensus 229 --p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~-G 305 (367)
T 3zwt_A 229 --PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGV-G 305 (367)
T ss_dssp --SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEE-S
T ss_pred --CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEE-C
Confidence 23455666777777776655566655432 211 111 0 111 12333444432 5776544 5
Q ss_pred CCCChhHHHHHHhcCCCccccccc
Q 024296 227 EIPNKEEIQSMLDFLPQRIGHACC 250 (269)
Q Consensus 227 E~~~~e~i~~ai~l~a~RIGHG~~ 250 (269)
-..+++.+.+++..|++-++=|..
T Consensus 306 GI~s~~da~~~l~~GAd~V~vgra 329 (367)
T 3zwt_A 306 GVSSGQDALEKIRAGASLVQLYTA 329 (367)
T ss_dssp SCCSHHHHHHHHHHTCSEEEESHH
T ss_pred CCCCHHHHHHHHHcCCCEEEECHH
Confidence 556788899999999998887654
No 104
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=57.94 E-value=21 Score=34.29 Aligned_cols=77 Identities=10% Similarity=0.052 Sum_probs=53.2
Q ss_pred CceEEEecCCCCCC--CChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccccccCCHHHHHHHHhCCCc
Q 024296 188 LGVVGIDLSGNPTK--GEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIP 265 (269)
Q Consensus 188 ~~vvGidl~G~E~~--~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~~~~l~~~l~~~~I~ 265 (269)
.+++|++-.++-.. .....+...++.|++.|+++..|+.+.. .+.+...+..|+. ..|+....++.+++++ +|..
T Consensus 183 ~~v~glgE~~~~~~v~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~-~~~L~~~~~aGv~-~~H~~~~~eea~e~l~-~G~~ 259 (608)
T 3nqb_A 183 PEIGGIAEIMNMRGVIERDPRMSGIVQAGLAAEKLVCGHARGLK-NADLNAFMAAGVS-SDHELVSGEDLMAKLR-AGLT 259 (608)
T ss_dssp TTEEEEEEECCHHHHHTTCHHHHHHHHHHHHHTCEEEECCTTCC-HHHHHHHHHTTCC-EECCCCSHHHHHHHHH-TTCE
T ss_pred cCcceeeEeeccCCcCCCcHHHHHHHHHHHHcCCEEEEcCCCCC-HHHHHHHHHcCCC-eeeccCCHHHHHHHHH-CCCE
Confidence 46899875542211 1235688889999999999999998643 4446666666754 4898877777777775 4665
Q ss_pred ee
Q 024296 266 VR 267 (269)
Q Consensus 266 lE 267 (269)
+.
T Consensus 260 i~ 261 (608)
T 3nqb_A 260 IE 261 (608)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 105
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=57.94 E-value=6.5 Score=34.06 Aligned_cols=29 Identities=21% Similarity=0.502 Sum_probs=23.3
Q ss_pred CCcchhcccc---CCCCCHHHHHHHHHHhccCCCc
Q 024296 7 MPKVELHAHL---NGSIRDSTLLELARVLGEKGVI 38 (269)
Q Consensus 7 lPK~eLH~HL---~Gs~~~~tl~~la~~~~~~g~~ 38 (269)
|-++|||+|- +|+.+++.+.+.|++ .|+.
T Consensus 1 M~~~DLH~Ht~~SDg~~~~~elv~~A~~---~Gl~ 32 (292)
T 2yb1_A 1 MANIDLHFHSRTSDGALTPTEVIDRAAA---RAPA 32 (292)
T ss_dssp -CCEECCBCCTTTTCSSCHHHHHHHHHT---TCCS
T ss_pred CCccccccCCCccCCCCCHHHHHHHHHH---CCCC
Confidence 3478999998 588999999999984 6764
No 106
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=57.89 E-value=56 Score=27.38 Aligned_cols=95 Identities=14% Similarity=0.176 Sum_probs=64.6
Q ss_pred EEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCC
Q 024296 163 LLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLP 242 (269)
Q Consensus 163 i~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a 242 (269)
|+-+.|..+++.+.++++.+.+- |+..+-+.-.- ..-.+.++..++.-=...+=||=..+++.++.|++.|+
T Consensus 36 vv~Vir~~~~~~a~~~a~al~~g---Gi~~iEvt~~t-----~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA 107 (232)
T 4e38_A 36 VIPVIAIDNAEDIIPLGKVLAEN---GLPAAEITFRS-----DAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGA 107 (232)
T ss_dssp EEEEECCSSGGGHHHHHHHHHHT---TCCEEEEETTS-----TTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTC
T ss_pred EEEEEEcCCHHHHHHHHHHHHHC---CCCEEEEeCCC-----CCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCC
Confidence 67778999998888888777653 55555543211 11234555555431124556776678899999999999
Q ss_pred CcccccccCCHHHHHHHHhCCCce
Q 024296 243 QRIGHACCFEEEEWRKLKSSKIPV 266 (269)
Q Consensus 243 ~RIGHG~~~~~~l~~~l~~~~I~l 266 (269)
+=| |.-..++++++..++.++++
T Consensus 108 ~fI-vsP~~~~~vi~~~~~~gi~~ 130 (232)
T 4e38_A 108 TFV-VSPGFNPNTVRACQEIGIDI 130 (232)
T ss_dssp SEE-ECSSCCHHHHHHHHHHTCEE
T ss_pred CEE-EeCCCCHHHHHHHHHcCCCE
Confidence 776 33357899999999998875
No 107
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=57.81 E-value=73 Score=27.11 Aligned_cols=21 Identities=14% Similarity=0.078 Sum_probs=17.5
Q ss_pred HHHHHHHHHhcCCeEEEEecC
Q 024296 78 TQEVVEDFASENIVYLELRTT 98 (269)
Q Consensus 78 ~~~~~~~~~~dnV~Y~Elr~~ 98 (269)
+.+.++.+++-|..++|++..
T Consensus 38 l~~~l~~aa~~G~~~VEl~~~ 58 (305)
T 3obe_A 38 MPNGLNRLAKAGYTDLEIFGY 58 (305)
T ss_dssp HHHHHHHHHHHTCCEEEECCB
T ss_pred HHHHHHHHHHcCCCEEEeccc
Confidence 467788889999999999853
No 108
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=56.56 E-value=93 Score=28.06 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=27.2
Q ss_pred CceEEEecCCCCC---CCChhhHHHHHHHHHHcCCceeeecC
Q 024296 188 LGVVGIDLSGNPT---KGEWTTFLPALKFAREQGLQITLHCG 226 (269)
Q Consensus 188 ~~vvGidl~G~E~---~~~~~~f~~~f~~ar~~gl~~t~HAG 226 (269)
.++.||.+..... ..+...+..+++.|++.|+++.+|+-
T Consensus 144 ~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~Hae 185 (461)
T 3sfw_A 144 EGITSLKVFMAYKNVLMADDETLFKTLIRAKELGALVQVHAE 185 (461)
T ss_dssp SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECS
T ss_pred CCCCEEEEEEecCCCcccCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 3566665432211 23457788999999999999999975
No 109
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=56.17 E-value=5.8 Score=33.26 Aligned_cols=27 Identities=33% Similarity=0.409 Sum_probs=22.4
Q ss_pred cchhcccc----CCCCCHHHHHHHHHHhccCCCc
Q 024296 9 KVELHAHL----NGSIRDSTLLELARVLGEKGVI 38 (269)
Q Consensus 9 K~eLH~HL----~Gs~~~~tl~~la~~~~~~g~~ 38 (269)
++|||+|. +|+.+++.+.+.|.+ .|+.
T Consensus 1 ~~DlH~Ht~~S~DG~~~~ee~v~~A~~---~Gl~ 31 (267)
T 2yxo_A 1 MVDSHVHTPLCGHAEGHPEAYLEEARA---KGLK 31 (267)
T ss_dssp CEEEEECCGGGSSCCSCHHHHHHHHHH---TTCS
T ss_pred CCccCcCcCCCCCCCCCHHHHHHHHHH---cCCC
Confidence 47999995 788999999999885 6654
No 110
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=56.12 E-value=45 Score=28.80 Aligned_cols=60 Identities=13% Similarity=0.171 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcCCCccccccc-CCHHHHHHHHhCCCcee
Q 024296 205 TTFLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFLPQRIGHACC-FEEEEWRKLKSSKIPVR 267 (269)
Q Consensus 205 ~~f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~-~~~~l~~~l~~~~I~lE 267 (269)
....++.+..++. ++++.++. ..++-+.+|++.|++=|-+-.. .+|+.++.+++.+.++=
T Consensus 76 ~rv~pvi~~l~~~~~~piSIDT---~~~~va~aAl~aGa~iINdvsg~~d~~~~~~~a~~~~~vV 137 (282)
T 1aj0_A 76 QRVIPVVEAIAQRFEVWISVDT---SKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVC 137 (282)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEC---CCHHHHHHHHHTTCCEEEETTTTCSTTHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHhhcCCeEEEeC---CCHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhCCeEE
Confidence 3477788877766 99999987 6788889999999888876543 46888999999887763
No 111
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=56.08 E-value=20 Score=32.18 Aligned_cols=57 Identities=18% Similarity=0.248 Sum_probs=38.9
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCCC--ChhhHHHHHHHHHHcCCceeeecCCCC
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKG--EWTTFLPALKFAREQGLQITLHCGEIP 229 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~--~~~~f~~~f~~ar~~gl~~t~HAGE~~ 229 (269)
+++.+.+-++.+.+. .+++||-+...-.+. .-..|.++|+.|.+.|+++.+|.|...
T Consensus 157 ~~~~a~~EL~r~~~~--~G~~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~pV~iH~g~~~ 215 (373)
T 4inf_A 157 DPEWSAREIHRGARE--LGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQPLYIHPATSP 215 (373)
T ss_dssp SHHHHHHHHHHHHHT--SCCCCEEECSCBTTBCTTSGGGHHHHHHHHHHTCCEEECCCCCC
T ss_pred CHHHHHHHHHHHHhh--cCceEEEECCCCCCCCCCCcchHHHHHHHHHcCCeEEECCCCCC
Confidence 355555556665542 257777765432222 225799999999999999999999865
No 112
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=55.90 E-value=90 Score=26.11 Aligned_cols=52 Identities=12% Similarity=0.075 Sum_probs=36.1
Q ss_pred HHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCccccccc--C-CHHHHHHHHh
Q 024296 207 FLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACC--F-EEEEWRKLKS 261 (269)
Q Consensus 207 f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~--~-~~~l~~~l~~ 261 (269)
-.++.+.+++.|+++..=+ .++.++..|+++|++-|.==-. . -++.++.++.
T Consensus 116 ~~~vi~~~~~~gi~~ipGv---~TptEi~~A~~~Gad~vK~FPa~~~gG~~~lkal~~ 170 (232)
T 4e38_A 116 NPNTVRACQEIGIDIVPGV---NNPSTVEAALEMGLTTLKFFPAEASGGISMVKSLVG 170 (232)
T ss_dssp CHHHHHHHHHHTCEEECEE---CSHHHHHHHHHTTCCEEEECSTTTTTHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCEEcCC---CCHHHHHHHHHcCCCEEEECcCccccCHHHHHHHHH
Confidence 3457788888999987733 4788899999999998852111 1 1456666665
No 113
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=55.76 E-value=38 Score=28.82 Aligned_cols=57 Identities=21% Similarity=0.261 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCC------CC--ChhhHHHHHHHHHHcCCceeeecCCCC
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPT------KG--EWTTFLPALKFAREQGLQITLHCGEIP 229 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~------~~--~~~~f~~~f~~ar~~gl~~t~HAGE~~ 229 (269)
.++.+.+.++.+.+ ..+++||-+..+-. .. .-+.|.++|+.|.+.|+++.+|.|...
T Consensus 105 ~~~~~~~el~~~~~--~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~~ 169 (327)
T 2dvt_A 105 DPDAATEELQRCVN--DLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHPRNPL 169 (327)
T ss_dssp SHHHHHHHHHHHHH--TTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHh--cCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEECCCCCC
Confidence 34445555555543 23577776533211 11 225699999999999999999998653
No 114
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=54.20 E-value=77 Score=26.71 Aligned_cols=84 Identities=19% Similarity=0.155 Sum_probs=47.5
Q ss_pred ceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecC-CCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHH
Q 024296 158 IYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLS-GNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQS 236 (269)
Q Consensus 158 i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~-G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ 236 (269)
..+++|+-.-. ++.++.....+++.+..-+.| ..+ |....+....-...++..-...+++.+=.| ..+.+...+
T Consensus 143 ~~lKVIlEt~~-Lt~eei~~a~~ia~~aGADfV---KTSTGf~~ggAt~~dv~lmr~~vg~~v~VKasGG-Irt~~da~~ 217 (239)
T 3ngj_A 143 ALTKVIIECCY-LTNEEKVEVCKRCVAAGAEYV---KTSTGFGTHGATPEDVKLMKDTVGDKALVKAAGG-IRTFDDAMK 217 (239)
T ss_dssp SEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEE---ECCCSSSSCCCCHHHHHHHHHHHGGGSEEEEESS-CCSHHHHHH
T ss_pred CceEEEEecCC-CCHHHHHHHHHHHHHHCcCEE---ECCCCCCCCCCCHHHHHHHHHhhCCCceEEEeCC-CCCHHHHHH
Confidence 35777774333 566666666666666543322 222 222222112233445444444577766655 346677888
Q ss_pred HHhcCCCccc
Q 024296 237 MLDFLPQRIG 246 (269)
Q Consensus 237 ai~l~a~RIG 246 (269)
.+++|++|||
T Consensus 218 ~i~aGA~riG 227 (239)
T 3ngj_A 218 MINNGASRIG 227 (239)
T ss_dssp HHHTTEEEEE
T ss_pred HHHhccccee
Confidence 8899999997
No 115
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=52.92 E-value=1.2e+02 Score=26.73 Aligned_cols=161 Identities=15% Similarity=0.063 Sum_probs=89.3
Q ss_pred CHHHHHHHHHHHHHH---HHhcCCeEEEEe----------cCCCCcc---cCCCCHHHHHHHHHHHHHhhhhcccccccc
Q 024296 70 DHATVTRITQEVVED---FASENIVYLELR----------TTPKRNE---SIGMSKRSYMDAVVEGLRAVSAVDVDFASR 133 (269)
Q Consensus 70 ~~~~~~~~~~~~~~~---~~~dnV~Y~Elr----------~~p~~~~---~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~ 133 (269)
|.+++.+++.++.+. +.+-|.--+||- .+|..+. .-|-+.+.-.+-+.+.++..++.
T Consensus 134 t~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~a------- 206 (343)
T 3kru_A 134 SVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKN------- 206 (343)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHT-------
T ss_pred CHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhc-------
Confidence 456777777766553 446799999998 3575431 22336655454444444443320
Q ss_pred ccccccccccccccccccCCCCCCceEEEEEEE-e-CCCCHHHHHHHHHHHHhhCCCceEEEecC-CCCCC----CChhh
Q 024296 134 SIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSI-D-RRETTEAAMETVKLALEMRDLGVVGIDLS-GNPTK----GEWTT 206 (269)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~~-~-R~~~~~~~~~~~~~a~~~~~~~vvGidl~-G~E~~----~~~~~ 206 (269)
--.++.+.+|+=..- . -..+.++..+. +...... +-.|++. |.-.. .++..
T Consensus 207 ------------------vg~d~pv~vRls~~~~~~~g~~~~~~~~~---a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~ 264 (343)
T 3kru_A 207 ------------------WPENKPIFVRVSADDYMEGGINIDMMVEY---INMIKDK-VDLIDVSSGGLLNVDINLYPGY 264 (343)
T ss_dssp ------------------SCTTSCEEEEEECCCSSTTSCCHHHHHHH---HHHHTTT-CSEEEEECCCSSCCCCCCCTTT
T ss_pred ------------------CCccCCeEEEeechhhhccCccHHHHHHH---HHHhhcc-ccEEeccCCceEeeeecccCce
Confidence 012445666654320 0 12344544444 4444444 5566663 32111 11223
Q ss_pred HHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcC-CCccccccc--CCHHHHHHHH
Q 024296 207 FLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFL-PQRIGHACC--FEEEEWRKLK 260 (269)
Q Consensus 207 f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~-a~RIGHG~~--~~~~l~~~l~ 260 (269)
+.+..+..|+. ++++. =.|-..+++...++++-| +|=|+=|-. .+|++.+.++
T Consensus 265 ~~~~~~~ir~~~~iPVi-~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 265 QVKYAETIKKRCNIKTS-AVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp THHHHHHHHHHHTCEEE-EESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred eehHHHHHHHhcCcccc-eeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 44555555554 77764 456666788888888875 888776643 4899888877
No 116
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=51.66 E-value=48 Score=28.57 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCCC--ChhhHHHHHHHHHHcCCceeeecCCCC
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKG--EWTTFLPALKFAREQGLQITLHCGEIP 229 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~--~~~~f~~~f~~ar~~gl~~t~HAGE~~ 229 (269)
+++.+.+.++.+.+. +++||-+...-.+. .-+.|.++|+.|.+.|+++.+|.|...
T Consensus 125 ~~~~a~~el~~~~~~---g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~~~~ 182 (334)
T 2hbv_A 125 DLDLACKEASRAVAA---GHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPWDMM 182 (334)
T ss_dssp SHHHHHHHHHHHHHH---TCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECCSCS
T ss_pred CHHHHHHHHHHHHHc---CCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 344555556655542 56665443221111 225699999999999999999999753
No 117
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=51.53 E-value=1.3e+02 Score=27.01 Aligned_cols=148 Identities=14% Similarity=0.077 Sum_probs=81.7
Q ss_pred HHHHHHHHhcCCeEEEEecCCCCc-------c-----cCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccc
Q 024296 79 QEVVEDFASENIVYLELRTTPKRN-------E-----SIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNM 146 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr~~p~~~-------~-----~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (269)
.+.++++.++|...+-+....... . ....+..+.++..++-++..++
T Consensus 158 ~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~--------------------- 216 (421)
T 4hnl_A 158 YHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKE--------------------- 216 (421)
T ss_dssp HHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHH---------------------
T ss_pred HHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHH---------------------
Confidence 455667778999999988753210 0 0112334445544444444432
Q ss_pred cccccCCCCCCceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHH-cCCceeeec
Q 024296 147 NDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFARE-QGLQITLHC 225 (269)
Q Consensus 147 ~~~~~~~~~~~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~-~gl~~t~HA 225 (269)
..|-.+.+.+..+...+.+++.+.++...++. +.--|..-++.++.. ++..++ .++|+. +
T Consensus 217 --------a~G~~~~l~vDan~~~~~~~A~~~~~~l~~~~--------i~~iEeP~~~~d~~~-~~~l~~~~~ipIa--~ 277 (421)
T 4hnl_A 217 --------KYGNQFQMLHDVHERLHPNQAIQFAKAAEPYQ--------LFFLEDILPPDQSHW-LTQLRSQSATPIA--T 277 (421)
T ss_dssp --------HHTTSSEEEEECTTCSCHHHHHHHHHHHGGGC--------CSEEECCSCGGGGGG-HHHHHTTCCCCEE--E
T ss_pred --------HhCCCceEeccccccCCHHHHHHHHHHhhhhh--------hcccccCCcccchHH-HHHHHhcCCCCee--c
Confidence 11234668888999999998888777665542 222355555555433 444443 466654 6
Q ss_pred CCCC-ChhHHHHHHhcCC--------CcccccccCCHHHHHHHHhCCCcee
Q 024296 226 GEIP-NKEEIQSMLDFLP--------QRIGHACCFEEEEWRKLKSSKIPVR 267 (269)
Q Consensus 226 GE~~-~~e~i~~ai~l~a--------~RIGHG~~~~~~l~~~l~~~~I~lE 267 (269)
||.. +....+++++.++ .|+| |+.-.-.+.++....++++-
T Consensus 278 dE~~~~~~~~~~~i~~~a~d~v~~d~~~~G-Gite~~~ia~~A~~~gi~v~ 327 (421)
T 4hnl_A 278 GELFNNPMEWQELVKNRQIDFMRAHVSQIG-GITPALKLAHFCDAMGVRIA 327 (421)
T ss_dssp CTTCCSGGGTHHHHHTTCCSEECCCGGGGT-SHHHHHHHHHHHHHTTCEEC
T ss_pred CcceehhHHHHHHHhcCCceEEEeCCCCCC-CHHHHHHHHHHHHHCCCeEE
Confidence 8876 4566666665432 2222 22212235666667776653
No 118
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=51.22 E-value=23 Score=31.76 Aligned_cols=24 Identities=33% Similarity=0.641 Sum_probs=20.7
Q ss_pred ChhhHHHHHHHHHHcCCceeeecCC
Q 024296 203 EWTTFLPALKFAREQGLQITLHCGE 227 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~gl~~t~HAGE 227 (269)
+.+.+..+++.|++.|+++++|+ |
T Consensus 161 ~~~~l~~~~~~a~~~~~~v~~H~-e 184 (458)
T 1gkp_A 161 DDGEMYQTLRLAKELGVIVTAHC-E 184 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEE-S
T ss_pred CHHHHHHHHHHHHhcCCEEEEEc-C
Confidence 45678889999999999999999 5
No 119
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=50.82 E-value=34 Score=30.69 Aligned_cols=63 Identities=16% Similarity=0.108 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCC--Ccc--ccccc-CCHHHHHHHH-hCCCceee
Q 024296 206 TFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLP--QRI--GHACC-FEEEEWRKLK-SSKIPVRI 268 (269)
Q Consensus 206 ~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a--~RI--GHG~~-~~~~l~~~l~-~~~I~lEi 268 (269)
.|....+.|++.|+|+.+|.+.......+.+.+. .++ .|+ +|... .+.+..+.+. +.|.-|.+
T Consensus 170 ~f~aq~~~A~e~glPViiH~r~gr~a~d~l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~~G~yI~f 239 (363)
T 3ovg_A 170 ALEVAARTSILTGCPILVHTQLGTMALEVAKHLIGFGANPDKIQISHLNKNPDKYYYEKVIKETGVTLCF 239 (363)
T ss_dssp HHHHHHHHHHHHCCCEEEEEETTCSHHHHHHHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHhCCEEEEeCCCCCCHHHHHHHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHHCCcEEEE
Confidence 4777788888889999999986433334556664 453 454 34443 2444344444 66655544
No 120
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=50.77 E-value=43 Score=29.07 Aligned_cols=96 Identities=9% Similarity=0.038 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHH-HHHHcCCceeeecCCCCChhHHHHHHhcCCCccccc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALK-FAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHA 248 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~-~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG 248 (269)
.+.+.+...++.|.+.+.+.++.+.-.+.... +...+..+.+ .|++.++|+.+|.--..+.+.+..|++.|-+ .|-
T Consensus 26 ~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~-g~~~~~~~v~~~a~~~~VPValHlDHg~~~e~i~~ai~~GFt--SVM 102 (286)
T 1gvf_A 26 HNAETIQAILEVCSEMRSPVILAGTPGTFKHI-ALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVR--SAM 102 (286)
T ss_dssp CSHHHHHHHHHHHHHHTCCCEEEECTTHHHHS-CHHHHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHHHTTCC--EEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECChhHHhhc-CHHHHHHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHHHcCCC--eEE
Confidence 35788999999999988888887743321111 2344555444 4556799999998665578889999886421 222
Q ss_pred ccC---C--------HHHHHHHHhCCCceee
Q 024296 249 CCF---E--------EEEWRKLKSSKIPVRI 268 (269)
Q Consensus 249 ~~~---~--------~~l~~~l~~~~I~lEi 268 (269)
+.. . .+++++....++.+|.
