BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024298
(269 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa
Hydrolase In Complex With Quercetin
Length = 363
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 110/183 (60%), Gaps = 2/183 (1%)
Query: 41 DQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFC 99
++VL+ + + LNRP LNAL + + ++ + WE++P+ +++KGAG +AFC
Sbjct: 6 EEVLLGKKGCTGVITLNRPKFLNALTLNXIRQIYPQLKKWEQDPETFLIIIKGAGGKAFC 65
Query: 100 SGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQG 159
+GGD+ + + + K + FF Y G+ KP+VA++ GIT G G G+S+ G
Sbjct: 66 AGGDIRVISEA-EKAKQKIAPVFFREEYXLNNAVGSCQKPYVALIHGITXGGGVGLSVHG 124
Query: 160 MYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLAT 219
+RV T+K +F+ PET +G PD G ++L L G LG +LALTG +L G ++ G+AT
Sbjct: 125 QFRVATEKCLFAXPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIAT 184
Query: 220 HYT 222
H+
Sbjct: 185 HFV 187
>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Thermoresistibile
Length = 353
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 2/167 (1%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEG 114
LNRP +N+L MV + +WE + + VL+ GAG R C+GGDV+A+Y
Sbjct: 24 LNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKAD 83
Query: 115 KFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
E + +F+ Y+ G + KP+V+I+DGI MG G G+ G RVVTD T + PE
Sbjct: 84 GAEARRFWFDE-YRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPE 142
Query: 175 TQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 221
+GF PD G ++ LS PG LG + ALTG +G + I G A HY
Sbjct: 143 VGIGFIPDVGGTYLLSRAPGKLGLHAALTGAPFSGADAIVMGFADHY 189
>pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
pdb|3JU1|B Chain B, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY
PROTEIN
Length = 407
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEG 114
LN LNAL+ V W+++P I V++ G+G +AFC+GGDV ALY
Sbjct: 57 LNVEKALNALDLDXVRAXTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAA 116
Query: 115 K---FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFS 171
K E K FFE Y+ YL T+ KP + DGI G G G+ ++VVT+ + +
Sbjct: 117 KGQVTEVAKVFFEEEYRLDYLLHTYGKPVLVWGDGIVXGGGLGLXAGASHKVVTETSRIA 176
Query: 172 NPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHY 221
PE +G +PD G S++L+ PG G +L LT N + GLA HY
Sbjct: 177 XPEVTIGLYPDVGGSYFLNRXPGKXGLFLGLTAYHXNAADACYVGLADHY 226
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
pdb|4J2U|B Chain B, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
Length = 365
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 34 SSNDYLQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKG 93
S +D L +V GR L+RP+ LNAL + V + W +P++ V++
Sbjct: 22 SXSDVLIRKVRRAGRIT-----LSRPAALNALTCAXVQEIDAALRGWIGDPEVELVVIDA 76
Query: 94 AG-RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCG 152
G RAFC+GGD+ L+ G ++F+ Y+ F KP V++ G T G G
Sbjct: 77 EGPRAFCAGGDIAELHGRGVAGDHAFGQDFWRVEYRXNDRIAAFPKPIVSLXQGFTXGGG 136
Query: 153 AGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEM 212
G+ +R+V + + S PE +G PD G + L+ PG +G +L LTG + +
Sbjct: 137 VGLGCHARHRIVGETSQISXPECAIGLVPDVGGTHLLARAPGRIGVWLGLTGARXGPGDA 196
Query: 213 IACGLATHYT 222
I G A +
Sbjct: 197 IFAGFADRFV 206
>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3Q0G|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
Length = 257
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 7/181 (3%)
Query: 41 DQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCS 100
+ +LVE + LNRP LNALN+ ++ + +++PDIG +++ G+ +AF +
Sbjct: 4 ETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAA 63
Query: 101 GGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGM 160
G D+ + L F +FF T + ++ P +A + G +G G +++
Sbjct: 64 GADIKEMADLTFADAFT--ADFFATWGKLAAVR----TPTIAAVAGYALGGGCELAMMCD 117
Query: 161 YRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEY-LALTGEKLNGVEMIACGLAT 219
+ D F PE ++G P G S L+ G L LTG ++ E GL +
Sbjct: 118 VLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVS 177
Query: 220 H 220
Sbjct: 178 R 178
>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
Length = 258
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 7/181 (3%)
Query: 41 DQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCS 100
+ +LVE + LNRP LNALN+ ++ + +++PDIG +++ G+ +AF +
Sbjct: 5 ETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAA 64
Query: 101 GGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGM 160
G D+ + L F +FF T + ++ P +A + G +G G +++
Sbjct: 65 GADIKEMADLTFADAFT--ADFFATWGKLAAVR----TPTIAAVAGYALGGGCELAMMCD 118
Query: 161 YRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEY-LALTGEKLNGVEMIACGLAT 219
+ D F PE ++G P G S L+ G L LTG ++ E GL +
Sbjct: 119 VLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVS 178
Query: 220 H 220
Sbjct: 179 R 179
>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 278
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Query: 41 DQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCS 100
+ +LVE + LNRP LNALN+ ++ + +++PDIG +++ G+ +AF +
Sbjct: 25 ETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAA 84
Query: 101 GGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGM 160
G D+ + L F +FF T + ++ P +A + G +G G +++
Sbjct: 85 GADIKEMADLTFADAFT--ADFFATWGKLAAVR----TPTIAAVAGYALGGGCELAMMCD 138
Query: 161 YRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEY-LALTGEKLNGVEMIACGLAT 219
+ D F PE ++G P G S L+ G L LTG ++ E GL +
Sbjct: 139 VLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVS 198
Query: 220 HYT-----LNGVRYTALYFT 234
L R TA +
Sbjct: 199 RVVPADDLLTEARATATTIS 218
>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|B Chain B, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|C Chain C, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 265
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 4/186 (2%)
Query: 42 QVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSG 101
++LVE +NRP NAL+T+MV + ++ + + I ++ GAG A+C G
Sbjct: 10 ELLVERDGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVG 69
Query: 102 GDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMY 161
GD+ + ++ +G T+ + + L T KP +A ++G +G G + Q
Sbjct: 70 GDLSDGW-MVRDGSAPPLDP--ATIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDI 126
Query: 162 RVVTDKTVFSNPETQMGFHPDAGASFYLS-HLPGYLGEYLALTGEKLNGVEMIACGLATH 220
RV + F PE Q G P AG+ L +P + LTGE L E GL H
Sbjct: 127 RVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPLTAFEAYHFGLVGH 186
Query: 221 YTLNGV 226
G
Sbjct: 187 VVPAGT 192
>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|B Chain B, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|C Chain C, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|D Chain D, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|E Chain E, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|F Chain F, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
Length = 254
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 40 QDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFC 99
QD VLV LNRP LNA+ ++ L + EE+ ++ +L+ GAGRAF
Sbjct: 7 QDGVLV--------LTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFS 58
Query: 100 SGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQG 159
+G D+ + D++ + V KP V ++G+ G G ++L G
Sbjct: 59 AGQDLTEFGD-----RKPDYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWG 113
Query: 160 MYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGL 217
R+ F+ ++G PD+G SF L L G + L L +L+ E +A GL
Sbjct: 114 DLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGL 172
>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
Length = 255
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
L+RP LNA++T M+ L E + + VL+ GAGRAFCSGGD+
Sbjct: 21 LDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDT------ 74
Query: 116 FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPET 175
+ + V + KP +A + G +G G ++L V + F T
Sbjct: 75 ----AGAADAANRVVRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFT 130
Query: 176 QMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLATHYT 222
++G PD GAS L L G +A+T EK++ G+ +H T
Sbjct: 131 RVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHIT 178
>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|B Chain B, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|C Chain C, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|D Chain D, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|E Chain E, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|F Chain F, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
Length = 258
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIAL----YQLL 111
LNRP LNAL ++ L + E++EE+P +G +++ G +AF +G D+ + +Q
Sbjct: 20 LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDC 79
Query: 112 NEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFS 171
GKF L + ++ KP +A ++G +G G +++ +K F
Sbjct: 80 YSGKF---------LSHWDHIT-RIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFG 129
Query: 172 NPETQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMIACGLATH 220
PE +G P AG + L+ G L + LTG++++ + GL +
