Query 024306
Match_columns 269
No_of_seqs 172 out of 1483
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 03:36:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024306.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024306hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0190 FolD 5,10-methylene-te 100.0 3.2E-80 7E-85 551.8 28.1 259 2-268 24-282 (283)
2 PLN02897 tetrahydrofolate dehy 100.0 5.1E-80 1.1E-84 565.8 27.4 265 3-267 81-345 (345)
3 PLN02616 tetrahydrofolate dehy 100.0 8.7E-80 1.9E-84 566.3 28.0 266 3-268 98-363 (364)
4 PRK14171 bifunctional 5,10-met 100.0 4.1E-79 8.9E-84 550.8 28.2 256 4-266 28-283 (288)
5 PRK14168 bifunctional 5,10-met 100.0 8.1E-79 1.7E-83 551.5 27.9 266 3-268 28-297 (297)
6 PLN02516 methylenetetrahydrofo 100.0 1E-78 2.2E-83 550.8 28.3 265 3-267 34-298 (299)
7 PRK14170 bifunctional 5,10-met 100.0 9.2E-79 2E-83 547.5 27.8 254 6-267 29-282 (284)
8 PRK14185 bifunctional 5,10-met 100.0 1.3E-78 2.9E-83 548.6 27.8 261 3-265 26-290 (293)
9 PRK14187 bifunctional 5,10-met 100.0 2E-78 4.2E-83 547.7 27.7 261 4-267 28-288 (294)
10 PRK14166 bifunctional 5,10-met 100.0 2.5E-78 5.4E-83 544.7 28.3 254 6-266 28-281 (282)
11 PRK14169 bifunctional 5,10-met 100.0 2.5E-78 5.5E-83 544.7 28.3 253 6-266 28-280 (282)
12 PRK14182 bifunctional 5,10-met 100.0 3.1E-78 6.7E-83 543.6 27.9 254 5-266 27-281 (282)
13 PRK14180 bifunctional 5,10-met 100.0 4.7E-78 1E-82 542.9 27.4 255 4-266 27-281 (282)
14 PRK14181 bifunctional 5,10-met 100.0 5E-78 1.1E-82 543.4 27.5 259 5-265 23-285 (287)
15 PRK14167 bifunctional 5,10-met 100.0 7.2E-78 1.6E-82 545.2 28.4 261 5-268 28-292 (297)
16 PRK14184 bifunctional 5,10-met 100.0 4.7E-78 1E-82 543.9 26.9 256 4-268 27-286 (286)
17 PRK14190 bifunctional 5,10-met 100.0 7E-78 1.5E-82 542.8 27.8 254 6-267 30-283 (284)
18 PRK14172 bifunctional 5,10-met 100.0 4.6E-78 1E-82 542.0 26.2 248 7-263 31-278 (278)
19 PRK14186 bifunctional 5,10-met 100.0 1E-77 2.2E-82 544.2 27.8 261 3-267 27-287 (297)
20 PRK14177 bifunctional 5,10-met 100.0 1.8E-77 4E-82 539.1 26.4 251 4-266 29-279 (284)
21 PRK14183 bifunctional 5,10-met 100.0 3.6E-77 7.9E-82 536.5 27.8 253 5-265 28-280 (281)
22 PRK14189 bifunctional 5,10-met 100.0 8.5E-77 1.8E-81 536.0 28.2 255 6-268 30-284 (285)
23 PRK14193 bifunctional 5,10-met 100.0 9.3E-77 2E-81 535.0 27.7 253 6-267 30-284 (284)
24 PRK14176 bifunctional 5,10-met 100.0 9.9E-77 2.1E-81 535.1 27.3 253 4-265 34-286 (287)
25 PRK14173 bifunctional 5,10-met 100.0 1.4E-76 3E-81 534.6 27.4 256 5-267 26-283 (287)
26 PRK10792 bifunctional 5,10-met 100.0 1.4E-76 3.1E-81 534.1 27.1 256 4-267 29-284 (285)
27 PRK14191 bifunctional 5,10-met 100.0 1.4E-76 3E-81 534.1 26.9 255 4-266 27-281 (285)
28 PRK14174 bifunctional 5,10-met 100.0 4.8E-76 1.1E-80 533.8 28.3 264 4-267 27-294 (295)
29 PRK14179 bifunctional 5,10-met 100.0 4.3E-76 9.2E-81 531.2 27.3 256 4-267 28-283 (284)
30 PRK14175 bifunctional 5,10-met 100.0 7.3E-76 1.6E-80 530.6 28.0 255 6-268 30-284 (286)
31 PRK14178 bifunctional 5,10-met 100.0 5.4E-75 1.2E-79 522.4 26.8 252 5-265 23-274 (279)
32 PRK14194 bifunctional 5,10-met 100.0 1.8E-74 3.9E-79 523.9 28.5 257 6-267 31-287 (301)
33 PRK14188 bifunctional 5,10-met 100.0 5.3E-73 1.1E-77 514.9 28.4 260 5-266 29-289 (296)
34 KOG4230 C1-tetrahydrofolate sy 100.0 2.8E-72 6E-77 531.5 24.1 263 4-266 30-292 (935)
35 PRK14192 bifunctional 5,10-met 100.0 1.1E-71 2.4E-76 505.2 26.8 255 4-267 29-283 (283)
36 KOG0089 Methylenetetrahydrofol 100.0 1.2E-67 2.7E-72 463.0 22.2 267 1-267 31-307 (309)
37 PF02882 THF_DHG_CYH_C: Tetrah 100.0 7.9E-49 1.7E-53 327.7 13.1 160 99-265 1-160 (160)
38 cd01079 NAD_bind_m-THF_DH NAD 100.0 1E-42 2.2E-47 297.0 14.7 157 91-265 1-195 (197)
39 cd01080 NAD_bind_m-THF_DH_Cycl 100.0 1.4E-39 3.1E-44 274.6 14.6 168 91-263 1-168 (168)
40 cd05212 NAD_bind_m-THF_DH_Cycl 100.0 4.3E-38 9.4E-43 257.9 13.9 137 111-262 3-139 (140)
41 PRK12549 shikimate 5-dehydroge 100.0 3.3E-34 7.2E-39 260.8 18.5 223 14-268 9-267 (284)
42 PRK12749 quinate/shikimate deh 100.0 8E-34 1.7E-38 258.6 15.8 218 15-269 12-274 (288)
43 PRK12548 shikimate 5-dehydroge 100.0 2.2E-33 4.8E-38 256.0 17.9 220 15-268 14-276 (289)
44 PRK14027 quinate/shikimate deh 100.0 1.1E-33 2.4E-38 257.0 15.4 223 15-269 9-270 (283)
45 COG0169 AroE Shikimate 5-dehyd 100.0 1.3E-33 2.8E-38 255.7 15.4 220 15-268 11-266 (283)
46 TIGR01809 Shik-DH-AROM shikima 100.0 5.1E-33 1.1E-37 252.7 18.4 223 12-268 7-271 (282)
47 PRK12550 shikimate 5-dehydroge 100.0 6.8E-33 1.5E-37 250.6 17.8 230 1-268 1-256 (272)
48 PRK00258 aroE shikimate 5-dehy 100.0 1.5E-32 3.2E-37 249.1 15.5 220 15-268 10-261 (278)
49 TIGR00507 aroE shikimate 5-deh 100.0 2.3E-31 5E-36 240.3 15.2 220 15-268 5-254 (270)
50 PLN02520 bifunctional 3-dehydr 100.0 1.7E-29 3.7E-34 247.4 14.7 219 15-269 257-516 (529)
51 PRK09310 aroDE bifunctional 3- 100.0 2.3E-28 4.9E-33 236.8 15.4 217 15-268 220-456 (477)
52 PF00763 THF_DHG_CYH: Tetrahyd 99.9 4.2E-26 9E-31 181.9 10.4 91 6-96 27-117 (117)
53 PRK08306 dipicolinate synthase 99.6 2.5E-15 5.5E-20 137.7 10.8 130 119-263 134-286 (296)
54 TIGR02853 spore_dpaA dipicolin 99.6 1.4E-14 3E-19 132.2 10.8 129 118-262 132-284 (287)
55 cd01065 NAD_bind_Shikimate_DH 99.5 2.6E-13 5.6E-18 111.7 12.7 129 118-267 1-155 (155)
56 PF01488 Shikimate_DH: Shikima 99.4 2.1E-13 4.6E-18 111.0 4.6 88 127-215 3-116 (135)
57 COG0373 HemA Glutamyl-tRNA red 99.3 8.5E-12 1.8E-16 118.3 7.0 165 85-266 138-330 (414)
58 cd05311 NAD_bind_2_malic_enz N 99.2 6.3E-11 1.4E-15 104.7 8.0 93 119-214 8-133 (226)
59 PRK13940 glutamyl-tRNA reducta 99.2 1.1E-10 2.4E-15 111.6 9.5 143 119-267 164-330 (414)
60 cd05191 NAD_bind_amino_acid_DH 99.2 1.2E-10 2.7E-15 87.5 7.7 78 118-208 1-86 (86)
61 cd01078 NAD_bind_H4MPT_DH NADP 99.1 7.7E-10 1.7E-14 95.0 11.1 96 119-214 7-135 (194)
62 PF00670 AdoHcyase_NAD: S-aden 99.1 3.9E-10 8.6E-15 94.4 7.5 91 121-212 7-114 (162)
63 PRK14982 acyl-ACP reductase; P 99.0 4.2E-09 9.1E-14 98.2 11.7 90 127-216 146-254 (340)
64 PF08501 Shikimate_dh_N: Shiki 99.0 6E-10 1.3E-14 83.4 3.9 78 19-103 4-82 (83)
65 PTZ00075 Adenosylhomocysteinas 98.9 2.5E-09 5.4E-14 103.3 7.2 111 127-240 245-371 (476)
66 PRK00676 hemA glutamyl-tRNA re 98.9 7.7E-09 1.7E-13 96.2 9.2 94 120-215 159-268 (338)
67 PLN00203 glutamyl-tRNA reducta 98.8 1.9E-08 4.1E-13 98.8 8.6 143 119-267 247-426 (519)
68 PRK00045 hemA glutamyl-tRNA re 98.7 3.8E-08 8.2E-13 94.6 8.1 96 119-215 165-287 (423)
69 TIGR01035 hemA glutamyl-tRNA r 98.7 4.6E-08 9.9E-13 93.9 7.2 142 120-267 164-334 (417)
70 PRK05476 S-adenosyl-L-homocyst 98.6 1.5E-07 3.2E-12 90.3 8.8 92 119-211 194-302 (425)
71 TIGR00936 ahcY adenosylhomocys 98.5 4.3E-07 9.3E-12 86.7 9.1 93 119-212 177-286 (406)
72 cd05213 NAD_bind_Glutamyl_tRNA 98.5 3.5E-07 7.5E-12 84.5 8.1 95 120-215 162-280 (311)
73 COG0499 SAM1 S-adenosylhomocys 98.5 3.3E-07 7.1E-12 85.1 7.7 90 119-209 191-297 (420)
74 COG5322 Predicted dehydrogenas 98.5 4.6E-07 9.9E-12 81.2 8.0 149 66-214 70-267 (351)
75 PLN02928 oxidoreductase family 98.4 2E-06 4.4E-11 80.7 11.8 134 132-266 155-335 (347)
76 TIGR00518 alaDH alanine dehydr 98.4 6.7E-07 1.4E-11 84.6 6.9 124 134-263 165-320 (370)
77 TIGR02992 ectoine_eutC ectoine 98.3 1.7E-06 3.6E-11 80.5 8.5 91 117-210 112-226 (326)
78 cd00401 AdoHcyase S-adenosyl-L 98.3 2.1E-06 4.6E-11 82.2 9.3 92 119-211 184-292 (413)
79 PF02826 2-Hacid_dh_C: D-isome 98.3 1.1E-06 2.5E-11 74.6 6.5 82 130-212 30-131 (178)
80 PLN02494 adenosylhomocysteinas 98.3 1.8E-06 3.8E-11 83.6 8.4 90 119-209 236-342 (477)
81 PRK00257 erythronate-4-phospha 98.3 1.3E-05 2.9E-10 76.0 13.3 142 126-268 106-280 (381)
82 PRK15438 erythronate-4-phospha 98.3 1.5E-05 3.3E-10 75.6 13.4 141 127-268 107-280 (378)
83 PRK08291 ectoine utilization p 98.2 4.9E-06 1.1E-10 77.4 8.1 91 117-210 115-229 (330)
84 PRK13243 glyoxylate reductase; 98.2 1.8E-05 3.9E-10 73.8 11.9 134 132-266 146-312 (333)
85 COG0686 Ald Alanine dehydrogen 98.2 2.1E-06 4.6E-11 78.5 5.1 77 134-211 166-271 (371)
86 TIGR00561 pntA NAD(P) transhyd 98.1 1.1E-05 2.4E-10 79.1 9.2 90 121-211 139-287 (511)
87 cd01075 NAD_bind_Leu_Phe_Val_D 98.1 9.8E-06 2.1E-10 70.3 7.9 95 117-213 3-120 (200)
88 PRK07574 formate dehydrogenase 98.1 2.6E-05 5.6E-10 74.2 10.2 134 132-266 188-357 (385)
89 PRK06718 precorrin-2 dehydroge 98.0 8.3E-06 1.8E-10 70.9 5.6 113 132-260 6-142 (202)
90 PRK08618 ornithine cyclodeamin 98.0 3.7E-05 8E-10 71.4 9.3 75 134-210 125-223 (325)
91 PRK15409 bifunctional glyoxyla 98.0 7.8E-05 1.7E-09 69.4 11.4 135 131-266 140-309 (323)
92 COG0281 SfcA Malic enzyme [Ene 98.0 0.00013 2.7E-09 69.4 12.6 172 22-212 99-303 (432)
93 PRK06932 glycerate dehydrogena 97.9 2.5E-05 5.4E-10 72.4 7.4 134 132-266 143-310 (314)
94 PRK06436 glycerate dehydrogena 97.9 2.5E-05 5.5E-10 72.0 7.3 82 132-214 118-215 (303)
95 PRK06487 glycerate dehydrogena 97.9 3.3E-05 7.2E-10 71.6 7.7 134 132-266 144-308 (317)
96 PRK09424 pntA NAD(P) transhydr 97.9 4.7E-05 1E-09 74.8 8.9 90 121-211 140-288 (509)
97 PRK06141 ornithine cyclodeamin 97.9 6.4E-05 1.4E-09 69.6 9.4 76 133-210 122-220 (314)
98 PRK08410 2-hydroxyacid dehydro 97.9 3.9E-05 8.5E-10 71.0 7.9 134 132-266 141-307 (311)
99 PLN03139 formate dehydrogenase 97.9 0.00011 2.4E-09 69.9 11.0 134 132-266 195-364 (386)
100 PRK07232 bifunctional malic en 97.9 0.00017 3.6E-09 73.9 12.7 167 25-212 88-287 (752)
101 PRK12862 malic enzyme; Reviewe 97.9 6.7E-05 1.5E-09 77.0 9.8 167 25-212 96-295 (763)
102 KOG1370 S-adenosylhomocysteine 97.9 2.7E-05 5.8E-10 71.2 6.0 81 130-211 208-304 (434)
103 PRK08605 D-lactate dehydrogena 97.9 4.1E-05 8.9E-10 71.4 7.5 80 132-212 142-240 (332)
104 PRK07340 ornithine cyclodeamin 97.8 0.0001 2.2E-09 68.0 9.6 77 132-210 121-219 (304)
105 PRK15469 ghrA bifunctional gly 97.8 4.1E-05 9E-10 70.9 7.1 82 132-214 132-232 (312)
106 PF01262 AlaDh_PNT_C: Alanine 97.8 1.1E-05 2.4E-10 67.8 2.9 78 133-211 17-142 (168)
107 PRK12480 D-lactate dehydrogena 97.8 6.3E-05 1.4E-09 70.2 7.8 81 132-213 142-239 (330)
108 PLN02306 hydroxypyruvate reduc 97.8 6.4E-05 1.4E-09 71.6 7.3 134 132-266 161-344 (386)
109 PF03446 NAD_binding_2: NAD bi 97.8 4.1E-05 8.8E-10 64.0 5.1 74 137-211 2-97 (163)
110 COG0111 SerA Phosphoglycerate 97.7 6.8E-05 1.5E-09 69.8 6.9 135 131-266 137-306 (324)
111 PRK12861 malic enzyme; Reviewe 97.7 8.4E-05 1.8E-09 76.0 7.5 166 26-212 93-291 (764)
112 PF13241 NAD_binding_7: Putati 97.7 6.3E-05 1.4E-09 58.2 4.9 59 132-191 3-72 (103)
113 PRK11790 D-3-phosphoglycerate 97.6 0.00015 3.3E-09 69.6 7.8 80 132-212 147-243 (409)
114 TIGR01327 PGDH D-3-phosphoglyc 97.6 0.00017 3.7E-09 71.3 8.0 82 131-213 133-234 (525)
115 PRK13581 D-3-phosphoglycerate 97.6 0.00019 4.2E-09 71.0 7.7 81 132-213 136-235 (526)
116 COG1748 LYS9 Saccharopine dehy 97.6 0.00015 3.3E-09 68.8 6.8 112 137-262 2-141 (389)
117 PRK06719 precorrin-2 dehydroge 97.5 0.00015 3.3E-09 60.5 5.4 116 132-262 9-144 (157)
118 COG1052 LdhA Lactate dehydroge 97.5 0.00027 5.9E-09 65.8 7.2 82 132-214 142-242 (324)
119 COG2084 MmsB 3-hydroxyisobutyr 97.5 0.00035 7.5E-09 63.9 7.2 73 137-210 1-97 (286)
120 PRK14619 NAD(P)H-dependent gly 97.4 0.00032 7E-09 64.5 6.8 73 135-208 3-82 (308)
121 PF01210 NAD_Gly3P_dh_N: NAD-d 97.4 0.00028 6E-09 58.7 5.4 69 138-207 1-102 (157)
122 PRK11199 tyrA bifunctional cho 97.4 0.00035 7.5E-09 66.3 6.5 73 135-210 97-177 (374)
123 KOG0069 Glyoxylate/hydroxypyru 97.4 0.00034 7.3E-09 65.2 5.9 80 132-212 158-257 (336)
124 PRK06823 ornithine cyclodeamin 97.4 0.00056 1.2E-08 63.5 7.4 75 135-210 127-224 (315)
125 TIGR02371 ala_DH_arch alanine 97.3 0.00056 1.2E-08 63.6 7.3 75 135-210 127-224 (325)
126 PF03807 F420_oxidored: NADP o 97.3 0.00021 4.5E-09 53.9 3.3 70 138-208 1-94 (96)
127 PRK06407 ornithine cyclodeamin 97.3 0.00065 1.4E-08 62.6 7.2 75 135-210 116-214 (301)
128 cd05312 NAD_bind_1_malic_enz N 97.3 0.00052 1.1E-08 62.5 6.0 92 119-212 8-143 (279)
129 PF02423 OCD_Mu_crystall: Orni 97.2 0.0007 1.5E-08 62.7 6.6 75 135-210 127-226 (313)
130 TIGR01470 cysG_Nterm siroheme 97.2 0.00063 1.4E-08 59.3 5.9 58 132-190 5-80 (205)
131 cd00762 NAD_bind_malic_enz NAD 97.2 0.0005 1.1E-08 61.8 5.1 92 119-212 8-144 (254)
132 PRK06046 alanine dehydrogenase 97.2 0.0009 2E-08 62.2 7.0 74 135-210 128-225 (326)
133 PF03949 Malic_M: Malic enzyme 97.2 0.00043 9.4E-09 62.2 4.7 92 119-212 8-144 (255)
134 PRK14804 ornithine carbamoyltr 97.1 0.017 3.8E-07 53.5 14.9 141 28-186 60-225 (311)
135 PRK13814 pyrB aspartate carbam 97.1 0.013 2.9E-07 54.3 14.0 141 28-185 62-223 (310)
136 PRK07589 ornithine cyclodeamin 97.1 0.0014 3E-08 61.7 7.5 75 135-210 128-227 (346)
137 COG0287 TyrA Prephenate dehydr 97.1 0.0012 2.6E-08 60.3 6.6 73 136-210 3-100 (279)
138 PF07991 IlvN: Acetohydroxy ac 97.1 0.00095 2.1E-08 56.0 5.3 54 134-188 2-69 (165)
139 COG2085 Predicted dinucleotide 97.1 0.00083 1.8E-08 58.6 5.1 73 137-212 2-96 (211)
140 TIGR01505 tartro_sem_red 2-hyd 97.1 0.0012 2.5E-08 60.1 6.4 72 138-210 1-95 (291)
141 PLN02712 arogenate dehydrogena 97.1 0.0012 2.5E-08 67.2 6.9 80 130-210 363-462 (667)
142 PRK13529 malate dehydrogenase; 97.1 0.003 6.5E-08 62.5 9.3 93 118-212 277-420 (563)
143 PLN02256 arogenate dehydrogena 97.1 0.0017 3.7E-08 59.9 7.3 82 127-209 27-128 (304)
144 PRK01438 murD UDP-N-acetylmura 97.0 0.0024 5.3E-08 62.1 8.6 43 127-170 7-49 (480)
145 PRK11559 garR tartronate semia 97.0 0.0017 3.7E-08 59.1 6.9 74 137-211 3-99 (296)
146 PRK01713 ornithine carbamoyltr 97.0 0.013 2.8E-07 54.8 12.9 141 28-186 63-232 (334)
147 PRK04284 ornithine carbamoyltr 97.0 0.018 3.9E-07 53.9 13.6 141 28-186 62-231 (332)
148 PRK03515 ornithine carbamoyltr 97.0 0.017 3.8E-07 54.1 13.4 141 28-186 62-232 (336)
149 COG1648 CysG Siroheme synthase 97.0 0.001 2.2E-08 58.3 4.7 116 132-262 8-147 (210)
150 PRK15461 NADH-dependent gamma- 97.0 0.0016 3.4E-08 59.7 6.1 74 137-211 2-98 (296)
151 TIGR00670 asp_carb_tr aspartat 97.0 0.024 5.2E-07 52.3 13.7 141 28-186 56-223 (301)
152 PRK05579 bifunctional phosphop 96.9 0.0057 1.2E-07 58.6 9.9 95 117-211 167-305 (399)
153 PRK00856 pyrB aspartate carbam 96.9 0.023 4.9E-07 52.6 13.4 144 27-187 61-221 (305)
154 PLN03129 NADP-dependent malic 96.9 0.0033 7.1E-08 62.4 8.0 93 118-212 303-439 (581)
155 PRK07502 cyclohexadienyl dehyd 96.9 0.002 4.4E-08 59.1 6.1 73 136-209 6-101 (307)
156 PRK02102 ornithine carbamoyltr 96.9 0.023 4.9E-07 53.2 13.0 141 28-186 63-231 (331)
157 PRK05562 precorrin-2 dehydroge 96.9 0.0026 5.6E-08 56.2 6.4 59 132-191 21-97 (223)
158 PF00056 Ldh_1_N: lactate/mala 96.8 0.0026 5.7E-08 52.0 5.9 53 138-190 2-80 (141)
159 PRK12562 ornithine carbamoyltr 96.8 0.026 5.7E-07 52.8 13.2 142 28-187 62-233 (334)
160 PLN02342 ornithine carbamoyltr 96.8 0.023 5.1E-07 53.4 12.9 141 28-187 102-267 (348)
161 PRK13403 ketol-acid reductoiso 96.8 0.0023 4.9E-08 59.6 6.0 71 133-204 13-102 (335)
162 PRK02255 putrescine carbamoylt 96.8 0.037 8E-07 51.9 14.0 141 28-186 59-229 (338)
163 TIGR00658 orni_carb_tr ornithi 96.8 0.03 6.5E-07 51.7 13.0 140 28-186 56-223 (304)
164 PLN02527 aspartate carbamoyltr 96.8 0.038 8.1E-07 51.2 13.5 143 27-187 55-226 (306)
165 PRK06545 prephenate dehydrogen 96.8 0.0027 5.8E-08 59.8 6.0 73 137-210 1-97 (359)
166 cd05291 HicDH_like L-2-hydroxy 96.8 0.0032 7E-08 58.0 6.4 53 137-190 1-79 (306)
167 PRK07417 arogenate dehydrogena 96.7 0.0015 3.3E-08 59.2 4.1 72 138-210 2-93 (279)
168 PRK14805 ornithine carbamoyltr 96.7 0.029 6.3E-07 51.8 12.3 140 28-187 55-222 (302)
169 KOG2017 Molybdopterin synthase 96.7 0.011 2.3E-07 55.2 9.1 34 132-166 62-96 (427)
170 COG2423 Predicted ornithine cy 96.7 0.0061 1.3E-07 56.9 7.7 75 135-210 129-227 (330)
171 PRK00779 ornithine carbamoyltr 96.7 0.037 8.1E-07 51.1 12.8 140 28-186 60-224 (304)
172 PF13460 NAD_binding_10: NADH( 96.7 0.0029 6.4E-08 52.7 5.1 51 139-189 1-70 (183)
173 PRK08818 prephenate dehydrogen 96.7 0.0033 7.2E-08 59.6 5.9 76 135-210 3-90 (370)
174 PRK11891 aspartate carbamoyltr 96.7 0.048 1E-06 52.7 13.8 144 28-188 143-317 (429)
175 PRK05479 ketol-acid reductoiso 96.6 0.0042 9.2E-08 58.0 6.3 70 134-204 15-104 (330)
176 PRK14106 murD UDP-N-acetylmura 96.6 0.0041 8.8E-08 59.8 6.5 37 133-170 2-38 (450)
177 PF01118 Semialdhyde_dh: Semia 96.6 0.002 4.4E-08 51.0 3.7 75 138-212 1-101 (121)
178 PRK08655 prephenate dehydrogen 96.6 0.0041 9E-08 60.2 6.3 71 138-209 2-93 (437)
179 PF02737 3HCDH_N: 3-hydroxyacy 96.6 0.0043 9.4E-08 52.8 5.7 49 138-188 1-87 (180)
180 TIGR03316 ygeW probable carbam 96.6 0.055 1.2E-06 51.1 13.5 150 28-187 59-253 (357)
181 PRK11064 wecC UDP-N-acetyl-D-m 96.6 0.0042 9.1E-08 59.7 6.0 74 137-211 4-122 (415)
182 TIGR01692 HIBADH 3-hydroxyisob 96.6 0.004 8.7E-08 56.7 5.6 69 141-210 1-92 (288)
183 PRK09260 3-hydroxybutyryl-CoA 96.5 0.0051 1.1E-07 56.0 6.1 72 137-209 2-119 (288)
184 PRK06199 ornithine cyclodeamin 96.5 0.006 1.3E-07 58.0 6.7 75 135-210 154-261 (379)
185 PRK07679 pyrroline-5-carboxyla 96.5 0.0056 1.2E-07 55.4 6.2 71 136-207 3-98 (279)
186 PRK12490 6-phosphogluconate de 96.5 0.0068 1.5E-07 55.5 6.6 72 138-210 2-96 (299)
187 PRK15059 tartronate semialdehy 96.5 0.0097 2.1E-07 54.5 7.5 72 138-210 2-95 (292)
188 PRK06398 aldose dehydrogenase; 96.5 0.0071 1.5E-07 53.6 6.4 37 133-169 3-39 (258)
189 PRK14618 NAD(P)H-dependent gly 96.5 0.0049 1.1E-07 57.1 5.5 72 137-209 5-105 (328)
190 PRK12491 pyrroline-5-carboxyla 96.4 0.0059 1.3E-07 55.4 5.7 72 137-209 3-98 (272)
191 PRK08192 aspartate carbamoyltr 96.4 0.068 1.5E-06 50.2 12.9 143 28-187 61-234 (338)
192 PRK08223 hypothetical protein; 96.4 0.007 1.5E-07 55.4 5.9 34 133-167 24-58 (287)
193 TIGR02354 thiF_fam2 thiamine b 96.4 0.0062 1.3E-07 52.8 5.4 35 133-168 18-53 (200)
194 PRK06949 short chain dehydroge 96.4 0.0055 1.2E-07 53.7 5.0 38 132-169 5-42 (258)
195 PRK06523 short chain dehydroge 96.3 0.0091 2E-07 52.5 6.4 38 132-169 5-42 (260)
196 PF10727 Rossmann-like: Rossma 96.3 0.0056 1.2E-07 49.4 4.6 72 136-208 10-104 (127)
197 TIGR00465 ilvC ketol-acid redu 96.3 0.0088 1.9E-07 55.5 6.4 55 134-189 1-69 (314)
198 PRK02472 murD UDP-N-acetylmura 96.3 0.0088 1.9E-07 57.5 6.6 35 134-169 3-37 (447)
199 COG0078 ArgF Ornithine carbamo 96.3 0.019 4.1E-07 52.8 8.3 141 29-187 62-229 (310)
200 TIGR02356 adenyl_thiF thiazole 96.3 0.0065 1.4E-07 52.7 5.1 35 133-168 18-53 (202)
201 PRK08293 3-hydroxybutyryl-CoA 96.3 0.0096 2.1E-07 54.1 6.4 52 137-189 4-94 (287)
202 PTZ00317 NADP-dependent malic 96.3 0.0096 2.1E-07 58.9 6.7 93 118-212 279-419 (559)
203 TIGR02355 moeB molybdopterin s 96.3 0.0067 1.5E-07 54.1 5.0 34 133-167 21-55 (240)
204 PRK12367 short chain dehydroge 96.2 0.0098 2.1E-07 52.8 6.0 57 133-189 11-89 (245)
205 PRK09599 6-phosphogluconate de 96.2 0.012 2.7E-07 53.8 6.7 72 138-210 2-96 (301)
206 PRK06550 fabG 3-ketoacyl-(acyl 96.2 0.011 2.5E-07 51.0 6.2 57 133-189 2-77 (235)
207 TIGR00872 gnd_rel 6-phosphoglu 96.2 0.0093 2E-07 54.7 5.7 72 138-210 2-95 (298)
208 cd01076 NAD_bind_1_Glu_DH NAD( 96.2 0.015 3.3E-07 51.4 6.7 52 116-168 7-63 (227)
209 PRK08507 prephenate dehydrogen 96.2 0.013 2.9E-07 52.9 6.5 69 138-210 2-93 (275)
210 TIGR03026 NDP-sugDHase nucleot 96.2 0.015 3.3E-07 55.6 7.2 72 138-210 2-122 (411)
211 cd05211 NAD_bind_Glu_Leu_Phe_V 96.2 0.015 3.3E-07 51.1 6.6 48 121-169 8-56 (217)
212 cd01492 Aos1_SUMO Ubiquitin ac 96.1 0.023 5.1E-07 49.1 7.7 36 133-169 18-54 (197)
213 cd00757 ThiF_MoeB_HesA_family 96.1 0.0048 1E-07 54.4 3.5 34 133-167 18-52 (228)
214 PRK12475 thiamine/molybdopteri 96.1 0.0089 1.9E-07 56.0 5.4 35 133-168 21-56 (338)
215 PLN02819 lysine-ketoglutarate 96.1 0.0048 1E-07 65.4 3.9 115 135-262 568-721 (1042)
216 PLN02586 probable cinnamyl alc 96.1 0.021 4.5E-07 53.5 7.9 92 118-210 166-280 (360)
217 PLN02688 pyrroline-5-carboxyla 96.1 0.013 2.8E-07 52.4 6.2 68 138-207 2-94 (266)
218 PRK09072 short chain dehydroge 96.1 0.0084 1.8E-07 53.0 4.9 37 133-169 2-38 (263)
219 PRK00094 gpsA NAD(P)H-dependen 96.1 0.013 2.9E-07 53.6 6.3 70 138-208 3-105 (325)
220 PRK07200 aspartate/ornithine c 96.1 0.14 3E-06 49.1 13.2 151 28-187 76-270 (395)
221 PRK05690 molybdopterin biosynt 96.0 0.01 2.2E-07 53.1 5.1 34 133-167 29-63 (245)
222 cd05313 NAD_bind_2_Glu_DH NAD( 96.0 0.019 4E-07 51.8 6.7 54 114-168 12-70 (254)
223 PRK12828 short chain dehydroge 96.0 0.0089 1.9E-07 51.4 4.5 38 133-170 4-41 (239)
224 PRK00141 murD UDP-N-acetylmura 96.0 0.013 2.9E-07 57.1 6.2 38 132-170 11-48 (473)
225 COG2910 Putative NADH-flavin r 96.0 0.015 3.3E-07 50.0 5.6 54 137-190 1-73 (211)
226 PLN02712 arogenate dehydrogena 96.0 0.013 2.7E-07 59.8 6.1 75 134-209 50-144 (667)
227 PRK07523 gluconate 5-dehydroge 96.0 0.0088 1.9E-07 52.5 4.5 37 133-169 7-43 (255)
228 PRK07424 bifunctional sterol d 96.0 0.016 3.4E-07 55.7 6.3 38 132-169 174-211 (406)
229 PRK01710 murD UDP-N-acetylmura 95.9 0.018 3.9E-07 55.8 6.7 35 134-169 12-46 (458)
230 PRK08644 thiamine biosynthesis 95.9 0.013 2.9E-07 51.2 5.3 35 133-168 25-60 (212)
231 TIGR01832 kduD 2-deoxy-D-gluco 95.9 0.012 2.7E-07 51.2 5.1 37 133-169 2-38 (248)
232 PRK06171 sorbitol-6-phosphate 95.9 0.02 4.2E-07 50.7 6.4 37 133-169 6-42 (266)
233 PTZ00117 malate dehydrogenase; 95.9 0.026 5.6E-07 52.4 7.4 55 134-190 3-84 (319)
234 PRK05866 short chain dehydroge 95.9 0.014 3.1E-07 53.0 5.5 39 131-169 35-73 (293)
235 PRK08862 short chain dehydroge 95.9 0.0085 1.8E-07 52.5 3.9 38 133-170 2-39 (227)
236 PRK03369 murD UDP-N-acetylmura 95.9 0.015 3.3E-07 56.9 6.0 35 134-169 10-44 (488)
237 CHL00194 ycf39 Ycf39; Provisio 95.9 0.015 3.3E-07 53.2 5.7 51 138-188 2-73 (317)
238 PRK00066 ldh L-lactate dehydro 95.9 0.019 4.1E-07 53.3 6.3 55 135-190 5-84 (315)
239 PRK08762 molybdopterin biosynt 95.9 0.012 2.6E-07 55.7 5.0 35 133-168 132-167 (376)
240 PF00899 ThiF: ThiF family; I 95.9 0.0088 1.9E-07 48.1 3.5 34 135-169 1-35 (135)
241 PRK07231 fabG 3-ketoacyl-(acyl 95.8 0.0099 2.1E-07 51.7 4.0 38 133-170 2-39 (251)
242 PRK06130 3-hydroxybutyryl-CoA 95.8 0.019 4.2E-07 52.5 6.1 52 137-189 5-89 (311)
243 PRK06124 gluconate 5-dehydroge 95.8 0.0092 2E-07 52.4 3.8 38 132-169 7-44 (256)
244 PRK00421 murC UDP-N-acetylmura 95.8 0.026 5.7E-07 54.7 7.3 122 134-262 5-132 (461)
245 PLN00141 Tic62-NAD(P)-related 95.8 0.021 4.6E-07 50.4 6.1 37 133-169 14-50 (251)
246 PRK07819 3-hydroxybutyryl-CoA 95.8 0.023 5E-07 51.9 6.4 32 137-169 6-37 (286)
247 COG1004 Ugd Predicted UDP-gluc 95.8 0.094 2E-06 50.0 10.5 124 79-207 231-407 (414)
248 COG3288 PntA NAD/NADP transhyd 95.8 0.0082 1.8E-07 55.2 3.3 90 121-211 139-284 (356)
249 COG0569 TrkA K+ transport syst 95.8 0.014 3.1E-07 51.5 4.8 52 137-189 1-76 (225)
250 KOG1198 Zinc-binding oxidoredu 95.8 0.054 1.2E-06 51.0 9.0 76 116-191 132-237 (347)
251 PTZ00082 L-lactate dehydrogena 95.8 0.032 6.9E-07 51.9 7.3 55 134-190 4-85 (321)
252 PF03435 Saccharop_dh: Sacchar 95.8 0.0054 1.2E-07 58.0 2.2 112 139-263 1-141 (386)
253 COG1086 Predicted nucleoside-d 95.7 0.094 2E-06 52.0 10.7 135 29-189 169-335 (588)
254 PRK08085 gluconate 5-dehydroge 95.7 0.011 2.3E-07 52.0 3.9 37 133-169 6-42 (254)
255 cd00650 LDH_MDH_like NAD-depen 95.7 0.024 5.3E-07 50.9 6.3 52 139-190 1-81 (263)
256 PRK06172 short chain dehydroge 95.7 0.01 2.3E-07 51.9 3.8 37 133-169 4-40 (253)
257 PLN02353 probable UDP-glucose 95.7 0.095 2.1E-06 51.4 10.8 154 24-206 228-445 (473)
258 PLN02545 3-hydroxybutyryl-CoA 95.7 0.016 3.5E-07 52.8 5.1 32 137-169 5-36 (295)
