Query 024300
Match_columns 269
No_of_seqs 205 out of 2098
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 05:51:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024300.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024300hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zs7_A Pyridoxal kinase; trans 100.0 1E-41 3.5E-46 295.0 27.1 250 13-268 2-262 (300)
2 3pzs_A PM kinase, pyridoxamine 100.0 9.4E-41 3.2E-45 287.9 24.6 246 13-268 3-260 (289)
3 3mbh_A Putative phosphomethylp 100.0 9E-40 3.1E-44 281.9 24.3 242 14-268 7-259 (291)
4 3h74_A Pyridoxal kinase; PSI-I 100.0 3.3E-39 1.1E-43 277.0 21.7 240 13-268 2-249 (282)
5 2ddm_A Pyridoxine kinase; pyri 100.0 7.2E-35 2.5E-39 250.4 27.2 243 14-267 15-266 (283)
6 3rm5_A Hydroxymethylpyrimidine 100.0 2.3E-35 7.7E-40 274.4 24.6 251 2-268 10-276 (550)
7 2yxt_A Pyridoxal kinase; beta 100.0 5.2E-33 1.8E-37 242.0 27.5 253 13-267 3-269 (312)
8 2i5b_A Phosphomethylpyrimidine 100.0 1.1E-31 3.7E-36 229.2 26.1 239 13-268 2-250 (271)
9 1ub0_A THID, phosphomethylpyri 100.0 1.2E-31 4E-36 227.3 23.9 235 14-268 1-244 (258)
10 1jxh_A Phosphomethylpyrimidine 100.0 2.9E-31 9.8E-36 228.6 23.3 241 8-268 19-269 (288)
11 3ry7_A Ribokinase; transferase 99.9 3.4E-25 1.2E-29 191.7 17.5 210 25-267 59-288 (304)
12 3lhx_A Ketodeoxygluconokinase; 99.9 1.1E-25 3.8E-30 196.2 13.7 217 25-267 52-299 (319)
13 2abq_A Fructose 1-phosphate ki 99.9 1.8E-24 6E-29 187.5 20.9 214 25-267 55-282 (306)
14 3umo_A 6-phosphofructokinase i 99.9 2.4E-24 8.3E-29 186.8 21.7 214 25-267 57-289 (309)
15 1rkd_A Ribokinase; carbohydrat 99.9 1.5E-24 5E-29 188.2 20.1 210 25-267 60-288 (309)
16 3ktn_A Carbohydrate kinase, PF 99.9 2E-25 7E-30 196.6 14.9 219 25-267 53-313 (346)
17 4du5_A PFKB; structural genomi 99.9 2.6E-25 8.8E-30 195.3 15.1 215 25-267 77-318 (336)
18 2fv7_A Ribokinase; structural 99.9 1.1E-24 3.7E-29 190.9 17.7 213 25-267 80-313 (331)
19 3iq0_A Putative ribokinase II; 99.9 1.4E-25 4.7E-30 196.6 11.1 215 25-267 56-293 (330)
20 3cqd_A 6-phosphofructokinase i 99.9 8.1E-24 2.8E-28 183.5 21.6 215 25-267 57-289 (309)
21 4e69_A 2-dehydro-3-deoxyglucon 99.9 1E-24 3.4E-29 191.0 15.8 214 25-267 71-312 (328)
22 2jg5_A Fructose 1-phosphate ki 99.9 5.6E-24 1.9E-28 184.2 20.3 214 25-267 55-282 (306)
23 3kzh_A Probable sugar kinase; 99.9 1.7E-24 5.9E-29 189.4 16.9 209 25-267 61-290 (328)
24 2jg1_A Tagatose-6-phosphate ki 99.9 3.3E-24 1.1E-28 187.8 17.7 215 25-267 75-307 (330)
25 3vas_A Putative adenosine kina 99.9 4E-25 1.4E-29 196.6 11.9 219 25-268 103-354 (370)
26 2qcv_A Putative 5-dehydro-2-de 99.9 6.9E-25 2.4E-29 192.1 12.5 219 25-267 63-306 (332)
27 4e84_A D-beta-D-heptose 7-phos 99.9 3.1E-24 1.1E-28 189.6 15.7 135 104-267 203-339 (352)
28 2afb_A 2-keto-3-deoxygluconate 99.9 2.6E-24 9E-29 189.9 15.1 219 25-267 63-325 (351)
29 3otx_A Adenosine kinase, putat 99.9 6.2E-25 2.1E-29 193.6 11.0 218 25-268 88-335 (347)
30 2f02_A Tagatose-6-phosphate ki 99.9 9.6E-24 3.3E-28 184.3 18.0 215 25-267 57-290 (323)
31 3ie7_A LIN2199 protein; phosph 99.9 1E-23 3.4E-28 183.8 17.6 209 25-267 58-286 (320)
32 3ljs_A Fructokinase; fructokia 99.9 1.9E-25 6.5E-30 196.2 6.4 217 25-267 55-309 (338)
33 3pl2_A Sugar kinase, ribokinas 99.9 5.7E-24 1.9E-28 185.3 15.5 214 25-267 60-298 (319)
34 3loo_A Anopheles gambiae adeno 99.9 2E-24 6.8E-29 191.8 12.3 218 24-267 101-350 (365)
35 1bx4_A Protein (adenosine kina 99.9 4.1E-24 1.4E-28 188.2 11.3 216 25-267 86-333 (345)
36 1v1a_A 2-keto-3-deoxygluconate 99.9 1E-23 3.4E-28 183.0 12.3 210 25-267 52-284 (309)
37 4e3a_A Sugar kinase protein; s 99.9 7.3E-24 2.5E-28 187.2 11.4 211 25-267 99-333 (352)
38 3uq6_A Adenosine kinase, putat 99.9 2.5E-23 8.7E-28 185.1 14.3 222 25-268 105-356 (372)
39 2nwh_A AGR_C_3442P, carbohydra 99.9 1.5E-23 5.2E-28 182.5 12.6 210 25-267 58-288 (317)
40 2ajr_A Sugar kinase, PFKB fami 99.9 4.4E-23 1.5E-27 180.7 15.3 214 25-267 70-307 (331)
41 3h49_A Ribokinase; transferase 99.9 3.4E-23 1.2E-27 180.9 14.2 210 25-267 62-295 (325)
42 3hj6_A Fructokinase, FRK; fruc 99.9 1.3E-24 4.5E-29 190.1 5.1 214 25-267 73-308 (327)
43 2qhp_A Fructokinase; NP_810670 99.9 4.9E-23 1.7E-27 177.5 14.6 161 87-267 115-280 (296)
44 2v78_A Fructokinase; transfera 99.9 3E-23 1E-27 180.3 11.0 211 25-267 52-291 (313)
45 2dcn_A Hypothetical fructokina 99.9 4.8E-23 1.7E-27 178.8 10.8 210 25-267 52-289 (311)
46 1vm7_A Ribokinase; TM0960, str 99.9 2.6E-22 8.9E-27 174.3 14.3 132 111-267 159-291 (311)
47 2abs_A Adenosine kinase, AK; r 99.9 8E-23 2.7E-27 182.5 11.1 219 25-267 110-371 (383)
48 2rbc_A Sugar kinase, AGR_C_456 99.9 1.4E-22 4.8E-27 178.4 11.8 203 25-267 85-309 (343)
49 1tyy_A Putative sugar kinase; 99.9 2E-22 7E-27 177.1 9.3 160 87-267 142-310 (339)
50 3kd6_A Carbohydrate kinase, PF 99.9 3E-22 1E-26 174.0 10.3 151 87-267 120-277 (313)
51 4gm6_A PFKB family carbohydrat 99.9 9.5E-23 3.2E-27 179.9 6.9 156 97-267 164-326 (351)
52 3ikh_A Carbohydrate kinase; tr 99.9 2.5E-22 8.7E-27 173.4 9.3 192 25-267 58-269 (299)
53 3ewm_A Uncharacterized sugar k 99.9 1.3E-21 4.4E-26 170.0 12.2 207 25-267 52-282 (313)
54 2c4e_A Sugar kinase MJ0406; tr 99.9 6.6E-22 2.3E-26 171.0 9.3 148 87-267 131-280 (302)
55 2pkf_A Adenosine kinase; trans 99.8 3.2E-21 1.1E-25 169.1 11.8 206 25-267 76-300 (334)
56 2r3b_A YJEF-related protein; p 99.8 1.3E-20 4.4E-25 162.9 15.1 219 2-263 32-263 (310)
57 3bgk_A SMU.573, putative uncha 99.8 1.9E-20 6.5E-25 161.9 16.0 223 2-263 46-280 (311)
58 3go6_A Ribokinase RBSK; phosph 99.8 4E-20 1.4E-24 160.5 11.1 192 25-267 75-285 (310)
59 2hlz_A Ketohexokinase; non-pro 99.8 1.3E-19 4.4E-24 157.4 12.6 204 25-267 73-305 (312)
60 3b1n_A Ribokinase, putative; r 99.8 1.6E-19 5.4E-24 157.8 12.1 149 87-267 136-286 (326)
61 1vk4_A PFKB carbohydrate kinas 99.8 7.4E-19 2.5E-23 151.6 10.9 209 25-267 55-280 (298)
62 1ekq_A Hydroxyethylthiazole ki 99.8 3.6E-18 1.2E-22 145.4 14.3 152 90-263 64-227 (272)
63 3rss_A Putative uncharacterize 99.7 2.7E-17 9.4E-22 150.4 14.7 223 3-260 233-469 (502)
64 3bf5_A Ribokinase related prot 99.7 1.2E-17 4E-22 144.7 7.2 140 86-267 140-279 (306)
65 3rpz_A ADP/ATP-dependent NAD(P 99.7 1.1E-16 3.7E-21 136.1 10.9 221 2-258 18-243 (279)
66 1v8a_A Hydroxyethylthiazole ki 99.7 5.6E-16 1.9E-20 131.2 11.4 155 87-264 57-224 (265)
67 3dzv_A 4-methyl-5-(beta-hydrox 99.6 6.6E-15 2.2E-19 124.5 15.9 156 89-265 63-234 (273)
68 3nl6_A Thiamine biosynthetic b 99.4 1.6E-11 5.4E-16 113.2 17.0 157 89-260 311-495 (540)
69 3hpd_A Hydroxyethylthiazole ki 99.4 6.2E-12 2.1E-16 105.5 12.9 149 90-260 62-220 (265)
70 3k5w_A Carbohydrate kinase; 11 99.3 1.6E-11 5.4E-16 111.5 12.0 209 3-263 224-443 (475)
71 3drw_A ADP-specific phosphofru 96.6 0.038 1.3E-06 49.7 13.4 110 70-191 224-356 (474)
72 1l2l_A ADP-dependent glucokina 76.2 34 0.0012 30.5 11.7 106 70-188 216-341 (457)
73 1ua4_A Glucokinase, ADP-depend 75.7 19 0.00064 32.2 9.9 95 87-190 226-340 (455)
74 1gc5_A ADP-dependent glucokina 68.8 14 0.00047 33.1 7.3 109 70-189 221-349 (467)
75 3nvt_A 3-deoxy-D-arabino-heptu 65.5 65 0.0022 28.0 10.9 108 68-193 154-284 (385)
76 1zco_A 2-dehydro-3-deoxyphosph 58.7 73 0.0025 25.9 11.1 107 69-193 36-165 (262)
77 2i2x_B MTAC, methyltransferase 57.7 67 0.0023 25.9 9.2 118 12-164 121-238 (258)
78 1y80_A Predicted cobalamin bin 57.3 65 0.0022 24.9 8.9 118 12-164 86-205 (210)
79 1vli_A Spore coat polysacchari 56.7 71 0.0024 27.7 9.4 77 103-193 102-192 (385)
80 1qwg_A PSL synthase;, (2R)-pho 56.4 30 0.001 28.2 6.5 130 56-194 12-170 (251)
81 1y7p_A Hypothetical protein AF 56.3 21 0.00071 28.5 5.5 107 15-163 88-200 (223)
82 1vr6_A Phospho-2-dehydro-3-deo 55.4 99 0.0034 26.4 10.5 107 68-192 118-247 (350)
83 3iwp_A Copper homeostasis prot 54.0 71 0.0024 26.5 8.6 57 67-127 105-163 (287)
84 1u83_A Phosphosulfolactate syn 53.8 20 0.0007 29.5 5.2 61 57-124 40-100 (276)
85 3vk5_A MOEO5; TIM barrel, tran 52.6 47 0.0016 27.6 7.2 49 70-124 53-104 (286)
86 3l52_A Orotidine 5'-phosphate 50.2 1.1E+02 0.0037 25.4 9.2 63 87-157 63-134 (284)
87 1ua4_A Glucokinase, ADP-depend 46.9 15 0.00052 32.7 3.7 20 226-245 433-453 (455)
88 1gc5_A ADP-dependent glucokina 46.6 15 0.00051 32.9 3.6 20 226-245 444-464 (467)
89 1vs1_A 3-deoxy-7-phosphoheptul 44.8 1.3E+02 0.0044 24.7 10.4 107 69-193 51-180 (276)
90 1l2l_A ADP-dependent glucokina 44.0 14 0.00049 32.9 3.1 19 226-244 436-455 (457)
91 3l9w_A Glutathione-regulated p 39.4 1.7E+02 0.0058 25.4 9.3 94 14-123 4-101 (413)
92 1to3_A Putative aldolase YIHT; 38.2 1.7E+02 0.0059 24.2 9.5 88 99-194 139-230 (304)
93 3g8r_A Probable spore coat pol 36.5 1.6E+02 0.0055 25.1 8.4 76 102-191 78-167 (350)
94 1ztd_A Hypothetical protein PF 36.5 35 0.0012 23.9 3.4 31 226-257 64-95 (133)
95 2wqp_A Polysialic acid capsule 36.3 2E+02 0.0069 24.5 10.7 76 102-191 91-180 (349)
96 3rht_A (gatase1)-like protein; 36.1 82 0.0028 25.6 6.3 36 13-50 3-38 (259)
97 3eww_A Ompdecase, orotidine-5' 35.8 1.1E+02 0.0039 24.8 7.1 55 68-128 42-97 (260)
98 2fcj_A Small toprim domain pro 35.8 55 0.0019 23.3 4.5 65 102-180 39-103 (119)
99 4ehi_A Bifunctional purine bio 35.0 91 0.0031 28.2 6.7 54 72-125 102-169 (534)
100 4eys_A MCCC family protein; MC 34.3 70 0.0024 27.2 5.8 57 68-126 259-316 (346)
101 3sho_A Transcriptional regulat 33.9 1.4E+02 0.0049 22.0 11.0 101 66-194 23-123 (187)
102 3ezx_A MMCP 1, monomethylamine 33.0 1.4E+02 0.0047 23.3 7.1 118 12-164 90-211 (215)
103 2yxb_A Coenzyme B12-dependent 30.9 1.6E+02 0.0055 21.7 8.9 88 13-123 17-106 (161)
104 2bdq_A Copper homeostasis prot 30.0 68 0.0023 25.6 4.6 53 67-123 70-124 (224)
105 3hv2_A Response regulator/HD d 29.8 1.4E+02 0.0049 20.8 6.6 34 87-123 59-92 (153)
106 3tfx_A Orotidine 5'-phosphate 28.2 1.1E+02 0.0037 24.9 5.7 37 86-127 29-66 (259)
107 4eb5_C NIFU protein (NIFU-1); 27.8 22 0.00076 26.6 1.4 41 228-269 53-96 (153)
108 2fds_A Orotidine-monophosphate 27.5 2.2E+02 0.0075 24.3 7.7 39 87-127 119-161 (352)
109 3tr2_A Orotidine 5'-phosphate 26.7 1E+02 0.0036 24.6 5.4 49 72-126 20-68 (239)
110 1twd_A Copper homeostasis prot 26.7 91 0.0031 25.4 4.9 54 67-124 67-122 (256)
111 3sz8_A 2-dehydro-3-deoxyphosph 26.4 2.7E+02 0.0093 22.9 8.1 71 107-193 83-169 (285)
112 3m47_A Orotidine 5'-phosphate 26.3 1.7E+02 0.0059 23.0 6.6 51 71-127 23-74 (228)
113 3ve9_A Orotidine-5'-phosphate 26.2 93 0.0032 24.5 4.9 70 72-156 13-83 (215)
114 1zla_K Latent nuclear antigen; 25.3 29 0.001 16.8 1.0 20 1-20 1-20 (26)
115 1jeo_A MJ1247, hypothetical pr 25.2 2E+02 0.0069 21.0 7.8 23 172-194 96-118 (180)
116 4gh9_A Polymerase cofactor VP3 25.0 86 0.0029 22.3 3.9 28 228-256 58-85 (146)
117 2guz_B Mitochondrial import in 24.8 93 0.0032 19.4 3.7 29 156-184 2-34 (65)
118 3r89_A Orotidine 5'-phosphate 24.5 1.8E+02 0.0063 24.0 6.5 63 87-157 60-129 (290)
119 2ffc_A Orotidine 5-monophospha 24.1 2.6E+02 0.009 23.8 7.6 39 87-127 129-171 (353)
120 3g3d_A UMP synthase, uridine 5 23.9 1.9E+02 0.0066 24.2 6.6 55 68-128 94-149 (312)
121 3bul_A Methionine synthase; tr 22.7 4.4E+02 0.015 24.1 11.7 123 13-165 97-220 (579)
122 3dhn_A NAD-dependent epimerase 22.3 2.5E+02 0.0087 21.1 7.7 32 14-49 4-35 (227)
123 2fzv_A Putative arsenical resi 22.2 2E+02 0.0068 23.6 6.3 92 10-111 54-149 (279)
124 3zzm_A Bifunctional purine bio 21.8 87 0.003 28.3 4.2 49 77-125 93-155 (523)
125 1j2q_H Proteasome beta subunit 21.5 1.4E+02 0.0047 22.8 5.0 40 228-267 128-167 (202)
126 4gqr_A Pancreatic alpha-amylas 21.4 62 0.0021 28.3 3.3 25 101-127 76-100 (496)
127 3ldv_A Orotidine 5'-phosphate 20.9 1.8E+02 0.0061 23.5 5.7 51 70-126 37-87 (255)
128 1g8m_A Aicar transformylase-IM 20.4 92 0.0031 28.6 4.1 53 73-125 83-150 (593)
129 1ryp_K 20S proteasome; multica 20.4 1.7E+02 0.006 22.0 5.4 40 228-267 132-171 (198)
130 2l82_A Designed protein OR32; 20.2 2E+02 0.0069 20.0 4.9 30 87-121 78-107 (162)
131 1x7f_A Outer surface protein; 20.2 1.2E+02 0.0041 26.3 4.7 40 86-127 54-97 (385)
No 1
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=100.00 E-value=1e-41 Score=294.98 Aligned_cols=250 Identities=38% Similarity=0.686 Sum_probs=208.2
Q ss_pred CCCcEEEEecccccCccccccchHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCC-ccccEEE
Q 024300 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNL-LYYTHLL 91 (269)
Q Consensus 13 ~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~ 91 (269)
+.++||+|+++|++|++|+.+++++|+.+|+++..++|+++++|+||..+.+..++.++++.++++|....+ ..+|+|+
T Consensus 2 ~~~~VLsI~~~~~~G~~G~~aa~~~l~~~G~~v~~~~T~~~Snhtg~~~~~g~~~~~~ql~~~~~~~~~~~~~~~~daV~ 81 (300)
T 3zs7_A 2 SEKTVLSIQSFVTHGYVGNKAATFPLQLHGFDVDGINTVCLSNHSGYPVIRGHRMSLQEYDELMEGVRANNFLSNYRYIL 81 (300)
T ss_dssp CCCEEEEEEEEESSSSCHHHHHHHHHHHTTCEEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCGGGCSEEE
T ss_pred CCCeEEEEeCccCCCcchHHHHHHHHHHcCCeeEEeeeEEecCCCCCCCcCCCcCCHHHHHHHHHHHHhcCCcccCCEEE
Confidence 357999999999999999999999999999999999999999999998888889998999999999987654 2489999
Q ss_pred EcccCChhhHHHHHHHHHHHHhcCCC----ceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCC
Q 024300 92 TGYIGSVSFLNTILQVVEKLRSINPN----LIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR 167 (269)
Q Consensus 92 ~G~l~~~~~~~~i~~~l~~~k~~~~~----~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~ 167 (269)
+|++++.+..+.+.++++.+|+++|+ +++||||+++++|.+|..++..+.+++ +++++|+++||..|++.|+|.+
T Consensus 82 tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~-Ll~~adiitPN~~Ea~~L~g~~ 160 (300)
T 3zs7_A 82 TGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRE-LVPLADIVTPNYFEASLLSGVT 160 (300)
T ss_dssp ECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHH-HGGGCSEECCCHHHHHHHHSSC
T ss_pred ECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHH-HhhhCCEecCCHHHHHHHhCCC
Confidence 99999999999999999999876323 799999999977888888899999998 9999999999999999999998
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEEeeecCC----c--EEEEeeeccCCCCCCceEEEEccccCCCCCCchHHHHHHHHH
Q 024300 168 IGSEADGREACKILHAAGPAKVVITSINIDG----N--LFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLG 241 (269)
Q Consensus 168 ~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~a~~~~ 241 (269)
+.+.++++++++.|+++|++.|+||+|+ .| . +++..... .++ .++.+.++.++++.+++||||+|+|+|++
T Consensus 161 ~~~~~~~~~aa~~L~~~G~~~Vvvt~g~-~g~~~~~~~~l~~~~~~-~~~-~~~~~~~~~~~v~~~~~GtGD~fsaal~a 237 (300)
T 3zs7_A 161 VNDLSSAILAADWFHNCGVAHVIIKSFR-EQENPTHLRFLYSVKEG-SEA-AVRRFSGVVPYHEGRYTGTGDVFAACLLA 237 (300)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEEEEEC----CCSEEEEEEEECCS-TTS-CCEEEEEEEECCSSCBTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEecCc-CCCCCceEEEEEecccc-ccC-CCeEEEEEeccCCCCCcCHHHHHHHHHHH
Confidence 8888999999999999999999999984 44 2 23221000 000 01456777888888999999999999999
Q ss_pred hhccCCCCHHHHHHHHHHHHHHHhhcC
Q 024300 242 WSNKYRDNLDIAAELAVSSLQVLLLLM 268 (269)
Q Consensus 242 ~l~~~g~~~~~a~~~A~~~~~~~l~~~ 268 (269)
+| + |+++++|+++|+++++++|+++
T Consensus 238 ~l-~-g~~~~~Av~~A~~~v~~~i~~t 262 (300)
T 3zs7_A 238 FS-H-SHPMDVAIGKSMAVLQELIIAT 262 (300)
T ss_dssp HH-T-TSCHHHHHHHHHHHHHHHHHHT
T ss_pred HH-c-CCCHHHHHHHHHHHHHHHHHHH
Confidence 99 8 9999999999999999999876
No 2
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=100.00 E-value=9.4e-41 Score=287.94 Aligned_cols=246 Identities=33% Similarity=0.537 Sum_probs=212.7
Q ss_pred CCCcEEEEecccccCccccccchHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCC-ccccEEE
Q 024300 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNL-LYYTHLL 91 (269)
Q Consensus 13 ~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~ 91 (269)
.|++||+|+|++++|++|+.+++++++.+|+.+..++|...+++||+....+..++.++++++++.+.+... ..+|+|+
T Consensus 3 ~m~~vl~I~~~~~~G~~g~~a~~~~l~~~G~~~~~~~T~~~s~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~d~v~ 82 (289)
T 3pzs_A 3 AMKNILSIQSHVVFGHAGNSAAEFPMRRMGVNVWPLNTVQFSNHTQYGHWTGCVMPASHLTDIVQGIADIDRLKDCDAVL 82 (289)
T ss_dssp --CEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCGGGSCCCEEECCHHHHHHHHHHHHHTTCGGGCCEEE
T ss_pred CCCeEEEEecccCCCccchHHHHHHHHHcCCeEEEeeeEEcCCCCCCCCcccccCCHHHHHHHHHHHHhcCCccCCCEEE
Confidence 689999999999999999999999999999999999999888888887777888999999999999876532 2588999
Q ss_pred EcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCC-CccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCCCC
Q 024300 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEG-KLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGS 170 (269)
Q Consensus 92 ~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~-~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~~~ 170 (269)
+|++++.+..+.+.++++.+|++++++++++||++++.+ ..++.++..+.+++.+++++|+++||+.|++.|+|.++.+
T Consensus 83 ~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~~ 162 (289)
T 3pzs_A 83 SGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQLSGERVEN 162 (289)
T ss_dssp ECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHHHHTSCCCS
T ss_pred ECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHHHhCCCCCC
Confidence 999999999999999999999875568999999999654 3456788888888768899999999999999999998888
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEeeecCCc-------EEEEeeeccCCCCCCceEEEEccccC---CCCCCchHHHHHHHH
Q 024300 171 EADGREACKILHAAGPAKVVITSINIDGN-------LFLIGSHQKEKGQSPEQFKIVIPKIP---AYFTGTGDLMTALLL 240 (269)
Q Consensus 171 ~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~dt~GaGDaf~a~~~ 240 (269)
.++..+++++|+++|++.|++|+++.+|+ ++... ++.++++.++++ +|++||||+|+|+|+
T Consensus 163 ~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~---------~~~~~~~~~~~~~~v~dt~GaGD~f~a~~~ 233 (289)
T 3pzs_A 163 VEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTA---------DDAWHICRPLVDFGKRQPVGVGDLTSGLLL 233 (289)
T ss_dssp HHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECS---------SCEEEEEEECCCCTTSCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeC---------CeEEEEEeeeecCCCCCCCcHHHHHHHHHH
Confidence 88999999999999999999998645665 44432 256667666665 479999999999999
Q ss_pred HhhccCCCCHHHHHHHHHHHHHHHhhcC
Q 024300 241 GWSNKYRDNLDIAAELAVSSLQVLLLLM 268 (269)
Q Consensus 241 ~~l~~~g~~~~~a~~~A~~~~~~~l~~~ 268 (269)
+++++ |+++++|+++|+++++.+|+++
T Consensus 234 ~~l~~-g~~~~~A~~~A~~~~~~~i~~t 260 (289)
T 3pzs_A 234 VNLLK-GEPLDKALEHVTAAVYEVMLKT 260 (289)
T ss_dssp HHHHT-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999 9999999999999999999864
No 3
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=100.00 E-value=9e-40 Score=281.85 Aligned_cols=242 Identities=26% Similarity=0.424 Sum_probs=204.1
Q ss_pred CCcEEEEecccccCccccccchHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCCccccEEEEc
Q 024300 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLTG 93 (269)
Q Consensus 14 ~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~G 93 (269)
+++||+|+|+|++|++|+.+++++++.+|+....+.|...+++||+..+.+..++ ++++.+++.|.+.++ .+|+|++|
T Consensus 7 m~~vL~I~g~d~~GgaGi~adl~~~~a~G~~~~~v~Ta~~sq~tg~~~~~~~~~~-~~~~~~~~~~~~~d~-~~~aik~G 84 (291)
T 3mbh_A 7 VKKIAAVHDLSGMGRVSLTVVIPILSSMGFQVCPLPTAVLSNHTQYPGFSFLDLT-DEMPKIIAEWKKLEV-QFDAIYTG 84 (291)
T ss_dssp CCEEEEECCEEEESSCTHHHHHHHHHHTTCEEEECCCEEEEECTTSSCCCEEECT-TTHHHHHHHHHHTTC-CCSEEEEC
T ss_pred cCcEEEEeCCCCCCcHHHHHHHHHHHHcCCeeeEEEEEEeccCCCCCCeeecCcH-HHHHHHHHHHHhcCC-ccCEEEEC
Confidence 6899999999999999999999999999987777776654455588777666665 789999988876554 68999999
Q ss_pred ccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCcc--CChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCCC--
Q 024300 94 YIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLY--VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG-- 169 (269)
Q Consensus 94 ~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~--~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~~-- 169 (269)
++++.+..+.+.++++.+++. ++++||||++++.+++| ..++..+.+++ +++++|+++||..|++.|+|.++.
T Consensus 85 ~l~s~~~i~~v~~~l~~~~~~--~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~-ll~~adiitpN~~Ea~~L~g~~~~~~ 161 (291)
T 3mbh_A 85 YLGSPRQIQIVSDFIKDFRQP--DSLIVADPVLGDNGRLYTNFDMEMVKEMRH-LITKADVITPNLTELFYLLDEPYKAD 161 (291)
T ss_dssp CCSSTTHHHHHHHHHHHHCCT--TCEEEECCCCEETTEECTTCCHHHHHHHHH-HGGGCSEECCBHHHHHHHHTCCCCSC
T ss_pred CCCCHHHHHHHHHHHHHhcCC--CCcEEECceeeeCCCCCCCCCHHHHHHHHH-HhccCCEEeCCHHHHHHHhCCCCCCC
Confidence 999989999999999988654 88999999999765555 36788888886 999999999999999999998764
Q ss_pred -CHHHHHHHHHHHHhcCCCeEEEEeeec------CCcEEEEeeeccCCCCCCceEEEEccccCCCCCCchHHHHHHHHHh
Q 024300 170 -SEADGREACKILHAAGPAKVVITSINI------DGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGW 242 (269)
Q Consensus 170 -~~~~~~~a~~~l~~~g~~~Vvvt~g~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~a~~~~~ 242 (269)
+.++.+++++.|+++|++.|++|+|+. .|++++.+. + ++.+.++.+++++|++||||+|+|+|+++
T Consensus 162 ~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~-----~--~~~~~~~~~~~~~dt~GaGD~f~aai~a~ 234 (291)
T 3mbh_A 162 STDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQ-----G--NRYWKVTCPYLPAHYPGTGDTFTSVITGS 234 (291)
T ss_dssp CCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETT-----T--TEEEEEEESCCGGGSTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCC-----C--CeEEEEEecccCCCCCChHHHHHHHHHHH
Confidence 678899999999999999999998742 244554321 0 13556777776689999999999999999
Q ss_pred hccCCCCHHHHHHHHHHHHHHHhhcC
Q 024300 243 SNKYRDNLDIAAELAVSSLQVLLLLM 268 (269)
Q Consensus 243 l~~~g~~~~~a~~~A~~~~~~~l~~~ 268 (269)
|++ |+++++|+++|+++++.+|+++
T Consensus 235 l~~-g~~l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 235 LMQ-GDSLPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHHHH
Confidence 999 9999999999999999999875
No 4
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=100.00 E-value=3.3e-39 Score=277.01 Aligned_cols=240 Identities=25% Similarity=0.320 Sum_probs=198.4
Q ss_pred CCCcEEEEecccccCccccccchHHHHhcCCceeeeceE-EeecCCCCCCcceeecCHHHHHHHHHHHHhCCCccccEEE
Q 024300 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSV-QFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (269)
Q Consensus 13 ~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 91 (269)
++++||+|+|+|++|++|+.+++++++.+|+....+.|. +.+++.|+..+.+.+++ +.++.+++.+...++ .+|+|+
T Consensus 2 ~~~~vL~I~~~~~~GgaGi~Adl~~~~a~G~~~~~v~Ta~~sq~t~g~~~~~~~~~~-~~~~~~~~~~~~~d~-~~daik 79 (282)
T 3h74_A 2 SLSTMLVAEDLSAVGGISLSSALPVLTAMQYDVAALPTSLLSTHTSGYGTPAVVDLS-TWLPQVFAHWTRAQL-HFDQAL 79 (282)
T ss_dssp CCEEEEEEEEEEEESSCHHHHHHHHHHHTTEEEEEEEEEEEEECSSSSSSCCEECCT-TTHHHHHHHHHHTTC-CCSEEE
T ss_pred CCCeEEEEeCcCCCChHHHHHHHHHHHHcCCeeeeEEEEEeeEcCCCcceeeeecCh-HHHHHHHHHHHHcCC-ccCEEE
Confidence 368999999999999999999999999999766666655 44455588776566665 788888888875453 689999
Q ss_pred EcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCcc--CChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCCC
Q 024300 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLY--VPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG 169 (269)
Q Consensus 92 ~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~--~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~~ 169 (269)
+|++++.+..+.+.++++.+ ++.++|||||+++++.+| ..++..+.+++ +++++|+++||..|++.|+|.++.
T Consensus 80 ~G~l~s~~~i~~v~~~l~~~----~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~-ll~~adiitpN~~Ea~~L~g~~~~ 154 (282)
T 3h74_A 80 IGYVGSVALCQQITTYLEQQ----TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQ-LIQQADVILPNTTEAALLTGAPYQ 154 (282)
T ss_dssp ECCCCSHHHHHHHHHHHHHS----CCSEEEECCCCEETTEECTTCCHHHHHHHHH-HGGGCSEECCCHHHHHHHHTCCCC
T ss_pred ECCCCCHHHHHHHHHHHHHC----CCCcEEEcCeeecCCCCCCCCCHHHHHHHHH-HhccCCEECCCHHHHHHHhCCCCC
Confidence 99999888888888877765 278999999999766555 47888888886 999999999999999999998877
Q ss_pred CHHHHHHHHHHHHh-cCC-CeEEEEeee---cCCcEEEEeeeccCCCCCCceEEEEccccCCCCCCchHHHHHHHHHhhc
Q 024300 170 SEADGREACKILHA-AGP-AKVVITSIN---IDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSN 244 (269)
Q Consensus 170 ~~~~~~~a~~~l~~-~g~-~~Vvvt~g~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~a~~~~~l~ 244 (269)
+.++.+++++.|.+ +|+ +.|++|+|+ ..|.+++... ++.+.++.+++++|++||||+|+|+|+++|+
T Consensus 155 ~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~--------~~~~~~~~~~v~~dt~GaGD~fsaai~a~l~ 226 (282)
T 3h74_A 155 VTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEA--------GHVQYCGARRLPGHYNGTGDTLAAVIAGLLG 226 (282)
T ss_dssp SSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTT--------SCEEEEEEECCSSCCTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCC--------CeEEEEEecCCCCCCcCHHHHHHHHHHHHHH
Confidence 66788999999998 899 999999985 1344444211 2456677777778999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhhcC
Q 024300 245 KYRDNLDIAAELAVSSLQVLLLLM 268 (269)
Q Consensus 245 ~~g~~~~~a~~~A~~~~~~~l~~~ 268 (269)
+ |+++++|+++|++++..+++++
T Consensus 227 ~-g~~l~~A~~~A~~~~~~ai~~~ 249 (282)
T 3h74_A 227 R-GYPLAPTLARANQWLNMAVAET 249 (282)
T ss_dssp T-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999998763
No 5
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=100.00 E-value=7.2e-35 Score=250.41 Aligned_cols=243 Identities=28% Similarity=0.389 Sum_probs=197.1
Q ss_pred CCcEEEEecccccCccccccchHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCC-CccccEEEE
Q 024300 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANN-LLYYTHLLT 92 (269)
Q Consensus 14 ~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~ 92 (269)
+++||.|.|++.+|++|.+++++.|+.+|+++..+++....+++|+..+.+..++.++++.+++.+.+.+ +-.++++++
T Consensus 15 ~~~vL~i~~~~~~g~~G~d~~~~~l~~~Gv~~~~v~t~i~~~~~g~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~v~~ 94 (283)
T 2ddm_A 15 QADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTT 94 (283)
T ss_dssp CCSEEEEEEEESSSSSTHHHHHHHHHHTTCCEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCCTTCCEEEE
T ss_pred cCeEEEEecccCCCcchHHHHHHHHHHcCCeeeEEeEEEeccCCCcCceeeeeCCHHHHHHHHHHHHhcCCcccCCEEEE
Confidence 5899999999999999999999999999999999987654455665545556788888888887776532 113688999
Q ss_pred cccCChhhHHHHHHHHHHHHhcCCCceEEEccccccC-CCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCCCCH
Q 024300 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDE-GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSE 171 (269)
Q Consensus 93 G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~-~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~~~~ 171 (269)
|++++....+.+.++++.+++++++++++|||++++. +..|..++..+.+.+.+++++|+++||+.|++.|+|....+.
T Consensus 95 G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~~ 174 (283)
T 2ddm_A 95 GYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDL 174 (283)
T ss_dssp CCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHHTSCCSSH
T ss_pred CCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHhCCCCCCH
Confidence 9988777778888999999872228999999999853 356666665555654588999999999999999999877777
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeeecC-------CcEEEEeeeccCCCCCCceEEEEccccCCCCCCchHHHHHHHHHhhc
Q 024300 172 ADGREACKILHAAGPAKVVITSINID-------GNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSN 244 (269)
Q Consensus 172 ~~~~~a~~~l~~~g~~~Vvvt~g~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~a~~~~~l~ 244 (269)
++..++++.|.+.|++.|++|+| .. |++++.. ++.++++.+++++||+||||+|+|+|+++|+
T Consensus 175 ~~~~~~a~~l~~~g~~~Vvvt~G-~~~~~~~~~G~~~~~~---------~~~~~~~~~~v~vdt~GAGDaf~a~~~~~l~ 244 (283)
T 2ddm_A 175 DSAIAAAKSLLSDTLKWVVVTSA-SGNEENQEMQVVVVTA---------DSVNVISHSRVKTDLKGTGDLFCAQLISGLL 244 (283)
T ss_dssp HHHHHHHHHHCCSSCCEEEEEC--------CEEEEEEEET---------TEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEccc-cCccCCCceeEEEEeC---------CceEEEeeceeCCCCCChHHHHHHHHHHHHH
Confidence 88889999999899999999998 45 5666543 2456677777778999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhhc
Q 024300 245 KYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 245 ~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+ |+++++|+++|++++..++++
T Consensus 245 ~-g~~~~~A~~~A~a~a~~~v~~ 266 (283)
T 2ddm_A 245 K-GKALTDAVHRAGLRVLEVMRY 266 (283)
T ss_dssp T-TCCHHHHHHHHHHHHHHHHHH
T ss_pred c-CCCHHHHHHHHHHHHHHHHHH
Confidence 9 999999999999999988875
No 6
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-35 Score=274.36 Aligned_cols=251 Identities=18% Similarity=0.190 Sum_probs=201.6
Q ss_pred CCCccccCCCCCCCcEEEEecccccCccccccchHHHHhcCC-ceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHH
Q 024300 2 APPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGY-DVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLE 80 (269)
Q Consensus 2 ~~~~~~~~~~~~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv-~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (269)
.||++.++++.++|+||+|+|+|.+|++|+.+++++|+++|+ .++.++.++++++.|+..+ ..++++.+..+++.+.
T Consensus 10 ~~~~~~~~~~~~~~~vL~IaGsd~~gGAgi~Adlktl~a~g~~~~~~~Tavt~q~~~~v~~~--~~~p~~~v~~ql~~~~ 87 (550)
T 3rm5_A 10 PPPYLTLACNEKLPTVLSIAGTDPSGGAGIEADVKTITAHRCYAMTCITALNAQTPVKVYSI--NNTPKEVVFQTLESNL 87 (550)
T ss_dssp CCTTGGGGTTBCCCEEEEEEEBCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEECSSCEEEE--EECCHHHHHHHHHHHH
T ss_pred CCcccccccCCCCCEEEEEeCcCCCcHHHHHHHHHHHHHcCCeeceeceEEEeecCCCcceE--EECCHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999995 4477776776676665443 4566677777666665
Q ss_pred hCCCccccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEcccccc-CCCccCChhhHHHHHHhccCCCcEEcCCHHH
Q 024300 81 ANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (269)
Q Consensus 81 ~~~~~~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~-~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E 159 (269)
+. +.+|+|++|++ +.+..+.+.++++.+++. +.++|+|||++. ++..++.++..+.+++.+++.+|+|+||..|
T Consensus 88 ~d--~~~daIkiG~l-s~~~i~~v~~~l~~~~~~--~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~E 162 (550)
T 3rm5_A 88 KD--MKCNVIKTGML-TAAAIEVLHEKLLQLGEN--RPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPE 162 (550)
T ss_dssp HH--BCCSEEEECSC-CHHHHHHHHHHHHHHGGG--SCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHH
T ss_pred hC--CCCCEEEECCC-CHHHHHHHHHHHHHhccc--CCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHH
Confidence 32 25899999999 888899999999988766 789999999973 5555667888888885599999999999999
Q ss_pred HHHhhCCC--CCCHHHHHHHHHHHHhcCC-CeEEEEeeecC--C-----c--EEEE-eeeccCCCCCCceEEEEccccC-
Q 024300 160 AEQLTGFR--IGSEADGREACKILHAAGP-AKVVITSINID--G-----N--LFLI-GSHQKEKGQSPEQFKIVIPKIP- 225 (269)
Q Consensus 160 ~~~l~g~~--~~~~~~~~~a~~~l~~~g~-~~Vvvt~g~~~--g-----~--~~~~-~~~~~~~~~~~~~~~~~~~~~~- 225 (269)
++.|+|.. +.+.++..++++.|.++|. +.|+||+|+.. | . +++. .. ++.+.++.++++
T Consensus 163 a~~L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~--------~~~~~~~~~~v~~ 234 (550)
T 3rm5_A 163 CYKLLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAE--------QKFIIFKGNFVNT 234 (550)
T ss_dssp HHHHHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTT--------TEEEEEEEECCCC
T ss_pred HHHHhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCC--------CeEEEEEecCcCC
Confidence 99999974 5667889999999999887 89999998531 1 1 2332 11 256667777777
Q ss_pred CCCCCchHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhcC
Q 024300 226 AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVLLLLM 268 (269)
Q Consensus 226 ~dt~GaGDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~~ 268 (269)
.+++|+||+|+|+|+++|++ |.++++|+++|+.+++.+|+++
T Consensus 235 ~~t~GtGD~fsaaiaa~La~-G~~l~eAv~~A~~~v~~ai~~~ 276 (550)
T 3rm5_A 235 THTHGTGCTLASAIASNLAR-GYSLPQSVYGGIEYVQNAVAIG 276 (550)
T ss_dssp SCCBTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcChhHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH
Confidence 59999999999999999999 9999999999999999999865
No 7
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=100.00 E-value=5.2e-33 Score=242.03 Aligned_cols=253 Identities=50% Similarity=0.881 Sum_probs=196.5
Q ss_pred CCCcEEEEecccccCccccccchHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCCccccEEEE
Q 024300 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT 92 (269)
Q Consensus 13 ~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 92 (269)
..++||+|++++..|++|.+.....|+++||+++++.+..+.+++++....|..++.++++.+++.+....+-.++++++
T Consensus 3 ~~~~vl~i~~~~~~g~vG~D~g~~iL~~~GV~~~~v~~~~~~~~t~~~~~~g~~l~~~~i~~~~~~~~~~~~~~~~~v~~ 82 (312)
T 2yxt_A 3 EECRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDELQELYEGLRLNNMNKYDYVLT 82 (312)
T ss_dssp CCCEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCCCCSEEEE
T ss_pred CCCeEEEEecccCCCccchHhhHHHHHHcCCeEEEEEEEEecCCCCcCCccCccCCHHHHHHHHHHHHhcCCccCCEEEE
Confidence 35799999999999999998844458999999999987644456775544577888899988877776532224678899
Q ss_pred cccCChhhHHHHHHHHHHHHhcCCCceEEEccccccC----CCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCC
Q 024300 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDE----GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI 168 (269)
Q Consensus 93 G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~----~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~ 168 (269)
|++++....+.+.++++.++++.+.+++++||++++. +.+|..++..+.+++.+++++|+++||++|++.|+|.+.