Sbjct: 130 QPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSK 179
>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|B Chain B, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|C Chain C, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|D Chain D, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|E Chain E, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|F Chain F, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
Length = 260
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIAL----YQLL 111
LNRP LNAL ++ L + E++EE+P +G +++ G +AF +G D+ + +Q
Sbjct: 22 LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDC 81
Query: 112 NEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFS 171
GKF L + ++ KP +A ++G +G G +++ +K F
Sbjct: 82 YSGKF---------LSHWDHIT-RIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFG 131
Query: 172 NPETQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMIACGLATH 220
PE +G P AG + L+ G L + LTG++++ + GL +
Sbjct: 132 QPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSK 181
>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|B Chain B, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|C Chain C, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|D Chain D, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|E Chain E, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|F Chain F, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|2DUB|A Chain A, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|B Chain B, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|C Chain C, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|D Chain D, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|E Chain E, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|F Chain F, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
Length = 261
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIAL----YQLL 111
LNRP LNAL ++ L + E++EE+P +G +++ G +AF +G D+ + +Q
Sbjct: 23 LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDC 82
Query: 112 NEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFS 171
GKF L + ++ KP +A ++G +G G +++ +K F
Sbjct: 83 YSGKF---------LSHWDHIT-RIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFG 132
Query: 172 NPETQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMIACGLATH 220
PE +G P AG + L+ G L + LTG++++ + GL +
Sbjct: 133 QPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSK 182
>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From
Mycobacterium Marinum
Length = 256
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 50 KSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQ 109
+ R LNRP LNA N ++ + ++P + VL+ G+GR F +G D+ +
Sbjct: 15 RVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQA 74
Query: 110 LLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTV 169
+ + F + K F L + + F KP + ++G+ +G GA I ++
Sbjct: 75 RITDPNFSEGKFGFRGLIKAL---AGFPKPLICAVNGLGVGIGATILGYADLAFMSSTAR 131
Query: 170 FSNPETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGL 217
P T +G P+A +S+ L L G +L ++ E ++ E + GL
Sbjct: 132 LKCPFTSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWIDAEEALRMGL 180
>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|B Chain B, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|C Chain C, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|D Chain D, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|E Chain E, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|F Chain F, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
Length = 286
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 20/187 (10%)
Query: 43 VLVEGRAKSRAA---ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFC 99
++ E R K+ LNRP LNAL ++ L + + +EE+P +G +++ G +AF
Sbjct: 32 IIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTGGDKAFA 91
Query: 100 SGGDVIALYQLLNEGKFED-----FKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAG 154
+G D+ + L F+D F ++ L Q KP +A ++G G G
Sbjct: 92 AGADIKEMQNL----SFQDCYSSKFLKHWDHLTQ-------VKKPVIAAVNGYAFGGGCE 140
Query: 155 ISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMI 213
+++ +K F+ PE +G P AG + L+ G L + LTG++++ +
Sbjct: 141 LAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAK 200
Query: 214 ACGLATH 220
GL +
Sbjct: 201 QAGLVSK 207
>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From
Mycobacterium Marinum
Length = 278
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 6/190 (3%)
Query: 43 VLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGG 102
LVE R + +NRPS NAL+ M+ + ++ + +PDI ++ GAG FC+G
Sbjct: 22 ALVEQRGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGM 81
Query: 103 DVIALYQLLNEGKFEDFKNFFETLYQFVYLQG-TFVKPHVAILDGITMGCGAGISLQGM- 160
D+ A + F+D ++ L+G KP +A ++G + G I LQG
Sbjct: 82 DLKAATKKPPGDSFKD--GSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEI-LQGTD 138
Query: 161 YRVVTDKTVFSNPETQMGFHPDAGASFYL-SHLPGYLGEYLALTGEKLNGVEMIACGLAT 219
RV + F E + +P G++ L +P + L LTG + E GL
Sbjct: 139 IRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEMGLVG 198
Query: 220 HYTLNGVRYT 229
H +G T
Sbjct: 199 HVVPDGQALT 208
>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 276
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 3/176 (1%)
Query: 52 RAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLL 111
R LNRP +LN++N + L RL++ ++P ++ GAGRAF +GGD L +L
Sbjct: 39 RIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELS 98
Query: 112 NEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFS 171
+ + V P VA ++G +G G + + + +
Sbjct: 99 ADADLR--AKTIRDGREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLA 156
Query: 172 NPETQMGF-HPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNGV 226
+P Q+G D G + H+ L + ALTG +++ + GLA H + V
Sbjct: 157 DPHVQVGLVAADGGPLTWPLHISLLLAKEYALTGTRISAQRAVELGLANHVADDPV 212
>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|B Chain B, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|C Chain C, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
Length = 267
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 43 VLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSG 101
L E R +NRP NA+N ++ + E + +P++ V++ GAG ++FC+G
Sbjct: 11 ALAERRGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAG 70
Query: 102 GDVIALYQLLNEGKFEDFKNFFETLYQFV-YLQGTFVKPHVAILDGITMGCGAGISLQGM 160
D+ A+ + E+ + + F Y++ KP +A ++G +G G ++L
Sbjct: 71 ADLKAI------ARRENLYHPDHPEWGFAGYVRHFIDKPTIAAVNGTALGGGTELALASD 124
Query: 161 YRVVTDKTVFSNPETQMGFHPDAGASFYLS-HLPGYLGEYLALTGEKLNGVEMIACGL 217
V ++ F PE + G AG F ++ LP + L LTGE L+ GL
Sbjct: 125 LVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGL 182
>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|B Chain B, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|C Chain C, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
Length = 273
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 36 NDYLQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG 95
+ + +VE R ++RP NA+N ++ + E + +P++ V++ GAG
Sbjct: 10 TEVTRQAAVVERRGNVALITIDRPDARNAVNGAVSTAVGDALEEAQRDPEVWAVVITGAG 69
Query: 96 -RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFV-YLQGTFVKPHVAILDGITMGCGA 153
++FC+G D+ A+ + E+ + + F Y+ KP +A ++G +G G+
Sbjct: 70 DKSFCAGADLKAIS------RGENLYHAEHPEWGFAGYVHHFIDKPTIAAVNGTALGGGS 123
Query: 154 GISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYL-SHLPGYLGEYLALTGEKLNGVEM 212
++L + + F PE + G AG F + LP + L LTGE + +
Sbjct: 124 ELALASDLVIACESASFGLPEVKRGLIAGAGGVFRIVEQLPRKVALELVLTGEPMTASDA 183
Query: 213 IACGLATHYTLNG 225
+ GL +G
Sbjct: 184 LRWGLINEVVPDG 196
>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) From Geobacillus Kaustophilus Hta426
pdb|2QQ3|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|G Chain G, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|H Chain H, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|I Chain I, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|J Chain J, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|K Chain K, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|L Chain L, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
Length = 258
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
L RP LNAL+ MV + E+++ N + +++ G GRAF +G D+ + +
Sbjct: 20 LARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAK------ 73
Query: 116 FEDFKNFFETLYQFV-YLQGTFVK-PHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNP 173
D E L QF + + + VK P +A ++G+ +G G ++L V + F P
Sbjct: 74 --DDPIRLEWLNQFADWDRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFP 131
Query: 174 ETQMGFHPDAGASFYLSHL--PGYLGEYLALTGEKLNGVEMIACGLATHYT 222
E +G P AG + L+ L P E+L TG +++ E G+
Sbjct: 132 EVNLGVMPGAGGTQRLTKLIGPKRALEWL-WTGARMSAKEAEQLGIVNRVV 181
>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|B Chain B, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|C Chain C, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
Length = 267
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 43 VLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSG 101