259 PF03721 UDPG_MGDP_dh_N: UDP-g 95.7 0.013 2.9E-07 50.1 4.3 53 137-190 1-87 (185)
260 PRK08628 short chain dehydroge 95.7 0.017 3.6E-07 50.8 5.0 39 131-169 2-40 (258)
261 PRK07066 3-hydroxybutyryl-CoA 95.7 0.029 6.2E-07 52.3 6.8 51 137-188 8-92 (321)
262 PRK05600 thiamine biosynthesis 95.7 0.017 3.7E-07 54.8 5.3 34 133-167 38-72 (370)
263 PRK08339 short chain dehydroge 95.7 0.014 3.1E-07 51.9 4.5 38 132-169 4-41 (263)
264 PLN02477 glutamate dehydrogena 95.7 0.028 6E-07 54.1 6.7 159 9-169 64-239 (410)
265 PRK05597 molybdopterin biosynt 95.7 0.018 3.9E-07 54.3 5.3 34 133-167 25-59 (355)
266 PF05368 NmrA: NmrA-like famil 95.7 0.016 3.5E-07 50.4 4.7 51 139-189 1-74 (233)
267 PRK06035 3-hydroxyacyl-CoA deh 95.7 0.017 3.8E-07 52.5 5.1 32 137-169 4-35 (291)
268 PRK06138 short chain dehydroge 95.7 0.015 3.3E-07 50.6 4.6 37 133-169 2-38 (252)
269 PRK06841 short chain dehydroge 95.6 0.02 4.3E-07 50.1 5.3 38 132-169 11-48 (255)
270 PRK09880 L-idonate 5-dehydroge 95.6 0.044 9.5E-07 50.7 7.7 85 124-210 159-268 (343)
271 PRK07062 short chain dehydroge 95.6 0.014 3E-07 51.6 4.2 38 132-169 4-41 (265)
272 PRK05717 oxidoreductase; Valid 95.6 0.02 4.4E-07 50.3 5.2 39 131-169 5-43 (255)
273 TIGR03589 PseB UDP-N-acetylglu 95.6 0.021 4.6E-07 52.6 5.5 56 134-189 2-84 (324)
274 PRK12829 short chain dehydroge 95.6 0.018 3.8E-07 50.6 4.8 38 132-169 7-44 (264)
275 PRK14031 glutamate dehydrogena 95.6 0.028 6E-07 54.6 6.4 52 114-166 202-257 (444)
276 TIGR01915 npdG NADPH-dependent 95.6 0.031 6.6E-07 48.8 6.1 69 138-208 2-101 (219)
277 PLN02986 cinnamyl-alcohol dehy 95.6 0.036 7.8E-07 50.6 6.8 36 134-169 3-38 (322)
278 PRK07063 short chain dehydroge 95.6 0.014 2.9E-07 51.5 3.9 37 133-169 4-40 (260)
279 TIGR03325 BphB_TodD cis-2,3-di 95.6 0.018 3.9E-07 50.9 4.7 37 133-169 2-38 (262)
280 PRK05867 short chain dehydroge 95.6 0.017 3.7E-07 50.7 4.5 37 133-169 6-42 (253)
281 PRK06057 short chain dehydroge 95.6 0.018 3.8E-07 50.7 4.6 36 134-169 5-40 (255)
282 PRK07890 short chain dehydroge 95.6 0.017 3.7E-07 50.6 4.5 36 134-169 3-38 (258)
283 PRK07688 thiamine/molybdopteri 95.6 0.021 4.5E-07 53.6 5.3 35 133-168 21-56 (339)
284 PRK08265 short chain dehydroge 95.5 0.017 3.6E-07 51.2 4.4 37 133-169 3-39 (261)
285 PRK06129 3-hydroxyacyl-CoA deh 95.5 0.029 6.2E-07 51.6 6.1 52 137-189 3-92 (308)
286 PRK14874 aspartate-semialdehyd 95.5 0.015 3.3E-07 54.3 4.3 76 136-211 1-97 (334)
287 PRK10637 cysG siroheme synthas 95.5 0.026 5.6E-07 55.0 6.0 58 132-190 8-83 (457)
288 PRK08220 2,3-dihydroxybenzoate 95.5 0.032 7E-07 48.6 6.1 38 132-169 4-41 (252)
289 PRK04523 N-acetylornithine car 95.5 0.28 6E-06 46.0 12.6 146 28-187 55-252 (335)
290 PLN02968 Probable N-acetyl-gam 95.5 0.018 3.9E-07 54.9 4.6 76 135-212 37-138 (381)
291 PRK06182 short chain dehydroge 95.5 0.024 5.3E-07 50.4 5.3 35 135-169 2-36 (273)
292 PLN02858 fructose-bisphosphate 95.5 0.023 4.9E-07 62.4 5.9 75 135-210 3-100 (1378)
293 PRK07097 gluconate 5-dehydroge 95.5 0.016 3.5E-07 51.3 4.1 39 131-169 5-43 (265)
294 COG0240 GpsA Glycerol-3-phosph 95.5 0.036 7.7E-07 51.7 6.3 71 137-208 2-105 (329)
295 TIGR02825 B4_12hDH leukotriene 95.4 0.034 7.5E-07 50.7 6.2 86 124-209 127-238 (325)
296 PRK06463 fabG 3-ketoacyl-(acyl 95.4 0.028 6.1E-07 49.4 5.4 37 133-169 4-40 (255)
297 PLN02662 cinnamyl-alcohol dehy 95.4 0.04 8.6E-07 50.0 6.6 35 135-169 3-37 (322)
298 PRK06728 aspartate-semialdehyd 95.4 0.048 1E-06 51.3 7.2 113 135-254 4-138 (347)
299 PRK07530 3-hydroxybutyryl-CoA 95.4 0.024 5.3E-07 51.5 5.1 32 137-169 5-36 (292)
300 PRK06935 2-deoxy-D-gluconate 3 95.4 0.025 5.4E-07 49.8 5.1 38 132-169 11-48 (258)
301 TIGR03366 HpnZ_proposed putati 95.4 0.038 8.2E-07 49.7 6.3 85 123-209 109-219 (280)
302 TIGR01202 bchC 2-desacetyl-2-h 95.4 0.046 1E-06 49.9 7.0 76 134-210 143-233 (308)
303 PRK08703 short chain dehydroge 95.4 0.026 5.6E-07 49.1 5.0 38 133-170 3-40 (239)
304 PLN02989 cinnamyl-alcohol dehy 95.4 0.037 8.1E-07 50.5 6.3 34 135-168 4-37 (325)
305 TIGR00521 coaBC_dfp phosphopan 95.4 0.057 1.2E-06 51.6 7.7 95 117-211 163-303 (390)
306 PRK06179 short chain dehydroge 95.4 0.036 7.8E-07 49.0 6.0 35 135-169 3-37 (270)
307 PLN02427 UDP-apiose/xylose syn 95.4 0.035 7.6E-07 52.2 6.2 58 131-188 9-95 (386)
308 PRK09186 flagellin modificatio 95.4 0.02 4.3E-07 50.1 4.2 36 134-169 2-37 (256)
309 PRK05854 short chain dehydroge 95.3 0.016 3.5E-07 53.1 3.7 38 132-169 10-47 (313)
310 KOG0023 Alcohol dehydrogenase, 95.3 0.025 5.5E-07 52.4 4.9 65 121-187 168-234 (360)
311 PLN02896 cinnamyl-alcohol dehy 95.3 0.031 6.6E-07 51.9 5.6 59 131-189 5-89 (353)
312 cd01487 E1_ThiF_like E1_ThiF_l 95.3 0.04 8.7E-07 46.6 5.8 30 138-168 1-31 (174)
313 PRK07060 short chain dehydroge 95.3 0.024 5.2E-07 49.1 4.6 38 132-169 5-42 (245)
314 PRK06476 pyrroline-5-carboxyla 95.3 0.023 5E-07 50.7 4.6 70 138-208 2-93 (258)
315 PRK08213 gluconate 5-dehydroge 95.3 0.029 6.3E-07 49.4 5.1 38 132-169 8-45 (259)
316 COG0771 MurD UDP-N-acetylmuram 95.3 0.067 1.4E-06 52.0 7.9 124 134-263 5-136 (448)
317 PRK07478 short chain dehydroge 95.3 0.019 4.1E-07 50.4 3.9 37 133-169 3-39 (254)
318 PRK07634 pyrroline-5-carboxyla 95.3 0.039 8.4E-07 48.6 5.8 54 135-189 3-76 (245)
319 PTZ00142 6-phosphogluconate de 95.3 0.037 8.1E-07 54.1 6.2 73 137-210 2-103 (470)
320 KOG1502 Flavonol reductase/cin 95.3 0.048 1E-06 50.8 6.5 55 135-189 5-89 (327)
321 PRK07856 short chain dehydroge 95.3 0.033 7.1E-07 48.9 5.3 37 133-169 3-39 (252)
322 PLN02514 cinnamyl-alcohol dehy 95.3 0.053 1.1E-06 50.6 7.0 87 123-210 168-277 (357)
323 PRK05872 short chain dehydroge 95.3 0.019 4.1E-07 52.1 3.8 38 132-169 5-42 (296)
324 PRK09242 tropinone reductase; 95.3 0.017 3.7E-07 50.8 3.4 38 132-169 5-42 (257)
325 PLN02350 phosphogluconate dehy 95.2 0.035 7.7E-07 54.6 5.9 72 138-210 8-109 (493)
326 PF01113 DapB_N: Dihydrodipico 95.2 0.047 1E-06 43.5 5.6 50 138-187 2-75 (124)
327 PRK07035 short chain dehydroge 95.2 0.019 4.2E-07 50.2 3.7 37 133-169 5-41 (252)
328 PRK08416 7-alpha-hydroxysteroi 95.2 0.029 6.4E-07 49.5 4.9 37 132-168 4-40 (260)
329 PRK07680 late competence prote 95.2 0.028 6.2E-07 50.6 4.8 71 138-209 2-97 (273)
330 TIGR01214 rmlD dTDP-4-dehydror 95.2 0.029 6.2E-07 50.1 4.8 52 138-189 1-60 (287)
331 PRK06196 oxidoreductase; Provi 95.2 0.022 4.7E-07 52.1 4.1 39 131-169 21-59 (315)
332 PRK13394 3-hydroxybutyrate deh 95.2 0.023 5E-07 49.8 4.1 37 133-169 4-40 (262)
333 PRK08264 short chain dehydroge 95.2 0.03 6.5E-07 48.5 4.8 38 133-170 3-41 (238)
334 PRK04690 murD UDP-N-acetylmura 95.2 0.049 1.1E-06 53.1 6.7 122 134-262 6-140 (468)
335 PRK12481 2-deoxy-D-gluconate 3 95.2 0.031 6.8E-07 49.2 4.9 37 133-169 5-41 (251)
336 PRK06125 short chain dehydroge 95.2 0.028 6.1E-07 49.5 4.5 37 133-169 4-40 (259)
337 cd08293 PTGR2 Prostaglandin re 95.1 0.055 1.2E-06 49.6 6.6 74 136-209 155-255 (345)
338 PRK07411 hypothetical protein; 95.1 0.032 7E-07 53.2 5.2 34 133-167 35-69 (390)
339 PRK09291 short chain dehydroge 95.1 0.035 7.5E-07 48.6 5.0 34 136-169 2-35 (257)
340 PRK07878 molybdopterin biosynt 95.1 0.032 7E-07 53.3 5.1 33 134-167 40-73 (392)
341 PLN02695 GDP-D-mannose-3',5'-e 95.1 0.039 8.6E-07 51.9 5.6 54 135-188 20-94 (370)
342 PRK08936 glucose-1-dehydrogena 95.1 0.036 7.7E-07 48.9 5.1 37 133-169 4-40 (261)
343 PRK08229 2-dehydropantoate 2-r 95.1 0.043 9.3E-07 50.8 5.8 71 137-208 3-107 (341)
344 PRK05876 short chain dehydroge 95.1 0.022 4.7E-07 51.2 3.7 37 133-169 3-39 (275)
345 PRK07774 short chain dehydroge 95.1 0.037 8E-07 48.2 5.1 37 133-169 3-39 (250)
346 PRK07814 short chain dehydroge 95.1 0.03 6.5E-07 49.6 4.6 37 133-169 7-43 (263)
347 cd08294 leukotriene_B4_DH_like 95.1 0.067 1.5E-06 48.5 7.0 93 117-209 125-242 (329)
348 PRK05786 fabG 3-ketoacyl-(acyl 95.1 0.03 6.5E-07 48.4 4.5 37 134-170 3-39 (238)
349 PRK12826 3-ketoacyl-(acyl-carr 95.1 0.036 7.8E-07 48.0 5.0 36 134-169 4-39 (251)
350 PRK07531 bifunctional 3-hydrox 95.1 0.051 1.1E-06 53.4 6.5 52 137-189 5-90 (495)
351 PRK06114 short chain dehydroge 95.1 0.039 8.4E-07 48.5 5.2 38 132-169 4-41 (254)
352 PRK06194 hypothetical protein; 95.1 0.034 7.4E-07 49.7 4.9 37 133-169 3-39 (287)
353 PRK08589 short chain dehydroge 95.1 0.026 5.6E-07 50.4 4.1 37 133-169 3-39 (272)
354 PRK06200 2,3-dihydroxy-2,3-dih 95.1 0.024 5.1E-07 50.1 3.8 36 134-169 4-39 (263)
355 PRK08277 D-mannonate oxidoredu 95.1 0.023 5E-07 50.6 3.8 38 132-169 6-43 (278)
356 PRK06500 short chain dehydroge 95.1 0.024 5.2E-07 49.2 3.8 36 134-169 4-39 (249)
357 cd08230 glucose_DH Glucose deh 95.1 0.046 1E-06 50.7 5.9 76 134-210 171-271 (355)
358 PRK04308 murD UDP-N-acetylmura 95.1 0.061 1.3E-06 51.9 6.9 35 134-169 3-37 (445)
359 COG0604 Qor NADPH:quinone redu 95.1 0.059 1.3E-06 50.2 6.6 94 117-210 124-243 (326)
360 PLN02178 cinnamyl-alcohol dehy 95.1 0.083 1.8E-06 49.8 7.7 93 117-210 159-275 (375)
361 PRK07825 short chain dehydroge 95.1 0.03 6.5E-07 49.7 4.5 37 133-169 2-38 (273)
362 PF04127 DFP: DNA / pantothena 95.1 0.042 9.1E-07 47.2 5.2 78 134-211 1-121 (185)
363 PRK15057 UDP-glucose 6-dehydro 95.0 0.06 1.3E-06 51.4 6.7 71 138-211 2-120 (388)
364 PRK12743 oxidoreductase; Provi 95.0 0.058 1.2E-06 47.5 6.2 33 136-168 2-34 (256)
365 PRK12429 3-hydroxybutyrate deh 95.0 0.035 7.5E-07 48.4 4.7 36 134-169 2-37 (258)
366 PRK15181 Vi polysaccharide bio 95.0 0.057 1.2E-06 50.2 6.4 37 132-168 11-47 (348)
367 PLN02778 3,5-epimerase/4-reduc 95.0 0.061 1.3E-06 49.1 6.5 55 135-189 8-67 (298)
368 PLN02858 fructose-bisphosphate 95.0 0.037 7.9E-07 60.8 5.8 74 136-210 324-420 (1378)
369 PRK07067 sorbitol dehydrogenas 95.0 0.033 7.1E-07 49.0 4.5 36 134-169 4-39 (257)
370 PLN02214 cinnamoyl-CoA reducta 95.0 0.053 1.1E-06 50.4 6.1 35 134-168 8-42 (342)
371 PRK02006 murD UDP-N-acetylmura 95.0 0.064 1.4E-06 52.6 6.9 35 134-169 5-39 (498)
372 PRK05225 ketol-acid reductoiso 95.0 0.025 5.3E-07 55.0 3.8 55 134-189 34-107 (487)
373 PLN03209 translocon at the inn 94.9 0.042 9.2E-07 54.9 5.5 36 134-169 78-113 (576)
374 PF13738 Pyr_redox_3: Pyridine 94.9 0.038 8.2E-07 46.7 4.6 37 133-170 164-200 (203)
375 TIGR02279 PaaC-3OHAcCoADH 3-hy 94.9 0.037 8.1E-07 54.6 5.1 32 137-169 6-37 (503)
376 COG0540 PyrB Aspartate carbamo 94.9 0.91 2E-05 42.0 13.6 140 28-185 63-230 (316)
377 TIGR01763 MalateDH_bact malate 94.9 0.08 1.7E-06 48.8 6.9 53 137-191 2-81 (305)
378 cd05188 MDR Medium chain reduc 94.9 0.15 3.2E-06 44.3 8.3 93 118-211 117-235 (271)
379 PRK06079 enoyl-(acyl carrier p 94.9 0.042 9.1E-07 48.5 4.9 36 134-169 5-42 (252)
380 PLN02383 aspartate semialdehyd 94.9 0.043 9.4E-07 51.6 5.2 78 135-212 6-104 (344)
381 PRK01390 murD UDP-N-acetylmura 94.9 0.058 1.2E-06 52.2 6.2 35 134-169 7-41 (460)
382 PRK12823 benD 1,6-dihydroxycyc 94.9 0.046 9.9E-07 48.0 5.1 37 133-169 5-41 (260)
383 PRK07576 short chain dehydroge 94.9 0.046 9.9E-07 48.5 5.1 37 133-169 6-42 (264)
384 PRK12742 oxidoreductase; Provi 94.8 0.048 1E-06 47.1 5.1 36 133-168 3-38 (237)
385 TIGR00873 gnd 6-phosphoglucona 94.8 0.032 7E-07 54.6 4.4 71 138-209 1-99 (467)
386 cd00704 MDH Malate dehydrogena 94.8 0.075 1.6E-06 49.5 6.6 54 138-191 2-88 (323)
387 PTZ00079 NADP-specific glutama 94.8 0.074 1.6E-06 51.7 6.7 53 116-169 213-270 (454)
388 PRK06505 enoyl-(acyl carrier p 94.8 0.043 9.3E-07 49.2 4.8 35 134-169 5-42 (271)
389 PRK05808 3-hydroxybutyryl-CoA 94.8 0.037 8E-07 50.1 4.4 32 137-169 4-35 (282)
390 PRK07533 enoyl-(acyl carrier p 94.8 0.049 1.1E-06 48.2 5.2 37 132-169 6-45 (258)
391 PRK14806 bifunctional cyclohex 94.8 0.045 9.8E-07 56.2 5.6 73 137-210 4-99 (735)
392 cd05292 LDH_2 A subgroup of L- 94.8 0.074 1.6E-06 49.1 6.5 52 138-190 2-78 (308)
393 PLN02657 3,8-divinyl protochlo 94.8 0.058 1.3E-06 51.3 5.9 39 131-169 55-93 (390)
394 PRK07666 fabG 3-ketoacyl-(acyl 94.8 0.041 8.9E-07 47.7 4.5 36 134-169 5-40 (239)
395 PRK08268 3-hydroxy-acyl-CoA de 94.8 0.044 9.5E-07 54.1 5.2 32 137-169 8-39 (507)
396 PRK06139 short chain dehydroge 94.8 0.025 5.5E-07 52.5 3.3 37 133-169 4-40 (330)
397 PRK06223 malate dehydrogenase; 94.8 0.091 2E-06 48.1 6.9 53 137-191 3-82 (307)
398 PRK12939 short chain dehydroge 94.8 0.044 9.6E-07 47.5 4.6 37 133-169 4-40 (250)
399 TIGR01850 argC N-acetyl-gamma- 94.8 0.055 1.2E-06 50.8 5.5 76 137-212 1-103 (346)
400 KOG1201 Hydroxysteroid 17-beta 94.7 0.072 1.6E-06 48.9 6.0 58 131-188 33-123 (300)
401 PRK05557 fabG 3-ketoacyl-(acyl 94.7 0.056 1.2E-06 46.6 5.2 37 133-169 2-38 (248)
402 TIGR03466 HpnA hopanoid-associ 94.7 0.059 1.3E-06 48.7 5.5 52 137-188 1-73 (328)
403 TIGR03206 benzo_BadH 2-hydroxy 94.7 0.05 1.1E-06 47.2 4.9 36 134-169 1-36 (250)
404 PRK05653 fabG 3-ketoacyl-(acyl 94.7 0.054 1.2E-06 46.6 5.0 37 133-169 2-38 (246)
405 COG1064 AdhP Zn-dependent alco 94.7 0.047 1E-06 51.2 4.8 84 125-211 157-262 (339)
406 TIGR03376 glycerol3P_DH glycer 94.7 0.065 1.4E-06 50.3 5.8 69 138-208 1-116 (342)
407 PRK06153 hypothetical protein; 94.7 0.042 9.1E-07 52.4 4.5 34 133-167 173-207 (393)
408 PRK07326 short chain dehydroge 94.7 0.057 1.2E-06 46.6 5.1 36 134-169 4-39 (237)
409 PRK08226 short chain dehydroge 94.7 0.054 1.2E-06 47.7 5.0 36 134-169 4-39 (263)
410 PRK07806 short chain dehydroge 94.6 0.059 1.3E-06 46.9 5.2 36 134-169 4-39 (248)
411 PRK08278 short chain dehydroge 94.6 0.055 1.2E-06 48.4 5.0 37 133-169 3-39 (273)
412 PRK05875 short chain dehydroge 94.6 0.056 1.2E-06 48.0 5.0 37 133-169 4-40 (276)
413 PRK08217 fabG 3-ketoacyl-(acyl 94.6 0.036 7.7E-07 48.1 3.7 36 134-169 3-38 (253)
414 PLN00106 malate dehydrogenase 94.6 0.13 2.8E-06 48.0 7.5 57 135-191 17-98 (323)
415 PRK13376 pyrB bifunctional asp 94.6 0.52 1.1E-05 46.8 12.1 146 28-182 67-244 (525)
416 PRK05565 fabG 3-ketoacyl-(acyl 94.6 0.05 1.1E-06 47.0 4.5 37 133-169 2-39 (247)
417 PRK07792 fabG 3-ketoacyl-(acyl 94.6 0.058 1.3E-06 49.2 5.1 39 131-169 7-45 (306)
418 PRK09414 glutamate dehydrogena 94.5 0.085 1.8E-06 51.3 6.4 51 115-166 207-261 (445)
419 TIGR01851 argC_other N-acetyl- 94.5 0.057 1.2E-06 50.0 4.9 76 137-212 2-84 (310)
420 PRK06197 short chain dehydroge 94.5 0.055 1.2E-06 49.1 4.9 37 133-169 13-49 (306)
421 smart00859 Semialdhyde_dh Semi 94.5 0.055 1.2E-06 42.6 4.3 75 138-212 1-103 (122)
422 TIGR01777 yfcH conserved hypot 94.5 0.088 1.9E-06 46.7 6.1 51 139-189 1-67 (292)
423 KOG1494 NAD-dependent malate d 94.5 0.048 1E-06 49.8 4.2 57 134-191 26-108 (345)
424 PRK06914 short chain dehydroge 94.5 0.059 1.3E-06 48.0 4.8 35 135-169 2-36 (280)
425 PRK06701 short chain dehydroge 94.5 0.061 1.3E-06 48.7 5.0 38 132-169 42-79 (290)
426 KOG0725 Reductases with broad 94.4 0.052 1.1E-06 49.2 4.4 39 132-170 4-42 (270)
427 PLN02253 xanthoxin dehydrogena 94.4 0.067 1.4E-06 47.7 5.1 37 133-169 15-51 (280)
428 PRK05693 short chain dehydroge 94.4 0.082 1.8E-06 47.0 5.7 33 137-169 2-34 (274)
429 PLN02653 GDP-mannose 4,6-dehyd 94.4 0.07 1.5E-06 49.1 5.3 36 133-168 3-38 (340)
430 cd08239 THR_DH_like L-threonin 94.4 0.097 2.1E-06 48.0 6.3 92 117-210 146-264 (339)
431 PRK12827 short chain dehydroge 94.4 0.066 1.4E-06 46.3 4.9 36 133-168 3-38 (249)
432 PRK08643 acetoin reductase; Va 94.4 0.062 1.3E-06 47.1 4.8 34 136-169 2-35 (256)
433 COG0059 IlvC Ketol-acid reduct 94.4 0.086 1.9E-06 48.6 5.7 54 134-188 16-83 (338)
434 PRK12937 short chain dehydroge 94.4 0.069 1.5E-06 46.2 5.0 36 133-168 2-37 (245)
435 PRK08594 enoyl-(acyl carrier p 94.4 0.069 1.5E-06 47.4 5.0 36 132-168 3-41 (257)
436 PRK05086 malate dehydrogenase; 94.4 0.12 2.6E-06 47.8 6.8 55 137-191 1-81 (312)
437 PRK12936 3-ketoacyl-(acyl-carr 94.4 0.063 1.4E-06 46.4 4.7 37 133-169 3-39 (245)
438 cd05293 LDH_1 A subgroup of L- 94.3 0.13 2.9E-06 47.6 7.0 52 137-190 4-82 (312)
439 PRK06113 7-alpha-hydroxysteroi 94.3 0.067 1.4E-06 47.0 4.8 37 133-169 8-44 (255)
440 PF00070 Pyr_redox: Pyridine n 94.3 0.083 1.8E-06 38.4 4.6 32 138-170 1-32 (80)
441 COG1090 Predicted nucleoside-d 94.3 0.095 2.1E-06 47.8 5.8 52 139-190 1-67 (297)
442 PRK12769 putative oxidoreducta 94.3 0.11 2.3E-06 52.9 6.8 34 135-169 326-359 (654)
443 COG2072 TrkA Predicted flavopr 94.3 0.061 1.3E-06 52.2 4.9 37 132-169 171-207 (443)
444 PRK11863 N-acetyl-gamma-glutam 94.3 0.057 1.2E-06 50.1 4.4 78 137-214 3-87 (313)
445 PRK07985 oxidoreductase; Provi 94.3 0.072 1.6E-06 48.3 5.0 36 133-168 46-81 (294)
446 PRK07677 short chain dehydroge 94.3 0.065 1.4E-06 47.0 4.6 34 136-169 1-34 (252)
447 PRK15182 Vi polysaccharide bio 94.3 0.11 2.5E-06 50.1 6.6 76 135-212 5-124 (425)
448 PRK07109 short chain dehydroge 94.2 0.044 9.4E-07 50.9 3.6 37 133-169 5-41 (334)
449 TIGR01963 PHB_DH 3-hydroxybuty 94.2 0.054 1.2E-06 47.1 4.0 34 136-169 1-34 (255)
450 PRK05993 short chain dehydroge 94.2 0.063 1.4E-06 48.0 4.5 35 135-169 3-37 (277)
451 PLN02206 UDP-glucuronate decar 94.2 0.11 2.3E-06 50.5 6.3 36 133-168 116-151 (442)
452 PRK08642 fabG 3-ketoacyl-(acyl 94.2 0.081 1.8E-06 46.0 5.0 35 134-168 3-37 (253)
453 PRK12779 putative bifunctional 94.2 0.084 1.8E-06 56.0 6.0 35 134-169 304-338 (944)
454 PRK09135 pteridine reductase; 94.2 0.079 1.7E-06 45.8 4.9 36 134-169 4-39 (249)
455 PRK14030 glutamate dehydrogena 94.2 0.14 3E-06 49.8 6.9 51 115-166 203-257 (445)
456 PRK08303 short chain dehydroge 94.2 0.081 1.7E-06 48.5 5.2 38 132-169 4-41 (305)
457 PRK06198 short chain dehydroge 94.2 0.069 1.5E-06 46.8 4.6 37 133-169 3-40 (260)
458 PLN02730 enoyl-[acyl-carrier-p 94.2 0.088 1.9E-06 48.5 5.4 35 131-166 4-41 (303)
459 PRK01368 murD UDP-N-acetylmura 94.2 0.12 2.6E-06 50.3 6.5 120 135-262 5-129 (454)
460 TIGR02622 CDP_4_6_dhtase CDP-g 94.1 0.077 1.7E-06 49.2 5.0 36 134-169 2-37 (349)
461 cd08281 liver_ADH_like1 Zinc-d 94.1 0.17 3.7E-06 47.3 7.4 76 134-210 190-292 (371)
462 PRK07577 short chain dehydroge 94.1 0.09 1.9E-06 45.2 5.1 35 135-169 2-36 (234)
463 PRK08267 short chain dehydroge 94.1 0.064 1.4E-06 47.2 4.2 33 137-169 2-34 (260)
464 cd08292 ETR_like_2 2-enoyl thi 94.1 0.22 4.7E-06 44.9 7.8 91 118-209 123-239 (324)
465 PRK08040 putative semialdehyde 94.1 0.056 1.2E-06 50.7 4.0 78 135-212 3-101 (336)
466 PRK08328 hypothetical protein; 94.1 0.081 1.8E-06 46.8 4.8 36 133-169 24-60 (231)
467 PLN03154 putative allyl alcoho 94.0 0.17 3.7E-06 47.0 7.1 52 117-168 140-191 (348)
468 PRK12809 putative oxidoreducta 94.0 0.13 2.9E-06 52.1 6.8 34 135-169 309-342 (639)
469 cd00300 LDH_like L-lactate deh 94.0 0.12 2.7E-06 47.4 6.1 51 139-191 1-78 (300)
470 cd01338 MDH_choloroplast_like 94.0 0.16 3.4E-06 47.4 6.7 56 136-191 2-90 (322)
471 PRK08993 2-deoxy-D-gluconate 3 94.0 0.091 2E-06 46.2 4.9 36 133-168 7-42 (253)
472 PRK06483 dihydromonapterin red 94.0 0.08 1.7E-06 45.8 4.5 35 136-170 2-36 (236)
473 TIGR01724 hmd_rel H2-forming N 94.0 0.11 2.4E-06 48.4 5.6 63 149-211 32-119 (341)
474 cd08253 zeta_crystallin Zeta-c 93.9 0.33 7.2E-06 43.1 8.6 89 122-210 131-245 (325)
475 PRK08945 putative oxoacyl-(acy 93.9 0.089 1.9E-06 45.9 4.8 36 134-169 10-45 (247)
476 PRK06128 oxidoreductase; Provi 93.9 0.093 2E-06 47.6 5.0 36 133-168 52-87 (300)
477 PRK07984 enoyl-(acyl carrier p 93.9 0.09 2E-06 47.0 4.9 36 134-169 4-41 (262)
478 PRK06444 prephenate dehydrogen 93.9 0.12 2.6E-06 44.9 5.4 56 138-209 2-60 (197)
479 TIGR03026 NDP-sugDHase nucleot 93.9 0.23 5E-06 47.5 7.9 75 133-207 310-409 (411)
480 PRK06180 short chain dehydroge 93.9 0.078 1.7E-06 47.4 4.4 35 135-169 3-37 (277)
481 PRK07370 enoyl-(acyl carrier p 93.9 0.1 2.2E-06 46.2 5.1 34 133-167 3-39 (258)
482 PRK06603 enoyl-(acyl carrier p 93.9 0.1 2.2E-06 46.3 5.0 36 134-169 6-43 (260)
483 TIGR03451 mycoS_dep_FDH mycoth 93.8 0.17 3.7E-06 47.0 6.8 76 134-210 175-278 (358)
484 cd05282 ETR_like 2-enoyl thioe 93.8 0.24 5.2E-06 44.6 7.6 91 120-210 123-239 (323)
485 PRK12384 sorbitol-6-phosphate 93.8 0.089 1.9E-06 46.1 4.6 34 136-169 2-35 (259)
486 PRK11880 pyrroline-5-carboxyla 93.8 0.14 3E-06 45.7 5.9 52 137-189 3-72 (267)
487 COG0039 Mdh Malate/lactate deh 93.8 0.18 3.9E-06 46.8 6.7 53 137-191 1-81 (313)
488 PRK07831 short chain dehydroge 93.8 0.099 2.2E-06 46.1 4.9 36 134-169 15-51 (262)
489 PLN02583 cinnamoyl-CoA reducta 93.8 0.1 2.2E-06 47.4 5.1 36 133-168 3-38 (297)
490 PRK08415 enoyl-(acyl carrier p 93.8 0.1 2.2E-06 47.0 5.0 35 134-169 3-40 (274)
491 PF00185 OTCace: Aspartate/orn 93.7 0.17 3.6E-06 42.2 5.8 74 135-208 1-120 (158)
492 COG1250 FadB 3-hydroxyacyl-CoA 93.7 0.15 3.2E-06 47.3 5.9 33 136-169 3-35 (307)
493 cd05294 LDH-like_MDH_nadp A la 93.7 0.21 4.4E-06 46.2 6.9 54 137-191 1-84 (309)
494 PTZ00345 glycerol-3-phosphate 93.7 0.15 3.3E-06 48.3 6.1 72 136-208 11-129 (365)
495 PRK00683 murD UDP-N-acetylmura 93.7 0.18 3.9E-06 48.3 6.7 108 135-262 2-127 (418)
496 PRK00436 argC N-acetyl-gamma-g 93.7 0.092 2E-06 49.2 4.6 75 137-211 3-102 (343)
497 cd01339 LDH-like_MDH L-lactate 93.7 0.16 3.5E-06 46.5 6.1 51 139-191 1-78 (300)
498 cd05290 LDH_3 A subgroup of L- 93.6 0.15 3.2E-06 47.2 5.8 53 138-191 1-80 (307)
499 PRK11730 fadB multifunctional 93.6 0.14 3.1E-06 52.7 6.2 32 137-169 314-345 (715)
500 cd08295 double_bond_reductase_ 93.6 0.22 4.8E-06 45.7 7.1 89 121-209 137-252 (338)
No 1
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=100.00 E-value=3.2e-80 Score=551.81 Aligned_cols=259 Identities=54% Similarity=0.854 Sum_probs=250.3
Q ss_pred CCCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCC
Q 024306 2 KKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLD 81 (269)
Q Consensus 2 ~~~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~ 81 (269)
+++.+.+|+|++|++|+||+|+.|+++|.++|+++|+.++.+.||++++++||++.|++||+|++||||+||+|||+|+|
T Consensus 24 ~~~~~~~P~LavilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I~~lN~D~~v~GIlVQlPLp~hld 103 (283)
T COG0190 24 KAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALIDELNADPEVDGILVQLPLPKHLD 103 (283)
T ss_pred HhccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCC
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC
Q 024306 82 EGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA 161 (269)
Q Consensus 82 ~~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga 161 (269)
+.+++++|+|+|||||||++|.|+|..+ ++.|+||||.|++++|++|+++++||+++|||||..||||++++|...+|
T Consensus 104 ~~~il~~I~p~KDVDG~hp~N~g~L~~~--~~~~~PCTp~gi~~ll~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~na 181 (283)
T COG0190 104 EQKLLQAIDPEKDVDGFHPYNLGKLAQG--EPGFLPCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANA 181 (283)
T ss_pred HHHHHhhcCcCCCccccChhHhcchhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCC
Confidence 9999999999999999999999999865 77899999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecc
Q 024306 162 TVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITP 241 (269)
Q Consensus 162 ~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tp 241 (269)
+||+||++|+++.+++++|||||+|+|+|++++.+|+++|++|||+|+|+.++ ++++|||||+++.++++++||
T Consensus 182 TVtvcHs~T~~l~~~~k~ADIvv~AvG~p~~i~~d~vk~gavVIDVGinrv~~------~kl~GDVdf~~v~~~a~~iTP 255 (283)
T COG0190 182 TVTVCHSRTKDLASITKNADIVVVAVGKPHFIKADMVKPGAVVIDVGINRVND------GKLVGDVDFDSVKEKASAITP 255 (283)
T ss_pred EEEEEcCCCCCHHHHhhhCCEEEEecCCccccccccccCCCEEEecCCccccC------CceEeeccHHHHHHhhcccCC
Confidence 99999999999999999999999999999999999999999999999999864 289999999999999999999
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 242 VPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 242 vpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
|||||||||++|||+|+++++++..+.