T Consensus 83 G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~~~ 162 (312)
T 2yxt_A 83 GYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQFEAELLSGRKI 162 (312)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHHHHHHHhCCCC
Confidence 9998767788888999999987333569999999854 556666566677764488999999999999999999877
Q ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeeec-----CCcEEEEee----eccCCCC-CCceEEEEccccCCCCCCchHHHHHH
Q 024300 169 GSEADGREACKILHAAGPAKVVITSINI-----DGNLFLIGS----HQKEKGQ-SPEQFKIVIPKIPAYFTGTGDLMTAL 238 (269)
Q Consensus 169 ~~~~~~~~a~~~l~~~g~~~Vvvt~g~~-----~g~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~dt~GaGDaf~a~ 238 (269)
.+.++..++++.|+++|++.|+||+|+. +|++++... .. ++. .++.++++.+++++||+||||+|+|+
T Consensus 163 ~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~vdttGAGDaf~a~ 240 (312)
T 2yxt_A 163 HSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNP--AGSVVMERIRMDIRKVDAVFVGTGDLFAAM 240 (312)
T ss_dssp CSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC------CCCCEEEEEEEEECCSSCCSSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEecccccc--ccccccceEEEeecccCCCCCCchHHHHHH
Confidence 7778899999999999999999999842 246654100 00 000 00355677777767999999999999
Q ss_pred HHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 239 LLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 239 ~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+++|++.|+++++|+++|+++++.++++
T Consensus 241 ~~~~l~~~g~~l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 241 LLAWTHKHPNNLKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 99999942799999999999999988865
No 8
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-31 Score=229.17 Aligned_cols=239 Identities=21% Similarity=0.216 Sum_probs=182.3
Q ss_pred CCCcEEEEecccccCccccccchHHHHhcCCceeeeceEE-eecCCCCCCcceeecCHHHHHHHHHHHHhCCCccccEEE
Q 024300 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQ-FSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (269)
Q Consensus 13 ~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 91 (269)
+|++||+|+|+|.+|++|..++++.++..|+....+.+.. .+++.+........++++.+.+.++.+.+. +.+++++
T Consensus 2 ~~~~vl~i~G~d~~gga~~~a~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~d~v~ 79 (271)
T 2i5b_A 2 SMHKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNSWNHQVFPIDTDTIRAQLATITDG--IGVDAMK 79 (271)
T ss_dssp -CCEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTTTTEEEEEECCHHHHHHHHHHHHHH--SCCSEEE
T ss_pred CCCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeEcCCCCceeEEEeCCHHHHHHHHHHHHhC--CCCCEEE
Confidence 5789999999999999999999999999996444444443 234444111112456667776666655432 1478999
Q ss_pred EcccCChhhHHHHHHHHHHHHhcCCCc-eEEEccccccCC-CccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCC-C
Q 024300 92 TGYIGSVSFLNTILQVVEKLRSINPNL-IYVCDPVMGDEG-KLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR-I 168 (269)
Q Consensus 92 ~G~l~~~~~~~~i~~~l~~~k~~~~~~-~vv~Dp~~~~~~-~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~-~ 168 (269)
+|++++. +.+..+++.++++ +. |++|||++++.. ..+..++..+.+++.+++++|+++||..|++.|+|.. .
T Consensus 80 ~G~l~~~---~~~~~~~~~~~~~--~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g~~~~ 154 (271)
T 2i5b_A 80 TGMLPTV---DIIELAAKTIKEK--QLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSGMDEL 154 (271)
T ss_dssp ECCCCSH---HHHHHHHHHHHHT--TCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHTCCCC
T ss_pred ECCCCCH---HHHHHHHHHHHhC--CCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhCCCCC
Confidence 9998763 4555666777776 67 699999998533 2334555666676348899999999999999999987 7
Q ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeeec-CCc----EEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHh
Q 024300 169 GSEADGREACKILHAAGPAKVVITSINI-DGN----LFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGW 242 (269)
Q Consensus 169 ~~~~~~~~a~~~l~~~g~~~Vvvt~g~~-~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~ 242 (269)
.+.++..++++.|.++|++.|++|+|+. +|+ +++.. ++.++++.++++ +||+||||+|+|+|+++
T Consensus 155 ~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~ 225 (271)
T 2i5b_A 155 KTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDG---------ETAEVLESEMIDTPYTHGAGCTFSAAVTAE 225 (271)
T ss_dssp CSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECS---------SCEEEEEECCCCCSCCBTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeC---------CeEEEEeccccCCCCCCChHHHHHHHHHHH
Confidence 7778888999999999999999999831 674 44422 256677777777 59999999999999999
Q ss_pred hccCCCCHHHHHHHHHHHHHHHhhcC
Q 024300 243 SNKYRDNLDIAAELAVSSLQVLLLLM 268 (269)
Q Consensus 243 l~~~g~~~~~a~~~A~~~~~~~l~~~ 268 (269)
|++ |+++++|+++|++++..++++.
T Consensus 226 l~~-g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 226 LAK-GAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999999998764
No 9
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=100.00 E-value=1.2e-31 Score=227.30 Aligned_cols=235 Identities=24% Similarity=0.315 Sum_probs=173.9
Q ss_pred CCcEEEEecccccCccccccchHHHHhcCC-ceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCCccccEEEE
Q 024300 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGY-DVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT 92 (269)
Q Consensus 14 ~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv-~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 92 (269)
+++||+|.|+|.+|++|..+++..++.+|. .+..++....+++..+..+ ..++++.+.+.++.+.+. +.++++++
T Consensus 1 ~~~vl~i~G~d~~ggag~~a~~~~~~~~~~~g~~~vt~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~v~~ 76 (258)
T 1ub0_A 1 MRVALTIAGSDSGGGAGVQADLKVFFRFGVYGTSALTLVTAQNTLGVQRV--HLLPPEVVYAQIESVAQD--FPLHAAKT 76 (258)
T ss_dssp CCEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEEE--EECCHHHHHHHHHHHHHH--SCCSEEEE
T ss_pred CCEEEEEeccCCCchHHHHHHHHHHHHhCCEEeEeeeEEEeecCCceeEE--EeCCHHHHHHHHHHHHcC--CCCCEEEE
Confidence 578999999999999999999999999886 5555544432333322222 456666665544443321 13578999
Q ss_pred cccCChhhHHHHHHHHHHHHhcCCC-ceEEEcccccc-CCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCCCC
Q 024300 93 GYIGSVSFLNTILQVVEKLRSINPN-LIYVCDPVMGD-EGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGS 170 (269)
Q Consensus 93 G~l~~~~~~~~i~~~l~~~k~~~~~-~~vv~Dp~~~~-~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~~~ 170 (269)
|++++. +.+..+++.++++ + ++++|||+++. .+..++.++..+.+++.+++++|+++||+.|++.|+|....+
T Consensus 77 G~l~~~---~~~~~~~~~~~~~--~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~ 151 (258)
T 1ub0_A 77 GALGDA---AIVEAVAEAVRRF--GVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLGRPIRT 151 (258)
T ss_dssp CCCCSH---HHHHHHHHHHHHT--TCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHCSCCCS
T ss_pred CCcCCH---HHHHHHHHHHHhC--CCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhCCCCCC
Confidence 998754 3455566667766 6 79999999984 333334555555565448899999999999999999988777
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEeeecC-C----cEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhc
Q 024300 171 EADGREACKILHAAGPAKVVITSINID-G----NLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSN 244 (269)
Q Consensus 171 ~~~~~~a~~~l~~~g~~~Vvvt~g~~~-g----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~ 244 (269)
.++..+++++|.++|++.|++|+|+ . | ++++.. ++.++++.++++ +||+||||+|+|+|+++|+
T Consensus 152 ~~~~~~~a~~l~~~g~~~vvvt~g~-~~G~~~~~~~~~~---------~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~ 221 (258)
T 1ub0_A 152 LKEAEEAAKALLALGPKAVLLKGGH-LEGEEAVDLLATR---------GGVLRFSAPRVHTRNTHGTGCTLSAAIAALLA 221 (258)
T ss_dssp HHHHHHHHHHHHTTSCSCEEEEEEE-CC---EEEEEEET---------TEEEEEEECCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCC-CCCCceEEEEEeC---------CeEEEEeccccCCCCCCChHHHHHHHHHHHHH
Confidence 7888899999999999999999984 5 7 555532 255667777777 5999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhhcC
Q 024300 245 KYRDNLDIAAELAVSSLQVLLLLM 268 (269)
Q Consensus 245 ~~g~~~~~a~~~A~~~~~~~l~~~ 268 (269)
+ |+++++|+++|+++++..++++
T Consensus 222 ~-g~~~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 222 K-GRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp T-TCCHHHHHHHHHHHHHHHHHTC
T ss_pred c-CCCHHHHHHHHHHHHHHHHHHh
Confidence 9 9999999999999999988764
No 10
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=100.00 E-value=2.9e-31 Score=228.55 Aligned_cols=241 Identities=17% Similarity=0.196 Sum_probs=174.1
Q ss_pred cCCCCCCCcEEEEecccccCccccccchHHHHhcCCc-eeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCCcc
Q 024300 8 LALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYD-VDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLY 86 (269)
Q Consensus 8 ~~~~~~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~-~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
+..+.++++||+|.|+|.+|++|.++++..++..|.. +..++....+++..+..+ ..++++.+++.++.+.+. + .
T Consensus 19 ~~~~~~~~~vl~i~G~D~~ggagi~a~~~~~~~~g~~g~~~it~~~~~n~~~~~~~--~~~~~~~~~~~~~~l~~~-~-~ 94 (288)
T 1jxh_A 19 QGRHMQRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQSV--YRIEPDFVAAQLDSVFSD-V-R 94 (288)
T ss_dssp ----CCCCEEEEEEECCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEEE--EECCHHHHHHHHHHHHTT-S-C
T ss_pred CCCCCCCCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeecCCCeeee--eeCCHHHHHHHHHHHHhC-C-C
Confidence 3445678999999999999999999988889888753 333333332333322222 356677666655544432 1 3
Q ss_pred ccEEEEcccCChhhHHHHHHHHHHHHhcCCCce-EEEccccc-cCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhh
Q 024300 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLI-YVCDPVMG-DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (269)
Q Consensus 87 ~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~-vv~Dp~~~-~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~ 164 (269)
+++|++|++++ .+.+..+++.++++ +.+ ++|||+++ ..+..++.++..+.+++.+++++|+++||+.|++.|+
T Consensus 95 ~~~v~~G~l~~---~~~~~~~~~~~~~~--~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~ 169 (288)
T 1jxh_A 95 IDTTKIGMLAE---TDIVEAVAERLQRH--HVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALL 169 (288)
T ss_dssp CSEEEECCCCS---HHHHHHHHHHHHHT--TCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHH
T ss_pred CCEEEECCCCC---HHHHHHHHHHHHHC--CCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHc
Confidence 68899999864 35566677778776 775 99999998 3444445555555565447899999999999999999
Q ss_pred CC-CCCCHHHHHHHHHHHHhcCCCeEEEEeeecCC-----cEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHH
Q 024300 165 GF-RIGSEADGREACKILHAAGPAKVVITSINIDG-----NLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTA 237 (269)
Q Consensus 165 g~-~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a 237 (269)
|. ...+.++.++++++|.++|++.|++|+| .+| ++++.. ++.+.++.+.++ +||+||||+|+|
T Consensus 170 g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G-~~G~~~~~~~~~~~---------~~~~~~~~~~~~~vdttGAGD~f~a 239 (288)
T 1jxh_A 170 DAPHARTEQEMLAQGRALLAMGCEAVLMKGG-HLEDAQSPDWLFTR---------EGEQRFSAPRVNTKNTHGTGCTLSA 239 (288)
T ss_dssp TCCCCCSHHHHHHHHHHHHHTTCSEEEEBC----------CEEECS---------SCEEEC---CCCCSCCBTHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCEEEEecc-CCCCCceeEEEEEC---------CeEEEEeccccCCCCCCCchHHHHH
Confidence 98 7777788889999999999999999998 577 666543 245667777777 599999999999
Q ss_pred HHHHhhccCCCCHHHHHHHHHHHHHHHhhcC
Q 024300 238 LLLGWSNKYRDNLDIAAELAVSSLQVLLLLM 268 (269)
Q Consensus 238 ~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~~ 268 (269)
+|+++|++ |+++++|+++|++++..+++++
T Consensus 240 ~~~a~l~~-g~~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 240 ALAALRPR-HRSWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHHHHGGG-SSSHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHHHHc-CCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999 9999999999999999998764
No 11
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.93 E-value=3.4e-25 Score=191.73 Aligned_cols=210 Identities=17% Similarity=0.232 Sum_probs=159.8
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE---------eecCCCCCCc---ce--eecCHHHHHHHHHHHHhCCCcc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ---------FSNHTGYPTF---KG--QVLNGQQLCDLIEGLEANNLLY 86 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~---------~~~~~g~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
..|.+|.|. +++.|+++||+++.+.... ..+..|-..+ .+ ..+++++++...+.+.+
T Consensus 59 ~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~----- 133 (304)
T 3ry7_A 59 FITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIIN----- 133 (304)
T ss_dssp EECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTTHHHHHT-----
T ss_pred EEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHHHHHhcc-----
Confidence 577888765 5667899999988775321 0011121111 11 24667777766666665
Q ss_pred ccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCC
Q 024300 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (269)
Q Consensus 87 ~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~ 166 (269)
++.+.++.. ...+.+.++++.++++ ++++++||++... . +. .+++++|+++||+.|+..|+|.
T Consensus 134 ~~~v~~~~~---~~~~~~~~~~~~a~~~--~~~v~~D~~~~~~----~-------~~-~ll~~~dil~~N~~E~~~l~g~ 196 (304)
T 3ry7_A 134 ADFVVAQLE---VPIPAIISAFEIAKAH--GVTTVLNPAPAKA----L-------PN-ELLSLIDIIVPNETEAELLSGI 196 (304)
T ss_dssp CSEEEEETT---SCHHHHHHHHHHHHHT--TCEEEEECCSCCC----C-------CH-HHHTTCSEECCBHHHHHHHHSC
T ss_pred CCEEEEcCC---CCHHHHHHHHHHHHHc--CCEEEEeCCcccc----c-------cH-HHHHhCCEEecCHHHHHHHhCC
Confidence 444555432 3456778888999988 8999999966421 1 12 2788999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhcc
Q 024300 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNK 245 (269)
Q Consensus 167 ~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~ 245 (269)
...+.++++++++.|.+.|++.|++|.| .+|++++.. ++.++++.++++ +||+||||+|+|+|+++|++
T Consensus 197 ~~~~~~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~ 266 (304)
T 3ry7_A 197 KVTNEQSMKDNANYFLSIGIKTVLITLG-KQGTYFATK---------NQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNK 266 (304)
T ss_dssp CCCSHHHHHHHHHHHHHTTCCEEEEECG-GGCEEEECS---------SCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCT
T ss_pred CCCChhHHHHHHHHHHHcCCCEEEEEeC-CCceEEEEC---------CeeEEecCCCcccCCCCCchHHHHHHHHHHHHc
Confidence 8777788999999999999999999998 689888753 356778877777 69999999999999999998
Q ss_pred CC-CCHHHHHHHHHHHHHHHhhc
Q 024300 246 YR-DNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 246 ~g-~~~~~a~~~A~~~~~~~l~~ 267 (269)
| +++++|+++|+++++..+++
T Consensus 267 -g~~~~~~a~~~A~~~aa~~~~~ 288 (304)
T 3ry7_A 267 -SQDNLADAIDFGNKASSLTVQK 288 (304)
T ss_dssp -TCTTHHHHHHHHHHHHHTTSCC
T ss_pred -CCCCHHHHHHHHHHHHHHHhCC
Confidence 9 99999999999999987765
No 12
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.93 E-value=1.1e-25 Score=196.19 Aligned_cols=217 Identities=18% Similarity=0.131 Sum_probs=156.6
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCC----------CCCCcc---e-----eecCHHHHHHHHHHHHhC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT----------GYPTFK---G-----QVLNGQQLCDLIEGLEAN 82 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~----------g~~~~~---~-----~~~~~~~~~~~~~~~~~~ 82 (269)
..|.+|.|. +++.|+++||+++.+.... ...| |-..+. + ..++.++++...+.+.+.
T Consensus 52 ~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~-~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (319)
T 3lhx_A 52 YVTALGTDSFSQQMLDAWHGENVDTSLTQRME-NRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANF 130 (319)
T ss_dssp EECEECSSHHHHHHHHHHHTTTEECTTCEECT-TCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTC
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcceEEEcC-CCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCC
Confidence 466777664 5677899999988774321 0112 211110 1 124445566666666654
Q ss_pred CCccccEEEE-cccC---ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCCh-hhHHHHHHhccCCCcEEcCCH
Q 024300 83 NLLYYTHLLT-GYIG---SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPS-ELVSVYREKVVPVASMLTPNQ 157 (269)
Q Consensus 83 ~~~~~~~i~~-G~l~---~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~-~~~~~~~~~ll~~~dii~pN~ 157 (269)
+.+.+ |+.+ ++...+.+.++++.++++ ++++++||+++.. +|... +..+.+++ +++++|+++||.
T Consensus 131 -----~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~di~~~n~ 200 (319)
T 3lhx_A 131 -----DYLYLSGISLAILSPTSREKLLSLLRECRAK--GGKVIFDNNYRPR--LWASKEETQQVYQQ-MLECTDIAFLTL 200 (319)
T ss_dssp -----SEEEEEHHHHHTSCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSSCHHHHHHHHHH-HHTTCSEEEEEH
T ss_pred -----CEEEEcCchhhhcCchhHHHHHHHHHHHHhc--CCEEEEeCcCCcc--cccCHHHHHHHHHH-HHhhCCcccCCH
Confidence 44444 4321 345668889999999988 8999999987642 44333 33444555 899999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEcc---ccC-CCCCCchH
Q 024300 158 FEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIP---KIP-AYFTGTGD 233 (269)
Q Consensus 158 ~E~~~l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~dt~GaGD 233 (269)
.|++.|+|. ++.+++++.|.++|++.|++|+| .+|++++... +..+++++. .++ +||+||||
T Consensus 201 ~E~~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~~--------~~~~~~~~~~~~~~~vvdttGAGD 266 (319)
T 3lhx_A 201 DDEDALWGQ-----QPVEDVIARTHNAGVKEVVVKRG-ADSCLVSIAG--------EALVDVPAVKLPKEKVIDTTAAGD 266 (319)
T ss_dssp HHHHHHHCC-----CCHHHHHHHHHHTTCSEEEEEET-TEEEEEEETT--------SCCEEECCCCCCGGGCCCCTTHHH
T ss_pred HHHHHHhCC-----CCHHHHHHHHHhcCCCEEEEEEC-CCCeEEEECC--------cceEEcccccCCCCccCCCCCccH
Confidence 999999996 36677888999999999999998 6898887541 123356653 444 69999999
Q ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 234 LMTALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 234 af~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 267 af~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~~ 299 (319)
T 3lhx_A 267 SFSAGYLAVRLT-GGSAENAAKRGHLTASTVIQY 299 (319)
T ss_dssp HHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHc-CCCHHHHHHHHHHHHHhhhcc
Confidence 999999999998 999999999999999998875
No 13
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.93 E-value=1.8e-24 Score=187.49 Aligned_cols=214 Identities=18% Similarity=0.194 Sum_probs=159.1
Q ss_pred ccCcccccc---chHHHHhcCCceeeeceEE-----eecCCCCCC-c--ceeecCHHHHHHHHHHHHhCCCccccEEE-E
Q 024300 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQ-----FSNHTGYPT-F--KGQVLNGQQLCDLIEGLEANNLLYYTHLL-T 92 (269)
Q Consensus 25 ~~g~~G~~a---~~~~l~~~Gv~~~~i~~~~-----~~~~~g~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~ 92 (269)
..|.+|... +++.|+++||+++++.... +....|-.. + .+..+++++++.+.+.+.+ +-.++++. .
T Consensus 55 ~~~~vG~~~g~~i~~~L~~~gv~~~~v~~~~~t~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~v~~~ 132 (306)
T 2abq_A 55 ALGFLGGFTGAYVRNALEKEEIGLSFIEVEGDTRINVKIKGKQETELNGTAPLIKKEHVQALLEQLTE--LEKGDVLVLA 132 (306)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCEECCEEESSCCEEEEEEESSSCEEEBCCCCCCCHHHHHHHHHHHTT--CCTTCEEEEE
T ss_pred EEEEecchhHHHHHHHHHHcCCceEEEEcCCCCceEEEEeCCceEEEECCCCCCCHHHHHHHHHHHHh--ccCCCEEEEe
Confidence 456666522 5667899999988875311 000122111 1 2335677777776655532 11356544 5
Q ss_pred cccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccC-CCcEEcCCHHHHHHhhCCCCCCH
Q 024300 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-VASMLTPNQFEAEQLTGFRIGSE 171 (269)
Q Consensus 93 G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~-~~dii~pN~~E~~~l~g~~~~~~ 171 (269)
|+++.....+.+.++++.++++ ++++++||+.. .+++ +++ ++|+++||++|+..|+|....+.
T Consensus 133 g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~~~~-~l~~~~dil~~N~~E~~~l~g~~~~~~ 196 (306)
T 2abq_A 133 GSVPQAMPQTIYRSMTQIAKER--GAFVAVDTSGE-------------ALHE-VLAAKPSFIKPNHHELSELVSKPIASI 196 (306)
T ss_dssp SCCCTTSCTTHHHHHHHHHHTT--TCEEEEECCHH-------------HHHH-HGGGCCSEECCBHHHHHHHHTSCCCSH
T ss_pred cCCCCCCCHHHHHHHHHHHHhc--CCEEEEECChH-------------HHHH-HHhcCCcEEecCHHHHHHHhCCCCCCH
Confidence 7776544456778889999987 89999999531 2333 788 99999999999999999876677
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhccCCCCH
Q 024300 172 ADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNKYRDNL 250 (269)
Q Consensus 172 ~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~~g~~~ 250 (269)
++..++++.|.+.|++.|++|.| .+|++++.. ++.++++.++++ +||+||||+|+|+|+++|++ |+++
T Consensus 197 ~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~-g~~~ 265 (306)
T 2abq_A 197 EDAIPHVQRLIGEGIESILVSFA-GDGALFASA---------EGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQE-GKSL 265 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECG-GGCEEEEET---------TEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHT-TCCH
T ss_pred HHHHHHHHHHHHcCCCEEEEecC-CCceEEEeC---------CCEEEEeCCCccccCCccHHHHHHHHHHHHHHc-CCCH
Confidence 88888999999999999999998 689887753 246667777776 69999999999999999998 9999
Q ss_pred HHHHHHHHHHHHHHhhc
Q 024300 251 DIAAELAVSSLQVLLLL 267 (269)
Q Consensus 251 ~~a~~~A~~~~~~~l~~ 267 (269)
++|+++|+++++..+++
T Consensus 266 ~~a~~~A~a~aa~~v~~ 282 (306)
T 2abq_A 266 EDAVPFAVAAGSATAFS 282 (306)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999998875
No 14
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.93 E-value=2.4e-24 Score=186.80 Aligned_cols=214 Identities=17% Similarity=0.169 Sum_probs=161.0
Q ss_pred ccCcccccc---chHHHHhcCCceeeeceEE-------e-ecCCCCCCc---ceeecCHHHHHHHHHHHHhCCCccccE-
Q 024300 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQ-------F-SNHTGYPTF---KGQVLNGQQLCDLIEGLEANNLLYYTH- 89 (269)
Q Consensus 25 ~~g~~G~~a---~~~~l~~~Gv~~~~i~~~~-------~-~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~- 89 (269)
..|.+|.+. +++.|+++||+++++.... + ....|-..+ .+..+++++++.+.+.+.... ..+.
T Consensus 57 ~i~~vG~d~g~~i~~~l~~~gv~~~~v~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~ 134 (309)
T 3umo_A 57 AIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQLEEQVLEIE--SGAIL 134 (309)
T ss_dssp EEEEECHHHHHHHHHHHHHTTCCEEEEECSSCCCCCEEEEETTTCCEEEEECCCCCCCHHHHHHHHHHHTTSC--TTCEE
T ss_pred EEEEecCchHHHHHHHHHHcCCceEEEEecCCCeeEEEEEECCCCcEEEEEcCCCCCCHHHHHHHHHHHHhcC--CCCEE
Confidence 456666543 5667899999999875321 0 001111111 133467778877666654221 2343
Q ss_pred EEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCC--CcEEcCCHHHHHHhhCCC
Q 024300 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPV--ASMLTPNQFEAEQLTGFR 167 (269)
Q Consensus 90 i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~--~dii~pN~~E~~~l~g~~ 167 (269)
+..|+++.....+.+.++++.++++ ++++++||+.. .+.+ ++++ +|+++||+.|++.|+|..
T Consensus 135 ~~~g~~~~~~~~~~~~~~~~~a~~~--~~~v~~D~~~~-------------~l~~-~l~~~~~dil~~N~~E~~~l~g~~ 198 (309)
T 3umo_A 135 VISGSLPPGVKLEKLTQLISAAQKQ--GIRCIVDSSGE-------------ALSA-ALAIGNIELVKPNQKELSALVNRE 198 (309)
T ss_dssp EEESCCCTTCCHHHHHHHHHHHHHT--TCEEEEECCHH-------------HHHH-HTSSCCBSEECCBHHHHHHHHTSC
T ss_pred EEEccCCCCCCHHHHHHHHHHHHhc--CCEEEEECCcH-------------HHHH-HhccCCCeEEEeCHHHHHHHhCCC
Confidence 5677777666678889999999988 89999999432 2333 6666 599999999999999988
Q ss_pred CCCHHHHHHHHHHHHhcCC-CeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhcc
Q 024300 168 IGSEADGREACKILHAAGP-AKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNK 245 (269)
Q Consensus 168 ~~~~~~~~~a~~~l~~~g~-~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~ 245 (269)
..+.++..++++.|.+.|. +.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+++|++
T Consensus 199 ~~~~~~~~~~~~~l~~~g~~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~ 268 (309)
T 3umo_A 199 LTQPDDVRKAAQEIVNSGKAKRVVVSLG-PQGALGVDS---------ENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAE 268 (309)
T ss_dssp CCSTTHHHHHHHHHHHTTSBSCEEEECG-GGCEEEECS---------SCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEEcC-cccEEEEEC---------CcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHc
Confidence 7777789999999999987 89999998 689888753 256677777777 69999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHhhc
Q 024300 246 YRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 246 ~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+++++|+++|+++++..+++
T Consensus 269 -g~~~~~a~~~A~~~aa~~v~~ 289 (309)
T 3umo_A 269 -NASLEEMVRFGVAAGSAATLN 289 (309)
T ss_dssp -TCCHHHHHHHHHHHHHHHTTS
T ss_pred -CCCHHHHHHHHHHHHHHHhcC
Confidence 999999999999999998875
No 15
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.93 E-value=1.5e-24 Score=188.22 Aligned_cols=210 Identities=21% Similarity=0.284 Sum_probs=156.7
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE---------eecCCCCCCc---ce--eecCHHHHHHHHHHHHhCCCcc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ---------FSNHTGYPTF---KG--QVLNGQQLCDLIEGLEANNLLY 86 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~---------~~~~~g~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
..|.+|.|. +++.|+++||+++++.... ..+..|-..+ .+ ..+++++++.+.+.+..
T Consensus 60 ~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~----- 134 (309)
T 1rkd_A 60 FIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIAN----- 134 (309)
T ss_dssp EEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHHH-----
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHHHHHhccc-----
Confidence 577788774 5667899999988765321 0011121111 11 24666777655555665
Q ss_pred ccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCC
Q 024300 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (269)
Q Consensus 87 ~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~ 166 (269)
++++.++... ..+.+.++++.++++ ++++++||+++.. +. . .+++++|+++||+.|++.|+|.
T Consensus 135 ~~~v~~~~~~---~~~~~~~~~~~a~~~--g~~v~~D~~~~~~----~~-------~-~ll~~~dil~~N~~E~~~l~g~ 197 (309)
T 1rkd_A 135 ASALLMQLES---PLESVMAAAKIAHQN--KTIVALNPAPARE----LP-------D-ELLALVDIITPNETEAEKLTGI 197 (309)
T ss_dssp CSEEEECSSS---CHHHHHHHHHHHHHT--TCEEEECCCSCCC----CC-------H-HHHTTCSEECCCHHHHHHHHSC
T ss_pred CCEEEEeCCC---CHHHHHHHHHHHHHc--CCEEEEECCcccc----ch-------H-HHHhhCCEEEcCHHHHHHHhCC
Confidence 3445554322 236677788888887 8999999987631 11 1 2788999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhcc
Q 024300 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNK 245 (269)
Q Consensus 167 ~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~ 245 (269)
...+.++.+++++.|.+.|++.|++|.| .+|++++.. ++.++++.++++ +||+||||+|+|+|+++|++
T Consensus 198 ~~~~~~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~ 267 (309)
T 1rkd_A 198 RVENDEDAAKAAQVLHEKGIRTVLITLG-SRGVWASVN---------GEGQRVPGFRVQAVDTIAAGDTFNGALITALLE 267 (309)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEEECG-GGCEEEEET---------TEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEEEC-CCcEEEEeC---------CceEEcCCCCCCcCCCCChHHHHHHHHHHHHHc
Confidence 7666778888999999999999999998 689887653 256677777776 69999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHhhc
Q 024300 246 YRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 246 ~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+++++|+++|++++...+++
T Consensus 268 -g~~~~~a~~~a~~~aa~~~~~ 288 (309)
T 1rkd_A 268 -EKPLPEAIRFAHAAAAIAVTR 288 (309)
T ss_dssp -TCCHHHHHHHHHHHHHHHHTS
T ss_pred -CCCHHHHHHHHHHHHHHHcCC
Confidence 999999999999999998875
No 16
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.93 E-value=2e-25 Score=196.60 Aligned_cols=219 Identities=14% Similarity=0.059 Sum_probs=158.3
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCCC----------CCC-c-c-------eeecCHHHHHHHHHHHHh
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG----------YPT-F-K-------GQVLNGQQLCDLIEGLEA 81 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~g----------~~~-~-~-------~~~~~~~~~~~~~~~~~~ 81 (269)
..|.+|.|. +++.|++.||+++.+.... ..|+ -.. + + ...+++++++ ..+.+.+
T Consensus 53 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~--~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~-~~~~~~~ 129 (346)
T 3ktn_A 53 LITKLPANRLGEAGKAALRKLGISDQWVGEKG--DHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD-FEAFLAE 129 (346)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECC--SCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSC-HHHHHTT
T ss_pred EEEecCCCHHHHHHHHHHHHcCCcceEEEeCC--CceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcC-hHHHhCC
Confidence 567777764 5677899999988775321 1111 101 1 1 0123444443 2233444
Q ss_pred CCCccccEEEE-cccC--ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCC---hhhHHHHHHhccCCCcEEcC
Q 024300 82 NNLLYYTHLLT-GYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP---SELVSVYREKVVPVASMLTP 155 (269)
Q Consensus 82 ~~~~~~~~i~~-G~l~--~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~---~~~~~~~~~~ll~~~dii~p 155 (269)
++++.+ |+.+ ++...+.+.++++.++++ +++++|||+++.. +|.. ++..+.+++ +++++|+++|
T Consensus 130 -----~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~r~~--~~~~~~~~~~~~~~~~-ll~~~dil~~ 199 (346)
T 3ktn_A 130 -----VDMVHICGISLSLTEKTRDAALILAQKAHAY--QKKVCFDFNYRPS--LNTANSALFMRQQYER-ILPYCDIVFG 199 (346)
T ss_dssp -----CSEEEECTHHHHHCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GCCHHHHHHHHHHHHH-HGGGCSEEEC
T ss_pred -----CCEEEEeCccccCCHHHHHHHHHHHHHHHHc--CCEEEEeCCCChH--HcCCccHHHHHHHHHH-HHHhCCEEEc
Confidence 454544 4432 445568889999999988 8999999987743 3333 445566666 8899999999
Q ss_pred CHHHHHHhhCCC-CC---CHHHHHHHHHHHHh-cCCCeEEEEeeecCC-------cEEEEeeeccCCCCCCceEEEEccc
Q 024300 156 NQFEAEQLTGFR-IG---SEADGREACKILHA-AGPAKVVITSINIDG-------NLFLIGSHQKEKGQSPEQFKIVIPK 223 (269)
Q Consensus 156 N~~E~~~l~g~~-~~---~~~~~~~a~~~l~~-~g~~~Vvvt~g~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (269)
|+.|++.|+|.. .. +.++++++++.|.+ .|++.|++|.| .+| ++++.. ++.+++++++
T Consensus 200 N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G-~~G~~~~~~g~~~~~~---------~~~~~~~~~~ 269 (346)
T 3ktn_A 200 SRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTR-SHSQNQNYLSGYLYTQ---------NEYQQSEKRP 269 (346)
T ss_dssp CHHHHHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEEEEE-EECSSCEEEEEEEECS---------SCEEECCCEE
T ss_pred cHHHHHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEEEEecC-ccccccCcceEEEEEC---------CceEEeCCCc
Confidence 999999999976 32 45678888999987 49999999998 467 666532 2566677777
Q ss_pred cC-CCCCCchHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 224 IP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 224 ~~-~dt~GaGDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
++ +||+||||+|+|+|+++|++ |+++++|+++|+++++..+++
T Consensus 270 v~vvdttGAGDaF~ag~~~~l~~-g~~l~~a~~~A~a~aa~~v~~ 313 (346)
T 3ktn_A 270 LLNLDRIGAGDAYAAGILYGYSQ-NWSLEKAVTFATVNGVLAHTI 313 (346)
T ss_dssp CCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHTTS
T ss_pred cccCCCCchhHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcc
Confidence 77 69999999999999999998 999999999999999998875
No 17
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.93 E-value=2.6e-25 Score=195.35 Aligned_cols=215 Identities=16% Similarity=0.147 Sum_probs=151.6
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE-------e--ecCCC-CCCcc-------eeecCHHHHHHHHHHHHhCC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-------F--SNHTG-YPTFK-------GQVLNGQQLCDLIEGLEANN 83 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~-------~--~~~~g-~~~~~-------~~~~~~~~~~~~~~~~~~~~ 83 (269)
..|.+|.|. +++.|++.||+++.+.... . .+..| -..+. ...++.++++. +.+.+
T Consensus 77 ~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~--~~l~~-- 152 (336)
T 4du5_A 77 WASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE--AWLLS-- 152 (336)
T ss_dssp EEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH--HHHTT--
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH--hHhcc--
Confidence 466677664 5667899999998775321 0 01112 11110 11344444433 23443
Q ss_pred CccccEEE-EcccC--ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChh-hHHHHHHhccCCCcEEcCCHHH
Q 024300 84 LLYYTHLL-TGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSE-LVSVYREKVVPVASMLTPNQFE 159 (269)
Q Consensus 84 ~~~~~~i~-~G~l~--~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~-~~~~~~~~ll~~~dii~pN~~E 159 (269)
++.+. .|+.+ ++...+.+.++++.++++ ++++++||+++.. .|...+ ..+.+++ +++++|+++||+.|
T Consensus 153 ---~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~dil~pN~~E 224 (336)
T 4du5_A 153 ---ARHLHATGVFPAISATTLPAARKTMDLMRAA--GRSVSFDPNLRPT--LWATPELMRDAIND-LATRADWVLPGMEE 224 (336)
T ss_dssp ---EEEEEEESSGGGSCTTHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSSSHHHHHHHHHH-HHTTCSEECCBHHH
T ss_pred ---CCEEEEcCchhhCChHHHHHHHHHHHHHHHC--CCEEEEeCcCCch--hcCChHHHHHHHHH-HHHhCCEEECCHHH
Confidence 44444 56543 555678888999999988 8999999987642 343333 3445555 88999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC--CCCCCchHHHHH
Q 024300 160 AEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP--AYFTGTGDLMTA 237 (269)
Q Consensus 160 ~~~l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dt~GaGDaf~a 237 (269)
++.|+|. ++.+++++.|.++|++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|
T Consensus 225 a~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~~vvdttGAGDaf~a 289 (336)
T 4du5_A 225 GRFLTGE-----TTPEGVARFYRQLGAKLVVVKLG-AEGAYFDGE---------AGSGRVAGFPVAEVVDTVGAGDGFAV 289 (336)
T ss_dssp HHHHHCC-----CSHHHHHHHHHHTTCSEEEEECG-GGCEEEEET---------TEEEEECCCCC-------CHHHHHHH
T ss_pred HHHHhCC-----CCHHHHHHHHHhcCCCEEEEEec-CCceEEEEC---------CeEEEeCCccCCCCCCCccchHHHHH
Confidence 9999996 35677888899999999999998 689888753 356678877776 599999999999
Q ss_pred HHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 238 LLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 238 ~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+|+++|++ |+++++|+++|+++++..+++
T Consensus 290 ~~~~~l~~-g~~l~~a~~~A~~~aa~~v~~ 318 (336)
T 4du5_A 290 GVISALLD-GLGVPEAVKRGAWIGARAVQV 318 (336)
T ss_dssp HHHHHHHT-TCCHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHc-CCCHHHHHHHHHHHHHHHhcc
Confidence 99999998 999999999999999998875
No 18
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.93 E-value=1.1e-24 Score=190.95 Aligned_cols=213 Identities=21% Similarity=0.187 Sum_probs=157.1
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE---------eecCCCCCCc---ce--eecCHHHHHHHHHHHHhCCCcc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ---------FSNHTGYPTF---KG--QVLNGQQLCDLIEGLEANNLLY 86 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~---------~~~~~g~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
..|.+|.|. +++.|+++||+++++.... ..+..|-..+ .+ ..+++++++...+.+.+
T Consensus 80 ~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~l~~----- 154 (331)
T 2fv7_A 80 MVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISR----- 154 (331)
T ss_dssp EEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHHTHHHHHH-----
T ss_pred EEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHHHHHhhcc-----
Confidence 467777764 5667899999888765321 0011121111 11 14666777665555654
Q ss_pred ccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCC
Q 024300 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (269)
Q Consensus 87 ~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~ 166 (269)
++++.++...+ .+.+..+++.++++ +++++|||+++.. .+ .+ .+++++|+++||+.|++.|+|.
T Consensus 155 ~~~v~~~~~~~---~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~-~~--------~ll~~~dil~~N~~Ea~~l~g~ 218 (331)
T 2fv7_A 155 AKVMVCQLEIT---PATSLEALTMARRS--GVKTLFNPAPAIA--DL-DP--------QFYTLSDVFCCNESEAEILTGL 218 (331)
T ss_dssp CSEEEECSSSC---HHHHHHHHHHHHHT--TCEEEECCCSCCT--TC-CT--------HHHHTCSEEEEEHHHHHHHHSS
T ss_pred CCEEEEecCCC---HHHHHHHHHHHHHc--CCEEEEeCCcccc--cc-hH--------HHHhcCCEEEeCHHHHHHHhCC
Confidence 45566665333 36677888889887 8999999987632 11 11 2678999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhcc
Q 024300 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNK 245 (269)
Q Consensus 167 ~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~ 245 (269)
...+.++.+++++.|.+.|++.|++|+| .+|++++.... .+.++++.++++ +||+||||+|+|+|+++|++
T Consensus 219 ~~~~~~~~~~~~~~l~~~g~~~VvvT~G-~~G~~~~~~~~-------~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~ 290 (331)
T 2fv7_A 219 TVGSAADAGEAALVLLKRGCQVVIITLG-AEGCVVLSQTE-------PEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAY 290 (331)
T ss_dssp CCCSHHHHHHHHHHHHTTTCSEEEEECG-GGCEEEEESSC-------CSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHHHHcCCCEEEEEEC-CCceEEEECCC-------CceeEecCCCCccCCCCCchHHHHHHHHHHHHh
Confidence 7667788889999999999999999998 68988765310 045667777776 69999999999999999999
Q ss_pred CC--CCHHHHHHHHHHHHHHHhhc
Q 024300 246 YR--DNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 246 ~g--~~~~~a~~~A~~~~~~~l~~ 267 (269)
| +++++|+++|++++..++++
T Consensus 291 -g~~~~~~~a~~~A~~~aa~~v~~ 313 (331)
T 2fv7_A 291 -YPNLSLEDMLNRSNFIAAVSVQA 313 (331)
T ss_dssp -CTTSCHHHHHHHHHHHHHHHHTS
T ss_pred -CCCCCHHHHHHHHHHHHHHHhCC
Confidence 9 99999999999999998875
No 19
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.92 E-value=1.4e-25 Score=196.56 Aligned_cols=215 Identities=18% Similarity=0.224 Sum_probs=155.8
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE-------e--ecCCCCCCc--c--e---eecCHHHHHHHHHHHHhCCC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-------F--SNHTGYPTF--K--G---QVLNGQQLCDLIEGLEANNL 84 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~-------~--~~~~g~~~~--~--~---~~~~~~~~~~~~~~~~~~~~ 84 (269)
..|.+|.|. +++.|++.||+++.+.... + .+..|-..+ . + ..++.+++.. +.+.
T Consensus 56 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~--~~~~---- 129 (330)
T 3iq0_A 56 IISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE--NILK---- 129 (330)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCG--GGGT----
T ss_pred EEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCH--hHhc----
Confidence 466777764 5667899999988775321 0 011222201 0 0 1122232221 1222
Q ss_pred ccccEE-EEcccC-ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHH
Q 024300 85 LYYTHL-LTGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (269)
Q Consensus 85 ~~~~~i-~~G~l~-~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~ 162 (269)
.++.+ ..|+.+ ++...+.+.++++.++++ ++++++||+++.. +|..++..+.+++ +++++|+++||+.|++.
T Consensus 130 -~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~ 203 (330)
T 3iq0_A 130 -DCTHFHIMGSSLFSFHMVDAVKKAVTIVKAN--GGVISFDPNIRKE--MLDIPEMRDALHF-VLELTDIYMPSEGEVLL 203 (330)
T ss_dssp -TEEEEEEEGGGCSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GGGSHHHHHHHHH-HHHTCSEECCBGGGTTT
T ss_pred -cCCEEEEechhhcCcchHHHHHHHHHHHHHc--CCEEEEcCCCCcc--ccCcHHHHHHHHH-HHhhCCEEecCHHHHHH
Confidence 24544 456654 455677888999999988 8999999987643 4444455666665 88999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHH
Q 024300 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLG 241 (269)
Q Consensus 163 l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~ 241 (269)
|+|. ++.+++++.|.+.|++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|++
T Consensus 204 l~g~-----~~~~~~~~~l~~~g~~~vvvT~G-~~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaf~a~~~~ 268 (330)
T 3iq0_A 204 LSPH-----STPERAIAGFLEEGVKEVIVKRG-NQGASYYSA---------NEQFHVESYPVEEVDPTGAGDCFGGAWIA 268 (330)
T ss_dssp TCSC-----SSHHHHHHHHHHHTCSEEEEECG-GGCEEEECS---------SCEEEECCCCCCCSCCTTHHHHHHHHHHH
T ss_pred HhCC-----CCHHHHHHHHHHcCCCEEEEEeC-CCceEEEEC---------CceEEecCCCCccCCCCChHHHHHHHHHH
Confidence 9986 35677888898899999999998 789988753 256778877777 6999999999999999
Q ss_pred hhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 242 WSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 242 ~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+|++ |+++++|+++|+++++..+++
T Consensus 269 ~l~~-g~~~~~a~~~A~~~aa~~v~~ 293 (330)
T 3iq0_A 269 CRQL-GFDAHRALQYANACGALAVTR 293 (330)
T ss_dssp HHHT-TCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 9998 999999999999999998875
No 20
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.92 E-value=8.1e-24 Score=183.51 Aligned_cols=215 Identities=17% Similarity=0.152 Sum_probs=157.0
Q ss_pred ccCcccccc---chHHHHhcCCceeeeceEE-------e-ecCCCCCCc---ceeecCHHHHHHHHHHHHhCCCccccEE
Q 024300 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQ-------F-SNHTGYPTF---KGQVLNGQQLCDLIEGLEANNLLYYTHL 90 (269)
Q Consensus 25 ~~g~~G~~a---~~~~l~~~Gv~~~~i~~~~-------~-~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i 90 (269)
..|.+|.+. +++.|+++||+++++.... + .+..|-..+ .+..+++++++.+.+.+.+. +-. +++
T Consensus 57 ~i~~vG~d~g~~i~~~l~~~gv~~~~v~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~-~~v 134 (309)
T 3cqd_A 57 AIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQLEEQVLEI-ESG-AIL 134 (309)
T ss_dssp EEEEECHHHHHHHHHHHHHTTCCEEEEECSSCCCCCEEEEETTTCCEEEEECCCCCCCHHHHHHHHHHHHTS-CTT-CEE
T ss_pred EEEEecCchHHHHHHHHHHcCCCceeEEcCCCCeeEEEEEEcCCCCEEEEEcCCCCCCHHHHHHHHHHHHHh-hcC-CEE
Confidence 456666543 5667899999998874321 1 111121101 12346667777665544321 113 543
Q ss_pred -EEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCC-cEEcCCHHHHHHhhCCCC
Q 024300 91 -LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVA-SMLTPNQFEAEQLTGFRI 168 (269)
Q Consensus 91 -~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~-dii~pN~~E~~~l~g~~~ 168 (269)
..|+++.....+.+.++++.++++ ++++++||+.. . +++.+.+++ |+++||++|++.|+|...