L E R +NRP NA+N ++ + E + +P++ V++ GAG ++FC+G
Sbjct: 11 ALAERRGNVMVITINRPEARNAVNAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAG 70
Query: 102 GDVIALYQLLNEGKFEDFKNFFETLYQFV-YLQGTFVKPHVAILDGITMGCGAGISLQGM 160
D+ A+ + E+ + + F Y++ KP +A ++G +G G ++L
Sbjct: 71 ADLKAI------ARRENLYHPDHPEWGFAGYVRHFIDKPTIAAVNGTALGGGTELALASD 124
Query: 161 YRVVTDKTVFSNPETQMGFHPDAGASFYLS-HLPGYLGEYLALTGEKLNGVEMIACGL 217
V ++ F PE + G AG F ++ LP + L LTGE L+ GL
Sbjct: 125 LVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGL 182
>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
pdb|2EJ5|B Chain B, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
Length = 257
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
LNRP LNA M + + + +P++ V++ GAGRAFC+G D+ + + ++ G
Sbjct: 18 LNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGD 77
Query: 116 FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPET 175
++ + + + ++ KP VA ++G G G ++L +R++++K F+
Sbjct: 78 V--LRSRYAPMMKALH---HLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFI 132
Query: 176 QMGFHPDAGASFYLSHLPGYLGEY-LALTGEKLN 208
+G PDAG +YL L G LA+ GEK+
Sbjct: 133 HVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVT 166
>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 274
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
LNRP LNAL+ M+ L+ Y E + + +++ G GRAFCSG DV ++ +GK
Sbjct: 26 LNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADV---KEIPEDGK 82
Query: 116 FEDFKNFFETLYQFVYLQG------TFVKPHVAILDGITMGCGAGISLQGMYRVV--TDK 167
+ + T Q+ Q T KP + ++GI CGAG+ +V +++
Sbjct: 83 VIYERPYLSTYDQWEAPQEGTPPFRTMAKPVLTAVNGIC--CGAGMDWVTTTDIVIASEQ 140
Query: 168 TVFSNPETQMGF 179
F +P +G
Sbjct: 141 ATFFDPHVSIGL 152
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
L+ PS N+ + +L Y+ +++P + +++ GA AFCSG + A + +
Sbjct: 22 LHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPR 81
Query: 116 FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPET 175
DF F P +A ++G +G G ++L R++ ++ ++ P+
Sbjct: 82 NPDFSASPVQPAAF-----ELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQV 136
Query: 176 QMGFHPDAGASFYLSHLPG-YLGEYLALTGEKLNGVEMIACGLA 218
+ G PDA A + L L G + L LTG + + GLA
Sbjct: 137 RFGVAPDALAHWTLPRLVGTAVAAELLLTGASFSAQRAVETGLA 180
>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycob Smegmatis
Length = 263
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLL-NEG 114
L+RP LNALN ++ + ++ + +IG +++ G+ RAF +G D+ + L ++
Sbjct: 25 LDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQA 84
Query: 115 KFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
+ + + +++L Q KP VA + G +G G +++ + D F PE
Sbjct: 85 RERNLLSGWDSLTQ-------VRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPE 137
Query: 175 TQMGFHPDAGASFYLSHLPGYLGEY-LALTGEKLNGVEMIACGLATH 220
+G P G + L+ G L LTG L E GL +
Sbjct: 138 ITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSR 184
>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|B Chain B, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|C Chain C, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
Length = 280
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
NRP NA+NT + R ++ ++ I ++ G G + SG D+ + G
Sbjct: 41 FNRPKKKNAINTEXYHEIXRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGV 99
Query: 116 FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVV--TDKTVFSNP 173
E KN L +FV F KP +A+++G +G ++L G++ V +D+ F P
Sbjct: 100 EEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGI--SVTLLGLFDAVYASDRATFHTP 157
Query: 174 ETQMGFHPDAGASFYLSHL--PGYLGEYLALTGEKLNGVEMIACGLATH 220
+ +G P+ +S+ + P E L + G+KL E A GL T
Sbjct: 158 FSHLGQSPEGCSSYTFPKIXSPAKATEXL-IFGKKLTAGEACAQGLVTE 205
>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|B Chain B, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 258
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
LNRP+ NALN +++ +L E+ + I ++ G R F +G D LNE
Sbjct: 20 LNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGAD-------LNEMA 72
Query: 116 FEDF-KNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
+D +T Q F KP +A ++G +G G ++L V + F PE
Sbjct: 73 EKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPE 132
Query: 175 TQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMIACGLAT 219
+G P AG + L G L + L+GE + + GL +
Sbjct: 133 ITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVS 178
>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus
Thermophilus Hb8
Length = 253
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
LN P N L+ L + + E +P + V++ G G+AF +G D+ L ++ G
Sbjct: 14 LNDPERRNPLSPEXALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGA 73
Query: 116 FEDFKNFFE--TLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNP 173
E++++ L+ VY T+ KP VA ++G + GAG++L V ++
Sbjct: 74 EENYRHSLSLXRLFHRVY---TYPKPTVAAVNGPAVAGGAGLALACDLVVXDEEARLGYT 130
Query: 174 ETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGLATHYTLNG 225
E ++GF + + + + L LTG + E A GL G
Sbjct: 131 EVKIGFVAALVSVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRIAPPG 182
>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|B Chain B, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|C Chain C, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|D Chain D, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|E Chain E, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|F Chain F, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
Length = 266
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 23/173 (13%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
+NRP NAL + + + + ++N D+ V+++GA F +G D+
Sbjct: 20 INRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDM----------- 68
Query: 116 FEDFKNFFET--------LYQFVYLQGT--FVKPHVAILDGITMGCGAGISLQGMYRVVT 165
+DF F + + FV L+ KP + + G+ +G G I LQ
Sbjct: 69 -KDFMGFVQNPNAGPAGQVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFAD 127
Query: 166 DKTVFSNPETQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMIACGL 217
+ +F P +G P+ GAS L GY L T +K N + GL
Sbjct: 128 NTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGL 180
>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|B Chain B, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|D Chain D, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
ILNRP NA++ ++ + + E+ E++P G +++ GAG A+ +G D+ ++ ++ G
Sbjct: 23 ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 115 K--FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
++ + +Q+ L+ + KP +A+++G G G + + D+ F
Sbjct: 83 PEILQEKIRREASQWQWKLLR-MYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGL 141
Query: 173 PETQMGFHPDAGASFYLSHLPGYLGE-YLALTGEKLNGVEMIACGLATH 220
E G P S ++ G+ Y +TG+ G + GL
Sbjct: 142 SEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 39 LQDQVLVEG-RAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRA 97
+ D++L+ + R LNRP NAL+ ++ R E + D+ V++ GA
Sbjct: 5 MTDEILLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPV 64
Query: 98 FCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISL 157
FC+G D L +L D + L KP + ++G + G ++L
Sbjct: 65 FCAGLD---LKELGGSSALPDISPRWPAL----------TKPVIGAINGAAVTGGLELAL 111
Query: 158 QGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMIACG 216
+ ++ F++ ++G P G S L G L ++LTG+ L+ + + G
Sbjct: 112 YCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAG 171
Query: 217 LATHY 221
L T
Sbjct: 172 LVTEV 176
>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
ILNRP NA++ ++ + + E+ E++P G +++ GAG A+ +G D+ ++ ++ G
Sbjct: 23 ILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 115 K--FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
++ + +Q+ L+ + KP +A+++G G G + + D+ F
Sbjct: 83 PEILQEKIRREASQWQWKLLR-MYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGL 141
Query: 173 PETQMGFHPDAGASFYLSHLPGYLGE-YLALTGEKLNGVEMIACGLATH 220
E G P S ++ G+ Y +TG+ G + GL
Sbjct: 142 SEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 275
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
ILNRP NA++ ++ + + E+ E++P G +++ GAG A+ +G D+ ++ ++ G
Sbjct: 23 ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 115 K--FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
++ + +Q+ L+ + KP +A+++G G G + + D+ F
Sbjct: 83 PEILQEKIRREASQWQWKLLR-MYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGL 141
Query: 173 PETQMGFHPDAGASFYLSHLPGYLGE-YLALTGEKLNGVEMIACGLATH 220
E G P S ++ G+ Y +TG+ G + GL
Sbjct: 142 SEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium
Avium
Length = 270
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 39 LQDQVLVEG-RAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRA 97
+ D++L+ + R LNRP NAL+ ++ R E + D+ V++ GA
Sbjct: 22 MTDEILLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPV 81
Query: 98 FCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISL 157
FC+G D L +L D + L KP + ++G + G ++L
Sbjct: 82 FCAGLD---LKELGGSSALPDISPRWPAL----------TKPVIGAINGAAVTGGLELAL 128
Query: 158 QGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMIACG 216
+ ++ F++ ++G P G S L G L ++LTG+ L+ + + G