T Consensus 256 VPGGVGPmTvamLl~Nt~~a~~~~~~~ 282 (283)
T COG0190 256 VPGGVGPMTVAMLLENTLKAAERQRGE 282 (283)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999987664
No 2
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=5.1e-80 Score=565.84 Aligned_cols=265 Identities=78% Similarity=1.269 Sum_probs=251.5
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCH
Q 024306 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (269)
Q Consensus 3 ~~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~ 82 (269)
++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.+.||++++|+||++.|++||+|++||||+||+|||+|+++
T Consensus 81 ~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D~~V~GIlVQlPLP~hid~ 160 (345)
T PLN02897 81 KAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLPLPQHLDE 160 (345)
T ss_pred hccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE
Q 024306 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT 162 (269)
Q Consensus 83 ~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~ 162 (269)
.+++++|+|+|||||+|+.|.|+|+.++..++|+||||.|++++|++|+++++||+|+|||||..||+|++++|.++||+
T Consensus 161 ~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~AT 240 (345)
T PLN02897 161 SKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDAT 240 (345)
T ss_pred HHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCE
Confidence 99999999999999999999999987544478999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceeccc
Q 024306 163 VSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPV 242 (269)
Q Consensus 163 Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpv 242 (269)
||+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+|+.+++.++.|++++|||||+++.++++++|||
T Consensus 241 VTicHs~T~nl~~~~~~ADIvIsAvGkp~~v~~d~vk~GavVIDVGin~~~~~~~~~g~klvGDVdfe~v~~~as~iTPV 320 (345)
T PLN02897 241 VSTVHAFTKDPEQITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVEDSSCEFGYRLVGDVCYEEALGVASAITPV 320 (345)
T ss_pred EEEEcCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccccccccccCCCeeEecccHHHHHhhccccCCC
Confidence 99999999999999999999999999999999999999999999999996443333345899999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHhC
Q 024306 243 PGGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 243 pgGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
||||||||++|||+|+++++++|+.
T Consensus 321 PGGVGpmTvamLm~N~~~a~~~~~~ 345 (345)
T PLN02897 321 PGGVGPMTITMLLCNTLDAAKRIFL 345 (345)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999863
No 3
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=8.7e-80 Score=566.33 Aligned_cols=266 Identities=71% Similarity=1.145 Sum_probs=252.4
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCH
Q 024306 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (269)
Q Consensus 3 ~~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~ 82 (269)
++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.+.||++++|+|+++.|++||+|++||||+||+|||+|+++
T Consensus 98 ~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~ 177 (364)
T PLN02616 98 ESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDE 177 (364)
T ss_pred HcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCH
Confidence 44588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE
Q 024306 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT 162 (269)
Q Consensus 83 ~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~ 162 (269)
.+++++|+|+|||||+|+.|.|+|+.++..++|+||||.|++++|++|+++++||+|+|||+|..||+|++++|.++||+
T Consensus 178 ~~i~~aI~P~KDVDGl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~AT 257 (364)
T PLN02616 178 QNILNAVSIEKDVDGFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDAT 257 (364)
T ss_pred HHHHhccCcccCcccCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCe
Confidence 99999999999999999999999997644578999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceeccc
Q 024306 163 VSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPV 242 (269)
Q Consensus 163 Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpv 242 (269)
||+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+|+.+++.++.|++++|||||+++.++++++|||
T Consensus 258 VTicHs~T~nl~~~~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVGIn~~~~~~~~~g~klvGDVdfe~v~~~as~ITPV 337 (364)
T PLN02616 258 VSIVHSRTKNPEEITREADIIISAVGQPNMVRGSWIKPGAVVIDVGINPVEDASSPRGYRLVGDVCYEEACKVASAVTPV 337 (364)
T ss_pred EEEeCCCCCCHHHHHhhCCEEEEcCCCcCcCCHHHcCCCCEEEeccccccccccccCCCeEEecCcHHHHHhhccccCCC
Confidence 99999999999999999999999999999999999999999999999996443222344899999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 243 PGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 243 pgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
||||||||++|||+|++++++++.++
T Consensus 338 PGGVGpmTva~Ll~N~~~aa~~~~~~ 363 (364)
T PLN02616 338 PGGVGPMTIAMLLSNTLTSAKRIHNF 363 (364)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999998765
No 4
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.1e-79 Score=550.77 Aligned_cols=256 Identities=42% Similarity=0.738 Sum_probs=245.9
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.|++|+||+|++|+||+|..|+++|.|+|+++||+++.+.||+++++++|++.|++||+|++||||+||+|||+|+++.
T Consensus 28 ~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D~~V~GIlvqlPLP~~id~~ 107 (288)
T PRK14171 28 QTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLDNEISGIIVQLPLPSSIDKN 107 (288)
T ss_pred ccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHH
Confidence 34889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+|||||+|+.|.|+++.|. ..+|+||||.|++++|++|+++++||+|+|||||..||+|++++|.++||+|
T Consensus 108 ~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATV 186 (288)
T PRK14171 108 KILSAVSPSKDIDGFHPLNVGYLHSGI-SQGFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSV 186 (288)
T ss_pred HHHhccCcccccccCCccchhhhhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEE
Confidence 999999999999999999999999763 4689999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+|+..+ ++++|||||+++.++++++||||
T Consensus 187 tichs~T~~L~~~~~~ADIvV~AvGkp~~i~~~~vk~GavVIDvGin~~~~------gkl~GDVd~~~v~~~a~~iTPVP 260 (288)
T PRK14171 187 TICHSKTHNLSSITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINRISG------NKIIGDVDFENVKSKVKYITPVP 260 (288)
T ss_pred EEeCCCCCCHHHHHhhCCEEEEccCCCCccCHHHcCCCCEEEEeeccccCC------CCeECCccHHHHHhhceEeCCCC
Confidence 999999999999999999999999999999999999999999999998632 28999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHh
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
|||||||++|||+|+++++++.+
T Consensus 261 GGVGp~T~a~L~~N~v~a~~~~~ 283 (288)
T PRK14171 261 GGIGPMTIAFLLKNTVKAFKDSL 283 (288)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998543
No 5
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8.1e-79 Score=551.46 Aligned_cols=266 Identities=50% Similarity=0.816 Sum_probs=250.3
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCH
Q 024306 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (269)
Q Consensus 3 ~~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~ 82 (269)
++.|++|+|++|++|+||+|.+|++.|.++|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++
T Consensus 28 ~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~ 107 (297)
T PRK14168 28 EKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNNDDSIHGILVQLPLPKHINE 107 (297)
T ss_pred HcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCH
Confidence 34488999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC---
Q 024306 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH--- 159 (269)
Q Consensus 83 ~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~--- 159 (269)
.+++++|+|+|||||+|+.|.|+++.|.....|+||||.|++++|++|+++++||+|+|||||..||+|++++|.++
T Consensus 108 ~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~ 187 (297)
T PRK14168 108 KKVLNAIDPDKDVDGFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPG 187 (297)
T ss_pred HHHHhccCccccccccChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccC
Confidence 99999999999999999999999998754468999999999999999999999999999999999999999999998
Q ss_pred -CCEEEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcce
Q 024306 160 -HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASV 238 (269)
Q Consensus 160 -ga~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~ 238 (269)
+|+||+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+|+..+..+.++++++|||||+++.+++++
T Consensus 188 ~~atVtv~hs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gavVIDvGin~~~~~~~~g~~~~~GDVdfe~v~~~a~~ 267 (297)
T PRK14168 188 ANATVTIVHTRSKNLARHCQRADILIVAAGVPNLVKPEWIKPGATVIDVGVNRVGTNESTGKAILSGDVDFDAVKEIAGK 267 (297)
T ss_pred CCCEEEEecCCCcCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEecCCCccCccccCCCcceeccccHHHHHhhccE
Confidence 7999999999999999999999999999999999999999999999999998532111011249999999999999999
Q ss_pred ecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 239 ITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 239 ~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
+|||||||||+|++|||+|+++++++|+++
T Consensus 268 iTPVPGGVGp~T~a~L~~N~~~a~~~~~~~ 297 (297)
T PRK14168 268 ITPVPGGVGPMTIAMLMRNTLKSAKFHLSL 297 (297)
T ss_pred ecCCCCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999985
No 6
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=100.00 E-value=1e-78 Score=550.76 Aligned_cols=265 Identities=63% Similarity=1.052 Sum_probs=250.5
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCH
Q 024306 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (269)
Q Consensus 3 ~~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~ 82 (269)
++.|++|+|++|++|+||+|..|++.|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++
T Consensus 34 ~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvq~PlP~~id~ 113 (299)
T PLN02516 34 EKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISKVHELNANPDVHGILVQLPLPKHINE 113 (299)
T ss_pred HcCCCCCeEEEEEECCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCcCH
Confidence 34488999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE
Q 024306 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT 162 (269)
Q Consensus 83 ~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~ 162 (269)
.+++++|+|+|||||+|+.|.|+++.++...+|+||||.|++++|++|+++++||+|+|||||..||||++++|.++||+
T Consensus 114 ~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~AT 193 (299)
T PLN02516 114 EKILNEISLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADAT 193 (299)
T ss_pred HHHHhccCcccccCccCHhhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCE
Confidence 99999999999999999999999987643578999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceeccc
Q 024306 163 VSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPV 242 (269)
Q Consensus 163 Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpv 242 (269)
||+||++|+++++++++|||||+|+|+|++++++|+++|++|||+|+++..++....|.+++|||||+++.++++++|||
T Consensus 194 Vtvchs~T~nl~~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~~~~~~~~~g~kl~GDvd~e~v~~~a~~iTPV 273 (299)
T PLN02516 194 VTVVHSRTPDPESIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNAVSDPSKKSGYRLVGDVDFAEVSKVAGWITPV 273 (299)
T ss_pred EEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccccCcccccCCCceEcCcChHHhhhhceEecCC
Confidence 99999999999999999999999999999999999999999999999986442221233899999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHhC
Q 024306 243 PGGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 243 pgGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
||||||||++|||+|+++++++|+.
T Consensus 274 PGGVGp~T~a~L~~N~v~a~~~~~~ 298 (299)
T PLN02516 274 PGGVGPMTVAMLLKNTVDGAKRVFA 298 (299)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999974
No 7
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9.2e-79 Score=547.51 Aligned_cols=254 Identities=52% Similarity=0.902 Sum_probs=246.2
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i 85 (269)
|++|+|++|++|+||+|..|+++|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.++
T Consensus 29 g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i 108 (284)
T PRK14170 29 GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKV 108 (284)
T ss_pred CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEE
Q 024306 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSI 165 (269)
Q Consensus 86 ~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti 165 (269)
+++|+|+|||||+|+.|.|+++.| .++|+||||.|++++|++|+++++||+|+|||+|..||+|++++|.++||+||+
T Consensus 109 ~~~I~p~KDVDGl~p~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVti 186 (284)
T PRK14170 109 IDTISYDKDVDGFHPVNVGNLFIG--KDSFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTI 186 (284)
T ss_pred HhccCcccCcccCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEE
Confidence 999999999999999999999976 467999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCc
Q 024306 166 VHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGG 245 (269)
Q Consensus 166 ~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgG 245 (269)
||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++..+ ++++|||||+++.++++++||||||
T Consensus 187 chs~T~~l~~~~~~ADIvI~AvG~~~~i~~~~vk~GavVIDvGin~~~~------gkl~GDvdfe~~~~~a~~iTPVPGG 260 (284)
T PRK14170 187 AHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDEN------NKLCGDVDFDDVVEEAGFITPVPGG 260 (284)
T ss_pred eCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcccCC------CCeecccchHHHHhhccEecCCCCC
Confidence 9999999999999999999999999999999999999999999998533 2899999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHhC
Q 024306 246 VGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 246 vGp~T~~mLl~n~v~a~~~~~~ 267 (269)
|||+|++|||+|+++++++++-
T Consensus 261 VGpvT~a~L~~N~~~a~~~~~~ 282 (284)
T PRK14170 261 VGPMTITMLLANTLKAAKRIWK 282 (284)
T ss_pred hHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999998764
No 8
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.3e-78 Score=548.57 Aligned_cols=261 Identities=48% Similarity=0.794 Sum_probs=247.1
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCH
Q 024306 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (269)
Q Consensus 3 ~~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~ 82 (269)
++.|++|+|++|++|+||+|.+|+++|.++|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++
T Consensus 26 ~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~ 105 (293)
T PRK14185 26 AKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDVDGFIVQLPLPKHISE 105 (293)
T ss_pred hccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC---
Q 024306 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH--- 159 (269)
Q Consensus 83 ~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~--- 159 (269)
.+++++|+|+|||||+|+.|.|+|+.| .++|+||||.|++++|++|+++++||+|+|||||..||+|++.+|.++
T Consensus 106 ~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~ 183 (293)
T PRK14185 106 QKVIEAIDYRKDVDGFHPINVGRMSIG--LPCFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYP 183 (293)
T ss_pred HHHHhccCcccCcCCCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCC
Confidence 999999999999999999999999976 578999999999999999999999999999999999999999999998
Q ss_pred -CCEEEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcce
Q 024306 160 -HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASV 238 (269)
Q Consensus 160 -ga~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~ 238 (269)
+|+||+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+|+..++.+++|.+++|||||+++.+++++
T Consensus 184 ~~aTVtvchs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~~~~~~~g~klvGDVdf~~v~~~a~~ 263 (293)
T PRK14185 184 GDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVKADMVKEGAVVIDVGTTRVPDATRKSGFKLTGDVKFDEVAPKCSY 263 (293)
T ss_pred CCCEEEEecCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecCcccccccccCCCeeEcCCCHHHHHhhccE
Confidence 7999999999999999999999999999999999999999999999999998643222223489999999999999999
Q ss_pred ecccCCcccHHHHHHHHHHHHHHHHHH
Q 024306 239 ITPVPGGVGPMTVAMLLSNTLDSAKRA 265 (269)
Q Consensus 239 ~tpvpgGvGp~T~~mLl~n~v~a~~~~ 265 (269)
+|||||||||||++|||+|+++++++.
T Consensus 264 iTPVPGGVGp~T~a~L~~N~~~a~~~~ 290 (293)
T PRK14185 264 ITPVPGGVGPMTIVSLMKNTLLAGKKA 290 (293)
T ss_pred eCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998754
No 9
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2e-78 Score=547.75 Aligned_cols=261 Identities=44% Similarity=0.728 Sum_probs=247.8
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.|++|+|++|++|+||+|++|+++|.|+|+++||+++.+.||++++++++++.|++||+|++||||+||+|||+|+++.
T Consensus 28 ~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d~~V~GIlvqlPLP~~i~~~ 107 (294)
T PRK14187 28 QHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNNDDSVHGILVQLPVPNHIDKN 107 (294)
T ss_pred ccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHH
Confidence 34889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+|||||+|+.|.|+|+.|+..+.|+||||.|++++|++|+++++||+|+|||+|..||+|++++|.++||+|
T Consensus 108 ~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTV 187 (294)
T PRK14187 108 LIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTV 187 (294)
T ss_pred HHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEE
Confidence 99999999999999999999999987544689999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+|+..+. + .++++|||||+++.++++++||||
T Consensus 188 t~chs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVGin~~~~~-~--~~kl~GDvd~e~v~~~a~~iTPVP 264 (294)
T PRK14187 188 TTVHSATRDLADYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINSIEEG-G--VKKFVGDVDFAEVKKKASAITPVP 264 (294)
T ss_pred EEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccCCC-C--ccceeCCccHHHHhhhccEecCCC
Confidence 9999999999999999999999999999999999999999999999986331 0 127999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHhC
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
|||||||++|||+|+++++++..+
T Consensus 265 GGVGp~T~a~L~~N~~~a~~~~~~ 288 (294)
T PRK14187 265 GGVGPMTIAFLMVNTVIAACNQKG 288 (294)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999987643
No 10
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.5e-78 Score=544.72 Aligned_cols=254 Identities=49% Similarity=0.791 Sum_probs=245.0
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i 85 (269)
|++|+|++|++|+||+|.+|+++|.|+|+++||+++.+.||++++++||++.|++||+|++||||+||+|||+|+++.++
T Consensus 28 g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i 107 (282)
T PRK14166 28 GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLI 107 (282)
T ss_pred CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEE
Q 024306 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSI 165 (269)
Q Consensus 86 ~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti 165 (269)
+++|+|+|||||+|+.|.|+|+.|. .++|+||||.|++++|++|+++++||+|+|||||..||||++++|.++||+||+
T Consensus 108 ~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~ 186 (282)
T PRK14166 108 LESIISSKDVDGFHPINVGYLNLGL-ESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSV 186 (282)
T ss_pred HhccCcccCcccCChhhhHHHhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999763 468999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCc
Q 024306 166 VHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGG 245 (269)
Q Consensus 166 ~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgG 245 (269)
||++|+++++++++|||||+|+|+|++++++|+++|++|||+|+|+..+ ++++|||||+++.++++++||||||
T Consensus 187 chs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvGin~~~~------gkl~GDVd~~~v~~~a~~iTPVPGG 260 (282)
T PRK14166 187 CHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLES------GKIVGDVDFEEVSKKSSYITPVPGG 260 (282)
T ss_pred eCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEecccccCC------CCeeCCCCHHHHHhhccEecCCCCC
Confidence 9999999999999999999999999999999999999999999998532 1899999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHh
Q 024306 246 VGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 246 vGp~T~~mLl~n~v~a~~~~~ 266 (269)
|||+|++|||+|+++++++..
T Consensus 261 VGp~T~a~L~~N~v~a~~~~~ 281 (282)
T PRK14166 261 VGPMTIAMLLENTVKSAKNRL 281 (282)
T ss_pred chHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999998654
No 11
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.5e-78 Score=544.70 Aligned_cols=253 Identities=44% Similarity=0.737 Sum_probs=245.2
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i 85 (269)
|++|+|++|++|+||+|..|+++|.|+|+++||+++.+.||++++++||++.|++||+|++||||+||+|||+|+++.++
T Consensus 28 g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i 107 (282)
T PRK14169 28 DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAV 107 (282)
T ss_pred CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEE
Q 024306 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSI 165 (269)
Q Consensus 86 ~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti 165 (269)
+++|+|+|||||+|+.|.|+++.+ ..+|+||||.|++++|++|+++++||+|+|||||..||+|++++|.++||+||+
T Consensus 108 ~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVti 185 (282)
T PRK14169 108 IDAIDPDKDVDGFSPVSVGRLWAN--EPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTI 185 (282)
T ss_pred HhhcCcccCcccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEE
Confidence 999999999999999999999976 578999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCc
Q 024306 166 VHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGG 245 (269)
Q Consensus 166 ~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgG 245 (269)
||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+|+..+ ++++|||||+++.++++++||||||
T Consensus 186 chs~T~~l~~~~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvGin~~~~------gkl~GDVd~~~v~~~a~~iTPVPGG 259 (282)
T PRK14169 186 AHSKTRNLKQLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISRGAD------GKLLGDVDEAAVAPIASAITPVPGG 259 (282)
T ss_pred ECCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCcEEEEeeccccCC------CCeeecCcHHHHHhhccEecCCCCC
Confidence 9999999999999999999999999999999999999999999998533 1899999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHh
Q 024306 246 VGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 246 vGp~T~~mLl~n~v~a~~~~~ 266 (269)
|||||++|||+|+++++++..
T Consensus 260 VGp~T~a~L~~N~~~a~~~~~ 280 (282)
T PRK14169 260 VGPMTIASLMAQTVTLAKRRA 280 (282)
T ss_pred cHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998754
No 12
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3.1e-78 Score=543.65 Aligned_cols=254 Identities=49% Similarity=0.780 Sum_probs=245.4
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHH
Q 024306 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (269)
Q Consensus 5 ~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~ 84 (269)
.|++|+||+|++|+||+|..|+++|.++|+++||+++.+.||++++++++++.|++||+|++||||+||+|||+|+++.+
T Consensus 27 ~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~ 106 (282)
T PRK14182 27 RGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERA 106 (282)
T ss_pred CCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccccccccceecccccCCCCCc-cccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPL-FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 85 i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~-~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
++++|+|+|||||+|+.|.|+++.| ..+ |+||||.|++++|++|+++++||+|+|||+|..||+|++++|.++||+|
T Consensus 107 i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtV 184 (282)
T PRK14182 107 VLDAISPAKDADGFHPFNVGALSIG--IAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATV 184 (282)
T ss_pred HHhccCcccCcCCCCHhHHHHHhCC--CCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEE
Confidence 9999999999999999999999976 344 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++..+ ++++|||||+++.++++++||||
T Consensus 185 tichs~T~nl~~~~~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvGin~~~~------gkl~GDVd~~~v~~~a~~iTPVP 258 (282)
T PRK14182 185 TIAHSRTADLAGEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNRLAD------GKLVGDVEFAAAAARASAITPVP 258 (282)
T ss_pred EEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEeeceecCC------CCeeCCCCHHHHHhhccEecCCC
Confidence 999999999999999999999999999999999999999999999998633 18999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHh
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
|||||||++|||+|+++++++|.
T Consensus 259 GGVGp~T~a~L~~N~~~~~~~~~ 281 (282)
T PRK14182 259 GGVGPMTRAMLLVNTVELAKRTA 281 (282)
T ss_pred CCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999885
No 13
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.7e-78 Score=542.92 Aligned_cols=255 Identities=44% Similarity=0.714 Sum_probs=245.9
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.|++|+|++|++|+||+|..|+++|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.
T Consensus 27 ~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PlP~~i~~~ 106 (282)
T PRK14180 27 HTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKN 106 (282)
T ss_pred ccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHH
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+|||||+|+.|.|+++.|. ..+|+||||.|++++|++|+++++||+|+|||+|..||+|++++|.++||+|
T Consensus 107 ~i~~~I~p~KDVDGl~~~n~g~l~~g~-~~~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATV 185 (282)
T PRK14180 107 NVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATV 185 (282)
T ss_pred HHHhhcCccccccccChhhHHHHhcCC-CCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEE
Confidence 999999999999999999999999763 3679999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++|+++.+.+++|||||+|+|+|++++++|+++|++|||+|+|+.++ +++|||||+++.++++++||||
T Consensus 186 t~chs~T~dl~~~~k~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~g-------kl~GDvd~~~v~~~a~~iTPVP 258 (282)
T PRK14180 186 TTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDG-------KIVGDVDFAAVKDKVAAITPVP 258 (282)
T ss_pred EEEcCCCCCHHHHhhhcCEEEEccCCcCcCCHHHcCCCcEEEEecccccCC-------ceeCCcCHHHHHhhccEeccCC
Confidence 999999999999999999999999999999999999999999999998533 8999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHh
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
|||||+|++|||+|+++++++++
T Consensus 259 GGVGp~T~a~L~~Nl~~a~~~~~ 281 (282)
T PRK14180 259 GGVGPMTITELLYNTFQCAQELN 281 (282)
T ss_pred CChhHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998765
No 14
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5e-78 Score=543.45 Aligned_cols=259 Identities=44% Similarity=0.731 Sum_probs=246.0
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHH
Q 024306 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (269)
Q Consensus 5 ~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~ 84 (269)
.+++|+|++|++|+||+|+.|+++|.++|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.+
T Consensus 23 l~~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~d~~V~GIlvqlPlP~~i~~~~ 102 (287)
T PRK14181 23 SSTAPGLAVVLIGNDPASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIHRLNNDPNIHGILVQLPLPKHLDAQA 102 (287)
T ss_pred hCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCcCHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC----C
Q 024306 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----H 160 (269)
Q Consensus 85 i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~----g 160 (269)
++++|+|+|||||+|+.|.|+|+.|+ .+.|+||||.|++++|++|+++++||+|+|||||..||||++++|.++ +
T Consensus 103 i~~~I~p~KDVDGl~p~n~g~l~~g~-~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~ 181 (287)
T PRK14181 103 ILQAISPDKDVDGLHPVNMGKLLLGE-TDGFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTN 181 (287)
T ss_pred HHhccCcccCcccCChhhHHHHhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCC
Confidence 99999999999999999999999773 457999999999999999999999999999999999999999999999 8
Q ss_pred CEEEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceec
Q 024306 161 ATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVIT 240 (269)
Q Consensus 161 a~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~t 240 (269)
|+||+||++|+++++++++|||||+|+|+|++++++|+++|++|||+|+|+..++++ .|++++|||||+++.++++++|
T Consensus 182 AtVtvchs~T~~l~~~~~~ADIvV~AvG~p~~i~~~~ik~GavVIDvGin~~~~~~~-~g~kl~GDVd~e~~~~~a~~iT 260 (287)
T PRK14181 182 ATVTLLHSQSENLTEILKTADIIIAAIGVPLFIKEEMIAEKAVIVDVGTSRVPAANP-KGYILVGDVDFNNVVPKCRAIT 260 (287)
T ss_pred CEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccccccC-CCCeeEeccchHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999998533221 1237999999999999999999
Q ss_pred ccCCcccHHHHHHHHHHHHHHHHHH
Q 024306 241 PVPGGVGPMTVAMLLSNTLDSAKRA 265 (269)
Q Consensus 241 pvpgGvGp~T~~mLl~n~v~a~~~~ 265 (269)
||||||||||++|||+|++++++++
T Consensus 261 PVPGGVGp~T~a~L~~N~~~a~~~~ 285 (287)
T PRK14181 261 PVPGGVGPMTVAMLMRNTWESYLRH 285 (287)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999865
No 15
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=7.2e-78 Score=545.25 Aligned_cols=261 Identities=47% Similarity=0.772 Sum_probs=248.1
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHH
Q 024306 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (269)
Q Consensus 5 ~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~ 84 (269)
.|++|+||+|++|+||+|.+|+++|.++|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.+
T Consensus 28 ~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~ 107 (297)
T PRK14167 28 AGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDRE 107 (297)
T ss_pred CCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC----C
Q 024306 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----H 160 (269)
Q Consensus 85 i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~----g 160 (269)
++++|+|+|||||+|+.|.|+++.| ...|+||||.|++++|++|+++++||+|+|||||..||||++++|.++ +
T Consensus 108 i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~ 185 (297)
T PRK14167 108 VLRRIDPAKDVDGFHPENVGRLVAG--DARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGN 185 (297)
T ss_pred HHhccCcccCcccCChhhhHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCC
Confidence 9999999999999999999999976 468999999999999999999999999999999999999999999988 8
Q ss_pred CEEEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceec
Q 024306 161 ATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVIT 240 (269)
Q Consensus 161 a~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~t 240 (269)
|+||+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+|+..+. +.+|++++|||||+++.++++++|
T Consensus 186 aTVtvchs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gaiVIDvGin~~~~~-~~~g~kl~GDVd~e~v~~~a~~iT 264 (297)
T PRK14167 186 ATVTVCHSRTDDLAAKTRRADIVVAAAGVPELIDGSMLSEGATVIDVGINRVDAD-TEKGYELVGDVEFESAKEKASAIT 264 (297)
T ss_pred CEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccccCcc-cccCCceeecCcHHHHHhhceEec
Confidence 9999999999999999999999999999999999999999999999999996321 112347999999999999999999
Q ss_pred ccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 241 PVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 241 pvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
||||||||||++|||+|+++++++..+.