T Consensus 135 ~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~---------~----~~~~l~~~~~dil~~N~~E~~~l~g~~~ 199 (309)
T 3cqd_A 135 VISGSLPPGVKLEKLTQLISAAQKQ--GIRCIVDSSGE---------A----LSAALAIGNIELVKPNQKELSALVNREL 199 (309)
T ss_dssp EEESCCCTTCCHHHHHHHHHHHHTT--TCEEEEECCHH---------H----HHHHTTTCCBSEECCBHHHHHHHHTSCC
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHc--CCeEEEECChH---------H----HHHHHHhCCCEEEeeCHHHHHHHhCCCC
Confidence 557776555567888899999987 89999999542 1 223244788 999999999999999876
Q ss_pred CCHHHHHHHHHHHHhcC-CCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhccC
Q 024300 169 GSEADGREACKILHAAG-PAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNKY 246 (269)
Q Consensus 169 ~~~~~~~~a~~~l~~~g-~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~~ 246 (269)
.+.++..++++.|.+.| ++.|++|.| .+|++++.. ++.++++.++++ +||+||||+|+|+|+++|++
T Consensus 200 ~~~~~~~~~~~~l~~~g~~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~- 268 (309)
T 3cqd_A 200 TQPDDVRKAAQEIVNSGKAKRVVVSLG-PQGALGVDS---------ENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAE- 268 (309)
T ss_dssp CSTTHHHHHHHHHHHTTSBSCEEEECG-GGCEEEECS---------SCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHT-
T ss_pred CCHHHHHHHHHHHHHcCCCCEEEEEec-CCceEEEEC---------CceEEEeCCccccCCCcCcHHHHHHHHHHHHHc-
Confidence 66678888999999999 999999998 689887643 246677777776 69999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHhhc
Q 024300 247 RDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 247 g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+++++|+++|+++++..+++
T Consensus 269 g~~~~~a~~~A~~~aa~~~~~ 289 (309)
T 3cqd_A 269 NASLEEMVRFGVAAGSAATLN 289 (309)
T ss_dssp TCCHHHHHHHHHHHHHHHTC-
T ss_pred CCCHHHHHHHHHHHHHHHHcC
Confidence 999999999999999998875
No 21
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.92 E-value=1e-24 Score=190.99 Aligned_cols=214 Identities=16% Similarity=0.156 Sum_probs=153.1
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCC---------CCCCcc---ee-----ecCHHHHHHHHHHHHhCC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT---------GYPTFK---GQ-----VLNGQQLCDLIEGLEANN 83 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~---------g~~~~~---~~-----~~~~~~~~~~~~~~~~~~ 83 (269)
..|.+|.|. +++.|++.||+++.+.... ..+| |-..+. +. .++..++. .+.+.+
T Consensus 71 ~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~-~~~T~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~-- 145 (328)
T 4e69_A 71 YFSAIGDDALSQQMRAAMSAAGIDGGGLRVIP-GRTVGLYLITLEQGERSFAYWRGQSAARELAGDADAL--AAAMAR-- 145 (328)
T ss_dssp EECEECSSHHHHHHHHHHHHTTEECTTCEECT-TCCCEEEEEEEETTEEEEEEECTTCGGGGTTSCHHHH--HHHHTT--
T ss_pred EEEeeCCCHHHHHHHHHHHHcCCccceEEEcC-CCCCeEEEEEecCCceEEEEeCCCCHHHhhcCccccc--hHHhcC--
Confidence 456677664 5667899999887764321 0112 211110 10 11222222 134554
Q ss_pred CccccEEEE-ccc---CChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCC-hhhHHHHHHhccCCCcEEcCCHH
Q 024300 84 LLYYTHLLT-GYI---GSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVASMLTPNQF 158 (269)
Q Consensus 84 ~~~~~~i~~-G~l---~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~-~~~~~~~~~~ll~~~dii~pN~~ 158 (269)
++.+.+ |+. .++...+.+.++++.++++ ++++++||+++.. +|.. ++..+.+++ +++++|+++||+.
T Consensus 146 ---~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~ 217 (328)
T 4e69_A 146 ---ADVVYFSGITLAILDQCGRATLLRALAQARAT--GRTIAFDPNLRPR--LWAGTGEMTETIMQ-GAAVSDIALPSFE 217 (328)
T ss_dssp ---CSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GCSCHHHHHHHHHH-HHTTCSEECCBHH
T ss_pred ---CCEEEECCchhhccCchHHHHHHHHHHHHHhC--CCEEEEeCCCChh--hcCCHHHHHHHHHH-HHHhCCEEeCCHH
Confidence 444443 432 2456678888999999988 8999999987643 4433 334455555 8999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccc-cC-CCCCCchHHHH
Q 024300 159 EAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPK-IP-AYFTGTGDLMT 236 (269)
Q Consensus 159 E~~~l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~dt~GaGDaf~ 236 (269)
|++.|+|.+ +.+++++.|.++|++.|++|.| .+|++++.. ++.++++.++ ++ +||+||||+|+
T Consensus 218 E~~~l~g~~-----~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~~~~vvdttGAGDaf~ 282 (328)
T 4e69_A 218 DEAAWFGDA-----GPDATADRYARAGVRSVVVKNG-PHAVHFLQD---------GRRGRVPVPPVAQVVDTTAAGDSFN 282 (328)
T ss_dssp HHHHHHTCS-----SHHHHHHHHHTTTCSEEEEBCT-TSCEEEEET---------TEEEEECCCCCCSCCCCTTHHHHHH
T ss_pred HHHHHcCCC-----CHHHHHHHHHhcCCCEEEEEeC-CCCeEEEeC---------CceEEecCCCCCCccCCCChhHHHH
Confidence 999999973 6778888999999999999998 689888753 2566677654 55 69999999999
Q ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 237 ALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 237 a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+|+++|++ |+++++|+++|+++++.++++
T Consensus 283 a~~~~~l~~-g~~l~~a~~~A~~~aa~~v~~ 312 (328)
T 4e69_A 283 AGLLDSVLA-GQPLETAIAAAAALAGQVVQG 312 (328)
T ss_dssp HHHHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHC-CCCHHHHHHHHHHHHHHHHcc
Confidence 999999998 999999999999999998875
No 22
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.92 E-value=5.6e-24 Score=184.21 Aligned_cols=214 Identities=18% Similarity=0.186 Sum_probs=157.4
Q ss_pred ccCcccccc---chHHHHhcCCceeeeceEE-----eecCCCCCC-c--ceeecCHHHHHHHHHHHHhCCCccccE-EEE
Q 024300 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQ-----FSNHTGYPT-F--KGQVLNGQQLCDLIEGLEANNLLYYTH-LLT 92 (269)
Q Consensus 25 ~~g~~G~~a---~~~~l~~~Gv~~~~i~~~~-----~~~~~g~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~ 92 (269)
..|.+|.+. +++.|++.||+++++.... +....|-.. + .+..+++++++.+.+.+.. +-.+++ ++.
T Consensus 55 ~~~~vG~~~g~~i~~~l~~~gv~~~~v~~~~~t~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~v~~~ 132 (306)
T 2jg5_A 55 ALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKTGQETEINAPGPHITSTQFEQLLQQIKN--TTSEDIVIVA 132 (306)
T ss_dssp EEEEECHHHHHHHHHHHHHTTCEECCEECSSCCEEEEEEESSSEEEEECCCCCCCHHHHHHHHHHHTT--CCTTCEEEEE
T ss_pred EEEEecCcchHHHHHHHHHCCCceeEEEcCCCCeEEEEEcCCCEEEEECCCCCCCHHHHHHHHHHHHh--ccCCCEEEEe
Confidence 456666522 5667899999988774321 000122111 1 1234677787776665532 112554 445
Q ss_pred cccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccC-CCcEEcCCHHHHHHhhCCCCCCH
Q 024300 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-VASMLTPNQFEAEQLTGFRIGSE 171 (269)
Q Consensus 93 G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~-~~dii~pN~~E~~~l~g~~~~~~ 171 (269)
|+++.....+.+.++++.++++ ++++++||+.. .+.+ +++ ++|+++||++|++.|+|....+.
T Consensus 133 g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~~~~-~l~~~~dil~~N~~E~~~l~g~~~~~~ 196 (306)
T 2jg5_A 133 GSVPSSIPSDAYAQIAQITAQT--GAKLVVDAEKE-------------LAES-VLPYHPLFIKPNKDELEVMFNTTVNSD 196 (306)
T ss_dssp SCCCTTSCTTHHHHHHHHHHHH--CCEEEEECCHH-------------HHHH-HGGGCCSEECCBHHHHHHHTTSCCCSH
T ss_pred CCCCCCCChHHHHHHHHHHHHC--CCEEEEECChH-------------HHHH-HHhcCCeEEecCHHHHHHHhCCCCCCH
Confidence 7776544456777888899888 89999999532 1233 566 69999999999999999877677
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhccCCCCH
Q 024300 172 ADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNKYRDNL 250 (269)
Q Consensus 172 ~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~~g~~~ 250 (269)
++..++++.|.+.|++.|++|+| .+|++++.. ++.++++.++++ +||+||||+|+|+|+++|++ |+++
T Consensus 197 ~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~-g~~~ 265 (306)
T 2jg5_A 197 ADVIKYGRLLVDKGAQSVIVSLG-GDGAIYIDK---------EISIKAVNPQGKVVNTVGSGDSTVAGMVAGIAS-GLSI 265 (306)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECG-GGCEEEECS---------SEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHT-TCCH
T ss_pred HHHHHHHHHHHHcCCCEEEEccC-CCceEEEeC---------CcEEEEeCCcccccCCcChHHHHHHHHHHHHHc-CCCH
Confidence 78888999999999999999998 689887643 246677877777 69999999999999999998 9999
Q ss_pred HHHHHHHHHHHHHHhhc
Q 024300 251 DIAAELAVSSLQVLLLL 267 (269)
Q Consensus 251 ~~a~~~A~~~~~~~l~~ 267 (269)
++|+++|+++++..+++
T Consensus 266 ~~a~~~A~a~aa~~v~~ 282 (306)
T 2jg5_A 266 EKAFQQAVACGTATAFD 282 (306)
T ss_dssp HHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999998876
No 23
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.92 E-value=1.7e-24 Score=189.41 Aligned_cols=209 Identities=20% Similarity=0.176 Sum_probs=152.6
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE---------eecCCCCCCc--c----eeecCHHHHHHHHHHHHhCCCc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ---------FSNHTGYPTF--K----GQVLNGQQLCDLIEGLEANNLL 85 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~---------~~~~~g~~~~--~----~~~~~~~~~~~~~~~~~~~~~~ 85 (269)
..|.+|.|. +++.|++.||+++.+.... ..+..|-..+ . ...++++.++...+.+..
T Consensus 61 ~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 136 (328)
T 3kzh_A 61 FMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDSKREIFEN---- 136 (328)
T ss_dssp EECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHHTHHHHHT----
T ss_pred EEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHHHHHhhcc----
Confidence 577777764 5667899999887653221 0011221111 0 123555666655556664
Q ss_pred cccEEEE-cccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhh
Q 024300 86 YYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (269)
Q Consensus 86 ~~~~i~~-G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~ 164 (269)
++.+.+ |.++ +.+..+++ ++++ ++++++||+... ..+.+++ +++++|+++||+.|++.|+
T Consensus 137 -~~~~~~~~~~~-----~~~~~l~~-a~~~--~~~v~~D~~~~~---------~~~~~~~-~l~~~dil~~N~~E~~~l~ 197 (328)
T 3kzh_A 137 -AEYTVLDSDNP-----EIMEYLLK-NFKD--KTNFILDPVSAE---------KASWVKH-LIKDFHTIKPNRHEAEILA 197 (328)
T ss_dssp -CSEEEEESSCH-----HHHHHHHH-HHTT--TSEEEEECCSHH---------HHHTSTT-TGGGCSEECCBHHHHHHHH
T ss_pred -CCEEEEeCCcH-----HHHHHHHH-Hhhc--CCcEEEEeCCHH---------HHHHHHH-HhcCCcEEeCCHHHHHHHH
Confidence 344444 3322 55555666 7666 899999996542 1122233 7889999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhh
Q 024300 165 GFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWS 243 (269)
Q Consensus 165 g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l 243 (269)
|.+..+.++.+++++.|.+.|++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+++|
T Consensus 198 g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l 267 (328)
T 3kzh_A 198 GFPITDTDDLIKASNYFLGLGIKKVFISLD-ADGIFYNDG---------VSCGKIKATEVDVKNVTGAGDSFVAGLGYGY 267 (328)
T ss_dssp TSCCCSHHHHHHHHHHHHHHTCCEEEEECG-GGCEEEECS---------SCEEEEEESSCCCSCCTTHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEEeC-CCCEEEEeC---------CceEEecCCCcccCCCCChhHHHHHHHHHHH
Confidence 988877888999999999999999999998 689888743 256678887777 699999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 244 NKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 244 ~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
++ |+++++|+++|+++++..+++
T Consensus 268 ~~-g~~~~~a~~~A~a~aa~~v~~ 290 (328)
T 3kzh_A 268 MN-KMPIEDIVKFAMTMSNITISH 290 (328)
T ss_dssp HT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred Hc-CCCHHHHHHHHHHHHHHHhcC
Confidence 98 999999999999999998875
No 24
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.92 E-value=3.3e-24 Score=187.84 Aligned_cols=215 Identities=14% Similarity=0.103 Sum_probs=154.6
Q ss_pred ccCcccccc---chHHHHhcCCceeeeceEE-------eecCCCCCCc--ceeecCHHHHHHHHHHHHhCCCccccEEE-
Q 024300 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQ-------FSNHTGYPTF--KGQVLNGQQLCDLIEGLEANNLLYYTHLL- 91 (269)
Q Consensus 25 ~~g~~G~~a---~~~~l~~~Gv~~~~i~~~~-------~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~- 91 (269)
..|.+|.+. +++.|++.||+++.+.... +.+......+ .+..+++++++.+.+.+.+. +-.++++.
T Consensus 75 ~i~~vG~~~G~~l~~~L~~~gV~~~~v~~~~~t~~~~~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~v~~ 153 (330)
T 2jg1_A 75 ASGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEILEQGPEIDNQEAAGFIKHFEQM-MEKVEAVAI 153 (330)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCEECCEEESSCCEEEEEEEETTEEEEEEECCCBCCHHHHHHHHHHHHHH-GGGCSEEEE
T ss_pred EEEEecchhHHHHHHHHHHCCCceeEEEccCCCeeEEEEEeCCCcEEEECCCCCCCHHHHHHHHHHHHHh-cCCCCEEEE
Confidence 456666422 5667899999988774321 0011010011 12346777776655433210 00245544
Q ss_pred EcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccC---CCcEEcCCHHHHHHhhCCCC
Q 024300 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP---VASMLTPNQFEAEQLTGFRI 168 (269)
Q Consensus 92 ~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~---~~dii~pN~~E~~~l~g~~~ 168 (269)
.|+++.....+.+.++++.++++ +++++|||+.. .+++ +++ ++|+++||++|+..|+|...
T Consensus 154 ~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~l~~-~l~~~~~~dil~~N~~E~~~l~g~~~ 217 (330)
T 2jg1_A 154 SGSLPKGLNQDYYAQIIERCQNK--GVPVILDCSGA-------------TLQT-VLENPYKPTVIKPNISELYQLLNQPL 217 (330)
T ss_dssp ESCCCBTSCTTHHHHHHHHHHTT--TCCEEEECCHH-------------HHHH-HHTSSSCCSEECCBHHHHHHHTTSCC
T ss_pred ECCCCCCCCHHHHHHHHHHHHHC--CCEEEEECCcH-------------HHHH-HHhccCCceEEEeCHHHHHHHhCCCC
Confidence 47766444456778889999987 89999999532 1233 444 89999999999999999765
Q ss_pred C-CHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhccC
Q 024300 169 G-SEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNKY 246 (269)
Q Consensus 169 ~-~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~~ 246 (269)
. +.++.+++++.|.++|++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+++|++
T Consensus 218 ~~~~~~~~~~~~~l~~~g~~~VvvT~G-~~Ga~~~~~---------~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~- 286 (330)
T 2jg1_A 218 DESLESLKQAVSQPLFEGIEWIIVSLG-AQGAFAKHN---------HTFYRVNIPTISVLNPVGSGDSTVAGITSAILN- 286 (330)
T ss_dssp CCCHHHHHHHHHSGGGTTCSEEEEECG-GGCEEEEET---------TEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHT-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeec-CCceEEEeC---------CCEEEEeCCCccccCCCcHHHHHHHHHHHHHHc-
Confidence 4 5678888889998889999999998 689988753 256677877777 69999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHhhc
Q 024300 247 RDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 247 g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+++++|+++|++++...+++
T Consensus 287 g~~l~~al~~A~a~aa~~v~~ 307 (330)
T 2jg1_A 287 HENDHDLLKKANTLGMLNAQE 307 (330)
T ss_dssp TCCHHHHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHHHhcC
Confidence 999999999999999998875
No 25
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.92 E-value=4e-25 Score=196.61 Aligned_cols=219 Identities=11% Similarity=0.086 Sum_probs=159.4
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE--------eecCCCCCCc---ce--eecCHHHHHH--HHHHHHhCCCc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ--------FSNHTGYPTF---KG--QVLNGQQLCD--LIEGLEANNLL 85 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~--------~~~~~g~~~~---~~--~~~~~~~~~~--~~~~~~~~~~~ 85 (269)
..|.+|.|. +++.|++.||+++.+.... +....|-..+ .| ..++.++++. ..+.+.+.
T Consensus 103 ~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~--- 179 (370)
T 3vas_A 103 YVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKA--- 179 (370)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHC---
T ss_pred EEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEeCCceeEEEccchhhhCCHHHcCchhhHHHHhhC---
Confidence 566777665 6677899999988775311 0001221111 12 2456666653 23455654
Q ss_pred cccEEE-EcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhh
Q 024300 86 YYTHLL-TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (269)
Q Consensus 86 ~~~~i~-~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~ 164 (269)
+++. .|+... ...+.+.++++.++++ ++++++||... ++.+...+.+.+ +++++|+++||+.|++.|+
T Consensus 180 --~~v~~~g~~~~-~~~~~~~~~~~~a~~~--g~~v~ld~~~~-----~~~~~~~~~l~~-ll~~~dil~~N~~Ea~~l~ 248 (370)
T 3vas_A 180 --QVYYIAGFVIN-TCYEGMLKIAKHSLEN--EKLFCFNLSAP-----FLSQFNTKEVDE-MISYSNIVFGNESEAEAYG 248 (370)
T ss_dssp --SEEEEEGGGHH-HHHHHHHHHHHHHHHT--TCEEEEECCCH-----HHHHHCHHHHHH-HHTTCSEEEEEHHHHHHHH
T ss_pred --CEEEEEeeecc-CCHHHHHHHHHHHHHc--CCEEEEECCcH-----HHHHHHHHHHHH-HHhhCCEEEcCHHHHHHHh
Confidence 4444 455432 4567888999999988 89999998421 112233445555 8899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc-------CCCeEEEEeeecCCcEEEE--eeeccCCCCCCceEEEEcccc---C-CCCCCc
Q 024300 165 GFRIGSEADGREACKILHAA-------GPAKVVITSINIDGNLFLI--GSHQKEKGQSPEQFKIVIPKI---P-AYFTGT 231 (269)
Q Consensus 165 g~~~~~~~~~~~a~~~l~~~-------g~~~Vvvt~g~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~---~-~dt~Ga 231 (269)
+....+.++.+++++.|.++ +++.|+||.| .+|++++. . ++.++++++++ + +||+||
T Consensus 249 g~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G-~~Ga~~~~~~~---------~~~~~~~~~~v~~~~vvDttGA 318 (370)
T 3vas_A 249 EVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRG-KNPLLYTDSSD---------SEIHQFMVEQFKDDQIIDTNGA 318 (370)
T ss_dssp HHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEET-TEEEEEEETTC---------SSCEEECCCCCCTTTCSCCTTH
T ss_pred cccCCCccCHHHHHHHHHhhcccccccCCCEEEEecC-CCceEEEEcCC---------CeEEEEecccccCCCcCCCCCh
Confidence 87555557888999999875 8999999998 68998876 3 25667887776 5 699999
Q ss_pred hHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhcC
Q 024300 232 GDLMTALLLGWSNKYRDNLDIAAELAVSSLQVLLLLM 268 (269)
Q Consensus 232 GDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~~ 268 (269)
||+|+|+|+++|++ |+++++|+++|+++++.++++.
T Consensus 319 GDaF~ag~l~~l~~-g~~l~~a~~~A~aaAa~~v~~~ 354 (370)
T 3vas_A 319 GDAFAAGFIADYIR-GKPMITSLHAAVKAAAYIICRS 354 (370)
T ss_dssp HHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHccc
Confidence 99999999999999 9999999999999999988763
No 26
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.92 E-value=6.9e-25 Score=192.10 Aligned_cols=219 Identities=15% Similarity=0.136 Sum_probs=152.8
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCCCCCCc-----------------ceeecCHHHHHHHHHHHHhCC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTF-----------------KGQVLNGQQLCDLIEGLEANN 83 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~-----------------~~~~~~~~~~~~~~~~~~~~~ 83 (269)
..|.+|.|. +++.|+++||+++++....-...|+...+ ....+++++++. ..+.+
T Consensus 63 ~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~--~~~~~-- 138 (332)
T 2qcv_A 63 FIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNE--AYIRR-- 138 (332)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCH--HHHTT--
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCH--HHHcc--
Confidence 456666654 56678999999887653210012321110 011233344432 12332
Q ss_pred CccccEE-EEcccCC-hhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCCh-hhHHHHHHhccCCCcEEcCCHHHH
Q 024300 84 LLYYTHL-LTGYIGS-VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPS-ELVSVYREKVVPVASMLTPNQFEA 160 (269)
Q Consensus 84 ~~~~~~i-~~G~l~~-~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~-~~~~~~~~~ll~~~dii~pN~~E~ 160 (269)
++.+ ..|+++. ....+.+.++++.++++ ++++++||+++.. .|..+ +..+.+++ +++++|+++||++|+
T Consensus 139 ---~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~E~ 210 (332)
T 2qcv_A 139 ---SKLLLVSGTALSKSPSREAVLKAIRLAKRN--DVKVVFELDYRPY--SWETPEETAVYYSL-VAEQSDIVIGTREEF 210 (332)
T ss_dssp ---EEEEEEEGGGGSSTTHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSSCHHHHHHHHHH-HHHHCSEEEEEHHHH
T ss_pred ---CCEEEEeCccccCchhHHHHHHHHHHHHHC--CCEEEEcCcCchh--hcCCHHHHHHHHHH-HHHhCCEEEccHHHH
Confidence 4544 4566543 23457788889999987 8999999987632 33332 23344444 889999999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHH
Q 024300 161 EQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALL 239 (269)
Q Consensus 161 ~~l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~ 239 (269)
+.|+|.... ++..++++.|++.|++.|++|.| .+|++++... ++.++++.++++ +||+||||+|+|+|
T Consensus 211 ~~l~g~~~~--~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~~--------~~~~~~~~~~v~vvdt~GAGDaf~a~~ 279 (332)
T 2qcv_A 211 DVLENRTEK--GDNDETIRYLFKHSPELIVIKHG-VEGSFAYTKA--------GEAYRGYAYKTKVLKTFGAGDSYASAF 279 (332)
T ss_dssp HHHTTCSSC--CCHHHHHHHHTTSSCSEEEEECG-GGCEEEEETT--------SCEEEECCBCCCCSCCTTHHHHHHHHH
T ss_pred HHHhCCCcC--CCHHHHHHHHHHcCCCEEEEEEC-CcceEEEecC--------CceEEcCCCCccccCCCCcHHHHHHHH
Confidence 999987531 34467788888889999999998 6898877531 146677777777 69999999999999
Q ss_pred HHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 240 LGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 240 ~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+++|++ |+++++|+++|+++++..+++
T Consensus 280 ~~~l~~-g~~~~~a~~~A~~~aa~~v~~ 306 (332)
T 2qcv_A 280 LYALIS-GKGIETALKYGSASASIVVSK 306 (332)
T ss_dssp HHHHHT-TCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHHHHcc
Confidence 999998 999999999999999998875
No 27
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.92 E-value=3.1e-24 Score=189.62 Aligned_cols=135 Identities=21% Similarity=0.204 Sum_probs=116.4
Q ss_pred HHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHh
Q 024300 104 ILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHA 183 (269)
Q Consensus 104 i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~~~~~~~~~a~~~l~~ 183 (269)
+.++++.++++ ++++++||++.. | .+++++|+++||+.|++.|+| ...+.++++++++.|.+
T Consensus 203 ~~~~~~~a~~~--g~~v~~D~~~~~----~-----------~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l~~ 264 (352)
T 4e84_A 203 VTTMIEKARAA--GKAVLVDPKGDD----W-----------ARYRGASLITPNRAELREVVG-QWKSEDDLRARVANLRA 264 (352)
T ss_dssp HHHHHHHHHHT--TCEEEEECCSSC----C-----------STTTTCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc--CCEEEEECCCcc----h-----------hhccCCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHHHH
Confidence 66788889888 999999996531 1 268899999999999999999 55567888889999885
Q ss_pred -cCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhccCCCCHHHHHHHHHHHH
Q 024300 184 -AGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSL 261 (269)
Q Consensus 184 -~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~~g~~~~~a~~~A~~~~ 261 (269)
.|++.|++|.| .+|++++.+ ++.+++++++++ +||+||||+|+|+|+++|++ |+++++|+++|++++
T Consensus 265 ~~g~~~VvvT~G-~~Ga~~~~~---------~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~-g~~l~~al~~A~aaa 333 (352)
T 4e84_A 265 ELDIDALLLTRS-EEGMTLFSA---------GGELHAPALAREVFDVSGAGDTVIATVATMLGA-GVPLVDAVVLANRAA 333 (352)
T ss_dssp HHTCSEEEEECG-GGCEEEEET---------TEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHH
T ss_pred HhCCCEEEEEcC-CCcEEEEEC---------CceEEecCCCcCccCCccccHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 79999999998 789988753 356778887777 69999999999999999998 999999999999999
Q ss_pred HHHhhc
Q 024300 262 QVLLLL 267 (269)
Q Consensus 262 ~~~l~~ 267 (269)
+.++++
T Consensus 334 a~~v~~ 339 (352)
T 4e84_A 334 GIVVGK 339 (352)
T ss_dssp HHHHTS
T ss_pred HHHhcC
Confidence 998875
No 28
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.92 E-value=2.6e-24 Score=189.89 Aligned_cols=219 Identities=15% Similarity=0.070 Sum_probs=154.1
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCCCC----------CC-c--c--e---eecCHHHHHHHHHHHHhC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGY----------PT-F--K--G---QVLNGQQLCDLIEGLEAN 82 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~g~----------~~-~--~--~---~~~~~~~~~~~~~~~~~~ 82 (269)
..|.+|.|. +++.|++.||++..+.... ..|+. .. + . + ..++.++++. .+.+.
T Consensus 63 ~i~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~--~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~-~~~~~-- 137 (351)
T 2afb_A 63 FVTKLPNNPLGDAAAGHLRKFGVKTDYIARGG--NRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDW-EKILD-- 137 (351)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECS--SCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCH-HHHTT--
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCcceeEEECC--CcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCH-HHhhc--
Confidence 467777765 5667899999988775311 12221 00 1 0 0 1123333321 11123
Q ss_pred CCccccEEEE-cccC--ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHH
Q 024300 83 NLLYYTHLLT-GYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (269)
Q Consensus 83 ~~~~~~~i~~-G~l~--~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E 159 (269)
.++++.+ |+.+ ++...+.+.++++.++++ +++++|||+++.. .|..++..+.+.+ +++++|+++||+.|
T Consensus 138 ---~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~-ll~~~dil~~N~~E 209 (351)
T 2afb_A 138 ---GARWFHFSGITPPLGKELPLILEDALKVANEK--GVTVSCDLNYRAR--LWTKEEAQKVMIP-FMEYVDVLIANEED 209 (351)
T ss_dssp ---TEEEEEEETTSGGGSTTHHHHHHHHHHHHHHH--TCEEEEECCCCTT--TCCHHHHHHHHHH-HGGGCSEEEECHHH
T ss_pred ---CCCEEEEeCcccccChhHHHHHHHHHHHHHHc--CCEEEEeCCCchh--cCChHHHHHHHHH-HHhhCCEEEecHHH
Confidence 2565554 4443 334567888999999988 8999999998643 3322234455555 89999999999999
Q ss_pred HHHhhCCCCC---------CHHHHHHHHHHHHhc-CCCeEEEEeeecCCc--------EEEEeeeccCCCCCCceEEEEc
Q 024300 160 AEQLTGFRIG---------SEADGREACKILHAA-GPAKVVITSINIDGN--------LFLIGSHQKEKGQSPEQFKIVI 221 (269)
Q Consensus 160 ~~~l~g~~~~---------~~~~~~~a~~~l~~~-g~~~Vvvt~g~~~g~--------~~~~~~~~~~~~~~~~~~~~~~ 221 (269)
++.|+|.... +.+++.++++.|.+. |++.|++|.| .+|+ +++.. ++.+++++
T Consensus 210 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G-~~G~~~~~~~g~~~~~~---------~~~~~~~~ 279 (351)
T 2afb_A 210 IEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLR-ESISATVNYWSVMVFEN---------GQPHFSNR 279 (351)
T ss_dssp HHHHHCCCCSCC-------CHHHHHHHHHHHHHHHCCSEEEEEEE-ECSCSSEEEEEEEEEET---------TEEEECCC
T ss_pred HHHHhCCCcccccccccccchhhHHHHHHHHHHHcCCCEEEEEeC-CcCccccccceeEEEeC---------CcEEEcCC
Confidence 9999997653 566788888888874 9999999998 5764 44432 24556666
Q ss_pred cccC-CCCCCchHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 222 PKIP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 222 ~~~~-~dt~GaGDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
++++ +||+||||+|+|+|+++|++ |+++++|+++|++++..++++
T Consensus 280 ~~v~vvdttGAGDaF~ag~~~~l~~-g~~l~~a~~~A~~~aa~~v~~ 325 (351)
T 2afb_A 280 YEIHIVDRVGAGDSFAGALIYGSLM-GFDSQKKAEFAAAASCLKHTI 325 (351)
T ss_dssp EEEECSCCTTHHHHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCccCCCCCchHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCC
Confidence 6666 69999999999999999999 999999999999999998875
No 29
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.92 E-value=6.2e-25 Score=193.62 Aligned_cols=218 Identities=15% Similarity=0.219 Sum_probs=155.1
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCCC---------CCCc---ce--eecCHHHHHH--HHHHHHhCCC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG---------YPTF---KG--QVLNGQQLCD--LIEGLEANNL 84 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~g---------~~~~---~~--~~~~~~~~~~--~~~~~~~~~~ 84 (269)
..|.+|.|. +++.|++.||+++++.... .+|+ -..+ .+ ..+++++++. ..+.+.+.++
T Consensus 88 ~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~--~~T~~~~i~~~~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~ 165 (347)
T 3otx_A 88 YVGCIADDRYGKVLKEAAEHEGIVMAVEHTTK--AGSGACAVCITGKERTLVADLGAANHLSSEHMRSPAVVRAMDESRI 165 (347)
T ss_dssp EECEECSSHHHHHHHHHHHHHTCEECCEECSS--SCEEEEEEEEETTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEEecCChHHHHHHHHHHHCCCceecccCCC--CCCeEEEEEEECCceeeeechhhhhcCCHHHcCchhhHHHHhhCCE
Confidence 567777764 6677899999998774211 1122 1111 11 1355666643 2345665443
Q ss_pred ccccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhh
Q 024300 85 LYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (269)
Q Consensus 85 ~~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~ 164 (269)
+ ++.|+... ...+.+.++++.++++ ++++++||... ++.+...+.+.+ +++++|+++||+.|++.|+
T Consensus 166 ~----~~~g~~~~-~~~~~~~~~~~~a~~~--g~~v~~d~~~~-----~~~~~~~~~l~~-~l~~~dil~~N~~Ea~~l~ 232 (347)
T 3otx_A 166 F----YFSGFTLT-VDVNHVLQACRKAREV--DGLFMINLSAP-----FIMQFFSAQLGE-VLPYTDIIVANRHEAKEFA 232 (347)
T ss_dssp E----EEEGGGGG-TCHHHHHHHHHHHHHT--TCEEEEECCCH-----HHHHHCHHHHHH-HGGGCSEEEEEHHHHHHHH
T ss_pred E----EEeeeecc-cCHHHHHHHHHHHHHh--CCEEEeeCchh-----hhHHHHHHHHHH-HHhhCCEEecCHHHHHHHh
Confidence 2 34455433 3457788999999998 89999998421 112233445555 8899999999999999998
Q ss_pred CCCCCCHHHHHHHHHHHH------hcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEcccc---C-CCCCCchHH
Q 024300 165 GFRIGSEADGREACKILH------AAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI---P-AYFTGTGDL 234 (269)
Q Consensus 165 g~~~~~~~~~~~a~~~l~------~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~dt~GaGDa 234 (269)
+....+.++.+++++.|. +.+++.|++|.| .+|++++.. ++.++++.+++ + +||+||||+
T Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G-~~Ga~~~~~---------~~~~~~~~~~~~~~~vvDttGAGDa 302 (347)
T 3otx_A 233 NMMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRD-IESTVLATK---------DGVETVPVPQLDQDKVIDMNGAGDA 302 (347)
T ss_dssp HHHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEET-TEEEEEEET---------TEEEEECCCCCCGGGCCSSCCSHHH
T ss_pred cccCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeC-CCCeEEEEC---------CeEEEEEecccCCCCCCCCCChHHH
Confidence 754333356777888887 468999999998 789888753 25666777665 4 699999999
Q ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhcC
Q 024300 235 MTALLLGWSNKYRDNLDIAAELAVSSLQVLLLLM 268 (269)
Q Consensus 235 f~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~~ 268 (269)
|+|+|+++|++ |+++++|+++|+++++.++++.
T Consensus 303 F~ag~l~~l~~-g~~l~~a~~~a~~~aa~~v~~~ 335 (347)
T 3otx_A 303 FMGGFLSAYAV-GKDLRRCCETGHYTAQEVIQRD 335 (347)
T ss_dssp HHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHccc
Confidence 99999999999 9999999999999999998763
No 30
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.91 E-value=9.6e-24 Score=184.27 Aligned_cols=215 Identities=16% Similarity=0.112 Sum_probs=154.3
Q ss_pred ccCcccccc---chHHHHhcCCceeeeceEE-------eecCCCCCCc--ceeecCHHHHHHHHHHHHhCCCccccEEE-
Q 024300 25 VQGYVGNKS---AVFPLQLLGYDVDPIHSVQ-------FSNHTGYPTF--KGQVLNGQQLCDLIEGLEANNLLYYTHLL- 91 (269)
Q Consensus 25 ~~g~~G~~a---~~~~l~~~Gv~~~~i~~~~-------~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~- 91 (269)
..|.+|.+. +++.|++.||+++.+.... +.+......+ .+..+++++++.+.+.+.+. +-.++++.
T Consensus 57 ~~~~vG~~~G~~i~~~L~~~gV~~~~v~~~~~t~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~-~~~~~~v~~ 135 (323)
T 2f02_A 57 ATGVLGGFHGAFIANELKKANIPQAFTSIKEETRDSIAILHEGNQTEILEAGPTVSPEEISNFLENFDQL-IKQAEIVTI 135 (323)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCCBCCEEESSCCEEEEEEEETTEEEEEEECCCBCCHHHHHHHHHHHHHH-HTTCSEEEE
T ss_pred EEEEeccchHHHHHHHHHHCCCceeEEEcCCCCeeEEEEEcCCCeEEEECCCCCCCHHHHHHHHHHHHHh-ccCCCEEEE
Confidence 456666432 5667899999988764321 0011000001 12346777776655433210 00255554
Q ss_pred EcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhcc---CCCcEEcCCHHHHHHhhCCCC
Q 024300 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV---PVASMLTPNQFEAEQLTGFRI 168 (269)
Q Consensus 92 ~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll---~~~dii~pN~~E~~~l~g~~~ 168 (269)
.|+++.....+.+.++++.++++ +++++|||+.. . +++ ++ +++|+++||++|++.|+|...
T Consensus 136 ~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~---------~----~~~-~l~~~~~~dil~~N~~E~~~l~g~~~ 199 (323)
T 2f02_A 136 SGSLAKGLPSDFYQELVQKAHAQ--EVKVLLDTSGD---------S----LRQ-VLQGPWKPYLIKPNLEELEGLLGQDF 199 (323)
T ss_dssp ESCCCBTSCTTHHHHHHHHHHHT--TCEEEEECCTH---------H----HHH-HHHSSCCCSEECCBHHHHHHHHTCCC
T ss_pred ECCCCCCCChHHHHHHHHHHHHC--CCEEEEECChH---------H----HHH-HHhccCCCeEEecCHHHHHHHhCCCC
Confidence 58776544456778889999987 89999999532 1 222 33 699999999999999999765
Q ss_pred C-CH-HHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhcc
Q 024300 169 G-SE-ADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNK 245 (269)
Q Consensus 169 ~-~~-~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~ 245 (269)
. +. ++..++++.|.++|++.|++|.| .+|++++.. ++.++++.++++ +||+||||+|+|+|+++|++
T Consensus 200 ~~~~~~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~ 269 (323)
T 2f02_A 200 SENPLAAVQTALTKPMFAGIEWIVISLG-KDGAIAKHH---------DQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAK 269 (323)
T ss_dssp CSSCHHHHHHHHTSGGGTTCSEEEEECG-GGCEEEEET---------TEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEeec-CCceEEEeC---------CCEEEEcCCCccccCCccHHHHHHHHHHHHHHc
Confidence 4 44 67778888888889999999998 689887753 256677887777 69999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHhhc
Q 024300 246 YRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 246 ~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+++++|+++|+++++..+++
T Consensus 270 -g~~~~~a~~~A~~~aa~~v~~ 290 (323)
T 2f02_A 270 -DAPAAELLKWGMAAGMANAQE 290 (323)
T ss_dssp -TCCHHHHHHHHHHHHHHHHHS
T ss_pred -CCCHHHHHHHHHHHHHHHHcC
Confidence 999999999999999998875
No 31
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.91 E-value=1e-23 Score=183.84 Aligned_cols=209 Identities=13% Similarity=0.141 Sum_probs=151.8
Q ss_pred ccCcccccc---chHHHHhcCCceeee-ceEE-------eecCCCC--CCc---ceeecCHHHHHHHHHHHHhCCCcccc
Q 024300 25 VQGYVGNKS---AVFPLQLLGYDVDPI-HSVQ-------FSNHTGY--PTF---KGQVLNGQQLCDLIEGLEANNLLYYT 88 (269)
Q Consensus 25 ~~g~~G~~a---~~~~l~~~Gv~~~~i-~~~~-------~~~~~g~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (269)
..|.+|.+. +++.|++.||+++.+ .... ..+ .|- ..+ .+..+++++++.+++.+.+.. -.++
T Consensus 58 ~i~~vG~d~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~ 135 (320)
T 3ie7_A 58 ALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLS-DDTNGSTMIPEAGFTVSQTNKDNLLKQIAKKV-KKED 135 (320)
T ss_dssp EEEEEESTTHHHHHHHHHHTTCCBCCEEETTCCCEEEEEEEE-TTCSCCEEEECCCCCCCHHHHHHHHHHHHHHC-CTTC
T ss_pred EEEEecCchHHHHHHHHHHcCCceEEEEecCCCCceEEEEEE-CCCceeEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCC
Confidence 456667653 566789999999888 2110 111 222 111 234567778877665554311 1356
Q ss_pred EEEE-cccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhcc-CCCcEEcCCHHHHHHhhCC
Q 024300 89 HLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV-PVASMLTPNQFEAEQLTGF 166 (269)
Q Consensus 89 ~i~~-G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll-~~~dii~pN~~E~~~l~g~ 166 (269)
++.+ |+++.....+.+.++++.++++ ++++++||+.. .+.+ .+ +++|+++||+.|++.|+|.
T Consensus 136 ~v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-------------~l~~-~l~~~~dil~~N~~E~~~l~g~ 199 (320)
T 3ie7_A 136 MVVIAGSPPPHYTLSDFKELLRTVKAT--GAFLGCDNSGE-------------YLNL-AVEMGVDFIKPNEDEVIAILDE 199 (320)
T ss_dssp EEEEESCCCTTCCHHHHHHHHHHHHHH--TCEEEEECCHH-------------HHHH-HHHHCCSEECCBTTGGGGGSCT
T ss_pred EEEEeCCCCCCCCHHHHHHHHHHHHhc--CCEEEEECChH-------------HHHH-HHhcCCeEEeeCHHHHHHHhCC
Confidence 6665 8887656678888999999988 89999999542 1223 34 3899999999999999998
Q ss_pred CCC-CHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhc
Q 024300 167 RIG-SEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSN 244 (269)
Q Consensus 167 ~~~-~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~ 244 (269)
+.. +.+++.+ +.+. ++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+++|+
T Consensus 200 ~~~~~~~~~~~----~~~~-~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~ 264 (320)
T 3ie7_A 200 KTNSLEENIRT----LAEK-IPYLVVSLG-AKGSICAHN---------GKLYQVIPPKVQERNDTGAGDVFVGAFIAGLA 264 (320)
T ss_dssp TCCCHHHHHHH----HTTT-CSEEEEECG-GGCEEEEET---------TEEEEEECCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred CcCCCHHHHHH----HHhh-CCEEEEEcC-CCceEEEeC---------CcEEEEeCCccCCCCCcCchHHHHHHHHHHHH
Confidence 654 2333333 3333 899999998 689988754 356778888777 6999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhhc
Q 024300 245 KYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 245 ~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+ |+++++|+++|+++++..+++
T Consensus 265 ~-g~~~~~a~~~A~a~aa~~v~~ 286 (320)
T 3ie7_A 265 M-NMPITETLKVATGCSASKVMQ 286 (320)
T ss_dssp T-TCCHHHHHHHHHHHHHHHHTS
T ss_pred c-CCCHHHHHHHHHHHHHHHHhC
Confidence 8 999999999999999988875
No 32
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.91 E-value=1.9e-25 Score=196.23 Aligned_cols=217 Identities=10% Similarity=0.071 Sum_probs=147.1
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE--------e-ecCCCCCCc--c---ee--ecCHHHHHHHHHHHHhCCC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ--------F-SNHTGYPTF--K---GQ--VLNGQQLCDLIEGLEANNL 84 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~--------~-~~~~g~~~~--~---~~--~~~~~~~~~~~~~~~~~~~ 84 (269)
..|.+|.|. +++.|+++||+++++.... + .+..|-..+ + +. .+++++++. +.+.+
T Consensus 55 ~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~--~~~~~--- 129 (338)
T 3ljs_A 55 FVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQD--ASFSD--- 129 (338)
T ss_dssp EESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCH--HHHHT---
T ss_pred EEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCH--hHhcC---
Confidence 578888774 5677899999988775421 0 011222211 0 11 244444443 23443
Q ss_pred ccccEEEEc--ccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccC-ChhhHHHHHHhccCCCcEEcCCHHHHH
Q 024300 85 LYYTHLLTG--YIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV-PSELVSVYREKVVPVASMLTPNQFEAE 161 (269)
Q Consensus 85 ~~~~~i~~G--~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~-~~~~~~~~~~~ll~~~dii~pN~~E~~ 161 (269)
++.+.++ .+.++...+.+.++++.++++ +++++|||+++.. +|. .+...+.+++ +++++|+++||++|++
T Consensus 130 --~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~E~~ 202 (338)
T 3ljs_A 130 --ALIFHACSNSMTDADIAEVTFEGMRRAQAA--GAIVSFDLNFRPM--LWPNGENPASRLWK-GLSLADVVKLSSEELD 202 (338)
T ss_dssp --EEEEEEEGGGGSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSCTTCCTHHHHHH-HHHTCSEEEEEHHHHH
T ss_pred --CCEEEECChHhcCchHHHHHHHHHHHHHHc--CCEEEEECCCChh--hcCCHHHHHHHHHH-HHhhCCEEEecHHHHH
Confidence 3444443 345666778899999999998 8999999988743 442 2344555665 8899999999999999
Q ss_pred HhhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHH
Q 024300 162 QLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLL 240 (269)
Q Consensus 162 ~l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~ 240 (269)
.|+|...... +++++.|++.|++.|+||.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+
T Consensus 203 ~l~g~~~~~~---~~~~~~l~~~g~~~vvvT~G-~~G~~~~~~---------~~~~~~~~~~v~vvDttGAGDaF~a~~~ 269 (338)
T 3ljs_A 203 YLANTLAADA---NAVIQQLWQGRAQLLLVTDA-AGPVHWYTR---------TAGGEVPTFRVQVQDSNAAGDAFVGGML 269 (338)
T ss_dssp HHHHHHTSCH---HHHHHHHTTTTCCEEEEEET-TEEEEEEES---------SCEEEECC-----------CHHHHHHHH
T ss_pred HHhCCCChhH---HHHHHHHHhcCCCEEEEeeC-CCceEEEEC---------CceEEeCCCCCccCCCCCccHHHHHHHH
Confidence 9998532221 23788888889999999998 689888754 256678877777 699999999999999
Q ss_pred HhhccCC--------------CCHHHHHHHHHHHHHHHhhc
Q 024300 241 GWSNKYR--------------DNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 241 ~~l~~~g--------------~~~~~a~~~A~~~~~~~l~~ 267 (269)
++|++ | +++++|+++|+++++.++++
T Consensus 270 ~~l~~-g~~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~ 309 (338)
T 3ljs_A 270 YTFAQ-QFDDAAALIDFCHDPESIVSTLRFAAAVGALAVTR 309 (338)
T ss_dssp HHHHH-HCSSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC--
T ss_pred HHHHh-CCCcccchhccccChHHHHHHHHHHHHHHHHHhCC
Confidence 99998 8 89999999999999887765
No 33
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.91 E-value=5.7e-24 Score=185.28 Aligned_cols=214 Identities=14% Similarity=0.064 Sum_probs=150.1
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCCC----------CCCc--c------eeecCHHHHHHHHHHHHhC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG----------YPTF--K------GQVLNGQQLCDLIEGLEAN 82 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~g----------~~~~--~------~~~~~~~~~~~~~~~~~~~ 82 (269)
..|.+|.|. +++.|+++||+++++.... ...|+ -..+ + ...++.++++ .+.+.+.