Sbjct: 129 YCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAG 188
Query: 217 LATHY 221
L T
Sbjct: 189 LVTEV 193
>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
ILNRP NA++ ++ + + E+ E++P G +++ GAG A+ +G D+ ++ ++ G
Sbjct: 23 ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 115 K--FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
++ + +Q+ L+ + KP +A+++G G G + + D+ F
Sbjct: 83 PEILQEKIRREASQWQWKLLR-MYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGL 141
Query: 173 PETQMGFHPDAGASFYLSHLPGYLGE-YLALTGEKLNGVEMIACGLATH 220
E G P S ++ G+ Y +TG+ G + GL
Sbjct: 142 SEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|C Chain C, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|D Chain D, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|E Chain E, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|F Chain F, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|G Chain G, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|H Chain H, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|J Chain J, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|K Chain K, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|L Chain L, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2VSS|A Chain A, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|B Chain B, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|C Chain C, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|D Chain D, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
ILNRP NA++ ++ + + E+ E++P G +++ GAG A+ +G D+ ++ ++ G
Sbjct: 23 ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 115 K--FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
++ + +Q+ L+ + KP +A+++G G G + + D+ F
Sbjct: 83 PEILQEKIRREASQWQWKLLR-MYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGL 141
Query: 173 PETQMGFHPDAGASFYLSHLPGYLGE-YLALTGEKLNGVEMIACGLATH 220
E G P S ++ G+ Y +TG+ G + GL
Sbjct: 142 SEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
ILNRP NA++ ++ + + E+ E++P G +++ GAG A+ +G D+ ++ ++ G
Sbjct: 23 ILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 115 K--FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
++ + +Q+ L+ + KP +A+++G G G + + D+ F
Sbjct: 83 PEILQEKIRREASQWQWKLLR-MYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGL 141
Query: 173 PETQMGFHPDAGASFYLSHLPGYLGE-YLALTGEKLNGVEMIACGLATH 220
E G P S ++ G+ Y +TG+ G + GL
Sbjct: 142 SEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
ILNRP NA++ ++ + + E+ E++P G +++ GAG A+ +G D+ ++ ++ G
Sbjct: 23 ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 115 K--FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
++ + +Q+ L+ + KP +A+++G G G + + D+ F
Sbjct: 83 PEILQEKIRREASQWQWKLLR-MYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGL 141
Query: 173 PETQMGFHPDAGASFYLSHLPGYLGE-YLALTGEKLNGVEMIACGLATH 220
E G P S ++ G+ Y +TG+ G + GL
Sbjct: 142 SEINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
ILNRP NA++ ++ + + E+ E++P G +++ GAG A+ +G D+ ++ ++ G
Sbjct: 23 ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 115 K--FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
++ + +Q+ L+ + KP +A+++G G G + + D+ F
Sbjct: 83 PEILQEKIRREASQWQWKLLR-MYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGL 141
Query: 173 PETQMGFHPDAGASFYLSHLPGYLGE-YLALTGEKLNGVEMIACGLATH 220
E G P S ++ G+ Y +TG+ G + GL
Sbjct: 142 SEINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase
pdb|1DCI|B Chain B, Dienoyl-Coa Isomerase
pdb|1DCI|C Chain C, Dienoyl-Coa Isomerase
Length = 275
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 15/177 (8%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
LNRP NA+N + L ++ ++ D V++ GAG+ F SG D++ + + +
Sbjct: 19 LNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPP 78
Query: 116 FEDFKNFFETLYQFV-YLQGTFV------KPHVAILDGITMGCGAGISLQGMYRVVTDKT 168
+D L + Q TF KP +A + G +G G + R T
Sbjct: 79 GDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDA 138
Query: 169 VFSNPETQMGFHPDAGASFYLSHLPGYLGEY-----LALTGEKLNGVEMIACGLATH 220
F E +G D G L LP +G L T K+ E + GL +
Sbjct: 139 FFQVKEVDVGLAADVGT---LQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSR 192
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
ILNRP NA++ ++ + + E+ E++P G +++ GAG A+ +G D+ ++ ++ G
Sbjct: 23 ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 115 K--FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
++ + +Q+ L+ + KP +A+++G G G + + D+ F
Sbjct: 83 PEILQEKIRREASQWQWKLLR-MYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGL 141
Query: 173 PETQMGFHPDAGASFYLSHLPGYLGEYL-ALTGEKLNGVEMIACGLATH 220
E G P S ++ G+ + +TG+ G + GL
Sbjct: 142 SEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNE 190
>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 256
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 39 LQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAF 98
+ D+VL+E R + +NRP NA+N ++ L + + + D+ ++ GAG F
Sbjct: 5 MADEVLIEQRDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNF 64
Query: 99 CSGGDVIALYQ---LLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGI 155
C+G D+ A +L+E + F N KP +A ++G + G +
Sbjct: 65 CAGMDLKAFVSGEAVLSE-RGLGFTNVPPR------------KPIIAAVEGFALAGGTEL 111
Query: 156 SLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYL-SHLPGYLGEYLALTGE 205
L V F PE + G AG L + +P + LALTGE
Sbjct: 112 VLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGE 162
>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|B Chain B, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|C Chain C, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
Length = 296
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 69/177 (38%), Gaps = 15/177 (8%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
LNRP+ NA+N + + + D V++ GAG+ F +G D++ + + + K
Sbjct: 46 LNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPK 105
Query: 116 FEDFKNFFETLYQFVY-LQGTF------VKPHVAILDGITMGCGAGISLQGMYRVVTDKT 168
+D L + Q TF KP +A + G +G G + R
Sbjct: 106 GDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDA 165
Query: 169 VFSNPETQMGFHPDAGASFYLSHLPGYLGEY-----LALTGEKLNGVEMIACGLATH 220
F E +G D G L LP +G LA T K+ E + GL +
Sbjct: 166 FFQVKEVDVGLAADVGT---LQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSR 219
>pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
Length = 272
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNE- 113
+L+ P LN++ M L ++ + +PD+ VL++G G+AF SGG ++L++E
Sbjct: 28 VLDSP-GLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGS----FELIDET 82
Query: 114 -GKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
G +E V KP V+ + G +G G ++L V + +
Sbjct: 83 IGDYEGRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIID 142
Query: 173 PETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLAT 219
T++G A+ L G +Y LT E L+G E GL +
Sbjct: 143 GHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLSGEEAERIGLVS 190
>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|E Chain E, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|F Chain F, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis
Length = 265
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGDVIALYQLLNEG 114
LNR N+L+ +++ L+ + E + V++ GAG +AFC+G D + NE
Sbjct: 24 LNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGAD-LKERAGXNEE 82
Query: 115 KFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
+ + T + V +P +A ++GI +G G +SL +R+ + E
Sbjct: 83 QVRHAVSXIRTTXEXVE---QLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTE 139
Query: 175 TQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMIACGL 217
T + P AG + L L G + L TG +++ E GL
Sbjct: 140 TTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGL 183
>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 267
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
LN P N NAL+T++V +L + +P + V++ G FC+G D L + + G
Sbjct: 26 LNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGAD---LSEAGSGGS 82
Query: 116 FED-FKNFFETLYQFVYLQGTFVK---PHVAILDGITMGCGAGISLQGMYRVVTDKTVFS 171
+ E + L V+ P +A +DG G G+ V ++ F+
Sbjct: 83 PSSAYDMAVERAREMAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFA 142
Query: 172 NPETQMGFHPDAGASFYLSHLPGYLGEYLA---LTGEKLNGVEMIACGLAT 219
E ++G P A L+ LP A LTGEK + GL T
Sbjct: 143 LTEARIGVAP---AIISLTLLPKLSARAAARYYLTGEKFDARRAEEIGLIT 190
>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 264
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 11/164 (6%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
L RP NALN+ +V L + + VL G G AFC+G D L +
Sbjct: 36 LQRPERRNALNSQLVEELTQAIRKAGDGSARAIVL-TGQGTAFCAGAD------LSGDAF 88
Query: 116 FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPET 175
D+ + L++ + P V ++G +G G +++Q RVV F P +
Sbjct: 89 AADYPDRLIELHKAM---DASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTS 145
Query: 176 QMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMIACGLA 218
+ G D + LS L G+ + L+ EKL + G+A
Sbjct: 146 KYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMA 189
>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 59 PSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFED 118