T Consensus 265 PVPGGVGpvT~a~L~~N~~~a~~~~~~~ 292 (297)
T PRK14167 265 PVPGGVGPMTRAMLLYNTVKAASLQEGV 292 (297)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999987664
No 16
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.7e-78 Score=543.92 Aligned_cols=256 Identities=49% Similarity=0.769 Sum_probs=247.4
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.|++|+|++|++|+||+|.+|+++|.|+|+++||+++.+.||++++++||++.|++||+|++||||+||+|||+|+++.
T Consensus 27 ~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~ 106 (286)
T PRK14184 27 RHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQ 106 (286)
T ss_pred ccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHH
Confidence 44789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh----C
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----H 159 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~----~ 159 (269)
+++++|+|+|||||+|+.|.|+|+.| .+.|+||||.|++++|++|+++++||+|+|||||..||+|++++|.+ +
T Consensus 107 ~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~ 184 (286)
T PRK14184 107 RCLELIDPAKDVDGFHPENMGRLALG--LPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFA 184 (286)
T ss_pred HHHhccCcccCcccCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccC
Confidence 99999999999999999999999976 56799999999999999999999999999999999999999999999 8
Q ss_pred CCEEEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHccee
Q 024306 160 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVI 239 (269)
Q Consensus 160 ga~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~ 239 (269)
||+|++||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++.++ +++|||||+++.++++++
T Consensus 185 ~AtVt~~hs~t~~l~~~~~~ADIVI~AvG~p~li~~~~vk~GavVIDVGi~~~~~-------~l~GDVdf~~v~~~a~~i 257 (286)
T PRK14184 185 NATVTVCHSRTPDLAEECREADFLFVAIGRPRFVTADMVKPGAVVVDVGINRTDD-------GLVGDCDFEGLSDVASAI 257 (286)
T ss_pred CCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeeeccCC-------CccCCccHHHHHhhceEe
Confidence 9999999999999999999999999999999999999999999999999999643 699999999999999999
Q ss_pred cccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 240 TPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 240 tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
|||||||||||++|||+|+++++++..|+
T Consensus 258 TPVPGGVGp~Tva~Ll~N~~~a~~~~~~~ 286 (286)
T PRK14184 258 TPVPGGVGPMTIAQLLVNTVQSWKERVGL 286 (286)
T ss_pred cCCCCCChHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999987764
No 17
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=7e-78 Score=542.77 Aligned_cols=254 Identities=52% Similarity=0.838 Sum_probs=246.7
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i 85 (269)
|++|+|++|++|+||+|..|+++|.|+|+++||+++.+.||++++++||++.|++||+|++||||+||+|||+|+++.++
T Consensus 30 g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i 109 (284)
T PRK14190 30 GIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAV 109 (284)
T ss_pred CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEE
Q 024306 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSI 165 (269)
Q Consensus 86 ~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti 165 (269)
+++|+|+|||||+|+.|.|+++.| ..+|+||||.|++++|++|+++++||+|+|||||..||+|++++|.++||+||+
T Consensus 110 ~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~ 187 (284)
T PRK14190 110 IERISPEKDVDGFHPINVGRMMLG--QDTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTY 187 (284)
T ss_pred HhcCCccccccccCHhhHHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEE
Confidence 999999999999999999999976 568999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCc
Q 024306 166 VHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGG 245 (269)
Q Consensus 166 ~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgG 245 (269)
||++|+++.+.+++|||||+|+|+|++++++|+++|++|||+|+++..+ ++++|||||+++.++++++||||||
T Consensus 188 chs~t~~l~~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~~~~------gkl~GDvd~e~v~~~a~~iTPVPGG 261 (284)
T PRK14190 188 CHSKTKNLAELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNRLEN------GKLCGDVDFDNVKEKASYITPVPGG 261 (284)
T ss_pred EeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccccCC------CCeeccCcHHHHhhhceEecCCCCC
Confidence 9999999999999999999999999999999999999999999998643 1899999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHhC
Q 024306 246 VGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 246 vGp~T~~mLl~n~v~a~~~~~~ 267 (269)
|||+|++|||+|+++++++|.+
T Consensus 262 VGpvT~a~L~~N~~~a~~~~~~ 283 (284)
T PRK14190 262 VGPMTITMLMHNTVELAKRAGG 283 (284)
T ss_pred ChHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999875
No 18
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.6e-78 Score=542.03 Aligned_cols=248 Identities=39% Similarity=0.708 Sum_probs=240.7
Q ss_pred CCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHH
Q 024306 7 KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL 86 (269)
Q Consensus 7 ~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~ 86 (269)
.+|+|++|++|+||+|..|+++|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.+++
T Consensus 31 ~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~ 110 (278)
T PRK14172 31 SIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKIT 110 (278)
T ss_pred CCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE
Q 024306 87 DAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 166 (269)
Q Consensus 87 ~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~ 166 (269)
++|+|+|||||+|+.|.|+++.| ..+|+||||.|++++|++|+++++||+|+|||||..||+|++++|.++||+||+|
T Consensus 111 ~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~c 188 (278)
T PRK14172 111 NKIDANKDIDCLTFISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTIC 188 (278)
T ss_pred hccCcccccCccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEe
Confidence 99999999999999999999977 5679999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCcc
Q 024306 167 HALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGV 246 (269)
Q Consensus 167 ~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGv 246 (269)
|++|+++.+.+++|||||+|+|+|++++++|+++|++|||+|+|+..+ +++|||||+++.++++++|||||||
T Consensus 189 hs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~g-------kl~GDvd~~~v~~~a~~iTPVPGGV 261 (278)
T PRK14172 189 HSKTKNLKEVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSSVNG-------KITGDVNFDKVIDKASYITPVPGGV 261 (278)
T ss_pred CCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCcEEEEeeccccCC-------ceeeeccHHHHHhhccEecCCCCCc
Confidence 999999999999999999999999999999999999999999998633 8999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHH
Q 024306 247 GPMTVAMLLSNTLDSAK 263 (269)
Q Consensus 247 Gp~T~~mLl~n~v~a~~ 263 (269)
||||++|||+|++++++
T Consensus 262 Gp~T~a~L~~N~~~a~~ 278 (278)
T PRK14172 262 GSLTTTLLIKNVCEALK 278 (278)
T ss_pred cHHHHHHHHHHHHHhcC
Confidence 99999999999999863
No 19
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1e-77 Score=544.22 Aligned_cols=261 Identities=49% Similarity=0.760 Sum_probs=247.6
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCH
Q 024306 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (269)
Q Consensus 3 ~~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~ 82 (269)
++.|++|+|++|++|+||+|..|+++|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++
T Consensus 27 ~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIivq~PLP~~i~~ 106 (297)
T PRK14186 27 PKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQDERVDGILLQLPLPKHLDE 106 (297)
T ss_pred HhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE
Q 024306 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT 162 (269)
Q Consensus 83 ~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~ 162 (269)
.+++++|+|+|||||+|+.|.|+++.| ...|.||||.|++++|++|+++++||+|+|||||..||+|++++|.++||+
T Consensus 107 ~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~at 184 (297)
T PRK14186 107 VPLLHAIDPDKDADGLHPLNLGRLVKG--EPGLRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANAT 184 (297)
T ss_pred HHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCE
Confidence 999999999999999999999999976 457999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceeccc
Q 024306 163 VSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPV 242 (269)
Q Consensus 163 Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpv 242 (269)
||+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++..++. .. ++++|||||+++.++++++|||
T Consensus 185 Vtv~hs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~~~~-~~-gkl~GDvd~~~v~~~a~~iTPV 262 (297)
T PRK14186 185 VTIAHSRTQDLASITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHRLPSSD-GK-TRLCGDVDFEEVEPVAAAITPV 262 (297)
T ss_pred EEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEeccccccccc-cC-CceeCCccHHHHHhhceEecCC
Confidence 999999999999999999999999999999999999999999999999864321 11 2899999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHhC
Q 024306 243 PGGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 243 pgGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
||||||+|++|||+|+++++++..+
T Consensus 263 PGGVGp~T~a~L~~Nl~~a~~~~~~ 287 (297)
T PRK14186 263 PGGVGPMTVTMLLVNTVLSWQKRHG 287 (297)
T ss_pred CCCchHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999987643
No 20
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.8e-77 Score=539.08 Aligned_cols=251 Identities=43% Similarity=0.744 Sum_probs=242.8
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.+.+|+||+|++|+||+|..|+++|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.
T Consensus 29 ~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~ 108 (284)
T PRK14177 29 KNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLDPNVDGILLQHPVPSQIDER 108 (284)
T ss_pred cCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHH
Confidence 44678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+|||||+|+.|.|+++.| ...|+||||.|++++|++|+++++||+|+|||||..||+|++++|.++||+|
T Consensus 109 ~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atV 186 (284)
T PRK14177 109 AAFDRIALEKDVDGVTTLSFGKLSMG--VETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATV 186 (284)
T ss_pred HHHhccCcccccccCChhhHHHHHcC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEE
Confidence 99999999999999999999999976 5679999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++|+++++++++|||||+|+|+|++++++|+++|++|||+|+|+ +++|||||+++.++++++||||
T Consensus 187 t~chs~T~~l~~~~~~ADIvIsAvGk~~~i~~~~ik~gavVIDvGin~----------~~~GDVd~~~v~~~a~~iTPVP 256 (284)
T PRK14177 187 TLCHSKTQNLPSIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYNP----------GNVGDIEISKAKDKSSFYTPVP 256 (284)
T ss_pred EEeCCCCCCHHHHHhhCCEEEEeCCCcCccCHHHcCCCCEEEEecCcc----------cccCCcCHHHHhhhccEecCCC
Confidence 999999999999999999999999999999999999999999999987 4789999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHh
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
|||||+|++|||+|+++++++.+
T Consensus 257 GGVGp~T~a~L~~N~~~a~~~~~ 279 (284)
T PRK14177 257 GGVGPMTIAVLLLQTLYSFKEHF 279 (284)
T ss_pred CCChHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999997654
No 21
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3.6e-77 Score=536.45 Aligned_cols=253 Identities=50% Similarity=0.808 Sum_probs=244.5
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHH
Q 024306 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (269)
Q Consensus 5 ~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~ 84 (269)
.|++|+|++|++|+||+|..|++.|.|+|+++||+++.+.||++++++++++.|++||+|++||||+||+|||+|+++.+
T Consensus 28 ~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~ 107 (281)
T PRK14183 28 KNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNNPNIDGILVQLPLPKHIDTTK 107 (281)
T ss_pred CCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCccCeEEEeCCCCCCCCHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024306 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (269)
Q Consensus 85 i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vt 164 (269)
++++|+|+|||||+|+.|.|+++.| ..+|+||||.|++++|++|+++++||+|+|||+|..||+|++++|.++||+||
T Consensus 108 i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVt 185 (281)
T PRK14183 108 ILEAIDPKKDVDGFHPYNVGRLVTG--LDGFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVD 185 (281)
T ss_pred HHhccCchhcccccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEE
Confidence 9999999999999999999999976 57899999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCC
Q 024306 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPG 244 (269)
Q Consensus 165 i~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpg 244 (269)
+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+|+..+ ++++|||||+++.++++++|||||
T Consensus 186 i~hs~T~~l~~~~~~ADIvV~AvGkp~~i~~~~vk~gavvIDvGin~~~~------gkl~GDVd~~~~~~~a~~iTPVPG 259 (281)
T PRK14183 186 ICHIFTKDLKAHTKKADIVIVGVGKPNLITEDMVKEGAIVIDIGINRTED------GRLVGDVDFENVAKKCSYITPVPG 259 (281)
T ss_pred EeCCCCcCHHHHHhhCCEEEEecCcccccCHHHcCCCcEEEEeeccccCC------CCeECCccHHHHHhhceEecCCCC
Confidence 99999999999999999999999999999999999999999999998533 289999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHH
Q 024306 245 GVGPMTVAMLLSNTLDSAKRA 265 (269)
Q Consensus 245 GvGp~T~~mLl~n~v~a~~~~ 265 (269)
||||+|++|||+|+++++++.
T Consensus 260 GVGpvT~a~L~~N~~~a~~~~ 280 (281)
T PRK14183 260 GVGPMTIAMLLSNTLKAAKNR 280 (281)
T ss_pred CChHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998753
No 22
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8.5e-77 Score=535.96 Aligned_cols=255 Identities=50% Similarity=0.814 Sum_probs=246.8
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i 85 (269)
|++|+|++|++|+||+|..|+++|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.++
T Consensus 30 g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i 109 (285)
T PRK14189 30 GHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKV 109 (285)
T ss_pred CCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEE
Q 024306 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSI 165 (269)
Q Consensus 86 ~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti 165 (269)
+++|+|+|||||+|+.|.|+++.+ ...|+||||.|++++|++|+++++||+|+|||+|+.||+|++++|.++||+||+
T Consensus 110 ~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~ 187 (285)
T PRK14189 110 IEAIAPEKDVDGFHVANAGALMTG--QPLFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTI 187 (285)
T ss_pred HhhcCcccCcccCChhhhhHhhCC--CCCCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEE
Confidence 999999999999999999999976 568999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCc
Q 024306 166 VHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGG 245 (269)
Q Consensus 166 ~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgG 245 (269)
||++|+++.+.+++|||||+|+|.|++++++|+++|++|||+|+++..+ ++++|||||+++.++++++||||||
T Consensus 188 ~hs~t~~l~~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~~~~------gkl~GDVd~~~v~~~a~~iTPVPGG 261 (285)
T PRK14189 188 CHSKTRDLAAHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNRDDA------GKLCGDVDFAGVKEVAGYITPVPGG 261 (285)
T ss_pred ecCCCCCHHHHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccccCC------CCeeCCccHHHHHhhceEecCCCCC
Confidence 9999999999999999999999999999999999999999999998633 2899999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHhCC
Q 024306 246 VGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 246 vGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
|||+|++|||+|++++++++...
T Consensus 262 VGp~T~a~Ll~N~~~a~~~~~~~ 284 (285)
T PRK14189 262 VGPMTITMLLVNTIEAAERAAAA 284 (285)
T ss_pred chHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999988753
No 23
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9.3e-77 Score=534.99 Aligned_cols=253 Identities=47% Similarity=0.795 Sum_probs=243.5
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i 85 (269)
|++|+||+|++|+||+|..|++.|.++|+++||+++.+.||++++++||++.|++||+|++||||+||+|||+|+++.++
T Consensus 30 g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D~~V~GIlvqlPlP~~id~~~i 109 (284)
T PRK14193 30 GITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNADPACTGYIVQLPLPKHLDENAV 109 (284)
T ss_pred CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh--CCCEE
Q 024306 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR--HHATV 163 (269)
Q Consensus 86 ~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~--~ga~V 163 (269)
+++|+|+|||||+|+.|.|+++.+ ...|+||||.|++++|++|+++++||+|+|||||..||+|++++|.+ +||+|
T Consensus 110 ~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atV 187 (284)
T PRK14193 110 LERIDPAKDADGLHPTNLGRLVLN--EPAPLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATV 187 (284)
T ss_pred HhcCCcccCccCCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEE
Confidence 999999999999999999999976 46789999999999999999999999999999999999999999998 79999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++..+ ++++|||| +++.++++++||||
T Consensus 188 tvchs~T~~l~~~~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvGin~~~~------gkl~GDvd-~~v~~~a~~iTPVP 260 (284)
T PRK14193 188 TLCHTGTRDLAAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSRAGD------GKLVGDVH-PDVWEVAGAVSPNP 260 (284)
T ss_pred EEeCCCCCCHHHHHHhCCEEEEecCCcCccCHHHcCCCCEEEEccccccCC------CcEEeecC-HhHHhhCCEEeCCC
Confidence 999999999999999999999999999999999999999999999998533 28999999 88899999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHhC
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
|||||||++|||+|+++++++..|
T Consensus 261 GGVGp~T~a~L~~N~~~a~~~~~~ 284 (284)
T PRK14193 261 GGVGPMTRAFLLTNVVERAERRAG 284 (284)
T ss_pred CChhHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999987654
No 24
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9.9e-77 Score=535.05 Aligned_cols=253 Identities=45% Similarity=0.790 Sum_probs=244.1
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.|++|+||+|++|+||+|..|+++|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.
T Consensus 34 ~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlvqlPLP~~i~~~ 113 (287)
T PRK14176 34 NRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKRKDVHGILLQLPLPKHLDPQ 113 (287)
T ss_pred ccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHH
Confidence 34889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+|||||+|+.|.|+++.| ...|+||||+|++++|++|+++++||+|+|||+|..||+|++++|.++||+|
T Consensus 114 ~i~~~I~p~KDVDGl~~~N~g~l~~g--~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atV 191 (287)
T PRK14176 114 EAMEAIDPAKDADGFHPYNMGKLMIG--DEGLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATV 191 (287)
T ss_pred HHHhccCccccccccChhhhhhHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEE
Confidence 99999999999999999999999976 4679999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+|+..+ +++|||||+.+.++++++||||
T Consensus 192 tv~hs~T~~l~~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin~~~g-------kl~GDvd~~~~~~~a~~iTPVP 264 (287)
T PRK14176 192 SVCHVFTDDLKKYTLDADILVVATGVKHLIKADMVKEGAVIFDVGITKEED-------KVYGDVDFENVIKKASLITPVP 264 (287)
T ss_pred EEEeccCCCHHHHHhhCCEEEEccCCccccCHHHcCCCcEEEEecccccCC-------CccCCcCHHHHHhhceEcCCCC
Confidence 999999999999999999999999999999999999999999999997522 8999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHH
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRA 265 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~ 265 (269)
|||||+|++|||+|+++++++.
T Consensus 265 GGVGp~T~a~L~~n~~~a~~~~ 286 (287)
T PRK14176 265 GGVGPLTIAMLMKHVLMCAEKS 286 (287)
T ss_pred CCChHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998753
No 25
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.4e-76 Score=534.59 Aligned_cols=256 Identities=45% Similarity=0.741 Sum_probs=243.5
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHH
Q 024306 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (269)
Q Consensus 5 ~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~ 84 (269)
.+++|+|++|+||+||+|.+|+++|.++|+++||+++.+.||++++++||++.|++||+|++||||+||+|||+|+++.+
T Consensus 26 l~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~ 105 (287)
T PRK14173 26 LPFVPHLRVVRLGEDPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLELIARLNADPEVDGILVQLPLPPHIDFQR 105 (287)
T ss_pred hCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024306 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (269)
Q Consensus 85 i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vt 164 (269)
++++|+|+|||||+|+.|.|+++.| ...|+||||.|++++|++|+++++||+|+|||+|..||+|++++|.++||+||
T Consensus 106 i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt 183 (287)
T PRK14173 106 VLEAIDPLKDVDGFHPLNVGRLWMG--GEALEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVT 183 (287)
T ss_pred HHhccCccccccccChhhhHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEE
Confidence 9999999999999999999999976 46799999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCce--eecccchHHHhhHcceeccc
Q 024306 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYR--LMGDVCYEEAMRLASVITPV 242 (269)
Q Consensus 165 i~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~--l~GDvd~~~~~~~~~~~tpv 242 (269)
+||++|+++++.+++|||||+|+|+|++++++|+++|++|||+|+|+..++++ + ++|||| .++.++++++|||
T Consensus 184 ichs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~~~~~~g----k~~l~GDVd-~~v~~~a~~iTPV 258 (287)
T PRK14173 184 LAHSKTQDLPAVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINRVGGNGG----RDILTGDVH-PEVAEVAGALTPV 258 (287)
T ss_pred EeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCccccCCCC----ceeeecccc-HhHHhhCcEEecC
Confidence 99999999999999999999999999999999999999999999998622122 5 999999 5789999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHhC
Q 024306 243 PGGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 243 pgGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
||||||+|++|||+|+++++++..+
T Consensus 259 PGGVGp~T~a~L~~N~~~a~~~~~~ 283 (287)
T PRK14173 259 PGGVGPMTVAMLMANTVIAALRRRG 283 (287)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999986543
No 26
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.4e-76 Score=534.06 Aligned_cols=256 Identities=50% Similarity=0.806 Sum_probs=246.7
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.+++|+|++|+||+||+|..|+++|.|+|+++||+++.+.||++++++||++.|++||+|++||||+||+|||+|+++.
T Consensus 29 ~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~ 108 (285)
T PRK10792 29 AGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADPTIDGILVQLPLPAHIDNV 108 (285)
T ss_pred cCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHH
Confidence 34778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+|||||+|+.|.|+|+.| ..+|+||||.|++++|++|+++++||+|+|||+|..||+|++++|.++||+|
T Consensus 109 ~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atV 186 (285)
T PRK10792 109 KVLERIHPDKDVDGFHPYNVGRLAQR--IPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTV 186 (285)
T ss_pred HHHhccCcccccCccChhhHhHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeE
Confidence 99999999999999999999999876 5679999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++|+++.+.+++|||||+|+|+|++++++|+++|++|||+|+|+..+ ++++|||||+.+.++++++||||
T Consensus 187 tv~hs~T~~l~~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin~~~~------gk~~GDvd~~~~~~~a~~itPvP 260 (285)
T PRK10792 187 TVCHRFTKNLRHHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLED------GKLVGDVEFETAAERASWITPVP 260 (285)
T ss_pred EEEECCCCCHHHHHhhCCEEEEcCCCcccccHHHcCCCcEEEEcccccccC------CCcCCCcCHHHHHhhccCcCCCC
Confidence 999999999999999999999999999999999999999999999998643 17999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHhC
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
|||||+|++|||+|+++++++|..
T Consensus 261 GGVGp~T~a~L~~N~~~a~~~~~~ 284 (285)
T PRK10792 261 GGVGPMTVATLLENTLQACEEYHD 284 (285)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999864
No 27
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.4e-76 Score=534.12 Aligned_cols=255 Identities=50% Similarity=0.776 Sum_probs=245.8
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.|++|+|++|++|+||+|.+|+++|.++|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.
T Consensus 27 ~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~ 106 (285)
T PRK14191 27 QTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTK 106 (285)
T ss_pred cCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+|||||+|+.|.|+++.| ..+|+||||.|++++|++|+++++||+|+|||+|..||+|++++|.++||+|
T Consensus 107 ~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtV 184 (285)
T PRK14191 107 MVLEAIDPNKDVDGFHPLNIGKLCSQ--LDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASV 184 (285)
T ss_pred HHHhcCCccccccccChhhHHHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEE
Confidence 99999999999999999999999976 5689999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++|+++.+++++|||||+|+|.|++++++|+++|++|||+|+++..+ ++++|||||+++.++++++||||
T Consensus 185 tv~hs~t~~l~~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~~~~------gklvGDvd~e~v~~~a~~iTPVP 258 (285)
T PRK14191 185 SVCHILTKDLSFYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINRLND------GRLVGDVDFENVAPKASFITPVP 258 (285)
T ss_pred EEEeCCcHHHHHHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeecccccC------CceeccccHHHHhhhccEEecCC
Confidence 999999999999999999999999999999999999999999999998633 28999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHh
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
|||||+|++|||+|+++++++..
T Consensus 259 GGVGpvT~a~L~~N~~~a~~~~~ 281 (285)
T PRK14191 259 GGVGPMTIVSLLENTLIAAEKRQ 281 (285)
T ss_pred CCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998653
No 28
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.8e-76 Score=533.79 Aligned_cols=264 Identities=51% Similarity=0.817 Sum_probs=248.2
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.|++|+|++|++|+||+|..|+++|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.
T Consensus 27 ~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~ 106 (295)
T PRK14174 27 KTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEF 106 (295)
T ss_pred ccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHH
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh----C
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----H 159 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~----~ 159 (269)
+++++|+|+|||||+|+.|.|+++.|+...+|+||||.|++++|++|+++++||+|+|||||..||+|++++|.+ +
T Consensus 107 ~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~ 186 (295)
T PRK14174 107 AVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKES 186 (295)
T ss_pred HHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccC
Confidence 999999999999999999999999775347899999999999999999999999999999999999999999988 7
Q ss_pred CCEEEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHccee
Q 024306 160 HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVI 239 (269)
Q Consensus 160 ga~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~ 239 (269)
+++|++||++|.++.+++++|||||+|+|+|++++++|+++|++|||+|+++..++.++.|++++|||||+++.++++++
T Consensus 187 ~atVt~~hs~t~~l~~~~~~ADIvI~Avg~~~li~~~~vk~GavVIDVgi~~~~~~~~~~g~kl~GDVd~~~v~~~a~~i 266 (295)
T PRK14174 187 NCTVTICHSATKDIPSYTRQADILIAAIGKARFITADMVKPGAVVIDVGINRIEDPSTKSGYRLVGDVDYEGVSAKASAI 266 (295)
T ss_pred CCEEEEEeCCchhHHHHHHhCCEEEEecCccCccCHHHcCCCCEEEEeeccccccccccCCCceECCcCHHHHHhhccEe
Confidence 89999999999999999999999999999999999999999999999999986432222234899999999999999999
Q ss_pred cccCCcccHHHHHHHHHHHHHHHHHHhC
Q 024306 240 TPVPGGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 240 tpvpgGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
|||||||||+|++|||+|+++++++...
T Consensus 267 TPVPGGVGp~T~a~L~~Nl~~a~~~~~~ 294 (295)
T PRK14174 267 TPVPGGVGPMTIAMLLKNTLQSFERVNN 294 (295)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999987653
No 29
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.3e-76 Score=531.18 Aligned_cols=256 Identities=48% Similarity=0.794 Sum_probs=247.2
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.|++|+|++|++|+||+|..|+++|.++|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.
T Consensus 28 ~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~ 107 (284)
T PRK14179 28 EKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEE 107 (284)
T ss_pred ccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHH
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+|||||+|+.|.|+++.| .++|+||||.|++++|++|+++++||+|+|||+|+.||+|++.+|.++|++|
T Consensus 108 ~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatV 185 (284)
T PRK14179 108 KILLAIDPKKDVDGFHPMNTGHLWSG--RPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATV 185 (284)
T ss_pred HHHhccCccccccccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEE
Confidence 99999999999999999999999976 5779999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
++||++++++++.+++|||||+|+|.|++++++|+++|++|||+|+|+..+ ++++|||||+++.++++++||||
T Consensus 186 tv~~s~t~~l~~~~~~ADIVI~avg~~~~v~~~~ik~GavVIDvgin~~~~------gkl~GDVdf~~v~~~a~~iTPVP 259 (284)
T PRK14179 186 TLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFVKEGAVVIDVGMNRDEN------GKLIGDVDFDEVAEVASYITPVP 259 (284)
T ss_pred EEECCCCCCHHHHHhhCCEEEEecCccccCCHHHccCCcEEEEecceecCC------CCeecCccHHHHHhhccEecCCC
Confidence 999999999999999999999999999999999999999999999998643 28999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHhC
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
|||||+|++|||+|+++++++|+-
T Consensus 260 GGVGp~T~a~L~~N~~~a~~~~~~ 283 (284)
T PRK14179 260 GGVGPMTITMLMEQTYQAALRSLH 283 (284)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999974
No 30
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=7.3e-76 Score=530.55 Aligned_cols=255 Identities=49% Similarity=0.815 Sum_probs=246.3
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i 85 (269)
|++|+|++|+||+||+|.+|+++|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.++
T Consensus 30 g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i 109 (286)
T PRK14175 30 GFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKI 109 (286)
T ss_pred CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEE
Q 024306 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSI 165 (269)
Q Consensus 86 ~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti 165 (269)
+++|+|+|||||+|+.|.|+|+.| ..+|+||||.|++++|++|+++++||+|+|||+|+.||+|++++|.++||+|++
T Consensus 110 ~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv 187 (286)
T PRK14175 110 LEAINPEKDVDGFHPINIGKLYID--EQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTI 187 (286)
T ss_pred HhccCcccCcccCCccchHhHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEE
Confidence 999999999999999999999976 568999999999999999999999999999999998899999999999999999
Q ss_pred EeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCc
Q 024306 166 VHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGG 245 (269)
Q Consensus 166 ~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgG 245 (269)
||++|+++.+++++|||||+|+|+|++++++|+++|++|||+|+++..+ ++++|||||+++.++++++||||||
T Consensus 188 ~~s~t~~l~~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~~~~------gkl~GDvd~~~~~~~a~~iTPVPGG 261 (286)
T PRK14175 188 LHSRSKDMASYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTPDEN------GKLKGDVDYDAVKEIAGAITPVPGG 261 (286)
T ss_pred EeCCchhHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCcCCC------CCeecCccHHHHHhhccCcCCCCCC
Confidence 9999999999999999999999999999999999999999999998533 2899999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHhCC
Q 024306 246 VGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 246 vGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
|||+|++|||+|+++++++..++
T Consensus 262 VGp~T~a~L~~n~~~a~~~~~~~ 284 (286)
T PRK14175 262 VGPLTITMVLNNTLLAEKMRRGI 284 (286)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999987665
No 31
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5.4e-75 Score=522.37 Aligned_cols=252 Identities=48% Similarity=0.761 Sum_probs=243.9
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHH
Q 024306 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (269)
Q Consensus 5 ~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~ 84 (269)
.|++|+||+|+||+||+|.+|+++|.|+|+++||+++.+.||++++++||++.|++||+|++||||+||+|||+|+++.+
T Consensus 23 lg~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~ 102 (279)
T PRK14178 23 SGLYPRLATVIVGDDPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTER 102 (279)
T ss_pred hCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024306 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (269)
Q Consensus 85 i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vt 164 (269)
++++|+|+|||||+|+.|.|+++.| ..+|+||||.|++++|++|+++++||+|+|+|+|..||||++++|.++||+|+
T Consensus 103 v~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVt 180 (279)
T PRK14178 103 VIAAILPEKDVDGFHPLNLGRLVSG--LPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVT 180 (279)
T ss_pred HHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeE
Confidence 9999999999999999999999976 57899999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCC
Q 024306 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPG 244 (269)
Q Consensus 165 i~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpg 244 (269)
+||++|+++.+.+++||+||+|+|+|++++++|+++|++|||+|+++.++ +++|||||+++.++++++|||||
T Consensus 181 v~hs~t~~L~~~~~~ADIvI~Avgk~~lv~~~~vk~GavVIDVgi~~~~g-------kl~GDvdf~~~~~~a~~iTPVPG 253 (279)
T PRK14178 181 ICHSKTENLKAELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQVNG-------KLCGDVDFDAVKEIAGAITPVPG 253 (279)
T ss_pred EEecChhHHHHHHhhCCEEEECCCcccccCHHHcCCCcEEEEeeccccCC-------CCcCCccHHHHHhhccCcCCCCC
Confidence 99999999999999999999999999999999999999999999998532 89999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHH
Q 024306 245 GVGPMTVAMLLSNTLDSAKRA 265 (269)
Q Consensus 245 GvGp~T~~mLl~n~v~a~~~~ 265 (269)
||||+|++|||+|+++++++.