T Consensus 60 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~-~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~ 136 (319)
T 3pl2_A 60 LLSRVGNDPFGEYLLAELERLGVDNQYVATDQ-TFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVS--LDDVREA 136 (319)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTEECTTEEEES-SSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSC--HHHHHHC
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCccccEEecC-CCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCC--HHHhccC
Confidence 467777654 5667899999988775321 01122 1111 0 1134444443 2345554
Q ss_pred CCccccEEEEcccCC-hhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCC-hhhHHHHHHhccCCCcEEcCCHHHH
Q 024300 83 NLLYYTHLLTGYIGS-VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVASMLTPNQFEA 160 (269)
Q Consensus 83 ~~~~~~~i~~G~l~~-~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~-~~~~~~~~~~ll~~~dii~pN~~E~ 160 (269)
+++ +..|+... ....+.+..+++.+++ +.++++||+.+.. .|.. .+..+.+++ +++++|+++||+.|+
T Consensus 137 ~~~----~~~g~~~~~~~~~~~~~~~~~~~~~---~~~v~~D~~~~~~--~~~~~~~~~~~~~~-~l~~~dil~~N~~E~ 206 (319)
T 3pl2_A 137 DIL----WFTLTGFSEEPSRGTHREILTTRAN---RRHTIFDLDYRPM--FWESPEEATKQAEW-ALQHSTVAVGNKEEC 206 (319)
T ss_dssp SEE----EEEGGGGSSTTHHHHHHHHHHHHTT---CSCEEEECCCCGG--GSSCHHHHHHHHHH-HHTTCSEEEECHHHH
T ss_pred CEE----EEecccccCchhHHHHHHHHHHHHH---CCcEEEeCCCChh--hcCCHHHHHHHHHH-HHHhCCEEEcCHHHH
Confidence 432 23454332 2334555666666654 5678999987743 3433 233455555 899999999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHH
Q 024300 161 EQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALL 239 (269)
Q Consensus 161 ~~l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~ 239 (269)
+.|+|. ++.+++++.|.++|++.|++|.| .+|++++.. ++.++++.++++ +||+||||+|+|+|
T Consensus 207 ~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaf~a~~ 271 (319)
T 3pl2_A 207 EIAVGE-----TEPERAGRALLERGVELAIVKQG-PKGVMAMTK---------DETVEVPPFFVDVINGLGAGDAFGGAL 271 (319)
T ss_dssp HHHHSC-----CSHHHHHHHHHHTTCSEEEEEEE-TTEEEEECS---------SCEEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred HHHcCC-----CCHHHHHHHHHhcCCCEEEEEEC-CCCeEEEEC---------CceEEeCCcccCCCCCcCchHHHHHHH
Confidence 999996 35677888899999999999998 689887743 256778877777 69999999999999
Q ss_pred HHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 240 LGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 240 ~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+++|++ |+++++|+++|+++++..+++
T Consensus 272 ~~~l~~-g~~~~~a~~~A~~~aa~~v~~ 298 (319)
T 3pl2_A 272 CHGLLS-EWPLEKVLRFANTAGALVASR 298 (319)
T ss_dssp HHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHHHHhc
Confidence 999998 999999999999999998865
No 34
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.91 E-value=2e-24 Score=191.76 Aligned_cols=218 Identities=18% Similarity=0.182 Sum_probs=153.9
Q ss_pred cccCcccccc----chHHHHhcCCceeeeceEEeecCCCCC---------Cc---ce--eecCHHHHHH--HHHHHHhCC
Q 024300 24 TVQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYP---------TF---KG--QVLNGQQLCD--LIEGLEANN 83 (269)
Q Consensus 24 ~~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~g~~---------~~---~~--~~~~~~~~~~--~~~~~~~~~ 83 (269)
...|.+|.|. +++.|++.||+++++.... .+||.. .+ .+ ..+++++++. ..+.+.+.
T Consensus 101 ~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~--~~Tg~~~i~~~~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~- 177 (365)
T 3loo_A 101 IFFGCVGQDEYARILEERATSNGVNVQYQRSAT--SPTGTCAVLVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGA- 177 (365)
T ss_dssp EEEEEEESBHHHHHHHHHHHHHTCEEEEEEESS--SCCEEEEEEEETTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHC-
T ss_pred EEEEEecCCchHHHHHHHHHHCCCceeccccCC--CCCeEEEEEEECCceEEEeccchHhhCCHhHcCchhhHHHHhhC-
Confidence 3567777764 5667899999998875311 122211 11 01 1345555532 33445553
Q ss_pred CccccEE-EEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHH
Q 024300 84 LLYYTHL-LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (269)
Q Consensus 84 ~~~~~~i-~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~ 162 (269)
+.+ +.|+... ...+.+.++++.++++ ++++++||... ++.+...+.+.+ +++++|+++||+.|++.
T Consensus 178 ----~~v~i~G~~~~-~~~~~~~~~~~~a~~~--g~~v~~d~~~~-----~~~~~~~~~l~~-~l~~~dil~~N~~Ea~~ 244 (365)
T 3loo_A 178 ----QFFYVSGFFFT-VSFESALSVAKEAAAT--GRMFMMNLSAP-----FVPQFYKNNLEE-IFPYVDVLFGNETEAIA 244 (365)
T ss_dssp ----SEEEEEGGGHH-HHHHHHHHHHHHHHHT--TCEEEEECCST-----HHHHHCHHHHHH-HGGGCSEEEEEHHHHHH
T ss_pred ----CEEEEeeeecc-CCHHHHHHHHHHHHHc--CCEEEEECCch-----hhhHHHHHHHHH-HHHhCCEEecCHHHHHH
Confidence 444 4466443 3457788999999988 89999998321 112233445555 88999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHhc------CCCeEEEEeeecCCcEEEE-eeeccCCCCCCceEEEEcccc---C-CCCCCc
Q 024300 163 LTGFRIGSEADGREACKILHAA------GPAKVVITSINIDGNLFLI-GSHQKEKGQSPEQFKIVIPKI---P-AYFTGT 231 (269)
Q Consensus 163 l~g~~~~~~~~~~~a~~~l~~~------g~~~Vvvt~g~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---~-~dt~Ga 231 (269)
|++....+.++.+++++.|.++ +++.|++|.| .+|++++. .. ++.++++++++ + +||+||
T Consensus 245 l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G-~~Ga~~~~~~~--------~~~~~~~~~~v~~~~vvDttGA 315 (365)
T 3loo_A 245 LAKEFNYGTEDLREIGKRIAALPKENGKRKRIVIITQG-SDPVLLIEAGT--------DNVREFPVQKLAPEQMVDTNGA 315 (365)
T ss_dssp HHHHTTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEET-TEEEEEEETTC--------SCCEEECCCCCC------CTTH
T ss_pred HhcccCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeC-CCCEEEEEecC--------CeEEEEeccccCCCCccCCCCh
Confidence 9986544456778888888875 8899999998 78998873 11 25667877776 4 699999
Q ss_pred hHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 232 GDLMTALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 232 GDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 316 GDaF~agfl~~l~~-g~~l~~a~~~a~~~Aa~~v~~ 350 (365)
T 3loo_A 316 GDAFVGGFLAQLLQ-SRTVDVCIKCGIWAAREIIQR 350 (365)
T ss_dssp HHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHcC
Confidence 99999999999999 999999999999999998875
No 35
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.90 E-value=4.1e-24 Score=188.21 Aligned_cols=216 Identities=14% Similarity=0.084 Sum_probs=152.4
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCCCCCC---------c---ce--eecCHH-HHH--HHHHHHHhCC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPT---------F---KG--QVLNGQ-QLC--DLIEGLEANN 83 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~g~~~---------~---~~--~~~~~~-~~~--~~~~~~~~~~ 83 (269)
..|.+|.|. +++.|+++||+++++.... ..|+... + .+ ..++.+ +++ ...+.+.+
T Consensus 86 ~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~--~~T~~~~~~~~~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-- 161 (345)
T 1bx4_A 86 FFGCIGIDKFGEILKRKAAEAHVDAHYYEQNE--QPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEK-- 161 (345)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEEESS--SCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHH--
T ss_pred EEEEeCCChhHHHHHHHHHHcCCceeeeecCC--CCCceEEEEEcCCceEeeeccchHhhcCcccccCcHHHHHHHhh--
Confidence 345666664 5677899999998875211 1233110 1 00 123344 443 23344554
Q ss_pred CccccEEEE-cccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHH
Q 024300 84 LLYYTHLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (269)
Q Consensus 84 ~~~~~~i~~-G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~ 162 (269)
++++.+ |+.+. ...+.+.++++.++++ ++++++||... . +.++..+.+++ +++++|+++||++|++.
T Consensus 162 ---~~~v~~~g~~~~-~~~~~~~~~~~~a~~~--g~~v~~d~~~~----~-~~~~~~~~~~~-~l~~~dil~~N~~E~~~ 229 (345)
T 1bx4_A 162 ---ARVCYIAGFFLT-VSPESVLKVAHHASEN--NRIFTLNLSAP----F-ISQFYKESLMK-VMPYVDILFGNETEAAT 229 (345)
T ss_dssp ---CSEEEEEGGGGG-TCHHHHHHHHHHHHHT--TCEEEEECCSH----H-HHHHTHHHHHH-HGGGCSEEEEEHHHHHH
T ss_pred ---CCEEEEEEEecc-CCHHHHHHHHHHHHHc--CCEEEEeCCcH----H-HHHHHHHHHHH-HhccCCEEeCCHHHHHH
Confidence 344444 55432 3457788899999987 88999998522 1 12233445555 89999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHh------cCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEcccc---C-CCCCCch
Q 024300 163 LTGFRIGSEADGREACKILHA------AGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI---P-AYFTGTG 232 (269)
Q Consensus 163 l~g~~~~~~~~~~~a~~~l~~------~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~dt~GaG 232 (269)
|+|....+.++.+++++.|.+ .|++.|++|+| .+|++++.. ++.++++++++ + +||+|||
T Consensus 230 l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~~~~vvDttGAG 299 (345)
T 1bx4_A 230 FAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQG-RDDTIMATE---------SEVTAFAVLDQDQKEIIDTNGAG 299 (345)
T ss_dssp HHHHTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEET-TEEEEEECS---------SCEEEECCCCCCCTTCCCHHHHH
T ss_pred HhcccCCCCCCHHHHHHHHHhcccccccCCCEEEEEeC-CCCeEEEEC---------CeEEEEeccccCcCccccCCCcc
Confidence 987543334567888888888 58999999998 689887643 25667777666 5 6999999
Q ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 233 DLMTALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 233 Daf~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+|+|+|+++|++ |+++++|+++|++++..++++
T Consensus 300 Daf~ag~~~~l~~-g~~~~~a~~~A~~~aa~~v~~ 333 (345)
T 1bx4_A 300 DAFVGGFLSQLVS-DKPLTECIRAGHYAASIIIRR 333 (345)
T ss_dssp HHHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHhc
Confidence 9999999999998 999999999999999998875
No 36
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.90 E-value=1e-23 Score=182.99 Aligned_cols=210 Identities=19% Similarity=0.108 Sum_probs=146.2
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE------e--ecCCCCCCc--c-----eeecCHHHHHHHHHHHHhCCCc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ------F--SNHTGYPTF--K-----GQVLNGQQLCDLIEGLEANNLL 85 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~------~--~~~~g~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~ 85 (269)
..|.+|.|. +++.|+++||+++++.... + ....|-..+ . ...++.++++. +.+.
T Consensus 52 ~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~--~~~~----- 124 (309)
T 1v1a_A 52 FVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP--DYLE----- 124 (309)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCBCTTEEECSSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG--GGGT-----
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCCceEEEcCCCCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCCh--hHhc-----
Confidence 567777764 5667899999988765321 0 011121011 0 01222222221 1122
Q ss_pred cccEEE-EcccC--ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHH
Q 024300 86 YYTHLL-TGYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (269)
Q Consensus 86 ~~~~i~-~G~l~--~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~ 162 (269)
.++.+. .|+.+ ++...+.+.++++.++++ +++++|||+++.. +|..++..+.+++ +++++|+++||++|++.
T Consensus 125 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~ 199 (309)
T 1v1a_A 125 GVRFLHLSGITPALSPEARAFSLWAMEEAKRR--GVRVSLDVNYRQT--LWSPEEARGFLER-ALPGVDLLFLSEEEAEL 199 (309)
T ss_dssp TCSEEEEETTGGGSCHHHHHHHHHHHHHHHTT--TCEEEEECCCCTT--TSCHHHHHHHHHH-HGGGCSEEEEEHHHHHH
T ss_pred CCCEEEEeCchhccCchHHHHHHHHHHHHHHc--CCEEEEeCCCCcc--cCCHHHHHHHHHH-HHHhCCEEECcHHHHHH
Confidence 245554 45544 345667888899999987 8999999998743 3322344455555 89999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHH
Q 024300 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLG 241 (269)
Q Consensus 163 l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~ 241 (269)
|+|.+ +++++ +.|++.|++|.| .+|+++ ... ++.+++++++++ +||+||||+|+|+|++
T Consensus 200 l~g~~-------~~~~~---~~g~~~vvvt~G-~~G~~~-~~~--------~~~~~~~~~~v~vvdttGAGDaf~a~~~~ 259 (309)
T 1v1a_A 200 LFGRV-------EEALR---ALSAPEVVLKRG-AKGAWA-FVD--------GRRVEGSAFAVEAVDPVGAGDAFAAGYLA 259 (309)
T ss_dssp HHSSH-------HHHHH---HTCCSEEEEECG-GGCEEE-EET--------TEEEECCCCCCCCSCCTTHHHHHHHHHHH
T ss_pred HhCCH-------HHHHH---hcCCCEEEEEec-CCCeeE-ecC--------CcEEEeCCCCCCcCCCCCchHHHHHHHHH
Confidence 99852 33444 678999999998 689877 431 245667777776 6999999999999999
Q ss_pred hhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 242 WSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 242 ~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+|++ |+++++|+++|+++++..+++
T Consensus 260 ~l~~-g~~~~~a~~~a~~~aa~~v~~ 284 (309)
T 1v1a_A 260 GAVW-GLPVEERLRLANLLGASVAAS 284 (309)
T ss_dssp HHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 9998 999999999999999998875
No 37
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.90 E-value=7.3e-24 Score=187.24 Aligned_cols=211 Identities=16% Similarity=0.151 Sum_probs=152.3
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE---------eecCCCCCCc---ce--eecCHHHHHHHHHHHHhCCCcc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ---------FSNHTGYPTF---KG--QVLNGQQLCDLIEGLEANNLLY 86 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~---------~~~~~g~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
..|.+|.|. .++.|++.||+++.+.... ..+..|-..+ .+ ..+++++++. +.+.+
T Consensus 99 ~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~--~~~~~----- 171 (352)
T 4e3a_A 99 YFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEA--DVVAD----- 171 (352)
T ss_dssp EECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCH--HHHHT-----
T ss_pred EEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCH--HHHhh-----
Confidence 678888765 5667899999988775321 0011221111 01 2344444443 23443
Q ss_pred ccEE-EEcccC-ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccC--CCcEEcCCHHHHHH
Q 024300 87 YTHL-LTGYIG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQ 162 (269)
Q Consensus 87 ~~~i-~~G~l~-~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~--~~dii~pN~~E~~~ 162 (269)
++.+ +.|++. ++...+.+.++++.++++ ++++++||+.. +..+...+.+.+ +++ ++|+++||+.|++.
T Consensus 172 ~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~-----~~~~~~~~~l~~-ll~~~~~dil~~N~~Ea~~ 243 (352)
T 4e3a_A 172 AKVTYFEGYLWDPPRAKEAILDCARIAHQH--GREMSMTLSDS-----FCVDRYRGEFLD-LMRSGKVDIVFANRQEALS 243 (352)
T ss_dssp EEEEEEEGGGGSSSSHHHHHHHHHHHHHHT--TCEEEEECCCH-----HHHHHHHHHHHH-HHHTTSCCEEEEEHHHHHH
T ss_pred CCEEEEeeeecCCchHHHHHHHHHHHHHHc--CCEEEEECCch-----hhHHHHHHHHHH-HhcccCCcEEEeCHHHHHH
Confidence 3443 557664 334577888999999998 89999999532 112233445555 787 89999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC--CCCCCchHHHHHHHH
Q 024300 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP--AYFTGTGDLMTALLL 240 (269)
Q Consensus 163 l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dt~GaGDaf~a~~~ 240 (269)
|+|.+ +.+++++.|.+ +++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+
T Consensus 244 l~g~~-----~~~~a~~~l~~-~~~~vvvT~G-~~G~~~~~~---------~~~~~~~~~~v~~vvDttGAGDaF~agfl 307 (352)
T 4e3a_A 244 LYQTD-----DFEEALNRIAA-DCKIAAVTMS-ENGAVILKG---------RERYYVNAIRIREVVDTTGAGDLFASGFL 307 (352)
T ss_dssp HTTCS-----CHHHHHHHHHH-HSSEEEEECG-GGCEEEEET---------TEEEEECCCCCSCCSCCTTHHHHHHHHHH
T ss_pred HhCCC-----CHHHHHHHHhc-CCCEEEEEEC-CCceEEEEC---------CEEEEECCccCCCCcCCCChHHHHHHHHH
Confidence 99863 55667777765 6899999998 689988753 356778877765 699999999999999
Q ss_pred HhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 241 GWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 241 ~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
++|++ |+++++|+++|+++++.++++
T Consensus 308 ~~l~~-g~~l~~a~~~A~~aAa~~v~~ 333 (352)
T 4e3a_A 308 YGYTQ-GRSLEDCGKLGCLAAGIVIQQ 333 (352)
T ss_dssp HHHHT-TCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 99998 999999999999999998876
No 38
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.90 E-value=2.5e-23 Score=185.09 Aligned_cols=222 Identities=12% Similarity=0.095 Sum_probs=152.3
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE--------eecCCCCCCc---ce--eecCHHHHHH--HHHHHHhCCCc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ--------FSNHTGYPTF---KG--QVLNGQQLCD--LIEGLEANNLL 85 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~--------~~~~~g~~~~---~~--~~~~~~~~~~--~~~~~~~~~~~ 85 (269)
+.|.+|.|. .++.|++.||++.++.... +..+.+-..+ .+ ..++.++++. ..+.+.+..++
T Consensus 105 fiG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~~ 184 (372)
T 3uq6_A 105 YVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVY 184 (372)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEE
T ss_pred EEeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcCCCceEEEEeccchhhcchhhhhhhhHHHHhhcccEE
Confidence 467788776 5667899999988764221 0011121111 01 2355666643 33455654432
Q ss_pred cccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhC
Q 024300 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (269)
Q Consensus 86 ~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g 165 (269)
...|++. ....+.+.++++.++++ ++++++|++.. ++.+...+.+.+ +++++|+++||++|+..|++
T Consensus 185 ----~~~g~~~-~~~~~~~~~~~~~a~~~--g~~v~ldls~~-----~~~~~~~~~l~~-ll~~~Dil~~Ne~Ea~~l~~ 251 (372)
T 3uq6_A 185 ----YIAGFVI-NTCYEGMLKIAKHSLEN--EKLFCFNLSAP-----FLSQFNTKEVDE-MISYSNIVFGNESEAEAYGE 251 (372)
T ss_dssp ----EEEGGGH-HHHHHHHHHHHHHHHHT--TCEEEEECCCH-----HHHHHCHHHHHH-HHTTCSEEEEEHHHHHHHHH
T ss_pred ----EEecccc-cccHHHHHHHHHHHHHc--CCeEeeccccc-----hhhhhhHHHHHH-HhhcCCcccCCHHHHHHHhC
Confidence 2445543 34567788899999998 99999998532 111222344555 88999999999999999987
Q ss_pred CCCCCHHHHHHHHHHHHhc-------CCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEcccc---C-CCCCCchHH
Q 024300 166 FRIGSEADGREACKILHAA-------GPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI---P-AYFTGTGDL 234 (269)
Q Consensus 166 ~~~~~~~~~~~a~~~l~~~-------g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~dt~GaGDa 234 (269)
......++.+++++.+.+. +.+.|++|+| .+|++++.... .+...++.+.+ + +|||||||+
T Consensus 252 ~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G-~~G~~~~~~~~-------~~~~~~~v~~~~~~~vVDTtGAGDa 323 (372)
T 3uq6_A 252 VHGLLEDTVHATARYIADLPFADGKKRKRLVIITRG-KNPLLYTDSSD-------SEIHQFMVEQFKDDQIIDTNGAGDA 323 (372)
T ss_dssp HTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEET-TEEEEEEESSC-------SSCEEECCCCCCGGGCCCCTTHHHH
T ss_pred CCCCchhHHHHHHHHHhhhhhhhhcCCceEEEEcCC-CCceEEecCCC-------ceeeeeeccCCCCCceeCCCchHHH
Confidence 6544456777777777653 5678999998 78988876421 13334444332 3 699999999
Q ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhcC
Q 024300 235 MTALLLGWSNKYRDNLDIAAELAVSSLQVLLLLM 268 (269)
Q Consensus 235 f~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~~ 268 (269)
|+|+|+++|++ |+++++|+++|+.+++.++++.
T Consensus 324 F~agfl~~l~~-g~~l~~a~~~a~~aAa~vv~~~ 356 (372)
T 3uq6_A 324 FAAGFIADYIR-GKPMITSLHAAVKAAAYIICRS 356 (372)
T ss_dssp HHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHcCC
Confidence 99999999999 9999999999999999999873
No 39
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=1.5e-23 Score=182.54 Aligned_cols=210 Identities=16% Similarity=0.087 Sum_probs=144.4
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE--------eecCCCCCCcc----e--eecCHHHHHHHH--HHHHhCCC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ--------FSNHTGYPTFK----G--QVLNGQQLCDLI--EGLEANNL 84 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~--------~~~~~g~~~~~----~--~~~~~~~~~~~~--~~~~~~~~ 84 (269)
..|.+|.|. +++.|+++||+++++.... ..+..|-..+. + ..++.+.++... +.+..
T Consensus 58 ~i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 134 (317)
T 2nwh_A 58 IIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIA--- 134 (317)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHH---
T ss_pred EEEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhcc---
Confidence 567888765 5667899999988732111 00111211110 0 124555444333 44554
Q ss_pred ccccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhh
Q 024300 85 LYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (269)
Q Consensus 85 ~~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~ 164 (269)
++.+.++.. ...+.+.++++.++++ +++++|||+... ..+.++ .+++++|+++||++|++.|+
T Consensus 135 --~~~v~~~~~---~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~---------~~~~~~-~ll~~~dil~~N~~E~~~l~ 197 (317)
T 2nwh_A 135 --SDFLLCDAN---LPEDTLTALGLIARAC--EKPLAAIAISPA---------KAVKLK-AALGDIDILFMNEAEARALT 197 (317)
T ss_dssp --CSEEEEETT---SCHHHHHHHHHHHHHT--TCCEEEECCSHH---------HHGGGT-TTGGGCSEEEEEHHHHHHHH
T ss_pred --CCEEEEeCC---CCHHHHHHHHHHHHhc--CCeEEEeCCCHH---------HHHHHH-HHhhhCeEecCCHHHHHHHh
Confidence 444554321 1346777888999887 899999996421 011223 37899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhh
Q 024300 165 GFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWS 243 (269)
Q Consensus 165 g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l 243 (269)
|. +.++.+++++.|.+.|++.|++|.| .+|++++... +..++++.++++ +||+||||+|+|+|+++|
T Consensus 198 g~---~~~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~~--------~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l 265 (317)
T 2nwh_A 198 GE---TAENVRDWPNILRKAGLSGGVVTRG-ASEVVAFNGT--------EKAILHPPLIREVKDVTGAGDAMASGYLAAI 265 (317)
T ss_dssp C--------CTTHHHHHHHTTCCCEEEEET-TTEEEEECSS--------CEEEECCCCSSSCSCCCCSSHHHHHHHHHHH
T ss_pred CC---ChhHHHHHHHHHHHcCCCEEEEEEC-CCcEEEEcCC--------CceEEeCCCCccccCCCChhHHHHHHHHHHH
Confidence 86 2345567788888899999999998 6898776421 134567777766 699999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 244 NKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 244 ~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
++ |+++++|+++|++++...+++
T Consensus 266 ~~-g~~~~~a~~~A~~~aa~~v~~ 288 (317)
T 2nwh_A 266 AE-GKTIREALRQGAAAAAITVQS 288 (317)
T ss_dssp HT-TCCHHHHHHHHHHHHHHHHSS
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHcC
Confidence 98 999999999999999998876
No 40
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.90 E-value=4.4e-23 Score=180.74 Aligned_cols=214 Identities=12% Similarity=0.111 Sum_probs=153.8
Q ss_pred ccCcccccc---chHHHHhcC--CceeeeceEE-------eecCCCCC-C-c--ceeecCHHHHHHHHHHHHhCCCcccc
Q 024300 25 VQGYVGNKS---AVFPLQLLG--YDVDPIHSVQ-------FSNHTGYP-T-F--KGQVLNGQQLCDLIEGLEANNLLYYT 88 (269)
Q Consensus 25 ~~g~~G~~a---~~~~l~~~G--v~~~~i~~~~-------~~~~~g~~-~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (269)
..|.+|.+. +++.|+++| |+++.+.... +.+..|-. . + .+..+++++++.+++.+.+. +-.++
T Consensus 70 ~~~~vG~d~G~~i~~~L~~~g~~V~~~~v~~~~~t~~~~~~v~~~g~~~~~~~~~g~~l~~~~~~~~~~~~~~~-~~~~~ 148 (331)
T 2ajr_A 70 ATGFVGGYMGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAINFPGPDVTDMDVNHFLRRYKMT-LSKVD 148 (331)
T ss_dssp EEEEEEHHHHHHHHHHHHHHCTTEEEEEEEESSCCEEEEEEEETTTTEEEEEECCCCCCCHHHHHHHHHHHHHH-HTTCS
T ss_pred EEEEecCchHHHHHHHHHHcCCccceEEEEcCCCCeEEEEEEeCCCceEEEEeCCCCCCCHHHHHHHHHHHHHh-cccCC
Confidence 456666543 566788999 9988774311 11122321 1 1 12346777776654333210 00245
Q ss_pred EEEE-cccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhcc---CCCcEEcCCHHH-HHHh
Q 024300 89 HLLT-GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV---PVASMLTPNQFE-AEQL 163 (269)
Q Consensus 89 ~i~~-G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll---~~~dii~pN~~E-~~~l 163 (269)
++.+ |+++.....+.+.++++.++++ +++++|||+.. . +++ ++ +++|+++||++| ++.|
T Consensus 149 ~v~~~g~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~---------~----~~~-~l~~~~~~dil~~N~~E~~~~l 212 (331)
T 2ajr_A 149 CVVISGSIPPGVNEGICNELVRLARER--GVFVFVEQTPR---------L----LER-IYEGPEFPNVVKPDLRGNHASF 212 (331)
T ss_dssp EEEEESCCCTTSCTTHHHHHHHHHHHT--TCEEEEECCHH---------H----HHH-HHHSSCCCSEECCCCTTCCSCB
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHc--CCEEEEECChH---------H----HHH-HHhcCCCCeEEEeCccchHHHH
Confidence 5444 6776544457778889999988 89999999642 1 222 33 359999999999 9999
Q ss_pred hCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEE-ccccC-CCCCCchHHHHHHHHH
Q 024300 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIV-IPKIP-AYFTGTGDLMTALLLG 241 (269)
Q Consensus 164 ~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~dt~GaGDaf~a~~~~ 241 (269)
+|....+.++..++++.|.+. ++.|++|.| .+|++++.. ++.++++ .++++ +||+||||+|+|+|++
T Consensus 213 ~g~~~~~~~~~~~~~~~l~~~-~~~vvvT~G-~~Ga~~~~~---------~~~~~~~~~~~v~vvDttGAGDaF~ag~l~ 281 (331)
T 2ajr_A 213 LGVDLKTFDDYVKLAEKLAEK-SQVSVVSYE-VKNDIVATR---------EGVWLIRSKEEIDTSHLLGAGDAYVAGMVY 281 (331)
T ss_dssp TTBCCCSHHHHHHHHHHHHHH-SSEEEEEET-TTEEEEECS---------SCEEEEEESSCCCGGGCTTHHHHHHHHHHH
T ss_pred hCCCCCCHHHHHHHHHHHHHh-cCEEEEeec-CCceEEEeC---------CcEEEEecCCcccccCCCchHHHHHHHHHH
Confidence 998766677888889999888 999999998 689887643 2466777 77776 6999999999999999
Q ss_pred hhc-cCCCCHHHHHHHHHHHHHHHhhc
Q 024300 242 WSN-KYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 242 ~l~-~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+|+ + |+++++|+++|++++...+++
T Consensus 282 ~l~~~-g~~~~~al~~A~a~aa~~v~~ 307 (331)
T 2ajr_A 282 YFIKH-GANFLEMAKFGFASALAATRR 307 (331)
T ss_dssp HHHHH-CSCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 999 9 999999999999999988875
No 41
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.90 E-value=3.4e-23 Score=180.93 Aligned_cols=210 Identities=19% Similarity=0.180 Sum_probs=146.4
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCCCC----------CCcc---e---eecCHHHHHHHHHHHHhCCC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGY----------PTFK---G---QVLNGQQLCDLIEGLEANNL 84 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~g~----------~~~~---~---~~~~~~~~~~~~~~~~~~~~ 84 (269)
..|.+|.|. +++.|+++||+++.+.... ..+|+. ..+. + ..++.++++ .+.+.+
T Consensus 62 ~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~-~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~--- 135 (325)
T 3h49_A 62 LMSRIGKDAAGQFILDHCRKENIDIQSLKQDV-SIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVD--FARFSQ--- 135 (325)
T ss_dssp EECEEESSHHHHHHHHHHHHHTCBCSSCEEET-TSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCC--GGGGGG---
T ss_pred EEEEECCChHHHHHHHHHHHcCCceeeEEecC-CCCCceEEEEECCCCceeEEeccCcccccCChhhcC--hhhhcc---
Confidence 578888764 5678999999998775432 012221 1110 0 011222221 112333
Q ss_pred ccccEEE-EcccCCh-hhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHH
Q 024300 85 LYYTHLL-TGYIGSV-SFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQ 162 (269)
Q Consensus 85 ~~~~~i~-~G~l~~~-~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~ 162 (269)
.+.+. .|++... ...+.+.++++.++++ + .+++|++++.. .| +..+.+.+ +++++|+++||+.|++.
T Consensus 136 --~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~--~-~~~~d~~~~~~--~~---~~~~~~~~-~l~~~dil~~N~~E~~~ 204 (325)
T 3h49_A 136 --AKLLSLASIFNSPLLDGKALTEIFTQAKAR--Q-MIICADMIKPR--LN---ETLDDICE-ALSYVDYLFPNFAEAKL 204 (325)
T ss_dssp --CSEEEEEEETTSTTSCHHHHHHHHHHHHHT--T-CEEEEEECCCS--SC---CCHHHHHH-HHTTCSEEECBHHHHHH
T ss_pred --CCEEEEecccCCcccCHHHHHHHHHHHHhc--C-CEEEecCCchh--hh---hHHHHHHH-HHhhCCEEecCHHHHHH
Confidence 34433 3433221 2346778889999887 6 68888877642 22 12334555 88999999999999999
Q ss_pred hhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEcccc-C-CCCCCchHHHHHHHH
Q 024300 163 LTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI-P-AYFTGTGDLMTALLL 240 (269)
Q Consensus 163 l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~dt~GaGDaf~a~~~ 240 (269)
|+|.+ +.+++++.|.+.|++.|++|.| .+|++++.. ++.++++++++ + +||+||||+|+|+|+
T Consensus 205 l~g~~-----~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~~~~vvDttGAGDaf~ag~~ 269 (325)
T 3h49_A 205 LTGKE-----TLDEIADCFLACGVKTVVIKTG-KDGCFIKRG---------DMTMKVPAVAGITAIDTIGAGDNFASGFI 269 (325)
T ss_dssp HHTCS-----SHHHHHHHHHTTTCSEEEEECT-TSCEEEEET---------TEEEEECCCSSCCCSCCTTHHHHHHHHHH
T ss_pred HhCCC-----CHHHHHHHHHHcCCCEEEEEeC-CCCeEEEEC---------CeEEEecCcCCCCCcCCCChhHHHHHHHH
Confidence 99973 5567788888899999999998 789988753 25566776654 4 699999999999999
Q ss_pred HhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 241 GWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 241 ~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
++|++ |+++++|+++|++++..++++
T Consensus 270 ~~l~~-g~~~~~a~~~A~~~aa~~v~~ 295 (325)
T 3h49_A 270 AALLE-GKNLRECARFANATAAISVLS 295 (325)
T ss_dssp HHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHcc
Confidence 99998 999999999999999998875
No 42
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.90 E-value=1.3e-24 Score=190.07 Aligned_cols=214 Identities=16% Similarity=0.116 Sum_probs=144.7
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCC---------CCCCcc---e--eecCHHHHHHHHHHHHhCCCcc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHT---------GYPTFK---G--QVLNGQQLCDLIEGLEANNLLY 86 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~---------g~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
..|.+|.|. +++.|+++||+++.+.... ...| |-..+. + ..++.+++. .+.+.+
T Consensus 73 ~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~-~~~t~~~~v~~~~g~~~~~~~~~a~~~~~~~~~~--~~~~~~----- 144 (327)
T 3hj6_A 73 LISRLGADAFGNYLLDVLKGEQIITDGIQQDK-ERRTTIVYVSKSTRTPDWLPYREADMYLQEDDII--FELIKR----- 144 (327)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCBCTTCEEES-SSCCCEEEECCCTTCCCEEEECSGGGGCCSCCCH--HHHHC------
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcccEEEcC-CCCceEEEEEecCCCccEEEecChhhhCChhhcC--HhHhcc-----
Confidence 567777764 5667899999988775321 0112 211110 0 112222221 123443
Q ss_pred ccEEEEcc--cCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccC-ChhhHHHHHHhccCCCcEEcCCHHHHHHh
Q 024300 87 YTHLLTGY--IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV-PSELVSVYREKVVPVASMLTPNQFEAEQL 163 (269)
Q Consensus 87 ~~~i~~G~--l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~-~~~~~~~~~~~ll~~~dii~pN~~E~~~l 163 (269)
++.+.++. +..+...+.+.++++.++++ +++++|||+++.. .|. .++..+.+.+ +++++|+++||++|++.|
T Consensus 145 ~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~~~~~~~~~~~-~l~~~dil~~N~~E~~~l 219 (327)
T 3hj6_A 145 SKVFHLSTFILSRKPARDTAIKAFNYAREQ--GKIVCFDPCYRKV--LWPEGDDGAGVVEE-IISRADFVKPSLDDARHL 219 (327)
T ss_dssp -CEEEEESHHHHSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GSCSSSCSHHHHHH-HHTTCSEECCBHHHHHHH
T ss_pred CCEEEECchHhcCchhHHHHHHHHHHHHHC--CCEEEEECCCchh--hcCCHHHHHHHHHH-HHhhCCEEecCHHHHHHH
Confidence 34444432 23344567888999999988 9999999987642 332 2344555555 899999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHh
Q 024300 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGW 242 (269)
Q Consensus 164 ~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~ 242 (269)
+|.. +.+++++.|++.|++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+++
T Consensus 220 ~g~~-----~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaf~ag~~~~ 284 (327)
T 3hj6_A 220 FGPD-----SPENYVKRYLELGVKAVILTLG-EEGVIASDG---------EEIIRIPAFSEDAVDVTGAGDAFWSGFICG 284 (327)
T ss_dssp HTTS-----CSSGGGGGGTTTTCSEEEEECS-TTCEEEECS---------SCEEESCSSTTC-----CCHHHHHHHHHHT
T ss_pred hCCC-----CHHHHHHHHHhCCCCEEEEEEC-CCceEEEeC---------CeeEEcCCcccccCCCcChhHHHHHHHHHH
Confidence 9862 3345567777889999999998 789988753 356677777777 69999999999999999
Q ss_pred hccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 243 SNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 243 l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|++ |+++++|+++|+++++..+++
T Consensus 285 l~~-g~~~~~a~~~A~a~aa~~v~~ 308 (327)
T 3hj6_A 285 LLD-GYTVKRSIKLGNGVAAFKIRG 308 (327)
T ss_dssp TSS-CSTTHHHHHHHHCCCSSCC--
T ss_pred HHc-CCCHHHHHHHHHHHHHHHhcC
Confidence 998 999999999999988766553
No 43
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.90 E-value=4.9e-23 Score=177.46 Aligned_cols=161 Identities=20% Similarity=0.183 Sum_probs=128.6
Q ss_pred ccEEEEcccC--ChhhHHHHHHHHHHHHh-cCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHh
Q 024300 87 YTHLLTGYIG--SVSFLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQL 163 (269)
Q Consensus 87 ~~~i~~G~l~--~~~~~~~i~~~l~~~k~-~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l 163 (269)
++++.+|.++ .+...+.+.++++.+++ + ++++++||+++.. .| .. +.+++ +++++|+++||++|++.|
T Consensus 115 ~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~--~~~v~~D~~~~~~--~~-~~---~~~~~-~l~~~dil~~N~~E~~~l 185 (296)
T 2qhp_A 115 TRAVCFGSLAQRNEVSRATINRFLDTMPDID--GQLKIFDINLRQD--FY-TK---EVLRE-SFKRCNILKINDEELVTI 185 (296)
T ss_dssp EEEEEECSGGGSSHHHHHHHHHHHHHSCCTT--SCEEEEECCCCTT--CC-CH---HHHHH-HHHHCSEEEEEHHHHHHH
T ss_pred CCEEEECChHhcChHHHHHHHHHHHHHHhcC--CCEEEEECcCCcc--cc-CH---HHHHH-HHHHCCEEECCHHHHHHH
Confidence 5667778754 34456778888888876 5 7899999988743 22 22 23444 788999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHhc-CCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHH
Q 024300 164 TGFRIGSEADGREACKILHAA-GPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLG 241 (269)
Q Consensus 164 ~g~~~~~~~~~~~a~~~l~~~-g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~ 241 (269)
+|....+.++.+++++.|.+. |++.|++|.| .+|++++.. ++.++++.++++ +||+||||+|+|+|++
T Consensus 186 ~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~~vdttGAGD~f~a~~~~ 255 (296)
T 2qhp_A 186 SRMFGYPGIDLQDKCWILLAKYNLKMLILTCG-INGSYVFTP---------GVVSFQETPKVPVADTVGAGDSFTAAFCA 255 (296)
T ss_dssp HHHTTCTTSCHHHHHHHHHHHTTCSEEEEECG-GGCEEEEET---------TEEEEECCCCCCCSCCTTHHHHHHHHHHH
T ss_pred hcccCCCCCCHHHHHHHHHHhcCCCEEEEeec-CCCeEEEEC---------CeEEEeCCCCCccccCCCchHHHHHHHHH
Confidence 986443445677788888875 9999999998 689887753 256677777777 6999999999999999
Q ss_pred hhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 242 WSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 242 ~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+|++ |+++++|+++|++++...+++
T Consensus 256 ~l~~-g~~~~~a~~~a~~~aa~~v~~ 280 (296)
T 2qhp_A 256 SILN-GKSVPEAHKLAVEVSAYVCTQ 280 (296)
T ss_dssp HHHH-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 9999 999999999999999998875
No 44
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.89 E-value=3e-23 Score=180.26 Aligned_cols=211 Identities=13% Similarity=0.136 Sum_probs=146.8
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE--------ee---cCCCCCCc--c-----eeecCHHHHHHHHHHHHhC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ--------FS---NHTGYPTF--K-----GQVLNGQQLCDLIEGLEAN 82 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~--------~~---~~~g~~~~--~-----~~~~~~~~~~~~~~~~~~~ 82 (269)
..|.+|.|. +++.|++.||+++++.... +. +..|-..+ . ...++.++++. +.+.+
T Consensus 52 ~i~~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~--~~~~~- 128 (313)
T 2v78_A 52 LIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINE--NYVRN- 128 (313)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCH--HHHHT-
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCH--HHhcC-
Confidence 567777764 5667899999988765321 01 11121111 0 11344444432 23444
Q ss_pred CCccccEEEE-cccC--ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCC-hhhHHHHHHhccCCCc--EEcCC
Q 024300 83 NLLYYTHLLT-GYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVAS--MLTPN 156 (269)
Q Consensus 83 ~~~~~~~i~~-G~l~--~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~-~~~~~~~~~~ll~~~d--ii~pN 156 (269)
++.+.+ |+.+ ++...+.+.++++.+++ . ++||+++.. +|.. +...+.+++ +++++| +++||
T Consensus 129 ----~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~-----~-~~D~~~~~~--~~~~~~~~~~~~~~-~l~~~d~~il~~N 195 (313)
T 2v78_A 129 ----SRLVHSTGITLAISDNAKEAVIKAFELAKS-----R-SLDTNIRPK--LWSSLEKAKETILS-ILKKYDIEVLITD 195 (313)
T ss_dssp ----SSEEEEEHHHHHHCHHHHHHHHHHHHHCSS-----E-EEECCCCGG--GSSCHHHHHHHHHH-HHHHSCEEEEEEC
T ss_pred ----CCEEEEcCchhhcChHHHHHHHHHHHHHHH-----h-CcCCcCChh--hcCCHHHHHHHHHH-HHHhcCeeEEECc
Confidence 344443 4433 23445667777776643 2 899988632 3322 233445555 889999 99999
Q ss_pred HHHHHHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHH
Q 024300 157 QFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLM 235 (269)
Q Consensus 157 ~~E~~~l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf 235 (269)
++|++.|+|. ++.+++++.|.+.|++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|
T Consensus 196 ~~E~~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~vvDttGAGDaF 260 (313)
T 2v78_A 196 PDDTKILLDV-----TDPDEAYRKYKELGVKVLLYKLG-SKGAIAYKD---------NVKAFKDAYKVPVEDPTGAGDAM 260 (313)
T ss_dssp HHHHHHHHSC-----CCHHHHHHHHHHTTEEEEEEECG-GGCEEEEET---------TEEEEECCCCCCCSCCTTHHHHH
T ss_pred HHHHHHHhCC-----CCHHHHHHHHHhCCCCEEEEEEC-CCCcEEeeC---------CcEEEeCCCcCCccCCCCchHHH
Confidence 9999999986 35667888888889999999998 689887743 256677777777 6999999999
Q ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 236 TALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 236 ~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+|+|+++|++ |+++++|+++|+++++..+++
T Consensus 261 ~ag~~~~l~~-g~~~~~a~~~a~~~aa~~v~~ 291 (313)
T 2v78_A 261 AGTFVSLYLQ-GKDIEYSLAHGIAASTLVITV 291 (313)
T ss_dssp HHHHHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcc
Confidence 9999999998 999999999999999998876
No 45
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.89 E-value=4.8e-23 Score=178.77 Aligned_cols=210 Identities=16% Similarity=0.170 Sum_probs=146.9
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE-------e--ecCCCC--CCc--c-----eeecCHHHHHHHHHHHHhC
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ-------F--SNHTGY--PTF--K-----GQVLNGQQLCDLIEGLEAN 82 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~-------~--~~~~g~--~~~--~-----~~~~~~~~~~~~~~~~~~~ 82 (269)
..|.+|.|. +++.|+++||+++++.... . .+..|- ..+ . ...++.++++. +.+.+
T Consensus 52 ~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~- 128 (311)
T 2dcn_A 52 IIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE--EYVKS- 128 (311)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH--HHHTT-
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcCh--HHHcC-
Confidence 577888764 5667899999988765321 0 011121 111 0 11234444332 23443
Q ss_pred CCccccEEEE-cccC--ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccC--CCcEEcCCH
Q 024300 83 NLLYYTHLLT-GYIG--SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQ 157 (269)
Q Consensus 83 ~~~~~~~i~~-G~l~--~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~--~~dii~pN~ 157 (269)
++.+.+ |+.+ ++...+.+.++++.+++ . +|||+++.. .|..++..+.+++ +++ ++|+++||+
T Consensus 129 ----~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~-----~-~~D~~~~~~--~~~~~~~~~~~~~-~l~~~~~dil~~N~ 195 (311)
T 2dcn_A 129 ----ADLVHSSGITLAISSTAKEAVYKAFEIASN-----R-SFDTNIRLK--LWSAEEAKREILK-LLSKFHLKFLITDT 195 (311)
T ss_dssp ----CSEEEEEHHHHHSCHHHHHHHHHHHHHCSS-----E-EEECCCCTT--TSCHHHHHHHHHH-HHHHCCEEEEEEEH
T ss_pred ----CCEEEEeCcccccChHHHHHHHHHHHHHHH-----h-CcCccCchh--hCChHHHHHHHHH-HHhhcCCcEEECCH
Confidence 454444 4433 34456777777777653 2 899988643 3332333445555 889 999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHH
Q 024300 158 FEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMT 236 (269)
Q Consensus 158 ~E~~~l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~ 236 (269)
+|++.|+|. ++.+++++.|.+. ++.|++|.| .+|++++.. ++.++++.++++ +||+||||+|+
T Consensus 196 ~E~~~l~g~-----~~~~~~~~~l~~~-~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~vvdttGAGDaf~ 259 (311)
T 2dcn_A 196 DDSKIILGE-----SDPDKAAKAFSDY-AEIIVMKLG-PKGAIVYYD---------GKKYYSSGYQVPVEDVTGAGDALG 259 (311)
T ss_dssp HHHHHHHSC-----CCHHHHHHHHTTT-EEEEEEEEE-TTEEEEEET---------TEEEEEECCCCCCSCCTTHHHHHH
T ss_pred HHHHHHhCC-----CCHHHHHHHHHHh-CCEEEEEEC-CCCcEEEeC---------CcEEEeCCccccccCCCCchHHHH
Confidence 999999986 3566778888887 889999998 689887753 256678887777 69999999999
Q ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 237 ALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 237 a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+|+++|++ |+++++|+++|+++++..+++
T Consensus 260 a~~~~~l~~-g~~~~~a~~~a~~~aa~~v~~ 289 (311)
T 2dcn_A 260 GTFLSLYYK-GFEMEKALDYAIVASTLNVMI 289 (311)
T ss_dssp HHHHHHHTT-TCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHc-CCCHHHHHHHHHHHHHHHhcc
Confidence 999999998 999999999999999998875
No 46
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.88 E-value=2.6e-22 Score=174.34 Aligned_cols=132 Identities=18% Similarity=0.177 Sum_probs=108.9
Q ss_pred HHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHhcCCCeEE
Q 024300 111 LRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVV 190 (269)
Q Consensus 111 ~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~~~~~~~~~a~~~l~~~g~~~Vv 190 (269)
++++ ++++++||+++.. .. . .+++++|+++||++|++.|+|.+..+.++..++++.|.++|++.|+
T Consensus 159 a~~~--~~~v~~Dp~~~~~----~~-------~-~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vv 224 (311)
T 1vm7_A 159 AKRF--NGIVIFDPAPAQG----IN-------E-EIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVI 224 (311)
T ss_dssp HHHC--CSEEEECCCSCTT----CC-------G-GGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEE
T ss_pred HHHc--CCEEEEeCcchhh----hh-------H-HHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEE
Confidence 6666 8999999987521 11 1 3789999999999999999986433345677888899999999999
Q ss_pred EEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 191 ITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 191 vt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+|+| .+|++++.. ++.++++.++++ +||+||||+|+|+|+++|++ |+++++|+++|+++++..+++
T Consensus 225 vT~G-~~G~~~~~~---------~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~~ 291 (311)
T 1vm7_A 225 VKLG-DKGVLLVNK---------NEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSE-GKNPEEAVIFGTAAAAISVTR 291 (311)
T ss_dssp EECG-GGCEEEEET---------TEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHTTS
T ss_pred EEEC-CCCeEEEeC---------CceEEecCCCcccCCCCccHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHhCc
Confidence 9998 689887643 245667777776 69999999999999999998 999999999999999998875
No 47
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.88 E-value=8e-23 Score=182.53 Aligned_cols=219 Identities=13% Similarity=0.056 Sum_probs=148.1
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCCCCC---------Cc---ce--eecCHHHHHHHHHHHHhCCCcc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYP---------TF---KG--QVLNGQQLCDLIEGLEANNLLY 86 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~g~~---------~~---~~--~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
..|.+|.|. +++.|+++||++.++.... ..|+.. .+ .+ ..++.+ +...+.+.+
T Consensus 110 ~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~--~~T~~~~~~~~~g~r~~~~~~~a~~~l~~~--~~~~~~l~~----- 180 (383)
T 2abs_A 110 YMGAIGDDPRGQVLKELCDKEGLATRFMVAPG--QSTGVCAVLINEKERTLCTHLGACGSFRLP--EDWTTFASG----- 180 (383)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEECTT--CCCEEEEEEEETTEEEEEEECGGGGGCCCC--TTHHHHTTT-----
T ss_pred EEEEecCChhHHHHHHHHHHcCCceeeeecCC--CCCeEEEEEEcCCceeEeeccChhhhCChh--hhhHHHhhc-----
Confidence 456677664 5667899999998874211 122211 01 00 012222 112223443
Q ss_pred ccEEEE-cccCChhhHHHHHHHHHHHHh-cCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhh
Q 024300 87 YTHLLT-GYIGSVSFLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (269)
Q Consensus 87 ~~~i~~-G~l~~~~~~~~i~~~l~~~k~-~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~ 164 (269)
++++.+ |+.+. ...+.+.++++.+++ + ++++++||... . +.++..+.+++ +++++|+++||+.|++.|+
T Consensus 181 ~~~v~~~g~~~~-~~~~~~~~~~~~a~~~~--g~~v~~d~~~~----~-~~~~~~~~l~~-ll~~~dil~pN~~Ea~~L~ 251 (383)
T 2abs_A 181 ALIFYATAYTLT-ATPKNALEVAGYAHGIP--NAIFTLNLSAP----F-CVELYKDAMQS-LLLHTNILFGNEEEFAHLA 251 (383)
T ss_dssp CCEEEEEGGGGT-TCHHHHHHHHHHHHTST--TCEEEEECCCH----H-HHHHCHHHHHH-HHHTCSEEEEEHHHHHHHH
T ss_pred CCEEEEeeeccc-CCHHHHHHHHHHHHHhc--CCEEEEeCCcH----H-HHHHHHHHHHH-HHhhCCEEeCCHHHHHHHh
Confidence 455544 55432 345778889999988 7 88999998422 1 12333445555 8899999999999999998
Q ss_pred CCC-CCC-----------HHHHHHHHHHHHh------c-CCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEcccc-
Q 024300 165 GFR-IGS-----------EADGREACKILHA------A-GPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI- 224 (269)
Q Consensus 165 g~~-~~~-----------~~~~~~a~~~l~~------~-g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~- 224 (269)
+.. ..+ .++++++++.|.+ . |++.|+||+| .+|++++...... . ++.++++.+++
T Consensus 252 g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G-~~Ga~~~~~~~~~-~---~~~~~~~~~~v~ 326 (383)
T 2abs_A 252 KVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRG-HNPVIAAEQTADG-T---VVVHEVGVPVVA 326 (383)
T ss_dssp HHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECT-TSCEEEEEECTTS-C---EEEEEECCCCCC
T ss_pred cccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcC-CCCeEEEEeecCC-C---CeEEEecCccCC
Confidence 753 221 4677888888887 3 8999999998 6898877310000 0 24566777665
Q ss_pred --C-CCCCCchHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 225 --P-AYFTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 225 --~-~dt~GaGDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+ +||+||||+|+|+|+++|++ |+++++|+++|++++..++++
T Consensus 327 ~~~vvDttGAGDaF~ag~~~~l~~-g~~l~~al~~A~a~aa~~v~~ 371 (383)
T 2abs_A 327 AEKIVDTNGAGDAFVGGFLYALSQ-GKTVKQCIMCGNACAQDVIQH 371 (383)
T ss_dssp GGGCCCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred cCCcCcCCChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHhc
Confidence 4 69999999999999999998 999999999999999998875
No 48
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=1.4e-22 Score=178.37 Aligned_cols=203 Identities=15% Similarity=0.139 Sum_probs=143.8
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE---------eecCCCCCCc---cee--ecCHHHHHHHHHHHHhCCCcc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ---------FSNHTGYPTF---KGQ--VLNGQQLCDLIEGLEANNLLY 86 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~---------~~~~~g~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~ 86 (269)
..|.+|.|. +++.|+++||++..+.... ..+..|-..+ .+. .++++++. .+.+.+
T Consensus 85 ~i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~--~~~l~~----- 157 (343)
T 2rbc_A 85 LWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACT--PEDIAL----- 157 (343)
T ss_dssp EECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCC--HHHHTT-----
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhc--HhhhCC-----
Confidence 577888765 5667899999888764321 0011221111 011 12222221 123333
Q ss_pred ccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCC
Q 024300 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (269)
Q Consensus 87 ~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~ 166 (269)
++++.++... .+.+.++++.++++ +++++|||... . + .+++.+++++|+++||++|++.|+|.