P + NAL+ + + EE+ +G V++ GA AFC+G L ++ +
Sbjct: 21 PRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAG---FYLREIPLDKGVAG 77
Query: 119 FKNFFET----LYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
++ F +Q ++ +P +A ++G+ G G GISL + D F
Sbjct: 78 VRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAW 137
Query: 175 TQMGFHPDAGASFYLSHLPG 194
+G D S+ L+ + G
Sbjct: 138 HTIGIGNDTATSYSLARIVG 157
>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
pdb|1NZY|C Chain C, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 59 PSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFED 118
P + NAL+ + + EE+ +G V++ GA AFC+G L ++ +
Sbjct: 21 PRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAG---FYLREIPLDKGVAG 77
Query: 119 FKNFFET----LYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
++ F +Q ++ +P +A ++G+ G G GISL + D F
Sbjct: 78 VRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAW 137
Query: 175 TQMGFHPDAGASFYLSHLPG 194
+G D S+ L+ + G
Sbjct: 138 HTIGIGNDTATSYSLARIVG 157
>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
Length = 286
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
LNRP NAL+ +M+ L + + E+ + V++ +G+AFC+G D L ++ E
Sbjct: 41 LNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHD---LKEMRAEPS 97
Query: 116 FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCG 152
E ++ F + P +A + GI G
Sbjct: 98 REYYEKLFARCTDVMLAIQRLPAPVIARVHGIATAAG 134
>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
Length = 261
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 16/177 (9%)
Query: 54 AILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNE 113
A LN + NA ++ + + L + E++ +I V++ G GR F +G D+ +
Sbjct: 19 ATLNH-APANAXSSQVXHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEA 77
Query: 114 GKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNP 173
+ + + ++ V KP +A + G +G G + R T+ P
Sbjct: 78 KQATELAQLGQVTFERVE---KCSKPVIAAIHGAALGGGLEFAXSCHXRFATESAKLGLP 134
Query: 174 ETQMGFHPDAGASFYLSHLPGYLGEYLA----LTGEKLNGVEMIACGLATHYTLNGV 226
E +G P + LP Y+G+ A LT + G E + GL +NGV
Sbjct: 135 ELTLGLIPGFAGT---QRLPRYVGKAKACEXXLTSTPITGAEALKWGL-----VNGV 183
>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|B Chain B, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|C Chain C, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|D Chain D, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|E Chain E, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|F Chain F, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|G Chain G, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|H Chain H, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|I Chain I, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 3/166 (1%)
Query: 52 RAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLL 111
R +L+ P N L+ +M+ L+ ++ D+ +++ G F SG D L +L
Sbjct: 44 RNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHD---LKELT 100
Query: 112 NEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFS 171
E + F+T + + P +A+++G+ G + V +DK+ F+
Sbjct: 101 EEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFA 160
Query: 172 NPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGL 217
P +G +P + + TGE ++ E + GL
Sbjct: 161 TPGVNVGLFCSTPGVALARAVPRKVALEMLFTGEPISAQEALLHGL 206
>pdb|2A7K|A Chain A, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|B Chain B, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|C Chain C, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|D Chain D, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|E Chain E, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|F Chain F, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|G Chain G, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|H Chain H, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|I Chain I, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A81|A Chain A, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|B Chain B, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|C Chain C, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
Length = 250
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 43 VLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDI-GFVLMKGAGRAFCSG 101
V E + R L+ P+ N + ++ +K + + V+ GA R+F +G
Sbjct: 2 VFEENSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAG 61
Query: 102 GDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMY 161
GD + QL E++ + LYQ V KP +A +DG +G G +L
Sbjct: 62 GDFNEVKQLSRSEDIEEWIDRVIDLYQAVL---NVNKPTIAAVDGYAIGMGFQFALMFDQ 118
Query: 162 RVVTDKTVFSNPETQMGFHPDAGASF 187
R++ F PE + G GA+
Sbjct: 119 RLMASTANFVMPELKHGIGCSVGAAI 144
>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 290
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 9/172 (5%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
LNRP +NA+ ++ K++ + D+ V++ GAG+ FCSG D + + + G
Sbjct: 39 LNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGG 98
Query: 116 FEDFK---NFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
E L + + +P +A ++G +G G ++L RV + F
Sbjct: 99 LTQPTIALRSMELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRA 158
Query: 173 PETQMGFHPDAGASFYLSHLPGYLGEYLA----LTGEKLNGVEMIACGLATH 220
G YL LP +G A LTG ++ E GL +
Sbjct: 159 AGINNGLTASELGLSYL--LPRAIGTSRASDIMLTGRDVDADEAERIGLVSR 208
>pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
Length = 265
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 36 NDYLQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG 95
N + +VLVE R + +NRP N++N ++ L + + + + ++ GAG
Sbjct: 10 NGDTEPEVLVEQRDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAG 69
Query: 96 RAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGI 155
+FC+G D+ A F +N + + KP +A ++G + G +
Sbjct: 70 GSFCAGMDLKA---------FARGENVVVEGRGLGFTERPPAKPLIAAVEGYALAGGTEL 120
Query: 156 SLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSH-LPGYLGEYLALTGEKLNGVEMIA 214
+L V + F PE + G G L +P + LALTG+ L+ A
Sbjct: 121 ALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNLSAERAHA 180
Query: 215 CGL 217
G+
Sbjct: 181 LGM 183
>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|B Chain B, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|C Chain C, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
Length = 269
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Query: 59 PSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFED 118
P + NAL+ + + EE+ +G V++ GA AFC+G L ++ +
Sbjct: 21 PRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAG---FYLREIPLDKGVAG 77
Query: 119 FKNFFET----LYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
++ F Q ++ +P +A ++G+ G G GISL + D F
Sbjct: 78 VRDHFRIAALWWQQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAW 137
Query: 175 TQMGFHPDAGASFYLSHLPG 194
+G D S+ L+ + G
Sbjct: 138 HTIGIGNDTATSYSLARIVG 157
>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|D Chain D, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 274
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 3/156 (1%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
LNRP LN+ N M +L + E + I +L+ GAGR FC+G D + + G
Sbjct: 30 LNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQD-LNDRNVDPTGP 88
Query: 116 FEDFKNFFETLYQ-FVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
D E Y V KP + ++G+ G GA ++L G + F
Sbjct: 89 APDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAF 148
Query: 175 TQMGFHPDAGASFYLSHLPGYLGEY-LALTGEKLNG 209
+++G PD G ++ L + G LAL G +L+
Sbjct: 149 SKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSA 184
>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 256
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 14/179 (7%)
Query: 43 VLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGG 102
+LV+ + R LNRP + NAL+ + R + + D+ V++ GA FC+G
Sbjct: 11 LLVDTTDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGL 70
Query: 103 DVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYR 162
D L +L + + D + + KP + ++G + G ++L
Sbjct: 71 D---LKELGDTTELPDISPKWPDM----------TKPVIGAINGAAVTGGLELALYCDIL 117
Query: 163 VVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMIACGLATH 220
+ ++ F++ ++G P G S L G L ++LTG+ L+ + + GL T
Sbjct: 118 IASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTE 176
>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
pdb|3HIN|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
Length = 275
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 9/175 (5%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPD-IGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
LNRP NALN ++ LK + + PD I V++ G G F +G D+ L +
Sbjct: 31 LNRPKKRNALNDGLMAALK---DCLTDIPDQIRAVVIHGIGDHFSAGLDLSELRERDATE 87
Query: 115 KFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
+ + + Y + P +A L G +G G ++ RV ++ PE
Sbjct: 88 GLVHSQTWHRVFDKIQYCR----VPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPE 143
Query: 175 TQMGFHPDAGASFYLSHLPGYLG-EYLALTGEKLNGVEMIACGLATHYTLNGVRY 228
G G S L L G + LTG + E + G + + NG Y
Sbjct: 144 GSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVYSAAEGVVHGFSQYLIENGSAY 198