T Consensus 254 GVGp~T~a~L~~N~~~a~~~~ 274 (279)
T PRK14178 254 GVGPMTIATLMENTFDAAKMR 274 (279)
T ss_pred CCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998753
No 32
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.8e-74 Score=523.90 Aligned_cols=257 Identities=48% Similarity=0.817 Sum_probs=246.2
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i 85 (269)
|++|+|++|++|+||+|..|++.|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.++
T Consensus 31 g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i 110 (301)
T PRK14194 31 GIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARV 110 (301)
T ss_pred CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEE
Q 024306 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSI 165 (269)
Q Consensus 86 ~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti 165 (269)
+++|+|+|||||+|+.|.|+++.| .++|+||||.|++++|++|+++++||+|+|||+|+.||+|++.+|.++|++|++
T Consensus 111 ~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv 188 (301)
T PRK14194 111 LQAINPLKDVDGFHSENVGGLSQG--RDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTV 188 (301)
T ss_pred HhccCchhccCccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEE
Confidence 999999999999999999999976 568999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCc
Q 024306 166 VHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGG 245 (269)
Q Consensus 166 ~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgG 245 (269)
||++++++++.+++|||||+++|.|++++++|+++|++|||+++|+..+. + .++++|||||+++.++++++||||||
T Consensus 189 ~~~~t~~l~e~~~~ADIVIsavg~~~~v~~~~ik~GaiVIDvgin~~~~~-g--~~kl~GDvdf~~~~~~a~~iTPVPGG 265 (301)
T PRK14194 189 VHSRSTDAKALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGINRIDDD-G--RSRLVGDVDFDSALPVVSAITPVPGG 265 (301)
T ss_pred ECCCCCCHHHHHhcCCEEEEecCChhcccHhhccCCcEEEEecccccCCC-C--CcceecccchHHHHhhcceecCCCCc
Confidence 99999999999999999999999999999999999999999999985321 1 12799999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHhC
Q 024306 246 VGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 246 vGp~T~~mLl~n~v~a~~~~~~ 267 (269)
|||||++|||+|+++++++|..
T Consensus 266 VGp~Tva~L~~N~~~a~~~~~~ 287 (301)
T PRK14194 266 VGPMTIAFLMKNTVTAARLQAH 287 (301)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999864
No 33
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5.3e-73 Score=514.94 Aligned_cols=260 Identities=49% Similarity=0.799 Sum_probs=245.4
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHH
Q 024306 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (269)
Q Consensus 5 ~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~ 84 (269)
.|++|+|++|++|+||+|..|+++|.|+|+++||+++.+.||++++++|+++.|++||+|++||||+||+|||+|+++.+
T Consensus 29 ~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~ 108 (296)
T PRK14188 29 HGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEA 108 (296)
T ss_pred cCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024306 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (269)
Q Consensus 85 i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vt 164 (269)
++++|+|+|||||+|+.|.|+++.| ..+|+||||.|++++|++|+++++||+|+|||+++.+|+|+|.+|.++|++|+
T Consensus 109 i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVt 186 (296)
T PRK14188 109 VIQAIDPEKDVDGLHVVNAGRLATG--ETALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVT 186 (296)
T ss_pred HHhccCcccccccCChhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEE
Confidence 9999999999999999999999976 57899999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCc-eeecccchHHHhhHcceecccC
Q 024306 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGY-RLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 165 i~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~-~l~GDvd~~~~~~~~~~~tpvp 243 (269)
+||++|+++.+.+++|||||+++|.|++++++|+++|++|||+|+++..++++.+|+ +++|||||+++.++++++||||
T Consensus 187 v~~~rT~~l~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~~~~~~~~~g~~~l~GDvd~~~v~~~a~~iTPVP 266 (296)
T PRK14188 187 IAHSRTRDLPAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINRIPAPEKGEGKTRLVGDVAFAEAAEVAGAITPVP 266 (296)
T ss_pred EECCCCCCHHHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcccCCccccCCCceeeCCCCHHHHHhhccEecCCC
Confidence 999888899999999999999999999999999999999999999985321111122 6999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHh
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
|||||||++|||+|+++++++..
T Consensus 267 GGVGp~T~a~L~~N~~~a~~~~~ 289 (296)
T PRK14188 267 GGVGPMTIACLLANTLTAACRAA 289 (296)
T ss_pred CChhHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998653
No 34
>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]
Probab=100.00 E-value=2.8e-72 Score=531.45 Aligned_cols=263 Identities=52% Similarity=0.849 Sum_probs=257.7
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
.-+++|.|+|||||++++|..|+++|.|++++.||++.++.||+++++-|++..|.+||+|+.||||+||+|||.|+|++
T Consensus 30 ~PnF~p~LaIiQVGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~ell~~I~~lNeD~tvHGiiVQLPLp~hide~ 109 (935)
T KOG4230|consen 30 HPNFKPVLAIIQVGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGELLREIKALNEDPTVHGIIVQLPLPAHIDED 109 (935)
T ss_pred CCCCCceEEEEEecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHHHHHHHhccCCCccceEEEeccCccccchh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
.+.++|+|+||||||+..|.|+|..++.++.|+||||.||+++|+++++.+.||+++|+|||.+||.|++.+|...+++|
T Consensus 110 ~Vt~aI~peKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a~v~v~Gk~aVVlGRS~IVG~Pia~LL~~~NaTV 189 (935)
T KOG4230|consen 110 TVTEAIDPEKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEAGVFVAGKNAVVLGRSKIVGSPIAALLLWANATV 189 (935)
T ss_pred hHhhccCcccccccccccchhhhhccCCCceeeccChHHHHHHHHHcCCccccceeEEEecccccCChHHHHHHhcCceE
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++|+++.+.+.+|||||.|+|.|+|++.||+|||++|||+|+|...++++.+|++++|||||+++.+.++++||||
T Consensus 190 TiCHSKT~~lae~v~~ADIvIvAiG~PefVKgdWiKpGavVIDvGINyvpD~~Kksg~klvGDVdfe~Akevas~ITPVP 269 (935)
T KOG4230|consen 190 TICHSKTRNLAEKVSRADIVIVAIGQPEFVKGDWIKPGAVVIDVGINYVPDPSKKSGFKLVGDVDFESAKEVASFITPVP 269 (935)
T ss_pred EEecCCCccHHHHhccCCEEEEEcCCcceeecccccCCcEEEEccccccCCCCCcccceEeeecchHhhhhhhhccccCC
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHh
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
|||||||++|||+|++++++|+.
T Consensus 270 GGVGPMTVAMLmqNtveaAKR~r 292 (935)
T KOG4230|consen 270 GGVGPMTVAMLMQNTVEAAKRQR 292 (935)
T ss_pred CCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999875
No 35
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.1e-71 Score=505.23 Aligned_cols=255 Identities=42% Similarity=0.713 Sum_probs=244.7
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.|++|+|++|++|+||+|.+|++.|+++|+++||+++|+.||+++++++|.+.|++||+|+++||||||+|||+++++.
T Consensus 29 ~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~~i~~Ln~d~~v~Gi~VqlPlp~~i~~~ 108 (283)
T PRK14192 29 KTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLAKIEELNANPDVHGILLQHPVPAQIDER 108 (283)
T ss_pred ccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCccccCHH
Confidence 44889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+||+||+|++|.|+++.| .+.|.|||+.|++++|++++++++||+|+|+|+|+.||||++++|.++||+|
T Consensus 109 ~~ld~I~~aKDVdg~n~~n~G~l~~~--~~~~~p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatV 186 (283)
T PRK14192 109 ACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATV 186 (283)
T ss_pred HHHhccCHHHhcCCCCccccCccccC--CCcccCCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999876 5678999999999999999999999999999999977999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
++|||+++++.+.+++|||||+|||.|++++.+|+++|++|+|++|+|.++ +++|||||+++.++++++||||
T Consensus 187 tv~~~~t~~L~~~~~~aDIvI~AtG~~~~v~~~~lk~gavViDvg~n~~~~-------~~~GDvd~~~~~~~a~~itPvP 259 (283)
T PRK14192 187 TICHSRTQNLPELVKQADIIVGAVGKPELIKKDWIKQGAVVVDAGFHPRDG-------GGVGDIELQGIEEIASAYTPVP 259 (283)
T ss_pred EEEeCCchhHHHHhccCCEEEEccCCCCcCCHHHcCCCCEEEEEEEeecCC-------CCcccccHHHhhccceEeCCCC
Confidence 999999999999999999999999999999999999999999999999643 6899999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHhC
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
|||||+|++|||+|+++++++.+|
T Consensus 260 GGVGp~T~a~L~~n~~~~~~~~~~ 283 (283)
T PRK14192 260 GGVGPMTINTLIRQTVEAAEKALG 283 (283)
T ss_pred CcChHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999998765
No 36
>KOG0089 consensus Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase [Coenzyme transport and metabolism]
Probab=100.00 E-value=1.2e-67 Score=463.03 Aligned_cols=267 Identities=60% Similarity=0.933 Sum_probs=254.1
Q ss_pred CCCCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCC
Q 024306 1 MKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHL 80 (269)
Q Consensus 1 ~~~~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~ 80 (269)
|++..|..|+|+.++||++|+|+.|+.+++++|+++||....+.++++.+++++++.|.++|.|++||||+||+|+|+|+
T Consensus 31 ~~~~~g~~P~L~~~lvg~~pas~~Ya~~k~kac~~vGi~s~~~~l~~~~~~~~l~~~i~~~N~d~sV~GilV~~pv~~h~ 110 (309)
T KOG0089|consen 31 MKESNGKVPGLVGFLVGEDPASQMYATNKTKACEEVGIKSFQYELPESESEDELESAIAEANNDPSVHGILVQLPVPQHI 110 (309)
T ss_pred HHhcCCCCCceeEEEeCCCcchHHHHHHHHHHHHHhhhcccccccccccCHHHHHHHHHHhcCCCceeeEEEEeeccccc
Confidence 46677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC-
Q 024306 81 DEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH- 159 (269)
Q Consensus 81 ~~~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~- 159 (269)
+++.+++.++++|||||+|+.|.|+|......+.|+||||.|++++|+++++.+.||+++|+|||..||+|+|.+|+..
T Consensus 111 ~eq~i~n~Vs~eKDVDgfh~~Nigrl~ld~~~~~~lPcTP~gv~eiL~r~gI~~~GKn~VVigRS~iVg~P~A~LL~~dG 190 (309)
T KOG0089|consen 111 QEQYILNAVSPEKDVDGFHPLNIGRLALDGREPLFLPCTPLGVVEILERTGIETYGKNAVVIGRSKIVGMPLALLLHNDG 190 (309)
T ss_pred cHHHHHhhcCcccccccccccchhhhccccccccccCCchHHHHHHHHHhCCeecCceEEEEcccccccchHHHHHhhcC
Confidence 9999999999999999999999999987655667999999999999999999999999999999999999999999998
Q ss_pred -------CCEEEEEeCCCC--CHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchH
Q 024306 160 -------HATVSIVHALTK--NPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYE 230 (269)
Q Consensus 160 -------ga~Vti~~~~t~--~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~ 230 (269)
.|+|+++||.|+ +++.+++.|||+|+|+|.|++++.+|+++|+.++|+++|+..+|++..+.+|+||+||+
T Consensus 191 ~~~~~~~datVti~hr~t~~~~lk~ht~~adivi~a~g~p~li~~d~Ik~Ga~vidvgin~v~dp~~a~~~klvgdvdFe 270 (309)
T KOG0089|consen 191 AHVYSVDDATVTIFHRYTSKPQLKHHTRDADIVISAVGIPNLITSDMIKPGAAVIDVGINRVHDPSTAVGIKLVGDVDFE 270 (309)
T ss_pred CcccccCcceEEEEEcCCCchhHHHHHHhcceeehhcCCCcccccceeecCceeEecCCCcccccccceeeEEeeeccHH
Confidence 578999999985 46889999999999999999999999999999999999999998876677999999999
Q ss_pred HHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhC
Q 024306 231 EAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 231 ~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
.+..+++++||||||+||||++|||+|+++++++.+.
T Consensus 271 ~~~~kag~itpVPggvGpmTiAMLl~Ntl~~ak~v~~ 307 (309)
T KOG0089|consen 271 EASKKAGAITPVPGGVGPMTIAMLLRNTLRAAKRVFL 307 (309)
T ss_pred HhhhhcCccccCCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999996653
No 37
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=100.00 E-value=7.9e-49 Score=327.72 Aligned_cols=160 Identities=54% Similarity=0.872 Sum_probs=137.9
Q ss_pred ccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcC
Q 024306 99 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITS 178 (269)
Q Consensus 99 ~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~~~~~ 178 (269)
|++|.|+|+.+ ++.|+||||.|++++|++|+++++||+|+|||+|..||+|++.+|.++||+|++||++|+++++.++
T Consensus 1 hp~N~g~l~~~--~~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~ 78 (160)
T PF02882_consen 1 HPLNLGRLVSG--QPGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR 78 (160)
T ss_dssp SHHHHHHHHTT--TTSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred CcHhHHHHhCC--CCCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence 78999999976 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHH
Q 024306 179 EADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNT 258 (269)
Q Consensus 179 ~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~ 258 (269)
+|||||+|+|.|++++++|+|+|++|||+|+++... +++++|||||+++.++++++|||||||||+|++|||+|+
T Consensus 79 ~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~~~~-----~~~~~GDv~~~~~~~~a~~itPvPgGVGplT~a~L~~N~ 153 (160)
T PF02882_consen 79 RADIVVSAVGKPNLIKADWIKPGAVVIDVGINYVPG-----DGKLVGDVDFESVKEKASAITPVPGGVGPLTVAMLMKNL 153 (160)
T ss_dssp TSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEEETT-----TTEEEESB-HHHHHTTCSEEE-SSSSCHHHHHHHHHHHH
T ss_pred eccEEeeeeccccccccccccCCcEEEecCCccccc-----cceeeecccHHHhhccceEEeeCCCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999998721 238999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 024306 259 LDSAKRA 265 (269)
Q Consensus 259 v~a~~~~ 265 (269)
++++|++
T Consensus 154 v~a~~~~ 160 (160)
T PF02882_consen 154 VKAAKRQ 160 (160)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999874
No 38
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=100.00 E-value=1e-42 Score=296.99 Aligned_cols=157 Identities=31% Similarity=0.449 Sum_probs=142.1
Q ss_pred ccccccccccceecccccCCC-------CCccccCCHHHHHHHHHHhCC---------CCccceEEEEcCCcccHHHHHH
Q 024306 91 LEKDVDGFHPLNIGNLAMRGR-------EPLFIPCTPKGCIELLIRSGV---------EIMGKNAVVIGRSNIVGLPTSL 154 (269)
Q Consensus 91 p~kdvdg~~~~n~g~l~~g~~-------~~~~~p~t~~g~~~~l~~~~~---------~l~gk~v~ViG~gg~vg~~~a~ 154 (269)
|+|||||+|+.|.|+|+.+.. ...|+||||+|++++|++|++ +++||+|+|||+|..||+|++.
T Consensus 1 P~KDVDGl~~~n~g~l~~~~~~~~~~~~~~~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~ 80 (197)
T cd01079 1 PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAA 80 (197)
T ss_pred CCCCcCCCCHHHHHHHhcCCccccccccCCCccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHH
Confidence 689999999999999986531 157999999999999999976 8999999999999999999999
Q ss_pred HHHhCCCEEEEE---------------eCCC--CC----HhhhcCCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeecCC
Q 024306 155 LLQRHHATVSIV---------------HALT--KN----PEQITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 155 ~L~~~ga~Vti~---------------~~~t--~~----l~~~~~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~~~ 212 (269)
+|.++||+|++| |+++ ++ +.+.+++|||||+|+|+|++ +++||+++|++|||+|++.
T Consensus 81 lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~~- 159 (197)
T cd01079 81 LLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASIK- 159 (197)
T ss_pred HHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCCc-
Confidence 999999999999 5555 35 78999999999999999999 9999999999999999863
Q ss_pred CCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHH
Q 024306 213 DDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 265 (269)
Q Consensus 213 ~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~ 265 (269)
|+| +++.++++++||| |||+|++|||+|++++++++
T Consensus 160 -------------dvd-~~v~~~as~iTPv---VGpvTva~L~~Nlv~~~~~~ 195 (197)
T cd01079 160 -------------NFE-PSVKEKASIYVPS---IGKVTIAMLLRNLLRLYHNQ 195 (197)
T ss_pred -------------Ccc-HhHHhhcCEeCCC---cCHHHHHHHHHHHHHHHHHh
Confidence 445 5778999999987 99999999999999999865
No 39
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=100.00 E-value=1.4e-39 Score=274.63 Aligned_cols=168 Identities=58% Similarity=0.906 Sum_probs=156.4
Q ss_pred ccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 91 LEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 91 p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
|+|||||++..|.|+++.+ ...|+|||+.+++++++++..+++||+|+|||+|+++|++++++|.++|++|++++|++
T Consensus 1 ~~kdvdg~~~~~~~~~~~~--~~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 1 PEKDVDGLHPVNLGRLALG--RPGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCccccCCCccchhhHhcC--CCCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 6899999999999999855 47899999999999999999999999999999999889999999999999999999999
Q ss_pred CCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCcccHHH
Q 024306 171 KNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMT 250 (269)
Q Consensus 171 ~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T 250 (269)
+++.+.+++||+||+|||+|+++++++++++.++||++.+|..+ . ..++++||+|++.+.+++.++||+||||||+|
T Consensus 79 ~~l~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~prdvd--~-~~~~~~G~~d~~~~~~~~~~~~~~pggvgp~t 155 (168)
T cd01080 79 KNLKEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINRVPD--K-SGGKLVGDVDFESAKEKASAITPVPGGVGPMT 155 (168)
T ss_pred hhHHHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCCccc--c-cCCCeeCCcCHHHHHhhccCcCCCCCcChHHH
Confidence 99999999999999999999999999999999999999999755 1 12389999999998999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 024306 251 VAMLLSNTLDSAK 263 (269)
Q Consensus 251 ~~mLl~n~v~a~~ 263 (269)
++|||+|++++++
T Consensus 156 ~a~l~~n~~~~~~ 168 (168)
T cd01080 156 VAMLMKNTVEAAK 168 (168)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998763
No 40
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=100.00 E-value=4.3e-38 Score=257.94 Aligned_cols=137 Identities=36% Similarity=0.555 Sum_probs=128.7
Q ss_pred CCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcCCCCEEEeccCCC
Q 024306 111 REPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 111 ~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~~~~~~aDiVIsAtg~p 190 (269)
.++.|+|||++|++++|++|+++++||+|+|+|+|..+|+|++.+|.++|++|++||++|+++++++++|||||+|||++
T Consensus 3 ~~~~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~~ADIVvsAtg~~ 82 (140)
T cd05212 3 CTPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVHDADVVVVGSPKP 82 (140)
T ss_pred CCCcccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHH
Q 024306 191 NLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 191 ~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~ 262 (269)
++++.+|+++|++|+|++.++.. ++++.++++++|||||||||+|++|||+|+++++
T Consensus 83 ~~i~~~~ikpGa~Vidvg~~~~~---------------~~~~~~~a~~~tPvpgGVGp~T~a~L~~n~~~~~ 139 (140)
T cd05212 83 EKVPTEWIKPGATVINCSPTKLS---------------GDDVKESASLYVPMTGGVGKLTVAMRMQNMVRSV 139 (140)
T ss_pred CccCHHHcCCCCEEEEcCCCccc---------------chhhHhhceEEcCCCCCchHHHHHHHHHHHHHhc
Confidence 89999999999999999987621 2466788999999999999999999999999875
No 41
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=100.00 E-value=3.3e-34 Score=260.77 Aligned_cols=223 Identities=17% Similarity=0.166 Sum_probs=182.1
Q ss_pred EEeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCC---CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcC
Q 024306 14 ILVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADG---CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAV 89 (269)
Q Consensus 14 i~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~---~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i 89 (269)
-.+| +|.+||.++.+++ +|+++|+++.|..|+.+ +++++|.+.++.++. .++.|+|||+|||+.+ .++++.+
T Consensus 9 ~liG-~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~-~~~~G~nVTiP~K~~v--~~~~D~~ 84 (284)
T PRK12549 9 GLIG-AGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAER-MGFAGLNITHPCKQAV--IPHLDEL 84 (284)
T ss_pred EEEC-CCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHh-cCCCEEEECcCCHHHH--HHHhccC
Confidence 3567 7999999999888 99999999999999753 347899999999987 5899999999999855 8888999
Q ss_pred Cc-ccccccc-ccce-ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEE
Q 024306 90 SL-EKDVDGF-HPLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSI 165 (269)
Q Consensus 90 ~p-~kdvdg~-~~~n-~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti 165 (269)
++ .+.+.++ |.++ .|++. |+ ++|..|+++.|++...++++|+|+|+|+||+ |++++..|...|+ +|++
T Consensus 85 ~~~A~~iGAvNTv~~~~g~l~-G~------NTD~~G~~~~l~~~~~~~~~k~vlIlGaGGa-araia~aL~~~G~~~I~I 156 (284)
T PRK12549 85 SDDARALGAVNTVVFRDGRRI-GH------NTDWSGFAESFRRGLPDASLERVVQLGAGGA-GAAVAHALLTLGVERLTI 156 (284)
T ss_pred CHHHHHhCCceEEEecCCEEE-EE------cCCHHHHHHHHHhhccCccCCEEEEECCcHH-HHHHHHHHHHcCCCEEEE
Confidence 88 6665544 2222 34444 55 4567999999998777899999999999998 9999999999997 6999
Q ss_pred EeCCCC----------------------CHhhhcCCCCEEEeccCC---C--C-cccCCCcCCCcEEEEeeecCCCCCCC
Q 024306 166 VHALTK----------------------NPEQITSEADIVIAAAGV---A--N-LVRGSWLKPGAVVLDVGTCPVDDPSC 217 (269)
Q Consensus 166 ~~~~t~----------------------~l~~~~~~aDiVIsAtg~---p--~-~i~~~~~~~g~vViDv~~~~~~~~~~ 217 (269)
++|+.. ++.+.++++|+||+||+. + . +++.++++++.+|+|+.|+|.+|
T Consensus 157 ~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T--- 233 (284)
T PRK12549 157 FDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLET--- 233 (284)
T ss_pred ECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCC---
Confidence 998631 122356789999999862 2 2 36677899999999999999988
Q ss_pred CCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 218 EYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 218 ~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
+|+ ..+++.|+ ++.+|.+ ||++|++.+||+|+|.
T Consensus 234 ----~ll------~~A~~~G~--~~~~G~~-----ML~~Qa~~~f~~wtg~ 267 (284)
T PRK12549 234 ----ELL------RAARALGC--RTLDGGG-----MAVFQAVDAFELFTGR 267 (284)
T ss_pred ----HHH------HHHHHCCC--eEecCHH-----HHHHHHHHHHHHhcCC
Confidence 688 44788898 4577885 9999999999999995
No 42
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=100.00 E-value=8e-34 Score=258.65 Aligned_cols=218 Identities=21% Similarity=0.223 Sum_probs=178.9
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
++| +|.+||.++.+++ +|+++|+++.|..|+. ++++|.+.++.++. .++.|+|||+|||+.+ .++++.+++ .
T Consensus 12 liG-~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~l~~-~~~~G~nVTiP~K~~~--~~~~D~l~~~A 85 (288)
T PRK12749 12 LMA-YPIRHSLSPEMQNKALEKAGLPFTYMAFEV--DNDSFPGAIEGLKA-LKMRGTGVSMPNKQLA--CEYVDELTPAA 85 (288)
T ss_pred EEC-CCcccccCHHHHHHHHHHcCCCeEEEEEec--CHHHHHHHHHHHHh-cCCCEEEECcCCHHHH--HHHhccCCHHH
Confidence 557 7999999999888 9999999999999965 57899999999987 4899999999999855 888899988 6
Q ss_pred cccccccccee-----cccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEE
Q 024306 93 KDVDGFHPLNI-----GNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIV 166 (269)
Q Consensus 93 kdvdg~~~~n~-----g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~ 166 (269)
+.+.+ +|+ |++. |+ ++|..|+++.|++.+.++++|+++|+|+||+ +|+++..|+.+|+ +|+|+
T Consensus 86 ~~iGA---VNTv~~~~g~l~-G~------NTD~~Gf~~~l~~~~~~~~~k~vlvlGaGGa-arAi~~~l~~~g~~~i~i~ 154 (288)
T PRK12749 86 KLVGA---INTIVNDDGYLR-GY------NTDGTGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLF 154 (288)
T ss_pred HHhCc---eeEEEccCCEEE-EE------ecCHHHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEE
Confidence 66554 553 4443 54 5577999999999999999999999999999 9999999999997 69999
Q ss_pred eCCCC------CH-----------------------hhhcCCCCEEEeccCC---CC----c-ccCCCcCCCcEEEEeee
Q 024306 167 HALTK------NP-----------------------EQITSEADIVIAAAGV---AN----L-VRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 167 ~~~t~------~l-----------------------~~~~~~aDiVIsAtg~---p~----~-i~~~~~~~g~vViDv~~ 209 (269)
+|+.. ++ .+.+.++|+|||+|+. |+ + ++.+.++++.+|+|+.|
T Consensus 155 nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY 234 (288)
T PRK12749 155 NRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY 234 (288)
T ss_pred eCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecC
Confidence 99731 00 1134568999999973 32 2 24456788999999999
Q ss_pred cCCCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 210 CPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 210 ~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
+|.+| +|+ ..+++.|+ ++.+|.+ ||++|++++||+|+|.+
T Consensus 235 ~P~~T-------~ll------~~A~~~G~--~~~~Gl~-----ML~~Qa~~~f~lwtg~~ 274 (288)
T PRK12749 235 NPHMT-------KLL------QQAQQAGC--KTIDGYG-----MLLWQGAEQFTLWTGKD 274 (288)
T ss_pred CCccC-------HHH------HHHHHCCC--eEECCHH-----HHHHHHHHHHHHhcCCC
Confidence 99988 788 44788898 4477785 99999999999999963
No 43
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-33 Score=255.97 Aligned_cols=220 Identities=22% Similarity=0.277 Sum_probs=179.5
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+||.++.+++ +|+++|+++.|..|+. ++++|.+.++.++. .++.|+|||+|||+.+ .++++.++| .
T Consensus 14 liG-~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVT~P~K~~v--~~~ld~~~~~A 87 (289)
T PRK12548 14 LIG-SPVGHSGSPAMYNYSFQKAGLDYAYLAFDI--PVDKVPDAIKAIKT-FNMRGANVTMPCKSEA--AKYMDELSPAA 87 (289)
T ss_pred EEc-CCcccccCHHHHHHHHHHcCCCEEEEEEec--CHHHHHHHHHHHHH-CCCCEEEECccCHHHH--HHHhhcCCHHH
Confidence 557 7999999999988 9999999999999965 57899999999987 5899999999999855 888999988 5
Q ss_pred cccccc-ccce-ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCC
Q 024306 93 KDVDGF-HPLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHAL 169 (269)
Q Consensus 93 kdvdg~-~~~n-~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~-Vti~~~~ 169 (269)
+.+.++ |.++ .|++. |+| +|..|+++.|++++.++++|+++|+|+||+ |++++..|+..|++ |++++|+
T Consensus 88 ~~iGavNTi~~~~g~l~-G~N------TD~~G~~~~l~~~~~~~~~k~vlI~GAGGa-grAia~~La~~G~~~V~I~~R~ 159 (289)
T PRK12548 88 RIIGAVNTIVNDDGKLT-GHI------TDGLGFVRNLREHGVDVKGKKLTVIGAGGA-ATAIQVQCALDGAKEITIFNIK 159 (289)
T ss_pred HHhCceeEEEeECCEEE-EEe------cCHHHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence 555443 1222 34554 554 466999999998888899999999999998 99999999999985 9999986
Q ss_pred C---CC---------------------------HhhhcCCCCEEEeccCC---CC----cc-cCCCcCCCcEEEEeeecC
Q 024306 170 T---KN---------------------------PEQITSEADIVIAAAGV---AN----LV-RGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 170 t---~~---------------------------l~~~~~~aDiVIsAtg~---p~----~i-~~~~~~~g~vViDv~~~~ 211 (269)
. .. +.+.+..+|+||++|+. |+ ++ +.++++++.+|+|+.|+|
T Consensus 160 ~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P 239 (289)
T PRK12548 160 DDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNP 239 (289)
T ss_pred chHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCC
Confidence 3 10 11233567999999972 32 24 456788999999999999
Q ss_pred CCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 212 VDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 212 ~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
.+| +|+ ..+++.|+ ++.+|++ ||++|++++||+|+|.