T Consensus 103 iDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEa 133 (286)
T 1gvf_A 103 IDGSHFPFAENVKLVKSVVDFCHSQDCSVEA 133 (286)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 221 1 1478899999999984
No 121
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=50.29 E-value=63 Score=28.04 Aligned_cols=53 Identities=9% Similarity=0.107 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcC--CCcccccccC-CHHHHHHH
Q 024296 206 TFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFL--PQRIGHACCF-EEEEWRKL 259 (269)
Q Consensus 206 ~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~--a~RIGHG~~~-~~~l~~~l 259 (269)
.+.++++.+++.|+++++...=.. ++.+....+.| .+++.-++.. +++..+.+
T Consensus 158 ~l~~ll~~~~~~g~~i~l~TNG~~-~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i 213 (342)
T 2yx0_A 158 YMGDLVEEFHKRGFTTFIVTNGTI-PERLEEMIKEDKLPTQLYVSITAPDIETYNSV 213 (342)
T ss_dssp THHHHHHHHHHTTCEEEEEECSCC-HHHHHHHHHTTCCCSEEEEEECCSSHHHHHHH
T ss_pred hHHHHHHHHHHCCCcEEEEcCCCc-HHHHHHHHhcCCCCCEEEEEccCCCHHHHHHH
Confidence 788899999999999998853333 55555555566 8888888765 45544443
No 122
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=48.99 E-value=47 Score=30.17 Aligned_cols=97 Identities=10% Similarity=0.121 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHhhC-CCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCC------ChhHHHHHHhcCCC
Q 024296 171 TTEAAMETVKLALEMR-DLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIP------NKEEIQSMLDFLPQ 243 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~-~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~------~~e~i~~ai~l~a~ 243 (269)
..++..+.++.|.++. ...+..+=...+....-...|..+.+.|++.|+.+.+=..-.. +.+++...-++|++
T Consensus 39 ~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~~dl~~f~~lGi~ 118 (385)
T 1x7f_A 39 TKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSDLSFFAELGAD 118 (385)
T ss_dssp CHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC------CCCTHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcCCC
Confidence 4566678888888753 2335555433221122347799999999999999999875433 12344444456765
Q ss_pred --cccccccCCHHHHHHHHhC--CCceeeC
Q 024296 244 --RIGHACCFEEEEWRKLKSS--KIPVRIS 269 (269)
Q Consensus 244 --RIGHG~~~~~~l~~~l~~~--~I~lEic 269 (269)
|++.|+.. +....|-.+ |+.||++
T Consensus 119 gLRLD~Gf~~--~eia~ls~n~~glkIeLN 146 (385)
T 1x7f_A 119 GIRLDVGFDG--LTEAKMTNNPYGLKIELN 146 (385)
T ss_dssp EEEESSCCSS--HHHHHHTTCTTCCEEEEE
T ss_pred EEEEcCCCCH--HHHHHHhcCCCCCEEEEe
Confidence 88888743 444556555 3666653
No 123
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=48.13 E-value=30 Score=30.12 Aligned_cols=79 Identities=16% Similarity=0.072 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHH-cCCceeeecCCCCChhHHHHHHhcCCCccccc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFARE-QGLQITLHCGEIPNKEEIQSMLDFLPQRIGHA 248 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~-~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG 248 (269)
.+|+++.+.++.. --+..=++|+-+-.-.++.|..=.+.++..++ .++|+++|-|=..+.+.++.|+.+|..-|-=+
T Consensus 155 T~Peea~~Fv~~T--gvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~ 232 (286)
T 1gvf_A 155 TDPQEAKRFVELT--GVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVA 232 (286)
T ss_dssp CCHHHHHHHHHHH--CCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred CCHHHHHHHHHHH--CCCEEEeecCccccCcCCCCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHCCCeEEEEC
Confidence 4688887776642 11223445555422222334333344555555 48999999998778899999988887666555
Q ss_pred cc
Q 024296 249 CC 250 (269)
Q Consensus 249 ~~ 250 (269)
+.
T Consensus 233 Td 234 (286)
T 1gvf_A 233 TE 234 (286)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 124
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=48.07 E-value=30 Score=29.47 Aligned_cols=59 Identities=19% Similarity=0.174 Sum_probs=38.1
Q ss_pred ceEEEecCCCCC---CCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCCCc--ccccc
Q 024296 189 GVVGIDLSGNPT---KGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQR--IGHAC 249 (269)
Q Consensus 189 ~vvGidl~G~E~---~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a~R--IGHG~ 249 (269)
+++||.+.-... ...-+.|.+.++.|++.|+++.+|.+... ...+.+.+. +. -| |.|.-
T Consensus 118 gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~~~-l~~~~~~l~~~p-~~~Vi~H~g 182 (294)
T 4i6k_A 118 GIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELHAPPKY-LVQLLPQLNEYS-FDVVIDHFG 182 (294)
T ss_dssp TEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEECCHHH-HHHHHHHHTTSS-SCEEESGGG
T ss_pred CCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEeeCcch-HHHHHHHHHHCC-CCEEEECCC
Confidence 799988753211 11236799999999999999999997521 233445444 33 34 35653
No 125
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=46.77 E-value=40 Score=29.03 Aligned_cols=57 Identities=14% Similarity=0.267 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCCC--ChhhHHHHHHHHHHcCCceeeecCCCC
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKG--EWTTFLPALKFAREQGLQITLHCGEIP 229 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~--~~~~f~~~f~~ar~~gl~~t~HAGE~~ 229 (269)
+++.+.+.++.+.+ ..+++||-+...-.+. .-+.|.++|+.|.+.|+++.+|.|...
T Consensus 121 ~~~~a~~el~~~~~--~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~~~~ 179 (336)
T 2wm1_A 121 APELAVKEMERCVK--ELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWDMQ 179 (336)
T ss_dssp SHHHHHHHHHHHHH--TSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECCSCC
T ss_pred CHHHHHHHHHHHHH--ccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCCCCC
Confidence 34455555665553 2368888553211111 125699999999999999999999754
No 126
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=46.21 E-value=10 Score=31.78 Aligned_cols=29 Identities=21% Similarity=0.354 Sum_probs=21.8
Q ss_pred chhcccc-----CCCCCHHHHHHHHHHhccCCCc
Q 024296 10 VELHAHL-----NGSIRDSTLLELARVLGEKGVI 38 (269)
Q Consensus 10 ~eLH~HL-----~Gs~~~~tl~~la~~~~~~g~~ 38 (269)
+|+|+|. +|+-++++..+++++..+.|+.
T Consensus 6 ~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~ 39 (247)
T 2wje_A 6 IDIHSHIVFDVDDGPKSREESKALLAESYRQGVR 39 (247)
T ss_dssp EECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEE
T ss_pred EEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 7999999 7889999876665554356753
No 127
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=46.16 E-value=50 Score=27.08 Aligned_cols=105 Identities=10% Similarity=-0.039 Sum_probs=60.7
Q ss_pred CCceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCC------------CCChhhHHHHHHHHHHcCCceee
Q 024296 156 KKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPT------------KGEWTTFLPALKFAREQGLQITL 223 (269)
Q Consensus 156 ~~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~------------~~~~~~f~~~f~~ar~~gl~~t~ 223 (269)
.+|++.+.....|..+.+. .++.+.+. |+-||.+..... ..++.....+-+.+++.||+++.
T Consensus 8 ~~mklg~~~~~~~~~~~~~---~l~~~~~~---G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 81 (262)
T 3p6l_A 8 NGWRLGMQSYSFHLFPLTE---ALDKTQEL---GLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVG 81 (262)
T ss_dssp TTEEEEEEGGGGTTSCHHH---HHHHHHHT---TCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCcEEEEEecccCCCCHHH---HHHHHHHc---CCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 4678888777778777654 44444443 677888875421 12233445556677788999988
Q ss_pred ecCCCC-ChhHHH----HHHhcCCCcccccccC--CHHHHHHHHhCCCce
Q 024296 224 HCGEIP-NKEEIQ----SMLDFLPQRIGHACCF--EEEEWRKLKSSKIPV 266 (269)
Q Consensus 224 HAGE~~-~~e~i~----~ai~l~a~RIGHG~~~--~~~l~~~l~~~~I~l 266 (269)
|..-.. ..+.+. .|-.+|++.|.-.... -..+.++.++.||.+
T Consensus 82 ~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a~~~gv~l 131 (262)
T 3p6l_A 82 TGVYVAEKSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKI 131 (262)
T ss_dssp EEEECCSSTTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEE
T ss_pred EeccCCccHHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHHHHhCCEE
Confidence 865432 223333 3444788876543211 134556666666543
No 128
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=46.03 E-value=1.1e+02 Score=26.15 Aligned_cols=95 Identities=7% Similarity=0.022 Sum_probs=55.7
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcCCCccccc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFLPQRIGHA 248 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG 248 (269)
++.++..++++.+.+..-+.+-.-..+..+......+..++++.+++. ++++.+|. .+.+.+..|++.|+++|.=-
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~---~n~~~i~~a~~~G~~~V~i~ 99 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV---PNMKGYEAAAAAHADEIAVF 99 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC---SSHHHHHHHHHTTCSEEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe---CCHHHHHHHHHCCCCEEEEE
Confidence 456777777776655433322221112222111012344555555554 89999998 46788888999998887433
Q ss_pred ccCC-------------------HHHHHHHHhCCCcee
Q 024296 249 CCFE-------------------EEEWRKLKSSKIPVR 267 (269)
Q Consensus 249 ~~~~-------------------~~l~~~l~~~~I~lE 267 (269)
+..+ .+.+++.++.++.+|
T Consensus 100 ~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~ 137 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIR 137 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 2111 135788899999887
No 129
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=45.47 E-value=57 Score=27.36 Aligned_cols=57 Identities=19% Similarity=0.172 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCC--CChhhHHHHHHHHHHcCCceeeecCCCC
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTK--GEWTTFLPALKFAREQGLQITLHCGEIP 229 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~--~~~~~f~~~f~~ar~~gl~~t~HAGE~~ 229 (269)
+++.+.+.++.+.+ ..+++||-+..+-.. ..-+.|.++|+.|.+.|+++.+|.|...
T Consensus 101 ~~~~~~~el~~~~~--~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~~ 159 (307)
T 2f6k_A 101 YELDAVKTVQQALD--QDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHPNEPA 159 (307)
T ss_dssp CHHHHHHHHHHHHH--TSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEECCCCS
T ss_pred CHHHHHHHHHHHHh--ccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECCCCCc
Confidence 34555555555543 235777744322111 1125699999999999999999999754
No 130
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=45.43 E-value=14 Score=33.69 Aligned_cols=27 Identities=26% Similarity=0.388 Sum_probs=23.0
Q ss_pred CChhhHHHHHHHHHHcCCceeeecCCC
Q 024296 202 GEWTTFLPALKFAREQGLQITLHCGEI 228 (269)
Q Consensus 202 ~~~~~f~~~f~~ar~~gl~~t~HAGE~ 228 (269)
.+.+.+..+++.|++.|+++.+|+.|.
T Consensus 203 ~~~e~l~~~~~~A~~~g~~v~~H~~~~ 229 (467)
T 1xrt_A 203 MDSSVMRKALELASQLGVPIMDHCEDD 229 (467)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEECCCGG
T ss_pred CCHHHHHHHHHHHHhcCCEEEEECCCH
Confidence 345778899999999999999999773
No 131
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=45.43 E-value=1.3e+02 Score=24.86 Aligned_cols=72 Identities=11% Similarity=0.161 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhhCCCceEEE-ecCCCCC-CCChhh----HHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCCCcc
Q 024296 173 EAAMETVKLALEMRDLGVVGI-DLSGNPT-KGEWTT----FLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQRI 245 (269)
Q Consensus 173 ~~~~~~~~~a~~~~~~~vvGi-dl~G~E~-~~~~~~----f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a~RI 245 (269)
+.....++.|..+..+.|+-. +.. ++. ...+.. +..+...|++.|+.+.+|-.- .+++.+...++ .+..++
T Consensus 102 ~~~~~~i~~a~~lG~~~v~~~~G~~-~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~-~~~~~~~~l~~~~~~~~~ 179 (290)
T 3tva_A 102 AEMKEISDFASWVGCPAIGLHIGFV-PESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ-ESADHLLEFIEDVNRPNL 179 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCC-CCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCS-SCHHHHHHHHHHHCCTTE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCC-cccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCC-CCHHHHHHHHHhcCCCCE
Confidence 345566667766655544321 111 111 111222 444555677789999998753 35666666665 465555
Q ss_pred c
Q 024296 246 G 246 (269)
Q Consensus 246 G 246 (269)
|
T Consensus 180 g 180 (290)
T 3tva_A 180 G 180 (290)
T ss_dssp E
T ss_pred E
Confidence 4
No 132
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=44.79 E-value=1.3e+02 Score=24.75 Aligned_cols=105 Identities=15% Similarity=0.144 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCC
Q 024296 78 TQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKK 157 (269)
Q Consensus 78 ~~~~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (269)
+.++++.+.+-||..+|+|..-. +..+.++.+.+.+...
T Consensus 31 ~~~~~~al~~gGv~~iel~~k~~-------~~~~~i~~l~~~~~~l---------------------------------- 69 (224)
T 1vhc_A 31 ILPLADTLAKNGLSVAEITFRSE-------AAADAIRLLRANRPDF---------------------------------- 69 (224)
T ss_dssp HHHHHHHHHHTTCCEEEEETTST-------THHHHHHHHHHHCTTC----------------------------------
T ss_pred HHHHHHHHHHcCCCEEEEeccCc-------hHHHHHHHHHHhCcCc----------------------------------
Q ss_pred ceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHH
Q 024296 158 IYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSM 237 (269)
Q Consensus 158 i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~a 237 (269)
+....--.+. +.++.|.+..-++| .+|..+ .++.+.+++.|.++.+ | ..+++.+..|
T Consensus 70 -----~vgaGtvl~~----d~~~~A~~aGAd~v----~~p~~d-------~~v~~~ar~~g~~~i~--G-v~t~~e~~~A 126 (224)
T 1vhc_A 70 -----LIAAGTVLTA----EQVVLAKSSGADFV----VTPGLN-------PKIVKLCQDLNFPITP--G-VNNPMAIEIA 126 (224)
T ss_dssp -----EEEEESCCSH----HHHHHHHHHTCSEE----ECSSCC-------HHHHHHHHHTTCCEEC--E-ECSHHHHHHH
T ss_pred -----EEeeCcEeeH----HHHHHHHHCCCCEE----EECCCC-------HHHHHHHHHhCCCEEe--c-cCCHHHHHHH
Q ss_pred HhcCCCccc
Q 024296 238 LDFLPQRIG 246 (269)
Q Consensus 238 i~l~a~RIG 246 (269)
.++|++=|+
T Consensus 127 ~~~Gad~vk 135 (224)
T 1vhc_A 127 LEMGISAVK 135 (224)
T ss_dssp HHTTCCEEE
T ss_pred HHCCCCEEE
No 133
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=44.72 E-value=59 Score=29.77 Aligned_cols=71 Identities=14% Similarity=0.101 Sum_probs=44.3
Q ss_pred ceEEEecCCCCCC-CChhhHHHHHHHHHHc-----CCceee--ecCCCCChhHHHHHHhcCCCcccccccC-CHHHHHHH
Q 024296 189 GVVGIDLSGNPTK-GEWTTFLPALKFAREQ-----GLQITL--HCGEIPNKEEIQSMLDFLPQRIGHACCF-EEEEWRKL 259 (269)
Q Consensus 189 ~vvGidl~G~E~~-~~~~~f~~~f~~ar~~-----gl~~t~--HAGE~~~~e~i~~ai~l~a~RIGHG~~~-~~~l~~~l 259 (269)
.+..+-+.|.+.. .++..+..+++.+++. +..+++ +.+- .+++.+...-+.|..||..|++. ++++++.|
T Consensus 104 ~i~~i~fgGGtpt~l~~~~l~~ll~~i~~~~~~~~~~eitie~~p~~-l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i 182 (457)
T 1olt_A 104 HVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPRE-IELDVLDHLRAEGFNRLSMGVQDFNKEVQRLV 182 (457)
T ss_dssp CEEEEEEEESCGGGSCHHHHHHHHHHHHHHSCEEEEEEEEEEECSSS-CCTHHHHHHHHTTCCEEEEEEECCCHHHHHHH
T ss_pred ceEEEEEeCCCcccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEccCc-CCHHHHHHHHHcCCCEEEEeeccCCHHHHHHh
Confidence 4677777765432 3567788899988872 234444 3322 23454444445899999999975 66555444
Q ss_pred H
Q 024296 260 K 260 (269)
Q Consensus 260 ~ 260 (269)
.
T Consensus 183 ~ 183 (457)
T 1olt_A 183 N 183 (457)
T ss_dssp T
T ss_pred C
Confidence 3
No 134
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=44.14 E-value=46 Score=29.26 Aligned_cols=96 Identities=15% Similarity=0.096 Sum_probs=62.3
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHH-HHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccc-c
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLP-ALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGH-A 248 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~-~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGH-G 248 (269)
+.+.+..+++.|.+.+.+.|+.+.-.+....+ ..+.. +-..|++.++|+.+|.--..+.+.+..|++..-.+.|- |
T Consensus 36 n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g--~~~~~~~~~~A~~~~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~G 113 (306)
T 3pm6_A 36 NLEGILAIIRAAEHKRSPAMILLFPWAIQYAD--SLLVRTAASACRAASVPITLHLDHAQDPEIIKRAADLSRSETHEPG 113 (306)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECHHHHHHHT--THHHHHHHHHHHHCSSCEEEEEEEECCHHHHHHHHHTC------CC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhHHhhcc--HHHHHHHHHHHHHCCCCEEEEcCCCCCHHHHHHHHHhhhhccCCCC
Confidence 57889999999999888888777432211111 12333 33456678999999986666788899999964344333 3
Q ss_pred ccC---C----H---------HHHHHHHhCCCceee
Q 024296 249 CCF---E----E---------EEWRKLKSSKIPVRI 268 (269)
Q Consensus 249 ~~~---~----~---------~l~~~l~~~~I~lEi 268 (269)
+.. | | +++++....++.+|.
T Consensus 114 FtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEa 149 (306)
T 3pm6_A 114 FDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEA 149 (306)
T ss_dssp CSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 321 1 1 378899999999985
No 135
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=43.08 E-value=37 Score=30.69 Aligned_cols=94 Identities=11% Similarity=0.123 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHhhC-CCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCC------ChhHHHHHHhcCCC-
Q 024296 172 TEAAMETVKLALEMR-DLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIP------NKEEIQSMLDFLPQ- 243 (269)
Q Consensus 172 ~~~~~~~~~~a~~~~-~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~------~~e~i~~ai~l~a~- 243 (269)
.++..+.++.|.++. ...+..+-+..++...-...|..+.+.|++.|+.+.+-..-.. +.+++...-++|++
T Consensus 16 ~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~dl~~~~~lGi~g 95 (372)
T 2p0o_A 16 TNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDELEPLIELGVTG 95 (372)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTBCHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcCCCE
Confidence 445568889888764 3446677554322222346799999999999999998763211 11333344446654
Q ss_pred -cccccccCCHHHHHHHHhCCCceee
Q 024296 244 -RIGHACCFEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 244 -RIGHG~~~~~~l~~~l~~~~I~lEi 268 (269)
|++.|+. .+.+..|-.+ +.+|+
T Consensus 96 lRLD~Gf~--~~eia~ls~n-lkIeL 118 (372)
T 2p0o_A 96 LRMDYGIT--IEQMAHASHK-IDIGL 118 (372)
T ss_dssp EEECSSCC--HHHHHHHHTT-SEEEE
T ss_pred EEEcCCCC--HHHHHHHhcC-CEEEE
Confidence 8888873 3444444443 66665
No 136
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=42.91 E-value=12 Score=31.37 Aligned_cols=27 Identities=22% Similarity=0.400 Sum_probs=23.0
Q ss_pred cchhcccc---CCCCCHHHHHHHHHHhccCCCc
Q 024296 9 KVELHAHL---NGSIRDSTLLELARVLGEKGVI 38 (269)
Q Consensus 9 K~eLH~HL---~Gs~~~~tl~~la~~~~~~g~~ 38 (269)
++|||+|. +|+.+++.+.+.|++ .|+.
T Consensus 21 ~~DlH~Ht~~SDg~~t~ee~v~~A~~---~Gl~ 50 (255)
T 2anu_A 21 LCDFHVHTNMSDGHLPLGEVVDLFGK---HGVD 50 (255)
T ss_dssp EEEEEECCTTTTCSSCHHHHHHHHHH---TTCS
T ss_pred EEEEeecCCCcCCCCCHHHHHHHHHH---CCCC
Confidence 58999999 799999999999885 6764
No 137
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=42.52 E-value=1.5e+02 Score=24.82 Aligned_cols=19 Identities=16% Similarity=0.174 Sum_probs=14.8
Q ss_pred HHHHHHHHhcCCeEEEEecC
Q 024296 79 QEVVEDFASENIVYLELRTT 98 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr~~ 98 (269)
.+ ++.+++-|..++|++..
T Consensus 40 ~~-l~~~~~~G~~~vEl~~~ 58 (309)
T 2hk0_A 40 PY-IEKVAKLGFDIIEVAAH 58 (309)
T ss_dssp HH-HHHHHHTTCSEEEEEHH
T ss_pred HH-HHHHHHhCCCEEEeccC
Confidence 34 66777889999999864
No 138
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=42.39 E-value=33 Score=29.83 Aligned_cols=78 Identities=17% Similarity=0.182 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHH-cCCceeeecCCCCChhHHHHHHhcCCCccccc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFARE-QGLQITLHCGEIPNKEEIQSMLDFLPQRIGHA 248 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~-~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG 248 (269)
.+|+++.+.++..- .+..=++|+-+-.-.++.|..=.+.++..++ -++|+++|.|=..+.+.++.|+.+|..-|-=+
T Consensus 159 T~Peea~~Fv~~Tg--vD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~ 236 (288)
T 3q94_A 159 ADPAECKHLVEATG--IDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLGTSKINVN 236 (288)
T ss_dssp CCHHHHHHHHHHHC--CSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHHTTEEEEEEC
T ss_pred CCHHHHHHHHHHHC--CCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHcCCeEEEEC
Confidence 35887777665321 1222345554422222333333334444444 49999999998778899999999887766555
Q ss_pred c
Q 024296 249 C 249 (269)
Q Consensus 249 ~ 249 (269)
+
T Consensus 237 T 237 (288)
T 3q94_A 237 T 237 (288)
T ss_dssp H
T ss_pred h
Confidence 4
No 139
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=41.77 E-value=1.4e+02 Score=24.37 Aligned_cols=19 Identities=16% Similarity=-0.104 Sum_probs=16.0
Q ss_pred HHHHHHHHhcCCeEEEEec
Q 024296 79 QEVVEDFASENIVYLELRT 97 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr~ 97 (269)
.+.++.+++-|..++|+..