>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
Length = 261
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 69/197 (35%), Gaps = 25/197 (12%)
Query: 39 LQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAF 98
+ D V VE I+NRP NA+N L + ++ + ++ G G F
Sbjct: 6 VSDLVQVERNGPVTTVIINRPQARNAVNGPTAAALYSAFAEFDRDESASVAVLCGNGGTF 65
Query: 99 CSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGT---------FVKPHVAILDGITM 149
C+G D K F V+ G KP +A + G +
Sbjct: 66 CAGAD---------------LKAFGTAEANAVHRTGPGPMGPSRMMLSKPVIAAVSGYAV 110
Query: 150 GCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEY-LALTGEKLN 208
G ++L RV VF + G G + L L G+ + LTG +
Sbjct: 111 AGGLELALWCDLRVAEQDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRAVQ 170
Query: 209 GVEMIACGLATHYTLNG 225
E +A GLA NG
Sbjct: 171 ADEALAIGLANRVVPNG 187
>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 715
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 12/157 (7%)
Query: 60 SNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDF 119
++N N + L++ ++ + + + V++ F G D+ + E
Sbjct: 27 ESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAELI 86
Query: 120 KNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGF 179
E F + V P VA ++GI +G G + L +RV+ D PE ++G
Sbjct: 87 AGNLEANKIFSDFEDLNV-PTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGI 145
Query: 180 HPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACG 216
+P G + L L G N VE IA G
Sbjct: 146 YPGFGGTVRLPRLIGV-----------DNAVEWIASG 171
>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|B Chain B, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|C Chain C, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
Length = 272
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGA-GRAFCSGGDVIALYQLLNEG 114
+NRP NA V + + ++ +IG +++ GA G+AFCSGGD ++ G
Sbjct: 27 INRPEVHNAFRPKTVNEMIDAFTKARDDSNIGVIILTGAGGKAFCSGGD----QKVRGHG 82
Query: 115 KF--EDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
+ ED L L KP +A++ G +G G + + + D +F
Sbjct: 83 GYVGEDEIPRLNVL-DLQRLIRVIPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQ 141
Query: 173 PETQMGFHPDAGASFYLSHLPGY 195
++G + YL+ + G+
Sbjct: 142 TGPKVGSFDGGYGAGYLARIVGH 164
>pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|B Chain B, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|C Chain C, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|D Chain D, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|E Chain E, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|F Chain F, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
Length = 275
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 11/147 (7%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGR------AFCSGGDVIALY 108
++NRP NA V L + + E+ IG VL+ GAG AFCSGGD
Sbjct: 24 VINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGD----Q 79
Query: 109 QLLNEGKFEDFKNFFE-TLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDK 167
+ EG + D + + L + K +A++ G +G G + L + D
Sbjct: 80 SVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADN 139
Query: 168 TVFSNPETQMGFHPDAGASFYLSHLPG 194
+F ++G S YL+ + G
Sbjct: 140 AIFGQTGPKVGSFDGGFGSSYLARIVG 166
>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELW|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELX|A Chain A, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|B Chain B, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|C Chain C, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|D Chain D, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|E Chain E, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|F Chain F, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
Length = 285
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGD--VIALYQLLN 112
+NRP NA V + + + +IG +++ GAG +AFCSGGD V Y
Sbjct: 39 INRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDY---- 94
Query: 113 EGKFEDFKNFFE-TLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFS 171
G ++D + F T KP VA++ G ++G G + + + D +F
Sbjct: 95 -GGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFG 153
Query: 172 NPETQMGFHPDAGASFYLSHLPG 194
++G + Y++ + G
Sbjct: 154 QTGPKVGSFDGGWGASYMARIVG 176
>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|B Chain B, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|C Chain C, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|D Chain D, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|E Chain E, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|F Chain F, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T89|A Chain A, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|B Chain B, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|C Chain C, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|D Chain D, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|E Chain E, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|F Chain F, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
Length = 289
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGD--VIALYQLLN 112
+NRP NA V + + + +IG +++ GAG +AFCSGGD V Y
Sbjct: 43 INRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDY---- 98
Query: 113 EGKFEDFKNFFE-TLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFS 171
G ++D + F T KP VA++ G ++G G + + + D +F
Sbjct: 99 -GGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFG 157
Query: 172 NPETQMGFHPDAGASFYLSHLPG 194
++G + Y++ + G
Sbjct: 158 QTGPKVGSFDGGWGASYMARIVG 180
>pdb|1HNO|A Chain A, Crystal Structure Of Peroxisomal Delta3-delta2-enoyl-coa
Isomerase From Saccharomyces Cerevisiae
pdb|1HNU|A Chain A, Crystal Structure Of Peroxisomal Delta3-Delta2-Enoyl-Coa
Isomerase From Saccharomyces Cerevisiae
pdb|1K39|A Chain A, The Structure Of Yeast Delta3-delta2-enoyl-coa Isomerase
Complexed With Octanoyl-coa
pdb|1K39|B Chain B, The Structure Of Yeast Delta3-delta2-enoyl-coa Isomerase
Complexed With Octanoyl-coa
pdb|1K39|C Chain C, The Structure Of Yeast Delta3-delta2-enoyl-coa Isomerase
Complexed With Octanoyl-coa
pdb|1PJH|A Chain A, Structural Studies On Delta3-Delta2-Enoyl-Coa Isomerase:
The Variable Mode Of Assembly Of The Trimeric Disks Of
The Crotonase Superfamily
pdb|1PJH|B Chain B, Structural Studies On Delta3-Delta2-Enoyl-Coa Isomerase:
The Variable Mode Of Assembly Of The Trimeric Disks Of
The Crotonase Superfamily
pdb|1PJH|C Chain C, Structural Studies On Delta3-Delta2-Enoyl-Coa Isomerase:
The Variable Mode Of Assembly Of The Trimeric Disks Of
The Crotonase Superfamily
Length = 280
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 8/139 (5%)
Query: 59 PSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDV--IALYQLLNEGKF 116
P NLNAL L L E + N D+ F +++ +GR F SG D IA Q + K+
Sbjct: 27 PDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKY 86
Query: 117 --EDFKNFFETLYQFVYLQGTFVKPH---VAILDGITMGCGAG-ISLQGMYRVVTDKTVF 170
E K + + VY+ F+K + L+G +G A ++L + + DK
Sbjct: 87 PSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYL 146
Query: 171 SNPETQMGFHPDAGASFYL 189
P +G + G + L
Sbjct: 147 LYPFANLGLITEGGTTVSL 165
>pdb|3Q1T|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 278
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 8/168 (4%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNE- 113
+L+ P LN++ M L ++ + +P + VL++G G+AF SGG + L++E
Sbjct: 34 VLDSP-GLNSVGPQMHRDLADIWPVIDRDPAVRAVLVRGEGKAFSSGGS----FDLIDET 88
Query: 114 -GKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSN 172
G ++ V+ P V+ + G +G G ++L V +
Sbjct: 89 IGDYQGRIRIMREARDLVHNMINCDTPVVSAIRGPAVGAGLVVALLADISVAGRTAKLID 148
Query: 173 PETQMGFHPDAGASFYLSHLPGYL-GEYLALTGEKLNGVEMIACGLAT 219
T++G A+ L G +Y LT E L G E GL +
Sbjct: 149 GHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLLGEEAERIGLVS 196
>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From
Mycobacterium Marinum
Length = 298
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 67/173 (38%), Gaps = 11/173 (6%)
Query: 31 PDYSSNDYLQDQVLVEGRAKSRAAI-LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFV 89
P S QD VL E A I NR LNA + + E +P I +
Sbjct: 19 PGSMSAADAQDAVLYEATPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVI 78
Query: 90 LMKGAGRAFCSG-----GDVIALY-QLLNEGKFEDFKNFF-ETLYQFVYLQGTFVKPHVA 142
++ G GR FC+G D A Y + + + K + + E FV + KP +A
Sbjct: 79 VLTGRGRGFCAGAYLGSADAAAGYDKTMAKAKDANLADLVGERPPHFVTM---LRKPVIA 135
Query: 143 ILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY 195
++G +G G +L R F+ + G + G S+ L L +
Sbjct: 136 AINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSW 188
>pdb|1RJM|A Chain A, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|B Chain B, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|C Chain C, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJN|A Chain A, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|B Chain B, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|C Chain C, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
Length = 339
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKG-------AGRAFCSGGD 103
NRP NA V L R+ + +PD+G VL+ G G AFCSGGD