T Consensus 240 ~~T-------~ll------~~A~~~G~--~~~~G~~-----ML~~Qa~~~f~lwtg~ 276 (289)
T PRK12548 240 KKT-------KLL------EDAEAAGC--KTVGGLG-----MLLWQGAEAYKLYTGK 276 (289)
T ss_pred CCC-------HHH------HHHHHCCC--eeeCcHH-----HHHHHHHHHHHHhcCC
Confidence 988 788 45888898 5688885 9999999999999996
No 44
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-33 Score=257.04 Aligned_cols=223 Identities=17% Similarity=0.182 Sum_probs=179.9
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCC---CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCC
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADG---CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVS 90 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~---~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~ 90 (269)
.+| +|.+||.++.+++ +|+++|+++.|..|+.. +++++|.+.++.++. .++.|+|||+|||+.+ .++++.++
T Consensus 9 liG-~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~-~~~~G~nVT~P~K~~~--~~~lD~l~ 84 (283)
T PRK14027 9 LIG-QGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALY-LGFNGLNITHPYKQAV--LPLLDEVS 84 (283)
T ss_pred EEC-CCccccCCHHHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHh-cCCCEEEECccCHHHH--HHHhhhCC
Confidence 456 7999999999988 89999999999999754 346889999999988 5899999999999854 88999999
Q ss_pred c-cccccccc-cce--ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEE
Q 024306 91 L-EKDVDGFH-PLN--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSI 165 (269)
Q Consensus 91 p-~kdvdg~~-~~n--~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti 165 (269)
| .+.+.+++ .++ .|++. |+|| |..|+++.|++...++++|+++|+|+||+ ||+++..|.+.|+ +|+|
T Consensus 85 ~~A~~iGAVNTv~~~~~g~l~-G~NT------D~~Gf~~~L~~~~~~~~~k~vlilGaGGa-arAi~~aL~~~g~~~i~i 156 (283)
T PRK14027 85 EQATQLGAVNTVVIDATGHTT-GHNT------DVSGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQV 156 (283)
T ss_pred HHHHHhCCceEEEECCCCcEE-EEcC------CHHHHHHHHHhcCcCcCCCeEEEECCcHH-HHHHHHHHHHCCCCEEEE
Confidence 9 66665542 222 34444 5544 66999999987666789999999999998 9999999999997 6999
Q ss_pred EeCCCC---CH---------------------hhhcCCCCEEEeccCC---CC---cccCCCcCCCcEEEEeeecCCCCC
Q 024306 166 VHALTK---NP---------------------EQITSEADIVIAAAGV---AN---LVRGSWLKPGAVVLDVGTCPVDDP 215 (269)
Q Consensus 166 ~~~~t~---~l---------------------~~~~~~aDiVIsAtg~---p~---~i~~~~~~~g~vViDv~~~~~~~~ 215 (269)
++|+.. .+ .+.+..+|+|||+|+. ++ +++.+.++++.+|+|+.|+|.+|
T Consensus 157 ~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P~~T- 235 (283)
T PRK14027 157 ADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIET- 235 (283)
T ss_pred EcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCCCCCCCCCCCCCHHHcCCCcEEEEcccCCCCC-
Confidence 998631 11 1234568999999973 22 35566788899999999999988
Q ss_pred CCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 216 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 216 ~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
+|+ ..+++.|+ ++-+|.+ ||++|++++||+|+|.+
T Consensus 236 ------~ll------~~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lw~G~~ 270 (283)
T PRK14027 236 ------ELL------KAARALGC--ETLDGTR-----MAIHQAVDAFRLFTGLE 270 (283)
T ss_pred ------HHH------HHHHHCCC--EEEccHH-----HHHHHHHHHHHHHhCCC
Confidence 788 44888898 4577885 99999999999999963
No 45
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-33 Score=255.65 Aligned_cols=220 Identities=21% Similarity=0.323 Sum_probs=180.1
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+||.++.+++ +|+++|+++.|..|.. .+++|.++++.+.+ +++.|+|||+|||+.+ .+++|.+++ +
T Consensus 11 viG-~Pi~HS~SP~~Hn~~~~~lGl~~~Y~a~~v--~~~~l~~~v~~~~~-~g~~G~NVTiP~Ke~~--~~~lD~l~~~A 84 (283)
T COG0169 11 VIG-NPISHSLSPRMHNAAFRALGLDYVYLAFEV--PPEDLPEAVSGIRA-LGFRGLNVTIPFKEAA--LPLLDELSPRA 84 (283)
T ss_pred EEc-CCcccCcCHHHHHHHHHHcCCCceEEEeec--CHHHHHHHHHHHHh-cCCCeeEECCccHHHH--HHHHhcCCHHH
Confidence 345 8899999999888 9999999999999966 58999999999996 7999999999999955 889999999 5
Q ss_pred cccccc-cccee--cccccCCCCCccccCCHHHHHHHHHHhC--CCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEE
Q 024306 93 KDVDGF-HPLNI--GNLAMRGREPLFIPCTPKGCIELLIRSG--VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIV 166 (269)
Q Consensus 93 kdvdg~-~~~n~--g~l~~g~~~~~~~p~t~~g~~~~l~~~~--~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~ 166 (269)
+.+.++ |.++. |++. |||| |+.|+++.|++++ .+.+|++|+|+|+||+ +|+++..|++.|+ +|+|+
T Consensus 85 ~~iGAVNTl~~~~~g~l~-G~NT------D~~G~~~~L~~~~~~~~~~~~~vlilGAGGA-arAv~~aL~~~g~~~i~V~ 156 (283)
T COG0169 85 RLIGAVNTLVREDDGKLR-GYNT------DGIGFLRALKEFGLPVDVTGKRVLILGAGGA-ARAVAFALAEAGAKRITVV 156 (283)
T ss_pred HHhCCceEEEEccCCEEE-EEcC------CHHHHHHHHHhcCCCcccCCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEE
Confidence 555444 33333 5555 6655 6699999999987 5667999999999999 9999999999996 79999
Q ss_pred eCCCCC---Hh------------------hhcCCCCEEEeccCC---CC----cccCCCcCCCcEEEEeeecCCCCCCCC
Q 024306 167 HALTKN---PE------------------QITSEADIVIAAAGV---AN----LVRGSWLKPGAVVLDVGTCPVDDPSCE 218 (269)
Q Consensus 167 ~~~t~~---l~------------------~~~~~aDiVIsAtg~---p~----~i~~~~~~~g~vViDv~~~~~~~~~~~ 218 (269)
||+... +. +...++|+|||||+. ++ +++.+.++++.+|+|+.|+|.+|
T Consensus 157 NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T---- 232 (283)
T COG0169 157 NRTRERAEELADLFGELGAAVEAAALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLET---- 232 (283)
T ss_pred eCCHHHHHHHHHHhhhcccccccccccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCC----
Confidence 997411 10 111158999999983 22 35567899999999999999999
Q ss_pred CCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 219 YGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 219 ~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
+|+ +.+++.|+.| ..|.| ||++|++++|++|+|.
T Consensus 233 ---plL------~~A~~~G~~~--idGl~-----Mlv~Qaa~aF~lwtg~ 266 (283)
T COG0169 233 ---PLL------REARAQGAKT--IDGLG-----MLVHQAAEAFELWTGV 266 (283)
T ss_pred ---HHH------HHHHHcCCeE--ECcHH-----HHHHHHHHHHHHHhCC
Confidence 688 4478888763 66775 9999999999999986
No 46
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=100.00 E-value=5.1e-33 Score=252.75 Aligned_cols=223 Identities=16% Similarity=0.202 Sum_probs=176.9
Q ss_pred EEEEeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCC
Q 024306 12 AVILVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVS 90 (269)
Q Consensus 12 ~~i~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~ 90 (269)
..-.+| +|.+||.++.+++ +|+++|+++.|..|+.. ++++|.+.++.+.. ++.|+|||+|||+.+ .++++.++
T Consensus 7 ~~~liG-~Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~-~~~~l~~~~~~~~~--~~~G~nVT~P~K~~~--~~~~d~~~ 80 (282)
T TIGR01809 7 KAFIIG-KPIAHSRSPHLHNAGYEILGLPDKTYEFETC-SAEELKEVLSGFGP--QFGGASVTIPLKFAI--LRFADEHT 80 (282)
T ss_pred EEEEEc-CCchhccCHHHHHHHHHHcCCCcEEEeeecC-CHHHHHHHHHhcCC--CCcEEEECCCCHHHH--HHHhhcCC
Confidence 345678 7999999999999 99999999999999753 36889999999843 799999999999855 88899999
Q ss_pred c-ccccccc-ccce--ecccccCCCCCccccCCHHHHHHHHHHhCC--CCccceEEEEcCCcccHHHHHHHHHhCCC-EE
Q 024306 91 L-EKDVDGF-HPLN--IGNLAMRGREPLFIPCTPKGCIELLIRSGV--EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TV 163 (269)
Q Consensus 91 p-~kdvdg~-~~~n--~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~--~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~V 163 (269)
+ .+.+.++ |.++ .|++. |+ ++|..|+++.|++.+. +++||+|+|||+||+ ||+++..|.+.|+ +|
T Consensus 81 ~~A~~iGAVNTv~~~~~g~l~-G~------NTD~~G~~~~l~~~~~~~~~~~k~vlvlGaGGa-arai~~aL~~~G~~~i 152 (282)
T TIGR01809 81 DRASLIGSVNTLLRTQNGIWK-GD------NTDWDGIAGALANIGKFEPLAGFRGLVIGAGGT-SRAAVYALASLGVTDI 152 (282)
T ss_pred HHHHHhCceeEEEEcCCCcEE-Ee------cCCHHHHHHHHHhhCCccccCCceEEEEcCcHH-HHHHHHHHHHcCCCeE
Confidence 8 6555544 2222 23443 55 4567999999998773 689999999999998 9999999999997 69
Q ss_pred EEEeCCCC----------------------CHhhhcCCCCEEEeccCCCCcccCCC------------cCCCcEEEEeee
Q 024306 164 SIVHALTK----------------------NPEQITSEADIVIAAAGVANLVRGSW------------LKPGAVVLDVGT 209 (269)
Q Consensus 164 ti~~~~t~----------------------~l~~~~~~aDiVIsAtg~p~~i~~~~------------~~~g~vViDv~~ 209 (269)
+|++|+.. ++...+.++|+|||+|+...+++.+. ++++.+|+|+.|
T Consensus 153 ~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY 232 (282)
T TIGR01809 153 TVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAY 232 (282)
T ss_pred EEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEee
Confidence 99998621 11233567899999999644333322 346789999999
Q ss_pred cCCCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 210 CPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 210 ~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
+|.+| +|+ ..++++|+ ++.+|.+ ||++|++.+|+.|+|.
T Consensus 233 ~P~~T-------~ll------~~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~ 271 (282)
T TIGR01809 233 DPWPT-------PLV------AIVSAAGW--RVISGLQ-----MLLHQGFAQFEQWTGM 271 (282)
T ss_pred CCCCC-------HHH------HHHHHCCC--EEECcHH-----HHHHHHHHHHHHHHCC
Confidence 99988 688 45788888 4577885 9999999999999986
No 47
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=100.00 E-value=6.8e-33 Score=250.56 Aligned_cols=230 Identities=17% Similarity=0.196 Sum_probs=179.3
Q ss_pred CCCCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCC
Q 024306 1 MKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHL 80 (269)
Q Consensus 1 ~~~~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~ 80 (269)
|....+..++|..=++| +|.|+|-+ .++.+|+++|+++.|..|+ +++|.+.++.++. .++.|+|||+|||+.+
T Consensus 1 ~~~~~~~~~~~~~gliG-~P~~~Sp~-ihn~~f~~~gl~~~Y~~~~----~~~l~~~~~~l~~-~~~~G~nVT~P~K~~~ 73 (272)
T PRK12550 1 MTNMINKDTQLCISLAA-RPSNFGTR-FHNYLYEALGLNFLYKAFT----TTDLTAAIGGVRA-LGIRGCAVSMPFKEAV 73 (272)
T ss_pred CCCcCCCCceEEEEEEc-cchhcCHH-HHHHHHHHcCCCcEEEecC----HhHHHHHHHHHHh-cCCCEEEECcCCHHHH
Confidence 45566667787666778 55665555 5555999999999999995 4689999999987 5899999999999855
Q ss_pred CHHHHHhcCCc-ccccccc-ccce-ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHH
Q 024306 81 DEGKILDAVSL-EKDVDGF-HPLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 157 (269)
Q Consensus 81 ~~~~i~~~i~p-~kdvdg~-~~~n-~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~ 157 (269)
.++++.++| .+.+.++ |.++ .|++. |+ ++|..|+++.|++.+.+ .+++++|+|+||+ +|+++..|.
T Consensus 74 --~~~lD~l~~~A~~iGAVNTi~~~~g~l~-G~------NTD~~Gf~~~L~~~~~~-~~~~vlilGaGGa-arAi~~aL~ 142 (272)
T PRK12550 74 --IPLVDELDPSAQAIESVNTIVNTDGHLK-AY------NTDYIAIAKLLASYQVP-PDLVVALRGSGGM-AKAVAAALR 142 (272)
T ss_pred --HHHhhcCCHHHHHhCCeeEEEeeCCEEE-EE------ecCHHHHHHHHHhcCCC-CCCeEEEECCcHH-HHHHHHHHH
Confidence 889999999 5555543 2222 33443 54 55779999999988775 4679999999999 999999999
Q ss_pred hCCC-EEEEEeCCCCC---Hh--------hhc--CCCCEEEeccCC---CC------cccCCCcCCCcEEEEeeecCCCC
Q 024306 158 RHHA-TVSIVHALTKN---PE--------QIT--SEADIVIAAAGV---AN------LVRGSWLKPGAVVLDVGTCPVDD 214 (269)
Q Consensus 158 ~~ga-~Vti~~~~t~~---l~--------~~~--~~aDiVIsAtg~---p~------~i~~~~~~~g~vViDv~~~~~~~ 214 (269)
+.|+ +|+|++|+.+. +. +.+ ..+|+|||||+. ++ .++.++++++.+|+|+.|+|.+|
T Consensus 143 ~~g~~~i~i~nR~~~~a~~la~~~~~~~~~~~~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T 222 (272)
T PRK12550 143 DAGFTDGTIVARNEKTGKALAELYGYEWRPDLGGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAET 222 (272)
T ss_pred HCCCCEEEEEeCCHHHHHHHHHHhCCcchhhcccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccC
Confidence 9997 59999997421 11 111 458999999972 21 36677899999999999999988
Q ss_pred CCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 215 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 215 ~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
+|+ ..+++.|+ ++.+|.+ ||++|++++||+|+|.
T Consensus 223 -------~ll------~~A~~~G~--~~i~Gl~-----MLi~Qa~~~f~lwtg~ 256 (272)
T PRK12550 223 -------PLI------RYARARGK--TVITGAE-----VIALQAVEQFVLYTGV 256 (272)
T ss_pred -------HHH------HHHHHCcC--eEeCCHH-----HHHHHHHHHHHHHhCC
Confidence 688 44788898 4578885 9999999999999996
No 48
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=100.00 E-value=1.5e-32 Score=249.12 Aligned_cols=220 Identities=17% Similarity=0.260 Sum_probs=180.1
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+||.++.+++ +|+++|+++.|..|+. ++++|.+.++.++. .++.|+|||+|||+.+ .++++.++| .
T Consensus 10 viG-~pi~hS~SP~~hn~~~~~~gl~~~y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVT~P~K~~~--~~~~d~~~~~A 83 (278)
T PRK00258 10 VIG-NPIAHSKSPLIHNAAFKQLGLDGVYLAILV--PPEDLEDAVKGFFA-LGGRGANVTVPFKEAA--FALADELSERA 83 (278)
T ss_pred EEC-CchhcccCHHHHHHHHHHcCCCcEEEEEec--CHHHHHHHHHHHHh-CCCCEEEECcCCHHHH--HHHhhcCCHHH
Confidence 457 8999999999888 9999999999999965 57899999999988 4899999999999855 889999999 6
Q ss_pred ccccccc-cce-ecccccCCCCCccccCCHHHHHHHHHH-hCCCCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeC
Q 024306 93 KDVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHA 168 (269)
Q Consensus 93 kdvdg~~-~~n-~g~l~~g~~~~~~~p~t~~g~~~~l~~-~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~ 168 (269)
+.+.+++ .++ .|++. |+ ++|+.|+++.|++ .+.++++|+|+|+|+||+ |+++++.|..+| ++|++++|
T Consensus 84 ~~igavNtv~~~~g~l~-G~------NTD~~G~~~~l~~~~~~~~~~k~vlVlGaGg~-a~ai~~aL~~~g~~~V~v~~R 155 (278)
T PRK00258 84 RLIGAVNTLVLEDGRLI-GD------NTDGIGFVRALEERLGVDLKGKRILILGAGGA-ARAVILPLLDLGVAEITIVNR 155 (278)
T ss_pred HHhCCceEEEeeCCEEE-EE------cccHHHHHHHHHhccCCCCCCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEEeC
Confidence 6655442 222 33443 54 4577999999986 577899999999999997 999999999999 68999998
Q ss_pred CCCC-------------------HhhhcCCCCEEEeccCCC---C----cccCCCcCCCcEEEEeeecCCCCCCCCCCce
Q 024306 169 LTKN-------------------PEQITSEADIVIAAAGVA---N----LVRGSWLKPGAVVLDVGTCPVDDPSCEYGYR 222 (269)
Q Consensus 169 ~t~~-------------------l~~~~~~aDiVIsAtg~p---~----~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~ 222 (269)
+... +.+.+.++|+|||+|+.. + .++.++++++.+|+|+.|+|.+| +
T Consensus 156 ~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T-------~ 228 (278)
T PRK00258 156 TVERAEELAKLFGALGKAELDLELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPT-------P 228 (278)
T ss_pred CHHHHHHHHHHhhhccceeecccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCC-------H
Confidence 7321 123457799999999842 1 35567789999999999999888 6
Q ss_pred eecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 223 LMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 223 l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
|+ ..+++.|+ ++.+|.+ ||++|++.+|++|+|.
T Consensus 229 ll------~~A~~~G~--~~~~G~~-----Ml~~Qa~~~f~~wtg~ 261 (278)
T PRK00258 229 FL------AWAKAQGA--RTIDGLG-----MLVHQAAEAFELWTGV 261 (278)
T ss_pred HH------HHHHHCcC--eecCCHH-----HHHHHHHHHHHHHcCC
Confidence 77 44888898 5678885 9999999999999995
No 49
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=99.97 E-value=2.3e-31 Score=240.29 Aligned_cols=220 Identities=19% Similarity=0.201 Sum_probs=177.2
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+||.++.+++ +|+++|+++.|..|+. ++++|.+.++.++. .++.|+|||+|||+.+ .++++.+++ .
T Consensus 5 viG-~pi~hS~SP~~hn~~~~~~g~~~~y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVT~P~K~~~--~~~~d~~~~~A 78 (270)
T TIGR00507 5 VIG-NPIAHSKSPLIHNAFFKQLGLEGPYIAFLV--PPDDLEDALSGFFA-LGFKGANVTSPFKEEA--FQFLDEIDERA 78 (270)
T ss_pred EEC-CccccccCHHHHHHHHHHcCCCcEEEEEec--CHHHHHHHHHHHHh-cCCCEEEECcCCHHHH--HHHhhhCCHHH
Confidence 345 7999999999888 9999999999999965 57899999999988 4899999999999844 889999999 5
Q ss_pred ccccccc-cce-ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 93 KDVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 93 kdvdg~~-~~n-~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+.+.+++ .++ .|++. |+ ++|..|+++.|++.+...++|+++|+|+|++ |++++..|.+.|++|++++|+.
T Consensus 79 ~~~gavNti~~~~g~l~-g~------NTD~~G~~~~l~~~~~~~~~k~vliiGaGg~-g~aia~~L~~~g~~v~v~~R~~ 150 (270)
T TIGR00507 79 KLAGAVNTLKLEDGKLV-GY------NTDGIGLVSDLERLIPLRPNQRVLIIGAGGA-ARAVALPLLKADCNVIIANRTV 150 (270)
T ss_pred HHhCCceEEEeeCCEEE-EE------cCCHHHHHHHHHhcCCCccCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCH
Confidence 6655442 112 33443 54 5577999999998777778999999999987 9999999999999999998863
Q ss_pred CCH------------------h-hhcCCCCEEEeccCC---CC----cccCCCcCCCcEEEEeeecCCCCCCCCCCceee
Q 024306 171 KNP------------------E-QITSEADIVIAAAGV---AN----LVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLM 224 (269)
Q Consensus 171 ~~l------------------~-~~~~~aDiVIsAtg~---p~----~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~ 224 (269)
... . ....++|+||++|+. +. .++.++++++.+|+|+.|+|.+| +|+
T Consensus 151 ~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-------~ll 223 (270)
T TIGR00507 151 SKAEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-------PFL 223 (270)
T ss_pred HHHHHHHHHHhhcCceEEechhhhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-------HHH
Confidence 211 1 122578999999984 22 24456789999999999999877 566
Q ss_pred cccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 225 GDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 225 GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
..+++.|+ ++.+|.+ ||++|++.+||+|+|.
T Consensus 224 ------~~A~~~G~--~~vdG~~-----Ml~~Qa~~~f~~w~g~ 254 (270)
T TIGR00507 224 ------AEAKSLGT--KTIDGLG-----MLVAQAALAFELWTGV 254 (270)
T ss_pred ------HHHHHCCC--eeeCCHH-----HHHHHHHHHHHHHcCC
Confidence 44788887 4577885 9999999999999985
No 50
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=99.96 E-value=1.7e-29 Score=247.36 Aligned_cols=219 Identities=20% Similarity=0.263 Sum_probs=175.8
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+||.++.+++ +|+++|+++.|..|+. ++|.+.++.++. +++.|+|||+|||+.+ .++++.++| +
T Consensus 257 liG-~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v----~~l~~~~~~l~~-~~~~G~nVTiP~K~~v--~~~lD~~~~~A 328 (529)
T PLN02520 257 IIG-KPVGHSKSPILHNEAFKSVGFNGVYVHLLV----DDLAKFLQTYSS-PDFAGFSCTIPHKEDA--LKCCDEVDPIA 328 (529)
T ss_pred EEc-CCcccccCHHHHHHHHHHCCCCcEEEEeeh----hhHHHHHHHHhh-CCCCEEEECcCCHHHH--HHHhccCCHHH
Confidence 567 7999999999888 9999999999999965 468888888877 6899999999999855 889999999 6
Q ss_pred ccccccc-cce---ecccccCCCCCccccCCHHHHHHHHHHh----------CCCCccceEEEEcCCcccHHHHHHHHHh
Q 024306 93 KDVDGFH-PLN---IGNLAMRGREPLFIPCTPKGCIELLIRS----------GVEIMGKNAVVIGRSNIVGLPTSLLLQR 158 (269)
Q Consensus 93 kdvdg~~-~~n---~g~l~~g~~~~~~~p~t~~g~~~~l~~~----------~~~l~gk~v~ViG~gg~vg~~~a~~L~~ 158 (269)
+.+.+++ .++ .|++. |+| +|..|+++.|++. +.++++|+++|+|+||+ |+++++.|++
T Consensus 329 ~~iGAVNTvv~~~~~g~l~-G~N------TD~~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlIlGaGGa-grAia~~L~~ 400 (529)
T PLN02520 329 KSIGAINTIIRRPSDGKLV-GYN------TDYIGAISAIEDGLRASGSSPASGSPLAGKLFVVIGAGGA-GKALAYGAKE 400 (529)
T ss_pred HHhCCceEEEEeCCCCEEE-EEc------ccHHHHHHHHHhhhcccccccccccCCCCCEEEEECCcHH-HHHHHHHHHH
Confidence 6665542 222 24444 554 4679999999752 45789999999999998 9999999999
Q ss_pred CCCEEEEEeCCCCC---H--------------hh-hcCCCCEEEeccCC---CC----cccCCCcCCCcEEEEeeecCCC
Q 024306 159 HHATVSIVHALTKN---P--------------EQ-ITSEADIVIAAAGV---AN----LVRGSWLKPGAVVLDVGTCPVD 213 (269)
Q Consensus 159 ~ga~Vti~~~~t~~---l--------------~~-~~~~aDiVIsAtg~---p~----~i~~~~~~~g~vViDv~~~~~~ 213 (269)
+|++|++++|+.+. + .+ ....+|+||++|+. |+ +++.+++++..+|+|+.|+|.+
T Consensus 401 ~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~~ 480 (529)
T PLN02520 401 KGARVVIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPKI 480 (529)
T ss_pred CCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCCc
Confidence 99999999886321 1 11 11357899988872 32 3666788999999999999998
Q ss_pred CCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 214 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 214 ~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
| +|+ ..++++|+ ++.+|. .||++|++.+|++|+|.+
T Consensus 481 T-------~ll------~~A~~~G~--~~~~Gl-----~MLv~Qa~~~f~lwtg~~ 516 (529)
T PLN02520 481 T-------RLL------REAEESGA--IIVSGT-----EMFIRQAYEQFERFTGLP 516 (529)
T ss_pred C-------HHH------HHHHHCCC--eEeCcH-----HHHHHHHHHHHHHHhCCC
Confidence 8 688 44788898 457788 499999999999999963
No 51
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=99.96 E-value=2.3e-28 Score=236.84 Aligned_cols=217 Identities=15% Similarity=0.180 Sum_probs=174.4
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+||.++.+++ +|+++|+++.|..|+. +++++.+.++.++. +++.|+|||+|||+.+ .++++.++| +
T Consensus 220 liG-~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVT~P~K~~v--~~~~d~~~~~A 293 (477)
T PRK09310 220 LIG-DPVDRSISHLSHNPLFSQLSLNCPYIKLPL--TPQELPKFFSTIRD-LPFLGLSVTMPLKTAV--LDFLDKLDPSV 293 (477)
T ss_pred EEC-CCcccccCHHHHHHHHHHcCCCcEEEEeec--CHHHHHHHHHHHHh-CCCCEEEECccCHHHH--HHHhccCCHHH
Confidence 556 7999999999888 9999999999999965 57889999999987 5899999999999854 888999999 6
Q ss_pred ccccccc-cce-ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 93 KDVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 93 kdvdg~~-~~n-~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+.+.+++ .++ .|++. |+| +|..|+++.|++.+.++++++++|+|+|++ |++++..|.+.|++|++++|+.
T Consensus 294 ~~iGAVNTv~~~~g~l~-G~N------TD~~G~~~~l~~~~~~~~~k~vlIiGaGgi-G~aia~~L~~~G~~V~i~~R~~ 365 (477)
T PRK09310 294 KLCGSCNTLVFRNGKIE-GYN------TDGEGLFSLLKQKNIPLNNQHVAIVGAGGA-AKAIATTLARAGAELLIFNRTK 365 (477)
T ss_pred HHhCcceEEEeeCCEEE-EEe------cCHHHHHHHHHhcCCCcCCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCH
Confidence 6655542 222 34554 554 466999999999999999999999999987 9999999999999999998863
Q ss_pred CCH--------------h--hhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhh
Q 024306 171 KNP--------------E--QITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMR 234 (269)
Q Consensus 171 ~~l--------------~--~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~ 234 (269)
... . ..+.++|+||++|+..-.+.. .+. .+|+|+.|+|.+| .|+ ..++
T Consensus 366 ~~~~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g~~~~~-~l~--~~v~D~~Y~P~~T-------~ll------~~A~ 429 (477)
T PRK09310 366 AHAEALASRCQGKAFPLESLPELHRIDIIINCLPPSVTIPK-AFP--PCVVDINTLPKHS-------PYT------QYAR 429 (477)
T ss_pred HHHHHHHHHhccceechhHhcccCCCCEEEEcCCCCCcchh-HHh--hhEEeccCCCCCC-------HHH------HHHH
Confidence 211 1 114678999999985333432 333 3899999999888 566 4477
Q ss_pred HcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 235 LASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 235 ~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
+.|+ ++.+|.+ ||++|++.+|++|+|.
T Consensus 430 ~~G~--~~~~G~~-----Ml~~Qa~~~f~lw~g~ 456 (477)
T PRK09310 430 SQGS--SIIYGYE-----MFAEQALLQFRLWFPT 456 (477)
T ss_pred HCcC--EEECcHH-----HHHHHHHHHHHHHcCC
Confidence 8888 4577885 9999999999999996
No 52
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=99.93 E-value=4.2e-26 Score=181.86 Aligned_cols=91 Identities=51% Similarity=0.820 Sum_probs=80.2
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i 85 (269)
|++|+|++|++|+||+|.+|++++.++|+++||+++.+.||++++++++.+.|++||+|++||||+||+|||+|+++.++
T Consensus 27 ~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~D~~V~GIlvq~PLP~~i~~~~i 106 (117)
T PF00763_consen 27 GITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELIEKLNEDPSVHGILVQLPLPKHIDERKI 106 (117)
T ss_dssp T---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHHHHHHH-TT-SEEEEESSSSTTSHHHHH
T ss_pred CCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCccHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcccccc
Q 024306 86 LDAVSLEKDVD 96 (269)
Q Consensus 86 ~~~i~p~kdvd 96 (269)
+++|+|.||||
T Consensus 107 ~~~I~p~KDVD 117 (117)
T PF00763_consen 107 LEAIDPEKDVD 117 (117)
T ss_dssp HHTS-GGGBTT
T ss_pred HhccCcccCCC
Confidence 99999999997
No 53
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=99.61 E-value=2.5e-15 Score=137.68 Aligned_cols=130 Identities=22% Similarity=0.362 Sum_probs=104.1
Q ss_pred CHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------------CHhhhcCCCC
Q 024306 119 TPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------NPEQITSEAD 181 (269)
Q Consensus 119 t~~g-~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------------~l~~~~~~aD 181 (269)
++++ +...+++++.++.|++|+|+|+|++ |++++..|..+|++|++++|+.. ++.+.++++|
T Consensus 134 ~aegav~~a~~~~~~~l~g~kvlViG~G~i-G~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aD 212 (296)
T PRK08306 134 TAEGAIMMAIEHTPITIHGSNVLVLGFGRT-GMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKID 212 (296)
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCC
Confidence 4455 5566777889999999999999996 99999999999999999998742 3456789999
Q ss_pred EEEeccCCCCcccCCC---cCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhH---cceecccCCcccHHHHHHHH
Q 024306 182 IVIAAAGVANLVRGSW---LKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVAMLL 255 (269)
Q Consensus 182 iVIsAtg~p~~i~~~~---~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~---~~~~tpvpgGvGp~T~~mLl 255 (269)
+||++++.+ .++.++ ++++.+|||++++| |++||+.+.+. ..+.++.||+|+|+|.+.|+
T Consensus 213 iVI~t~p~~-~i~~~~l~~~~~g~vIIDla~~p-------------ggtd~~~a~~~Gv~~~~~~~lpg~vap~ta~~~~ 278 (296)
T PRK08306 213 IIFNTIPAL-VLTKEVLSKMPPEALIIDLASKP-------------GGTDFEYAEKRGIKALLAPGLPGKVAPKTAGQIL 278 (296)
T ss_pred EEEECCChh-hhhHHHHHcCCCCcEEEEEccCC-------------CCcCeeehhhCCeEEEEECCCCccCCHHHHHHHH
Confidence 999998643 455554 68899999999987 55676443332 44458889999999999999
Q ss_pred HHHHHHHH
Q 024306 256 SNTLDSAK 263 (269)
Q Consensus 256 ~n~v~a~~ 263 (269)
.|.+..+-
T Consensus 279 ~~~i~~~l 286 (296)
T PRK08306 279 ANVLSQLL 286 (296)
T ss_pred HHHHHHHH
Confidence 99987764
No 54
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=99.57 E-value=1.4e-14 Score=132.23 Aligned_cols=129 Identities=26% Similarity=0.373 Sum_probs=102.2
Q ss_pred CCHHHHH-HHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------------CHhhhcCCC
Q 024306 118 CTPKGCI-ELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------NPEQITSEA 180 (269)
Q Consensus 118 ~t~~g~~-~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------------~l~~~~~~a 180 (269)
+|+++++ ..++..+++++|++++|+|.|++ |+++++.|...|++|++++|+.. ++.+.++++
T Consensus 132 ~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~i-G~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~a 210 (287)
T TIGR02853 132 PTAEGAIMMAIEHTDFTIHGSNVMVLGFGRT-GMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEI 210 (287)
T ss_pred hHHHHHHHHHHHhcCCCCCCCEEEEEcChHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccC
Confidence 4666655 45566778999999999999996 99999999999999999988642 245678899
Q ss_pred CEEEeccCCCCcccCC---CcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceec---c-cCCcccHHHHHH
Q 024306 181 DIVIAAAGVANLVRGS---WLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVIT---P-VPGGVGPMTVAM 253 (269)
Q Consensus 181 DiVIsAtg~p~~i~~~---~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~t---p-vpgGvGp~T~~m 253 (269)
|+||++++.+ .++.+ .+++++++||++|+| |.+|| +.+++.|..+ | .||.|+|.|.+.
T Consensus 211 DiVint~P~~-ii~~~~l~~~k~~aliIDlas~P-------------g~tdf-~~Ak~~G~~a~~~~glPg~~ap~ta~~ 275 (287)
T TIGR02853 211 DIVINTIPAL-VLTADVLSKLPKHAVIIDLASKP-------------GGTDF-EYAKKRGIKALLAPGLPGIVAPKTAGK 275 (287)
T ss_pred CEEEECCChH-HhCHHHHhcCCCCeEEEEeCcCC-------------CCCCH-HHHHHCCCEEEEeCCCCcccCchhHHH
Confidence 9999999753 34433 468899999999987 66677 4466655332 3 799999999999
Q ss_pred HHHHHHHHH
Q 024306 254 LLSNTLDSA 262 (269)
Q Consensus 254 Ll~n~v~a~ 262 (269)
++.|++...
T Consensus 276 i~~~~~~~~ 284 (287)
T TIGR02853 276 ILANVLSEL 284 (287)
T ss_pred HHHHHHHHH
Confidence 999998654
No 55
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=99.51 E-value=2.6e-13 Score=111.72 Aligned_cols=129 Identities=26% Similarity=0.390 Sum_probs=100.2
Q ss_pred CCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCCC-------------------CHhhhc
Q 024306 118 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK-------------------NPEQIT 177 (269)
Q Consensus 118 ~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t~-------------------~l~~~~ 177 (269)
+|..|+.+.+++.+.++++++++|+|.|++ |++++..|.+.| ..|++++++.. +..+.+
T Consensus 1 td~~g~~~a~~~~~~~~~~~~i~iiG~G~~-g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (155)
T cd01065 1 TDGLGFVRALEEAGIELKGKKVLILGAGGA-ARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELL 79 (155)
T ss_pred CCHHHHHHHHHhhCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhcc
Confidence 367999999999999999999999999886 999999999986 67999977521 223346
Q ss_pred CCCCEEEeccCCCC------cccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHH
Q 024306 178 SEADIVIAAAGVAN------LVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTV 251 (269)
Q Consensus 178 ~~aDiVIsAtg~p~------~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~ 251 (269)
+++|+||++++.+. .+....++++.+|+|+++.|..+ .+. ..+++.+. .+.+|.