T Consensus 26 ~~~l~~~~~~G~~~vEl~~ 44 (269)
T 3ngf_A 26 LERFRLAAEAGFGGVEFLF 44 (269)
T ss_dssp HHHHHHHHHTTCSEEECSC
T ss_pred HHHHHHHHHcCCCEEEecC
Confidence 5677788889999999985
No 140
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=41.35 E-value=83 Score=27.37 Aligned_cols=89 Identities=20% Similarity=0.220 Sum_probs=57.6
Q ss_pred HHHHHHHHhhCCCceEEEecCCCCC--C---CC----hhhHHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcCCCcc
Q 024296 176 METVKLALEMRDLGVVGIDLSGNPT--K---GE----WTTFLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFLPQRI 245 (269)
Q Consensus 176 ~~~~~~a~~~~~~~vvGidl~G~E~--~---~~----~~~f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~a~RI 245 (269)
.+.++.|.++...|---||+.|.-. + -+ ...+.++.+..++. ++++.+.. ..++-+.+|++.|++=|
T Consensus 63 ~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT---~~~~V~~aAl~aGa~iI 139 (297)
T 1tx2_A 63 DAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDT---YKAEVAKQAIEAGAHII 139 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEEC---SCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeC---CCHHHHHHHHHcCCCEE
Confidence 4444555554444544455544221 1 11 23467777887765 99999987 57888889999988888
Q ss_pred ccccc--CCHHHHHHHHhCCCcee
Q 024296 246 GHACC--FEEEEWRKLKSSKIPVR 267 (269)
Q Consensus 246 GHG~~--~~~~l~~~l~~~~I~lE 267 (269)
-.-.. .+|++++.+++.+.++=
T Consensus 140 Ndvsg~~~d~~m~~~aa~~g~~vV 163 (297)
T 1tx2_A 140 NDIWGAKAEPKIAEVAAHYDVPII 163 (297)
T ss_dssp EETTTTSSCTHHHHHHHHHTCCEE
T ss_pred EECCCCCCCHHHHHHHHHhCCcEE
Confidence 65443 36888889998887663
No 141
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=40.79 E-value=97 Score=26.43 Aligned_cols=44 Identities=14% Similarity=0.107 Sum_probs=27.8
Q ss_pred hhHHHHHHHHHHcCCceeeecCC--CCCh-hHHHHHHhcCCCcc-ccccc
Q 024296 205 TTFLPALKFAREQGLQITLHCGE--IPNK-EEIQSMLDFLPQRI-GHACC 250 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HAGE--~~~~-e~i~~ai~l~a~RI-GHG~~ 250 (269)
+.-..+...| .|+++|+|-.= ..++ +.+...+++|.+|| -||-.
T Consensus 104 ~~~~~Li~~a--~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~ 151 (256)
T 1twd_A 104 PRMEKIMAAA--GPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQK 151 (256)
T ss_dssp HHHHHHHHHH--TTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTS
T ss_pred HHHHHHHHHh--CCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCC
Confidence 3344444444 48999999653 2344 34556667999999 46653
No 142
>3nzt_A Glutamate--cysteine ligase; structural genomics, center for structural genomics of infec diseases, csgid, alpha and beta proteins; HET: AMP; 2.00A {Francisella tularensis subsp}
Probab=39.91 E-value=29 Score=32.92 Aligned_cols=37 Identities=19% Similarity=0.355 Sum_probs=25.6
Q ss_pred HHHHHHhcCCeEEEEecC-CCCcccCCCCHHHH--HHHHH
Q 024296 81 VVEDFASENIVYLELRTT-PKRNESIGMSKRSY--MDAVV 117 (269)
Q Consensus 81 ~~~~~~~dnV~Y~Elr~~-p~~~~~~g~~~~~~--~~~v~ 117 (269)
-++.+.+.||.|+|+|.. .......|++.+++ ++.++
T Consensus 320 P~~aL~~~GI~YIElR~lDlnPf~~~GIs~~~l~FL~lfL 359 (525)
T 3nzt_A 320 PACALYNRGVEYVEVRVLDVDPFEPVGISKDTALFVEVML 359 (525)
T ss_dssp HHHHHHHHCCCEEEECCCBCCTTSTTSCCHHHHHHHHHHH
T ss_pred chHHHHhcCCCEEEEEeecCCCCcccCcCHHHHHHHHHHH
Confidence 367788889999999963 33345668887665 44443
No 143
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=39.08 E-value=98 Score=25.83 Aligned_cols=44 Identities=23% Similarity=0.322 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHcCCceeeecCC--C--CCh-hHHHHHHhcCCCccc-cccc
Q 024296 205 TTFLPALKFAREQGLQITLHCGE--I--PNK-EEIQSMLDFLPQRIG-HACC 250 (269)
Q Consensus 205 ~~f~~~f~~ar~~gl~~t~HAGE--~--~~~-e~i~~ai~l~a~RIG-HG~~ 250 (269)
+.-..+.+.| .|+++|+|-.= . .++ +.+...+++|.+||= ||-.
T Consensus 107 ~~~~~Li~~a--~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~~ 156 (224)
T 2bdq_A 107 EAIEQLLPAT--QGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSS 156 (224)
T ss_dssp HHHHHHHHHH--TTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCS
T ss_pred HHHHHHHHHh--CCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCCCC
Confidence 3444445444 39999999643 2 333 345566779999984 7754
No 144
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=38.91 E-value=15 Score=30.29 Aligned_cols=27 Identities=30% Similarity=0.343 Sum_probs=20.8
Q ss_pred cchhccccC----CCCCHHHHHHHHHHhccCCCc
Q 024296 9 KVELHAHLN----GSIRDSTLLELARVLGEKGVI 38 (269)
Q Consensus 9 K~eLH~HL~----Gs~~~~tl~~la~~~~~~g~~ 38 (269)
++|||+|.. |..+++.+.+.|.+ .|+.
T Consensus 3 ~~DlH~Ht~~Sd~g~~~~~e~v~~A~~---~Gl~ 33 (245)
T 1m65_A 3 PVDLHMHTVASTHAYSTLSDYIAQAKQ---KGIK 33 (245)
T ss_dssp CEECCBCCTTSTTCCCCHHHHHHHHHH---HTCC
T ss_pred ceEeCcCCCCCCCCCCcHHHHHHHHHH---CCCC
Confidence 689999975 45589999888885 5653
No 145
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=38.62 E-value=1.8e+02 Score=24.66 Aligned_cols=47 Identities=11% Similarity=0.012 Sum_probs=30.4
Q ss_pred HHHHHHHHc---CCceeeecCCCCChhHHHHHHhcCCCccccccc--C-CHHHH
Q 024296 209 PALKFAREQ---GLQITLHCGEIPNKEEIQSMLDFLPQRIGHACC--F-EEEEW 256 (269)
Q Consensus 209 ~~f~~ar~~---gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~--~-~~~l~ 256 (269)
+..+..++. ++++..= |=..+++.+.+++..||+-++=|.. . +|.+.
T Consensus 230 ~~i~~v~~~~~~~ipvi~~-GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~ 282 (311)
T 1jub_A 230 ANVRAFYTRLKPEIQIIGT-GGIETGQDAFEHLLCGATMLQIGTALHKEGPAIF 282 (311)
T ss_dssp HHHHHHHTTSCTTSEEEEE-SSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHH
T ss_pred HHHHHHHHhcCCCCCEEEE-CCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHH
Confidence 444445443 5777554 5556788899999889999965543 2 55543
No 146
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=38.10 E-value=1.7e+02 Score=24.11 Aligned_cols=21 Identities=14% Similarity=0.053 Sum_probs=17.3
Q ss_pred HHHHHHHHHhcCCeEEEEecC
Q 024296 78 TQEVVEDFASENIVYLELRTT 98 (269)
Q Consensus 78 ~~~~~~~~~~dnV~Y~Elr~~ 98 (269)
+.+.++.+++-|..++|++..
T Consensus 40 ~~~~l~~~~~~G~~~vEl~~~ 60 (287)
T 3kws_A 40 LNEKLDFMEKLGVVGFEPGGG 60 (287)
T ss_dssp HHHHHHHHHHTTCCEEECBST
T ss_pred HHHHHHHHHHcCCCEEEecCC
Confidence 356777888899999999876
No 147
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=37.84 E-value=1.9e+02 Score=24.62 Aligned_cols=97 Identities=14% Similarity=0.079 Sum_probs=52.3
Q ss_pred CceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHH
Q 024296 157 KIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQS 236 (269)
Q Consensus 157 ~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ 236 (269)
+..+++|+-.. -++.++.....+++.+...+.|. -. .|-...+...+-..+++..-...+++.+=.|= .+.+...+
T Consensus 158 ~~~lKVIlEt~-~Lt~eei~~A~~ia~eaGADfVK-TS-TGf~~~GAT~edV~lm~~~vg~~v~VKaAGGI-rt~~~al~ 233 (260)
T 3r12_A 158 GKVVKVIIETC-YLDTEEKIAACVISKLAGAHFVK-TS-TGFGTGGATAEDVHLMKWIVGDEMGVKASGGI-RTFEDAVK 233 (260)
T ss_dssp TSEEEEECCGG-GCCHHHHHHHHHHHHHTTCSEEE-CC-CSSSSCCCCHHHHHHHHHHHCTTSEEEEESSC-CSHHHHHH
T ss_pred CCcEEEEEeCC-CCCHHHHHHHHHHHHHhCcCEEE-cC-CCCCCCCCCHHHHHHHHHHhCCCceEEEeCCC-CCHHHHHH
Confidence 55678877443 24566666666777665444222 11 12111121122334454443445777776653 45677788
Q ss_pred HHhcCCCcccccccCCHHHHHHH
Q 024296 237 MLDFLPQRIGHACCFEEEEWRKL 259 (269)
Q Consensus 237 ai~l~a~RIGHG~~~~~~l~~~l 259 (269)
.++.|++||| +..-..+++-+
T Consensus 234 mi~aGA~RiG--tS~g~~I~~~~ 254 (260)
T 3r12_A 234 MIMYGADRIG--TSSGVKIVQGG 254 (260)
T ss_dssp HHHTTCSEEE--ESCHHHHHHHH
T ss_pred HHHcCCceee--cchHHHHHHHH
Confidence 8889999997 33333444433
No 148
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=37.77 E-value=1.7e+02 Score=24.01 Aligned_cols=71 Identities=7% Similarity=-0.011 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhhCCCceEEEecCCCCCC--CC---h----hhHHHHHHHHHHcCCceeeecCCCC---ChhHHHHHHh-c
Q 024296 174 AAMETVKLALEMRDLGVVGIDLSGNPTK--GE---W----TTFLPALKFAREQGLQITLHCGEIP---NKEEIQSMLD-F 240 (269)
Q Consensus 174 ~~~~~~~~a~~~~~~~vvGidl~G~E~~--~~---~----~~f~~~f~~ar~~gl~~t~HAGE~~---~~e~i~~ai~-l 240 (269)
.....++.|..+..+.|+.. .|.... .+ + ..+..+...|++.|+.+.+|--... +++.+...++ .
T Consensus 85 ~~~~~i~~A~~lG~~~v~~~--~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~~ 162 (286)
T 3dx5_A 85 KCEQLAILANWFKTNKIRTF--AGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEV 162 (286)
T ss_dssp HHHHHHHHHHHHTCCEEEEC--SCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEc--CCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHhc
Confidence 44556667766665544432 232111 11 1 2244455677788999998864322 3555666665 4
Q ss_pred CCCccc
Q 024296 241 LPQRIG 246 (269)
Q Consensus 241 ~a~RIG 246 (269)
+..++|
T Consensus 163 ~~~~vg 168 (286)
T 3dx5_A 163 DHPNLK 168 (286)
T ss_dssp CCTTEE
T ss_pred CCCCeE
Confidence 656654
No 149
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=37.74 E-value=1.3e+02 Score=25.24 Aligned_cols=71 Identities=14% Similarity=0.044 Sum_probs=46.9
Q ss_pred HHHHhhCCCceEEEecCCCCCCCChhhHHHHHHH-HHHcCCceeeecCCCCChhHHHHHHhcCCCcccccccC--C----
Q 024296 180 KLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKF-AREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCF--E---- 252 (269)
Q Consensus 180 ~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~-ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~--~---- 252 (269)
....+..-+++.-+||.| . -.++.+. +++-.+|+++-.|-. +. ++...+ .|++||.=|..+ +
T Consensus 45 ~~~~~~Ga~~l~vvDL~~----~----n~~~i~~i~~~~~~pv~vgGGir-~~-~~~~~l-~Ga~~Viigs~a~~~~g~~ 113 (260)
T 2agk_A 45 KLYKDRDVQGCHVIKLGP----N----NDDAAREALQESPQFLQVGGGIN-DT-NCLEWL-KWASKVIVTSWLFTKEGHF 113 (260)
T ss_dssp HHHHHTTCTTCEEEEESS----S----CHHHHHHHHHHSTTTSEEESSCC-TT-THHHHT-TTCSCEEECGGGBCTTCCB
T ss_pred HHHHHcCCCEEEEEeCCC----C----CHHHHHHHHhcCCceEEEeCCCC-HH-HHHHHh-cCCCEEEECcHHHhhcCCC
Confidence 333333446799999997 1 1223333 344589999966665 44 788888 999999888764 6
Q ss_pred -HHHHHHHHh
Q 024296 253 -EEEWRKLKS 261 (269)
Q Consensus 253 -~~l~~~l~~ 261 (269)
|++++.+.+
T Consensus 114 ~p~~~~~~~~ 123 (260)
T 2agk_A 114 QLKRLERLTE 123 (260)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 876655543
No 150
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=37.71 E-value=2.2e+02 Score=25.26 Aligned_cols=161 Identities=13% Similarity=0.052 Sum_probs=83.0
Q ss_pred CCHHHHHHHhHHHH---------Hhh-CCHHHHHHHHHHHHHHHHhcCCeEEEEecC-CCCcccCCC--CHHHHHHHHHH
Q 024296 52 RSLHEVFKLFDLIH---------VLT-TDHATVTRITQEVVEDFASENIVYLELRTT-PKRNESIGM--SKRSYMDAVVE 118 (269)
Q Consensus 52 ~~l~~f~~~f~~~~---------~l~-~~~~~~~~~~~~~~~~~~~dnV~Y~Elr~~-p~~~~~~g~--~~~~~~~~v~~ 118 (269)
.+++.|++...... ++. .+++++.+.+.. ++.++..|+-|+|+=++ |.......+ ++ +.+..+++
T Consensus 109 ~G~~~~~~~l~~~~~~~~~pvivsI~G~~~~d~~~~a~~-l~~~~~~g~d~ielNisCPn~~gg~~l~~~~-e~~~~il~ 186 (354)
T 4ef8_A 109 NGFDFYLAYAAEQHDYGKKPLFLSMSGLSMRENVEMCKR-LAAVATEKGVILELNLSCPNVPGKPQVAYDF-DAMRQCLT 186 (354)
T ss_dssp CCHHHHHHHHHHTCCTTTCCEEEEECCSSHHHHHHHHHH-HHHHHHHHCCEEEEECSSCCSTTSCCGGGSH-HHHHHHHH
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeccCCHHHHHHHHHH-HhhhhhcCCCEEEEeCCCCCCCCchhhccCH-HHHHHHHH
Confidence 45777766543211 222 467777665443 34444568999999986 654211112 22 34566666
Q ss_pred HHHhhhhccccccccccccccccccccccccccCCCCCCceEEEEEEEeCCCCHHHHHHHHHHHHhhC-CCceEE-----
Q 024296 119 GLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMR-DLGVVG----- 192 (269)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~~~R~~~~~~~~~~~~~a~~~~-~~~vvG----- 192 (269)
++++. ...++.+|+-. ..+.++..+.++.+.+.. -++|+.
T Consensus 187 av~~~------------------------------~~~PV~vKi~p----~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~ 232 (354)
T 4ef8_A 187 AVSEV------------------------------YPHSFGVKMPP----YFDFAHFDAAAEILNEFPKVQFITCINSIG 232 (354)
T ss_dssp HHHHH------------------------------CCSCEEEEECC----CCSHHHHHHHHHHHHTCTTEEEEEECCCEE
T ss_pred HHHHh------------------------------hCCCeEEEecC----CCCHHHHHHHHHHHHhCCCccEEEEecccC
Confidence 66543 12356666433 234544445555444442 233432
Q ss_pred ----EecCCCC--------CC---CCh--hhHHHHHHHHHHc--CCceeeecCCCCChhHHHHHHhcCCCcccccc
Q 024296 193 ----IDLSGNP--------TK---GEW--TTFLPALKFAREQ--GLQITLHCGEIPNKEEIQSMLDFLPQRIGHAC 249 (269)
Q Consensus 193 ----idl~G~E--------~~---~~~--~~f~~~f~~ar~~--gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~ 249 (269)
+|+-+.. .. +++ +.-..+...+++. .+++..= |-..+++.+.+++..|++-++=|.
T Consensus 233 ~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~-GGI~s~~da~~~l~aGAd~V~vgr 307 (354)
T 4ef8_A 233 NGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGC-GGVYTGEDAFLHVLAGASMVQVGT 307 (354)
T ss_dssp EEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEE-SCCCSHHHHHHHHHHTEEEEEECH
T ss_pred cceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEE-CCcCCHHHHHHHHHcCCCEEEEhH
Confidence 3432221 01 111 1122334444443 4777655 445678889998888988776554
No 151
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=37.21 E-value=2e+02 Score=24.82 Aligned_cols=41 Identities=12% Similarity=0.296 Sum_probs=25.8
Q ss_pred ChhhHHHHHHHHHHcCCceeeecC--CCCCh-hHHHHHHhcCCCcc
Q 024296 203 EWTTFLPALKFAREQGLQITLHCG--EIPNK-EEIQSMLDFLPQRI 245 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~gl~~t~HAG--E~~~~-e~i~~ai~l~a~RI 245 (269)
+...-..+...+ .++++|+|-. +..++ +.+...+++|.+||
T Consensus 140 D~~~~~~Li~~a--~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrI 183 (287)
T 3iwp_A 140 DKELCMSLMAIC--RPLPVTFHRAFDMVHDPMAALETLLTLGFERV 183 (287)
T ss_dssp CHHHHHHHHHHH--TTSCEEECGGGGGCSCHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHc--CCCcEEEECchhccCCHHHHHHHHHHcCCCEE
Confidence 334444444443 3799999965 33345 44556667899998
No 152
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=37.05 E-value=37 Score=31.15 Aligned_cols=98 Identities=11% Similarity=0.112 Sum_probs=53.3
Q ss_pred CCCCHHHHHHHHHHHHhhCCCceEEEecCCCCC---CCChhhHHHHHHHHHHcCCceeeecCCCCC--hhHHHHHHhc--
Q 024296 168 RRETTEAAMETVKLALEMRDLGVVGIDLSGNPT---KGEWTTFLPALKFAREQGLQITLHCGEIPN--KEEIQSMLDF-- 240 (269)
Q Consensus 168 R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~---~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~--~e~i~~ai~l-- 240 (269)
|..+.++..++.++..+....+++||...-.-. ..+..++..+++.+++.|..+..|+-.... .+.+.+++.+
T Consensus 159 ~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~~~~~a~~e~i~la~ 238 (480)
T 3gip_A 159 AAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAERRRLHTSHIRNEADGVEAAVEEVLAIGR 238 (480)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHHTTCEEEEECSCSSTTHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHHHHHHHHcCCEEEEEecCccccHHHHHHHHHHHHH
Confidence 334455554444444322233567765542111 124467888889999999999999954322 3455555543
Q ss_pred --CC-CcccccccCC-------H---HHHHHHHhCCCc
Q 024296 241 --LP-QRIGHACCFE-------E---EEWRKLKSSKIP 265 (269)
Q Consensus 241 --~a-~RIGHG~~~~-------~---~l~~~l~~~~I~ 265 (269)
|+ --|.|-.... + ++++..+++|+.
T Consensus 239 ~~g~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~G~~ 276 (480)
T 3gip_A 239 GTGCATVVSHHKCMMPQNWGRSRATLANIDRAREQGVE 276 (480)
T ss_dssp HHCCEEEETTCCCCSGGGTTTHHHHHHHHHHHHHTTCC
T ss_pred HhCCCEEEEEEeccCccchhhHHHHHHHHHHHHHcCCc
Confidence 32 2345543211 3 356666777644
No 153
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=36.32 E-value=16 Score=35.10 Aligned_cols=75 Identities=13% Similarity=0.214 Sum_probs=45.6
Q ss_pred ceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccccccC------C-HHHHHHHHh
Q 024296 189 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCF------E-EEEWRKLKS 261 (269)
Q Consensus 189 ~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~------~-~~l~~~l~~ 261 (269)
+++||.+.++. ..++..+..+++.|++.|+++.+|+........+.++++....|..|.++. + |++++.+.+
T Consensus 215 Ga~gfK~~~~~-~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Vedalea~~Gr~ih~~HiEgag~~hapd~i~~~~~ 293 (570)
T 4ac7_C 215 GAAGLKIHEDW-GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMAGH 293 (570)
T ss_dssp TCCEEEEEGGG-CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGGGS
T ss_pred CCCeEeeccCC-CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHHHHHHHhCCCcceeEeeeccccccChHHHHHhcc
Confidence 57777665422 235677889999999999999999985432223444444212344454432 2 666666655
Q ss_pred CCC
Q 024296 262 SKI 264 (269)
Q Consensus 262 ~~I 264 (269)
.+|
T Consensus 294 ~~v 296 (570)
T 4ac7_C 294 PNV 296 (570)
T ss_dssp TTE
T ss_pred CCc
Confidence 443
No 154
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=36.32 E-value=16 Score=35.10 Aligned_cols=75 Identities=13% Similarity=0.214 Sum_probs=45.8
Q ss_pred ceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccccccC------C-HHHHHHHHh
Q 024296 189 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCF------E-EEEWRKLKS 261 (269)
Q Consensus 189 ~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~------~-~~l~~~l~~ 261 (269)
+++||.+.++. ..++..+..+++.|++.|+++.+|+........+.++++....|..|.++. + |++++.+.+
T Consensus 215 Ga~gfK~~~~~-~~~~~~L~~aL~~A~~~g~~V~iHae~l~e~g~Vedalea~~Gr~ih~~HiEgag~~hapd~i~~~~~ 293 (570)
T 4ubp_C 215 GAAGLKIHEDW-GATPASIDRSLTVADEADVQVAIHSDTLNEAGFLEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMAGH 293 (570)
T ss_dssp TCCEEEEEGGG-CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGGGS
T ss_pred CCCeEeeccCC-CCCHHHHHHHHHHHHHcCCEEEEEcCCcchhhHHHHHHHHhCCCceeEEEecccccccChHHHHHhcc
Confidence 57777665422 235677889999999999999999985432223444444212444554432 2 666666655
Q ss_pred CCC
Q 024296 262 SKI 264 (269)
Q Consensus 262 ~~I 264 (269)
.+|
T Consensus 294 ~~v 296 (570)
T 4ubp_C 294 PNV 296 (570)
T ss_dssp TTE
T ss_pred CCc
Confidence 443
No 155
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=36.27 E-value=3.9e+02 Score=27.73 Aligned_cols=77 Identities=16% Similarity=0.003 Sum_probs=57.5
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc-CCceeeecCCCCCh--hHHHHHHhcCCCccc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPNK--EEIQSMLDFLPQRIG 246 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-gl~~t~HAGE~~~~--e~i~~ai~l~a~RIG 246 (269)
.+++...++++.+.+...+.+.=-|.+|-= .|.....+++.+++. ++++-+|+--+.|- -|...|++.|+++|.
T Consensus 689 ~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~---~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD 765 (1150)
T 3hbl_A 689 YTLEYYVKLAKELEREGFHILAIKDMAGLL---KPKAAYELIGELKSAVDLPIHLHTHDTSGNGLLTYKQAIDAGVDIID 765 (1150)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEETTCCC---CHHHHHHHHHHHHHHCCSCEEEEECBTTSCHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeeeEcCccCCC---CHHHHHHHHHHHHHhcCCeEEEEeCCCCcHHHHHHHHHHHhCCCEEE
Confidence 456667777777777766656666888754 366777777777665 89999999988763 678899999999987
Q ss_pred ccc
Q 024296 247 HAC 249 (269)
Q Consensus 247 HG~ 249 (269)
=.+
T Consensus 766 ~ai 768 (1150)
T 3hbl_A 766 TAV 768 (1150)
T ss_dssp EBC
T ss_pred Eec
Confidence 554
No 156
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=36.00 E-value=55 Score=28.80 Aligned_cols=69 Identities=14% Similarity=-0.035 Sum_probs=48.0
Q ss_pred eEEEecCCCCCCCChhhHHHHHHHHHHc-CCceeeecCCCCC--hhHHHHHHhcCCCccccccc-----C----CHHHHH
Q 024296 190 VVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPN--KEEIQSMLDFLPQRIGHACC-----F----EEEEWR 257 (269)
Q Consensus 190 vvGidl~G~E~~~~~~~f~~~f~~ar~~-gl~~t~HAGE~~~--~e~i~~ai~l~a~RIGHG~~-----~----~~~l~~ 257 (269)
|.=-|.+|-- .|.....+++.+++. ++++.+|+--+.+ ..|...|++.|+++|.=.+. . .++++.