T Consensus 158 ~~~v~~~~~~----~~~~~~~~~~a~~~--g~~v~~Dp~~~-------~-~---~~~~~ll~~~dil~~N~~Ea~~l~g~ 220 (343)
T 2rbc_A 158 FDAVLVDVRW----PELALDVLTVARAL--GKPAILDGDVA-------P-V---ETLEGLAPAATHIVFSEPAATRLTGL 220 (343)
T ss_dssp CSEEEECSSS----HHHHHHHHHHHHHT--TCCEEEEECSC-------C-H---HHHHHHGGGCSEEEEEHHHHHHHHCC
T ss_pred CCEEEEcCCC----HHHHHHHHHHHHHC--CCEEEEECCcc-------c-c---ccHHHHHhcCCEEEeCHHHHHHHcCC
Confidence 4556555321 24577788888887 89999999532 1 1 22222788999999999999999986
Q ss_pred CCCCHHHHHHHHHHHHhcCC-CeEEEEeeecCCcEEEEeeeccCCCCCC--ceEEEEccccC-CCCCCchHHHHHHHHHh
Q 024300 167 RIGSEADGREACKILHAAGP-AKVVITSINIDGNLFLIGSHQKEKGQSP--EQFKIVIPKIP-AYFTGTGDLMTALLLGW 242 (269)
Q Consensus 167 ~~~~~~~~~~a~~~l~~~g~-~~Vvvt~g~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~dt~GaGDaf~a~~~~~ 242 (269)
+ +.+++++.|.+.|+ +.|++|.| .+|++++.. + +.+++++++++ +||+||||+|+|+|+++
T Consensus 221 ~-----~~~~~~~~l~~~g~~~~VvvT~G-~~G~~~~~~---------~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~ 285 (343)
T 2rbc_A 221 E-----TVKDMLPVLHARYPQTFIAVTAG-PAGCWWTEA---------DDPTVHFQTTMQVEAVDTLAAGDIFHGTFALA 285 (343)
T ss_dssp S-----SHHHHHHHHHHHSTTSEEEEECG-GGCEEEECT---------TCCCEEEECCCCCCCSCCTTHHHHHHHHHHHH
T ss_pred C-----CHHHHHHHHHHhCCCceEEEEEC-CcceEEEeC---------CCceeEEecCCCCccccCCChHHHHHHHHHHH
Confidence 3 56778888988999 99999998 689887642 2 46677777776 69999999999999999
Q ss_pred hccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 243 SNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 243 l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|++ |+++++|+++|++++...+++
T Consensus 286 l~~-g~~~~~a~~~A~~~aa~~v~~ 309 (343)
T 2rbc_A 286 MAE-GMQSRAAVRLSSVAAALKCTV 309 (343)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHc-CCCHHHHHHHHHHHHHHHhCC
Confidence 998 999999999999999998875
No 49
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.87 E-value=2e-22 Score=177.07 Aligned_cols=160 Identities=18% Similarity=0.183 Sum_probs=127.8
Q ss_pred ccEEEE-cc-cCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCC-hhhHHHHHHhccCCCcEEcCCHHHHHHh
Q 024300 87 YTHLLT-GY-IGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVP-SELVSVYREKVVPVASMLTPNQFEAEQL 163 (269)
Q Consensus 87 ~~~i~~-G~-l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~-~~~~~~~~~~ll~~~dii~pN~~E~~~l 163 (269)
++++.+ |+ +.++...+.+.++++.++++ +++++|||+++.. +|.. ++..+.+++ +++++|+++||++|++.|
T Consensus 142 ~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~--~~~~~~~~~~~~~~-ll~~~dil~~N~~Ea~~l 216 (339)
T 1tyy_A 142 YEWFYFSSIGLTDRPAREACLEGARRMREA--GGYVLFDVNLRSK--MWGNTDEIPELIAR-SAALASICKVSADELCQL 216 (339)
T ss_dssp TCEEEEEHHHHSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGG--GCSCGGGHHHHHHH-HHHHCSEEEEEHHHHHHH
T ss_pred CCEEEEcchhhcCcccHHHHHHHHHHHHHc--CCEEEEeCCCCcc--ccCCHHHHHHHHHH-HHhhCCEEecCHHHHHHH
Confidence 566655 33 34555667888999999988 8999999998742 3322 344555655 889999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHh
Q 024300 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGW 242 (269)
Q Consensus 164 ~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~ 242 (269)
+|.+ +.+++++.|.+.|++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+++
T Consensus 217 ~g~~-----~~~~~~~~l~~~g~~~VvvT~G-~~G~~~~~~---------~~~~~~~~~~v~vvDttGAGDaF~ag~~~~ 281 (339)
T 1tyy_A 217 SGAS-----HWQDARYYLRDLGCDTTIISLG-ADGALLITA---------EGEFHFPAPRVDVVDTTGAGDAFVGGLLFT 281 (339)
T ss_dssp HCCS-----SGGGGSSTTGGGTCSCEEEECG-GGCEEEESS---------SCEEEECCCCCCCSCCTTHHHHHHHHHHHH
T ss_pred hCCC-----CHHHHHHHHHHcCCCEEEEEEC-CCceEEEeC---------CceEEcCCCCCCcCCCCCchHHHHHHHHHH
Confidence 9863 3455667777889999999998 689887643 256677777776 69999999999999999
Q ss_pred hccCC-----CCHHHHHHHHHHHHHHHhhc
Q 024300 243 SNKYR-----DNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 243 l~~~g-----~~~~~a~~~A~~~~~~~l~~ 267 (269)
|++ | .++++|+++|++++..++++
T Consensus 282 l~~-g~~~~~~~l~~a~~~A~a~aa~~v~~ 310 (339)
T 1tyy_A 282 LSR-ANCWDHALLAEAISNANACGAMAVTA 310 (339)
T ss_dssp HTT-SSSCCHHHHHHHHHHHHHHHHHGGGS
T ss_pred HHh-ccccccccHHHHHHHHHHHHHHHhCC
Confidence 998 8 89999999999999998875
No 50
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.87 E-value=3e-22 Score=174.05 Aligned_cols=151 Identities=17% Similarity=0.222 Sum_probs=119.5
Q ss_pred ccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCC
Q 024300 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (269)
Q Consensus 87 ~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~ 166 (269)
++++.+|.+++ +...++++.+ ++ +.++++||... | .+...+.+++ +++++|+++||++|++.|+|.
T Consensus 120 ~~~v~~~~~~~----~~~~~~~~~~-~~--~~~v~~Dp~~~-----~-~~~~~~~~~~-~l~~~dil~~N~~E~~~l~g~ 185 (313)
T 3kd6_A 120 SKFVCLGNIDP----ELQLKVLDQI-DD--PKLVVCDTMNF-----W-IEGKPEELKK-VLARVDVFIVNDSEARLLSGD 185 (313)
T ss_dssp CSEEEECSSCH----HHHHHHHTTC-SS--CSEEEEECCHH-----H-HHHCHHHHHH-HHTTCSEEEEEHHHHHHHHSC
T ss_pred CCEEEEcCCCH----HHHHHHHHHH-hh--CCEEEEcChhh-----h-hhhhHHHHHH-HHhcCCEEEeCHHHHHHHhCC
Confidence 67788888753 2334455555 34 78999998321 1 1223445555 889999999999999999996
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEcccc-C-CCCCCchHHHHHHHHHhhc
Q 024300 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKI-P-AYFTGTGDLMTALLLGWSN 244 (269)
Q Consensus 167 ~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~dt~GaGDaf~a~~~~~l~ 244 (269)
++.+++++.|.++|++.|++|.| .+|++++.. ++.++++++++ + +||+||||+|+|+|+++|+
T Consensus 186 -----~~~~~~~~~l~~~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~ 250 (313)
T 3kd6_A 186 -----PNLVKTARIIREMGPKTLIIKKG-EHGALLFTD---------NGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLA 250 (313)
T ss_dssp -----SCHHHHHHHHHTTSCSEEEEECT-TSCEEEEET---------TEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHcCCCEEEEeeC-CCcEEEEEC---------CceEEeCCCCCCCcCCCCCccHHHHHHHHHHHH
Confidence 36778889999999999999998 689988753 35667777776 4 6999999999999999999
Q ss_pred cCCC-----CHHHHHHHHHHHHHHHhhc
Q 024300 245 KYRD-----NLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 245 ~~g~-----~~~~a~~~A~~~~~~~l~~ 267 (269)
+ |. ++++|+++|+++++.++++
T Consensus 251 ~-g~~~~~~~l~~a~~~a~~~aa~~v~~ 277 (313)
T 3kd6_A 251 R-CGNTSEAEMRKAVLYGSAMASFCVEQ 277 (313)
T ss_dssp H-HCCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred c-CCCccccCHHHHHHHHHHHHHHHHee
Confidence 8 88 8999999999999998875
No 51
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.87 E-value=9.5e-23 Score=179.87 Aligned_cols=156 Identities=13% Similarity=0.122 Sum_probs=108.0
Q ss_pred ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCCCCHHHHHH
Q 024300 97 SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGRE 176 (269)
Q Consensus 97 ~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~~~~~~~~~ 176 (269)
++...+.+.++++.+|++ +++|+|||+++.. +|..++..+.+.+ +++++|+++||++|+..|++......+..+.
T Consensus 164 ~~~~~~~~~~~~~~ak~~--g~~v~~D~n~r~~--lw~~~~~~~~~~~-~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~ 238 (351)
T 4gm6_A 164 STFWLEMVVKIIREAKRN--GIKISFDMNYRAK--LWELEAAKRAYQQ-LLPLVDYCSAGQMDAVAFFEISSETTDYYQA 238 (351)
T ss_dssp CHHHHHHHHHHHHHHHHT--TCEEEEECCCCTT--TSCHHHHHHHHHH-HGGGCSEEECCHHHHHHTSCCCTTCSCHHHH
T ss_pred chhHHHHHHHHHHHHHHc--CCCcccCCCcCch--hhhhhhHHHHHHH-HHHhCCccccCHHHHHHHhCCCCchhHHHHH
Confidence 445568889999999998 9999999999854 4544455566665 8999999999999999999976433333222
Q ss_pred HHHHHHh----cCCCeEEEEeee-cCCcEEEEeeeccCCCCCCceEEEEccc-cC-CCCCCchHHHHHHHHHhhccCCCC
Q 024300 177 ACKILHA----AGPAKVVITSIN-IDGNLFLIGSHQKEKGQSPEQFKIVIPK-IP-AYFTGTGDLMTALLLGWSNKYRDN 249 (269)
Q Consensus 177 a~~~l~~----~g~~~Vvvt~g~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~dt~GaGDaf~a~~~~~l~~~g~~ 249 (269)
..+.+.. .+.+.++++.+. ..+..++.. ++.++.+..+ .+ +||+||||+|+|+|+++|++ |++
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---------~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~-g~~ 308 (351)
T 4gm6_A 239 MHDKYPNIELFYATKRTVISASHHLLQGHLWTQ---------GECWESEEYAIYPIVDRVGGGDAYTAAVLHGILS-EWR 308 (351)
T ss_dssp HHHHCTTCCEEEEEEEEEEETTEEEEEEEEEET---------TEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHT-TCC
T ss_pred HHhhhhhhhhhhccccceeeeccCCceEEEEeC---------CceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHC-CCC
Confidence 2222211 112223333321 112233322 2444444443 35 59999999999999999999 999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 024300 250 LDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 250 ~~~a~~~A~~~~~~~l~~ 267 (269)
+++|+++|++++.-++++
T Consensus 309 ~~~al~~A~aaaal~v~~ 326 (351)
T 4gm6_A 309 PDETVKFATAAAGLKHSI 326 (351)
T ss_dssp HHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 999999999999887764
No 52
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.87 E-value=2.5e-22 Score=173.44 Aligned_cols=192 Identities=17% Similarity=0.081 Sum_probs=137.9
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE--------eecCCCCCCcc---e--eecCHHHHHHHHHHHHhCCCccc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ--------FSNHTGYPTFK---G--QVLNGQQLCDLIEGLEANNLLYY 87 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~--------~~~~~g~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~ 87 (269)
..|.+|.|. +++.|+++||+++.+.... ..+..|-..+. + ..+++++++...+.+. .+
T Consensus 58 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~~~~~~~-----~~ 132 (299)
T 3ikh_A 58 LIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAV-----AG 132 (299)
T ss_dssp EECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGGGGTTCC-----TT
T ss_pred EEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHHHHhhhc-----cC
Confidence 577888774 5667899999998874221 00112211110 1 1344444433222222 35
Q ss_pred cEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCC
Q 024300 88 THLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFR 167 (269)
Q Consensus 88 ~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~ 167 (269)
+.+.++... ..+.+.++++.++++ ++++++||+.... .+. .+++++|+++||++|++.|++
T Consensus 133 ~~v~~~g~~---~~~~~~~~~~~a~~~--g~~v~~D~~~~~~-----------~~~-~ll~~~dil~~N~~E~~~l~g-- 193 (299)
T 3ikh_A 133 DILLQQGNF---SLDKTRALFQYARSR--GMTTVFNPSPVNP-----------DFC-HLWPLIDIAVVNESEAELLQP-- 193 (299)
T ss_dssp CEEEECSCS---CHHHHHHHHHHHHHT--TCEEEECCCSCCG-----------GGG-GCGGGCSEEEEEHHHHHHHCC--
T ss_pred CEEEECCCC---CHHHHHHHHHHHHHc--CCEEEEccccchh-----------hHH-HHHhhCCEEEecHHHHHHHhc--
Confidence 666655322 256677888999987 8999999965421 112 388999999999999999987
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHH-HHHHhhcc
Q 024300 168 IGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTA-LLLGWSNK 245 (269)
Q Consensus 168 ~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a-~~~~~l~~ 245 (269)
.|++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+| +|+++|++
T Consensus 194 ----------------~g~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~ 247 (299)
T 3ikh_A 194 ----------------YGVKTLVITQG-AAGAWLVQE---------GQRQFCPAVPAEALDTTGAGDTFLAVMLASALLR 247 (299)
T ss_dssp ----------------CSCSEEEEECG-GGCEEEECS---------SCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHT
T ss_pred ----------------CCCCEEEEEEC-CCceEEEeC---------CceEEeCCCCCccCCCCCchHHHHHHHHHHHHHc
Confidence 57899999998 689887743 256778877777 699999999999 99999998
Q ss_pred CCCCHHH-HHHHHHHHHHHHhhc
Q 024300 246 YRDNLDI-AAELAVSSLQVLLLL 267 (269)
Q Consensus 246 ~g~~~~~-a~~~A~~~~~~~l~~ 267 (269)
|+++++ |+++|+++++.++++
T Consensus 248 -g~~~~~~a~~~a~~~aa~~v~~ 269 (299)
T 3ikh_A 248 -GVAPDALALAHASRAAAITVSR 269 (299)
T ss_dssp -TSSSCHHHHHHHHHHHHHHHHS
T ss_pred -CCCHHHHHHHHHHHHHHHHhCC
Confidence 999999 999999999998875
No 53
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.86 E-value=1.3e-21 Score=169.98 Aligned_cols=207 Identities=17% Similarity=0.144 Sum_probs=142.9
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE--------eecCCCCCCc---ce---eecCHHHHHHHHHHHHhCCCcc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ--------FSNHTGYPTF---KG---QVLNGQQLCDLIEGLEANNLLY 86 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~--------~~~~~g~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
..|.+|.|. +++.|+++||+++.+.... +....|-..+ .+ ..+++++++. +.+.+.++++
T Consensus 52 ~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~g~~~~~~~~~~a~~~l~~~~~~~--~~l~~~~~~~ 129 (313)
T 3ewm_A 52 LISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDDVAYFNMTLNDINW--DIVEEAKIVN 129 (313)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSSSSCEEEECCSSGGGCCCGGGCCH--HHHHHCSEEE
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecCCCcceEeeccCHHHhCChhhCCH--HHhCCCCEEE
Confidence 567777764 5677899999988775321 0001121111 11 2344444432 2355544432
Q ss_pred ccEEEEccc-CChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccC--ChhhHHHHHHhccCCCcEEcCCHHHHHHh
Q 024300 87 YTHLLTGYI-GSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYV--PSELVSVYREKVVPVASMLTPNQFEAEQL 163 (269)
Q Consensus 87 ~~~i~~G~l-~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~--~~~~~~~~~~~ll~~~dii~pN~~E~~~l 163 (269)
..|++ ..+...+.+.++++.++ . +++++|||+++.. +|. .++..+.+++ +++++|+++||++|++.|
T Consensus 130 ----~~g~~~~~~~~~~~~~~~~~~a~-~--~~~v~~Dp~~~~~--~~~~~~~~~~~~~~~-~l~~~di~~~N~~E~~~l 199 (313)
T 3ewm_A 130 ----FGSVILARNPSRETVMKVIKKIK-G--SSLIAFDVNLRLD--LWRGQEEEMIKVLEE-SIKLADIVKASEEEVLYL 199 (313)
T ss_dssp ----EESGGGGSTTHHHHHHHHHHHHB-T--TBEEEEECCCCGG--GGTTCHHHHHHHHHH-HHHHCSEEEEEHHHHHHH
T ss_pred ----EcCcccCCcchHHHHHHHHHHhc-c--CCEEEEeCCCChH--HcCCCHHHHHHHHHH-HHhhCCEEecCHHHHHHH
Confidence 33443 23445678888888887 4 7899999987632 332 2344455555 889999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHh
Q 024300 164 TGFRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGW 242 (269)
Q Consensus 164 ~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~ 242 (269)
.+.... ..+...|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+++
T Consensus 200 ~~~~~~-------------~~~~~~vviT~G-~~G~~~~~~---------~~~~~~~~~~v~vvDttGAGDaf~a~~~~~ 256 (313)
T 3ewm_A 200 ENQGVE-------------VKGSMLTAITLG-PKGCRLIKN---------ETVVDVPSYNVNPLDTTGAGDAFMAALLVG 256 (313)
T ss_dssp HTTTCC-------------CCCSSEEEEECG-GGEEEEEET---------TEEEEEECCCCCCSCCTTHHHHHHHHHHHH
T ss_pred hccCcc-------------ccCceEEEEEEC-CCCeEEEEC---------CeeEEcCCCCcccCCCCCchHHHHHHHHHH
Confidence 875321 123556899998 689888754 356778887777 69999999999999999
Q ss_pred hc--cCCCCHHHHHHHHHHHHHHHhhc
Q 024300 243 SN--KYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 243 l~--~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+ + |+++++|+++|+++++..+++
T Consensus 257 l~~~~-g~~l~~a~~~A~~~aa~~v~~ 282 (313)
T 3ewm_A 257 ILKLK-GLDLLKLGKFANLVAALSTQK 282 (313)
T ss_dssp HHHSS-SCCHHHHHHHHHHHHHHHTTS
T ss_pred HHhcC-CCCHHHHHHHHHHHHHHHHcc
Confidence 98 8 999999999999999988875
No 54
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.86 E-value=6.6e-22 Score=170.99 Aligned_cols=148 Identities=16% Similarity=0.083 Sum_probs=114.9
Q ss_pred ccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCC
Q 024300 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (269)
Q Consensus 87 ~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~ 166 (269)
++++.++.. . .+.+.++++.++++ + +++|||+++.. .| . .+.+++ +++++|+++||++|++.|+|.
T Consensus 131 ~~~v~~~~~---~-~~~~~~~~~~a~~~--g-~v~~D~~~~~~--~~-~---~~~~~~-~l~~~dil~~N~~E~~~l~g~ 196 (302)
T 2c4e_A 131 TEIVHIATG---D-PEFNLKCAKKAYGN--N-LVSFDPGQDLP--QY-S---KEMLLE-IIEHTNFLFMNKHEFERASNL 196 (302)
T ss_dssp EEEEEECSS---C-HHHHHHHHHHHBTT--B-EEEECCGGGGG--GC-C---HHHHHH-HHHTCSEEEEEHHHHHHHHHH
T ss_pred CCEEEEeCC---C-cHHHHHHHHHHHhc--C-CEEEeCchhhh--hh-h---HHHHHH-HHhcCCEEEcCHHHHHHHhCC
Confidence 566666542 1 26778888999887 8 99999986521 12 2 233444 789999999999999999875
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC--CCCCCchHHHHHHHHHhhc
Q 024300 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP--AYFTGTGDLMTALLLGWSN 244 (269)
Q Consensus 167 ~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dt~GaGDaf~a~~~~~l~ 244 (269)
...+.. .|++. ++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+++|+
T Consensus 197 ~~~~~~-------~l~~~-~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~ 258 (302)
T 2c4e_A 197 LNFEID-------DYLER-VDALIVTKG-SKGSVIYTK---------DKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYV 258 (302)
T ss_dssp HTCCHH-------HHHTT-CSEEEEECG-GGCEEEECS---------SCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHH
T ss_pred CCccHH-------HHHhc-CCEEEEEEC-CCceEEEeC---------CcEEEeCCccCCcCCcCCCchHHHHHHHHHHHH
Confidence 322211 56667 899999998 689887643 256677877776 5999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhhc
Q 024300 245 KYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 245 ~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+ |+++++|+++|+++++..+++
T Consensus 259 ~-g~~~~~a~~~a~~~aa~~~~~ 280 (302)
T 2c4e_A 259 K-GYDLEKCGLIGAATASFVVEA 280 (302)
T ss_dssp T-TCCHHHHHHHHHHHHHHHTTS
T ss_pred c-CCCHHHHHHHHHHHHHHHHcc
Confidence 8 999999999999999998876
No 55
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.85 E-value=3.2e-21 Score=169.06 Aligned_cols=206 Identities=18% Similarity=0.106 Sum_probs=138.9
Q ss_pred ccCcccccc--chHHHHhcCCceeeeceEE---------eecCCCCCCc---ce--eecCHHHHHHHHHHHHhCCCcccc
Q 024300 25 VQGYVGNKS--AVFPLQLLGYDVDPIHSVQ---------FSNHTGYPTF---KG--QVLNGQQLCDLIEGLEANNLLYYT 88 (269)
Q Consensus 25 ~~g~~G~~a--~~~~l~~~Gv~~~~i~~~~---------~~~~~g~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~ 88 (269)
..|.+|.|. +++.|++.||+++++.... ..+..|-..+ .+ ..++.+++......+.+ ++
T Consensus 76 ~i~~vG~D~g~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~l~~-----~~ 150 (334)
T 2pkf_A 76 LVGAAGADFADYRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSAIGK-----PE 150 (334)
T ss_dssp EECEECGGGHHHHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHHHHHHHCS-----CS
T ss_pred EEEEEeCchHHHHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcChhhhhhcC-----CC
Confidence 466777653 4567888999887664321 0011121111 01 11222334333222333 45
Q ss_pred EEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCC
Q 024300 89 HLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI 168 (269)
Q Consensus 89 ~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~ 168 (269)
.+.++.. ..+.+.++++.++++ ++++++||+++.. +| .. +.+++ +++++|+++||++|++.|+|...
T Consensus 151 ~v~~~~~----~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~-~~---~~l~~-~l~~~dil~~N~~E~~~l~g~~~ 217 (334)
T 2pkf_A 151 LVIIGAN----DPEAMFLHTEECRKL--GLAFAADPSQQLA--RL-SG---EEIRR-LVNGAAYLFTNDYEWDLLLSKTG 217 (334)
T ss_dssp EEEEESC----CHHHHHHHHHHHHHH--TCCEEEECGGGGG--TS-CH---HHHHT-TTTTCSEEEEEHHHHHHHHHHHC
T ss_pred EEEEcCC----ChHHHHHHHHHHHhc--CCeEEEeccchhh--hh-hH---HHHHH-HHhcCCEEecCHHHHHHHhccCC
Confidence 5554331 235677888889888 8999999998742 22 22 23444 89999999999999999987533
Q ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCc-eEEEEccccC--CCCCCchHHHHHHHHHhhcc
Q 024300 169 GSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPE-QFKIVIPKIP--AYFTGTGDLMTALLLGWSNK 245 (269)
Q Consensus 169 ~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~dt~GaGDaf~a~~~~~l~~ 245 (269)
.+.+ .+.+. ++.|++|.| .+|++++.. ++ .++++.++++ +||+||||+|+|+|+++|++
T Consensus 218 ~~~~-------~l~~~-~~~vvvt~G-~~G~~~~~~---------~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~ 279 (334)
T 2pkf_A 218 WSEA-------DVMAQ-IDLRVTTLG-PKGVDLVEP---------DGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSA 279 (334)
T ss_dssp CCHH-------HHHTT-CSCEEEECG-GGCEEEECT---------TSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHT
T ss_pred CCHH-------HHHhc-CCEEEEEeC-CCCeEEEeC---------CCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHc
Confidence 2222 23443 889999998 689887643 24 6678777775 49999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHhhc
Q 024300 246 YRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 246 ~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+++++|+++|+++++..+++
T Consensus 280 -g~~~~~a~~~A~~~aa~~v~~ 300 (334)
T 2pkf_A 280 -GLGLERSAQLGSLVAVLVLES 300 (334)
T ss_dssp -TCCHHHHHHHHHHHHHHHHTS
T ss_pred -CCCHHHHHHHHHHHHHHHHhC
Confidence 999999999999999998876
No 56
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.85 E-value=1.3e-20 Score=162.87 Aligned_cols=219 Identities=18% Similarity=0.174 Sum_probs=144.0
Q ss_pred CCCccccCCCCCCCcEEEEecccccCccccccchHHHHhcCCceeeeceEEeecCCC-----CCCcceeec-CHHHHHHH
Q 024300 2 APPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTG-----YPTFKGQVL-NGQQLCDL 75 (269)
Q Consensus 2 ~~~~~~~~~~~~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g-----~~~~~~~~~-~~~~~~~~ 75 (269)
-|++-+..+|++.|+||+|+|++.+|++|..+++.+++. |.+...+-+. ++..+ .+++....+ ..++++.+
T Consensus 32 lp~r~~~~hKg~~G~vlvIaGsd~~~GA~ilA~~aal~~-Gaglvt~~t~--~~~~~~v~~~~pe~~~~~~~~~~ql~~~ 108 (310)
T 2r3b_A 32 ITQRPSDSYKSNFGRVVLIGGNRQYGGAIIMSTEACINS-GAGLTTVITD--VKNHGPLHARCPEAMVVGFEETVLLTNV 108 (310)
T ss_dssp CBCCCTTCCGGGGCEEEEECCCSSSHHHHHHHHHHHHHH-TCSEEEEECC--GGGHHHHHHHCTTCEEECTTCHHHHHHH
T ss_pred CCCCCCCCCCCcCCEEEEEECCCCCCcHHHHHHHHHHHh-CcCcEEEEEC--hhhHhHHhhCChhheEecCCcHHHHHHH
Confidence 377888999999999999999999999999999999986 6544333322 23211 122211112 11333333
Q ss_pred HHHHHhCCCccccEEEEcc-cC-ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhcc--CCCc
Q 024300 76 IEGLEANNLLYYTHLLTGY-IG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV--PVAS 151 (269)
Q Consensus 76 ~~~~~~~~~~~~~~i~~G~-l~-~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll--~~~d 151 (269)
+ + .++++++|+ ++ +.+..+.+.++++.++ . ++|+|+||.... +...+ . .++ +.++
T Consensus 109 ~---~-----~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~--~~pvVlDa~g~~----ll~~~-----~-~~l~~~~~~ 167 (310)
T 2r3b_A 109 V---E-----QADVILIGPGLGLDATAQQILKMVLAQHQ-K--QQWLIIDGSAIT----LFSQG-----N-FSLTYPEKV 167 (310)
T ss_dssp H---H-----HCSEEEECTTCCSSHHHHHHHHHHHHHCC-T--TCEEEEETHHHH----HHHHT-----T-CCCSSGGGE
T ss_pred h---c-----cCCEEEEeCCCCCCHHHHHHHHHHHHhcC-C--CCcEEEcCCcch----hcccc-----h-hhhcCCCCE
Confidence 3 2 257888887 44 5555677777777654 3 789999994321 00000 0 123 4678
Q ss_pred EEcCCHHHHHHhhCCCCCCH-HHH-HHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCC
Q 024300 152 MLTPNQFEAEQLTGFRIGSE-ADG-REACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYF 228 (269)
Q Consensus 152 ii~pN~~E~~~l~g~~~~~~-~~~-~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt 228 (269)
+||||..|++.|+|.+..+. ++. .+++++| + ..|++|++ +.+++++ +..+ +..+..+ .++
T Consensus 168 viTPN~~E~~~L~g~~~~~~~~~~a~~aA~~l---g-~~VvlKG~---~~vi~~~---------~~~~-~~~~g~~~~~t 230 (310)
T 2r3b_A 168 VFTPHQMEWQRLSHLPIEQQTLANNQRQQAKL---G-STIVLKSH---RTTIFHA---------GEPF-QNTGGNPGMAT 230 (310)
T ss_dssp EEECCHHHHHHHHCCCGGGCCHHHHHHHHHHH---T-SEEEECST---TCEEECS---------SSCE-ECCCCCGGGCS
T ss_pred EEcCCHHHHHHHhCCCCCcccchHHHHHHHHh---C-cEEEEeCC---ceEEEEC---------CEEE-EECCCCCCCCC
Confidence 99999999999999876443 344 6677776 4 35666653 4566532 1333 3344444 478
Q ss_pred CCchHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Q 024300 229 TGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQV 263 (269)
Q Consensus 229 ~GaGDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~ 263 (269)
+|+||+|+|.+++.+++ |.++.+|+..|. ++..
T Consensus 231 ~GtGD~Lag~Iaa~lA~-g~~~~eA~~~A~-~~~~ 263 (310)
T 2r3b_A 231 GGTGDTLAGIIAGFLAQ-FKPTIETIAGAV-YLHS 263 (310)
T ss_dssp TTHHHHHHHHHHHHHHH-SCSSHHHHHHHH-HHHH
T ss_pred CChHHHHHHHHHHHHHc-CCCHHHHHHHHH-HHHH
Confidence 99999999988888899 999999999994 4444
No 57
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.85 E-value=1.9e-20 Score=161.89 Aligned_cols=223 Identities=17% Similarity=0.150 Sum_probs=145.3
Q ss_pred CCCccccCCCCCCCcEEEEecccccCccccccchHHHHhcCCceeeeceEEeecCCC-----CCCcceeecC-HHHHHHH
Q 024300 2 APPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTG-----YPTFKGQVLN-GQQLCDL 75 (269)
Q Consensus 2 ~~~~~~~~~~~~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g-----~~~~~~~~~~-~~~~~~~ 75 (269)
-|++-+..||++.|+||+|+|++.+|++|..+++.+++. |.+...+- +.++..+ .+++....+. .++++.+
T Consensus 46 lp~r~~~~hKg~~G~vlvIaGsd~~~GAgilA~~aal~~-Gaglvt~~--t~q~~~~~v~~~~pe~~~~~~~~~~ql~~~ 122 (311)
T 3bgk_A 46 IKPRPLNSHKGTFGRVLLIGGNYPYGGAIIMAALACVNS-GAGLVTVA--THKDNITALHSHLPEAMAFDMVEKDRLSEQ 122 (311)
T ss_dssp SCCCCSSCCSSTTCEEEEECCCTTCHHHHHHHHHHHHHT-TCSEEEEE--ECGGGHHHHHHHCTTSEEEETTCHHHHHHH
T ss_pred CCCCCCCCCCccCCEEEEEECCCCCCCHHHHHHHHHHHh-CcCeEEEE--EChhhHhHHhhCChhHheeccccHHHHHHH
Confidence 378889999999999999999999999999999999886 65543333 3223221 1222112221 1333333
Q ss_pred HHHHHhCCCccccEEEEcc-cC-ChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhcc-CCCcE
Q 024300 76 IEGLEANNLLYYTHLLTGY-IG-SVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVV-PVASM 152 (269)
Q Consensus 76 ~~~~~~~~~~~~~~i~~G~-l~-~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll-~~~di 152 (269)
+ + .++++++|+ +. +.+..+.+.++++.++ . ++|+|+||.... +...+ .+.++ +.+++
T Consensus 123 ~---~-----~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~--~~pvVlDa~g~~----ll~~~-----~~l~L~~~~~v 182 (311)
T 3bgk_A 123 I---T-----AADVVLMGPGLAEDDLAQTTFDVVWQAIE-P--KQTLIIDGSAIN----LLAKR-----KPAIWPTKQII 182 (311)
T ss_dssp H---H-----HCSEEEECTTCCSSHHHHHHHHHHHHHCC-T--TSEEEEETHHHH----HHHHC-----C-CCCSCSCEE
T ss_pred h---c-----cCCEEEEcCCCCCCHHHHHHHHHHHHHcC-C--CCeEEEeCChhh----hhccC-----hhhcCCCCCEE
Confidence 2 2 257888987 44 5555677777777654 3 789999994321 00000 01113 47899
Q ss_pred EcCCHHHHHHhhCCCCCCH-HHH-HHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCC
Q 024300 153 LTPNQFEAEQLTGFRIGSE-ADG-REACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFT 229 (269)
Q Consensus 153 i~pN~~E~~~l~g~~~~~~-~~~-~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~ 229 (269)
||||..|++.|+|.+..+. ++. .+++++|.+ + ..|++|++ +.+++++ +.. .+..+..+ .+++
T Consensus 183 iTPN~~E~~~L~g~~~~~~~~d~~~~aa~~l~~-g-~~VvlkG~---~~~i~~~---------~~~-~~~~~~~~~~~t~ 247 (311)
T 3bgk_A 183 LTPHQKEWERLSGLTIPEQIEAATQTALAHFPK-E-TILVAKSH---QTKIYQG---------QKI-GHIQVGGPYQATG 247 (311)
T ss_dssp EECCSCC-CTTTCCCSTTCCHHHHHHHHTTSCT-T-CEEEECSS---SCEEEET---------TEE-EEECCCCGGGCST
T ss_pred ECCcHHHHHHHhCCCCCcchhhHHHHHHHHHhc-C-CEEEEeCC---CeEEEEC---------CEE-EEECCCCCCCCCC
Confidence 9999999999999876554 466 777788776 4 45555553 4566542 233 34455555 4789
Q ss_pred CchHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Q 024300 230 GTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQV 263 (269)
Q Consensus 230 GaGDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~ 263 (269)
|+||+|+|.+++.+++.|.++.+|++.|. ++..