T Consensus 80 ~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~-------~l~------~~~~~~g~--~~v~g~----- 139 (155)
T cd01065 80 AEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLET-------PLL------KEARALGA--KTIDGL----- 139 (155)
T ss_pred ccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCC-------HHH------HHHHHCCC--ceeCCH-----
Confidence 88999999998532 13334568899999999987543 344 44556665 345555
Q ss_pred HHHHHHHHHHHHHHhC
Q 024306 252 AMLLSNTLDSAKRAYG 267 (269)
Q Consensus 252 ~mLl~n~v~a~~~~~~ 267 (269)
.||++|++++|+.|+|
T Consensus 140 ~~~~~q~~~~~~~~~~ 155 (155)
T cd01065 140 EMLVYQAAEAFELWTG 155 (155)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 6999999999999997
No 56
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=99.40 E-value=2.1e-13 Score=111.04 Aligned_cols=88 Identities=26% Similarity=0.300 Sum_probs=70.0
Q ss_pred HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCC--------------------CCHhhhcCCCCEEEe
Q 024306 127 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT--------------------KNPEQITSEADIVIA 185 (269)
Q Consensus 127 l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~-Vti~~~~t--------------------~~l~~~~~~aDiVIs 185 (269)
.++...++++++++|||+||+ |+++++.|..+|++ |++++|+. .++.+.+.++|+||+
T Consensus 3 a~~~~~~l~~~~vlviGaGg~-ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~ 81 (135)
T PF01488_consen 3 AKKKFGDLKGKRVLVIGAGGA-ARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVIN 81 (135)
T ss_dssp HCTHHSTGTTSEEEEESSSHH-HHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE
T ss_pred hHHhcCCcCCCEEEEECCHHH-HHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEE
Confidence 344445899999999999998 99999999999986 99999972 234466789999999
Q ss_pred ccCCCCc-ccCCCcCCC----cEEEEeeecCCCCC
Q 024306 186 AAGVANL-VRGSWLKPG----AVVLDVGTCPVDDP 215 (269)
Q Consensus 186 Atg~p~~-i~~~~~~~g----~vViDv~~~~~~~~ 215 (269)
||+.+.. ++++++++. .+++|++++|..+|
T Consensus 82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr~i~~ 116 (135)
T PF01488_consen 82 ATPSGMPIITEEMLKKASKKLRLVIDLAVPRDIDP 116 (135)
T ss_dssp -SSTTSTSSTHHHHTTTCHHCSEEEES-SS-SB-T
T ss_pred ecCCCCcccCHHHHHHHHhhhhceeccccCCCCCh
Confidence 9998765 888888886 49999998876553
No 57
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=99.26 E-value=8.5e-12 Score=118.32 Aligned_cols=165 Identities=15% Similarity=0.171 Sum_probs=117.2
Q ss_pred HHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EE
Q 024306 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TV 163 (269)
Q Consensus 85 i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~V 163 (269)
+.++++-.|.+..-|..+.|.+- -+++++++.++...++++|+++|||+|.+ |..+|+.|..+|. .|
T Consensus 138 FqkAi~~gKrvRseT~I~~~~VS-----------i~saAv~lA~~~~~~L~~~~vlvIGAGem-~~lva~~L~~~g~~~i 205 (414)
T COG0373 138 FQKAISVGKRVRSETGIGKGAVS-----------ISSAAVELAKRIFGSLKDKKVLVIGAGEM-GELVAKHLAEKGVKKI 205 (414)
T ss_pred HHHHHHHHHHhhcccCCCCCccc-----------hHHHHHHHHHHHhcccccCeEEEEcccHH-HHHHHHHHHhCCCCEE
Confidence 44477778888777777766553 34889999999888899999999999998 9999999999995 69
Q ss_pred EEEeCCC-----------------CCHhhhcCCCCEEEeccCCCCc-ccCCCcCC------CcEEEEeeecCCCCCCC--
Q 024306 164 SIVHALT-----------------KNPEQITSEADIVIAAAGVANL-VRGSWLKP------GAVVLDVGTCPVDDPSC-- 217 (269)
Q Consensus 164 ti~~~~t-----------------~~l~~~~~~aDiVIsAtg~p~~-i~~~~~~~------g~vViDv~~~~~~~~~~-- 217 (269)
+|+||+- .++.+++.++|+||++||+|++ ++.+++.. ..++||++.||+.+|..
T Consensus 206 ~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdie~~v~~ 285 (414)
T COG0373 206 TIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDVEPEVGE 285 (414)
T ss_pred EEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCCCccccC
Confidence 9999982 3567899999999999999998 68887644 25899999999876532
Q ss_pred CCCceeecccch-HHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHh
Q 024306 218 EYGYRLMGDVCY-EEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 218 ~~~~~l~GDvd~-~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
.++ -.+=|+|. +.+.+....-. --.--....++..-+..|..|+
T Consensus 286 l~~-v~l~~iDDL~~iv~~n~~~R----~~~~~~ae~iIeee~~~~~~~l 330 (414)
T COG0373 286 LPN-VFLYTIDDLEEIVEENLEAR----KEEAAKAEAIIEEELAEFMEWL 330 (414)
T ss_pred cCC-eEEEehhhHHHHHHHhHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 011 23335542 12211110000 0000124577777777777775
No 58
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=99.18 E-value=6.3e-11 Score=104.68 Aligned_cols=93 Identities=22% Similarity=0.321 Sum_probs=77.9
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE---EEEEeCC----CC--------------------
Q 024306 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT---VSIVHAL----TK-------------------- 171 (269)
Q Consensus 119 t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~---Vti~~~~----t~-------------------- 171 (269)
+..|++..++..+.++++++++|+|+|++ |++++.+|...|++ |++++|+ ..
T Consensus 8 ~lAG~~~al~~~g~~l~~~rvlvlGAGgA-g~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~ 86 (226)
T cd05311 8 TLAGLLNALKLVGKKIEEVKIVINGAGAA-GIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK 86 (226)
T ss_pred HHHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc
Confidence 45788999999999999999999999998 99999999999974 9999987 11
Q ss_pred ---CHhhhcCCCCEEEeccCCCCcccCCCcC---CCcEEEEeeecCCCC
Q 024306 172 ---NPEQITSEADIVIAAAGVANLVRGSWLK---PGAVVLDVGTCPVDD 214 (269)
Q Consensus 172 ---~l~~~~~~aDiVIsAtg~p~~i~~~~~~---~g~vViDv~~~~~~~ 214 (269)
++.+.++++|+||++|+ ++.+++++++ ++.+|+|+. ||.+|
T Consensus 87 ~~~~l~~~l~~~dvlIgaT~-~G~~~~~~l~~m~~~~ivf~ls-nP~~e 133 (226)
T cd05311 87 TGGTLKEALKGADVFIGVSR-PGVVKKEMIKKMAKDPIVFALA-NPVPE 133 (226)
T ss_pred ccCCHHHHHhcCCEEEeCCC-CCCCCHHHHHhhCCCCEEEEeC-CCCCc
Confidence 23355677899999999 7778877776 788999977 88765
No 59
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=99.16 E-value=1.1e-10 Score=111.60 Aligned_cols=143 Identities=17% Similarity=0.131 Sum_probs=100.5
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC------------------CCHhhhcCC
Q 024306 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT------------------KNPEQITSE 179 (269)
Q Consensus 119 t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t------------------~~l~~~~~~ 179 (269)
-+.+++++.++...+++|++|+|||+|++ |+.++..|..+|+ ++++++|+. .++.+.+.+
T Consensus 164 v~~~Av~la~~~~~~l~~kkvlviGaG~~-a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~ 242 (414)
T PRK13940 164 VAFSAITLAKRQLDNISSKNVLIIGAGQT-GELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKK 242 (414)
T ss_pred HHHHHHHHHHHHhcCccCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhcc
Confidence 34677899988777899999999999998 9999999999996 699999872 123567889
Q ss_pred CCEEEeccCCCCc-ccCCCcCC-CcEEEEeeecCCCCCCCC--CCceeecccch-HHHhhHcceecccCCcccHHHHHHH
Q 024306 180 ADIVIAAAGVANL-VRGSWLKP-GAVVLDVGTCPVDDPSCE--YGYRLMGDVCY-EEAMRLASVITPVPGGVGPMTVAML 254 (269)
Q Consensus 180 aDiVIsAtg~p~~-i~~~~~~~-g~vViDv~~~~~~~~~~~--~~~~l~GDvd~-~~~~~~~~~~tpvpgGvGp~T~~mL 254 (269)
||+||+||+.|++ ++.++++. ..++||++.+++.+|.-. .|-.++ |+|. +.+.++.....- --...+..+
T Consensus 243 aDiVI~aT~a~~~vi~~~~~~~~~~~~iDLavPRdidp~v~~l~~v~l~-~iDdl~~i~~~n~~~R~----~~~~~a~~i 317 (414)
T PRK13940 243 ADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQALDPKLGELEQNVYY-CVDDINAVIEDNKDKRK----YESSKAQKI 317 (414)
T ss_pred CCEEEECcCCCCeeECHHHhCCCCeEEEEeCCCCCCCccccCcCCeEEE-eHHHHHHHHHHHHHHHH----HHHHHHHHH
Confidence 9999999999998 78777653 468999999998876421 222333 5542 122221100000 000124577
Q ss_pred HHHHHHHHHHHhC
Q 024306 255 LSNTLDSAKRAYG 267 (269)
Q Consensus 255 l~n~v~a~~~~~~ 267 (269)
+.+-+..|..|+.
T Consensus 318 I~e~~~~f~~w~~ 330 (414)
T PRK13940 318 IVKSLEEYLEKEK 330 (414)
T ss_pred HHHHHHHHHHHHH
Confidence 7778888888863
No 60
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=99.16 E-value=1.2e-10 Score=87.48 Aligned_cols=78 Identities=29% Similarity=0.460 Sum_probs=67.0
Q ss_pred CCHHHHHHHHHHhC----CCCccceEEEEcCCcccHHHHHHHHHhC-CCEEEEEeCCCCCHhhhcCCCCEEEeccCCCCc
Q 024306 118 CTPKGCIELLIRSG----VEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTKNPEQITSEADIVIAAAGVANL 192 (269)
Q Consensus 118 ~t~~g~~~~l~~~~----~~l~gk~v~ViG~gg~vg~~~a~~L~~~-ga~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~ 192 (269)
||+.++++.|++.. .++++++++|+|+|.+ |++++.+|.+. +.+|++++| |++|++++.+++
T Consensus 1 ~t~~~~~~~l~~~~~~~~~~~~~~~v~i~G~G~~-g~~~a~~l~~~~~~~v~v~~r------------di~i~~~~~~~~ 67 (86)
T cd05191 1 ATAAGAVALLKAAGKVTNKSLKGKTVVVLGAGEV-GKGIAKLLADEGGKKVVLCDR------------DILVTATPAGVP 67 (86)
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCCEEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC------------CEEEEcCCCCCC
Confidence 57888888887654 4589999999999886 99999999998 467999976 999999999998
Q ss_pred ccC---CCcCCCcEEEEee
Q 024306 193 VRG---SWLKPGAVVLDVG 208 (269)
Q Consensus 193 i~~---~~~~~g~vViDv~ 208 (269)
+.+ .+++++.+|+|++
T Consensus 68 ~~~~~~~~~~~~~~v~~~a 86 (86)
T cd05191 68 VLEEATAKINEGAVVIDLA 86 (86)
T ss_pred chHHHHHhcCCCCEEEecC
Confidence 766 6788999999974
No 61
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=99.10 E-value=7.7e-10 Score=94.96 Aligned_cols=96 Identities=30% Similarity=0.311 Sum_probs=72.3
Q ss_pred CHHHHHHHHH----HhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------
Q 024306 119 TPKGCIELLI----RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------------- 171 (269)
Q Consensus 119 t~~g~~~~l~----~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------------------- 171 (269)
|+.+.++.++ +++.++++++++|+|+.|.+|+.++..|.++|++|++++|+..
T Consensus 7 ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~ 86 (194)
T cd01078 7 TAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETS 86 (194)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCC
Confidence 5566555554 4567999999999997444599999999999999999987521
Q ss_pred ---CHhhhcCCCCEEEeccCCCC--cccC-CCcCCCcEEEEeeecCCCC
Q 024306 172 ---NPEQITSEADIVIAAAGVAN--LVRG-SWLKPGAVVLDVGTCPVDD 214 (269)
Q Consensus 172 ---~l~~~~~~aDiVIsAtg~p~--~i~~-~~~~~g~vViDv~~~~~~~ 214 (269)
++.+.++++|+||++|+.+. .... ...+++.+++|+.|+|..+
T Consensus 87 ~~~~~~~~~~~~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~~~~ 135 (194)
T cd01078 87 DDAARAAAIKGADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVPPVG 135 (194)
T ss_pred CHHHHHHHHhcCCEEEECCCCCceechhhhcccCceeEEEEccCCCCCC
Confidence 11356788999999998765 3222 2345688999999999766
No 62
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=99.06 E-value=3.9e-10 Score=94.36 Aligned_cols=91 Identities=24% Similarity=0.416 Sum_probs=65.7
Q ss_pred HHHHHHHH-HhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEec
Q 024306 121 KGCIELLI-RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAA 186 (269)
Q Consensus 121 ~g~~~~l~-~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsA 186 (269)
+..++.+. ..+..+.||+++|+|.|.. ||.+|+.|..+|+.|+|+.... ..+.+.++++|++|+|
T Consensus 7 ~S~~d~i~r~t~~~l~Gk~vvV~GYG~v-G~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vta 85 (162)
T PF00670_consen 7 QSLVDGIMRATNLMLAGKRVVVIGYGKV-GKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTA 85 (162)
T ss_dssp HHHHHHHHHHH-S--TTSEEEEE--SHH-HHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-
T ss_pred hhHHHHHHhcCceeeCCCEEEEeCCCcc-cHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEEC
Confidence 44444444 5688899999999999996 9999999999999999997652 3577889999999999
Q ss_pred cCCCCcccCCC---cCCCcEEEEeeecCC
Q 024306 187 AGVANLVRGSW---LKPGAVVLDVGTCPV 212 (269)
Q Consensus 187 tg~p~~i~~~~---~~~g~vViDv~~~~~ 212 (269)
||..+.++.++ +|+|+++.+++....
T Consensus 86 TG~~~vi~~e~~~~mkdgail~n~Gh~d~ 114 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDGAILANAGHFDV 114 (162)
T ss_dssp SSSSSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred CCCccccCHHHHHHhcCCeEEeccCcCce
Confidence 99988887665 689999999997653
No 63
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.99 E-value=4.2e-09 Score=98.19 Aligned_cols=90 Identities=21% Similarity=0.249 Sum_probs=74.1
Q ss_pred HHHhCCCCccceEEEEcCCcccHHHHHHHHHhC-CC-EEEEEeCCCC---------------CHhhhcCCCCEEEeccCC
Q 024306 127 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH-HA-TVSIVHALTK---------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 127 l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~-ga-~Vti~~~~t~---------------~l~~~~~~aDiVIsAtg~ 189 (269)
.+..+.++++|+|+|+|++|.+|+.+++.|..+ |+ ++++++|+.. ++.+.+.++|+||++++.
T Consensus 146 ~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~ 225 (340)
T PRK14982 146 APRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASM 225 (340)
T ss_pred HHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcC
Confidence 345667899999999999888899999999754 54 7999988631 223677899999999998
Q ss_pred CCc--ccCCCcCCCcEEEEeeecCCCCCC
Q 024306 190 ANL--VRGSWLKPGAVVLDVGTCPVDDPS 216 (269)
Q Consensus 190 p~~--i~~~~~~~g~vViDv~~~~~~~~~ 216 (269)
|+. ++++++++++++||++++++.+|.
T Consensus 226 ~~~~~I~~~~l~~~~~viDiAvPRDVd~~ 254 (340)
T PRK14982 226 PKGVEIDPETLKKPCLMIDGGYPKNLDTK 254 (340)
T ss_pred CcCCcCCHHHhCCCeEEEEecCCCCCCcc
Confidence 664 788999999999999999987653
No 64
>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []. Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....
Probab=98.95 E-value=6e-10 Score=83.41 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=59.4
Q ss_pred CcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccc
Q 024306 19 RRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 97 (269)
Q Consensus 19 ~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg 97 (269)
+|.+||.++..++ +|+++|+++.|..|+.+ ++++.+.++.+++ +++.|++||+|||+.+ .++++.+++ .+..
T Consensus 4 ~pi~hS~SP~~hn~~f~~~g~~~~Y~~~~v~--~~~l~~~~~~~~~-~~~~G~~VT~P~K~~~--~~~~D~~~~--~A~~ 76 (83)
T PF08501_consen 4 NPISHSLSPLIHNAAFEALGLDAVYIPFEVE--PEDLEDFLDALRA-PNFRGLNVTMPHKEAA--IPYLDELSP--SAKA 76 (83)
T ss_dssp SSSTT-SHHHHHHHHHHHTTSSEEEEEEETS--TTCHHHHHHHHHH-TTESEEEE-TTSTTHH--GGGSSEE-H--HHHH
T ss_pred CCcccccCHHHHHHHHHHcCCCcEEEEeecC--HHHHHHHHHHHhc-CCCCeeeecchHHHHH--HHHhccCCH--HHHH
Confidence 7899999999888 99999999999999764 6789999999998 7999999999999733 555555555 3333
Q ss_pred ccccee
Q 024306 98 FHPLNI 103 (269)
Q Consensus 98 ~~~~n~ 103 (269)
++++|+
T Consensus 77 igAvNt 82 (83)
T PF08501_consen 77 IGAVNT 82 (83)
T ss_dssp HTS-SE
T ss_pred hCCccc
Confidence 345664
No 65
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.91 E-value=2.5e-09 Score=103.26 Aligned_cols=111 Identities=21% Similarity=0.235 Sum_probs=82.3
Q ss_pred HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCCCCcc
Q 024306 127 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLV 193 (269)
Q Consensus 127 l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~p~~i 193 (269)
++..+..+.||+++|+|.|.+ |+++|+.|..+|++|+++++.. .++.+.++.||+||+++|.++++
T Consensus 245 ~R~~~~~LaGKtVgVIG~G~I-Gr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~iI 323 (476)
T PTZ00075 245 FRATDVMIAGKTVVVCGYGDV-GKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKDII 323 (476)
T ss_pred HHhcCCCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCccccc
Confidence 344578899999999999985 9999999999999999996652 24667889999999999998889
Q ss_pred cCCCc---CCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceec
Q 024306 194 RGSWL---KPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVIT 240 (269)
Q Consensus 194 ~~~~~---~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~t 240 (269)
+.++| ++|++++++|....+.... .-+..+|+|...+.+....+|
T Consensus 324 ~~e~~~~MKpGAiLINvGr~d~Ei~i~--aL~~~~~vdv~evep~v~~~~ 371 (476)
T PTZ00075 324 TLEHMRRMKNNAIVGNIGHFDNEIQVA--ELEAYPGIEIVEIKPQVDRYT 371 (476)
T ss_pred CHHHHhccCCCcEEEEcCCCchHHhHH--HHHhcCCceeecccCCCCeEE
Confidence 87765 8999999999874221000 002235666555455444444
No 66
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=98.88 E-value=7.7e-09 Score=96.23 Aligned_cols=94 Identities=15% Similarity=0.074 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCCC-----CHh----hhcCCCCEEEec---
Q 024306 120 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-----NPE----QITSEADIVIAA--- 186 (269)
Q Consensus 120 ~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t~-----~l~----~~~~~aDiVIsA--- 186 (269)
+.+++++.+.. .++++|+|+|||+|.+ |+.+++.|..+|+ .|+++||+.. ++. ++..++||||++
T Consensus 159 ~s~av~~~~~~-~~l~~k~vLvIGaGem-~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVIs~t~~ 236 (338)
T PRK00676 159 ESVVQQELRRR-QKSKKASLLFIGYSEI-NRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVIFFGSSE 236 (338)
T ss_pred HHHHHHHHHHh-CCccCCEEEEEcccHH-HHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEEEEcCCc
Confidence 34466777664 6799999999999998 9999999999995 6999999831 222 456799999997
Q ss_pred cCCCCc-ccCCCcCC--CcEEEEeeecCCCCC
Q 024306 187 AGVANL-VRGSWLKP--GAVVLDVGTCPVDDP 215 (269)
Q Consensus 187 tg~p~~-i~~~~~~~--g~vViDv~~~~~~~~ 215 (269)
|+.|++ ++.+++++ ..++||++.+++.+|
T Consensus 237 Tas~~p~i~~~~~~~~~~r~~iDLAvPRdId~ 268 (338)
T PRK00676 237 SAYAFPHLSWESLADIPDRIVFDFNVPRTFPW 268 (338)
T ss_pred CCCCCceeeHHHHhhccCcEEEEecCCCCCcc
Confidence 667887 66666643 248999999998775
No 67
>PLN00203 glutamyl-tRNA reductase
Probab=98.78 E-value=1.9e-08 Score=98.81 Aligned_cols=143 Identities=12% Similarity=0.093 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHhCC--CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------CCHhh
Q 024306 119 TPKGCIELLIRSGV--EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------KNPEQ 175 (269)
Q Consensus 119 t~~g~~~~l~~~~~--~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t--------------------~~l~~ 175 (269)
-+.+++++.++... ++.+++|+|||+|++ |+.++..|..+|+ .|++++|+. .++.+
T Consensus 247 v~s~Av~la~~~~~~~~l~~kkVlVIGAG~m-G~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~ 325 (519)
T PLN00203 247 VSSAAVELALMKLPESSHASARVLVIGAGKM-GKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLA 325 (519)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeCHHH-HHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHH
Confidence 34577888876644 489999999999997 9999999999997 699998862 12345
Q ss_pred hcCCCCEEEeccCCCCc-ccCCCcCC----------CcEEEEeeecCCCCCCCC--CCceeecccch-HHHhhHcceecc
Q 024306 176 ITSEADIVIAAAGVANL-VRGSWLKP----------GAVVLDVGTCPVDDPSCE--YGYRLMGDVCY-EEAMRLASVITP 241 (269)
Q Consensus 176 ~~~~aDiVIsAtg~p~~-i~~~~~~~----------g~vViDv~~~~~~~~~~~--~~~~l~GDvd~-~~~~~~~~~~tp 241 (269)
.+.++|+||++|+.+++ ++.+++++ ..++||++.+++.+|.-. .+-.++ |+|. +.+.++.....-
T Consensus 326 al~~aDVVIsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdIdp~v~~l~~v~ly-diDdL~~i~~~n~~~R~ 404 (519)
T PLN00203 326 CAAEADVVFTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPRNVGACVSELESARVY-NVDDLKEVVAANKEDRL 404 (519)
T ss_pred HHhcCCEEEEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCCCccccccCCCCeEE-EeccHHHHHHHhHHHHH
Confidence 67899999999998876 78877643 258999999998775311 122232 5552 222221110000
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHhC
Q 024306 242 VPGGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 242 vpgGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
---.-+.-++..-+..|+.|+.
T Consensus 405 ----~~~~~Ae~II~ee~~~F~~w~~ 426 (519)
T PLN00203 405 ----RKAMEAQTIIREESKNFEAWRD 426 (519)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHH
Confidence 0001145677777888888864
No 68
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.71 E-value=3.8e-08 Score=94.56 Aligned_cols=96 Identities=19% Similarity=0.294 Sum_probs=75.2
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCCC-----------------CHhhhcCCC
Q 024306 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-----------------NPEQITSEA 180 (269)
Q Consensus 119 t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t~-----------------~l~~~~~~a 180 (269)
.+..++++.+....++.|++|+|+|+|.+ |+.++..|...|+ .|++++++.. ++.+.+.++
T Consensus 165 v~~~Av~~a~~~~~~~~~~~vlViGaG~i-G~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~a 243 (423)
T PRK00045 165 VASAAVELAKQIFGDLSGKKVLVIGAGEM-GELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEA 243 (423)
T ss_pred HHHHHHHHHHHhhCCccCCEEEEECchHH-HHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccC
Confidence 33455666655444789999999999987 9999999999997 7999988621 233457889
Q ss_pred CEEEeccCCCCc-ccCCCcCC--------CcEEEEeeecCCCCC
Q 024306 181 DIVIAAAGVANL-VRGSWLKP--------GAVVLDVGTCPVDDP 215 (269)
Q Consensus 181 DiVIsAtg~p~~-i~~~~~~~--------g~vViDv~~~~~~~~ 215 (269)
|+||+|||.|++ ++.+|+++ +.+++|++.++..+|
T Consensus 244 DvVI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~Prdid~ 287 (423)
T PRK00045 244 DIVISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAVPRDIEP 287 (423)
T ss_pred CEEEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCCCCCCcc
Confidence 999999998876 78888743 479999998887665
No 69
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.66 E-value=4.6e-08 Score=93.86 Aligned_cols=142 Identities=20% Similarity=0.211 Sum_probs=93.8
Q ss_pred HHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCCC-----------------CHhhhcCCCC
Q 024306 120 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK-----------------NPEQITSEAD 181 (269)
Q Consensus 120 ~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t~-----------------~l~~~~~~aD 181 (269)
+.+++++.++...+++|++|+|+|+|.+ |+.++..|...| ..|++++|+.. ++.+.+.++|
T Consensus 164 ~~~Av~la~~~~~~l~~~~VlViGaG~i-G~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aD 242 (417)
T TIGR01035 164 SSAAVELAERIFGSLKGKKALLIGAGEM-GELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEAD 242 (417)
T ss_pred HHHHHHHHHHHhCCccCCEEEEECChHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCC
Confidence 4566777776656799999999999887 999999999999 57999988631 2345678999
Q ss_pred EEEeccCCCCc-ccCCCcCC-------CcEEEEeeecCCCCCCC--CCCceeecccc-hHHHhhHcceecccCCcccHHH
Q 024306 182 IVIAAAGVANL-VRGSWLKP-------GAVVLDVGTCPVDDPSC--EYGYRLMGDVC-YEEAMRLASVITPVPGGVGPMT 250 (269)
Q Consensus 182 iVIsAtg~p~~-i~~~~~~~-------g~vViDv~~~~~~~~~~--~~~~~l~GDvd-~~~~~~~~~~~tpvpgGvGp~T 250 (269)
+||++||.|++ ++.+++++ ..+++|++.++..+|.- ..+..++ |+| .+.+.++.....- ----.
T Consensus 243 vVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~Prdid~~v~~l~~v~l~-~vDdl~~~~~~n~~~r~----~~~~~ 317 (417)
T TIGR01035 243 IVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVPRDVDPAVARLEGVFLY-DVDDLQPVVEENLAERR----EEAEK 317 (417)
T ss_pred EEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCCCCCChhhcCcCCeEEE-EHHHHHHHHHHhHHHHH----HHHHH
Confidence 99999998876 78887743 35999999887766532 1121222 333 1222221111000 00012
Q ss_pred HHHHHHHHHHHHHHHhC
Q 024306 251 VAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 251 ~~mLl~n~v~a~~~~~~ 267 (269)
+.-++.+-+..|..|+.
T Consensus 318 a~~ii~~~~~~f~~w~~ 334 (417)
T TIGR01035 318 AEEIVEEETAEFKQWLR 334 (417)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45677777788888864
No 70
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.60 E-value=1.5e-07 Score=90.28 Aligned_cols=92 Identities=24% Similarity=0.338 Sum_probs=77.0
Q ss_pred CHHHHHHHHHHh-CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEE
Q 024306 119 TPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVI 184 (269)
Q Consensus 119 t~~g~~~~l~~~-~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVI 184 (269)
|..+++..+++. +..+.|++|+|+|.|.+ |+.++..|...|++|+++++.. .++.+.++.+|+||
T Consensus 194 t~~s~~~ai~rat~~~l~Gk~VlViG~G~I-G~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDVVI 272 (425)
T PRK05476 194 TGESLLDGIKRATNVLIAGKVVVVAGYGDV-GKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDIFV 272 (425)
T ss_pred HHhhhHHHHHHhccCCCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCEEE
Confidence 678888777665 77889999999999986 9999999999999999997653 13567788999999
Q ss_pred eccCCCCcccCC---CcCCCcEEEEeeecC
Q 024306 185 AAAGVANLVRGS---WLKPGAVVLDVGTCP 211 (269)
Q Consensus 185 sAtg~p~~i~~~---~~~~g~vViDv~~~~ 211 (269)
++||.++.++.+ .+++|++++.+|...
T Consensus 273 ~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 273 TATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred ECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 999988877654 468999999999754
No 71
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.51 E-value=4.3e-07 Score=86.69 Aligned_cols=93 Identities=28% Similarity=0.389 Sum_probs=75.2
Q ss_pred CHHHHHHHHHH-hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEE
Q 024306 119 TPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVI 184 (269)
Q Consensus 119 t~~g~~~~l~~-~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVI 184 (269)
|...+++.+.+ .++.+.|++|+|+|.|.+ |+.+++.|...|++|+++.+.. .++.+.++.+|+||
T Consensus 177 ~g~s~~~~i~r~t~~~l~Gk~VvViG~G~I-G~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVVI 255 (406)
T TIGR00936 177 TGQSTIDGILRATNLLIAGKTVVVAGYGWC-GKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIFI 255 (406)
T ss_pred cchhHHHHHHHhcCCCCCcCEEEEECCCHH-HHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEEE
Confidence 56666665554 477899999999999996 9999999999999999986542 13466788999999
Q ss_pred eccCCCCcccC---CCcCCCcEEEEeeecCC
Q 024306 185 AAAGVANLVRG---SWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 185 sAtg~p~~i~~---~~~~~g~vViDv~~~~~ 212 (269)
++||.++.++. ..+++|++++.+|....
T Consensus 256 taTG~~~vI~~~~~~~mK~GailiN~G~~~~ 286 (406)
T TIGR00936 256 TATGNKDVIRGEHFENMKDGAIVANIGHFDV 286 (406)
T ss_pred ECCCCHHHHHHHHHhcCCCCcEEEEECCCCc
Confidence 99998887766 35689999999987543
No 72
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.50 E-value=3.5e-07 Score=84.48 Aligned_cols=95 Identities=21% Similarity=0.295 Sum_probs=71.0
Q ss_pred HHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCCC-----------------CHhhhcCCCC
Q 024306 120 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-----------------NPEQITSEAD 181 (269)
Q Consensus 120 ~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t~-----------------~l~~~~~~aD 181 (269)
+..+++..+....++.|++|+|+|+|.+ |+.++..|...|+ .|++++|+.. ++.+.+.++|
T Consensus 162 ~~~Av~~a~~~~~~l~~~~V~ViGaG~i-G~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aD 240 (311)
T cd05213 162 SSAAVELAEKIFGNLKGKKVLVIGAGEM-GELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEAD 240 (311)
T ss_pred HHHHHHHHHHHhCCccCCEEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCC
Confidence 3445777776555689999999999887 9999999998775 6999988631 2345678899
Q ss_pred EEEeccCCCCc---ccC---CCcCCCcEEEEeeecCCCCC
Q 024306 182 IVIAAAGVANL---VRG---SWLKPGAVVLDVGTCPVDDP 215 (269)
Q Consensus 182 iVIsAtg~p~~---i~~---~~~~~g~vViDv~~~~~~~~ 215 (269)
+||++||.|++ +.. ....++.+++|++.++..+|
T Consensus 241 vVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPrdi~~ 280 (311)
T cd05213 241 VVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPRDIEP 280 (311)
T ss_pred EEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCCCCch
Confidence 99999998765 211 12235789999998776554
No 73
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=98.50 E-value=3.3e-07 Score=85.07 Aligned_cols=90 Identities=24% Similarity=0.384 Sum_probs=73.4
Q ss_pred CHHHHHHHHH-HhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEE
Q 024306 119 TPKGCIELLI-RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVI 184 (269)
Q Consensus 119 t~~g~~~~l~-~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVI 184 (269)
|....+.-+. ..++-+.||+++|.|.|.+ ||.+|+.|...||+|.|..-.. ..+.++.+.+||+|
T Consensus 191 tgqS~~DgI~RaTn~liaGK~vVV~GYG~v-GrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifi 269 (420)
T COG0499 191 TGQSLLDGILRATNVLLAGKNVVVAGYGWV-GRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFV 269 (420)
T ss_pred cchhHHHHHHhhhceeecCceEEEeccccc-chHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEE
Confidence 4555555444 3678899999999999996 9999999999999999886442 23567889999999
Q ss_pred eccCCCCcccCCCc---CCCcEEEEeee
Q 024306 185 AAAGVANLVRGSWL---KPGAVVLDVGT 209 (269)
Q Consensus 185 sAtg~p~~i~~~~~---~~g~vViDv~~ 209 (269)
|+||.-+.++.+++ |+|+++..+|.