T Consensus 160 i~l~Dt~G~~---~P~~~~~lv~~l~~~~~~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~GlG~~~GN~~~E~lv~ 236 (320)
T 3dxi_A 160 FCMVDSFGGI---TPKEVKNLLKEVRKYTHVPVGFHGHDNLQLGLINSITAIDDGIDFIDATITGMGRGAGNLKMELLLT 236 (320)
T ss_dssp EEEECTTSCC---CHHHHHHHHHHHHHHCCSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSSTTCBCBHHHHHH
T ss_pred EEECcccCCC---CHHHHHHHHHHHHHhCCCeEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccccCCcccchhHHHHHH
Confidence 4444666643 567777888877765 7999999988775 36778899999999864432 1 245666
Q ss_pred HHHh
Q 024296 258 KLKS 261 (269)
Q Consensus 258 ~l~~ 261 (269)
.|..
T Consensus 237 ~L~~ 240 (320)
T 3dxi_A 237 YLNK 240 (320)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6655
No 157
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=35.53 E-value=1.5e+02 Score=25.57 Aligned_cols=76 Identities=13% Similarity=0.083 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~a~ 243 (269)
.+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+. .|-+.|++
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGAD 113 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCC
Confidence 456667777777666433344444444433234567788888877653 499999999877666553 45557776
Q ss_pred cc
Q 024296 244 RI 245 (269)
Q Consensus 244 RI 245 (269)
-+
T Consensus 114 av 115 (304)
T 3cpr_A 114 GL 115 (304)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 158
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=35.34 E-value=1.1e+02 Score=25.85 Aligned_cols=20 Identities=15% Similarity=0.054 Sum_probs=16.7
Q ss_pred HHHHHHHHhcCCeEEEEecC
Q 024296 79 QEVVEDFASENIVYLELRTT 98 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr~~ 98 (269)
.+.++.+++-|..++|+...
T Consensus 32 ~~~l~~~a~~G~~~VEl~~~ 51 (303)
T 3l23_A 32 AANLRKVKDMGYSKLELAGY 51 (303)
T ss_dssp HHHHHHHHHTTCCEEEECCE
T ss_pred HHHHHHHHHcCCCEEEeccc
Confidence 56778889999999999853
No 159
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=34.99 E-value=1e+02 Score=26.29 Aligned_cols=77 Identities=13% Similarity=0.105 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~a~ 243 (269)
.+.+...+.++...+..-++++..+..|.=..-+.++...+++.+.+. .+++.+|+|..+..+.+. .|-+.|++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGAD 98 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 456667777777766544455555555432233567778888877663 599999999877666553 44556776
Q ss_pred ccc
Q 024296 244 RIG 246 (269)
Q Consensus 244 RIG 246 (269)
-+-
T Consensus 99 avl 101 (291)
T 3tak_A 99 AAL 101 (291)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 160
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=34.96 E-value=98 Score=26.82 Aligned_cols=77 Identities=4% Similarity=-0.104 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHH---HHHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i---~~ai~l~a~ 243 (269)
.+.+...+.++..++..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+ +.|-+.|++
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 105 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAA 105 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCC
Confidence 456677777777776544556655555533334567788888877663 59999999987766655 345557876
Q ss_pred ccc
Q 024296 244 RIG 246 (269)
Q Consensus 244 RIG 246 (269)
-+-
T Consensus 106 avl 108 (309)
T 3fkr_A 106 MVM 108 (309)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 161
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=34.84 E-value=75 Score=25.21 Aligned_cols=96 Identities=17% Similarity=0.090 Sum_probs=54.7
Q ss_pred EEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc--CCceeeecCCCCC-hhH-HHH
Q 024296 161 RLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ--GLQITLHCGEIPN-KEE-IQS 236 (269)
Q Consensus 161 rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~--gl~~t~HAGE~~~-~e~-i~~ 236 (269)
++|++++ ..+.+.+.+.++.+.. ++..+.+ |.+.. ...=.+..+..++. ++++.+|.+ ..+ ++. +..
T Consensus 2 ~li~a~d-~~~~~~~~~~~~~~~~----~v~~iev-~~~~~--~~~g~~~i~~l~~~~~~~~i~~~l~-~~di~~~~~~~ 72 (207)
T 3ajx_A 2 KLQVAID-LLSTEAALELAGKVAE----YVDIIEL-GTPLI--KAEGLSVITAVKKAHPDKIVFADMK-TMDAGELEADI 72 (207)
T ss_dssp EEEEEEC-CSCHHHHHHHHHHHGG----GCSEEEE-CHHHH--HHHCTHHHHHHHHHSTTSEEEEEEE-ECSCHHHHHHH
T ss_pred eEEEEeC-CCCHHHHHHHHHHhhc----cCCEEEE-CcHHH--HhhCHHHHHHHHHhCCCCeEEEEEE-ecCccHHHHHH
Confidence 5777775 3456666666665533 2333444 22110 01112245555555 789999988 445 555 566
Q ss_pred HHhcCCCccc-ccccCC---HHHHHHHHhCCCc
Q 024296 237 MLDFLPQRIG-HACCFE---EEEWRKLKSSKIP 265 (269)
Q Consensus 237 ai~l~a~RIG-HG~~~~---~~l~~~l~~~~I~ 265 (269)
+.++|++-|- |+..-+ ..+.+.+++.++.
T Consensus 73 a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~ 105 (207)
T 3ajx_A 73 AFKAGADLVTVLGSADDSTIAGAVKAAQAHNKG 105 (207)
T ss_dssp HHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE
T ss_pred HHhCCCCEEEEeccCChHHHHHHHHHHHHcCCc
Confidence 7778999887 775432 2456666665544
No 162
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=34.73 E-value=1.9e+02 Score=23.76 Aligned_cols=21 Identities=19% Similarity=0.200 Sum_probs=17.2
Q ss_pred HHHHHHHHHhcCCeEEEEecC
Q 024296 78 TQEVVEDFASENIVYLELRTT 98 (269)
Q Consensus 78 ~~~~~~~~~~dnV~Y~Elr~~ 98 (269)
+.+.++.+++-|..++|++..
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~ 39 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAAS 39 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEEST
T ss_pred HHHHHHHHHHcCCCEEEecCc
Confidence 356778888899999999865
No 163
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=34.57 E-value=20 Score=31.39 Aligned_cols=27 Identities=33% Similarity=0.486 Sum_probs=22.4
Q ss_pred cchhcccc---CCCCCHHHHHHHHHHhccCCCc
Q 024296 9 KVELHAHL---NGSIRDSTLLELARVLGEKGVI 38 (269)
Q Consensus 9 K~eLH~HL---~Gs~~~~tl~~la~~~~~~g~~ 38 (269)
++|||+|- +|+.+|+.+.+.|++ .|+.
T Consensus 14 ~~DLH~Hs~~SDG~~~~~elv~~A~~---~Gl~ 43 (301)
T 3o0f_A 14 GWDIHCHTVFSDGTETPRTLVEQARK---LGLH 43 (301)
T ss_dssp SEEEEECCTTTTCSSCHHHHHHHHHH---TTCS
T ss_pred eEEeeECCCCCCCCCCHHHHHHHHHH---cCCC
Confidence 58999997 588999999999985 5654
No 164
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=34.21 E-value=45 Score=28.98 Aligned_cols=96 Identities=10% Similarity=0.073 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHH-HHH--HcCCceeeecCCCCChhHHHHHHhcCCCcccc
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALK-FAR--EQGLQITLHCGEIPNKEEIQSMLDFLPQRIGH 247 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~-~ar--~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGH 247 (269)
+.+.+..+++.|.+.+.+.|+.+.-.+.........+..+.+ .|+ +.++|+.+|.--..+.+.+..|++.|-+ .|
T Consensus 30 n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GFt--SV 107 (288)
T 3q94_A 30 NLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFT--SV 107 (288)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTCS--EE
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCCC--eE
Confidence 578899999999998888888775332222112334555554 455 5799999998665578889999886521 12
Q ss_pred cccC---C--------HHHHHHHHhCCCceee
Q 024296 248 ACCF---E--------EEEWRKLKSSKIPVRI 268 (269)
Q Consensus 248 G~~~---~--------~~l~~~l~~~~I~lEi 268 (269)
-+.. . .+++++....|+.+|.
T Consensus 108 MiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEa 139 (288)
T 3q94_A 108 MIDASHHPFEENVETTKKVVEYAHARNVSVEA 139 (288)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 2221 1 1478899999999984
No 165
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=34.11 E-value=2.8e+02 Score=25.54 Aligned_cols=93 Identities=14% Similarity=0.059 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecC-CCC---ChhHH----HHHHhcCC
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG-EIP---NKEEI----QSMLDFLP 242 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAG-E~~---~~e~i----~~ai~l~a 242 (269)
+.+.....++.+.+..-+.|.-|+ +-++ .....+..+.|++.|..+.+..+ +.+ +++.+ ..+.+.|+
T Consensus 98 ~ddv~~~~v~~a~~~Gvd~i~if~-~~sd----~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Ga 172 (464)
T 2nx9_A 98 ADDVVDTFVERAVKNGMDVFRVFD-AMND----VRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGV 172 (464)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECC-TTCC----THHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTC
T ss_pred cchhhHHHHHHHHhCCcCEEEEEE-ecCH----HHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCC
Confidence 344456667777665444333332 2222 35677888999999987754432 222 34433 34556899
Q ss_pred Cccccccc---CCH----HHHHHHHhC-CCceee
Q 024296 243 QRIGHACC---FEE----EEWRKLKSS-KIPVRI 268 (269)
Q Consensus 243 ~RIGHG~~---~~~----~l~~~l~~~-~I~lEi 268 (269)
++|.=.=. +.| ++++.++++ +++|++
T Consensus 173 d~I~l~DT~G~~~P~~v~~lv~~l~~~~~~~i~~ 206 (464)
T 2nx9_A 173 DSIALKDMAGILTPYAAEELVSTLKKQVDVELHL 206 (464)
T ss_dssp SEEEEEETTSCCCHHHHHHHHHHHHHHCCSCEEE
T ss_pred CEEEEcCCCCCcCHHHHHHHHHHHHHhcCCeEEE
Confidence 98865511 244 456666553 455543
No 166
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=34.06 E-value=1.6e+02 Score=23.95 Aligned_cols=63 Identities=10% Similarity=-0.076 Sum_probs=37.7
Q ss_pred CceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecC
Q 024296 157 KIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG 226 (269)
Q Consensus 157 ~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAG 226 (269)
|..+.+..+..-..+++...+.++.+...+.++++-+ +.. .....+.++.+++.|+|+.+--.
T Consensus 40 g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~---~~~----~~~~~~~~~~~~~~~iPvV~~~~ 102 (304)
T 3gbv_A 40 DFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFA---PTV----PQYTKGFTDALNELGIPYIYIDS 102 (304)
T ss_dssp GGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEEC---CSS----GGGTHHHHHHHHHHTCCEEEESS
T ss_pred hCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEEC---CCC----hHHHHHHHHHHHHCCCeEEEEeC
Confidence 4445555544444566666667777666555555544 221 23356678888888999876543
No 167
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=33.92 E-value=1.1e+02 Score=26.47 Aligned_cols=76 Identities=12% Similarity=0.046 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHH---HHHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i---~~ai~l~a~ 243 (269)
.+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+ +.|-+.|++
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 112 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAH 112 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 456667777777766433444444444432233567778888777663 59999999987766555 344456775
Q ss_pred cc
Q 024296 244 RI 245 (269)
Q Consensus 244 RI 245 (269)
-+
T Consensus 113 av 114 (304)
T 3l21_A 113 GL 114 (304)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 168
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=33.90 E-value=24 Score=30.09 Aligned_cols=29 Identities=24% Similarity=0.571 Sum_probs=19.0
Q ss_pred chhcccc-----CCCCCHHHHHHHHHHhccCCCc
Q 024296 10 VELHAHL-----NGSIRDSTLLELARVLGEKGVI 38 (269)
Q Consensus 10 ~eLH~HL-----~Gs~~~~tl~~la~~~~~~g~~ 38 (269)
+|+|+|. +|+.+++..+++++...+.|+.
T Consensus 2 ~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~ 35 (262)
T 3qy7_A 2 IDIHCHILPAMDDGAGDSADSIEMARAAVRQGIR 35 (262)
T ss_dssp EESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCC
T ss_pred EEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 6899999 5899999744443332246653
No 169
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=33.79 E-value=99 Score=25.73 Aligned_cols=73 Identities=16% Similarity=0.230 Sum_probs=50.6
Q ss_pred CCCceEEEecCCCCCCCChhhHHHHHH-HHHHcCCceeeecCCCCChhHHHHHHhcCCCcccccccC--CHHHHHHHHh
Q 024296 186 RDLGVVGIDLSGNPTKGEWTTFLPALK-FAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCF--EEEEWRKLKS 261 (269)
Q Consensus 186 ~~~~vvGidl~G~E~~~~~~~f~~~f~-~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~--~~~l~~~l~~ 261 (269)
.-+.++=+||.|...+. ....++.+ .+++.++|+++=.|= .+.+.+...+..|++|+-=|..+ +|++++.+.+
T Consensus 44 gad~lhvvDld~a~~~~--~~~~~~i~~i~~~~~~pl~vGGGI-rs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~ 119 (243)
T 4gj1_A 44 GAKELHLVDLTGAKDPS--KRQFALIEKLAKEVSVNLQVGGGI-RSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILK 119 (243)
T ss_dssp TCCEEEEEEHHHHHCGG--GCCHHHHHHHHHHCCSEEEEESSC-CCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHH
T ss_pred CCCEEEEEecCcccccc--hhHHHHHHHHHHhcCCCeEecccc-ccHHHHHHHHHcCCCEEEEccccccCCchHHHHHh
Confidence 44679999998754322 22333443 455678999998776 45788999999999999888765 6887654443
No 170
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=33.72 E-value=1e+02 Score=26.45 Aligned_cols=73 Identities=12% Similarity=0.172 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCC--CC-CCChhhHHHHHHHHHHc---CCceeeecCCCCChhHH---HHHHhc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGN--PT-KGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDF 240 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~--E~-~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i---~~ai~l 240 (269)
.+.+...+.++...+. ++.|+=+.|. |. .-+.++...+++.+.+. .+++.+++|..+..+.+ +.|-+.
T Consensus 18 iD~~~l~~lv~~li~~---Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~ 94 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDN---GTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEV 94 (294)
T ss_dssp ECHHHHHHHHHHHHTT---TCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHC---CCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 4566666777766653 4555544443 33 23557788888877663 49999999987766655 344556
Q ss_pred CCCcc
Q 024296 241 LPQRI 245 (269)
Q Consensus 241 ~a~RI 245 (269)
|++=+
T Consensus 95 Gadav 99 (294)
T 2ehh_A 95 GADGA 99 (294)
T ss_dssp TCSEE
T ss_pred CCCEE
Confidence 77644
No 171
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=33.68 E-value=1.2e+02 Score=25.99 Aligned_cols=77 Identities=10% Similarity=0.059 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~a~ 243 (269)
.+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+|+|..+..+.+. .|-+.|++
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 356666777776665433344444444322223557777888777653 599999999877665553 45557776
Q ss_pred ccc
Q 024296 244 RIG 246 (269)
Q Consensus 244 RIG 246 (269)
-+-
T Consensus 105 avl 107 (297)
T 3flu_A 105 YTL 107 (297)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 172
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=33.58 E-value=2.4e+02 Score=24.59 Aligned_cols=71 Identities=7% Similarity=-0.085 Sum_probs=38.6
Q ss_pred EEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHH-cCCceeeecCCCC-ChhHHHHH
Q 024296 160 VRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFARE-QGLQITLHCGEIP-NKEEIQSM 237 (269)
Q Consensus 160 ~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~-~gl~~t~HAGE~~-~~e~i~~a 237 (269)
+.+.+.++..++++++.+.++...++.-.++ |...++.++ +.++..++ .++|+ =+||.. +++....+
T Consensus 185 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--------EqP~~~~d~-~~~~~l~~~~~iPI--a~dE~~~~~~~~~~~ 253 (356)
T 3ro6_B 185 AVVRVDPNQSYDRDGLLRLDRLVQELGIEFI--------EQPFPAGRT-DWLRALPKAIRRRI--AADESLLGPADAFAL 253 (356)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHHHTTCCCE--------ECCSCTTCH-HHHHTSCHHHHHTE--EESTTCCSHHHHHHH
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHhcCCCEE--------ECCCCCCcH-HHHHHHHhcCCCCE--EeCCcCCCHHHHHHH
Confidence 4566788888888887777766655432222 444333333 23333333 35554 457764 45556666
Q ss_pred HhcC
Q 024296 238 LDFL 241 (269)
Q Consensus 238 i~l~ 241 (269)
+..+
T Consensus 254 ~~~~ 257 (356)
T 3ro6_B 254 AAPP 257 (356)
T ss_dssp HSSS
T ss_pred HhcC
Confidence 5533
No 173
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=33.57 E-value=1.6e+02 Score=26.65 Aligned_cols=59 Identities=8% Similarity=0.038 Sum_probs=37.4
Q ss_pred ChhhHHHHHHHHHHcCCceeeecCCCCC--hhHHHHH----HhcCCC-ccccccc-------CCHHHHHHHHh
Q 024296 203 EWTTFLPALKFAREQGLQITLHCGEIPN--KEEIQSM----LDFLPQ-RIGHACC-------FEEEEWRKLKS 261 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~gl~~t~HAGE~~~--~e~i~~a----i~l~a~-RIGHG~~-------~~~~l~~~l~~ 261 (269)
...++..+++.+++.|.++.+|+..... .+.+.++ .+.|.. .|.|... ..+++++++.+
T Consensus 212 ~~~el~~~~~~a~~~g~~v~~H~~~~~~~~~~~l~~~~~~a~~~g~~v~i~H~~~~~~~~~g~~~~~~~~l~~ 284 (496)
T 1rk6_A 212 STEEIIEVCRPLITHGGVYATHMRDEGEHIVQALEETFRIGRELDVPVVISHHKVMGKLNFGRSKETLALIEA 284 (496)
T ss_dssp CHHHHHHHHTHHHHHTCEEEEECSCSSTTHHHHHHHHHHHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeCCCcccHHHHHHHHHHHHHHcCCeEEEEEEeccCCcchhhHHHHHHHHHH
Confidence 4467778888888889999999963221 2344433 345765 5788843 23555555554
No 174
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=33.46 E-value=1.8e+02 Score=24.45 Aligned_cols=46 Identities=9% Similarity=0.078 Sum_probs=31.7
Q ss_pred HHHHHHHHc-CCceeeecCCCCChhHHHHHHhcCCCcccccccC--CHHH
Q 024296 209 PALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCF--EEEE 255 (269)
Q Consensus 209 ~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~--~~~l 255 (269)
+..+.+++. ++++.+ +|=..+++++.+++..|++-++=|..+ +|++
T Consensus 231 ~~i~~i~~~~~ipvia-~GGI~~~~d~~~~l~~GAd~V~vg~~~l~~p~~ 279 (311)
T 1ep3_A 231 KLIHQVAQDVDIPIIG-MGGVANAQDVLEMYMAGASAVAVGTANFADPFV 279 (311)
T ss_dssp HHHHHHHTTCSSCEEE-CSSCCSHHHHHHHHHHTCSEEEECTHHHHCTTH
T ss_pred HHHHHHHHhcCCCEEE-ECCcCCHHHHHHHHHcCCCEEEECHHHHcCcHH
Confidence 455555554 788765 555567899999999999998766543 5543
No 175
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=33.37 E-value=98 Score=26.64 Aligned_cols=73 Identities=12% Similarity=0.135 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCC--CC-CCChhhHHHHHHHHHHc----CCceeeecCCCCChhHHH---HHHh
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGN--PT-KGEWTTFLPALKFAREQ----GLQITLHCGEIPNKEEIQ---SMLD 239 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~--E~-~~~~~~f~~~f~~ar~~----gl~~t~HAGE~~~~e~i~---~ai~ 239 (269)
.+.+...+.++...+. ++-|+=+.|. |. .-+.++...+++.+.+. .+++.+++|..+..+.+. .|-+
T Consensus 25 iD~~~l~~lv~~li~~---Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~ 101 (301)
T 3m5v_A 25 VDEQSYARLIKRQIEN---GIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKE 101 (301)
T ss_dssp ECHHHHHHHHHHHHHT---TCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc---CCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHH
Confidence 3566667777766653 5666655553 32 23557777888777663 499999999877665553 4545
Q ss_pred cCCCcc
Q 024296 240 FLPQRI 245 (269)
Q Consensus 240 l~a~RI 245 (269)
.|++-+
T Consensus 102 ~Gadav 107 (301)
T 3m5v_A 102 HGADGI 107 (301)
T ss_dssp TTCSEE
T ss_pred cCCCEE
Confidence 677544
No 176
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=33.22 E-value=47 Score=27.08 Aligned_cols=29 Identities=7% Similarity=-0.060 Sum_probs=16.6
Q ss_pred CCCcccccccC------CHHHHHHHHhCCCceeeC
Q 024296 241 LPQRIGHACCF------EEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 241 ~a~RIGHG~~~------~~~l~~~l~~~~I~lEic 269 (269)
.++=|+|--.. +..+.+..+++++.||||
T Consensus 96 ~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv~lEIn 130 (212)
T 1v77_A 96 GVDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFS 130 (212)
T ss_dssp TCSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEE
T ss_pred CCCEEecccccccCCCCCHHHHHHHHHCCeEEEEE
Confidence 55555554322 345666666667776664
No 177
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=33.01 E-value=79 Score=25.90 Aligned_cols=20 Identities=5% Similarity=0.014 Sum_probs=16.3
Q ss_pred HHHHHHHHhcCCeEEEEecC
Q 024296 79 QEVVEDFASENIVYLELRTT 98 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr~~ 98 (269)
.+.++.+++-|..++|++..
T Consensus 19 ~~~l~~~~~~G~~~vEl~~~ 38 (281)
T 3u0h_A 19 VLYLDLARETGYRYVDVPFH 38 (281)
T ss_dssp HHHHHHHHHTTCSEECCCHH
T ss_pred HHHHHHHHHcCCCEEEecHH
Confidence 56777788899999999864
No 178
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=32.98 E-value=2.1e+02 Score=23.64 Aligned_cols=104 Identities=8% Similarity=0.050 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCC
Q 024296 78 TQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKK 157 (269)
Q Consensus 78 ~~~~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (269)
+..+.+.+.+-|+..+|+-++.. ...+.++.+.+.+...