Sbjct: 77 FNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD 131
>pdb|1Q51|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q52|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
Length = 314
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKG-------AGRAFCSGGD 103
NRP NA V L R+ + +PD+G VL+ G G AFCSGGD
Sbjct: 52 FNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD 106
>pdb|3NJB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJD|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3NJD|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 333
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 57 NRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIAL--------- 107
NRP NA+ L L E + +PD+ +L+ G G FC+G D+ A
Sbjct: 51 NRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGG 110
Query: 108 ------------YQLLNEGKFEDFKNF--FETLYQFVYLQGTFV---KPHVAILDGITMG 150
Q LN E + ++ + +FV + + KP V + G +
Sbjct: 111 GSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVA 170
Query: 151 CGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGV 210
G I+L + P ++ P AG + L + L TG+ + G
Sbjct: 171 GGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG--LWAHRLGDQRAKRLLFTGDCITGA 228
Query: 211 EMIACGLA 218
+ GLA
Sbjct: 229 QAAEWGLA 236
>pdb|3T8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8B|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
pdb|3T8B|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
Length = 334
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKG-------AGRAFCSGGD 103
NRP NA V L R+ + +PD+G VL+ G G AFCSGGD
Sbjct: 72 FNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD 126
>pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 63/164 (38%), Gaps = 6/164 (3%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
+++RP NA+ + + + DIG V++ G F +G D+ L L
Sbjct: 38 VVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTL---- 92
Query: 115 KFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
+ + + KP VA + G +G G ++L +RV D F E
Sbjct: 93 NAPEADTAARVRLEAIDAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATE 152
Query: 175 TQMGFHPDAGASFYLSHLPG-YLGEYLALTGEKLNGVEMIACGL 217
G P G L+ + G + L +G + E +A GL
Sbjct: 153 ILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFFDAEEALALGL 196
>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
pdb|2UZF|B Chain B, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
Length = 273
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 15/174 (8%)
Query: 25 RSFSALPDYSSNDYLQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENP 84
R + L +Y Y EG AK +NRP NA V + + ++
Sbjct: 4 RQWETLREYDEIKY----EFYEGIAK---VTINRPEVRNAFTPKTVAEMIDAFSRARDDQ 56
Query: 85 DIGFVLMKGAGR-AFCSGGDVIALYQLLNEGKF--EDFKNFFETLYQFVYLQGTFVKPHV 141
++ +++ G G AFCSGGD + G + ED L L KP +
Sbjct: 57 NVSVIVLTGEGDLAFCSGGD----QKKRGHGGYVGEDQIPRLNVL-DLQRLIRIIPKPVI 111
Query: 142 AILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGY 195
A++ G +G G +++ + D +F ++G S YL+ + G+
Sbjct: 112 AMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGH 165
>pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|B Chain B, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|C Chain C, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 262
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 74/193 (38%), Gaps = 7/193 (3%)
Query: 34 SSNDYLQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKG 93
S ++ +Q V VE ILNRP NA++ L + ++ +P+ ++ G
Sbjct: 4 SMSEEMQPAVRVEKAGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWG 63
Query: 94 AGRAFCSGGDVIALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGA 153
FC+G D+ A + + + L+ KP +A + G + G
Sbjct: 64 DNGTFCAGADLKA----MGTDRGNELHPHGPGPMGPSRLR--LSKPVIAAISGHAVAGGI 117
Query: 154 GISLQGMYRVVTDKTVFSNPETQMGFHPDAGASFYLSHLPGYLGEY-LALTGEKLNGVEM 212
++L RVV + V + G G + L L G+ L LTG ++ E
Sbjct: 118 ELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILTGRPVHANEA 177
Query: 213 IACGLATHYTLNG 225
+ GL G
Sbjct: 178 LDIGLVNRVVARG 190
>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
Length = 263
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 1/141 (0%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRA-FCSGGDVIALYQLLNEG 114
L+ P N L+ + L + I ++++ RA F SG + L ++
Sbjct: 19 LDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQ 78
Query: 115 KFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
+ L V T K VA+++G G G + L R+ + F
Sbjct: 79 SDVRLREVLHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENF 138
Query: 175 TQMGFHPDAGASFYLSHLPGY 195
+MG PD GAS++L + GY
Sbjct: 139 HKMGISPDLGASYFLPRIIGY 159
>pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|C Chain C, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
Length = 279
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDV 104
L RP LNAL L+ L + +++ G GR FCSGGDV
Sbjct: 32 LARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDV 80
>pdb|3SWX|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 6/164 (3%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
LNRP+ NA + +M+ L +E + D+ ++ G G F +G D+ ++ + G
Sbjct: 24 LNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGA 83
Query: 116 FEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPET 175
+ +Q Q KP + + G + G ++L + + F+ E
Sbjct: 84 SLTPEGGINP-WQVDGRQ--LSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEV 140
Query: 176 QMGFHPDAGASFYLSHLPGYLGEYL--ALTGEKLNGVEMIACGL 217
G +P GA+ G+ G + LT + + VE G+
Sbjct: 141 NRGIYPFGGATIRFPRTAGW-GNAMRWMLTADTFDAVEAHRIGI 183
>pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
Length = 725
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 55 ILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEG 114
++N P +N+L+ ++ LK YE D+ +++ GA F SGG I+ + + +G
Sbjct: 23 LINPP--VNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRF-SGGFDISGFGEMQKG 79
Query: 115 KFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
++ K + ++ L KP VA +DG+ +G G +++ R+ PE
Sbjct: 80 NVKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPE 139
Query: 175 TQMGFHPDAGASFYLSHLPG 194
Q+G P G + L L G
Sbjct: 140 LQLGVIPGFGGTQRLPRLVG 159
>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|B Chain B, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|C Chain C, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|D Chain D, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|E Chain E, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|F Chain F, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium
Length = 288
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 10/137 (7%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAG-RAFCSGGD--VIALYQLLN 112
+NRP NA V + + ++G +++ G G +AFC+GGD V Y
Sbjct: 42 INRPQVRNAFRPLTVKEXIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDY---- 97
Query: 113 EGKFEDFKNFFE-TLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFS 171
G ++D + F T KP VA + G ++G G + + + +F
Sbjct: 98 -GGYQDDSGVHHLNVLDFQRQIRTCPKPVVAXVAGYSIGGGHVLHXXCDLTIAAENAIFG 156
Query: 172 NPETQMG-FHPDAGASF 187
++G F GAS+
Sbjct: 157 QTGPKVGSFDGGWGASY 173
>pdb|4HC8|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
pdb|4HC8|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
Length = 255
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 5/131 (3%)
Query: 48 RAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIAL 107
R S A I +NAL + L ++ + + D+G +++ G GR F G D+
Sbjct: 11 RKDSIAVISXDDGKVNALGPAXQQALNAAIDNADRD-DVGALVITGNGRVFSGGFDL--- 66
Query: 108 YQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDK 167
++L G+ + + ++ Y ++ KP V G + GA + G +RV
Sbjct: 67 -KILTSGEVQPAIDXLRGGFELAYRLLSYPKPVVXACTGHAIAXGAFLLSCGDHRVAAHA 125
Query: 168 TVFSNPETQMG 178
E +G
Sbjct: 126 YNIQANEVAIG 136
>pdb|1HZD|A Chain A, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|B Chain B, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|C Chain C, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|D Chain D, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|E Chain E, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|F Chain F, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|2ZQQ|A Chain A, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|B Chain B, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|C Chain C, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|D Chain D, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|E Chain E, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|F Chain F, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQR|A Chain A, Crystal Structure Of Auh Without Rna
pdb|2ZQR|B Chain B, Crystal Structure Of Auh Without Rna
pdb|2ZQR|C Chain C, Crystal Structure Of Auh Without Rna
pdb|2ZQR|D Chain D, Crystal Structure Of Auh Without Rna
pdb|2ZQR|E Chain E, Crystal Structure Of Auh Without Rna
pdb|2ZQR|F Chain F, Crystal Structure Of Auh Without Rna
Length = 272
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 71/168 (42%), Gaps = 6/168 (3%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKG-AGRAFCSGGDVIALYQLLNEG 114