T Consensus 248 GtGD~Lag~iaa~lA~~g~~~~eA~~~A~-~~~~ 280 (311)
T 3bgk_A 248 GMGDTLAGMIAGFVAQFHTDRFEVAAAAV-FLHS 280 (311)
T ss_dssp THHHHHHHHHHHHHHHCCSCHHHHHHHHH-HHHH
T ss_pred cHHHHHHHHHHHHHHccCCCHHHHHHHHH-HHHH
Confidence 99999987777777731789999999994 4443
No 58
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.82 E-value=4e-20 Score=160.46 Aligned_cols=192 Identities=17% Similarity=0.188 Sum_probs=134.6
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEEeecCCC----------CCCcceeecC-HHHHHHHHHHHHhCCCccccE
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTG----------YPTFKGQVLN-GQQLCDLIEGLEANNLLYYTH 89 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~g----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 89 (269)
..|.+|.|. +++.|+++||+++.+.... ..|+ -..+. .... ...+.++.+.+. .++.
T Consensus 75 ~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~--~~T~~~~~~~~~~g~~~~~-~~~ga~~~l~~~~~~l~-----~~~~ 146 (310)
T 3go6_A 75 FSGAFGDDPAAAQLRAHLRANAVGLDRTVTVP--GPSGTAIIVVDASAENTVL-VAPGANAHLTPVPSAVA-----NCDV 146 (310)
T ss_dssp EECEECSSHHHHHHHHHHHHTTCBCTTCEECS--SCCEEEEEEECTTSCEEEE-EECGGGGGCCCCTTTTT-----TCSE
T ss_pred EEEEECCCHHHHHHHHHHHHcCCccceeEecC--CCCCEEEEEEcCCCCEEEE-ecCChhhhHHHHHHHhh-----cCCE
Confidence 467777764 5667899999988774321 1222 11110 0000 011111111222 3566
Q ss_pred EEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCCC
Q 024300 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIG 169 (269)
Q Consensus 90 i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~~ 169 (269)
+.++.. ...+.+.++++.++++ ++++++||++... ..+.+++ +++++|+++||++|++.|++.
T Consensus 147 v~~~~~---~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--------~~~~~~~-ll~~~dil~~N~~Ea~~l~g~--- 209 (310)
T 3go6_A 147 LLTQLE---IPVATALAAARAAQSA--DAVVMVNASPAGQ--------DRSSLQD-LAAIADVVIANEHEANDWPSP--- 209 (310)
T ss_dssp EEECSS---SCHHHHHHHHHHHHHT--TCEEEEECCSSSC--------CHHHHHH-HHHHCSEEEEEHHHHHHSSSC---
T ss_pred EEECCC---CCHHHHHHHHHHHHHc--CCEEEEcCCcccc--------chHHHHH-HHhhCCEEEeCHHHHHHHhCC---
Confidence 665532 2356777888999987 8999999976531 1234444 788999999999999999873
Q ss_pred CHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhccC--
Q 024300 170 SEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNKY-- 246 (269)
Q Consensus 170 ~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~~-- 246 (269)
++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+++|++.
T Consensus 210 ----------------~~~vvvt~G-~~Ga~~~~~---------~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~ 263 (310)
T 3go6_A 210 ----------------PTHFVITLG-VRGARYVGA---------DGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPG 263 (310)
T ss_dssp ----------------CSEEEEECG-GGCEEEEET---------TEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSC
T ss_pred ----------------CCEEEEEEC-CCCEEEEEC---------CceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhccc
Confidence 789999998 689988754 356778877777 699999999999999999942
Q ss_pred -CCCHHHHHHHHHHHHHHHhhc
Q 024300 247 -RDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 247 -g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+++++|+++|+++++..+++
T Consensus 264 ~g~~l~~a~~~A~~~aa~~v~~ 285 (310)
T 3go6_A 264 SPAERLRALRRACAAGALATLV 285 (310)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHHHhCC
Confidence 789999999999999998875
No 59
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.81 E-value=1.3e-19 Score=157.40 Aligned_cols=204 Identities=13% Similarity=0.066 Sum_probs=134.4
Q ss_pred ccCcccccc----chHHHHhcCCceeeeceEE----------eecCCCCCCc---c--eeecCHHHHHHHHHHHHhCCCc
Q 024300 25 VQGYVGNKS----AVFPLQLLGYDVDPIHSVQ----------FSNHTGYPTF---K--GQVLNGQQLCDLIEGLEANNLL 85 (269)
Q Consensus 25 ~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~----------~~~~~g~~~~---~--~~~~~~~~~~~~~~~~~~~~~~ 85 (269)
..|.+|.|. +++.|+++||+++.+.... +....|-..+ . ...++.++++.. .+.
T Consensus 73 ~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~--~l~----- 145 (312)
T 2hlz_A 73 FMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKV--DLT----- 145 (312)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHTS--CGG-----
T ss_pred EEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhHh--hhc-----
Confidence 467778664 5667899999987654321 0111221111 0 123455444321 122
Q ss_pred cccEEEEcccCChhhHHHHHHHHHHHHhcC-C-----CceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHH
Q 024300 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSIN-P-----NLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (269)
Q Consensus 86 ~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~-~-----~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E 159 (269)
.++.+.++... .+.+.++++.++++. + ++++++||.... + .+++ +++++|+++||++|
T Consensus 146 ~~~~v~~~~~~----~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~~--------~---~~~~-~l~~~dil~~n~~e 209 (312)
T 2hlz_A 146 QFKWIHIEGRN----ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPR--------E---ELFQ-LFGYGDVVFVSKDV 209 (312)
T ss_dssp GEEEEEEECSS----HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSCC--------G---GGGG-GGGSSSEEEECHHH
T ss_pred cCCEEEEeccC----HHHHHHHHHHHHHhcccccCCCCeEEEEEcccch--------H---HHHH-HHhcCCEEEEcHHH
Confidence 25555554432 234556666666541 1 468999984321 1 1223 88999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHhcCC--CeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEc-cccC-CCCCCchHHH
Q 024300 160 AEQLTGFRIGSEADGREACKILHAAGP--AKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVI-PKIP-AYFTGTGDLM 235 (269)
Q Consensus 160 ~~~l~g~~~~~~~~~~~a~~~l~~~g~--~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~dt~GaGDaf 235 (269)
++.| |. ++.+++++.+.+++. +.|++|.| .+|++++... ++.++++. +.++ +||+||||+|
T Consensus 210 a~~l-g~-----~~~~~~~~~l~~~~~~g~~vvvt~G-~~G~~~~~~~--------~~~~~~~~~~~~~vvdt~GAGDaf 274 (312)
T 2hlz_A 210 AKHL-GF-----QSAEEALRGLYGRVRKGAVLVCAWA-EEGADALGPD--------GKLLHSDAFPPPRVVDTLGAGDTF 274 (312)
T ss_dssp HHHT-TC-----CSHHHHHHHHGGGSCTTCEEEEECG-GGCEEEECTT--------CCEEEECCCCCSSCCCCTTHHHHH
T ss_pred HHHc-CC-----CCHHHHHHHHHHhcCCCCEEEEEec-ccCeEEEccC--------CCEEECCCCCCCCcccCCCchHHH
Confidence 9987 64 245566677766544 89999998 6898876421 24566776 3445 6999999999
Q ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 236 TALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 236 ~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+|+|+++|++ |+++++|+++|++++...+++
T Consensus 275 ~a~~~~~l~~-g~~~~~a~~~a~~~aa~~v~~ 305 (312)
T 2hlz_A 275 NASVIFSLSQ-GRSVQEALRFGCQVAGKKCGL 305 (312)
T ss_dssp HHHHHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHhh
Confidence 9999999998 999999999999999998875
No 60
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.80 E-value=1.6e-19 Score=157.76 Aligned_cols=149 Identities=19% Similarity=0.149 Sum_probs=114.2
Q ss_pred ccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCC
Q 024300 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGF 166 (269)
Q Consensus 87 ~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~ 166 (269)
++.+.++. ...+.+.++++.++++ +++++|||+++.. .| .. +.+++ +++++|+++||++|++.|+|.
T Consensus 136 ~~~v~~~~----~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~-~~---~~~~~-~l~~~dil~~N~~Ea~~l~g~ 202 (326)
T 3b1n_A 136 IKLAIVGP----DGFQGMVQHTEELAQA--GVPFIFDPGQGLP--LF-DG---ATLRR-SIELATYIAVNDYEAKLVCDK 202 (326)
T ss_dssp CSEEEECS----CCHHHHHHHHHHHHHH--TCCEEECCGGGGG--GC-CH---HHHHH-HHHHCSEEEEEHHHHHHHHHH
T ss_pred CCEEEECC----ccHHHHHHHHHHHHHC--CCEEEEeCchhhh--hc-cH---HHHHH-HHHhCCEEecCHHHHHHHhCC
Confidence 56665543 2245677888889888 8999999998742 22 22 23444 788999999999999999875
Q ss_pred CCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC--CCCCCchHHHHHHHHHhhc
Q 024300 167 RIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP--AYFTGTGDLMTALLLGWSN 244 (269)
Q Consensus 167 ~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dt~GaGDaf~a~~~~~l~ 244 (269)
...+.+ .+.+ +++.|++|.| .+|++++.. ++.+++++++++ +||+||||+|+|+|+++|+
T Consensus 203 ~~~~~~-------~l~~-~~~~vvvT~G-~~Ga~~~~~---------~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~ 264 (326)
T 3b1n_A 203 TGWSED-------EIAS-RVQALIITRG-EHGATIRHR---------DGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIE 264 (326)
T ss_dssp HCCCHH-------HHHT-TSSEEEEECG-GGCEEEEET---------TEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHH
T ss_pred CCCCHH-------HHHh-cCCEEEEecC-CCceEEEEC---------CcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHH
Confidence 332222 2333 3889999998 689888753 256677777775 4999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhhc
Q 024300 245 KYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 245 ~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
+ |+++++|+++|++++...+++
T Consensus 265 ~-g~~~~~a~~~A~~~aa~~v~~ 286 (326)
T 3b1n_A 265 H-GFDWATAGRLASLMGALKIAH 286 (326)
T ss_dssp T-TCCHHHHHHHHHHHHHHHHTS
T ss_pred c-CCCHHHHHHHHHHHHHHHHcC
Confidence 8 999999999999999998875
No 61
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.78 E-value=7.4e-19 Score=151.60 Aligned_cols=209 Identities=16% Similarity=0.073 Sum_probs=138.1
Q ss_pred ccCcccccc--chHHHHhcCCceeeeceE------EeecCCCCCCc---c--eeecCHHHHHHHHHHHHhCCCccccEEE
Q 024300 25 VQGYVGNKS--AVFPLQLLGYDVDPIHSV------QFSNHTGYPTF---K--GQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (269)
Q Consensus 25 ~~g~~G~~a--~~~~l~~~Gv~~~~i~~~------~~~~~~g~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 91 (269)
..|.+|.|. +++.|++.||+++.+... ......|-..+ . ...+++++++. . .++.+.
T Consensus 55 ~i~~vG~D~~~~~~~L~~~gVd~~~v~~~~~t~~~~i~~~~g~~~~~~~~~~~~~l~~~~~~~-----~-----~~~~v~ 124 (298)
T 1vk4_A 55 VITKCTREDVSKFSFLRDNGVEVVFLKSPRTTSIENRYGSDPDTRESFLISAADPFTESDLAF-----I-----EGEAVH 124 (298)
T ss_dssp EEEEECTTTGGGGTTTGGGTCEEEEEECSSCEEEEEEC-----CCEEEEEECCCCCCGGGGGG-----C-----CSSEEE
T ss_pred EEEEEcCCHHHHHHHHHHcCCceEEEecCCCcEEEEEEcCCCCeeEEEeccccccCCHHHcCc-----C-----CCCEEE
Confidence 455666554 455788999998877421 00011121111 1 12344444322 1 356777
Q ss_pred EcccCChhhHHHHHHHHHHHHhcCCCceEEEccccc-cC--CCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCC
Q 024300 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG-DE--GKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI 168 (269)
Q Consensus 92 ~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~-~~--~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~ 168 (269)
+|.+...+ ...++++.++++ ++++++||++. .. +..+ .....+.+.+ +++++|+++||++|++.|+|..
T Consensus 125 ~~~~~~~~---~~~~~~~~~~~~--g~~v~~D~~~~~~~~~~~~~-~~~~~~~~~~-~l~~~dil~~N~~E~~~l~g~~- 196 (298)
T 1vk4_A 125 INPLWYGE---FPEDLIPVLRRK--VMFLSADAQGFVRVPENEKL-VYRDWEMKEK-YLKYLDLFKVDSREAETLTGTN- 196 (298)
T ss_dssp ECCSSTTS---SCGGGHHHHHHH--CSEEEEETHHHHEEEETTEE-EECCCTTHHH-HGGGCSEEEEEHHHHHHHHSCS-
T ss_pred ECCccccc---ccHHHHHHHHHc--CCEEEEecCccccccccccc-cccchHHHHh-hcccCCEEecCHHHHHHHhCCC-
Confidence 77653211 223556777777 89999999742 10 0000 0000011333 7899999999999999999863
Q ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHHHHHHhhccCC
Q 024300 169 GSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTALLLGWSNKYR 247 (269)
Q Consensus 169 ~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a~~~~~l~~~g 247 (269)
+.+++++.|.+.|++.|++|+ .+|++++.. +.++++.++++ +||+||||+|+|+|+++|++.|
T Consensus 197 ----~~~~~~~~l~~~g~~~vvvT~--~~G~~~~~~----------~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g 260 (298)
T 1vk4_A 197 ----DLRESCRIIRSFGAKIILATH--ASGVIVFDG----------NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKK 260 (298)
T ss_dssp ----CHHHHHHHHHHTTCSSEEEEE--TTEEEEESS----------SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSC
T ss_pred ----CHHHHHHHHHhcCCCEEEEEc--CCCcEEEeC----------CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcC
Confidence 567778888889999999999 488877631 34567777776 6999999999999999999328
Q ss_pred CCHHHHHHHHHHHHHHHhhc
Q 024300 248 DNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 248 ~~~~~a~~~A~~~~~~~l~~ 267 (269)
+++++|+++|+++++.++++
T Consensus 261 ~~~~~a~~~A~a~aa~~v~~ 280 (298)
T 1vk4_A 261 MSIEKATKFAAAVTSVKMRH 280 (298)
T ss_dssp CCHHHHHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHHHHcc
Confidence 99999999999999998875
No 62
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.77 E-value=3.6e-18 Score=145.39 Aligned_cols=152 Identities=16% Similarity=0.111 Sum_probs=107.1
Q ss_pred EEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccC--CCcEEcCCHHHHHHhhCCC
Q 024300 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQLTGFR 167 (269)
Q Consensus 90 i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~--~~dii~pN~~E~~~l~g~~ 167 (269)
+.+|++ +....+.+.++++.++++ ++|+|+||+..... .-..+..++ +++ ++++|+||..|++.|+|..
T Consensus 64 i~~G~~-~~~~~~~~~~~~~~a~~~--~~pvVlDp~g~~~~-----~~~~~~~~~-ll~~~~~~vitPN~~E~~~L~g~~ 134 (272)
T 1ekq_A 64 LNIGTL-SKESVEAMIIAGKSANEH--GVPVILDPVGAGAT-----PFRTESARD-IIREVRLAAIRGNAAEIAHTVGVT 134 (272)
T ss_dssp EECTTC-CHHHHHHHHHHHHHHHHT--TCCEEEECTTBTTB-----HHHHHHHHH-HHHHSCCSEEEECHHHHHHHCC--
T ss_pred EECCCC-CHHHHHHHHHHHHHHHhc--CCeEEEeCCCcCcc-----cchHHHHHH-HHccCCCeEECCCHHHHHHHhCCC
Confidence 456774 556678888999999887 89999999765321 000112223 555 8999999999999999976
Q ss_pred -C--------CCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHHH
Q 024300 168 -I--------GSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMTA 237 (269)
Q Consensus 168 -~--------~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~a 237 (269)
. .+.++..++++.|.+.+...|++| | ..+ ++.++ ++.+.++.+... .+++|+||+|+|
T Consensus 135 ~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G-~~~-~i~~~---------~~~~~~~~~~~~~~~ttGaGD~lag 202 (272)
T 1ekq_A 135 DWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-G-EVD-VIADT---------SHVYTLHNGHKLLTKVTGAGCLLTS 202 (272)
T ss_dssp -------------HHHHHHHHHHHHHHTSEEEEC-S-SSE-EEECS---------SCEEEECCCCGGGGGSTTHHHHHHH
T ss_pred cccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-C-CCC-EEEeC---------CEEEEEcCCCccccCccCchHHHHH
Confidence 4 345678888899987765667777 5 334 55432 245666654444 489999999999
Q ss_pred HHHHhhccCCCCHHHHHHHHHHHHHH
Q 024300 238 LLLGWSNKYRDNLDIAAELAVSSLQV 263 (269)
Q Consensus 238 ~~~~~l~~~g~~~~~a~~~A~~~~~~ 263 (269)
++++.+++ |.++.+|+++|..+...
T Consensus 203 ~iaa~la~-g~~~~~A~~~A~~~~~~ 227 (272)
T 1ekq_A 203 VVGAFCAV-EENPLFAAIAAISSYGV 227 (272)
T ss_dssp HHHHHHTT-CSSHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CCCHHHHHHHHHHHHHH
Confidence 99999998 99999999999874443
No 63
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=99.74 E-value=2.7e-17 Score=150.41 Aligned_cols=223 Identities=16% Similarity=0.143 Sum_probs=142.7
Q ss_pred CCccccCCCCCCCcEEEEecccccCccccccchHHHHhcCCceeeeceEEe-e--cCCCCCCccee-------ecCHHHH
Q 024300 3 PPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQF-S--NHTGYPTFKGQ-------VLNGQQL 72 (269)
Q Consensus 3 ~~~~~~~~~~~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~-~--~~~g~~~~~~~-------~~~~~~~ 72 (269)
|++-...||++.|+||.|+|+..+++++..+....++ .|.+...+-+... . ..+..++.... .++.+++
T Consensus 233 p~r~~~~hKg~~G~vlvigGs~~~~GA~~Laa~aAlr-~GaGlv~~~~~~~~~~~~~~~~PE~m~~~~~~~~~~~~~~~~ 311 (502)
T 3rss_A 233 PERPRDSHKGTYGKVLIIAGSRLYSGAPVLSGMGSLK-VGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNL 311 (502)
T ss_dssp CCCCSSCCGGGGCEEEEECCCSSCCSHHHHHHHHHHH-TTCSEEEEEEETTTHHHHHHHCTTSEEEEECCSSSSCCGGGH
T ss_pred CCCCCCCCCCCCceEEEEECCCCCCCHHHHHHHHHHH-hCcCeEEEEEcHHHHHHHhhcCCeEEEecccccccccchhhH
Confidence 7788999999999999999999999999888777776 4554444432210 0 00012222111 2334556
Q ss_pred HHHHHHHHhCCCccccEEEEccc-CChhh-HHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCC
Q 024300 73 CDLIEGLEANNLLYYTHLLTGYI-GSVSF-LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVA 150 (269)
Q Consensus 73 ~~~~~~~~~~~~~~~~~i~~G~l-~~~~~-~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~ 150 (269)
+++.+.+.. ++++.+|.. +..+. .+.+.+ .+++. ++|+|+||..... ..++ .++ ..+..
T Consensus 312 ~~~~~~~~~-----~davviGpGlg~~~~~~~~~~~---~l~~~--~~pvVlDadgl~~----l~~~---ll~--~~~~~ 372 (502)
T 3rss_A 312 QECLELSKD-----VDVVAIGPGLGNNEHVREFVNE---FLKTL--EKPAVIDADAINV----LDTS---VLK--ERKSP 372 (502)
T ss_dssp HHHHHHHTT-----CSEEEECTTCCCSHHHHHHHHH---HHHHC--CSCEEECHHHHHT----CCHH---HHH--HCSSC
T ss_pred HHHHHHhcc-----CCEEEEeCCCCCCHHHHHHHHH---HHHhc--CCCEEEeCcccch----hcHH---HHh--ccCCC
Confidence 666555543 677888863 22222 333333 33444 7899999966521 2212 222 24568
Q ss_pred cEEcCCHHHHHHhhCCCCCCH-HHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCC
Q 024300 151 SMLTPNQFEAEQLTGFRIGSE-ADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYF 228 (269)
Q Consensus 151 dii~pN~~E~~~l~g~~~~~~-~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt 228 (269)
+++|||..|++.|+|.+..+. ++ .++++++.+.+...|++|+. +.++++. ++.+ +.....+ .++
T Consensus 373 ~vlTPN~~E~~~L~g~~~~~~~~d-~~aa~~la~~~~~~VvlKG~---~~vi~~~---------~~~~-~~~~g~~~~at 438 (502)
T 3rss_A 373 AVLTPHPGEMARLVKKTVGDVKYN-YELAEEFAKENDCVLVLKSA---TTIVTDG---------EKTL-FNITGNTGLSK 438 (502)
T ss_dssp EEECCCHHHHHHHHTCCHHHHTTC-HHHHHHHHHHHTSEEEECSS---SEEEECS---------SCEE-EECCCCGGGSS
T ss_pred EEEeCCHHHHHHHhCCCccchHHH-HHHHHHHHHHcCCEEEEeCC---CeEEEcC---------CEEE-EECCCCCcccc
Confidence 999999999999999764322 34 66778887655445565552 4455532 2333 3333333 578
Q ss_pred CCchHHHHHHHHHhhccCCCCHHHHHHHHHHH
Q 024300 229 TGTGDLMTALLLGWSNKYRDNLDIAAELAVSS 260 (269)
Q Consensus 229 ~GaGDaf~a~~~~~l~~~g~~~~~a~~~A~~~ 260 (269)
+|+||+|+|.+++.+++ |.++.+|+..|+..
T Consensus 439 ~GsGD~Lag~iaa~lA~-g~~~~~Aa~~A~~~ 469 (502)
T 3rss_A 439 GGSGDVLTGMIAGFIAQ-GLSPLEASTVSVYL 469 (502)
T ss_dssp TTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhC-CCCHHHHHHHHHHH
Confidence 99999999999999999 99999999998644
No 64
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.70 E-value=1.2e-17 Score=144.67 Aligned_cols=140 Identities=12% Similarity=0.068 Sum_probs=102.6
Q ss_pred cccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhC
Q 024300 86 YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTG 165 (269)
Q Consensus 86 ~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g 165 (269)
.++++.++... .+.++++.++ . ++++||+++.. . .. .+.+++ +++++|+++||++|++.|+|
T Consensus 140 ~~~~v~~~~~~------~~~~~~~~a~----~-~v~~D~~~~~~--~-~~---~~~~~~-~l~~~dil~~N~~E~~~l~g 201 (306)
T 3bf5_A 140 EYEYVHFSTGP------NYLDMAKSIR----S-KIIFDPSQEIH--K-YS---KDELKK-FHEISYMSIFNDHEYRVFRE 201 (306)
T ss_dssp CEEEEEECSSS------SHHHHHHHCC----S-EEEECCGGGGG--G-SC---HHHHHH-HHHHCSEEEEEHHHHHHHHH
T ss_pred CCCEEEECChH------HHHHHHHHhC----C-cEEEcCchhhh--h-cc---HHHHHH-HHhcCCEEEcCHHHHHHHhC
Confidence 35667666432 4455666553 4 99999986421 1 11 233444 78899999999999999987
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccCCCCCCchHHHHHHHHHhhcc
Q 024300 166 FRIGSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPAYFTGTGDLMTALLLGWSNK 245 (269)
Q Consensus 166 ~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGDaf~a~~~~~l~~ 245 (269)
....+.. .+ .|++|.| .+|++++.. ++.++++++++++||+||||+|+|+|+++|++
T Consensus 202 ~~~~~~~-------~l------~vvvT~G-~~Ga~~~~~---------~~~~~~~~~~v~vDttGAGDaF~ag~~~~l~~ 258 (306)
T 3bf5_A 202 MTGLSSP-------KV------TTIVTNG-ERGSSLFMD---------GKKYDFPAIPSSGDTVGAGDSFRAGLYLALYN 258 (306)
T ss_dssp HHCCSSC-------SS------CEEEEEG-GGEEEEEET---------TEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred CCCcCcc-------cE------EEEEeec-ccCeEEEeC---------CcEEEecCCcCCCCCCCccHHHHHHHHHHHHc
Confidence 5321110 11 1999998 689887753 25667777665589999999999999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHhhc
Q 024300 246 YRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 246 ~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
|+++++|+++|++++...+++
T Consensus 259 -g~~~~~a~~~A~~~aa~~v~~ 279 (306)
T 3bf5_A 259 -RRSIEKGMIYGTIIAHHVIDD 279 (306)
T ss_dssp -TCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999998876
No 65
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=99.69 E-value=1.1e-16 Score=136.06 Aligned_cols=221 Identities=14% Similarity=0.025 Sum_probs=137.5
Q ss_pred CCCccccCCCCCCCcEEEEecccccCccccccchHHHHhcCCceeeeceEE--e-ecCCCCCCcceeecCHHHHHHHHHH
Q 024300 2 APPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQ--F-SNHTGYPTFKGQVLNGQQLCDLIEG 78 (269)
Q Consensus 2 ~~~~~~~~~~~~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~--~-~~~~g~~~~~~~~~~~~~~~~~~~~ 78 (269)
-||+-...||++.|+|+.|+|+..+.++...+....++. |.+...+-+.. . ...+..++... .+...+.. .
T Consensus 18 lp~r~~~~hKg~~G~vlvigGs~~~~GA~~laa~aAlr~-GaGlv~~~~~~~~~~~~~~~~Pe~m~--~~~~~~~~---~ 91 (279)
T 3rpz_A 18 LPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRS-GLGKLVIGTSENVIPLIVPVLPEATY--WRDGWKKA---A 91 (279)
T ss_dssp CCCCCSSCCGGGGCEEEEECCBTTBCHHHHHHHHHHHTT-TCSEEEEEECTTTHHHHTTTCTTCEE--EETHHHHT---T
T ss_pred CCCCCCcCCCcCCCEEEEEeCCCCCCcHHHHHHHHHHHh-CCCeEEEEecHHHHHHHHhcCCeeEE--ccccccch---h
Confidence 378889999999999999999999999888777766643 44433332211 0 00122333311 11111111 0
Q ss_pred HHhCCCccccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHH
Q 024300 79 LEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQF 158 (269)
Q Consensus 79 ~~~~~~~~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~ 158 (269)
..+ ..-.+|++.+|..... .+...++++.+.+. +.|+|+|+.... . +. + ......++||||..
T Consensus 92 ~~~-~l~~~davviGPGlg~--~~~~~~~~~~~l~~--~~p~VlDAdal~-----~-~~----l--~~~~~~~vlTPN~~ 154 (279)
T 3rpz_A 92 DAQ-LEETYRAIAIGPGLPQ--TESVQQAVDHVLTA--DCPVILDAGALA-----K-RT----Y--PKREGPVILTPHPG 154 (279)
T ss_dssp TSC-CSSCCSEEEECTTCCC--CHHHHHHHHHHTTS--SSCEEECGGGCC-----S-CC----C--CCCSSCEEECCCHH
T ss_pred hHh-hccCCCEEEECCCCCC--CHHHHHHHHHHHhh--CCCEEEECCccc-----h-hh----h--hhccCCEEEecCHH
Confidence 111 1113788888864321 12234555666665 779999984331 1 00 0 01346799999999
Q ss_pred HHHHhhCCCCCCH-HHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCchHHHH
Q 024300 159 EAEQLTGFRIGSE-ADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTGDLMT 236 (269)
Q Consensus 159 E~~~l~g~~~~~~-~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaGDaf~ 236 (269)
|++.|+|....+. ++..+++++|.+.+...|++|++ +.++++. ++.+.+..+..+ ..++|+||+|+
T Consensus 155 E~~~L~g~~~~~~~~d~~~aa~~la~~~~~~VvlKG~---~~vi~~~---------~g~~~~~~~g~~~~at~GtGD~La 222 (279)
T 3rpz_A 155 EFFRMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGN---QTVIAFP---------DGDCWLNPTGNGALAKGGTGDTLT 222 (279)
T ss_dssp HHHHHHCCCHHHHTTSHHHHHHHHHHHHTSEEEECST---TCEEECT---------TSCEEECCCCCGGGCSTTHHHHHH
T ss_pred HHHHHhCCCccchHHHHHHHHHHHHHHcCeEEEEeCC---CcEEECC---------CceEEEeCCCCCCCCCCChHHHHH
Confidence 9999999865332 45667788887655456777763 4555532 223334433344 47899999999
Q ss_pred HHHHHhhccCCCCHHHHHHHHH
Q 024300 237 ALLLGWSNKYRDNLDIAAELAV 258 (269)
Q Consensus 237 a~~~~~l~~~g~~~~~a~~~A~ 258 (269)
|.+++.+++ |.++.+|+..|.
T Consensus 223 g~iaa~lA~-g~~~~~A~~~a~ 243 (279)
T 3rpz_A 223 GMILGMLCC-HEDPKHAVLNAV 243 (279)
T ss_dssp HHHHHHHHH-CSSHHHHHHHHH
T ss_pred HHHHHHHHC-CCCHHHHHHHHH
Confidence 999999999 999999999885
No 66
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.65 E-value=5.6e-16 Score=131.19 Aligned_cols=155 Identities=15% Similarity=0.115 Sum_probs=107.7
Q ss_pred ccEE--EEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccC-CCcEEcCCHHHHHHh
Q 024300 87 YTHL--LTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-VASMLTPNQFEAEQL 163 (269)
Q Consensus 87 ~~~i--~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~-~~dii~pN~~E~~~l 163 (269)
++++ ..|++ +.+..+.+..+++.+++. ++|+|+||+..... . ...+.... +++ .+++|+||..|++.|
T Consensus 57 ~dalvi~~G~~-~~~~~~~~~~~~~~a~~~--~~pvVlDpv~~~~~-~-~~~~~~~~----ll~~~~~vITPN~~E~~~L 127 (265)
T 1v8a_A 57 ADAVVINIGTL-DSGWRRSMVKATEIANEL--GKPIVLDPVGAGAT-K-FRTRVSLE----ILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp CSEEEEECTTC-CHHHHHHHHHHHHHHHHH--TCCEEEECTTBTTB-H-HHHHHHHH----HHHHCCSEEEEEHHHHHHH
T ss_pred CCEEEEEECCC-CHHHHHHHHHHHHHHHHc--CCcEEEcCcccccc-c-cCHHHHHH----HHHhCCcEEcCCHHHHHHH
Confidence 4444 45555 556667788888888887 89999999876320 0 11122222 222 389999999999999
Q ss_pred hCCCC-----C----CHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccCC-CCCCchH
Q 024300 164 TGFRI-----G----SEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPA-YFTGTGD 233 (269)
Q Consensus 164 ~g~~~-----~----~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dt~GaGD 233 (269)
+|... + ..++..++++.|.+.+...|++|+. .+ +++++ ++.+.++...... +++|+||
T Consensus 128 ~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~VvlkG~--~d-~i~~~---------~~~~~~~~g~~~~~~~~GtGD 195 (265)
T 1v8a_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGA--VD-YVSDG---------RRTFAVYNGHELLGRVTGTGC 195 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHHHHTTSEEEEESS--SE-EEECS---------SCEEEECCCCGGGGGSTTHHH
T ss_pred hCCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEcCC--Cc-EEEcC---------CEEEEEcCCCcCcCCccChhH
Confidence 98652 1 2267788899998877777888853 33 44432 2555665544334 8999999
Q ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Q 024300 234 LMTALLLGWSNKYRDNLDIAAELAVSSLQVL 264 (269)
Q Consensus 234 af~a~~~~~l~~~g~~~~~a~~~A~~~~~~~ 264 (269)
+|+|++++.+++ |.+ .+|+..|..+-..+
T Consensus 196 ~Lsg~iaa~lA~-g~~-~~Aa~~a~~~~~~A 224 (265)
T 1v8a_A 196 MVAALTGAFVAV-TEP-LKATTSALVTFGIA 224 (265)
T ss_dssp HHHHHHHHHHTT-SCH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCC-HHHHHHHHHHHHHH
Confidence 999999999999 999 88888887655443
No 67
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.64 E-value=6.6e-15 Score=124.46 Aligned_cols=156 Identities=20% Similarity=0.143 Sum_probs=111.1
Q ss_pred EEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCC
Q 024300 89 HLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI 168 (269)
Q Consensus 89 ~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~ 168 (269)
+|.+|++ +.+..+.+..+++.+++. ++|+|+||+..... . ...+..+.+.+ .++++|+||..|+..|+|...
T Consensus 63 vIn~G~l-~~~~~~~~~~a~~~a~~~--~~PvVlDPVg~gas-~-~r~~~~~~Ll~---~~~~VItpN~~E~~~L~g~~~ 134 (273)
T 3dzv_A 63 VLNLGHL-SQEREQSLLAASDYARQV--NKLTVVDLVGYGAS-D-IRNEVGEKLVH---NQPTVVKGNLSEMRTFCQLVS 134 (273)
T ss_dssp EEECCSC-CHHHHHHHHHHHHHHHHT--TCCEEEECTTTTSC-H-HHHHHHHHHHH---TCCSEEEEEHHHHHHHTTCCC
T ss_pred EEecCCC-ChHHHHHHHHHHHHHHHc--CCcEEEchhhcCCc-c-cCHHHHHHHHh---cCCcEECCCHHHHHHHhCCcc
Confidence 4666775 445677888888889888 89999999887321 1 12233333321 378999999999999999764
Q ss_pred C-----C------HH---HHHHHHHHHHhcCC-CeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCch
Q 024300 169 G-----S------EA---DGREACKILHAAGP-AKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGTG 232 (269)
Q Consensus 169 ~-----~------~~---~~~~a~~~l~~~g~-~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~GaG 232 (269)
. + .+ +..+++++|.+.+. ..|++|+. ..++.++ ++.+.++..+.. ..++|+|
T Consensus 135 ~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~---~D~i~dg---------~~~~~~~~G~~~~~~v~GtG 202 (273)
T 3dzv_A 135 HGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGI---QDVLVSQ---------EQVIVLQNGVPELDCFTGTG 202 (273)
T ss_dssp C-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESS---SEEEECS---------SCEEEECCCCGGGGSSTTHH
T ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECC---eeEEEcC---------CEEEEeCCCCcccCCcCCch
Confidence 2 1 13 56678889987766 88999984 2344432 245555543333 3579999
Q ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHh
Q 024300 233 DLMTALLLGWSNKYRDNLDIAAELAVSSLQVLL 265 (269)
Q Consensus 233 Daf~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l 265 (269)
|+++|++++.+++ |.++.+|+..|..+...+-
T Consensus 203 c~Ls~~Iaa~lA~-g~~~~~Aa~~A~~~~~~Ag 234 (273)
T 3dzv_A 203 DLVGALVAALLGE-GNAPMTAAVAAVSYFNLCG 234 (273)
T ss_dssp HHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999988765543
No 68
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.37 E-value=1.6e-11 Score=113.23 Aligned_cols=157 Identities=16% Similarity=0.062 Sum_probs=105.1
Q ss_pred EEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccC--CCcEEcCCHHHHHHhhCC
Q 024300 89 HLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP--VASMLTPNQFEAEQLTGF 166 (269)
Q Consensus 89 ~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~--~~dii~pN~~E~~~l~g~ 166 (269)
+|.+|++.+ .+.+..+++.+++. ++|+|+||+.... .....+..++ +++ ..++|+||..|+..|+|.
T Consensus 311 vin~G~l~~---~~~~~~a~~~a~~~--~~PvVlDPVg~~a-----~~~r~~~~~~-Ll~~~~~~vItpN~~E~~~L~g~ 379 (540)
T 3nl6_A 311 LLNTGSVAP---PEMLKAAIRAYNDV--KRPIVFDPVGYSA-----TETRLLLNNK-LLTFGQFSCIKGNSSEILGLAEL 379 (540)
T ss_dssp EEESSCSCC---HHHHHHHHHHHHTT--TCCEEEECTTCTT-----SHHHHHHHHH-HTTSCCCSEEEECHHHHHHHTTC
T ss_pred EEeCCCCCH---HHHHHHHHHHHHHc--CCCEEEChHHhhc-----ccccHHHHHH-HHhhCCCeEECCCHHHHHHHhCC
Confidence 355666544 77788888888887 8999999988732 1111122233 666 789999999999999996
Q ss_pred CC------C-----CHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeec--------c-CCCCC-CceEEEEccccC
Q 024300 167 RI------G-----SEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQ--------K-EKGQS-PEQFKIVIPKIP 225 (269)
Q Consensus 167 ~~------~-----~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~--------~-~~~~~-~~~~~~~~~~~~ 225 (269)
.. + +.++..++++.|.+.+...|++|+. ..++.++... . ..... .+.+.++...++
T Consensus 380 ~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlkG~---~D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 456 (540)
T 3nl6_A 380 NKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGE---FDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIE 456 (540)
T ss_dssp --------------CCHHHHHHHHHHHHHTTSEEEECSS---SEEEEECCGGGBCCSSSCCSSCCTTSSCEEEEECSCCG
T ss_pred CcccccccccccccCHHHHHHHHHHHHHHhCCEEEEcCC---CeEEECCCccccccccccccccccCCccEEEECCCChh
Confidence 53 1 1266778889998877788888873 3455554000 0 00000 245556544423
Q ss_pred --CCCCCchHHHHHHHHHhhccCCC---CHHHHHHHHHHH
Q 024300 226 --AYFTGTGDLMTALLLGWSNKYRD---NLDIAAELAVSS 260 (269)
Q Consensus 226 --~dt~GaGDaf~a~~~~~l~~~g~---~~~~a~~~A~~~ 260 (269)
..++|+||+++|.+++.+++ +. ++.+|+..|...
T Consensus 457 ~m~~vtGtGc~Lsg~Iaa~la~-~~~~~~~~~Aa~~a~~~ 495 (540)
T 3nl6_A 457 IMGDITASGCSLGSTIACMIGG-QPSEGNLFHAVVAGVML 495 (540)
T ss_dssp GGGSSTTHHHHHHHHHHHHHHT-CCTTCBHHHHHHHHHHH
T ss_pred hccCccCchHHHHHHHHHHHhc-CcCCCCHHHHHHHHHHH
Confidence 35799999999999999998 87 688888777654
No 69
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=99.37 E-value=6.2e-12 Score=105.48 Aligned_cols=149 Identities=16% Similarity=0.096 Sum_probs=101.1
Q ss_pred EEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCC-
Q 024300 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRI- 168 (269)
Q Consensus 90 i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~- 168 (269)
|.+|.+ +.++.+.+..+.+.+++. ++|+||||+..... . ...+....+ +-.++++|+||..|+..|.|...
T Consensus 62 iNiGtl-~~~~~~~m~~A~~~A~~~--~~PvVLDPVg~gas-~-~R~~~~~~l---l~~~~~vIrgN~sEi~~L~g~~~~ 133 (265)
T 3hpd_A 62 INIGTL-DSGWRRSMVKATEIANEL--GKPIVLDPVGAGAT-K-FRTRVSLEI---LSRGVDVLKGNFGEISALLGEEGK 133 (265)
T ss_dssp EECTTC-CHHHHHHHHHHHHHHHHH--TCCEEEECTTBTTB-H-HHHHHHHHH---HHHCCSEEEEEHHHHHHHHHHHC-
T ss_pred EECCCC-ChHHHHHHHHHHHHHHHc--CCCEEEcCCCCCCc-H-HHHHHHHHH---HhcCCcEEcCCHHHHHHHhcccCC
Confidence 555665 456778888889999998 99999999876321 1 122222222 22378999999999999987432
Q ss_pred --------CCHHHHHHHHHHHHhcCCCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccCC-CCCCchHHHHHHH
Q 024300 169 --------GSEADGREACKILHAAGPAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIPA-YFTGTGDLMTALL 239 (269)
Q Consensus 169 --------~~~~~~~~a~~~l~~~g~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dt~GaGDaf~a~~ 239 (269)
.+.++..++++.+.+.....|++|+. ..++.++ ++.+......... ..+|+||+++|.+
T Consensus 134 ~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlkG~---~d~I~dg---------~~~~~~~~G~~~m~~vtGtGc~Lsg~i 201 (265)
T 3hpd_A 134 TRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGA---VDYVSDG---------RRTFAVYNGHELLGRVTGTGCMVAALT 201 (265)
T ss_dssp ---------CHHHHHHHHHHHHHHTTSEEEEESS---SEEEECS---------SCEEEECCCCGGGGGSTTHHHHHHHHH
T ss_pred CCCccCccccHHHHHHHHHHHHHHhCCEEEEeCC---CeEEEcC---------CEEEEECCCChHhhcCCccchHHHHHH
Confidence 23467778889998877778888873 4455543 2455444322223 4589999999999
Q ss_pred HHhhccCCCCHHHHHHHHHHH
Q 024300 240 LGWSNKYRDNLDIAAELAVSS 260 (269)
Q Consensus 240 ~~~l~~~g~~~~~a~~~A~~~ 260 (269)
.+.+++ + +..+|+..|...
T Consensus 202 aa~lA~-~-~~~~Aa~~a~~~ 220 (265)
T 3hpd_A 202 GAFVAV-T-EPLKATTSALVT 220 (265)
T ss_dssp HHHHTT-S-CHHHHHHHHHHH
T ss_pred HHHHhc-C-ChHHHHHHHHHH
Confidence 999998 7 455666655543
No 70
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=99.29 E-value=1.6e-11 Score=111.48 Aligned_cols=209 Identities=16% Similarity=0.095 Sum_probs=125.5
Q ss_pred CCc-cccCCCCCCCcEEEEecccccCccccccchHHHHhcCCceeeeceEEe-ecCCCC-CCcceeecCHHHHHHHHHHH
Q 024300 3 PPI-LSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQF-SNHTGY-PTFKGQVLNGQQLCDLIEGL 79 (269)
Q Consensus 3 ~~~-~~~~~~~~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~-~~~~g~-~~~~~~~~~~~~~~~~~~~~ 79 (269)
|++ -...||++.|+|+.|+|+ +.++...+....++. |.+...+-+... .....+ +++.. .. . +
T Consensus 224 p~r~~~~~hKg~~G~vlvigGs--~~GA~~laa~aAlr~-GaGlv~~~~~~~~~~~~~~~pe~m~--~~--~-------~ 289 (475)
T 3k5w_A 224 PLRDKKNAHKGDYGHAHVLLGK--HSGAGLLSALSALSF-GSGVVSVQALECEITSNNKPLELVF--CE--N-------F 289 (475)
T ss_dssp CCCCCSSCCGGGGCEEEEEECS--SHHHHHHHHHHHHHT-TCSEEEEEESSSCCSSSSSCTTSEE--ES--S-------C
T ss_pred cCCCCCCCCCCCCCeEEEEeCC--CCcHHHHHHHHHHHh-CCCeEEEeccHHHhhcccCChhhee--eh--h-------h
Confidence 544 578999999999999999 677666666666653 444333322110 001111 12211 10 0 1
Q ss_pred HhCCCccccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHH
Q 024300 80 EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE 159 (269)
Q Consensus 80 ~~~~~~~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E 159 (269)
. -.++++.+|..-.....+ +.+++ +. + |+|+|.-.- +. .+. .+ .++...++|||..|
T Consensus 290 ~----~~~~a~~iGPGlG~~~~~-l~~~l----~~--~-p~VlDADaL-----~~-~~~----~~-~~~~~~VlTPh~~E 346 (475)
T 3k5w_A 290 P----NLLSAFALGMGLENIPKD-FNRWL----EL--A-PCVLDAGVF-----YH-KEI----LQ-ALEKEAVLTPHPKE 346 (475)
T ss_dssp C----SSCSEEEECTTCSSCCTT-HHHHH----HH--S-CEEEEGGGG-----GS-GGG----GT-TTTSSEEEECCHHH
T ss_pred c----cCCCEEEEcCCCCCCHHH-HHHHH----hc--C-CEEEECccc-----CC-chh----hh-ccCCCEEECCCHHH
Confidence 0 136888888643211113 33333 34 6 999997322 11 111 11 44566899999999
Q ss_pred HHHhhCC-----CCCC-HHHHHHHHHHHHhcC-CCeEEEEeeecCCcEEEEeeeccCCCCCCceEEEEccccC-CCCCCc
Q 024300 160 AEQLTGF-----RIGS-EADGREACKILHAAG-PAKVVITSINIDGNLFLIGSHQKEKGQSPEQFKIVIPKIP-AYFTGT 231 (269)
Q Consensus 160 ~~~l~g~-----~~~~-~~~~~~a~~~l~~~g-~~~Vvvt~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dt~Ga 231 (269)
+++|+|. +..+ .++..+++++|.+.+ ...|++|++ ..++.++ ++.+ +.....+ ..++|+
T Consensus 347 ~~rL~g~~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~---~~vI~~~---------~~~~-~~~~g~~~mat~Gt 413 (475)
T 3k5w_A 347 FLSLLNLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGA---NTLIAHQ---------GQVF-INILGSVALAKAGS 413 (475)
T ss_dssp HHHHHHHTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECSS---SEEEEET---------TEEE-EECCCCGGGCSTTH
T ss_pred HHHHhCCccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCC---CCEEECC---------CEEE-EECCCCCCCCCCCH
Confidence 9999986 4433 245567788888776 677888885 2344432 2333 3322233 367999
Q ss_pred hHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Q 024300 232 GDLMTALLLGWSNKYRDNLDIAAELAVSSLQV 263 (269)
Q Consensus 232 GDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~ 263 (269)
||+++|.+++.+++ |.++.+|+..| .+++.