T Consensus 27 a~~~a~al~~gGi~~iEvt~~t~-------~a~~~I~~l~~~~p~~---------------------------------- 65 (217)
T 3lab_A 27 AIPMAKALVAGGVHLLEVTLRTE-------AGLAAISAIKKAVPEA---------------------------------- 65 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEETTST-------THHHHHHHHHHHCTTS----------------------------------
T ss_pred HHHHHHHHHHcCCCEEEEeCCCc-------cHHHHHHHHHHHCCCC----------------------------------
Q ss_pred ceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCC------ceeeecCCCCCh
Q 024296 158 IYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGL------QITLHCGEIPNK 231 (269)
Q Consensus 158 i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl------~~t~HAGE~~~~ 231 (269)
++..---.+++++...++ +|.+.--+|..-.++.+.|++.|+ ++..=+ .++
T Consensus 66 -----~IGAGTVlt~~~a~~ai~---------------AGA~fivsP~~~~evi~~~~~~~v~~~~~~~~~PG~---~Tp 122 (217)
T 3lab_A 66 -----IVGAGTVCTADDFQKAID---------------AGAQFIVSPGLTPELIEKAKQVKLDGQWQGVFLPGV---ATA 122 (217)
T ss_dssp -----EEEEECCCSHHHHHHHHH---------------HTCSEEEESSCCHHHHHHHHHHHHHCSCCCEEEEEE---CSH
T ss_pred -----eEeeccccCHHHHHHHHH---------------cCCCEEEeCCCcHHHHHHHHHcCCCccCCCeEeCCC---CCH
Q ss_pred hHHHHHHhcCCCcc
Q 024296 232 EEIQSMLDFLPQRI 245 (269)
Q Consensus 232 e~i~~ai~l~a~RI 245 (269)
+++..|+++|++-|
T Consensus 123 tE~~~A~~~Gad~v 136 (217)
T 3lab_A 123 SEVMIAAQAGITQL 136 (217)
T ss_dssp HHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCEE
No 179
>2zjr_W 50S ribosomal protein L30; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.59.1.1 PDB: 1nwx_X* 1nwy_X* 1pnu_X 1pny_X 1sm1_X* 1vor_Z 1vou_Z 1vow_Z 1voy_Z 1vp0_Z 1xbp_X* 2zjp_W* 2zjq_W 1nkw_X 3cf5_W* 3dll_W* 3pio_W* 3pip_W*
Probab=32.82 E-value=71 Score=20.47 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=31.7
Q ss_pred CceeeecCCCCChhHHHHHHh-cCCCcccccccC--CHHHHHHHH
Q 024296 219 LQITLHCGEIPNKEEIQSMLD-FLPQRIGHACCF--EEEEWRKLK 260 (269)
Q Consensus 219 l~~t~HAGE~~~~e~i~~ai~-l~a~RIGHG~~~--~~~l~~~l~ 260 (269)
+++|.--|-.+.++..++.+. ||-.||+|-+-. .|...-++.
T Consensus 1 ~kIt~vrS~ig~~~~~r~tl~~LGL~k~~~~v~~~dtp~irGMI~ 45 (55)
T 2zjr_W 1 MKIKLVRSVIGRPGNQVKTVQALGLRKIGDSREVSDTPAVRGMVK 45 (55)
T ss_dssp CEEEBCSCSTTSCHHHHHHHHHTTCCSTTCEEECCCSHHHHHHHH
T ss_pred CEEEEEecCCCCCHHHHHHHHHhCCCCCCCEEEecCCHHHHHHHH
Confidence 456666777777888999888 899999999865 477555544
No 180
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=32.40 E-value=2e+02 Score=23.24 Aligned_cols=18 Identities=22% Similarity=0.287 Sum_probs=15.2
Q ss_pred HHHHHHHHhcCCeEEEEe
Q 024296 79 QEVVEDFASENIVYLELR 96 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr 96 (269)
.+.++.+++-|..++|++
T Consensus 17 ~~~l~~~~~~G~~~vEl~ 34 (278)
T 1i60_A 17 KLDLELCEKHGYDYIEIR 34 (278)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhCCCEEEEc
Confidence 566777888899999998
No 181
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=32.34 E-value=1.3e+02 Score=25.81 Aligned_cols=73 Identities=8% Similarity=0.075 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCC--CC-CCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGN--PT-KGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDF 240 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~--E~-~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l 240 (269)
.+.+...+.++...+. ++-|+=+.|. |. .-+.++...+++.+.+. .+++.+++|..+..+.+. .|-+.
T Consensus 30 iD~~~l~~lv~~li~~---Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~ 106 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDN---GTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEV 106 (301)
T ss_dssp BCHHHHHHHHHHHHHT---TCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHc---CCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhc
Confidence 4566667777766654 4555544442 33 23567788888877653 599999999877666553 44456
Q ss_pred CCCcc
Q 024296 241 LPQRI 245 (269)
Q Consensus 241 ~a~RI 245 (269)
|++=+
T Consensus 107 Gadav 111 (301)
T 1xky_A 107 GVDAV 111 (301)
T ss_dssp TCSEE
T ss_pred CCCEE
Confidence 77644
No 182
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=32.20 E-value=26 Score=36.13 Aligned_cols=26 Identities=31% Similarity=0.460 Sum_probs=22.5
Q ss_pred CCcchhccc-----cCCCCCHHHHHHHHHHh
Q 024296 7 MPKVELHAH-----LNGSIRDSTLLELARVL 32 (269)
Q Consensus 7 lPK~eLH~H-----L~Gs~~~~tl~~la~~~ 32 (269)
++++|||+| ++|+.+++.+.+.|++.
T Consensus 114 ~~~vdLH~HT~~S~lDG~~~~~eLv~~A~~~ 144 (1041)
T 3f2b_A 114 EKRVELHLHTPMSQMDAVTSVTKLIEQAKKW 144 (1041)
T ss_dssp SCCCBCCBCCTTSTTTCCSCHHHHHHHHHHT
T ss_pred cceEEcccCCcCccccccCCHHHHHHHHHHC
Confidence 567999999 68889999999999963
No 183
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=32.12 E-value=28 Score=26.31 Aligned_cols=39 Identities=23% Similarity=0.222 Sum_probs=26.1
Q ss_pred ChhHHHHHHhcC--CCc--cccccc---CCHHHHHHHHhCCCceee
Q 024296 230 NKEEIQSMLDFL--PQR--IGHACC---FEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 230 ~~e~i~~ai~l~--a~R--IGHG~~---~~~~l~~~l~~~~I~lEi 268 (269)
+++++...+.+. ++= ||-|-. ++|++.+.++++||.+|+
T Consensus 55 ~~~~l~~l~~~~p~pevliiGtG~~~~~l~p~~~~~l~~~GI~vE~ 100 (128)
T 2fi9_A 55 TQEDISRVLEESDQIEVLLIGTGVELLRLPEELRVLLWEKRISSDT 100 (128)
T ss_dssp CTGGGHHHHHTGGGCSEEEEECTTSCCCCCHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHhcCCCCCEEEECCCCCCCCCCHHHHHHHHHcCCEEEE
Confidence 455555544443 332 456643 478999999999999996
No 184
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=31.96 E-value=21 Score=34.01 Aligned_cols=75 Identities=12% Similarity=0.104 Sum_probs=47.3
Q ss_pred ceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHH--hcC-CCcccccccCC----HHHHHHHHh
Q 024296 189 GVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSML--DFL-PQRIGHACCFE----EEEWRKLKS 261 (269)
Q Consensus 189 ~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai--~l~-a~RIGHG~~~~----~~l~~~l~~ 261 (269)
+.+||.+.... ..+++.+..+++.|++.|+++.+|+-+......+.+++ ..| ..+|-|..... +++++.+++
T Consensus 214 Ga~gik~~~~~-~~t~e~l~~~l~~A~~~g~~V~iHa~~~~e~g~~~~~la~~~g~~~hi~H~~~~~~~~~~d~I~~~~~ 292 (569)
T 1e9y_B 214 GAIGFKIHEDW-GTTPSAINHALDVADKYDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGE 292 (569)
T ss_dssp TCSEEEECGGG-CCCHHHHHHHHHHHHHTTCEEEECCCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSCSTTTGGGGGGS
T ss_pred CCCEEEecCCC-CCCHHHHHHHHHHHHHhCCEEEEEcCCcccchHHHHHHHHHcCCCEEEEEcccCcccccHHHHHHHHH
Confidence 45566654321 23567788899999999999999997532211233322 234 23445554332 788999999
Q ss_pred CCC
Q 024296 262 SKI 264 (269)
Q Consensus 262 ~~I 264 (269)
+++
T Consensus 293 ~gv 295 (569)
T 1e9y_B 293 HNI 295 (569)
T ss_dssp TTE
T ss_pred cCC
Confidence 986
No 185
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=31.87 E-value=1.1e+02 Score=26.23 Aligned_cols=77 Identities=13% Similarity=0.150 Sum_probs=46.8
Q ss_pred CCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcCC
Q 024296 169 RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFLP 242 (269)
Q Consensus 169 ~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~a 242 (269)
..+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+. .|-+.|+
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 17 EVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCC
Confidence 3456666777777666433334444444322223567788888877653 499999999876665553 4445677
Q ss_pred Ccc
Q 024296 243 QRI 245 (269)
Q Consensus 243 ~RI 245 (269)
+-+
T Consensus 97 dav 99 (289)
T 2yxg_A 97 DAV 99 (289)
T ss_dssp SEE
T ss_pred CEE
Confidence 644
No 186
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=31.12 E-value=1.2e+02 Score=26.35 Aligned_cols=76 Identities=9% Similarity=0.122 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~a~ 243 (269)
.+.+...+.++..++..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+. .|-+.|++
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 356667777777766544445555544432333567777887776653 599999999977666553 45557776
Q ss_pred cc
Q 024296 244 RI 245 (269)
Q Consensus 244 RI 245 (269)
-+
T Consensus 121 av 122 (314)
T 3qze_A 121 AC 122 (314)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 187
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=31.02 E-value=1.2e+02 Score=26.13 Aligned_cols=76 Identities=12% Similarity=0.099 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHH---HHHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i---~~ai~l~a~ 243 (269)
.+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+ +.|-+.|++
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCC
Confidence 456666777777666433344444444322223567777888777653 59999999987766555 344456776
Q ss_pred cc
Q 024296 244 RI 245 (269)
Q Consensus 244 RI 245 (269)
=+
T Consensus 109 av 110 (303)
T 2wkj_A 109 AV 110 (303)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 188
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=30.85 E-value=91 Score=27.17 Aligned_cols=66 Identities=12% Similarity=0.257 Sum_probs=42.1
Q ss_pred ChhhHHHHHHHHHHcCCceeeecCCCCCh------hH--HHHHH-----hcCCCcccccccC-CHHHHHHHHhC--CCce
Q 024296 203 EWTTFLPALKFAREQGLQITLHCGEIPNK------EE--IQSML-----DFLPQRIGHACCF-EEEEWRKLKSS--KIPV 266 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~gl~~t~HAGE~~~~------e~--i~~ai-----~l~a~RIGHG~~~-~~~l~~~l~~~--~I~l 266 (269)
+...+.++++.+++.|+++.+|++...+. |. +...+ ++.--|| |=+++ ..+.++++++. +|..
T Consensus 118 ~~~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~~~~~i~~~la~~~~~~~-hi~Hvst~~~~~~i~~ak~~Vt~ 196 (347)
T 2z26_A 118 SVDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLTALKV-VFEHITTKDAADYVRDGNERLAA 196 (347)
T ss_dssp CGGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHHHHHHHSTTCCE-EECSCCSHHHHHHHHTSCTTEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHHHHHHHHHHHHhhcCCcE-EEEECCcHHHHHHHHHhCCCceE
Confidence 34678899999999999999999865421 22 22222 1221233 55554 46777777764 4777
Q ss_pred eeC
Q 024296 267 RIS 269 (269)
Q Consensus 267 Eic 269 (269)
|+|
T Consensus 197 e~~ 199 (347)
T 2z26_A 197 TIT 199 (347)
T ss_dssp EEC
T ss_pred eec
Confidence 876
No 189
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=30.75 E-value=2.8e+02 Score=24.42 Aligned_cols=63 Identities=17% Similarity=0.205 Sum_probs=36.1
Q ss_pred hhHHH--HH---HHHHHcCCceeeecCCCC--------ChhHHHHHHh--cCC-Cc--ccccccCCHHHHHHHHh--CCC
Q 024296 205 TTFLP--AL---KFAREQGLQITLHCGEIP--------NKEEIQSMLD--FLP-QR--IGHACCFEEEEWRKLKS--SKI 264 (269)
Q Consensus 205 ~~f~~--~f---~~ar~~gl~~t~HAGE~~--------~~e~i~~ai~--l~a-~R--IGHG~~~~~~l~~~l~~--~~I 264 (269)
..|.+ ++ +.|.+.|+++.+|.|... .+..+...++ -.+ -| +.||..-..+ +..+.+ .++
T Consensus 204 ~~~~p~~l~~~~e~a~e~glpv~iH~g~~d~~~~~~~~~p~~l~~ll~~~~~P~lkiVl~Hg~~~~~~-~~~l~~~~~nv 282 (376)
T 2qpx_A 204 KPLIDYMLYHVAPFIIAQDMPLQFHVGYGDADTDMYLGNPLLMRDYLKAFTKKGLKVVLLHCYPYHRE-AGYLASVFPNL 282 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEESCCCTTSCGGGCCGGGGHHHHHHHGGGTCCEEEEECTTCHHH-HHHHHHHSTTE
T ss_pred hhHhHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCccccCHHHHHHHHhcCCCCCCcEEEECCCccHHH-HHHHHHhCCCE
Confidence 34555 55 999999999999999732 2344555554 222 13 5785433333 333333 455
Q ss_pred ceee
Q 024296 265 PVRI 268 (269)
Q Consensus 265 ~lEi 268 (269)
-+.+
T Consensus 283 y~d~ 286 (376)
T 2qpx_A 283 YFDI 286 (376)
T ss_dssp EEEC
T ss_pred EEec
Confidence 5443
No 190
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=30.43 E-value=1.2e+02 Score=25.94 Aligned_cols=76 Identities=11% Similarity=-0.071 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHH---HHHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i---~~ai~l~a~ 243 (269)
.+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+ +.|-+.|++
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGAR 100 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCC
Confidence 456667777777766433344444444422234567788888887764 49999999987766655 345557877
Q ss_pred cc
Q 024296 244 RI 245 (269)
Q Consensus 244 RI 245 (269)
=+
T Consensus 101 av 102 (294)
T 3b4u_A 101 NI 102 (294)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 191
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=30.34 E-value=45 Score=28.43 Aligned_cols=52 Identities=8% Similarity=0.031 Sum_probs=36.8
Q ss_pred CCceEEEecCCCCCCCC-----hhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh
Q 024296 187 DLGVVGIDLSGNPTKGE-----WTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD 239 (269)
Q Consensus 187 ~~~vvGidl~G~E~~~~-----~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~ 239 (269)
..+|+||.+.+.-...+ -+.|.+.++.|++.|+++.+|.+.. ....+.+.+.
T Consensus 99 ~~gv~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~-~l~~l~~ll~ 155 (303)
T 4do7_A 99 GTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFER-QLPDVQAFCA 155 (303)
T ss_dssp SSCEEEEECCGGGSSCHHHHHHCHHHHHHHHHHHHTTCEEEECCCGG-GHHHHHHHHH
T ss_pred hcCceEEEecCcCCCCccccccCHHHHHHHHHHHHCCCeEEEecCHH-HHHHHHHHHH
Confidence 55799999875422111 1468999999999999999999863 2345655554
No 192
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=30.07 E-value=1.2e+02 Score=26.39 Aligned_cols=86 Identities=12% Similarity=0.155 Sum_probs=54.6
Q ss_pred HHHHHHhhCCCceEEEecCCCCC--CC---C----hhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccc-
Q 024296 178 TVKLALEMRDLGVVGIDLSGNPT--KG---E----WTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGH- 247 (269)
Q Consensus 178 ~~~~a~~~~~~~vvGidl~G~E~--~~---~----~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGH- 247 (269)
.++.|.++...|---||+.|.-. +. + ...+.++.+..++.++++.+=. ..++-+.+|++.|++=|--
T Consensus 48 a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT---~~~~Va~aAl~aGa~iINdV 124 (294)
T 2y5s_A 48 ALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDT---YKPAVMRAALAAGADLINDI 124 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEEC---CCHHHHHHHHHHTCSEEEET
T ss_pred HHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEEC---CCHHHHHHHHHcCCCEEEEC
Confidence 34444454444544555554222 11 1 3457888888877799988843 6788888999988754431
Q ss_pred -cccCCHHHHHHHHhCCCcee
Q 024296 248 -ACCFEEEEWRKLKSSKIPVR 267 (269)
Q Consensus 248 -G~~~~~~l~~~l~~~~I~lE 267 (269)
|.. +|+.++.+++.+.++=
T Consensus 125 sg~~-d~~m~~~~a~~~~~vV 144 (294)
T 2y5s_A 125 WGFR-QPGAIDAVRDGNSGLC 144 (294)
T ss_dssp TTTC-STTHHHHHSSSSCEEE
T ss_pred CCCC-chHHHHHHHHhCCCEE
Confidence 222 6788889998887764
No 193
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=29.79 E-value=1.1e+02 Score=26.48 Aligned_cols=73 Identities=12% Similarity=0.160 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCC--CC-CCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGN--PT-KGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDF 240 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~--E~-~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l 240 (269)
.+.+...+.++..++. ++.|+=+.|. |. .-+.++...+++.+.+. .+++.+++|..+..+.|. .|-+.
T Consensus 40 iD~~~l~~li~~li~~---Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~ 116 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQ---GINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKA 116 (315)
T ss_dssp BCHHHHHHHHHHHHHT---TCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHc---CCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 3566667777766654 4555545442 32 23557777888777663 599999999877666553 45557
Q ss_pred CCCcc
Q 024296 241 LPQRI 245 (269)
Q Consensus 241 ~a~RI 245 (269)
|++-+
T Consensus 117 Gadav 121 (315)
T 3si9_A 117 GADAV 121 (315)
T ss_dssp TCSEE
T ss_pred CCCEE
Confidence 77644
No 194
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=29.74 E-value=1.5e+02 Score=26.13 Aligned_cols=76 Identities=11% Similarity=0.062 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~a~ 243 (269)
.+.+...+.++..++..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.|. .|-++|++
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 456667777777776543455555555433334567788888777653 599999999877666553 44556776
Q ss_pred cc
Q 024296 244 RI 245 (269)
Q Consensus 244 RI 245 (269)
-+
T Consensus 129 av 130 (343)
T 2v9d_A 129 GI 130 (343)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 195
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=29.46 E-value=1.3e+02 Score=25.79 Aligned_cols=76 Identities=14% Similarity=0.049 Sum_probs=45.1
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~a~ 243 (269)
.+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+|+|..+..+.+. .|-++|++
T Consensus 20 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 20 VNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCC
Confidence 345666667776665433344444444422223556777777776653 599999999877665553 44456765
Q ss_pred cc
Q 024296 244 RI 245 (269)
Q Consensus 244 RI 245 (269)
-+
T Consensus 100 av 101 (292)
T 3daq_A 100 AI 101 (292)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 196
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=29.43 E-value=1.4e+02 Score=24.20 Aligned_cols=50 Identities=14% Similarity=0.110 Sum_probs=36.9
Q ss_pred HHHHHHHHc-CCceeeecCCCCChhHHHHHHhcCCCcccccccC--CHHHHHHH
Q 024296 209 PALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCF--EEEEWRKL 259 (269)
Q Consensus 209 ~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~--~~~l~~~l 259 (269)
+..+..++. ++|+.+|.|=. +++.+..++..|+++|-=|... +|+.+..+
T Consensus 64 ~~i~~i~~~~~ipv~v~ggi~-~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~ 116 (244)
T 2y88_A 64 ELLAEVVGKLDVQVELSGGIR-DDESLAAALATGCARVNVGTAALENPQWCARV 116 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCC-SHHHHHHHHHTTCSEEEECHHHHHCHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEECCCC-CHHHHHHHHHcCCCEEEECchHhhChHHHHHH
Confidence 666666654 89999998764 6778889999999999777653 56544433
No 197
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=29.34 E-value=2.5e+02 Score=23.51 Aligned_cols=21 Identities=24% Similarity=-0.045 Sum_probs=17.0
Q ss_pred HHHHHHHHhcCCeEEEEecCC
Q 024296 79 QEVVEDFASENIVYLELRTTP 99 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr~~p 99 (269)
.+.++.+++-|..++|++..|
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~~ 38 (340)
T 2zds_A 18 EEVCRLARDFGYDGLELACWG 38 (340)
T ss_dssp HHHHHHHHHHTCSEEEEESST
T ss_pred HHHHHHHHHcCCCEEEecccc
Confidence 566777888899999998754
No 198
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=29.29 E-value=2.8e+02 Score=23.96 Aligned_cols=101 Identities=11% Similarity=0.097 Sum_probs=55.0
Q ss_pred eEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCC-CCChhhHHHHHHHHHH---cCCceeeecCCCCChhHH
Q 024296 159 YVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPT-KGEWTTFLPALKFARE---QGLQITLHCGEIPNKEEI 234 (269)
Q Consensus 159 ~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~-~~~~~~f~~~f~~ar~---~gl~~t~HAGE~~~~e~i 234 (269)
.+++|+-... ++.++.....++|.+..-+ +|--. .|... +..+++ ..+++...+ ..+++.+=-|= .+.+..
T Consensus 175 ~lKVIlEt~~-Lt~eei~~A~~ia~eaGAD-fVKTS-TGf~~~GAT~ed-v~lmr~~v~~~g~~v~VKAAGGI-rt~edA 249 (288)
T 3oa3_A 175 ILKVILETSQ-LTADEIIAGCVLSSLAGAD-YVKTS-TGFNGPGASIEN-VSLMSAVCDSLQSETRVKASGGI-RTIEDC 249 (288)
T ss_dssp EEEEECCGGG-CCHHHHHHHHHHHHHTTCS-EEECC-CSSSSCCCCHHH-HHHHHHHHHHSSSCCEEEEESSC-CSHHHH
T ss_pred CceEEEECCC-CCHHHHHHHHHHHHHcCCC-EEEcC-CCCCCCCCCHHH-HHHHHHHHHHhCCCceEEEeCCC-CCHHHH
Confidence 3677764332 4556555566666665444 33222 22222 222333 445555543 35777776664 467788
Q ss_pred HHHHhcCCCcccccccCCHHHHHHHHhCCCce
Q 024296 235 QSMLDFLPQRIGHACCFEEEEWRKLKSSKIPV 266 (269)
Q Consensus 235 ~~ai~l~a~RIGHG~~~~~~l~~~l~~~~I~l 266 (269)
.++++.|++||| +..-..+++-.+.+++..