+NR N+L+ +++ L + ++ + + + ++++ FC+G D+ ++ +
Sbjct: 27 INRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSS- 85
Query: 115 KFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPE 174
+ F + + P +A +DG+ +G G ++L RV E
Sbjct: 86 ---EVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVE 142
Query: 175 TQMGFHPDAGASFYLSHLPGY-LGEYLALTGEKLNGVEMIACGLATHY 221
T++ P G + L G L + L + L+G E A GL +H
Sbjct: 143 TKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHV 190
>pdb|3HP0|A Chain A, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|B Chain B, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|C Chain C, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|D Chain D, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|E Chain E, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
pdb|3HP0|F Chain F, Crystal Structure Of A Putative Polyketide Biosynthesis
Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis
Length = 267
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 61/165 (36%), Gaps = 9/165 (5%)
Query: 56 LNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGK 115
+RP N +N +++ ++ E + + V+++G FC G D +YQ G+
Sbjct: 22 FHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEXKRGR 80
Query: 116 FEDFKNFFETLYQ-FVYLQGTFVKPHVAI--LDGITMGCGAGISLQGMYRVVTDKTVFSN 172
+ E LY + LQ P+V I + G G G + FS
Sbjct: 81 KQASSQ--EPLYDLWXKLQ---TGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSL 135
Query: 173 PETQMGFHPDAGASFYLSHLPGYLGEYLALTGEKLNGVEMIACGL 217
E G +P F + + Y L + ++ E GL
Sbjct: 136 SELLFGLYPACVLPFLIRRIGRQKAHYXTLXTKPISVQEASEWGL 180
>pdb|3ISA|A Chain A, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|B Chain B, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|C Chain C, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|D Chain D, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|E Chain E, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|F Chain F, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
Length = 254
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 5/135 (3%)
Query: 45 VEGRAKSRAAILNRPSNLNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDV 104
+E R + L+RP NAL+ +V L ++ + ++ GAGR F +G D
Sbjct: 11 IERRPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHRE-QVPLLVFAGAGRNFSAGFDF 69
Query: 105 IALYQLLNEGKFEDFKNFFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVV 164
Y+ +EG E L Q V + +A+ G G G + +R
Sbjct: 70 TD-YETQSEGDLLLRMVRIEMLLQRVAGSPSLT---LALAHGRNFGAGVDLFAACKWRYC 125
Query: 165 TDKTVFSNPETQMGF 179
T + F P + G
Sbjct: 126 TPEAGFRMPGLKFGL 140
>pdb|4H0X|A Chain A, Crystal Structure Of Nad+-ia(e380a)-actin Complex
Length = 418
Score = 30.8 bits (68), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 181 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGV 226
P YLS +PGY GEY L K+N V+ G T L+
Sbjct: 366 PKDSPGAYLSAIPGYAGEYAVLLNHGSKFKINKVDSYKDGTVTKLILDAT 415
>pdb|1GIQ|A Chain A, Crystal Structure Of The Enzymatic Componet Of Iota-Toxin
From Clostridium Perfringens With Nadh
pdb|1GIQ|B Chain B, Crystal Structure Of The Enzymatic Componet Of Iota-Toxin
From Clostridium Perfringens With Nadh
pdb|1GIR|A Chain A, Crystal Structure Of The Enzymatic Componet Of Iota-Toxin
From Clostridium Perfringens With Nadph
pdb|3BUZ|A Chain A, Crystal Structure Of Ia-Btad-Actin Complex
Length = 413
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 181 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGV 226
P YLS +PGY GEY L K+N V+ G T L+
Sbjct: 361 PKDSPGAYLSAIPGYAGEYEVLLNHGSKFKINKVDSYKDGTVTKLILDAT 410
>pdb|4H0Y|A Chain A, Crystal Structure Of Nad+-ia(e380s)-actin Complex
Length = 418
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 181 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGV 226
P YLS +PGY GEY L K+N V+ G T L+
Sbjct: 366 PKDSPGAYLSAIPGYAGEYSVLLNHGSKFKINKVDSYKDGTVTKLILDAT 415
>pdb|4GY2|A Chain A, Crystal Structure Of Apo-ia-actin Complex
pdb|4H03|A Chain A, Crystal Structure Of Nad+-ia-actin Complex
pdb|4H0T|A Chain A, Crystal Structure Of Ia-adpr-actin Complex
Length = 418
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 181 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGV 226
P YLS +PGY GEY L K+N V+ G T L+
Sbjct: 366 PKDSPGAYLSAIPGYAGEYEVLLNHGSKFKINKVDSYKDGTVTKLILDAT 415
>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 62 LNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKN 121
+NA++ +++ ++ + + + +++ GA FC+G D+ F F
Sbjct: 41 VNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHG---------FSAFTP 91
Query: 122 FFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHP 181
L V + KP +A + G+ +G G ++L YR+ K PE +G P
Sbjct: 92 GL-ALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILP 150
Query: 182 DAGASFYLSHLPGYLGEYLAL----TGEKLNGVEMIACGL 217
A + LP +G +AL +G+ L+ E + G+
Sbjct: 151 GARGT---QLLPRVVGVPVALDLITSGKYLSADEALRLGI 187
>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 62 LNALNTSMVGRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVIALYQLLNEGKFEDFKN 121
+NA++ +++ ++ + + + +++ GA FC+G D+ F F
Sbjct: 26 VNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHG---------FSAFTP 76
Query: 122 FFETLYQFVYLQGTFVKPHVAILDGITMGCGAGISLQGMYRVVTDKTVFSNPETQMGFHP 181
L V + KP +A + G+ +G G ++L YR+ K PE +G P
Sbjct: 77 GL-ALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILP 135
Query: 182 DAGASFYLSHLPGYLGEYLAL----TGEKLNGVEMIACGL 217
A + LP +G +AL +G+ L+ E + G+
Sbjct: 136 GARGT---QLLPRVVGVPVALDLITSGKYLSADEALRLGI 172
>pdb|3MJF|A Chain A, Phosphoribosylamine-Glycine Ligase From Yersinia Pestis
Length = 431
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 71 GRLKRLYESWEENPDIGFVLMKGAGRAFCSGGDVI 105
G+L W+E P +G VL G A GDVI
Sbjct: 320 GKLNEKTSDWDERPSLGVVLAAGGYPADYRQGDVI 354
>pdb|2WN6|A Chain A, Structural Basis For Substrate Recognition In The
Enzymatic Component Of Adp-Ribosyltransferase Toxin Cdta
From Clostridium Difficile
Length = 463
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 181 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGV 226
P YLS +PGY GEY L K+N ++ G T ++
Sbjct: 411 PKGSPGAYLSAIPGYAGEYEVLLNHGSKFKINKIDSYKDGTITKLIVDAT 460
>pdb|2WN4|A Chain A, Structural Basis For Substrate Recognition In The
Enzymatic Component Of Adp-Ribosyltransferase Toxin Cdta
From Clostridium Difficile
pdb|2WN5|A Chain A, Structural Basis For Substrate Recognition In The
Enzymatic Component Of Adp-Ribosyltransferase Toxin Cdta
From Clostridium Difficile
pdb|2WN7|A Chain A, Structural Basis For Substrate Recognition In The
Enzymatic Component Of Adp-Ribosyltransferase Toxin Cdta
From Clostridium Difficile
pdb|2WN8|A Chain A, Structural Basis For Substrate Recognition In The
Enzymatic Component Of Adp-Ribosyltransferase Toxin Cdta
From Clostridium Difficile
Length = 463
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 181 PDAGASFYLSHLPGYLGEYLALTGE----KLNGVEMIACGLATHYTLNGV 226
P YLS +PGY GEY L K+N ++ G T ++
Sbjct: 411 PKGSPGAYLSAIPGYAGEYEVLLNHGSKFKINKIDSYKDGTITKLIVDAT 460
>pdb|2QZA|A Chain A, Crystal Structure Of Salmonella Effector Protein Sopa
pdb|2QZA|B Chain B, Crystal Structure Of Salmonella Effector Protein Sopa
Length = 618
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Query: 14 FKQVAFVSHQQRSFSALPDYSSNDYLQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRL 73
F Q + + QQ SF D L+ +A ILN P N + + S G
Sbjct: 108 FLQYSITTQQQPSFI--------DTTLKNTLIRHKANLSGVILNEPDNSSPPSVSGGGNF 159
Query: 74 KRLYESWEENP 84
RL + W + P
Sbjct: 160 IRLGDIWLQXP 170
>pdb|3SY2|A Chain A, Crystal Structure Of The Salmonella E3 Ubiquitin Ligase
Sopa In Complex With The Human E2 Ubch7
pdb|3SY2|B Chain B, Crystal Structure Of The Salmonella E3 Ubiquitin Ligase
Sopa In Complex With The Human E2 Ubch7
Length = 621
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Query: 14 FKQVAFVSHQQRSFSALPDYSSNDYLQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRL 73
F Q + + QQ SF D L+ +A ILN P N + + S G
Sbjct: 111 FLQYSITTQQQPSFI--------DTTLKNTLIRHKANLSGVILNEPDNSSPPSVSGGGNF 162
Query: 74 KRLYESWEENP 84
RL + W + P
Sbjct: 163 IRLGDIWLQMP 173
>pdb|2QYU|A Chain A, Crystal Structure Of Salmonella Effector Protein Sopa
Length = 627
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Query: 14 FKQVAFVSHQQRSFSALPDYSSNDYLQDQVLVEGRAKSRAAILNRPSNLNALNTSMVGRL 73
F Q + + QQ SF D L+ +A ILN P N + + S G
Sbjct: 117 FLQYSITTQQQPSFI--------DTTLKNTLIRHKANLSGVILNEPDNSSPPSVSGGGNF 168
Query: 74 KRLYESWEENP 84
RL + W + P
Sbjct: 169 IRLGDIWLQMP 179
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,864,311
Number of Sequences: 62578
Number of extensions: 321674
Number of successful extensions: 872
Number of sequences better than 100.0: 99
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 750
Number of HSP's gapped (non-prelim): 103
length of query: 269
length of database: 14,973,337
effective HSP length: 97
effective length of query: 172
effective length of database: 8,903,271
effective search space: 1531362612
effective search space used: 1531362612
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)