T Consensus 414 GdvLsg~Iaa~lA~-g~~~~~Aa~~a-~~lhg 443 (475)
T 3k5w_A 414 GDVLAGLILSLLSQ-NYTPLDAAINA-SLAHA 443 (475)
T ss_dssp HHHHHHHHHHHHHT-TCCHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHc-CCCHHHHHHHH-HHHHH
Confidence 99999999999999 99999999876 44443
No 71
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=96.61 E-value=0.038 Score=49.72 Aligned_cols=110 Identities=8% Similarity=0.102 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHhCCCccccE-EEEccc--CC--------hhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhh
Q 024300 70 QQLCDLIEGLEANNLLYYTH-LLTGYI--GS--------VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSEL 138 (269)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~-i~~G~l--~~--------~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~ 138 (269)
+++...++.+.+ .+|+ |++|+- .. ....+.+.+.++.++.. +++|-|.-.. +.+++.
T Consensus 224 e~f~~~l~e~~~----~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e~i~~l~~~--~~~iH~E~As------~~~~~l 291 (474)
T 3drw_A 224 EDIKPFLGEIGK----EVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKEK--DVKIHVEFAS------VQDRKL 291 (474)
T ss_dssp TTTGGGHHHHHH----HCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHT--TCEEEEECCC------CSCHHH
T ss_pred HHHHHHHHHhhc----CCCEEEEeccccccccccccccHHHHHHHHHHHHHHhcCC--CCeEEEEeCc------cccHHH
Confidence 444455555532 2564 666653 22 12234444556666544 8999888533 245677
Q ss_pred HHHHHHhccCCCcEEcCCHHHHHHhhCC-----------CCCCHHHHHHHHHHHH-hcCCCeEEE
Q 024300 139 VSVYREKVVPVASMLTPNQFEAEQLTGF-----------RIGSEADGREACKILH-AAGPAKVVI 191 (269)
Q Consensus 139 ~~~~~~~ll~~~dii~pN~~E~~~l~g~-----------~~~~~~~~~~a~~~l~-~~g~~~Vvv 191 (269)
.+.+.+.++|++|.+-.|+.|+..+++. .....+++.++++.|. +.+.+.|.|
T Consensus 292 ~~~i~~~i~p~vDSlGmNEqELa~l~~~lg~~~~s~~~~~~~~i~~v~e~~~~ll~~~~l~rIhv 356 (474)
T 3drw_A 292 RKKIITNILPFVDSVGIDEAEIAQILSVLGYRELADRIFTYNRLEDSILGGMIILDELNFEILQV 356 (474)
T ss_dssp HHHHHHHTGGGSSEEEEEHHHHHHHHHHHTCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHhcccccccccCHHHHHHHHHHhcCCccchhhhcCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 7666656999999999999999998763 1123456667777665 456665543
No 72
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=76.23 E-value=34 Score=30.49 Aligned_cols=106 Identities=9% Similarity=0.024 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHhCCCccccE-EEEccc--CC---hhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHH
Q 024300 70 QQLCDLIEGLEANNLLYYTH-LLTGYI--GS---VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYR 143 (269)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~-i~~G~l--~~---~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~ 143 (269)
+++...++.+.. .+|+ |++|+- .. +...+...+-++.++. +++++-|.-... .+++..+.+.
T Consensus 216 e~f~~~l~e~~~----~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~--~~~~iH~E~As~------~~~~l~~~i~ 283 (457)
T 1l2l_A 216 EEWIERFEEIAK----RSELAIISGLHPLTQENHGKPIKLVREHLKILND--LGIRAHLEFAFT------PDEVVRLEIV 283 (457)
T ss_dssp HHHHHSHHHHHT----TCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHH--TTCEEEEECCCC------SSHHHHHHHH
T ss_pred HHHHHHHHhhcc----CCCEEEEeccccccccchhhhHHHHHHHHHHhcC--CCCeEEEEECCc------ccHHHHHHHH
Confidence 455554444321 3664 677763 23 1212223333444443 388998885332 4567766666
Q ss_pred HhccCCCcEEcCCHHHHHHh---hCCC----------CCCHHHHHHHHHHHH-hcCCCe
Q 024300 144 EKVVPVASMLTPNQFEAEQL---TGFR----------IGSEADGREACKILH-AAGPAK 188 (269)
Q Consensus 144 ~~ll~~~dii~pN~~E~~~l---~g~~----------~~~~~~~~~a~~~l~-~~g~~~ 188 (269)
.++|++|.+-.|+.|+..+ +|.+ ..+..+..+++..|. +.+...
T Consensus 284 -~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~~~~~~v~~v~~~~~~ll~~~~l~r 341 (457)
T 1l2l_A 284 -KLLKHFYSVGLNEVELASVVSVMGEKELAERIISKDPADPIAVIEGLLKLIKETGVKR 341 (457)
T ss_dssp -HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSE
T ss_pred -hhccccccCccCHHHHHHHHHHcCCcccccccccCCccCHHHHHHHHHHHHHhcCCCe
Confidence 5999999999999999885 3311 012455556666665 446554
No 73
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=75.74 E-value=19 Score=32.17 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=56.9
Q ss_pred ccE-EEEcc--cCCh---hhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHH
Q 024300 87 YTH-LLTGY--IGSV---SFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEA 160 (269)
Q Consensus 87 ~~~-i~~G~--l~~~---~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~ 160 (269)
+|+ +++|+ +... +..+...+-++.++. +++++-|+.... .+++..+.+. .+++++|.+-.|+.|+
T Consensus 226 ~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~--~~~~iH~ElAs~------~~~~~~~~i~-~ilp~vDSlGmNE~EL 296 (455)
T 1ua4_A 226 VQLAILSGLQALTKENYKEPFEIVKSNLEVLNE--REIPVHLEFAFT------PDEKVREEIL-NVLGMFYSVGLNEVEL 296 (455)
T ss_dssp CSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHH--TTCCEEEECCCC------CCHHHHHHHH-HHGGGCSEEEECHHHH
T ss_pred CcEEEEechhcccccchHHHHHHHHHHHHHhcC--CCceEEEEeCCc------cCHHHHHHHH-hhhccCcccccCHHHH
Confidence 665 56665 3332 223333333334433 488999997433 4556656666 5999999999999999
Q ss_pred HHhhCC--------C--C---CCHHHHHHHHHHHH-hcCCCeEE
Q 024300 161 EQLTGF--------R--I---GSEADGREACKILH-AAGPAKVV 190 (269)
Q Consensus 161 ~~l~g~--------~--~---~~~~~~~~a~~~l~-~~g~~~Vv 190 (269)
..+++. . . .+..+..+++..+. +.+...|.
T Consensus 297 ~~l~~~lg~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~l~rih 340 (455)
T 1ua4_A 297 ASIMEILGEKKLAKELLAHDPVDPIAVTEAMLKLAKKTGVKRIH 340 (455)
T ss_dssp HHHHHHTTCHHHHHHTTSSSSCCHHHHHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHhCCCccccccccCCccCHHHHHHHHHHHHHHcCCCEEE
Confidence 887543 1 1 12566666666665 44655443
No 74
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=68.79 E-value=14 Score=33.13 Aligned_cols=109 Identities=12% Similarity=0.154 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhCCCccccE-EEEcc--cCC----hh-hHHHHHHHHHHHHh-cCCCceEEEccccccCCCccCChhhHH
Q 024300 70 QQLCDLIEGLEANNLLYYTH-LLTGY--IGS----VS-FLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVS 140 (269)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~-i~~G~--l~~----~~-~~~~i~~~l~~~k~-~~~~~~vv~Dp~~~~~~~~~~~~~~~~ 140 (269)
+++...++.+.. .+|+ |++|+ +.. ++ ..+.+.++.+.++. .++++++-|.-... .+++..+
T Consensus 221 e~f~~~l~e~~~----~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~~~~~~iH~E~As~------~~~~l~~ 290 (467)
T 1gc5_A 221 REFREGFEEITR----NVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFAYT------ANRRVRE 290 (467)
T ss_dssp HHHHHSHHHHHT----TCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCC------CCHHHHH
T ss_pred HHHHHHHHhhcc----CCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhcCCCCeEEEEECCc------ccHHHHH
Confidence 455554444321 3664 66665 222 23 33344444444433 34588998885332 4567776
Q ss_pred HHHHhccCCCcEEcCCHHHHHHhh---CCCC-------CCHHHHHHHHHHHH-hcCCCeE
Q 024300 141 VYREKVVPVASMLTPNQFEAEQLT---GFRI-------GSEADGREACKILH-AAGPAKV 189 (269)
Q Consensus 141 ~~~~~ll~~~dii~pN~~E~~~l~---g~~~-------~~~~~~~~a~~~l~-~~g~~~V 189 (269)
.+. .++|++|.+-.|+.|+..++ |.+. .+..+..+++..+. +.+...|
T Consensus 291 ~i~-~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~p~v~~v~~~~~~ll~~~~l~rI 349 (467)
T 1gc5_A 291 ALV-ELLPKFTSVGLNEVELASIMEIIGDEELAKEVLEGHIFSVIDAMNVLMDETGIERI 349 (467)
T ss_dssp HHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHHHHHHHHCCSEE
T ss_pred HHH-hhccccccCccCHHHHHHHHHHcCCCcccccccCCCHHHHHHHHHHHHHhcCCCeE
Confidence 677 59999999999999998544 3220 11445555556654 3455543
No 75
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=65.50 E-value=65 Score=27.95 Aligned_cols=108 Identities=10% Similarity=0.092 Sum_probs=64.7
Q ss_pred CHHHHHHHHHHHHhCCCccccEEEEcccCC--------hhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhH
Q 024300 68 NGQQLCDLIEGLEANNLLYYTHLLTGYIGS--------VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELV 139 (269)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~i~~G~l~~--------~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~ 139 (269)
+.+...++.+.+++.. +++|+.+..-+ +...+-+..+.+.+++. |++++.+| ++.+..
T Consensus 154 s~e~a~~~a~~~k~aG---a~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~---------~d~~~~ 219 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKG---LKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEI---------VTPADI 219 (385)
T ss_dssp CHHHHHHHHHHHHHTT---CCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEEC---------CSGGGH
T ss_pred CHHHHHHHHHHHHHcC---CCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEec---------CCHHHH
Confidence 4455556666666543 57777765321 01134445555566666 99999998 444444
Q ss_pred HHHHHhccCCCcEEcCCHHH------HHHhh--CCC------C-CCHHHHHHHHHHHHhcCCCeEEEEe
Q 024300 140 SVYREKVVPVASMLTPNQFE------AEQLT--GFR------I-GSEADGREACKILHAAGPAKVVITS 193 (269)
Q Consensus 140 ~~~~~~ll~~~dii~pN~~E------~~~l~--g~~------~-~~~~~~~~a~~~l~~~g~~~Vvvt~ 193 (269)
+. +..++|+++..-.+ +..+. |.+ . .+.+++..+++.+.+.|.+.+++..
T Consensus 220 ~~----l~~~vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~ 284 (385)
T 3nvt_A 220 EV----ALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCE 284 (385)
T ss_dssp HH----HTTTCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred HH----HHhhCCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 43 33458888644433 22222 322 1 5678999999999988887776664
No 76
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=58.72 E-value=73 Score=25.94 Aligned_cols=107 Identities=13% Similarity=0.144 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHhCCCccccEEEEcccCChhh--------HHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHH
Q 024300 69 GQQLCDLIEGLEANNLLYYTHLLTGYIGSVSF--------LNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVS 140 (269)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~i~~G~l~~~~~--------~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~ 140 (269)
.+...++.+.+++.. +++|+.++.-+... .+-+..+.+.+++. ++|++-+| ++.+..+
T Consensus 36 ~e~a~~~a~~l~~~G---a~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~---------~d~~~~~ 101 (262)
T 1zco_A 36 REQIMKVAEFLAEVG---IKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEV---------MDTRHVE 101 (262)
T ss_dssp HHHHHHHHHHHHHTT---CCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEEC---------CCGGGHH
T ss_pred HHHHHHHHHHHHHcC---CCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEee---------CCHHhHH
Confidence 455555666666543 56777776431111 33444455556666 99999887 4444444
Q ss_pred HHHHhccCCCcEEcCCHHHH------HHh--hCCCC------C-CHHHHHHHHHHHHhcCCCeEEEEe
Q 024300 141 VYREKVVPVASMLTPNQFEA------EQL--TGFRI------G-SEADGREACKILHAAGPAKVVITS 193 (269)
Q Consensus 141 ~~~~~ll~~~dii~pN~~E~------~~l--~g~~~------~-~~~~~~~a~~~l~~~g~~~Vvvt~ 193 (269)
.+.+ .+|+++..-.+. ..+ ++.++ . +.+++..++..+...|.+.+++..
T Consensus 102 ~l~~----~vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~ 165 (262)
T 1zco_A 102 LVAK----YSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCE 165 (262)
T ss_dssp HHHH----HCSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred HHHh----hCCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 4443 367775443332 222 23332 3 688999999999888887776654
No 77
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=57.70 E-value=67 Score=25.95 Aligned_cols=118 Identities=12% Similarity=0.137 Sum_probs=65.4
Q ss_pred CCCCcEEEEecccccCccccccchHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCCccccEEE
Q 024300 12 SETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (269)
Q Consensus 12 ~~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 91 (269)
+..++||....-.-..-+|..-....|+..|+++..+-.. ++.+++.+..... .+++|.
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~---------------vp~e~l~~~~~~~------~~d~V~ 179 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD---------------VPAEEVLAAVQKE------KPIMLT 179 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE---------------CCSHHHHHHHHHH------CCSEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC---------------CCHHHHHHHHHHc------CCCEEE
Confidence 4456676665544444455544555678888876654432 3334554443332 267666
Q ss_pred EcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhh
Q 024300 92 TGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (269)
Q Consensus 92 ~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~ 164 (269)
+..+.. .....+.++++.+++..++++|++=-.. ..++.. + -+ .+|+..++..|+-.+.
T Consensus 180 lS~l~~-~~~~~~~~~i~~l~~~~~~~~v~vGG~~-------~~~~~~----~-~i-gad~~~~da~~av~~~ 238 (258)
T 2i2x_B 180 GTALMT-TTMYAFKEVNDMLLENGIKIPFACGGGA-------VNQDFV----S-QF-ALGVYGEEAADAPKIA 238 (258)
T ss_dssp EECCCT-TTTTHHHHHHHHHHTTTCCCCEEEESTT-------CCHHHH----H-TS-TTEEECSSTTHHHHHH
T ss_pred EEeecc-CCHHHHHHHHHHHHhcCCCCcEEEECcc-------CCHHHH----H-Hc-CCeEEECCHHHHHHHH
Confidence 655433 3345577788888877445666554211 223321 2 12 5788888887766554
No 78
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=57.29 E-value=65 Score=24.92 Aligned_cols=118 Identities=9% Similarity=0.127 Sum_probs=64.5
Q ss_pred CCCCcEEEEecccccCccccccchHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCCccccEEE
Q 024300 12 SETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (269)
Q Consensus 12 ~~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 91 (269)
.+.++||....-.-..-+|..-....|+..|+++..+-. .++.+++.+..... .+++|.
T Consensus 86 ~~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~---------------~vp~~~l~~~~~~~------~~d~v~ 144 (210)
T 1y80_A 86 PSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGV---------------DIEPGKFVEAVKKY------QPDIVG 144 (210)
T ss_dssp CCCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCS---------------SBCHHHHHHHHHHH------CCSEEE
T ss_pred CCCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCC---------------CCCHHHHHHHHHHc------CCCEEE
Confidence 345566666544334445554455567888877554331 23445554444333 267766
Q ss_pred EcccCChhhHHHHHHHHHHHHhcC--CCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhh
Q 024300 92 TGYIGSVSFLNTILQVVEKLRSIN--PNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (269)
Q Consensus 92 ~G~l~~~~~~~~i~~~l~~~k~~~--~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~ 164 (269)
+..+.. .....+.++++.+++.. ++++|++=-. . ..++..+ + + .+|...++..|+-.+.
T Consensus 145 lS~~~~-~~~~~~~~~i~~l~~~~~~~~~~v~vGG~------~-~~~~~~~---~-~--gad~~~~da~~av~~~ 205 (210)
T 1y80_A 145 MSALLT-TTMMNMKSTIDALIAAGLRDRVKVIVGGA------P-LSQDFAD---E-I--GADGYAPDAASATELC 205 (210)
T ss_dssp EECCSG-GGTHHHHHHHHHHHHTTCGGGCEEEEEST------T-CCHHHHH---H-H--TCSEECSSHHHHHHHH
T ss_pred Eecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEECC------C-CCHHHHH---H-c--CCeEEECCHHHHHHHH
Confidence 655433 34566777888887752 2367665421 1 2333221 1 2 5788888888776543
No 79
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=56.70 E-value=71 Score=27.74 Aligned_cols=77 Identities=16% Similarity=0.214 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHH------HHHh--hCCC------C
Q 024300 103 TILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE------AEQL--TGFR------I 168 (269)
Q Consensus 103 ~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E------~~~l--~g~~------~ 168 (269)
....+.+.+++. +++++-.| ++.+.++.+.+ + .+|+++.--.| ++.+ +|.+ .
T Consensus 102 ~~~~L~~~~~~~--Gi~~~stp---------fD~~svd~l~~-~--~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGm 167 (385)
T 1vli_A 102 WILPLLDYCREK--QVIFLSTV---------CDEGSADLLQS-T--SPSAFKIASYEINHLPLLKYVARLNRPMIFSTAG 167 (385)
T ss_dssp GHHHHHHHHHHT--TCEEECBC---------CSHHHHHHHHT-T--CCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTT
T ss_pred HHHHHHHHHHHc--CCcEEEcc---------CCHHHHHHHHh-c--CCCEEEECcccccCHHHHHHHHhcCCeEEEECCC
Confidence 345566777777 99998887 55555554433 2 26777543333 2333 2333 2
Q ss_pred CCHHHHHHHHHHHHhcCCCeEEEEe
Q 024300 169 GSEADGREACKILHAAGPAKVVITS 193 (269)
Q Consensus 169 ~~~~~~~~a~~~l~~~g~~~Vvvt~ 193 (269)
.+.++++.+++.+.+.|.+.|++-.
T Consensus 168 aTl~Ei~~Ave~i~~~Gn~~iiLlh 192 (385)
T 1vli_A 168 AEISDVHEAWRTIRAEGNNQIAIMH 192 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCcEEEEe
Confidence 5789999999999988886666654
No 80
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=56.42 E-value=30 Score=28.17 Aligned_cols=130 Identities=12% Similarity=0.052 Sum_probs=74.3
Q ss_pred CCCCCCcceeecCHHHHHHHHHHHHhCCCccccEEEEcccCCh-hhHHHHHHHHHHHHhcCCCceEEEccccc----cCC
Q 024300 56 HTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSV-SFLNTILQVVEKLRSINPNLIYVCDPVMG----DEG 130 (269)
Q Consensus 56 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~l~~~-~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~----~~~ 130 (269)
+.|.+.+...-+....++++++.... +.|.++.|...+. .+.+.+.+.++.+|++ ++++..--.+. ..+
T Consensus 12 ~~GlT~v~dkglg~~~~~d~Le~~g~----yID~lKfg~Gt~~l~~~~~l~eki~l~~~~--gV~v~~GGTl~E~~~~qg 85 (251)
T 1qwg_A 12 QRGLTVVLDKGLPPKFVEDYLKVCGD----YIDFVKFGWGTSAVIDRDVVKEKINYYKDW--GIKVYPGGTLFEYAYSKG 85 (251)
T ss_dssp CCCCEEEEESSCCHHHHHHHHHHHGG----GCSEEEECTTGGGGSCHHHHHHHHHHHHTT--TCEEEECHHHHHHHHHTT
T ss_pred ccCeeEEecCCCCHHHHHHHHHHhhh----hcceEEecCceeeecCHHHHHHHHHHHHHc--CCeEECCcHHHHHHHHcC
Confidence 34555543444677888888877664 5789999965432 2356788999999998 98887663211 011
Q ss_pred CccCChhhHHHHHHhccCCC----cEEcCCHHHHHHhh--------------CCCC------CCHHHHHHHHHHHHhcCC
Q 024300 131 KLYVPSELVSVYREKVVPVA----SMLTPNQFEAEQLT--------------GFRI------GSEADGREACKILHAAGP 186 (269)
Q Consensus 131 ~~~~~~~~~~~~~~~ll~~~----dii~pN~~E~~~l~--------------g~~~------~~~~~~~~a~~~l~~~g~ 186 (269)
.-+++++..++.=+..+ -.+..+.++...+. |... .+.+...+.++..++.|.
T Consensus 86 ---~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA 162 (251)
T 1qwg_A 86 ---KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGA 162 (251)
T ss_dssp ---CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTC
T ss_pred ---cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCCC
Confidence 11233333333111111 12344555555442 2211 234455566666677898
Q ss_pred CeEEEEee
Q 024300 187 AKVVITSI 194 (269)
Q Consensus 187 ~~Vvvt~g 194 (269)
..|++=..
T Consensus 163 ~~ViiEar 170 (251)
T 1qwg_A 163 DYVIIEGR 170 (251)
T ss_dssp SEEEECCT
T ss_pred cEEEEeee
Confidence 88888764
No 81
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=56.29 E-value=21 Score=28.47 Aligned_cols=107 Identities=20% Similarity=0.198 Sum_probs=61.8
Q ss_pred CcEEEEecccccCcccccc----chHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCCcccc-E
Q 024300 15 GRVLSIQSHTVQGYVGNKS----AVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYT-H 89 (269)
Q Consensus 15 ~~vl~i~g~~~~g~~G~~a----~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 89 (269)
+||+.|+|-...+.+...+ +..-++.+.+.+++++-+ -++++.+.++.+.... +.. .
T Consensus 88 krvii~gggaqv~qva~gai~eadrhnirgerisvdt~p~v----------------ge~~l~~av~av~~lp--r~~~l 149 (223)
T 1y7p_A 88 KRVIILGGGALVSQVAIGAISEADRHNLRGERISVDTMPVV----------------GEEEIAEAVKAVSRLH--RAEVL 149 (223)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHTSCCEEEEEEECC----------------SHHHHHHHHHHGGGST--TEEEE
T ss_pred cEEEEECCcHHHHHHHHhhcchhhhcccccceeeeecceec----------------CHHHHHHHHHHHhhcc--cccee
Confidence 5777777754444333333 444566666666655532 1355555555665432 233 3
Q ss_pred EEEcccCChhhHHHHHHHHHHHHhcCCCceEE-EccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHh
Q 024300 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYV-CDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQL 163 (269)
Q Consensus 90 i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv-~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l 163 (269)
++.|++.... +.+.++++|+. ++||+ ++ +..+ +-..+|++.-+.-.+..|
T Consensus 150 vlags~mgg~----i~~~v~~~~~~--~i~vi~l~--m~gs----------------v~~~~dlvv~dp~qag~~ 200 (223)
T 1y7p_A 150 VLAGGIMGGK----ITEEVKKLRKS--GIRVISLS--MFGS----------------VPDVADVVISDPVMAGTL 200 (223)
T ss_dssp EEESSBCCTH----HHHHHHHHGGG--TCEEEEES--CBSS----------------HHHHSSEEESSHHHHHHH
T ss_pred eEecccccch----HHHHHHHHHHC--CCeEEEec--CCCC----------------ccccccEEecCchhhhHH
Confidence 7888887544 45667889988 88876 44 2211 223677777776666554
No 82
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=55.35 E-value=99 Score=26.42 Aligned_cols=107 Identities=10% Similarity=0.029 Sum_probs=62.8
Q ss_pred CHHHHHHHHHHHHhCCCccccEEEEcccCChh--------hHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhH
Q 024300 68 NGQQLCDLIEGLEANNLLYYTHLLTGYIGSVS--------FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELV 139 (269)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~i~~G~l~~~~--------~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~ 139 (269)
+.+...+..+.+++.. .+++..+..-+.. ..+-+..+.+.+++. +++++-+| ++.+..
T Consensus 118 s~e~a~~~a~~~k~aG---a~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~--Gl~~~te~---------~d~~~~ 183 (350)
T 1vr6_A 118 GREMLMETAHFLSELG---VKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--GMYVVTEA---------LGEDDL 183 (350)
T ss_dssp CHHHHHHHHHHHHHTT---CCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEEC---------SSGGGH
T ss_pred CHHHHHHHHHHHHHcC---CCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc--CCcEEEEe---------CCHHHH
Confidence 4455556666666543 4666665443211 124444455556666 99999887 444545
Q ss_pred HHHHHhccCCCcEEcC------CHHHHHHhh--CCCC------C-CHHHHHHHHHHHHhcCCCeEEEE
Q 024300 140 SVYREKVVPVASMLTP------NQFEAEQLT--GFRI------G-SEADGREACKILHAAGPAKVVIT 192 (269)
Q Consensus 140 ~~~~~~ll~~~dii~p------N~~E~~~l~--g~~~------~-~~~~~~~a~~~l~~~g~~~Vvvt 192 (269)
+.+.+ ++|+++. |..=+..+. +.++ . +.+++..+++.+...|.+.+++.
T Consensus 184 ~~l~~----~vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLc 247 (350)
T 1vr6_A 184 PKVAE----YADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILC 247 (350)
T ss_dssp HHHHH----HCSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHH----hCCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEE
Confidence 54443 3566643 333233332 3332 3 67899999999998898787775
No 83
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=53.95 E-value=71 Score=26.49 Aligned_cols=57 Identities=9% Similarity=0.033 Sum_probs=40.1
Q ss_pred cCHHHHHHHHHHHHhCCCccccEEEEcccCCh--hhHHHHHHHHHHHHhcCCCceEEEccccc
Q 024300 67 LNGQQLCDLIEGLEANNLLYYTHLLTGYIGSV--SFLNTILQVVEKLRSINPNLIYVCDPVMG 127 (269)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~i~~G~l~~~--~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~ 127 (269)
.+.++++.+.+++....-..+|+|.+|.|... ...+.+.++++.++ +.+++|-+...
T Consensus 105 Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~----~l~vTFHRAFD 163 (287)
T 3iwp_A 105 YSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR----PLPVTFHRAFD 163 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT----TSCEEECGGGG
T ss_pred cCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC----CCcEEEECchh
Confidence 45677777777766443335789999988654 45677888888774 57888887543
No 84
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=53.80 E-value=20 Score=29.53 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=43.7
Q ss_pred CCCCCcceeecCHHHHHHHHHHHHhCCCccccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEcc
Q 024300 57 TGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDP 124 (269)
Q Consensus 57 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp 124 (269)
.|++.+...-+....++++++.... +.|.++.|...+....+ +.+.++.++++ ++++..--
T Consensus 40 ~GlT~v~Dkglg~~~~~DlLe~ag~----yID~lKfg~GTs~l~~~-l~ekI~l~~~~--gV~v~~GG 100 (276)
T 1u83_A 40 TGQSILIDNGYPLQFFKDAIAGASD----YIDFVKFGWGTSLLTKD-LEEKISTLKEH--DITFFFGG 100 (276)
T ss_dssp SSCEEEEESSCCHHHHHHHHHHHGG----GCCEEEECTTGGGGCTT-HHHHHHHHHHT--TCEEEECH
T ss_pred cCceEEecCCCCHHHHHHHHHHhhh----hcceEEecCcchhhhHH-HHHHHHHHHHc--CCeEeCCc
Confidence 4555544445777888888877665 57899999655433334 88899999998 98887764
No 85
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=52.58 E-value=47 Score=27.56 Aligned_cols=49 Identities=12% Similarity=0.040 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhCCCccccEEEEcccCChhh--HHHHHHHHHHHHhcCCCceEEE-cc
Q 024300 70 QQLCDLIEGLEANNLLYYTHLLTGYIGSVSF--LNTILQVVEKLRSINPNLIYVC-DP 124 (269)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~i~~G~l~~~~~--~~~i~~~l~~~k~~~~~~~vv~-Dp 124 (269)
++..+.++.+.+. ..|+|++|+ .... .+.+.++++.+|+.. ++|+|+ -|
T Consensus 53 ~~~~~~~~~~~~s---GtDai~VGS--~~vt~~~~~~~~~v~~ik~~~-~lPvil~fP 104 (286)
T 3vk5_A 53 TEAVEKAAELTRL---GFAAVLLAS--TDYESFESHMEPYVAAVKAAT-PLPVVLHFP 104 (286)
T ss_dssp HHHHHHHHHHHHT---TCSCEEEEC--SCCSSHHHHHHHHHHHHHHHC-SSCEEEECC
T ss_pred HHHHHHHHHHHhc---CCCEEEEcc--CCCCcchHHHHHHHHHHHHhC-CCCEEEECC
Confidence 4444455555443 368899994 3233 566778888888832 899999 77
No 86
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=50.22 E-value=1.1e+02 Score=25.35 Aligned_cols=63 Identities=14% Similarity=0.104 Sum_probs=39.4
Q ss_pred ccEEEEcccC---C-hhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccC-----CCcEEcCCH
Q 024300 87 YTHLLTGYIG---S-VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP-----VASMLTPNQ 157 (269)
Q Consensus 87 ~~~i~~G~l~---~-~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~-----~~dii~pN~ 157 (269)
..++++|+-. . ..-...+.++++.++++ +.+|++|.-..+ +........+. ++. .+|.++.|.
T Consensus 63 v~~~Kvg~~lf~~~G~~G~~~l~~~i~~l~~~--g~~VflDlK~~D-----IpnTv~~ya~~-~~~~~~~lg~D~vTvh~ 134 (284)
T 3l52_A 63 VAVFKPQSAFFERFGSRGVAVLEKTVAEARAA--GALVVMDAKRGD-----IGSTMAAYAEA-FLRKDSPLFSDALTVSP 134 (284)
T ss_dssp CSEEEEBHHHHHTTHHHHHHHHHHHHHHHHHT--TCEEEEEEEECC-----CHHHHHHHHHH-HSSTTSTTCCSEEEECC
T ss_pred ceEEEeeHHHHHhcCHHHHHHHHHHHHHHHHC--CCcEEEEecccC-----cHHHHHHHHHH-HhccccccCCcEEEEec
Confidence 5678998521 1 12245677788999988 899999986554 32233332332 442 478888764
No 87
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=46.94 E-value=15 Score=32.75 Aligned_cols=20 Identities=20% Similarity=0.290 Sum_probs=16.9
Q ss_pred CCCCCchHHH-HHHHHHhhcc
Q 024300 226 AYFTGTGDLM-TALLLGWSNK 245 (269)
Q Consensus 226 ~dt~GaGDaf-~a~~~~~l~~ 245 (269)
..|+|-||+| +++|++.|+.
T Consensus 433 ~~TVGlGDtiSa~gf~~~l~~ 453 (455)
T 1ua4_A 433 KSTVGIGDTISSSAFIGEFSF 453 (455)
T ss_dssp SCCTTHHHHHHHHHHHHHHHT
T ss_pred CceecCCcchhhHHHHHHHHh
Confidence 5789999999 5699988864
No 88
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=46.57 E-value=15 Score=32.89 Aligned_cols=20 Identities=15% Similarity=0.194 Sum_probs=16.7
Q ss_pred CCCCCchHHH-HHHHHHhhcc
Q 024300 226 AYFTGTGDLM-TALLLGWSNK 245 (269)
Q Consensus 226 ~dt~GaGDaf-~a~~~~~l~~ 245 (269)
..|+|.||+| +|||++.++.
T Consensus 444 ~~TVGLGDtISa~gfv~~l~~ 464 (467)
T 1gc5_A 444 KSTVGIGDTISSSAFVSEFGM 464 (467)
T ss_dssp SCCSSHHHHHHHHHHHHHHHH
T ss_pred CceecCCcchhhHHHHHHHHH
Confidence 5789999999 5699988764
No 89
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=44.77 E-value=1.3e+02 Score=24.69 Aligned_cols=107 Identities=16% Similarity=0.104 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHhCCCccccEEEEcccCChh--------hHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHH
Q 024300 69 GQQLCDLIEGLEANNLLYYTHLLTGYIGSVS--------FLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVS 140 (269)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~i~~G~l~~~~--------~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~ 140 (269)
.+...+..+.+++.. .++++.+..-+.. ..+-+..+.+.+++. |++++-+| ++.+..+
T Consensus 51 ~e~a~~~a~~~k~~g---a~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~--Gl~~~te~---------~d~~~~~ 116 (276)
T 1vs1_A 51 WEQVREAALAVKEAG---AHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEA--GLPVVTEV---------LDPRHVE 116 (276)
T ss_dssp HHHHHHHHHHHHHHT---CSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCCEEEEC---------CCGGGHH
T ss_pred HHHHHHHHHHHHHhC---CCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHc--CCcEEEec---------CCHHHHH
Confidence 345555555555432 4556555432211 133444455556666 99999887 4445555
Q ss_pred HHHHhccCCCcEEcC------CHHHHHHh--hCCCC------C-CHHHHHHHHHHHHhcCCCeEEEEe
Q 024300 141 VYREKVVPVASMLTP------NQFEAEQL--TGFRI------G-SEADGREACKILHAAGPAKVVITS 193 (269)
Q Consensus 141 ~~~~~ll~~~dii~p------N~~E~~~l--~g~~~------~-~~~~~~~a~~~l~~~g~~~Vvvt~ 193 (269)
.+.+ .+|+++. |..=+..+ +|.++ . +.++++.+++.+...|.+.+++..
T Consensus 117 ~l~~----~vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~ 180 (276)
T 1vs1_A 117 TVSR----YADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVE 180 (276)
T ss_dssp HHHH----HCSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHH----hCCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 4444 2566643 33222222 24432 3 678999999999988887777765
No 90
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=44.01 E-value=14 Score=32.90 Aligned_cols=19 Identities=16% Similarity=0.237 Sum_probs=12.9
Q ss_pred CCCCCchHHH-HHHHHHhhc
Q 024300 226 AYFTGTGDLM-TALLLGWSN 244 (269)
Q Consensus 226 ~dt~GaGDaf-~a~~~~~l~ 244 (269)
..|+|.||+| +|||++.++
T Consensus 436 ~~TVGLGDtISa~gfv~~l~ 455 (457)
T 1l2l_A 436 KSTVGIGDTISSSAFVSEFS 455 (457)
T ss_dssp ----CTTHHHHHHHHHHHHH
T ss_pred CceecCCcchhhHHHHHHHh
Confidence 5789999999 569988875
No 91
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=39.39 E-value=1.7e+02 Score=25.42 Aligned_cols=94 Identities=19% Similarity=0.142 Sum_probs=51.0
Q ss_pred CCcEEEEecccccCccccccchHHHHhcCCceeeeceEEe--e--cCCCCCCcceeecCHHHHHHHHHHHHhCCCccccE
Q 024300 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQF--S--NHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTH 89 (269)
Q Consensus 14 ~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~--~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (269)
..+|+.++ +|.+|. ...+.|...|+++..+....- . ...|+..+.|...+.+.+.+. .+. .+++
T Consensus 4 ~~~viIiG----~Gr~G~-~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~a--gi~-----~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAG----FGRFGQ-ITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESA--GAA-----KAEV 71 (413)
T ss_dssp CCSEEEEC----CSHHHH-HHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHT--TTT-----TCSE
T ss_pred CCeEEEEC----CCHHHH-HHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhc--CCC-----ccCE
Confidence 34566664 366665 346778889998887754321 0 123555555554443333222 233 3566
Q ss_pred EEEcccCChhhHHHHHHHHHHHHhcCCCceEEEc
Q 024300 90 LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCD 123 (269)
Q Consensus 90 i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~D 123 (269)
+++.. ++ .+....++..+|+.+|+++|+.=
T Consensus 72 viv~~-~~---~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 72 LINAI-DD---PQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp EEECC-SS---HHHHHHHHHHHHHHCTTCEEEEE
T ss_pred EEECC-CC---hHHHHHHHHHHHHhCCCCeEEEE
Confidence 66544 22 23344556667776667777654
No 92
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=38.17 E-value=1.7e+02 Score=24.23 Aligned_cols=88 Identities=17% Similarity=0.134 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHHHHhcCCCceEEEccccccCC--CccCC-hhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCCCCHHHHH
Q 024300 99 SFLNTILQVVEKLRSINPNLIYVCDPVMGDEG--KLYVP-SELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGR 175 (269)
Q Consensus 99 ~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~--~~~~~-~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~~~~~~~~ 175 (269)
+..+.+.++.+.++++ ++|+++++.++... ..... +...+..+...--.+|+++.+..... ++ +.+++.
T Consensus 139 ~~~~~i~~v~~~~~~~--G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~~--~g----~~~~~~ 210 (304)
T 1to3_A 139 QRLNMVKEFNELCHSN--GLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLYG--KG----ARSDLL 210 (304)
T ss_dssp HHHHHHHHHHHHHHTT--TCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGGG--CS----CHHHHH
T ss_pred HHHHHHHHHHHHHHHc--CCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcCC--CC----CHHHHH
Confidence 3456788889999998 99999997655221 00011 11223344322236899876553110 11 334555
Q ss_pred HHHHHHHhc-CCCeEEEEee
Q 024300 176 EACKILHAA-GPAKVVITSI 194 (269)
Q Consensus 176 ~a~~~l~~~-g~~~Vvvt~g 194 (269)
+..+.+... +...|++.+|
T Consensus 211 ~vv~~~~~~~~~P~Vv~aGG 230 (304)
T 1to3_A 211 TASQRLNGHINMPWVILSSG 230 (304)
T ss_dssp HHHHHHHHTCCSCEEECCTT
T ss_pred HHHHhccccCCCCeEEEecC
Confidence 555544442 3444777776
No 93
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=36.54 E-value=1.6e+02 Score=25.11 Aligned_cols=76 Identities=11% Similarity=0.180 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcC------CHHHHHHhh--CCC------
Q 024300 102 NTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTP------NQFEAEQLT--GFR------ 167 (269)
Q Consensus 102 ~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~p------N~~E~~~l~--g~~------ 167 (269)
+....+.+.+++. |++++..| ++.+.++.+.+ + .+|+++. |..=++.+. |.+
T Consensus 78 e~~~~L~~~~~~~--Gi~~~st~---------fD~~svd~l~~-~--~v~~~KI~S~~~~N~pLL~~va~~gKPviLstG 143 (350)
T 3g8r_A 78 EQMQKLVAEMKAN--GFKAICTP---------FDEESVDLIEA-H--GIEIIKIASCSFTDWPLLERIARSDKPVVASTA 143 (350)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEE---------CSHHHHHHHHH-T--TCCEEEECSSSTTCHHHHHHHHTSCSCEEEECT
T ss_pred HHHHHHHHHHHHc--CCcEEecc---------CCHHHHHHHHH-c--CCCEEEECcccccCHHHHHHHHhhCCcEEEECC
Confidence 3445566777777 99998887 55555555543 2 2666643 222222222 322
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEE
Q 024300 168 IGSEADGREACKILHAAGPAKVVI 191 (269)
Q Consensus 168 ~~~~~~~~~a~~~l~~~g~~~Vvv 191 (269)
..+.++++.+++.+.+.|.+.+++
T Consensus 144 mstl~Ei~~Ave~i~~~g~~viLl 167 (350)
T 3g8r_A 144 GARREDIDKVVSFMLHRGKDLTIM 167 (350)
T ss_dssp TCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE
Confidence 257899999999998877654443
No 94
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=36.45 E-value=35 Score=23.88 Aligned_cols=31 Identities=19% Similarity=-0.010 Sum_probs=26.6
Q ss_pred CCCCCchHHHHHHHHHhhccCC-CCHHHHHHHH
Q 024300 226 AYFTGTGDLMTALLLGWSNKYR-DNLDIAAELA 257 (269)
Q Consensus 226 ~dt~GaGDaf~a~~~~~l~~~g-~~~~~a~~~A 257 (269)
+|.+|-||.--|.|++++.+ | .+.+||+..-
T Consensus 64 ~DKh~kGd~aEA~iAyAWle-G~is~eEaveil 95 (133)
T 1ztd_A 64 VDKHAKGDYAEALIAKAWLM-GLISEREAVEII 95 (133)
T ss_dssp GGTTCHHHHHHHHHHHHHHT-TSSCHHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHHh-ccccHHHHHHHH
Confidence 58899999999999999998 6 6888887753
No 95
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=36.34 E-value=2e+02 Score=24.48 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHH------HHHh--hCCC------
Q 024300 102 NTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFE------AEQL--TGFR------ 167 (269)
Q Consensus 102 ~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E------~~~l--~g~~------ 167 (269)
+-...+.+.+++. +++++-.| ++.+.++.+.+ + .+|+++.--.| ++.+ +|.+
T Consensus 91 e~~~~L~~~~~~~--Gi~~~st~---------~d~~svd~l~~-~--~v~~~KI~S~~~~n~~LL~~va~~gkPviLstG 156 (349)
T 2wqp_A 91 EDEIKLKEYVESK--GMIFISTL---------FSRAAALRLQR-M--DIPAYKIGSGECNNYPLIKLVASFGKPIILSTG 156 (349)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEE---------CSHHHHHHHHH-H--TCSCEEECGGGTTCHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHHHHHHHHh--CCeEEEee---------CCHHHHHHHHh-c--CCCEEEECcccccCHHHHHHHHhcCCeEEEECC
Confidence 4456667777777 99998887 55555554433 2 25666533322 2333 2333
Q ss_pred CCCHHHHHHHHHHHHhcCCCeEEE
Q 024300 168 IGSEADGREACKILHAAGPAKVVI 191 (269)
Q Consensus 168 ~~~~~~~~~a~~~l~~~g~~~Vvv 191 (269)
..+.++++.+++.+.+.|.+.+++
T Consensus 157 mat~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 157 MNSIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp TCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE
Confidence 257899999999998888744443
No 96
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=36.06 E-value=82 Score=25.61 Aligned_cols=36 Identities=17% Similarity=0.110 Sum_probs=23.6
Q ss_pred CCCcEEEEecccccCccccccchHHHHhcCCceeeece
Q 024300 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHS 50 (269)
Q Consensus 13 ~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~ 50 (269)
.|++||.+.|+.... |.....+.|++.|++++.++.