T Consensus 250 l~mi~aGA~RiG--tS~g~~I~~~~~~~~~~~ 279 (288)
T 3oa3_A 250 VKMVRAGAERLG--ASAGVKIVNETRLGNRQV 279 (288)
T ss_dssp HHHHHTTCSEEE--ESCHHHHHHHHTC-----
T ss_pred HHHHHcCCceee--hhhHHHHHHHHHhcCCCC
Confidence 888899999996 444456666666666543
No 199
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=29.25 E-value=31 Score=34.95 Aligned_cols=24 Identities=25% Similarity=0.414 Sum_probs=21.0
Q ss_pred Ccchhccc-----cCCCCCHHHHHHHHHH
Q 024296 8 PKVELHAH-----LNGSIRDSTLLELARV 31 (269)
Q Consensus 8 PK~eLH~H-----L~Gs~~~~tl~~la~~ 31 (269)
+.+|||+| |+|+.+++.+.+.|++
T Consensus 5 ~~vdLH~HT~~S~lDG~~~~~elv~~A~~ 33 (910)
T 2hnh_A 5 RFVHLRVHSDYSMIDGLAKTAPLVKKAAA 33 (910)
T ss_dssp CCCCCCBCCGGGSSSCCSCHHHHHHHHHH
T ss_pred ceeeecccccCchhcccCCHHHHHHHHHH
Confidence 36999999 4789999999999985
No 200
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=28.89 E-value=1.4e+02 Score=25.50 Aligned_cols=76 Identities=11% Similarity=0.084 Sum_probs=45.6
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~a~ 243 (269)
.+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+. .|-+.|++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVD 98 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCC
Confidence 455666667776665432334434433322223567777888777653 499999999877665553 44456766
Q ss_pred cc
Q 024296 244 RI 245 (269)
Q Consensus 244 RI 245 (269)
=+
T Consensus 99 av 100 (291)
T 3a5f_A 99 GL 100 (291)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 201
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=28.85 E-value=1.2e+02 Score=26.22 Aligned_cols=77 Identities=9% Similarity=0.054 Sum_probs=47.3
Q ss_pred CCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcCC
Q 024296 169 RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFLP 242 (269)
Q Consensus 169 ~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~a 242 (269)
..+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+. .|-+.|+
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Ga 108 (306)
T 1o5k_A 29 ELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGA 108 (306)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCC
Confidence 3456667777777666433334444444322234567777888777653 499999999977666553 4445677
Q ss_pred Ccc
Q 024296 243 QRI 245 (269)
Q Consensus 243 ~RI 245 (269)
+=+
T Consensus 109 dav 111 (306)
T 1o5k_A 109 NGV 111 (306)
T ss_dssp SEE
T ss_pred CEE
Confidence 644
No 202
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=28.38 E-value=2.8e+02 Score=23.63 Aligned_cols=52 Identities=15% Similarity=0.109 Sum_probs=36.3
Q ss_pred HHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccccccCC-HH-HHHHHHhCCCc
Q 024296 208 LPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFE-EE-EWRKLKSSKIP 265 (269)
Q Consensus 208 ~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~~-~~-l~~~l~~~~I~ 265 (269)
....+.+++.|+++.+-. ..+++....++.+|++ |+..+ |+ +.+.++++++.
T Consensus 258 ~~~v~~~~~~Gl~V~~WT--Vn~~~~~~~l~~~GVD----gIiTD~P~~~~~~l~~~g~~ 311 (313)
T 3l12_A 258 PELVAEAHDLGLIVLTWT--VNEPEDIRRMATTGVD----GIVTDYPGRTQRILIDMGLS 311 (313)
T ss_dssp HHHHHHHHHTTCEEEEBC--CCSHHHHHHHHHHTCS----EEEESCHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHCCCEEEEEc--CCCHHHHHHHHHcCCC----EEEeCCHHHHHHHHHhcCcC
Confidence 356778888999887765 3456777778888876 55553 65 67777777763
No 203
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=28.25 E-value=1.9e+02 Score=24.75 Aligned_cols=85 Identities=18% Similarity=0.128 Sum_probs=50.5
Q ss_pred CCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCC--ceeeec-CCCCChhHHHHHHhcCCCcc
Q 024296 169 RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGL--QITLHC-GEIPNKEEIQSMLDFLPQRI 245 (269)
Q Consensus 169 ~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl--~~t~HA-GE~~~~e~i~~ai~l~a~RI 245 (269)
..+.++..+.++.+.+. ++..|.+.|.|.--. .++.++++.+++.+. .+++.. |-. -.+.+....+.|.++|
T Consensus 49 ~ls~e~i~~~i~~~~~~---g~~~i~~tGGEPll~-~~l~~li~~~~~~~~~~~i~i~TNG~l-l~~~~~~L~~~g~~~v 123 (340)
T 1tv8_A 49 LLTFDEMARIAKVYAEL---GVKKIRITGGEPLMR-RDLDVLIAKLNQIDGIEDIGLTTNGLL-LKKHGQKLYDAGLRRI 123 (340)
T ss_dssp SCCHHHHHHHHHHHHHT---TCCEEEEESSCGGGS-TTHHHHHHHHTTCTTCCEEEEEECSTT-HHHHHHHHHHHTCCEE
T ss_pred CCCHHHHHHHHHHHHHC---CCCEEEEeCCCccch-hhHHHHHHHHHhCCCCCeEEEEeCccc-hHHHHHHHHHCCCCEE
Confidence 35677887777776643 455677788664222 357888888888754 555532 211 1233333344688898
Q ss_pred cccccC-CHHHHHH
Q 024296 246 GHACCF-EEEEWRK 258 (269)
Q Consensus 246 GHG~~~-~~~l~~~ 258 (269)
.-++.. +++..+.
T Consensus 124 ~iSld~~~~~~~~~ 137 (340)
T 1tv8_A 124 NVSLDAIDDTLFQS 137 (340)
T ss_dssp EEECCCSSHHHHHH
T ss_pred EEecCCCCHHHHHH
Confidence 877754 4544333
No 204
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=28.21 E-value=49 Score=29.48 Aligned_cols=25 Identities=12% Similarity=0.105 Sum_probs=21.5
Q ss_pred ChhhHHHHHHHHHHcCCceeeecCC
Q 024296 203 EWTTFLPALKFAREQGLQITLHCGE 227 (269)
Q Consensus 203 ~~~~f~~~f~~ar~~gl~~t~HAGE 227 (269)
+.+.+..+++.|++.|+++++|+.+
T Consensus 162 ~~~~l~~~~~~a~~~g~~v~~H~~~ 186 (458)
T 1gkr_A 162 SDGELFEIFQEIAACGSVIVVHAEN 186 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEECCC
Confidence 4577888999999999999999954
No 205
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=27.43 E-value=48 Score=18.69 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=18.9
Q ss_pred CChhhHHHHHHHHHHcCCceeee
Q 024296 202 GEWTTFLPALKFAREQGLQITLH 224 (269)
Q Consensus 202 ~~~~~f~~~f~~ar~~gl~~t~H 224 (269)
+.|++...+-+.|+++++++|+-
T Consensus 12 gtpeelkklkeeakkanirvtfw 34 (36)
T 2ki0_A 12 GTPEELKKLKEEAKKANIRVTFW 34 (36)
T ss_dssp CCHHHHHHHHHHHHHHCCCCCBC
T ss_pred CCHHHHHHHHHHHHhccEEEEee
Confidence 46788888888999999998863
No 206
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=27.39 E-value=66 Score=30.25 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=22.2
Q ss_pred CChhhHHHHHHHHHHcCCceeeecCC
Q 024296 202 GEWTTFLPALKFAREQGLQITLHCGE 227 (269)
Q Consensus 202 ~~~~~f~~~f~~ar~~gl~~t~HAGE 227 (269)
.+.+.+..+++.|++.|+++.+|+.+
T Consensus 176 ~s~e~l~~~~~~A~~~g~~v~~H~e~ 201 (559)
T 2fty_A 176 ISDYDIMSAMYATRKNGFTTMLHAEN 201 (559)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCC
Confidence 34577888999999999999999954
No 207
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=27.33 E-value=1.2e+02 Score=25.99 Aligned_cols=66 Identities=8% Similarity=0.121 Sum_probs=42.0
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ 235 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~ 235 (269)
.+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+.
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~ 87 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAIS 87 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHH
Confidence 456667777777766533444444444432234567788888877653 499999999876555553
No 208
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=27.31 E-value=1.4e+02 Score=25.26 Aligned_cols=19 Identities=5% Similarity=-0.120 Sum_probs=14.9
Q ss_pred HHHHHHHhcCCeEEEEecC
Q 024296 80 EVVEDFASENIVYLELRTT 98 (269)
Q Consensus 80 ~~~~~~~~dnV~Y~Elr~~ 98 (269)
.+++.+++-|..++|+...
T Consensus 39 ~~~~~a~~~G~~~vEl~~~ 57 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYD 57 (316)
T ss_dssp HHHHHHHTSCCCEEEEETT
T ss_pred HHHHHHHHcCCCEEEeecc
Confidence 3456667899999999865
No 209
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=27.26 E-value=1.7e+02 Score=25.10 Aligned_cols=87 Identities=16% Similarity=0.208 Sum_probs=57.9
Q ss_pred HHHHHhhCCCceEEEecCCCCCC---C--C----hhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCCcccc--
Q 024296 179 VKLALEMRDLGVVGIDLSGNPTK---G--E----WTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGH-- 247 (269)
Q Consensus 179 ~~~a~~~~~~~vvGidl~G~E~~---~--~----~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGH-- 247 (269)
++.+.++...|---||+.|.-.. . + .....|+.+..++.++++.+-- ..++-.+.|++.|++=|--
T Consensus 33 ~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSIDT---~~~~Va~~al~aGa~iINDVs 109 (270)
T 4hb7_A 33 INRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDT---FRSEVAEACLKLGVDMINDQW 109 (270)
T ss_dssp HHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEEC---SCHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEEEC---CCHHHHHHHHHhccceecccc
Confidence 33444444445555666553222 1 1 2347788888887788888753 6678778999999986653
Q ss_pred cccCCHHHHHHHHhCCCceee
Q 024296 248 ACCFEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 248 G~~~~~~l~~~l~~~~I~lEi 268 (269)
|...+|+.++.+++.+.++=+
T Consensus 110 ~g~~d~~m~~~va~~~~~~vl 130 (270)
T 4hb7_A 110 AGLYDHRMFQIVAKYDAEIIL 130 (270)
T ss_dssp TTSSCTHHHHHHHHTTCEEEE
T ss_pred ccccchhHHHHHHHcCCCeEE
Confidence 445589999999999987643
No 210
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=27.24 E-value=60 Score=28.20 Aligned_cols=42 Identities=14% Similarity=0.000 Sum_probs=32.7
Q ss_pred CCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCCC
Q 024296 199 PTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQ 243 (269)
Q Consensus 199 E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a~ 243 (269)
|..-.+.+-..+.++|++.||-.++-+ .+++..+++.++|||
T Consensus 144 E~gm~~~~eve~I~~A~~~gL~Ti~~v---~~~eeA~amA~agpD 185 (286)
T 2p10_A 144 ETGMSYAQEVEMIAEAHKLDLLTTPYV---FSPEDAVAMAKAGAD 185 (286)
T ss_dssp HTTCCHHHHHHHHHHHHHTTCEECCEE---CSHHHHHHHHHHTCS
T ss_pred hcCCCHHHHHHHHHHHHHCCCeEEEec---CCHHHHHHHHHcCCC
Confidence 665567788889999999999988888 667777776666654
No 211
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=27.22 E-value=1.3e+02 Score=26.06 Aligned_cols=90 Identities=9% Similarity=-0.007 Sum_probs=52.8
Q ss_pred CceEEEEEEEe-C--CCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCC
Q 024296 157 KIYVRLLLSID-R--RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPN 230 (269)
Q Consensus 157 ~i~~rli~~~~-R--~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~ 230 (269)
|+-+-++--++ . ..+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+.
T Consensus 13 Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t 92 (318)
T 3qfe_A 13 GIWCPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHST 92 (318)
T ss_dssp EEEEECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSH
T ss_pred CeEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCH
Confidence 44444443343 2 2356666777776665433344444444422223567788888877663 5999999998776
Q ss_pred hhHHH---HHHhcCCCccc
Q 024296 231 KEEIQ---SMLDFLPQRIG 246 (269)
Q Consensus 231 ~e~i~---~ai~l~a~RIG 246 (269)
.+.|. .|-+.|++-+-
T Consensus 93 ~~ai~la~~a~~~Gadavl 111 (318)
T 3qfe_A 93 RQVLEHINDASVAGANYVL 111 (318)
T ss_dssp HHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEE
Confidence 66553 44456776443
No 212
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=27.16 E-value=1.2e+02 Score=26.45 Aligned_cols=73 Identities=8% Similarity=0.081 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCC--CC-CCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGN--PT-KGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDF 240 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~--E~-~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l 240 (269)
.+.+...+.++...+. ++-|+=+.|. |. .-+.++...+++.+.+. .+++.+++|..+..+.+. .|-++
T Consensus 42 iD~~~l~~lv~~li~~---Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~ 118 (315)
T 3na8_A 42 LDLPALGRSIERLIDG---GVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESL 118 (315)
T ss_dssp BCHHHHHHHHHHHHHT---TCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHc---CCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 3566667777766654 4555555552 33 23557777888777663 599999999877665553 45556
Q ss_pred CCCcc
Q 024296 241 LPQRI 245 (269)
Q Consensus 241 ~a~RI 245 (269)
|++-+
T Consensus 119 Gadav 123 (315)
T 3na8_A 119 GAEAV 123 (315)
T ss_dssp TCSEE
T ss_pred CCCEE
Confidence 77543
No 213
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=26.98 E-value=1.5e+02 Score=25.97 Aligned_cols=76 Identities=11% Similarity=-0.082 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHH---HHHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI---QSMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i---~~ai~l~a~ 243 (269)
.+.+...+.++..++..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.| +.|-+.|++
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGAD 131 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 456667777777766533445544444432234567788888877653 49999999987766655 344456776
Q ss_pred cc
Q 024296 244 RI 245 (269)
Q Consensus 244 RI 245 (269)
=+
T Consensus 132 av 133 (332)
T 2r8w_A 132 AL 133 (332)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 214
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=26.74 E-value=40 Score=25.83 Aligned_cols=39 Identities=10% Similarity=0.181 Sum_probs=25.3
Q ss_pred ChhHHHHHHhcC--CCc--cccccc---CCHHHHHHHHhCCCceee
Q 024296 230 NKEEIQSMLDFL--PQR--IGHACC---FEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 230 ~~e~i~~ai~l~--a~R--IGHG~~---~~~~l~~~l~~~~I~lEi 268 (269)
+++++...+.+. ++= ||-|-. ++|++.+.++++||.+|+
T Consensus 54 ~~e~l~~l~~~~p~pevliiGTG~~~~~l~p~l~~~l~~~GI~vE~ 99 (135)
T 2fvt_A 54 DRYSLQRVFDNANAIDTLIVGTGADVWIAPRQLREALRGVNVVLDT 99 (135)
T ss_dssp CTTTTHHHHHTTTSCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHhcCCCCCEEEEcCCCCCCcCCHHHHHHHHHcCCEEEE
Confidence 345554444443 222 355543 478999999999999997
No 215
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=26.54 E-value=1.7e+02 Score=24.93 Aligned_cols=89 Identities=19% Similarity=0.175 Sum_probs=49.2
Q ss_pred CCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCC------ChhhHHHHHHHHHHc-CCc-ee---eecCCCCChhHHHH
Q 024296 168 RRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKG------EWTTFLPALKFAREQ-GLQ-IT---LHCGEIPNKEEIQS 236 (269)
Q Consensus 168 R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~------~~~~f~~~f~~ar~~-gl~-~t---~HAGE~~~~e~i~~ 236 (269)
|..+++...+.++...+. ++.-|-|.|..... ....+.++++.+++. |++ +. .|.... +++-+..
T Consensus 31 r~r~~e~i~~ei~~l~~~---G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l-~~e~l~~ 106 (304)
T 2qgq_A 31 RSRSIEDITREVEDLLKE---GKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHL-TEEIISA 106 (304)
T ss_dssp CBCCHHHHHHHHHHHHHT---TCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGC-CHHHHHH
T ss_pred eeeCHHHHHHHHHHHHHC---CCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccC-CHHHHHH
Confidence 566788777777665553 23333333322210 125688888888876 764 22 222221 3343333
Q ss_pred HHhcC--CCcccccccC-CHHHHHHHH
Q 024296 237 MLDFL--PQRIGHACCF-EEEEWRKLK 260 (269)
Q Consensus 237 ai~l~--a~RIGHG~~~-~~~l~~~l~ 260 (269)
..+.| ..++.-|++. ++++++.|.
T Consensus 107 l~~~g~~~~~l~i~lqs~s~~vl~~m~ 133 (304)
T 2qgq_A 107 MLELDKVVKYFDVPVQHGSDKILKLMG 133 (304)
T ss_dssp HHHCTTBCCEEECCCBCSCHHHHHHTT
T ss_pred HHhCCCCccEEEEecccCCHHHHHHhC
Confidence 33467 7898888864 666655554
No 216
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=26.44 E-value=1.8e+02 Score=26.00 Aligned_cols=77 Identities=13% Similarity=0.119 Sum_probs=46.2
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcCCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFLPQ 243 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~a~ 243 (269)
.+.+...+.++..++..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+. .|-+.|++
T Consensus 77 ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 156 (360)
T 4dpp_A 77 FDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMH 156 (360)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 356666777776665433344444444422223556777777766653 599999999876665553 44456776
Q ss_pred ccc
Q 024296 244 RIG 246 (269)
Q Consensus 244 RIG 246 (269)
-+-
T Consensus 157 avl 159 (360)
T 4dpp_A 157 AAL 159 (360)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 217
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=26.20 E-value=35 Score=30.38 Aligned_cols=27 Identities=22% Similarity=0.363 Sum_probs=22.3
Q ss_pred cchhcccc---CCCCCHHHHHHHHHHhccCCCc
Q 024296 9 KVELHAHL---NGSIRDSTLLELARVLGEKGVI 38 (269)
Q Consensus 9 K~eLH~HL---~Gs~~~~tl~~la~~~~~~g~~ 38 (269)
++|||+|- +|+.+++.+.+.|++ .|+.
T Consensus 20 ~~DlH~Ht~~SDg~~~~~elv~~A~~---~Gl~ 49 (343)
T 3e38_A 20 KCDFHMHSVFSDGLVWPTVRVDEAYR---DGLD 49 (343)
T ss_dssp EEECCBCCTTTTCSBCHHHHHHHHHH---TTCS
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHHH---cCCC
Confidence 68999996 688999999998885 5654
No 218
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=26.05 E-value=59 Score=27.80 Aligned_cols=74 Identities=11% Similarity=-0.102 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHH---HHHhcCCCcc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQ---SMLDFLPQRI 245 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~---~ai~l~a~RI 245 (269)
.+.+...+.++...+. -++++-.+..|.=..-+.++...+++.+.+ .+++.+++|..+..+.+. .|-+.|++=+
T Consensus 16 iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpviaGvg~~~t~~ai~la~~A~~~Gadav 92 (283)
T 2pcq_A 16 LDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFLVGLMEETLPQAEGALLEAKAAGAMAL 92 (283)
T ss_dssp BCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCEEEECCSSHHHHHHHHHHHHHHTCSEE
T ss_pred cCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 4566677777777766 666776666654333466788888888877 899999999877666553 4555687644
No 219
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=25.54 E-value=1.3e+02 Score=25.86 Aligned_cols=73 Identities=11% Similarity=0.002 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCC--CC-CCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcC
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGN--PT-KGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFL 241 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~--E~-~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~ 241 (269)
+.+...+.++...+ .++.|+=+.|. |. .-+.++...+++.+.+. .+++.+++|..+..+.|. .|-+.|
T Consensus 33 D~~~l~~lv~~li~---~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 109 (307)
T 3s5o_A 33 DYGKLEENLHKLGT---FPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVG 109 (307)
T ss_dssp CHHHHHHHHHHHTT---SCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHH---cCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcC
Confidence 45555555555543 34555555442 33 23567788888888774 599999999877666553 455578
Q ss_pred CCccc
Q 024296 242 PQRIG 246 (269)
Q Consensus 242 a~RIG 246 (269)
++-+-
T Consensus 110 adavl 114 (307)
T 3s5o_A 110 ADAAM 114 (307)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 76544
No 220
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=25.52 E-value=1.2e+02 Score=24.71 Aligned_cols=107 Identities=7% Similarity=-0.156 Sum_probs=61.1
Q ss_pred CCCCceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCC--CCCChhhHHHHHHHHHHcCCceeeecCCC-CC
Q 024296 154 RGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNP--TKGEWTTFLPALKFAREQGLQITLHCGEI-PN 230 (269)
Q Consensus 154 ~~~~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E--~~~~~~~f~~~f~~ar~~gl~~t~HAGE~-~~ 230 (269)
...++++.+.....|..+.+. .++.+.+. |+-||.+.+.. ...++.....+-+.+++.||.++.+..-. ..
T Consensus 14 ~~~~~klg~~~~~~~~~~~~~---~l~~~~~~---G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~ 87 (257)
T 3lmz_A 14 AVNPFHLGMAGYTFVNFDLDT---TLKTLERL---DIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKS 87 (257)
T ss_dssp CCCSSEEEECGGGGTTSCHHH---HHHHHHHT---TCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECS
T ss_pred CCCceEEEEEEEeecCCCHHH---HHHHHHHh---CCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCC
Confidence 344677777766677776654 44444443 68888887652 12233445556667778899988765321 12
Q ss_pred hhHHH----HHHhcCCCccccccc--CCHHHHHHHHhCCCce
Q 024296 231 KEEIQ----SMLDFLPQRIGHACC--FEEEEWRKLKSSKIPV 266 (269)
Q Consensus 231 ~e~i~----~ai~l~a~RIGHG~~--~~~~l~~~l~~~~I~l 266 (269)
.+.+. .|-.+|++.|.=-.. .-..+.++.++.||.|
T Consensus 88 ~~~~~~~i~~A~~lGa~~v~~~p~~~~l~~l~~~a~~~gv~l 129 (257)
T 3lmz_A 88 EEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHY 129 (257)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECGGGHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHhCCCEEEecCCHHHHHHHHHHHHHcCCEE
Confidence 33333 344478887752111 1134666666667653
No 221
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=25.43 E-value=28 Score=30.80 Aligned_cols=14 Identities=36% Similarity=0.370 Sum_probs=10.7
Q ss_pred CCc-chhccccCCCC
Q 024296 7 MPK-VELHAHLNGSI 20 (269)
Q Consensus 7 lPK-~eLH~HL~Gs~ 20 (269)
||- +|.|+|+.++.
T Consensus 54 ~PGlID~H~H~~~~~ 68 (376)
T 1o12_A 54 MPGFVDPHIHGVVGA 68 (376)
T ss_dssp EECEEEEEECEETTE
T ss_pred ccCeEEEeecCCCCC
Confidence 676 89999996543
No 222
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=25.41 E-value=1.5e+02 Score=25.28 Aligned_cols=76 Identities=9% Similarity=0.114 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHh-hCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhcCC
Q 024296 170 ETTEAAMETVKLALE-MRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDFLP 242 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~-~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l~a 242 (269)
.+.+...+.++...+ ..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|-.+..+.+. .|-+.|+
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 100 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGY 100 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 456666777777666 433334444444322223567778888877653 499999999977666553 4445676
Q ss_pred Ccc
Q 024296 243 QRI 245 (269)
Q Consensus 243 ~RI 245 (269)
+=+
T Consensus 101 dav 103 (293)
T 1f6k_A 101 DCL 103 (293)
T ss_dssp SEE
T ss_pred CEE
Confidence 643
No 223
>1vk8_A Hypothetical protein TM0486; protein with possible role in cell WALL biogenesis, structur genomics, joint center for structural genomics; HET: UNL; 1.80A {Thermotoga maritima} SCOP: d.58.48.1
Probab=24.93 E-value=1.5e+02 Score=21.65 Aligned_cols=48 Identities=21% Similarity=0.294 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHhcCCeEEEEecCCCCcccCCCCHHHHHHHHHHHHHhh
Q 024296 72 ATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAV 123 (269)
Q Consensus 72 ~~~~~~~~~~~~~~~~dnV~Y~Elr~~p~~~~~~g~~~~~~~~~v~~~~~~~ 123 (269)
+.+..++.++++-+.+.|+.| +.+|-..+-.| +++++++.+.+..+..
T Consensus 29 ~svs~~Va~~i~vi~~sGL~y---~~~pmgT~IEG-e~devm~vvk~~~e~~ 76 (106)
T 1vk8_A 29 GRLHEVIDRAIEKISSWGMKY---EVGPSNTTVEG-EFEEIMDRVKELARYL 76 (106)
T ss_dssp GGHHHHHHHHHHHHHTTCSCE---EECSSCEEEEE-CHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHcCCCe---EeCCCccEEEc-CHHHHHHHHHHHHHHH
Confidence 678888889999889999999 56776654445 6888888777666543
No 224
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=24.92 E-value=38 Score=27.88 Aligned_cols=28 Identities=21% Similarity=0.278 Sum_probs=20.0
Q ss_pred CCcchhccccCCCC---CHHHHHHHHHHhccCCC
Q 024296 7 MPKVELHAHLNGSI---RDSTLLELARVLGEKGV 37 (269)
Q Consensus 7 lPK~eLH~HL~Gs~---~~~tl~~la~~~~~~g~ 37 (269)
|+-+|-||||+..- +++.+++-+++ .|+
T Consensus 3 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~---~Gv 33 (259)
T 1zzm_A 3 CRFIDTHCHFDFPPFSGDEEASLQRAAQ---AGV 33 (259)
T ss_dssp CCEEESCBCTTSTTTTTCHHHHHHHHHH---TTE
T ss_pred ceEEEeeecCCchhhccCHHHHHHHHHH---cCC
Confidence 67799999998753 56666666663 565
No 225
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=24.73 E-value=2.8e+02 Score=22.52 Aligned_cols=78 Identities=13% Similarity=0.201 Sum_probs=49.0
Q ss_pred ceEEEecCCC---CCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cCCC--cc---------cccc----
Q 024296 189 GVVGIDLSGN---PTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FLPQ--RI---------GHAC---- 249 (269)
Q Consensus 189 ~vvGidl~G~---E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~a~--RI---------GHG~---- 249 (269)
.++.+||.|- ....-+.....+++.+++.|+.+++=.|= +...+...+. ++.+ -| ..|-
T Consensus 7 kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR--~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~ 84 (290)
T 3dnp_A 7 QLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNR--HFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFE 84 (290)
T ss_dssp CEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEBCSS--CHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCSEE
T ss_pred eEEEEcCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEECCC--ChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEEEe
Confidence 3789999984 22334567888999999999999885554 3455555443 4543 11 1121
Q ss_pred -cCC----HHHHHHHHhCCCceee
Q 024296 250 -CFE----EEEWRKLKSSKIPVRI 268 (269)
Q Consensus 250 -~~~----~~l~~~l~~~~I~lEi 268 (269)
.+. .++++.+.++++.+.+
T Consensus 85 ~~l~~~~~~~i~~~~~~~~~~~~~ 108 (290)
T 3dnp_A 85 KRISDDHTFNIVQVLESYQCNIRL 108 (290)
T ss_dssp CCCCHHHHHHHHHHHHTSSCEEEE
T ss_pred cCCCHHHHHHHHHHHHHcCceEEE
Confidence 122 2477888888877654
No 226
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=24.54 E-value=2.8e+02 Score=22.39 Aligned_cols=50 Identities=24% Similarity=0.408 Sum_probs=30.1
Q ss_pred eEEEecCCC---CCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHh-cC
Q 024296 190 VVGIDLSGN---PTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLD-FL 241 (269)
Q Consensus 190 vvGidl~G~---E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~-l~ 241 (269)
.+.+||.|- ....-+.....+++++++.|+++++=.|- +...+...+. ++
T Consensus 7 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR--~~~~~~~~~~~l~ 60 (279)
T 3mpo_A 7 LIAIDIDGTLLNEKNELAQATIDAVQAAKAQGIKVVLCTGR--PLTGVQPYLDAMD 60 (279)
T ss_dssp EEEECC-----------CHHHHHHHHHHHHTTCEEEEECSS--CHHHHHHHHHHTT
T ss_pred EEEEcCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCC--CHHHHHHHHHHcC
Confidence 788999884 33334466788899999999998886654 3445555443 44
No 227
>1bxy_A Protein (ribosomal protein L30); X-RAY crystallography, conformational changes, ribosome; 1.90A {Thermus thermophilus} SCOP: d.59.1.1 PDB: 1giy_X 1ml5_x* 1vsa_X 1vsp_X 1yl3_X 2b66_3 2b9n_3 2b9p_3 2hgj_2 2hgq_2 2hgu_2 2j01_3 2j03_3 2jl6_3 2jl8_3 2v47_3 2v49_3 2wdi_3 2wdj_3 2wdl_3 ...
Probab=24.44 E-value=1.3e+02 Score=19.54 Aligned_cols=43 Identities=12% Similarity=0.149 Sum_probs=34.1
Q ss_pred CceeeecCCCCChhHHHHHHh-cCCCcccccccC--CHHHHHHHHh
Q 024296 219 LQITLHCGEIPNKEEIQSMLD-FLPQRIGHACCF--EEEEWRKLKS 261 (269)
Q Consensus 219 l~~t~HAGE~~~~e~i~~ai~-l~a~RIGHG~~~--~~~l~~~l~~ 261 (269)
+++|.--|-.+.++..++.+. ||-.||+|-+-. .|...-++..
T Consensus 4 ~kItlvrS~ig~~~~~r~tl~~LGL~k~~~~v~~~dtp~irGMI~k 49 (60)
T 1bxy_A 4 LKVKLVKSPIGYPKDQKAALKALGLRRLQQERVLEDTPAIRGNVEK 49 (60)
T ss_dssp EEEEECSCCTTCCHHHHHHHHHHTCCSTTCEEEEECCHHHHHHHHH
T ss_pred EEEEEeecCCCCCHHHHHHHHHhCCCCCCCEEEecCCHHHHhHHHH
Confidence 677888888888888999888 899999999865 5776555544
No 228
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=24.40 E-value=1.3e+02 Score=25.77 Aligned_cols=73 Identities=12% Similarity=0.101 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCC--CC-CCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGN--PT-KGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDF 240 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~--E~-~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l 240 (269)
.+.+...+.++...+. ++-|+=+.|. |. .-+.++...+++.+.+. .+++.+++|..+..+.+. .|-+.
T Consensus 18 iD~~~l~~lv~~li~~---Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~ 94 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKH---GAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQA 94 (297)
T ss_dssp ECHHHHHHHHHHHHHT---TCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHc---CCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhc
Confidence 4566666777766654 4555555553 33 23567788888877653 499999999877666553 44456
Q ss_pred CCCcc
Q 024296 241 LPQRI 245 (269)
Q Consensus 241 ~a~RI 245 (269)
|++=+
T Consensus 95 Gadav 99 (297)
T 2rfg_A 95 GADAV 99 (297)
T ss_dssp TCSEE
T ss_pred CCCEE
Confidence 76643
No 229
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=24.12 E-value=2.8e+02 Score=22.23 Aligned_cols=92 Identities=21% Similarity=0.181 Sum_probs=45.0
Q ss_pred EEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHHHHHhcCC
Q 024296 163 LLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLP 242 (269)
Q Consensus 163 i~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~~ai~l~a 242 (269)
++-+.|..+++.+.+.++.+.+..- .++-+.+- . ..-.+.++.+++ -.++.-+|=...++.+..|++.|+
T Consensus 15 ii~vi~~~~~~~~~~~~~~l~~gGv-~~iel~~k----~---~~~~~~i~~~~~--~~~~~gag~vl~~d~~~~A~~~GA 84 (207)
T 2yw3_A 15 LLPLLTVRGGEDLLGLARVLEEEGV-GALEITLR----T---EKGLEALKALRK--SGLLLGAGTVRSPKEAEAALEAGA 84 (207)
T ss_dssp EEEEECCCSCCCHHHHHHHHHHTTC-CEEEEECS----S---THHHHHHHHHTT--SSCEEEEESCCSHHHHHHHHHHTC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHcCC-CEEEEeCC----C---hHHHHHHHHHhC--CCCEEEeCeEeeHHHHHHHHHcCC
Confidence 3444566666656666665554311 13333221 1 112345555555 233344443445566666666666
Q ss_pred CcccccccCCHHHHHHHHhCCCc
Q 024296 243 QRIGHACCFEEEEWRKLKSSKIP 265 (269)
Q Consensus 243 ~RIGHG~~~~~~l~~~l~~~~I~ 265 (269)
+=+ |.-..++++.+..++.+++
T Consensus 85 d~v-~~~~~d~~v~~~~~~~g~~ 106 (207)
T 2yw3_A 85 AFL-VSPGLLEEVAALAQARGVP 106 (207)
T ss_dssp SEE-EESSCCHHHHHHHHHHTCC
T ss_pred CEE-EcCCCCHHHHHHHHHhCCC
Confidence 644 4434556666666655544
No 230
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=24.07 E-value=3.7e+02 Score=23.64 Aligned_cols=86 Identities=13% Similarity=0.042 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcC-CCcccccc
Q 024296 172 TEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFL-PQRIGHAC 249 (269)
Q Consensus 172 ~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~-a~RIGHG~ 249 (269)
.+.+.+.++.+.+. ++-.|++.+.-....+....+..+..++. ++++.. .|-. +++...++++-| ++=|+=|-
T Consensus 249 ~~~~~~~a~~l~~~---G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~-~Ggi-~~~~a~~~l~~g~aD~V~igR 323 (365)
T 2gou_A 249 ILTYTAAAALLNKH---RIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIY-AGRY-NAEKAEQAINDGLADMIGFGR 323 (365)
T ss_dssp HHHHHHHHHHHHHT---TCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEE-ESSC-CHHHHHHHHHTTSCSEEECCH
T ss_pred HHHHHHHHHHHHHc---CCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEE-eCCC-CHHHHHHHHHCCCcceehhcH
Confidence 44444445444433 45555555421100010111333444443 677644 4555 788888888876 88776664
Q ss_pred c--CCHHHHHHHHhC
Q 024296 250 C--FEEEEWRKLKSS 262 (269)
Q Consensus 250 ~--~~~~l~~~l~~~ 262 (269)
. .+|++.+.+++.
T Consensus 324 ~~i~~P~l~~~~~~g 338 (365)
T 2gou_A 324 PFIANPDLPERLRHG 338 (365)
T ss_dssp HHHHCTTHHHHHHHT
T ss_pred HHHhCchHHHHHHcC
Confidence 3 389998888764
No 231
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=23.58 E-value=3.8e+02 Score=23.57 Aligned_cols=51 Identities=12% Similarity=0.038 Sum_probs=34.2
Q ss_pred HHHHHHHc-CCceeeecCCCCChhHHHHHHhcC-CCccccccc--CCHHHHHHHHhC
Q 024296 210 ALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFL-PQRIGHACC--FEEEEWRKLKSS 262 (269)
Q Consensus 210 ~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~-a~RIGHG~~--~~~~l~~~l~~~ 262 (269)
..+..|+. ++++.. .|-. +++...++++-| +|=|+=|-. .+|++.+.+++.
T Consensus 285 ~~~~v~~~~~iPvi~-~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g 339 (364)
T 1vyr_A 285 FRQKVRERFHGVIIG-AGAY-TAEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQKK 339 (364)
T ss_dssp HHHHHHHHCCSEEEE-ESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHT
T ss_pred HHHHHHHHCCCCEEE-ECCc-CHHHHHHHHHCCCccEEEECHHHHhChhHHHHHHcC
Confidence 34444443 677544 4555 788888888865 887766643 489998888864
No 232
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=23.34 E-value=3.2e+02 Score=22.66 Aligned_cols=85 Identities=15% Similarity=0.183 Sum_probs=48.1
Q ss_pred CceEEEEEEEeCC---CCHHHHHHHHHHHHhhCCCceE---EEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCC
Q 024296 157 KIYVRLLLSIDRR---ETTEAAMETVKLALEMRDLGVV---GIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPN 230 (269)
Q Consensus 157 ~i~~rli~~~~R~---~~~~~~~~~~~~a~~~~~~~vv---Gidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~ 230 (269)
+..+++|+-.-.- .++++.....+++.+...+.|. ||. +..+...+-..+++..-...+++.+=.|= .+
T Consensus 127 ~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~----~~~gAt~edv~lm~~~v~~~v~VKaaGGI-rt 201 (231)
T 3ndo_A 127 AATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFH----PSGGASVQAVEIMARTVGERLGVKASGGI-RT 201 (231)
T ss_dssp TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCC----TTCSCCHHHHHHHHHHHTTTSEEEEESSC-CS
T ss_pred CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCC----CCCCCCHHHHHHHHHHhCCCceEEEeCCC-CC
Confidence 4567777743221 1566666666666665444222 331 01121123344455544456777776664 45
Q ss_pred hhHHHHHHhcCCCccc
Q 024296 231 KEEIQSMLDFLPQRIG 246 (269)
Q Consensus 231 ~e~i~~ai~l~a~RIG 246 (269)
.+...+.++.|++|||
T Consensus 202 ~~~a~~~i~aGa~RiG 217 (231)
T 3ndo_A 202 AEQAAAMLDAGATRLG 217 (231)
T ss_dssp HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhcchhcc
Confidence 6778888889999997
No 233
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=23.11 E-value=39 Score=25.74 Aligned_cols=39 Identities=10% Similarity=0.128 Sum_probs=27.6
Q ss_pred ChhHHHHHHhcCCC--ccccccc---CCHHHHHHHHhCCCceee
Q 024296 230 NKEEIQSMLDFLPQ--RIGHACC---FEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 230 ~~e~i~~ai~l~a~--RIGHG~~---~~~~l~~~l~~~~I~lEi 268 (269)
+++++...+...++ =||-|-. +.|++.+.++++||.+|+
T Consensus 53 ~~e~l~~ll~~~pevliiGTG~~~~~l~p~~~~~l~~~GI~vE~ 96 (132)
T 2gm2_A 53 QPAHMDAVLALNPAVILLGTGERQQFPSTDVLAACLTRGIGLEA 96 (132)
T ss_dssp CTTTSHHHHHHCCSEEEEECTTSCCCCCHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHhcCCCEEEECCCCCCCcCCHHHHHHHHHcCCEEEE
Confidence 45555555555554 3566643 478999999999999997
No 234
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=23.10 E-value=1.7e+02 Score=25.27 Aligned_cols=76 Identities=9% Similarity=-0.029 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc--CCceeeecCCCCChhHHH---HHHhcCCCc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ--GLQITLHCGEIPNKEEIQ---SMLDFLPQR 244 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~--gl~~t~HAGE~~~~e~i~---~ai~l~a~R 244 (269)
.+.+...+.++..++..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.|. .|-++|++-
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gada 105 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAG 105 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCE
Confidence 356667777777766433444444444432233557777787776664 599999999877665553 444567754
Q ss_pred c
Q 024296 245 I 245 (269)
Q Consensus 245 I 245 (269)
+
T Consensus 106 v 106 (313)
T 3dz1_A 106 V 106 (313)
T ss_dssp E
T ss_pred E
Confidence 3
No 235
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=23.07 E-value=3.5e+02 Score=22.98 Aligned_cols=94 Identities=11% Similarity=0.007 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHHHHhhCCCc-eEEEecCCCCCCCChhhHHHHHHHHH-HcCCceeeecCCCCChhHHHHHHhcCCCcccc
Q 024296 170 ETTEAAMETVKLALEMRDLG-VVGIDLSGNPTKGEWTTFLPALKFAR-EQGLQITLHCGEIPNKEEIQSMLDFLPQRIGH 247 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~-vvGidl~G~E~~~~~~~f~~~f~~ar-~~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGH 247 (269)
++.++..++++.+.+..-+. -+|+ .+.+..-....++..+++.+. ..+.++.+|. .+.+.+..|++.|+++|.=
T Consensus 27 ~~~e~k~~i~~~L~~~Gv~~IE~g~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~---~~~~~i~~a~~aG~~~v~i 102 (302)
T 2ftp_A 27 IEVADKIRLVDDLSAAGLDYIEVGS-FVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA---PNLKGFEAALESGVKEVAV 102 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEE-CSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC---CSHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECC-CcCccccccccCHHHHHHHhhhcCCCEEEEEe---CCHHHHHHHHhCCcCEEEE
Confidence 45777778888777654332 3444 222211111123334433332 2488999998 3678899999999988753
Q ss_pred cccCC-------------------HHHHHHHHhCCCcee
Q 024296 248 ACCFE-------------------EEEWRKLKSSKIPVR 267 (269)
Q Consensus 248 G~~~~-------------------~~l~~~l~~~~I~lE 267 (269)
-...+ .+.+++.++.++.+|
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~ 141 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVR 141 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 22222 246788889998876
No 236
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=23.04 E-value=80 Score=27.70 Aligned_cols=77 Identities=16% Similarity=0.035 Sum_probs=43.5
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecC-CCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHHHHHHhcCCCcc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLS-GNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQSMLDFLPQRI 245 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~-G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~~ai~l~a~RI 245 (269)
.+|+++.+.++ .-.+..=++|+-+ |.-..+.+..=.+.++..++. ++|+++|.|=..+.+.++.++.+|..-|
T Consensus 172 T~Peea~~Fv~---TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~Ki 248 (306)
T 3pm6_A 172 TTPEESEEFVA---TGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKV 248 (306)
T ss_dssp CCHHHHHHHHT---TTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEE
T ss_pred CCHHHHHHHHH---cCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEE
Confidence 35887776652 1111122344433 322112222222334444443 7999999998778899999998887666
Q ss_pred cccc
Q 024296 246 GHAC 249 (269)
Q Consensus 246 GHG~ 249 (269)
-=++
T Consensus 249 Ni~T 252 (306)
T 3pm6_A 249 NVNR 252 (306)
T ss_dssp EESH
T ss_pred EeCh
Confidence 5443
No 237
>3r8s_Z 50S ribosomal protein L30; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_X 1p86_X 2awb_Y 2aw4_Y 2i2v_Z 2j28_Y 2i2t_Z* 2qao_Y* 2qba_Y* 2qbc_Y* 2qbe_Y 2qbg_Y 2qbi_Y* 2qbk_Y* 2qov_Y 2qox_Y 2qoz_Y* 2qp1_Y* 2rdo_Y 2vhm_Y ...
Probab=22.95 E-value=1.2e+02 Score=19.60 Aligned_cols=43 Identities=19% Similarity=0.142 Sum_probs=33.9
Q ss_pred CceeeecCCCCChhHHHHHHh-cCCCcccccccC--CHHHHHHHHh
Q 024296 219 LQITLHCGEIPNKEEIQSMLD-FLPQRIGHACCF--EEEEWRKLKS 261 (269)
Q Consensus 219 l~~t~HAGE~~~~e~i~~ai~-l~a~RIGHG~~~--~~~l~~~l~~ 261 (269)
+++|..-|-.+.++..++.+. ||-.||+|-+.. .|...-++..
T Consensus 4 lkItlvrS~ig~~~~~r~tl~~LGL~k~~~~v~~~dtp~irGMI~k 49 (58)
T 3r8s_Z 4 IKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINA 49 (58)
T ss_dssp EEEEECSCSTTCCHHHHHHHHHHTCCSTTCCCEEECCHHHHHHHHH
T ss_pred EEEEEeecCCCCCHHHHHHHHHcCCCCCCCEEEecCCHHHHHHHHH
Confidence 677888888888888999888 899999999864 5776555543
No 238
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=22.84 E-value=2.5e+02 Score=22.05 Aligned_cols=96 Identities=18% Similarity=0.125 Sum_probs=53.8
Q ss_pred EEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEec--CCCCCCCChhhHHHHHHHHHHc--CCceeeecCCCCChhH-HH
Q 024296 161 RLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDL--SGNPTKGEWTTFLPALKFAREQ--GLQITLHCGEIPNKEE-IQ 235 (269)
Q Consensus 161 rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl--~G~E~~~~~~~f~~~f~~ar~~--gl~~t~HAGE~~~~e~-i~ 235 (269)
++|++++. .+.+.+.+.++.+. + |+|+ .|.+. ....=.++.+..|+. ++++.+|.-=..+++. +.
T Consensus 2 ~li~a~D~-~~~~~~~~~~~~~~----~---~~diie~G~p~--~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~ 71 (211)
T 3f4w_A 2 KLQLALDE-LTLPEAMVFMDKVV----D---DVDIIEVGTPF--LIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQ 71 (211)
T ss_dssp EEEEEECS-CCHHHHHHHHHHHG----G---GCSEEEECHHH--HHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHH
T ss_pred cEEEEeCC-CCHHHHHHHHHHhh----c---CccEEEeCcHH--HHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHH
Confidence 68888875 34555555555442 1 2222 12110 001112456666665 7888877655556665 77
Q ss_pred HHHhcCCCccc-ccccCC---HHHHHHHHhCCCce
Q 024296 236 SMLDFLPQRIG-HACCFE---EEEWRKLKSSKIPV 266 (269)
Q Consensus 236 ~ai~l~a~RIG-HG~~~~---~~l~~~l~~~~I~l 266 (269)
.+.+.|++.|- |+.... ..+++.+++.++.+
T Consensus 72 ~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~ 106 (211)
T 3f4w_A 72 LLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQV 106 (211)
T ss_dssp HHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEE
T ss_pred HHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeE
Confidence 88889998764 443321 35677777777654
No 239
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=22.81 E-value=4.8e+02 Score=24.52 Aligned_cols=92 Identities=15% Similarity=0.075 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeec-CCCC---ChhHH----HHHHhcCCC
Q 024296 172 TEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHC-GEIP---NKEEI----QSMLDFLPQ 243 (269)
Q Consensus 172 ~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HA-GE~~---~~e~i----~~ai~l~a~ 243 (269)
.+.....++.+.+..-+.|.-|+ +-.+ .....+..+.|++.|..+.... -|.+ +++.+ ..+.+.|++
T Consensus 116 ddv~~~~ve~a~~aGvd~vrIf~-s~sd----~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad 190 (539)
T 1rqb_A 116 DEVVDRFVDKSAENGMDVFRVFD-AMND----PRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGAD 190 (539)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECC-TTCC----THHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCS
T ss_pred ccccHHHHHHHHhCCCCEEEEEE-ehhH----HHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCC
Confidence 34456667777665444333332 2222 2567788889999998774332 2433 33433 344557998
Q ss_pred ccccccc---CCH----HHHHHHHhC---CCceee
Q 024296 244 RIGHACC---FEE----EEWRKLKSS---KIPVRI 268 (269)
Q Consensus 244 RIGHG~~---~~~----~l~~~l~~~---~I~lEi 268 (269)
+|.=.=. +.| ++++.++++ +++|++
T Consensus 191 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~ 225 (539)
T 1rqb_A 191 SIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINL 225 (539)
T ss_dssp EEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred EEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEE
Confidence 8765511 244 466666653 456653
No 240
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=22.36 E-value=3.9e+02 Score=23.26 Aligned_cols=163 Identities=21% Similarity=0.186 Sum_probs=90.6
Q ss_pred CHHHHHHHHHHHHH---HHHhcCCeEEEEecC----------CCCc---ccCCCCHHHHHHHHHHHHHhhhhcccccccc
Q 024296 70 DHATVTRITQEVVE---DFASENIVYLELRTT----------PKRN---ESIGMSKRSYMDAVVEGLRAVSAVDVDFASR 133 (269)
Q Consensus 70 ~~~~~~~~~~~~~~---~~~~dnV~Y~Elr~~----------p~~~---~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~ 133 (269)
|.+++.+++.++.+ .+.+-|.--+||... |..+ ..-|-+.+.-.+-+.+.++..++.
T Consensus 143 t~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~a------- 215 (349)
T 3hgj_A 143 DEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREV------- 215 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-------
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHH-------
Confidence 45677777776665 445689999999865 5432 122446655444444444444320
Q ss_pred ccccccccccccccccccCCCCCCceEEEEEE--EeCCCCHHHHHHHHHHHHhhCCCceEEEecC-CC--CC-C--CChh
Q 024296 134 SIDVRRPVNTKNMNDACNGTRGKKIYVRLLLS--IDRRETTEAAMETVKLALEMRDLGVVGIDLS-GN--PT-K--GEWT 205 (269)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~i~~rli~~--~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~-G~--E~-~--~~~~ 205 (269)
--.++.+.+|+=.. ..-..+.++..+.++.+.+. ++-.|++. |. +. . ..+.