T Consensus 3 ~m~~vLiV~g~~~~~--~a~~l~~aL~~~g~~V~~i~~ 38 (259)
T 3rht_A 3 AMTRVLYCGDTSLET--AAGYLAGLMTSWQWEFDYIPS 38 (259)
T ss_dssp ---CEEEEESSCTTT--THHHHHHHHHHTTCCCEEECT
T ss_pred CCceEEEECCCCchh--HHHHHHHHHHhCCceEEEecc
Confidence 578999998765332 334466678999999887663
No 97
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=35.77 E-value=1.1e+02 Score=24.78 Aligned_cols=55 Identities=13% Similarity=0.094 Sum_probs=33.3
Q ss_pred CHHHHHHHHHHHHhCCCccccEEEEccc-CChhhHHHHHHHHHHHHhcCCCceEEEcccccc
Q 024300 68 NGQQLCDLIEGLEANNLLYYTHLLTGYI-GSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD 128 (269)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~i~~G~l-~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~ 128 (269)
+.++..++++.+.. +.+.+++|+- ......+.+.++.+.++.+ +.+|++|.-..+
T Consensus 42 ~~~~al~l~~~l~~----~v~~~KvG~~l~~~~G~~~v~~L~~~a~~~--g~~VflDlK~~D 97 (260)
T 3eww_A 42 LARELLQLADALGP----SICMLKTHVDILNDFTLDVMKELITLAKCH--EFLIFENRKFAD 97 (260)
T ss_dssp CHHHHHHHHHHHGG----GCSEEEECGGGCTTCCHHHHHHHHHHHHHH--TCEEEEEEEECS
T ss_pred CHHHHHHHHHHhCC----CceEEEEcHHHHHHhCHHHHHHHHHHHhhc--CCeEEEEeeccc
Confidence 34556666666653 3567999953 2223345555555555556 889999975543
No 98
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=35.76 E-value=55 Score=23.26 Aligned_cols=65 Identities=11% Similarity=0.092 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhhCCCCCCHHHHHHHHHH
Q 024300 102 NTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKI 180 (269)
Q Consensus 102 ~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~g~~~~~~~~~~~a~~~ 180 (269)
+.+..+.+..+.+ ++.++.||-.. .+..++.+.+ .+|.+........+. |.+--+.+.+.++++.
T Consensus 39 ~~l~~I~~~~~~r--~VIi~TD~D~~-------GekIRk~i~~-~lp~~~hafi~r~~~----gVE~a~~~~I~~aL~~ 103 (119)
T 2fcj_A 39 ARLEELADELEGY--DVYLLADADEA-------GEKLRRQFRR-MFPEAEHLYIDRAYR----EVAAAPIWHLAQVLLR 103 (119)
T ss_dssp HHHHHHHHHTTTS--EEEEECCSSHH-------HHHHHHHHHH-HCTTSEEECCCTTTC----STTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC--CEEEEECCCcc-------HHHHHHHHHH-HCCCCcEEeccCCcc----CcccCCHHHHHHHHHh
Confidence 3344444455444 77888898432 2344455555 788887766666553 6655556666666544
No 99
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=35.03 E-value=91 Score=28.23 Aligned_cols=54 Identities=13% Similarity=0.144 Sum_probs=24.9
Q ss_pred HHHHHHHHHhCCCccccEEEEcccCChhh-------HHHHH-------HHHHHHHhcCCCceEEEccc
Q 024300 72 LCDLIEGLEANNLLYYTHLLTGYIGSVSF-------LNTIL-------QVVEKLRSINPNLIYVCDPV 125 (269)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~i~~G~l~~~~~-------~~~i~-------~~l~~~k~~~~~~~vv~Dp~ 125 (269)
.+..++.+++..+-.+|.|.+.+-|=++. .+.+. .+++.+.+++..+.||.||.
T Consensus 102 ~~~h~~~l~~~~I~~iDlVvvNLYPF~~tv~~~~~~~~~iE~IDIGGpsmlRAAAKN~~~V~Vv~dp~ 169 (534)
T 4ehi_A 102 DENHIKQAKENEILGIDLVCVNLYPFKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDPL 169 (534)
T ss_dssp ------------CEEESEEEEECCCHHHHHHHCCCHHHHHHTSCSSHHHHHHHHHHTTTTCEEECCGG
T ss_pred CHHHHHHHHHcCCCceeEEEEeCcChHHHHhcCCCHHHHHHHhhcCcHHHHHHHHHcCCCEEEECCHH
Confidence 33344445555555678887776552221 11221 34555566667899999993
No 100
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=34.33 E-value=70 Score=27.21 Aligned_cols=57 Identities=12% Similarity=0.159 Sum_probs=39.0
Q ss_pred CHHHHHHHHHHHHhCCCcc-ccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEcccc
Q 024300 68 NGQQLCDLIEGLEANNLLY-YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVM 126 (269)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~-~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~ 126 (269)
++..+++++..+....++. +.+|++|-.........+.+++...-+. ++||++|...
T Consensus 259 ~~y~idRmL~qL~~aG~f~~~~GiilG~~~~~~~~~~~~~vl~~~l~~--~iPV~~~~~~ 316 (346)
T 4eys_A 259 KPEDFKKMLLTLKDTGIFAVINGLLVGKPMDETFHDDYKEALLDIIDS--NIPIVYNLNV 316 (346)
T ss_dssp CHHHHHHHHHHHHTTTGGGTCSEEEEECCGGGTTHHHHHHHHHHHSCT--TSCEEEEESC
T ss_pred CHHHHHHHHHHHHHcCCcccCCEEEEecCCCCCcchhHHHHHHHHHcC--CCcEEECCCC
Confidence 3478999999998887765 6789999754322333455555555443 8999999644
No 101
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=33.89 E-value=1.4e+02 Score=22.05 Aligned_cols=101 Identities=11% Similarity=0.031 Sum_probs=53.2
Q ss_pred ecCHHHHHHHHHHHHhCCCccccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHh
Q 024300 66 VLNGQQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREK 145 (269)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ 145 (269)
.++.+.+++..+.+.+.. ..+..|...+........ .++... +.++.+-+. . ..+..... .
T Consensus 23 ~l~~~~l~~~~~~i~~a~----~I~i~G~G~S~~~a~~~~---~~l~~~--g~~~~~~~~---~-----~~~~~~~~-~- 83 (187)
T 3sho_A 23 QTQPEAIEAAVEAICRAD----HVIVVGMGFSAAVAVFLG---HGLNSL--GIRTTVLTE---G-----GSTLTITL-A- 83 (187)
T ss_dssp TCCHHHHHHHHHHHHHCS----EEEEECCGGGHHHHHHHH---HHHHHT--TCCEEEECC---C-----THHHHHHH-H-
T ss_pred hCCHHHHHHHHHHHHhCC----EEEEEecCchHHHHHHHH---HHHHhc--CCCEEEecC---C-----chhHHHHH-h-
Confidence 466788888888887654 345677754433333333 333333 555543320 0 01111111 1
Q ss_pred ccCCCcEEcCCHHHHHHhhCCCCCCHHHHHHHHHHHHhcCCCeEEEEee
Q 024300 146 VVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSI 194 (269)
Q Consensus 146 ll~~~dii~pN~~E~~~l~g~~~~~~~~~~~a~~~l~~~g~~~Vvvt~g 194 (269)
.+..-|+++. -...|. + .+..++++...+.|++.|.+|..
T Consensus 84 ~~~~~d~~i~-----iS~sG~---t-~~~~~~~~~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 84 NLRPTDLMIG-----VSVWRY---L-RDTVAALAGAAERGVPTMALTDS 123 (187)
T ss_dssp TCCTTEEEEE-----ECCSSC---C-HHHHHHHHHHHHTTCCEEEEESC
T ss_pred cCCCCCEEEE-----EeCCCC---C-HHHHHHHHHHHHCCCCEEEEeCC
Confidence 2333344322 111232 2 46777888888999999999984
No 102
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=33.04 E-value=1.4e+02 Score=23.33 Aligned_cols=118 Identities=11% Similarity=0.122 Sum_probs=58.8
Q ss_pred CCCCcEEEEecccccCccccccchHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCCccccEEE
Q 024300 12 SETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (269)
Q Consensus 12 ~~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 91 (269)
++.++|+...--.=..-+|..-....|+..|+++..+- ..++.+++-+. +.+. .+|+|.
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG---------------~~vp~e~iv~~---~~~~---~~d~v~ 148 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLG---------------VDVLNENVVEE---AAKH---KGEKVL 148 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECC---------------SSCCHHHHHHH---HHHT---TTSCEE
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcC---------------CCCCHHHHHHH---HHHc---CCCEEE
Confidence 34455554332222223343333445677777654332 23444555333 3332 256555
Q ss_pred E--cccCChhhHHHHHHHHHHHHhcCC--CceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCHHHHHHhh
Q 024300 92 T--GYIGSVSFLNTILQVVEKLRSINP--NLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLT 164 (269)
Q Consensus 92 ~--G~l~~~~~~~~i~~~l~~~k~~~~--~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~~E~~~l~ 164 (269)
+ ..+. ......+.++++.+++..+ +++|++=-.. ..+++.+ + + .+|...+|-.|+-.+.
T Consensus 149 l~~S~l~-~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~~-------~~~~~a~---~-i--Gad~~~~dA~~av~~a 211 (215)
T 3ezx_A 149 LVGSALM-TTSMLGQKDLMDRLNEEKLRDSVKCMFGGAP-------VSDKWIE---E-I--GADATAENAAEAAKVA 211 (215)
T ss_dssp EEEECSS-HHHHTHHHHHHHHHHHTTCGGGSEEEEESSS-------CCHHHHH---H-H--TCCBCCSSHHHHHHHH
T ss_pred EEchhcc-cCcHHHHHHHHHHHHHcCCCCCCEEEEECCC-------CCHHHHH---H-h--CCeEEECCHHHHHHHH
Confidence 5 3332 3455667788888887633 4566553211 2334332 1 2 6788888887776553
No 103
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=30.87 E-value=1.6e+02 Score=21.70 Aligned_cols=88 Identities=15% Similarity=0.104 Sum_probs=47.5
Q ss_pred CCCcEEEE-ecccccCccccccchHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCCccccEEE
Q 024300 13 ETGRVLSI-QSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLL 91 (269)
Q Consensus 13 ~~~~vl~i-~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 91 (269)
..++|+.. .+.|. .-+|..-....|+..|+++..+-. ..+.+++.+.. .+. .+++|.
T Consensus 17 ~~~~vlla~~~gd~-HdiG~~~va~~l~~~G~eVi~lG~---------------~~p~e~lv~aa---~~~---~~diV~ 74 (161)
T 2yxb_A 17 RRYKVLVAKMGLDG-HDRGAKVVARALRDAGFEVVYTGL---------------RQTPEQVAMAA---VQE---DVDVIG 74 (161)
T ss_dssp CSCEEEEEEESSSS-CCHHHHHHHHHHHHTTCEEECCCS---------------BCCHHHHHHHH---HHT---TCSEEE
T ss_pred CCCEEEEEeCCCCc-cHHHHHHHHHHHHHCCCEEEECCC---------------CCCHHHHHHHH---Hhc---CCCEEE
Confidence 34455544 34443 345555555567888877654432 23445554433 322 267666
Q ss_pred EcccCChhhHHHHHHHHHHHHhcCC-CceEEEc
Q 024300 92 TGYIGSVSFLNTILQVVEKLRSINP-NLIYVCD 123 (269)
Q Consensus 92 ~G~l~~~~~~~~i~~~l~~~k~~~~-~~~vv~D 123 (269)
+..+.. ...+.+.++++.+++..+ +++|++=
T Consensus 75 lS~~~~-~~~~~~~~~i~~L~~~g~~~i~v~vG 106 (161)
T 2yxb_A 75 VSILNG-AHLHLMKRLMAKLRELGADDIPVVLG 106 (161)
T ss_dssp EEESSS-CHHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred EEeech-hhHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 655433 456667778888877632 4666654
No 104
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=29.96 E-value=68 Score=25.56 Aligned_cols=53 Identities=21% Similarity=0.103 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHhCCCccccEEEEcccCCh--hhHHHHHHHHHHHHhcCCCceEEEc
Q 024300 67 LNGQQLCDLIEGLEANNLLYYTHLLTGYIGSV--SFLNTILQVVEKLRSINPNLIYVCD 123 (269)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~i~~G~l~~~--~~~~~i~~~l~~~k~~~~~~~vv~D 123 (269)
.+.++++.+.+++....-...++|.+|.|... ...+.+.++++.++ +.++.|-
T Consensus 70 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~----~~~vTFH 124 (224)
T 2bdq_A 70 YNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ----GLPLVFH 124 (224)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT----TCCEEEC
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC----CCeEEEE
Confidence 44677777777766544345789999999643 33567888887775 5567665
No 105
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=29.80 E-value=1.4e+02 Score=20.80 Aligned_cols=34 Identities=3% Similarity=-0.094 Sum_probs=18.0
Q ss_pred ccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEc
Q 024300 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCD 123 (269)
Q Consensus 87 ~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~D 123 (269)
+|+|++..-.+.... .++++.+++..+++++|+=
T Consensus 59 ~dlvi~D~~l~~~~g---~~~~~~l~~~~~~~~ii~~ 92 (153)
T 3hv2_A 59 VDLVISAAHLPQMDG---PTLLARIHQQYPSTTRILL 92 (153)
T ss_dssp CSEEEEESCCSSSCH---HHHHHHHHHHCTTSEEEEE
T ss_pred CCEEEEeCCCCcCcH---HHHHHHHHhHCCCCeEEEE
Confidence 687877754332222 2334444544457777653
No 106
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=28.23 E-value=1.1e+02 Score=24.91 Aligned_cols=37 Identities=22% Similarity=0.155 Sum_probs=23.2
Q ss_pred cc-cEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEccccc
Q 024300 86 YY-THLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG 127 (269)
Q Consensus 86 ~~-~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~ 127 (269)
+. +.+++|+-. ....=.+.++.+++. +.+|++|.-..
T Consensus 29 ~v~~~~KvG~~l---~~~~G~~~v~~Lk~~--g~~VflDlK~~ 66 (259)
T 3tfx_A 29 PHDVFVKVGMEL---FYNAGIDVIKKLTQQ--GYKIFLDLKMH 66 (259)
T ss_dssp GGGCEEEECHHH---HHHHCHHHHHHHHHT--TCEEEEEEEEC
T ss_pred ccceEEEeCHHH---HHhcCHHHHHHHHHC--CCcEEEEeccc
Confidence 35 678999721 112223456677776 88999996543
No 107
>4eb5_C NIFU protein (NIFU-1); scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_C*
Probab=27.85 E-value=22 Score=26.59 Aligned_cols=41 Identities=15% Similarity=0.123 Sum_probs=29.5
Q ss_pred CCCchHHHH---HHHHHhhccCCCCHHHHHHHHHHHHHHHhhcCC
Q 024300 228 FTGTGDLMT---ALLLGWSNKYRDNLDIAAELAVSSLQVLLLLMP 269 (269)
Q Consensus 228 t~GaGDaf~---a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~~~ 269 (269)
..|-||+.+ +.+++-++. |+++++|.......+...|+..|
T Consensus 53 F~g~GCais~ASaS~mtelv~-GKtleEA~~i~~~~i~~~L~glp 96 (153)
T 4eb5_C 53 FQTFGCAAAIATSSMATEMAK-GKTIEEALKITRDAVAEALGGLP 96 (153)
T ss_dssp EEEESCHHHHHHHHHHHHHHT-TCBHHHHTTCCHHHHHHHHTCCC
T ss_pred EEEeCcHHHHHHHHHHHHHHc-CCCHHHHHHhhHHHHHHHhcCCC
Confidence 455566554 567777888 99999999887776666775543
No 108
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=27.47 E-value=2.2e+02 Score=24.29 Aligned_cols=39 Identities=15% Similarity=0.083 Sum_probs=26.7
Q ss_pred ccEEEEcccC-C---hhhHHHHHHHHHHHHhcCCCceEEEccccc
Q 024300 87 YTHLLTGYIG-S---VSFLNTILQVVEKLRSINPNLIYVCDPVMG 127 (269)
Q Consensus 87 ~~~i~~G~l~-~---~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~ 127 (269)
++++++|+-. . ......+.++++.++++ +.+|++|.-..
T Consensus 119 v~~vKvg~~lf~~~G~~gv~~L~~~i~~lk~~--g~~VflDlK~~ 161 (352)
T 2fds_A 119 ALIYKMNFAFYIPYGSVGINALKNVFDYLNSM--NIPTMLDMKIN 161 (352)
T ss_dssp CSEEEEEGGGTGGGTHHHHHHHHHHHHHHHHT--TCCEEEEEEEC
T ss_pred cCEEEecHHHHHhCCHHHHHHHHHHHHHHHHC--CCeEEEEeecC
Confidence 5678998632 1 22244566777888887 89999997544
No 109
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=26.72 E-value=1e+02 Score=24.60 Aligned_cols=49 Identities=18% Similarity=0.048 Sum_probs=27.0
Q ss_pred HHHHHHHHHhCCCccccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEcccc
Q 024300 72 LCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVM 126 (269)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~ 126 (269)
.++.++.+++..- +.+.+++|+-. ....=.++++.++++ +.+|++|.-.
T Consensus 20 ~~~al~l~~~~~~-~v~~~Kvg~~l---f~~~G~~~v~~L~~~--g~~iflDlK~ 68 (239)
T 3tr2_A 20 VEQARAQINPLTP-ELCHLKIGSIL---FTRYGPAFVEELMQK--GYRIFLDLKF 68 (239)
T ss_dssp HHHHHHHHTTCCT-TTCEEEEEHHH---HHHHHHHHHHHHHHT--TCCEEEEEEE
T ss_pred HHHHHHHHHHhCC-cccEEEeCHHH---HHhhCHHHHHHHHhc--CCCEEEEecc
Confidence 4444444443321 35678888721 122223456677776 7899999644
No 110
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=26.67 E-value=91 Score=25.36 Aligned_cols=54 Identities=11% Similarity=0.170 Sum_probs=37.1
Q ss_pred cCHHHHHHHHHHHHhCCCccccEEEEcccCCh--hhHHHHHHHHHHHHhcCCCceEEEcc
Q 024300 67 LNGQQLCDLIEGLEANNLLYYTHLLTGYIGSV--SFLNTILQVVEKLRSINPNLIYVCDP 124 (269)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~i~~G~l~~~--~~~~~i~~~l~~~k~~~~~~~vv~Dp 124 (269)
.+.++++.+.+++....-..+++|.+|.|... ...+.+.++++.++ +.++.|-=
T Consensus 67 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~----~~~vTFHR 122 (256)
T 1twd_A 67 YSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG----PLAVTFHR 122 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT----TSEEEECG
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC----CCcEEEEC
Confidence 45677877777766544345789999999643 33567788887774 56777753
No 111
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=26.43 E-value=2.7e+02 Score=22.91 Aligned_cols=71 Identities=13% Similarity=0.132 Sum_probs=43.6
Q ss_pred HHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccCCCcEEcCCH---------HHHHHhhCCCC-------CC
Q 024300 107 VVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQ---------FEAEQLTGFRI-------GS 170 (269)
Q Consensus 107 ~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~dii~pN~---------~E~~~l~g~~~-------~~ 170 (269)
+.+.+++. +++++-++ ++.+..+.+ ..++|+++.-- .|+.. ++.++ .+
T Consensus 83 L~~~~~e~--Glp~~Tev---------~d~~~v~~l----~~~vd~lqIgA~~~~n~~LLr~va~-~gkPVilK~G~~~t 146 (285)
T 3sz8_A 83 FAEVKARF--GVPVITDV---------HEAEQAAPV----AEIADVLQVPAFLARQTDLVVAIAK-AGKPVNVKKPQFMS 146 (285)
T ss_dssp HHHHHHHH--CCCEEEEC---------CSGGGHHHH----HTTCSEEEECGGGTTCHHHHHHHHH-TSSCEEEECCTTSC
T ss_pred HHHHHHhc--CCeEEEEe---------CCHHHHHHH----HHhCCEEEECccccCCHHHHHHHHc-cCCcEEEeCCCCCC
Confidence 33444455 99998887 444444433 33577775322 23332 23332 26
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEe
Q 024300 171 EADGREACKILHAAGPAKVVITS 193 (269)
Q Consensus 171 ~~~~~~a~~~l~~~g~~~Vvvt~ 193 (269)
.++++.+++.+.+.|.+.|++..
T Consensus 147 ~~ei~~ave~i~~~Gn~~i~L~e 169 (285)
T 3sz8_A 147 PTQLKHVVSKCGEVGNDRVMLCE 169 (285)
T ss_dssp GGGTHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEe
Confidence 68889999999988988877764
No 112
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=26.32 E-value=1.7e+02 Score=23.00 Aligned_cols=51 Identities=14% Similarity=0.182 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCCCccccEEEEcccCChhhHHHHHHHHHHHHh-cCCCceEEEccccc
Q 024300 71 QLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRS-INPNLIYVCDPVMG 127 (269)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~i~~G~l~~~~~~~~i~~~l~~~k~-~~~~~~vv~Dp~~~ 127 (269)
.+++.++.+++..- +.+.+++|.. -....=..+++.+++ . +.++++|.-..
T Consensus 23 ~~~~a~~~v~~~~~-~v~~~Kvg~~---lf~~~G~~~v~~l~~~~--g~~v~lD~Kl~ 74 (228)
T 3m47_A 23 NRDDALRVTGEVRE-YIDTVKIGYP---LVLSEGMDIIAEFRKRF--GCRIIADFKVA 74 (228)
T ss_dssp SHHHHHHHHHTTTT-TCSEEEEEHH---HHHHHCTHHHHHHHHHH--CCEEEEEEEEC
T ss_pred CHHHHHHHHHHcCC-cccEEEEcHH---HHHhcCHHHHHHHHhcC--CCeEEEEEeec
Confidence 33444444443221 2567888762 111111234555665 5 78999997554
No 113
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=26.17 E-value=93 Score=24.45 Aligned_cols=70 Identities=14% Similarity=0.216 Sum_probs=37.4
Q ss_pred HHHHHHHHHhCCCccccEEEEcccCChhhHHHHHHHHHHHHh-cCCCceEEEccccccCCCccCChhhHHHHHHhccCCC
Q 024300 72 LCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRS-INPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVA 150 (269)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~i~~G~l~~~~~~~~i~~~l~~~k~-~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~~~ 150 (269)
..++++.+.. +.+.+++|+-. ....=.+.++.+++ + +.+|++|.-..+ ++.......+. +...+
T Consensus 13 al~l~~~l~~----~v~~~KvG~~l---~~~~G~~~v~~L~~~~--g~~VflDlK~~D-----IpnTv~~a~~~-~~~~a 77 (215)
T 3ve9_A 13 PEETLRKLNG----KVAGIKVGWPL---LLNLGKEKVKELVGLV--DGIKILDLKLAD-----IDNTMILIVDE-LKDIT 77 (215)
T ss_dssp CHHHHHHHHT----TSSEEEEEHHH---HHHHCHHHHHHHHTTC--CSEEEEEEEECS-----CHHHHHHHHHH-HTTTC
T ss_pred HHHHHHHhCC----cCcEEEecHHH---HHhhCHHHHHHHHHhc--CCcEEEEecccC-----chhHHHHHHHH-HHHhh
Confidence 3445555543 24678999721 11112245566776 5 889999976554 22222222232 33347
Q ss_pred cEEcCC
Q 024300 151 SMLTPN 156 (269)
Q Consensus 151 dii~pN 156 (269)
|+++.|
T Consensus 78 d~vTvh 83 (215)
T 3ve9_A 78 NSFIAH 83 (215)
T ss_dssp SEEEEE
T ss_pred heEEEe
Confidence 877654
No 114
>1zla_K Latent nuclear antigen; latency associated nuclear antigen (LANA), kaposi'S sarcoma herpes virus (KSHV), nucleosome core particle, chromatin; 2.90A {Xenopus laevis}
Probab=25.27 E-value=29 Score=16.78 Aligned_cols=20 Identities=40% Similarity=0.492 Sum_probs=15.5
Q ss_pred CCCCccccCCCCCCCcEEEE
Q 024300 1 MAPPILSLALPSETGRVLSI 20 (269)
Q Consensus 1 ~~~~~~~~~~~~~~~~vl~i 20 (269)
||||-.-+-++-+.+.-|+-
T Consensus 1 mappgmrlrsgrstgapltr 20 (26)
T 1zla_K 1 MAPPGMRLRSGRSTGAPLTR 20 (26)
T ss_pred CCCCcceeecCcccCCcccc
Confidence 88998888888887766553
No 115
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=25.23 E-value=2e+02 Score=21.03 Aligned_cols=23 Identities=9% Similarity=-0.047 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhcCCCeEEEEee
Q 024300 172 ADGREACKILHAAGPAKVVITSI 194 (269)
Q Consensus 172 ~~~~~a~~~l~~~g~~~Vvvt~g 194 (269)
.+..++++...+.|++.|.+|..
T Consensus 96 ~~~~~~~~~ak~~g~~vi~IT~~ 118 (180)
T 1jeo_A 96 ESVLTVAKKAKNINNNIIAIVCE 118 (180)
T ss_dssp HHHHHHHHHHHTTCSCEEEEESS
T ss_pred HHHHHHHHHHHHCCCcEEEEeCC
Confidence 46677788888899999999984
No 116
>4gh9_A Polymerase cofactor VP35; viral polymerase, interferon inhibition, double stranded VIR viral protein,RNA binding protein; 1.65A {Marburg virus}
Probab=25.02 E-value=86 Score=22.34 Aligned_cols=28 Identities=11% Similarity=0.045 Sum_probs=23.8
Q ss_pred CCCchHHHHHHHHHhhccCCCCHHHHHHH
Q 024300 228 FTGTGDLMTALLLGWSNKYRDNLDIAAEL 256 (269)
Q Consensus 228 t~GaGDaf~a~~~~~l~~~g~~~~~a~~~ 256 (269)
-.|.-|+|.+.|-+.|++ |.+++-|+..
T Consensus 58 d~~~~~~i~~~f~asLae-GdspQcALiq 85 (146)
T 4gh9_A 58 KSGKSGAFLDAFHQILSE-GENAQAALTR 85 (146)
T ss_dssp HTTCHHHHHHHHHHHHHT-TCCHHHHHHH
T ss_pred ccCchhHHHHHHHHHHhc-CCCcchhhHh
Confidence 368889999999999998 9998877654
No 117
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=24.76 E-value=93 Score=19.36 Aligned_cols=29 Identities=7% Similarity=-0.031 Sum_probs=22.8
Q ss_pred CHHHHHHhhCCCCC----CHHHHHHHHHHHHhc
Q 024300 156 NQFEAEQLTGFRIG----SEADGREACKILHAA 184 (269)
Q Consensus 156 N~~E~~~l~g~~~~----~~~~~~~a~~~l~~~ 184 (269)
+..|+..++|.... +.+.++++.+.|...
T Consensus 2 t~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~ 34 (65)
T 2guz_B 2 TLDESCKILNIEESKGDLNMDKINNRFNYLFEV 34 (65)
T ss_dssp CHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHH
Confidence 57899999998654 678888888888753
No 118
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=24.48 E-value=1.8e+02 Score=23.99 Aligned_cols=63 Identities=11% Similarity=0.040 Sum_probs=37.0
Q ss_pred ccEEEEcccC---C-hhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHHHHHHhccC---CCcEEcCCH
Q 024300 87 YTHLLTGYIG---S-VSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVP---VASMLTPNQ 157 (269)
Q Consensus 87 ~~~i~~G~l~---~-~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~~~~ll~---~~dii~pN~ 157 (269)
..++++|+-. . ......+.++++.++++ +.+|++|.-..+ +........+. ++. .+|.++.|.
T Consensus 60 v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~~--g~~VflDlK~~D-----IpnTv~~~a~~-~~~~~lg~D~vTvh~ 129 (290)
T 3r89_A 60 CAIYKLQIAYYESYGIEGMIAYRDTLSYLREK--DLLSIGDVKRSD-----IAASAKMYAKA-HFEGDFETDFITLNP 129 (290)
T ss_dssp CSEEEEEHHHHHTTHHHHHHHHHHHHHHHHHT--TCCEEEEEEECC-----CHHHHHHHHHH-HHSGGGCCSEEEECC
T ss_pred ceEEEecHHHHHhcCHHHHHHHHHHHHHHHHC--CCeEEEEecccC-----cHHHHHHHHHH-HhccccCCCEEEEcc
Confidence 5678998531 1 12244566778888888 899999975553 22222222222 333 378877664
No 119
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=24.08 E-value=2.6e+02 Score=23.80 Aligned_cols=39 Identities=13% Similarity=0.080 Sum_probs=27.0
Q ss_pred ccEEEEcccC--C--hhhHHHHHHHHHHHHhcCCCceEEEccccc
Q 024300 87 YTHLLTGYIG--S--VSFLNTILQVVEKLRSINPNLIYVCDPVMG 127 (269)
Q Consensus 87 ~~~i~~G~l~--~--~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~ 127 (269)
++++++|+-. . ......+.++++.++++ +.+|++|.-..
T Consensus 129 v~~vKvg~~lfea~G~~gi~~L~~~v~~lr~~--g~~VflDlK~~ 171 (353)
T 2ffc_A 129 ALAYKMNFAFYLPYGSLGVDVLKNVFDYLHHL--NVPTILDIKMN 171 (353)
T ss_dssp CSEEEEEGGGGSTTTHHHHHHHHHHHHHHHHH--TCCEEEEEEEC
T ss_pred cceeeccHHHHHhcCHHHHHHHHHHHHHHHHc--CCcEEEEEecC
Confidence 4678988632 1 22345567778899988 89999996443
No 120
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=23.90 E-value=1.9e+02 Score=24.17 Aligned_cols=55 Identities=15% Similarity=0.109 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHHHhCCCccccEEEEccc-CChhhHHHHHHHHHHHHhcCCCceEEEcccccc
Q 024300 68 NGQQLCDLIEGLEANNLLYYTHLLTGYI-GSVSFLNTILQVVEKLRSINPNLIYVCDPVMGD 128 (269)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~i~~G~l-~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~ 128 (269)
+.++..++++.+.. +.+.+++|+- ......+.+.++.+.++++ +.+|++|.-..+
T Consensus 94 ~~~~al~l~~~l~~----~v~~vKvG~~l~~~~G~~~v~~L~~~a~~~--g~~IflDlK~~D 149 (312)
T 3g3d_A 94 LARELLQLADALGP----SICMLKTHVDILNDFTLDVMKELITLAKCH--EFLIFEDRKFAD 149 (312)
T ss_dssp CHHHHHHHHHHHGG----GCSEEEECGGGCTTCCHHHHHHHHHHHHHH--TCEEEEEEEECS
T ss_pred CHHHHHHHHHHhCC----CceEEEEcHHHHHHhCHHHHHHHHHHHhhC--CCEEEEECcccc
Confidence 44555666666643 3567999953 2223345566555555556 889999975543
No 121
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=22.70 E-value=4.4e+02 Score=24.08 Aligned_cols=123 Identities=7% Similarity=0.068 Sum_probs=67.0
Q ss_pred CCCcEEEEecccccCccccccchHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCCccccEEEE
Q 024300 13 ETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLYYTHLLT 92 (269)
Q Consensus 13 ~~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 92 (269)
+.++||...--.-..-+|..-....|+..|+++..+- ..++.+++.+...... +++|.+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG---------------~~vP~e~iv~aa~~~~------~diVgL 155 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLG---------------VMVPAEKILRTAKEVN------ADLIGL 155 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECC---------------SSBCHHHHHHHHHHHT------CSEEEE
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECC---------------CCCCHHHHHHHHHHcC------CCEEEE
Confidence 3556665543322333444334445677777654332 2244555544443332 676666
Q ss_pred cccCChhhHHHHHHHHHHHHhcCCCceEEEccccccCCCccCChhhHH-HHHHhccCCCcEEcCCHHHHHHhhC
Q 024300 93 GYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVS-VYREKVVPVASMLTPNQFEAEQLTG 165 (269)
Q Consensus 93 G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~~~~~~~~~~~~~~~-~~~~~ll~~~dii~pN~~E~~~l~g 165 (269)
..+.. .....+.++++.+++..++++|++=-.. ..++... .+.. .+..+|+..++..++-.+..
T Consensus 156 S~l~t-~~~~~m~~~i~~Lr~~g~~i~ViVGGa~-------~~~~~a~~~i~p-~~~GAD~ya~DA~~Av~~a~ 220 (579)
T 3bul_A 156 SGLIT-PSLDEMVNVAKEMERQGFTIPLLIGGAT-------TSKAHTAVKIEQ-NYSGPTVYVQNASRTVGVVA 220 (579)
T ss_dssp ECCST-HHHHHHHHHHHHHHHTTCCSCEEEESTT-------CCHHHHHHHTGG-GCSSCEEECCSHHHHHHHHH
T ss_pred EecCC-CCHHHHHHHHHHHHHcCCCCeEEEEccc-------cchhhhhhhhhh-cccCCeEEECCHHHHHHHHH
Confidence 55543 4456677888888887445666554211 2233221 1222 34478999999998766653
No 122
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=22.30 E-value=2.5e+02 Score=21.10 Aligned_cols=32 Identities=13% Similarity=0.208 Sum_probs=20.9
Q ss_pred CCcEEEEecccccCccccccchHHHHhcCCceeeec
Q 024300 14 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIH 49 (269)
Q Consensus 14 ~~~vl~i~g~~~~g~~G~~a~~~~l~~~Gv~~~~i~ 49 (269)
+++||..+++-..|. ...+.|.+.|..+..+.
T Consensus 4 m~~ilItGatG~iG~----~l~~~L~~~g~~V~~~~ 35 (227)
T 3dhn_A 4 VKKIVLIGASGFVGS----ALLNEALNRGFEVTAVV 35 (227)
T ss_dssp CCEEEEETCCHHHHH----HHHHHHHTTTCEEEEEC
T ss_pred CCEEEEEcCCchHHH----HHHHHHHHCCCEEEEEE
Confidence 567887776644444 56777877887655554
No 123
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=22.16 E-value=2e+02 Score=23.56 Aligned_cols=92 Identities=11% Similarity=0.002 Sum_probs=46.6
Q ss_pred CCCCCCcEEEEecccccCccc---cccchHHHHhcCCceeeeceEEeecCCCCCCcceeecCHHHHHHHHHHHHhCCCcc
Q 024300 10 LPSETGRVLSIQSHTVQGYVG---NKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLLY 86 (269)
Q Consensus 10 ~~~~~~~vl~i~g~~~~g~~G---~~a~~~~l~~~Gv~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
..+.+.+||.|.||.--+.-. .....+.++..|+.+..+... +.. +...... ..++++.++.+.+.+
T Consensus 54 ~~~~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~eveiidL~---dlp-l~~~d~~-~~~d~v~~l~e~I~~----- 123 (279)
T 2fzv_A 54 PDAPPVRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPS---DLP-LPDQVQS-DDHPAVKELRALSEW----- 123 (279)
T ss_dssp CCCSCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCCT---TCC-CTTTSGG-GCCHHHHHHHHHHHH-----
T ss_pred CCCCCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCCEEEEEehh---cCC-CCccCcc-CCCHHHHHHHHHHHH-----
Confidence 345678999999997432222 122445566667765544321 110 0000001 224677778888875
Q ss_pred ccEEEEcccC-ChhhHHHHHHHHHHH
Q 024300 87 YTHLLTGYIG-SVSFLNTILQVVEKL 111 (269)
Q Consensus 87 ~~~i~~G~l~-~~~~~~~i~~~l~~~ 111 (269)
+|++++++-- .......+..+++.+
T Consensus 124 ADgiV~aSP~Yn~sipg~LKn~IDrl 149 (279)
T 2fzv_A 124 SEGQVWCSPERHGQITSVMKAQIDHL 149 (279)
T ss_dssp CSEEEEEEEEETTEECHHHHHHHHHS
T ss_pred CCeEEEEcCccccCcCHHHHHHHHHH
Confidence 5666665421 111223445556655
No 124
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=21.77 E-value=87 Score=28.27 Aligned_cols=49 Identities=14% Similarity=0.165 Sum_probs=28.0
Q ss_pred HHHHhCCCccccEEEEcccCChhh-------HHHHH-------HHHHHHHhcCCCceEEEccc
Q 024300 77 EGLEANNLLYYTHLLTGYIGSVSF-------LNTIL-------QVVEKLRSINPNLIYVCDPV 125 (269)
Q Consensus 77 ~~~~~~~~~~~~~i~~G~l~~~~~-------~~~i~-------~~l~~~k~~~~~~~vv~Dp~ 125 (269)
+.+++..+-.+|.|.+.+-|=++. .+.+. .+++.+.+++..+.||.||.
T Consensus 93 ~~l~~~~i~~iDlVvvNLYPF~~tv~~~~~~~~~iE~IDIGGpsmlRaAAKN~~~V~vv~dp~ 155 (523)
T 3zzm_A 93 AALEQLGIEAFELVVVNLYPFSQTVESGASVDDCVEQIDIGGPAMVRAAAKNHPSAAVVTDPL 155 (523)
T ss_dssp HHHHHHTCCCCSEEEEECCCHHHHHHTTCCHHHHHHTCCSHHHHHHHHHHHTTTTCEEECCGG
T ss_pred HHHHHCCCCceeEEEEeCCChHHHHhcCCCHHHHHHhcccCcHHHHHHHHhcCCCEEEECCHH
Confidence 334444444578887776552111 12221 34555666667899999993
No 125
>1j2q_H Proteasome beta subunit; ubiquitin, CP, hydrolase; HET: CIB; 2.83A {Archaeoglobus fulgidus} SCOP: d.153.1.4
Probab=21.49 E-value=1.4e+02 Score=22.78 Aligned_cols=40 Identities=28% Similarity=0.179 Sum_probs=32.3
Q ss_pred CCCchHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 228 FTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 228 t~GaGDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
.+|.|-.++=+++-..-+.+++.+||++.|..+...+.++
T Consensus 128 aiG~g~~~a~~~Le~~~~~~~s~eea~~la~~al~~~~~~ 167 (202)
T 1j2q_H 128 ATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKR 167 (202)
T ss_dssp EESTTHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred EEcCCHHHHHHHHHhhcCCCcCHHHHHHHHHHHHHHHHhc
Confidence 4799988887777655544899999999999999887764
No 126
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=21.40 E-value=62 Score=28.31 Aligned_cols=25 Identities=12% Similarity=0.248 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhcCCCceEEEccccc
Q 024300 101 LNTILQVVEKLRSINPNLIYVCDPVMG 127 (269)
Q Consensus 101 ~~~i~~~l~~~k~~~~~~~vv~Dp~~~ 127 (269)
.+.+.++++.|+++ ++.||+|.|+.
T Consensus 76 ~~df~~lv~~aH~~--Gi~VilD~V~N 100 (496)
T 4gqr_A 76 EDEFRNMVTRCNNV--GVRIYVDAVIN 100 (496)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEECCS
T ss_pred HHHHHHHHHHHHHC--CCEEEEEEccC
Confidence 45677899999999 99999997764
No 127
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=20.92 E-value=1.8e+02 Score=23.53 Aligned_cols=51 Identities=16% Similarity=0.064 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhCCCccccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEEEcccc
Q 024300 70 QQLCDLIEGLEANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVM 126 (269)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv~Dp~~ 126 (269)
...++.++.+++..- +.+.+++|+- -....=.++++.++++ +.+|++|.-.
T Consensus 37 ~~~~~al~l~~~l~~-~v~~~KvG~~---l~~~~G~~~v~~Lk~~--g~~VflDlK~ 87 (255)
T 3ldv_A 37 DNLADALAFVDKIDP-STCRLKVGKE---MFTLFGPDFVRELHKR--GFSVFLDLKF 87 (255)
T ss_dssp SSHHHHHHHHTTSCG-GGCEEEEEHH---HHHHHHHHHHHHHHHT--TCCEEEEEEE
T ss_pred CCHHHHHHHHHHhCC-cCcEEEeCHH---HHHhhCHHHHHHHHhc--CCCEEEEEec
Confidence 344444444443321 3567899972 1122223566777776 8899999644
No 128
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=20.41 E-value=92 Score=28.58 Aligned_cols=53 Identities=9% Similarity=0.147 Sum_probs=31.2
Q ss_pred HHHHHHHHhCCCccccEEEEcccCChhh--------HHHHH-------HHHHHHHhcCCCceEEEccc
Q 024300 73 CDLIEGLEANNLLYYTHLLTGYIGSVSF--------LNTIL-------QVVEKLRSINPNLIYVCDPV 125 (269)
Q Consensus 73 ~~~~~~~~~~~~~~~~~i~~G~l~~~~~--------~~~i~-------~~l~~~k~~~~~~~vv~Dp~ 125 (269)
+..++.+++..+-.+|.|.+.+-|=.+. .+.+. .+++.+.+++..+.||.||.
T Consensus 83 ~~h~~~l~~~~I~~iDlVvvNLYPF~~tva~~~~~~~e~iEnIDIGGptmlRaAAKN~~~V~Vv~dp~ 150 (593)
T 1g8m_A 83 PEDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPEAVEKIDIGGVALLRAAAKNHARVTVVCDPA 150 (593)
T ss_dssp HHHHHHHHHTTCCCEEEEEEECCCHHHHHTSTTCCHHHHHTTCCSHHHHHHHHHHHTTTTCEEECCGG
T ss_pred HHHHHHHHHcCCCceeEEEEeccCHHHhhccCCCCHHHHHhhCCCCcHHHHHHHHhCCCCEEEECCHH
Confidence 3444556666655678777766541111 12221 35566666677899999995
No 129
>1ryp_K 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1fnt_K 1g0u_J* 1jd2_J* 1g65_J 1vsy_K 1z7q_K 2f16_J* 2fak_J* 2fny_J* 2gpl_J* 2zcy_J* 3bdm_J* 3d29_J* 3dy3_J* 3dy4_J* 3e47_J* 3gpj_J* 3gpt_J* 3gpw_J* 3hye_J* ...
Probab=20.37 E-value=1.7e+02 Score=22.05 Aligned_cols=40 Identities=18% Similarity=0.038 Sum_probs=32.0
Q ss_pred CCCchHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhhc
Q 024300 228 FTGTGDLMTALLLGWSNKYRDNLDIAAELAVSSLQVLLLL 267 (269)
Q Consensus 228 t~GaGDaf~a~~~~~l~~~g~~~~~a~~~A~~~~~~~l~~ 267 (269)
.+|.|-.++=+++-..-+.+++.+||++.+..+...+.++
T Consensus 132 aiG~g~~~a~~~Le~~~~~~~s~eea~~l~~~al~~~~~~ 171 (198)
T 1ryp_K 132 AHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKR 171 (198)
T ss_dssp ECTTHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEcccHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5799988887777665544899999999999998887654
No 130
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=20.23 E-value=2e+02 Score=19.95 Aligned_cols=30 Identities=7% Similarity=-0.052 Sum_probs=19.8
Q ss_pred ccEEEEcccCChhhHHHHHHHHHHHHhcCCCceEE
Q 024300 87 YTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYV 121 (269)
Q Consensus 87 ~~~i~~G~l~~~~~~~~i~~~l~~~k~~~~~~~vv 121 (269)
.|++.+-.- ...+.+.++++.+|++ ++-++
T Consensus 78 ldvvvivtt---ddkewikdfieeaker--gvevf 107 (162)
T 2l82_A 78 LDVVVIVTT---DDKEWIKDFIEEAKER--GVEVF 107 (162)
T ss_dssp CCEEEEEEC---CCHHHHHHHHHHHHHT--TCEEE
T ss_pred CcEEEEEec---CcHHHHHHHHHHHHhc--CcEEE
Confidence 455554442 3456788999999998 65543
No 131
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=20.19 E-value=1.2e+02 Score=26.27 Aligned_cols=40 Identities=8% Similarity=0.159 Sum_probs=28.3
Q ss_pred cccEEEEcccCChhh----HHHHHHHHHHHHhcCCCceEEEccccc
Q 024300 86 YYTHLLTGYIGSVSF----LNTILQVVEKLRSINPNLIYVCDPVMG 127 (269)
Q Consensus 86 ~~~~i~~G~l~~~~~----~~~i~~~l~~~k~~~~~~~vv~Dp~~~ 127 (269)
.++.|...++..++. .+.+.++++.|++. +..+++|.++.
T Consensus 54 Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~--g~~vi~DVsp~ 97 (385)
T 1x7f_A 54 GFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDN--NMEVILDVAPA 97 (385)
T ss_dssp TEEEEEEEECCC--------HHHHHHHHHHHHT--TCEEEEEECTT
T ss_pred CCCEEEccCCccCCChHHHHHHHHHHHHHHHHC--CCEEEEECCHH
Confidence 366677777544332 35677889999998 99999998775
Done!