T Consensus 216 ------------------vG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~---Gvd~i~vs~g~~~~~~~~~~~~~ 274 (349)
T 3hgj_A 216 ------------------VPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKEL---GVDLLDCSSGGVVLRVRIPLAPG 274 (349)
T ss_dssp ------------------SCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHT---TCCEEEEECCCSCSSSCCCCCTT
T ss_pred ------------------hcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHc---CCCEEEEecCCcCcccccCCCcc
Confidence 01234556664321 01134556555555544433 45556655 21 11 0 1122
Q ss_pred hHHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcC-CCccccccc--CCHHHHHHHHh
Q 024296 206 TFLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFL-PQRIGHACC--FEEEEWRKLKS 261 (269)
Q Consensus 206 ~f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~-a~RIGHG~~--~~~~l~~~l~~ 261 (269)
.+.+..+..++. ++++.. .|-..+++...++++-| +|-|+=|-. .+|++.+.+++
T Consensus 275 ~~~~~~~~ir~~~~iPVi~-~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~ 333 (349)
T 3hgj_A 275 FQVPFADAVRKRVGLRTGA-VGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAK 333 (349)
T ss_dssp TTHHHHHHHHHHHCCEEEE-CSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHH
T ss_pred ccHHHHHHHHHHcCceEEE-ECCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHHH
Confidence 345555666554 777644 45556788888999876 898877754 38888777665
No 241
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=22.35 E-value=55 Score=30.29 Aligned_cols=25 Identities=16% Similarity=0.114 Sum_probs=21.1
Q ss_pred CChhhHHHHHHHHHHcCCceeeecC
Q 024296 202 GEWTTFLPALKFAREQGLQITLHCG 226 (269)
Q Consensus 202 ~~~~~f~~~f~~ar~~gl~~t~HAG 226 (269)
.+.+.+..+++.|++.|+++++|+-
T Consensus 169 ~~~e~l~~~~~~A~~~g~~v~vH~e 193 (521)
T 2ftw_A 169 VTDQEMYHIFKRCKELGAIAQVHAE 193 (521)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECS
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEcC
Confidence 3456788899999999999999993
No 242
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=22.22 E-value=1.4e+02 Score=25.54 Aligned_cols=73 Identities=12% Similarity=0.119 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCC--CCC-CChhhHHHHHHHHHHc---CCceeeecCCCCChhHHH---HHHhc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGN--PTK-GEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEIQ---SMLDF 240 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~--E~~-~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i~---~ai~l 240 (269)
.+.+...+.++...+. ++.|+=+.|. |.. -+.++...+++.+.+. .+++.+++|..+..+.+. .|-+.
T Consensus 18 iD~~~l~~lv~~li~~---Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~ 94 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEE---GSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNA 94 (292)
T ss_dssp ECHHHHHHHHHHHHHT---TCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHc---CCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHc
Confidence 4566666777766654 5666655553 432 3567788888877663 499999999877666553 44456
Q ss_pred CCCcc
Q 024296 241 LPQRI 245 (269)
Q Consensus 241 ~a~RI 245 (269)
|++=+
T Consensus 95 Gadav 99 (292)
T 2vc6_A 95 GADGV 99 (292)
T ss_dssp TCSEE
T ss_pred CCCEE
Confidence 77643
No 243
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=22.05 E-value=2.2e+02 Score=25.01 Aligned_cols=76 Identities=9% Similarity=0.010 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCChhHHH---HHHhcCCCcc
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQ---SMLDFLPQRI 245 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~e~i~---~ai~l~a~RI 245 (269)
.+.+...+.++..++..-++++-.+..|.=..-+.++...+++.+-...+++.+++|..+..+.|. .|-++|++=+
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadav 122 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGL 122 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEE
Confidence 456667777777766433445544444432233556777777763344699999999877666553 4445677654
No 244
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=22.04 E-value=4.3e+02 Score=23.65 Aligned_cols=71 Identities=8% Similarity=-0.098 Sum_probs=42.1
Q ss_pred EEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc-CCceeeecCCCC-ChhHHHHH
Q 024296 160 VRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIP-NKEEIQSM 237 (269)
Q Consensus 160 ~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-gl~~t~HAGE~~-~~e~i~~a 237 (269)
+.+.+.++...+++++.+.++...++.-.++ |...++.++ +.++..++. ++|+. +||.. +++...++
T Consensus 231 ~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~i--------EeP~~~~d~-~~~~~l~~~~~iPIa--~dE~~~~~~~~~~l 299 (412)
T 3stp_A 231 NDLMLECYMGWNLDYAKRMLPKLAPYEPRWL--------EEPVIADDV-AGYAELNAMNIVPIS--GGEHEFSVIGCAEL 299 (412)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEE--------ECCSCTTCH-HHHHHHHHTCSSCEE--ECTTCCSHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhcCCCEE--------ECCCCcccH-HHHHHHHhCCCCCEE--eCCCCCCHHHHHHH
Confidence 4566788888898888777766554422212 444444443 344555543 66654 68875 46667777
Q ss_pred HhcC
Q 024296 238 LDFL 241 (269)
Q Consensus 238 i~l~ 241 (269)
++.+
T Consensus 300 i~~~ 303 (412)
T 3stp_A 300 INRK 303 (412)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 6643
No 245
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=21.97 E-value=55 Score=25.62 Aligned_cols=23 Identities=22% Similarity=0.228 Sum_probs=18.8
Q ss_pred cccc---cCCHHHHHHHHhCCCceee
Q 024296 246 GHAC---CFEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 246 GHG~---~~~~~l~~~l~~~~I~lEi 268 (269)
|-|- .+.|++.+.+.++||.+|+
T Consensus 95 GTG~~~~~l~p~~~~~L~~~GIgvE~ 120 (150)
T 3cpk_A 95 GTGRRQHLLGPEQVRPLLAMGVGVEA 120 (150)
T ss_dssp ECTTSCCCCCHHHHHHHHTTTCEEEE
T ss_pred cCCCCCCCCCHHHHHHHHHcCCEEEE
Confidence 5553 3579999999999999997
No 246
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=21.78 E-value=3.2e+02 Score=22.06 Aligned_cols=69 Identities=13% Similarity=0.119 Sum_probs=42.5
Q ss_pred CceEEEecCCCCCCCChhhHHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcCCCcccccccC--CHHHHHHH
Q 024296 188 LGVVGIDLSGNPTKGEWTTFLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCF--EEEEWRKL 259 (269)
Q Consensus 188 ~~vvGidl~G~E~~~~~~~f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~--~~~l~~~l 259 (269)
+.+.-.|+.+... ......+..+.+++. ++|+.+|.|= .+++.+..++..|++.+.=|... +|+.+..+
T Consensus 45 d~i~v~d~~~~~~--~~~~~~~~i~~i~~~~~ipvi~~ggI-~~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~ 116 (253)
T 1thf_D 45 DELVFLDITASVE--KRKTMLELVEKVAEQIDIPFTVGGGI-HDFETASELILRGADKVSINTAAVENPSLITQI 116 (253)
T ss_dssp CEEEEEESSCSSS--HHHHHHHHHHHHHTTCCSCEEEESSC-CSHHHHHHHHHTTCSEEEESHHHHHCTHHHHHH
T ss_pred CEEEEECCchhhc--CCcccHHHHHHHHHhCCCCEEEeCCC-CCHHHHHHHHHcCCCEEEEChHHHhChHHHHHH
Confidence 3444455554321 112334455555554 8999999877 46788889999999988666543 55544333
No 247
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=21.71 E-value=58 Score=24.39 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=27.4
Q ss_pred ChhHHHHHHhcCCCc--cccccc----CCHHHHHHHHhCCCceee
Q 024296 230 NKEEIQSMLDFLPQR--IGHACC----FEEEEWRKLKSSKIPVRI 268 (269)
Q Consensus 230 ~~e~i~~ai~l~a~R--IGHG~~----~~~~l~~~l~~~~I~lEi 268 (269)
+++++...++..++= ||-|-. ++|++.+.++++||.+|+
T Consensus 50 ~~~~l~~ll~~~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~ 94 (122)
T 2ab1_A 50 QPADVKEVVEKGVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRV 94 (122)
T ss_dssp CHHHHHHHHTTCCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHhhCCCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEE
Confidence 456666665544443 366642 578999999999999996
No 248
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=21.63 E-value=3.8e+02 Score=23.28 Aligned_cols=56 Identities=20% Similarity=0.046 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCCCCC--CChhhHHHHHHHHHH-cCCceeeecCC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGNPTK--GEWTTFLPALKFARE-QGLQITLHCGE 227 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~--~~~~~f~~~f~~ar~-~gl~~t~HAGE 227 (269)
.+|+++.+.++.. --+..=++|+-+-.-.+ +.|..=.+.++..++ .++|+++|-|=
T Consensus 153 T~Peea~~Fv~~T--gvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgS 211 (305)
T 1rvg_A 153 TNPEEARIFMERT--GADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGAS 211 (305)
T ss_dssp CCHHHHHHHHHHH--CCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCC
T ss_pred CCHHHHHHHHHHH--CCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCC
Confidence 4688887776643 11222445555422222 233333344454444 48999999988
No 249
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=21.61 E-value=1.8e+02 Score=23.50 Aligned_cols=50 Identities=12% Similarity=0.108 Sum_probs=36.2
Q ss_pred HHHHHHHH-cCCceeeecCCCCChhHHHHHHhcCCCcccccccC--CHHHHHHH
Q 024296 209 PALKFARE-QGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCF--EEEEWRKL 259 (269)
Q Consensus 209 ~~f~~ar~-~gl~~t~HAGE~~~~e~i~~ai~l~a~RIGHG~~~--~~~l~~~l 259 (269)
+..+..++ .++|+.+|.|=. +++.+..++..|+++|.=|... +|+.+..+
T Consensus 65 ~~i~~i~~~~~ipv~v~ggI~-~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~ 117 (244)
T 1vzw_A 65 ALIAEVAQAMDIKVELSGGIR-DDDTLAAALATGCTRVNLGTAALETPEWVAKV 117 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCC-SHHHHHHHHHTTCSEEEECHHHHHCHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEECCcC-CHHHHHHHHHcCCCEEEECchHhhCHHHHHHH
Confidence 66666655 489999998764 5777888999999998767643 56544333
No 250
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=21.50 E-value=1.2e+02 Score=21.98 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=28.6
Q ss_pred eEEEecCCC---CCC------CChhhHHHHHHHHHHcCCceeeecCCCC
Q 024296 190 VVGIDLSGN---PTK------GEWTTFLPALKFAREQGLQITLHCGEIP 229 (269)
Q Consensus 190 vvGidl~G~---E~~------~~~~~f~~~f~~ar~~gl~~t~HAGE~~ 229 (269)
++.+||.|- ... ..++....+++.+++.|+++.+-.|-..
T Consensus 3 ~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 3 KLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp EEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred EEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 577888773 222 1235678889999999999999887643
No 251
>1wxm_A A-RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain (RBD), ubiquitin-like fold, A-RAF kinase, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=21.35 E-value=31 Score=24.49 Aligned_cols=22 Identities=9% Similarity=-0.023 Sum_probs=17.7
Q ss_pred cccCCHHHHHHHHhCCCceeeC
Q 024296 248 ACCFEEEEWRKLKSSKIPVRIS 269 (269)
Q Consensus 248 G~~~~~~l~~~l~~~~I~lEic 269 (269)
|..+.+.+.+.|+.|++..|+|
T Consensus 27 G~tlrdaL~KaLk~R~L~pe~C 48 (86)
T 1wxm_A 27 GMSVYDSLDKALKVRGLNQDCC 48 (86)
T ss_dssp SCBSHHHHHHHHHTTTCCSSSE
T ss_pred CcCHHHHHHHHHHHcCCCHHHe
Confidence 4445567899999999999988
No 252
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=21.30 E-value=52 Score=34.48 Aligned_cols=26 Identities=23% Similarity=0.404 Sum_probs=21.9
Q ss_pred cCCcchhcccc-----CCCCCHHHHHHHHHH
Q 024296 6 SMPKVELHAHL-----NGSIRDSTLLELARV 31 (269)
Q Consensus 6 ~lPK~eLH~HL-----~Gs~~~~tl~~la~~ 31 (269)
.++.+|||+|= +|+.+++.+.+.|++
T Consensus 4 ~~~fvdLH~HT~~SlLDG~~~~~elv~~A~~ 34 (1220)
T 2hpi_A 4 KLKFAHLHQHTQFSLLDGAAKLQDLLKWVKE 34 (1220)
T ss_dssp -CCCCCCSBCCTTSTTTCCCCHHHHHHHHHH
T ss_pred CCcEeEcccccCCCcccccCCHHHHHHHHHh
Confidence 46679999994 688999999999986
No 253
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=21.08 E-value=2.1e+02 Score=24.73 Aligned_cols=64 Identities=9% Similarity=0.080 Sum_probs=41.8
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHc---CCceeeecCCCCChhHH
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQ---GLQITLHCGEIPNKEEI 234 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~---gl~~t~HAGE~~~~e~i 234 (269)
+.+...+.++...+..-++++-.+..|.=..-+.++...+++.+.+. .+++.+++|..+..+.+
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai 92 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSI 92 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHH
Confidence 45566677777666544455555555533334567788888877764 59999999987655544
No 254
>3g23_A Peptidase U61, LD-carboxypeptidase A; flavodoxin-like fold, catalytic triad, merops S66 unassigned peptidases family; HET: MSE; 1.89A {Novosphingobium aromaticivorans}
Probab=20.96 E-value=2.4e+02 Score=23.95 Aligned_cols=56 Identities=9% Similarity=-0.002 Sum_probs=37.0
Q ss_pred eEEEEEEEeCCCCHHHHHHHHHHHH--hhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeec
Q 024296 159 YVRLLLSIDRRETTEAAMETVKLAL--EMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHC 225 (269)
Q Consensus 159 ~~rli~~~~R~~~~~~~~~~~~~a~--~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HA 225 (269)
.++.|+|+-=..+.......++.-. +..++.++|+ ++...+.....+.|...|+|.
T Consensus 68 ~i~aI~~~rGGyga~rlL~~lD~~~i~~~~PK~~~Gy-----------SDiTaL~~al~~~~~~~t~hG 125 (274)
T 3g23_A 68 AFEAVWFVRGGYGANRIAEDALARLGRAASAKQYLGY-----------SDAGTLLAALYAHRIGRSVHA 125 (274)
T ss_dssp TCSEEEESCCSSCTHHHHHHHHTTCCGGGGGCEEEEC-----------GGGHHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEeeccccHHHHHHhhhhhhhhhhCCcEEEEe-----------chHHHHHHHHHHhcCceEEEC
Confidence 3568888766677666666666332 2346789998 566655544456688888886
No 255
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=20.77 E-value=2.5e+02 Score=23.15 Aligned_cols=51 Identities=14% Similarity=0.097 Sum_probs=32.4
Q ss_pred CCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecC
Q 024296 169 RETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG 226 (269)
Q Consensus 169 ~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAG 226 (269)
..+++...+.++.+...+.++++-.... +....+.++.+++.|+|+.+--.
T Consensus 41 ~~~~~~~~~~i~~l~~~~vdgiIi~~~~-------~~~~~~~~~~~~~~~iPvV~~~~ 91 (313)
T 3m9w_A 41 NGNEETQMSQIENMINRGVDVLVIIPYN-------GQVLSNVVKEAKQEGIKVLAYDR 91 (313)
T ss_dssp TTCHHHHHHHHHHHHHTTCSEEEEECSS-------TTSCHHHHHHHHTTTCEEEEESS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCC-------hhhhHHHHHHHHHCCCeEEEECC
Confidence 4456655667777776666666654322 12345678888888999877644
No 256
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=20.71 E-value=4.7e+02 Score=23.57 Aligned_cols=71 Identities=17% Similarity=0.060 Sum_probs=41.2
Q ss_pred EEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHH-cCCceeeecCCCC-ChhHHHHH
Q 024296 160 VRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFARE-QGLQITLHCGEIP-NKEEIQSM 237 (269)
Q Consensus 160 ~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~-~gl~~t~HAGE~~-~~e~i~~a 237 (269)
+.+.+.++...+++++.+.++...++.-..+ |...++.++ ..++..++ -++|+. +||.. +++....+
T Consensus 204 ~~L~vDan~~~t~~~A~~~~~~Le~~~i~~i--------EeP~~~~~~-~~~~~l~~~~~iPIa--~dE~~~~~~~~~~~ 272 (433)
T 3rcy_A 204 ADLLFGTHGQFTTAGAIRLGQAIEPYSPLWY--------EEPVPPDNV-GAMAQVARAVRIPVA--TGERLTTKAEFAPV 272 (433)
T ss_dssp SEEEECCCSCBCHHHHHHHHHHHGGGCCSEE--------ECCSCTTCH-HHHHHHHHHSSSCEE--ECTTCCSHHHHHHH
T ss_pred CeEEEeCCCCCCHHHHHHHHHHhhhcCCCEE--------ECCCChhhH-HHHHHHHhccCCCEE--ecCCCCCHHHHHHH
Confidence 4566778888888888777665554432212 444444333 34444444 467754 68875 45666666
Q ss_pred HhcC
Q 024296 238 LDFL 241 (269)
Q Consensus 238 i~l~ 241 (269)
++.+
T Consensus 273 l~~g 276 (433)
T 3rcy_A 273 LREG 276 (433)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 6644
No 257
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=20.62 E-value=3.3e+02 Score=21.72 Aligned_cols=19 Identities=11% Similarity=-0.067 Sum_probs=14.5
Q ss_pred HHHHHHHHhcCCeEEEEec
Q 024296 79 QEVVEDFASENIVYLELRT 97 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr~ 97 (269)
.+.++.+++-|..++|+..
T Consensus 18 ~~~l~~~~~~G~~~vEl~~ 36 (260)
T 1k77_A 18 IERFAAARKAGFDAVEFLF 36 (260)
T ss_dssp GGHHHHHHHHTCSEEECSC
T ss_pred HHHHHHHHHhCCCEEEecC
Confidence 3455666778999999975
No 258
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=20.55 E-value=3.3e+02 Score=21.80 Aligned_cols=19 Identities=16% Similarity=0.094 Sum_probs=15.6
Q ss_pred HHHHHHHHhcCCeEEEEec
Q 024296 79 QEVVEDFASENIVYLELRT 97 (269)
Q Consensus 79 ~~~~~~~~~dnV~Y~Elr~ 97 (269)
.+.++.+++-|..++|+..
T Consensus 21 ~~~l~~~~~~G~~~vEl~~ 39 (275)
T 3qc0_A 21 AEAVDICLKHGITAIAPWR 39 (275)
T ss_dssp HHHHHHHHHTTCCEEECBH
T ss_pred HHHHHHHHHcCCCEEEecc
Confidence 4677778889999999975
No 259
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=20.49 E-value=3.4e+02 Score=22.13 Aligned_cols=57 Identities=14% Similarity=0.085 Sum_probs=34.6
Q ss_pred EEEEEeCC-CCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeec
Q 024296 162 LLLSIDRR-ETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHC 225 (269)
Q Consensus 162 li~~~~R~-~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HA 225 (269)
++++.... .+++...+.++.+...+.++++-. +.. .....+.++.+++.|+|++.--
T Consensus 36 ~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~---~~~----~~~~~~~~~~~~~~giPvV~~~ 93 (297)
T 3rot_A 36 LQILAPPGANDVPKQVQFIESALATYPSGIATT---IPS----DTAFSKSLQRANKLNIPVIAVD 93 (297)
T ss_dssp EEEECCSSSCCHHHHHHHHHHHHHTCCSEEEEC---CCC----SSTTHHHHHHHHHHTCCEEEES
T ss_pred EEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEe---CCC----HHHHHHHHHHHHHCCCCEEEEc
Confidence 44443333 266666677777776655555532 221 1335677888999999988754
No 260
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=20.38 E-value=3.1e+02 Score=24.06 Aligned_cols=92 Identities=16% Similarity=0.106 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHhhCCCceEEEecCCCCCC--CChh--hHHHHHHHHHHc-CCceeeecCCCCChhHHHHHHhcCCCcc
Q 024296 171 TTEAAMETVKLALEMRDLGVVGIDLSGNPTK--GEWT--TFLPALKFAREQ-GLQITLHCGEIPNKEEIQSMLDFLPQRI 245 (269)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~--~~~~--~f~~~f~~ar~~-gl~~t~HAGE~~~~e~i~~ai~l~a~RI 245 (269)
+|+++.+.++. .--+..=++|+-+-.-.+ +.|. .=.+.++..++. ++|+++|-|=+.+++-+...-.+| -+|
T Consensus 154 dPeea~~Fv~~--TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~~g-g~~ 230 (323)
T 2isw_A 154 EPQDAKKFVEL--TGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYG-GKM 230 (323)
T ss_dssp CHHHHHHHHHH--HCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTT-CCC
T ss_pred CHHHHHHHHHH--HCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHHhc-ccc
Q ss_pred cccccCCHHHHHHHHhCCCc
Q 024296 246 GHACCFEEEEWRKLKSSKIP 265 (269)
Q Consensus 246 GHG~~~~~~l~~~l~~~~I~ 265 (269)
+-..-+.++.++...+.||+
T Consensus 231 ~~~~Gvp~e~i~~ai~~GV~ 250 (323)
T 2isw_A 231 PDAVGVPIESIVHAIGEGVC 250 (323)
T ss_dssp TTCBCCCHHHHHHHHHTTEE
T ss_pred ccCCCCCHHHHHHHHHCCCe
No 261
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=20.23 E-value=2.4e+02 Score=23.87 Aligned_cols=71 Identities=13% Similarity=0.033 Sum_probs=45.5
Q ss_pred CCHHHHHHHHHHHHhhCCCceEEEecCCC--CC-CCChhhHHHHHHHHHHc--CCceeeecCCCCChhHH---HHHHhcC
Q 024296 170 ETTEAAMETVKLALEMRDLGVVGIDLSGN--PT-KGEWTTFLPALKFAREQ--GLQITLHCGEIPNKEEI---QSMLDFL 241 (269)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~~vvGidl~G~--E~-~~~~~~f~~~f~~ar~~--gl~~t~HAGE~~~~e~i---~~ai~l~ 241 (269)
.+.+...+.++...+. ++.|+=+.|. |. .-+.++...+++.+.+. | +.+++|..+..+.+ +.|-+.|
T Consensus 16 iD~~~l~~lv~~li~~---Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~G 90 (286)
T 2r91_A 16 LDPELFANHVKNITSK---GVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRG 90 (286)
T ss_dssp ECHHHHHHHHHHHHHT---TCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHC---CCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcC
Confidence 4566667777776664 4555544442 32 23567788888887764 6 88999987766655 3455578
Q ss_pred CCcc
Q 024296 242 PQRI 245 (269)
Q Consensus 242 a~RI 245 (269)
++-+
T Consensus 91 adav 94 (286)
T 2r91_A 91 AEAV 94 (286)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 7754
No 262
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=20.04 E-value=3.6e+02 Score=21.93 Aligned_cols=58 Identities=10% Similarity=0.102 Sum_probs=35.1
Q ss_pred EEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecC
Q 024296 162 LLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCG 226 (269)
Q Consensus 162 li~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAG 226 (269)
+++...-..+++.-.+.++.+...+.++++-... . .....+.++.+++.|+|+..=-.
T Consensus 37 ~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~---~----~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 37 VEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAI---D----PVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp EEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCS---S----TTTTHHHHHHHHHTTCCEEEESS
T ss_pred EEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCC---C----HHHHHHHHHHHHHCCCcEEEECC
Confidence 3343334456666667777777766666554322 1 12356678888889999876543
Done!