T Consensus 270 T~TGnkdVi~~eh~~~MkDgaIl~N~GH 297 (420)
T COG0499 270 TATGNKDVIRKEHFEKMKDGAILANAGH 297 (420)
T ss_pred EccCCcCccCHHHHHhccCCeEEecccc
Confidence 99999888887764 78999988883
No 74
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=98.48 E-value=4.6e-07 Score=81.25 Aligned_cols=149 Identities=19% Similarity=0.264 Sum_probs=98.4
Q ss_pred CcCEEEEeCCCCC-------CCCHHHHHhcCCcccc----cccc---ccc--eecccccCC-------CCCccccCCHHH
Q 024306 66 SINGILVQLPLPQ-------HLDEGKILDAVSLEKD----VDGF---HPL--NIGNLAMRG-------REPLFIPCTPKG 122 (269)
Q Consensus 66 ~v~Gi~V~~Pl~~-------~~~~~~i~~~i~p~kd----vdg~---~~~--n~g~l~~g~-------~~~~~~p~t~~g 122 (269)
-+.|+++..||-. +...++++++....++ |-|+ +++ |.|.-..-. +-..+-.-|+++
T Consensus 70 vieg~l~~~pllpe~~~s~pkaatrrvl~a~~~a~~~Ga~V~gLGgFssIVgn~~~n~q~~~~e~t~~~~ttgns~Taya 149 (351)
T COG5322 70 VIEGYLVESPLLPEMLRSRPKAATRRVLNAMALAQKLGADVTGLGGFSSIVGNLGQNVQVRNVELTFTRFTTGNSHTAYA 149 (351)
T ss_pred EEEEEEEccccCHHHHhhCHHHHHHHHHHHHHHHHHcCCeEEeecchhhhhccccccccccceEEEEEecccCCccchHH
Confidence 4789999999843 1223466666655444 3333 211 222111000 000112236665
Q ss_pred ----HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------CH-hhhc
Q 024306 123 ----CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NP-EQIT 177 (269)
Q Consensus 123 ----~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------------~l-~~~~ 177 (269)
+++.+++.|++++..+|.|+|+-|.+|.++++.|+.++....+++|... ++ .+++
T Consensus 150 a~r~Vl~~~~~lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~~ 229 (351)
T COG5322 150 ACRQVLKHFAQLGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYALP 229 (351)
T ss_pred HHHHHHHHHHHhCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeecccccc
Confidence 4566677899999999999999999999999999999988888875420 11 2344
Q ss_pred CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeecCCCC
Q 024306 178 SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCPVDD 214 (269)
Q Consensus 178 ~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~~~~~ 214 (269)
.++++|.+|+..++. |.+.++|||++|+|-||+.+-+
T Consensus 230 ~e~i~v~vAs~~~g~~I~pq~lkpg~~ivD~g~P~dvd 267 (351)
T COG5322 230 QEDILVWVASMPKGVEIFPQHLKPGCLIVDGGYPKDVD 267 (351)
T ss_pred ccceEEEEeecCCCceechhhccCCeEEEcCCcCcccc
Confidence 445555588777665 8999999999999999987644
No 75
>PLN02928 oxidoreductase family protein
Probab=98.45 E-value=2e-06 Score=80.69 Aligned_cols=134 Identities=21% Similarity=0.263 Sum_probs=92.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------------CCHhhhcCCCCEEEec
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------------KNPEQITSEADIVIAA 186 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------------~~l~~~~~~aDiVIsA 186 (269)
.++.||++.|||.|.+ |+.+|+.|...|++|+.++++. .++.+.+++||+|+.+
T Consensus 155 ~~l~gktvGIiG~G~I-G~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 155 DTLFGKTVFILGYGAI-GIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 4689999999999997 9999999999999999987641 1467888999999999
Q ss_pred cCC----CCcccCCC---cCCCcEEEEeeecCCCCCCC----CCCceeec---ccch--------HHHhhHcceecccCC
Q 024306 187 AGV----ANLVRGSW---LKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DVCY--------EEAMRLASVITPVPG 244 (269)
Q Consensus 187 tg~----p~~i~~~~---~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dvd~--------~~~~~~~~~~tpvpg 244 (269)
++. .++++.+. +++|+++|+++.....+... ...+++.| ||-. .-..-..-.+||-.+
T Consensus 234 lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde~AL~~AL~~g~i~gAaLDV~~~EP~~~~~pL~~~~nviiTPHia 313 (347)
T PLN02928 234 CTLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDYDAVLAALESGHLGGLAIDVAWSEPFDPDDPILKHPNVIITPHVA 313 (347)
T ss_pred CCCChHhhcccCHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEEccCCCCCCCCCChhhcCCCEEECCcCC
Confidence 883 34676664 58899999998766543110 00113432 5521 111112447888888
Q ss_pred cccHHHHHHHHHHHHHHHHHHh
Q 024306 245 GVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 245 GvGp~T~~mLl~n~v~a~~~~~ 266 (269)
|.-.-+..-+....++..++|+
T Consensus 314 ~~t~~~~~~~~~~~~~nl~~~~ 335 (347)
T PLN02928 314 GVTEYSYRSMGKIVGDAALQLH 335 (347)
T ss_pred CChHHHHHHHHHHHHHHHHHHH
Confidence 8765555555566666666554
No 76
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.38 E-value=6.7e-07 Score=84.60 Aligned_cols=124 Identities=25% Similarity=0.285 Sum_probs=83.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------CCHhhhcCCCCEEEeccC---C
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAAG---V 189 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------------~~l~~~~~~aDiVIsAtg---~ 189 (269)
+.+++|+|+|+|.+ |+.++..|...|++|++++++. .++.+.++++|+||++++ .
T Consensus 165 l~~~~VlViGaG~v-G~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 165 VEPGDVTIIGGGVV-GTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCCceEEEEcCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 57889999999886 9999999999999999998642 124566789999999984 2
Q ss_pred --CCcccCCC---cCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhh---HcceecccCCcccHHHHHHHHHHHHHH
Q 024306 190 --ANLVRGSW---LKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMR---LASVITPVPGGVGPMTVAMLLSNTLDS 261 (269)
Q Consensus 190 --p~~i~~~~---~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~---~~~~~tpvpgGvGp~T~~mLl~n~v~a 261 (269)
|.+++.++ ++++.+|+|+++.+- .+.++. + .+..|+..+.. ..-++.=.|+-+ |.|...++.|.+..
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva~d~G--G~~e~~-~-~t~~d~p~~~~~Gv~~~~v~nlP~~~-p~~aS~~~~~~l~~ 318 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVAIDQG--GCVETS-R-PTTHDQPTYAVHDVVHYCVANMPGAV-PKTSTYALTNATMP 318 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEecCCC--CCccCC-c-CCCCCCCEEEECCeEEEEeCCccccc-HHHHHHHHHHHHHH
Confidence 44577665 478999999998763 111100 1 12222111110 112233457777 99998888887765
Q ss_pred HH
Q 024306 262 AK 263 (269)
Q Consensus 262 ~~ 263 (269)
+-
T Consensus 319 ~l 320 (370)
T TIGR00518 319 YV 320 (370)
T ss_pred HH
Confidence 53
No 77
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=98.34 E-value=1.7e-06 Score=80.50 Aligned_cols=91 Identities=16% Similarity=0.225 Sum_probs=70.4
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHH-hCCC-EEEEEeCCC---------------------CCH
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ-RHHA-TVSIVHALT---------------------KNP 173 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~-~~ga-~Vti~~~~t---------------------~~l 173 (269)
.+++.+++....-. ....++++|||+|+. |+..+..|. .++. +|++++|+. .++
T Consensus 112 RTaa~~~laa~~la--~~~~~~v~iiGaG~q-A~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~ 188 (326)
T TIGR02992 112 RTAAAGAVAARHLA--REDSSVVAIFGAGMQ-ARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDP 188 (326)
T ss_pred HHHHHHHHHHHHhC--CCCCcEEEEECCCHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCH
Confidence 44556666655322 235689999999998 999999987 4674 699998862 245
Q ss_pred hhhcCCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeec
Q 024306 174 EQITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 174 ~~~~~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
++.+++||+||++|+.+.+ ++.+|+++|+.|..++.+
T Consensus 189 ~~av~~aDiVvtaT~s~~p~i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 189 RAAMSGADIIVTTTPSETPILHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred HHHhccCCEEEEecCCCCcEecHHHcCCCcEEEeeCCC
Confidence 5678899999999997665 789999999999999864
No 78
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.34 E-value=2.1e-06 Score=82.18 Aligned_cols=92 Identities=26% Similarity=0.384 Sum_probs=73.2
Q ss_pred CHHHHHHHH-HHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEE
Q 024306 119 TPKGCIELL-IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVI 184 (269)
Q Consensus 119 t~~g~~~~l-~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVI 184 (269)
|...+++.+ +..++.+.|++|+|+|+|.+ |+.+++.+...|++|+++.+.. ..+.+.++.+|+||
T Consensus 184 ~g~s~~~~i~r~t~~~l~GktVvViG~G~I-G~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI 262 (413)
T cd00401 184 CRESLIDGIKRATDVMIAGKVAVVAGYGDV-GKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFV 262 (413)
T ss_pred hchhhHHHHHHhcCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEE
Confidence 455555544 45678899999999999986 9999999999999999986542 13456778999999
Q ss_pred eccCCCCcccC---CCcCCCcEEEEeeecC
Q 024306 185 AAAGVANLVRG---SWLKPGAVVLDVGTCP 211 (269)
Q Consensus 185 sAtg~p~~i~~---~~~~~g~vViDv~~~~ 211 (269)
+++|.++.+.. +.+++|.+++.+|..+
T Consensus 263 ~atG~~~~i~~~~l~~mk~GgilvnvG~~~ 292 (413)
T cd00401 263 TTTGNKDIITGEHFEQMKDGAIVCNIGHFD 292 (413)
T ss_pred ECCCCHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 99998876654 4578999999999654
No 79
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=98.33 E-value=1.1e-06 Score=74.56 Aligned_cols=82 Identities=26% Similarity=0.382 Sum_probs=65.2
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCC-C---Cc
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV-A---NL 192 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~-p---~~ 192 (269)
.+.++.|++|.|+|.|.+ |+.+|+.|...|++|..++++. .++.+.+++||+|+...+. + ++
T Consensus 30 ~~~~l~g~tvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~l 108 (178)
T PF02826_consen 30 PGRELRGKTVGIIGYGRI-GRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGL 108 (178)
T ss_dssp TBS-STTSEEEEESTSHH-HHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTS
T ss_pred CccccCCCEEEEEEEcCC-cCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhcccccccee
Confidence 456789999999999997 9999999999999999998874 3577889999999999883 3 46
Q ss_pred ccCCC---cCCCcEEEEeeecCC
Q 024306 193 VRGSW---LKPGAVVLDVGTCPV 212 (269)
Q Consensus 193 i~~~~---~~~g~vViDv~~~~~ 212 (269)
++.+. +++|+++|+++....
T Consensus 109 i~~~~l~~mk~ga~lvN~aRG~~ 131 (178)
T PF02826_consen 109 INAEFLAKMKPGAVLVNVARGEL 131 (178)
T ss_dssp BSHHHHHTSTTTEEEEESSSGGG
T ss_pred eeeeeeeccccceEEEeccchhh
Confidence 77664 588999999986543
No 80
>PLN02494 adenosylhomocysteinase
Probab=98.32 E-value=1.8e-06 Score=83.60 Aligned_cols=90 Identities=24% Similarity=0.340 Sum_probs=72.3
Q ss_pred CHHHHHHHHH-HhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------CHhhhcCCCCEEE
Q 024306 119 TPKGCIELLI-RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVI 184 (269)
Q Consensus 119 t~~g~~~~l~-~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------~l~~~~~~aDiVI 184 (269)
|...+++.+. ..++.+.||+++|+|.|.+ |+.+++.+...|++|+++.+... .+.+.++.+|+||
T Consensus 236 tgqS~~d~i~r~t~i~LaGKtVvViGyG~I-Gr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI 314 (477)
T PLN02494 236 CRHSLPDGLMRATDVMIAGKVAVICGYGDV-GKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFV 314 (477)
T ss_pred ccccHHHHHHHhcCCccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEE
Confidence 4455555554 4477789999999999986 99999999999999999865431 3457788999999
Q ss_pred eccCCCCcccCC---CcCCCcEEEEeee
Q 024306 185 AAAGVANLVRGS---WLKPGAVVLDVGT 209 (269)
Q Consensus 185 sAtg~p~~i~~~---~~~~g~vViDv~~ 209 (269)
+++|..+.+..+ .+++|++++.+|.
T Consensus 315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr 342 (477)
T PLN02494 315 TTTGNKDIIMVDHMRKMKNNAIVCNIGH 342 (477)
T ss_pred ECCCCccchHHHHHhcCCCCCEEEEcCC
Confidence 999988876433 5789999999997
No 81
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=98.28 E-value=1.3e-05 Score=76.04 Aligned_cols=142 Identities=21% Similarity=0.233 Sum_probs=98.1
Q ss_pred HHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCCEEEeccCC-C-----
Q 024306 126 LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV-A----- 190 (269)
Q Consensus 126 ~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------~~l~~~~~~aDiVIsAtg~-p----- 190 (269)
+.++.+.++.||++.|||.|.+ |+.+++.|...|.+|..+++.. .++.+.+++||+|+..++. +
T Consensus 106 l~r~~g~~l~gktvGIIG~G~I-G~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~~ 184 (381)
T PRK00257 106 LAEREGVDLAERTYGVVGAGHV-GGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILEECDVISLHTPLTKEGEHP 184 (381)
T ss_pred HhcccCCCcCcCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHhhCCEEEEeCcCCCCcccc
Confidence 3345678899999999999996 9999999999999999987531 2577888999999988873 2
Q ss_pred --CcccCC---CcCCCcEEEEeeecCCCCCCCC----CCce---eecccch------HHHhhHcceecccCCcccHHHHH
Q 024306 191 --NLVRGS---WLKPGAVVLDVGTCPVDDPSCE----YGYR---LMGDVCY------EEAMRLASVITPVPGGVGPMTVA 252 (269)
Q Consensus 191 --~~i~~~---~~~~g~vViDv~~~~~~~~~~~----~~~~---l~GDvd~------~~~~~~~~~~tpvpgGvGp~T~~ 252 (269)
++++.+ .+++|+++|+++..+..+.... ..++ ..=||=. ..+....-.+||-.+|...=+..
T Consensus 185 T~~li~~~~l~~mk~gailIN~aRG~vVde~AL~~aL~~g~i~~a~LDV~e~EP~~~~~L~~~nvi~TPHiAg~s~e~~~ 264 (381)
T PRK00257 185 TRHLLDEAFLASLRPGAWLINASRGAVVDNQALREALLSGEDLDAVLDVWEGEPQIDLELADLCTIATPHIAGYSLDGKA 264 (381)
T ss_pred ccccCCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCChhhhhCCEEEcCccccCCHHHHH
Confidence 356655 4688999999987765431100 0011 2334411 11233356789988988766555
Q ss_pred HHHHHHHHHHHHHhCC
Q 024306 253 MLLSNTLDSAKRAYGF 268 (269)
Q Consensus 253 mLl~n~v~a~~~~~~~ 268 (269)
......++++.+|++.
T Consensus 265 r~~~~~~~nl~~~~~~ 280 (381)
T PRK00257 265 RGTAQIYQALCRFFGI 280 (381)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 6666666676777664
No 82
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=98.28 E-value=1.5e-05 Score=75.58 Aligned_cols=141 Identities=19% Similarity=0.247 Sum_probs=96.1
Q ss_pred HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCCEEEeccCC-C------
Q 024306 127 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV-A------ 190 (269)
Q Consensus 127 l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------~~l~~~~~~aDiVIsAtg~-p------ 190 (269)
.++.+.++.||++.|||.|.+ |+.+++.|...|.+|..+++.. .++.+.+++||+|+..++. +
T Consensus 107 ~r~~g~~L~gktvGIIG~G~I-G~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~~T 185 (378)
T PRK15438 107 AERDGFSLHDRTVGIVGVGNV-GRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKDGPYKT 185 (378)
T ss_pred hccCCCCcCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCCccccc
Confidence 345678899999999999986 9999999999999999987421 2578889999999977772 2
Q ss_pred -CcccCC---CcCCCcEEEEeeecCCCCCCCC-----CC--ceeecccch------HHHhhHcceecccCCcccHHHHHH
Q 024306 191 -NLVRGS---WLKPGAVVLDVGTCPVDDPSCE-----YG--YRLMGDVCY------EEAMRLASVITPVPGGVGPMTVAM 253 (269)
Q Consensus 191 -~~i~~~---~~~~g~vViDv~~~~~~~~~~~-----~~--~~l~GDvd~------~~~~~~~~~~tpvpgGvGp~T~~m 253 (269)
++++.+ .+++|+++|+++..+..+.... .| ....=||-. ....+....+||-.+|...=+...
T Consensus 186 ~~li~~~~l~~mk~gailIN~aRG~vVDe~AL~~aL~~g~~~ga~LDV~e~EP~~~~~Ll~~~~i~TPHiAg~s~e~~~~ 265 (378)
T PRK15438 186 LHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLKKVDIGTPHIAGYTLEGKAR 265 (378)
T ss_pred ccccCHHHHhcCCCCcEEEECCCchhcCHHHHHHHHHhCCCcEEEEecCCCCCCCchhhhhcCCEECCccCcCcHHHHHH
Confidence 346555 3588999999997765432100 01 013345521 012233347899999986655555
Q ss_pred HHHHHHHHHHHHhCC
Q 024306 254 LLSNTLDSAKRAYGF 268 (269)
Q Consensus 254 Ll~n~v~a~~~~~~~ 268 (269)
.....++++.+|+|.
T Consensus 266 ~~~~~~~~l~~~~~~ 280 (378)
T PRK15438 266 GTTQVFEAYSKFIGH 280 (378)
T ss_pred HHHHHHHHHHHHHcC
Confidence 555566666666663
No 83
>PRK08291 ectoine utilization protein EutC; Validated
Probab=98.19 E-value=4.9e-06 Score=77.44 Aligned_cols=91 Identities=18% Similarity=0.243 Sum_probs=70.6
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh-CCC-EEEEEeCCC---------------------CCH
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR-HHA-TVSIVHALT---------------------KNP 173 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~-~ga-~Vti~~~~t---------------------~~l 173 (269)
.+++.+++....-. ....++++|||+|+. |+..+..|.. ++. +|++++|+. .++
T Consensus 115 rT~a~~~~a~~~la--~~~~~~v~IiGaG~~-a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~ 191 (330)
T PRK08291 115 RTAAAGAVAARHLA--REDASRAAVIGAGEQ-ARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDV 191 (330)
T ss_pred HHHHHHHHHHHHhC--CCCCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCH
Confidence 45667777776422 335689999999998 9998888874 554 699998762 345
Q ss_pred hhhcCCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeec
Q 024306 174 EQITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 174 ~~~~~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
.+.+.+||+||+||+...+ ++.+|+++|+.|..++.+
T Consensus 192 ~~al~~aDiVi~aT~s~~p~i~~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 192 HEAVAGADIIVTTTPSEEPILKAEWLHPGLHVTAMGSD 229 (330)
T ss_pred HHHHccCCEEEEeeCCCCcEecHHHcCCCceEEeeCCC
Confidence 6778899999999997665 788999999999998865
No 84
>PRK13243 glyoxylate reductase; Reviewed
Probab=98.19 E-value=1.8e-05 Score=73.85 Aligned_cols=134 Identities=16% Similarity=0.158 Sum_probs=87.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCCEEEeccCC-C---CcccC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV-A---NLVRG 195 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------~~l~~~~~~aDiVIsAtg~-p---~~i~~ 195 (269)
.++.||++.|||.|.+ |+.+|+.|...|++|..+++.. .++.+.+++||+|+.+++. + +++..
T Consensus 146 ~~L~gktvgIiG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~~ 224 (333)
T PRK13243 146 YDVYGKTIGIIGFGRI-GQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMINE 224 (333)
T ss_pred cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccCH
Confidence 4689999999999887 9999999999999999987652 2467788999999999984 2 35654
Q ss_pred C---CcCCCcEEEEeeecCCCCCCC----CCCceeec---ccch-------HHHhhHcceecccCCcccHHHHHHHHHHH
Q 024306 196 S---WLKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DVCY-------EEAMRLASVITPVPGGVGPMTVAMLLSNT 258 (269)
Q Consensus 196 ~---~~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dvd~-------~~~~~~~~~~tpvpgGvGp~T~~mLl~n~ 258 (269)
+ .+++|+++|+++.....+... ...+++-| ||-. .-..-..-.+||-.+|.-.-+..-+....
T Consensus 225 ~~~~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gAaLDV~~~EP~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~ 304 (333)
T PRK13243 225 ERLKLMKPTAILVNTARGKVVDTKALVKALKEGWIAGAGLDVFEEEPYYNEELFSLKNVVLAPHIGSATFEAREGMAELV 304 (333)
T ss_pred HHHhcCCCCeEEEECcCchhcCHHHHHHHHHcCCeEEEEeccCCCCCCCCchhhcCCCEEECCcCCcCHHHHHHHHHHHH
Confidence 4 468899999999776543110 00113332 4421 11111234678888876543343444444
Q ss_pred HHHHHHHh
Q 024306 259 LDSAKRAY 266 (269)
Q Consensus 259 v~a~~~~~ 266 (269)
++..++|+
T Consensus 305 ~~ni~~~~ 312 (333)
T PRK13243 305 AENLIAFK 312 (333)
T ss_pred HHHHHHHH
Confidence 44444443
No 85
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=98.18 E-value=2.1e-06 Score=78.52 Aligned_cols=77 Identities=29% Similarity=0.405 Sum_probs=64.3
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------CCHhhhcCCCCEEEeccC----
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAAG---- 188 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------------~~l~~~~~~aDiVIsAtg---- 188 (269)
....+|+|||.|-+ |.-.|+++...||+|+|...+. .++++.++.||+||.|+=
T Consensus 166 V~~~kv~iiGGGvv-gtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpga 244 (371)
T COG0686 166 VLPAKVVVLGGGVV-GTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGA 244 (371)
T ss_pred CCCccEEEECCccc-cchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCC
Confidence 46678999998765 9999999999999999997551 256788999999999883
Q ss_pred -CCCcccCCC---cCCCcEEEEeeecC
Q 024306 189 -VANLVRGSW---LKPGAVVLDVGTCP 211 (269)
Q Consensus 189 -~p~~i~~~~---~~~g~vViDv~~~~ 211 (269)
.|.+++++| ++||+++||++++.
T Consensus 245 kaPkLvt~e~vk~MkpGsVivDVAiDq 271 (371)
T COG0686 245 KAPKLVTREMVKQMKPGSVIVDVAIDQ 271 (371)
T ss_pred CCceehhHHHHHhcCCCcEEEEEEEcC
Confidence 366788886 47899999999975
No 86
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.13 E-value=1.1e-05 Score=79.12 Aligned_cols=90 Identities=23% Similarity=0.317 Sum_probs=69.3
Q ss_pred HHHHHHHHHhCC----------CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------C---
Q 024306 121 KGCIELLIRSGV----------EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------N--- 172 (269)
Q Consensus 121 ~g~~~~l~~~~~----------~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------~--- 172 (269)
.|+++....++. .+.+.+|+|+|+|.+ |..++..+...|+.|+++.++.. +
T Consensus 139 ~Avi~Aa~~lgr~~~g~~taag~vp~akVlViGaG~i-Gl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e 217 (511)
T TIGR00561 139 RAIIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE 217 (511)
T ss_pred HHHHHHHHHhhhhcCCceecCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccc
Confidence 556666665543 245689999999886 99999999999999999865410 0
Q ss_pred -----------------------HhhhcCCCCEEEecc---C--CCCcccCCC---cCCCcEEEEeeecC
Q 024306 173 -----------------------PEQITSEADIVIAAA---G--VANLVRGSW---LKPGAVVLDVGTCP 211 (269)
Q Consensus 173 -----------------------l~~~~~~aDiVIsAt---g--~p~~i~~~~---~~~g~vViDv~~~~ 211 (269)
+.+.++++||||+++ | .|.++++++ +|+|.+|+|++..+
T Consensus 218 ~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~ 287 (511)
T TIGR00561 218 EGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQ 287 (511)
T ss_pred cccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCC
Confidence 335578899999999 5 455688886 47899999999865
No 87
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=98.12 E-value=9.8e-06 Score=70.30 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=67.0
Q ss_pred cCCHHHHHHHHH----Hh--CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCH--------------hhh
Q 024306 117 PCTPKGCIELLI----RS--GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--------------EQI 176 (269)
Q Consensus 117 p~t~~g~~~~l~----~~--~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l--------------~~~ 176 (269)
|.|++|+...++ +. +.+++||+++|+|.|.+ |+.+++.|.+.|++|++++++...+ .+.
T Consensus 3 ~aTg~Gv~~~~~~~~~~~~~~~~l~gk~v~I~G~G~v-G~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l 81 (200)
T cd01075 3 PPTAYGVFLGMKAAAEHLLGTDSLEGKTVAVQGLGKV-GYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEI 81 (200)
T ss_pred ChhHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhh
Confidence 568888755554 32 78899999999999975 9999999999999999887653211 122
Q ss_pred c-CCCCEEEeccCCCCcccCCCcCC--CcEEEEeeecCCC
Q 024306 177 T-SEADIVIAAAGVANLVRGSWLKP--GAVVLDVGTCPVD 213 (269)
Q Consensus 177 ~-~~aDiVIsAtg~p~~i~~~~~~~--g~vViDv~~~~~~ 213 (269)
. .++|+++.++.. +.++.+.++. ..+|++-+-+|..
T Consensus 82 ~~~~~Dv~vp~A~~-~~I~~~~~~~l~~~~v~~~AN~~~~ 120 (200)
T cd01075 82 YSVDADVFAPCALG-GVINDDTIPQLKAKAIAGAANNQLA 120 (200)
T ss_pred ccccCCEEEecccc-cccCHHHHHHcCCCEEEECCcCccC
Confidence 2 379999966542 3555555432 4577887776653
No 88
>PRK07574 formate dehydrogenase; Provisional
Probab=98.06 E-value=2.6e-05 Score=74.22 Aligned_cols=134 Identities=16% Similarity=0.204 Sum_probs=90.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCC-C---Ccc
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV-A---NLV 193 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~-p---~~i 193 (269)
.++.||+|.|||.|.+ |+.+|+.|...|++|...+++. .++.+.+++||+|+...+. + +++
T Consensus 188 ~~L~gktVGIvG~G~I-G~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 266 (385)
T PRK07574 188 YDLEGMTVGIVGAGRI-GLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLF 266 (385)
T ss_pred eecCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHh
Confidence 4589999999999996 9999999999999999988652 2567889999999999983 2 356
Q ss_pred cCC---CcCCCcEEEEeeecCCCCCCC----CCCce---eecccchHH--------HhhHcceecccCCcccHHHHHHHH
Q 024306 194 RGS---WLKPGAVVLDVGTCPVDDPSC----EYGYR---LMGDVCYEE--------AMRLASVITPVPGGVGPMTVAMLL 255 (269)
Q Consensus 194 ~~~---~~~~g~vViDv~~~~~~~~~~----~~~~~---l~GDvd~~~--------~~~~~~~~tpvpgGvGp~T~~mLl 255 (269)
+.+ .+|+|+++|+++.-...+... ...++ ...||-+.+ ..-..-.+||-.+|.-.=+...+.
T Consensus 267 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~i~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~T~e~~~~~~ 346 (385)
T PRK07574 267 DADVLSRMKRGSYLVNTARGKIVDRDAVVRALESGHLAGYAGDVWFPQPAPADHPWRTMPRNGMTPHISGTTLSAQARYA 346 (385)
T ss_pred CHHHHhcCCCCcEEEECCCCchhhHHHHHHHHHhCCccEEEEecCCCCCCCCCChHHhCCCeEECCccccCcHHHHHHHH
Confidence 654 468899999999765432100 00012 335663211 111244688888887544444444
Q ss_pred HHHHHHHHHHh
Q 024306 256 SNTLDSAKRAY 266 (269)
Q Consensus 256 ~n~v~a~~~~~ 266 (269)
...++..++|+
T Consensus 347 ~~~~~ni~~~~ 357 (385)
T PRK07574 347 AGTREILECFF 357 (385)
T ss_pred HHHHHHHHHHH
Confidence 55555555554
No 89
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=98.02 E-value=8.3e-06 Score=70.90 Aligned_cols=113 Identities=19% Similarity=0.286 Sum_probs=72.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-CCH-----------------hhhcCCCCEEEeccCCCCc-
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP-----------------EQITSEADIVIAAAGVANL- 192 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-~~l-----------------~~~~~~aDiVIsAtg~p~~- 192 (269)
++++||+|+|||+|.+ |...+..|...|+.|+++++.- +.+ .+.+..+|+||.||+.+..
T Consensus 6 l~l~~k~vLVIGgG~v-a~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~elN 84 (202)
T PRK06718 6 IDLSNKRVVIVGGGKV-AGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPRVN 84 (202)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHHHH
Confidence 4789999999999986 9999999999999999997542 111 2357889999999997652
Q ss_pred --ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhh---HcceecccCCcccHHHHHHHHHHHHH
Q 024306 193 --VRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMR---LASVITPVPGGVGPMTVAMLLSNTLD 260 (269)
Q Consensus 193 --i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~---~~~~~tpvpgGvGp~T~~mLl~n~v~ 260 (269)
+.... +.+. ++.++-+|.. +|+-+.++.+ ..-+++ -||-+|..+..|-++.-.
T Consensus 85 ~~i~~~a-~~~~-lvn~~d~~~~-----------~~f~~Pa~~~~g~l~iaIs--T~G~sP~la~~lr~~ie~ 142 (202)
T PRK06718 85 EQVKEDL-PENA-LFNVITDAES-----------GNVVFPSALHRGKLTISVS--TDGASPKLAKKIRDELEA 142 (202)
T ss_pred HHHHHHH-HhCC-cEEECCCCcc-----------CeEEEeeEEEcCCeEEEEE--CCCCChHHHHHHHHHHHH
Confidence 33222 3444 3344433321 1222222111 233444 578899888776555543
No 90
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.97 E-value=3.7e-05 Score=71.44 Aligned_cols=75 Identities=17% Similarity=0.190 Sum_probs=61.1
Q ss_pred CccceEEEEcCCcccHHHHHHHHH-hCCC-EEEEEeCCC---------------------CCHhhhcCCCCEEEeccCCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQ-RHHA-TVSIVHALT---------------------KNPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~-~~ga-~Vti~~~~t---------------------~~l~~~~~~aDiVIsAtg~p 190 (269)
...++++|||+|+. |+..+..+. .+++ +|++++|+. .++++.++++|+||++|+.+
T Consensus 125 ~~~~~v~iiGaG~~-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~ 203 (325)
T PRK08618 125 EDAKTLCLIGTGGQ-AKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAK 203 (325)
T ss_pred CCCcEEEEECCcHH-HHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCC
Confidence 35789999999998 998887765 4565 599998752 23566788999999999987
Q ss_pred Cc-ccCCCcCCCcEEEEeeec
Q 024306 191 NL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 191 ~~-i~~~~~~~g~vViDv~~~ 210 (269)
++ +. +|+++|+.|+-+|.+
T Consensus 204 ~p~i~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 204 TPVFS-EKLKKGVHINAVGSF 223 (325)
T ss_pred CcchH-HhcCCCcEEEecCCC
Confidence 76 78 999999999999865
No 91
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=97.97 E-value=7.8e-05 Score=69.36 Aligned_cols=135 Identities=18% Similarity=0.197 Sum_probs=88.6
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHH-hCCCEEEEEeCCC------------CCHhhhcCCCCEEEeccCC-C---Ccc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHALT------------KNPEQITSEADIVIAAAGV-A---NLV 193 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~-~~ga~Vti~~~~t------------~~l~~~~~~aDiVIsAtg~-p---~~i 193 (269)
+.++.||++.|||.|.+ |+.+++.|. ..|++|...++.. .++.+.+++||+|+..++. | ++|
T Consensus 140 g~~L~gktvGIiG~G~I-G~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li 218 (323)
T PRK15409 140 GTDVHHKTLGIVGMGRI-GMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLF 218 (323)
T ss_pred cCCCCCCEEEEEcccHH-HHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhcc
Confidence 34689999999999997 999999997 8899988776542 2567889999999998883 2 467
Q ss_pred cCC---CcCCCcEEEEeeecCCCCCCC----CCCceeec---ccchHH-------H-hhHcceecccCCcccHHHHHHHH
Q 024306 194 RGS---WLKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DVCYEE-------A-MRLASVITPVPGGVGPMTVAMLL 255 (269)
Q Consensus 194 ~~~---~~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dvd~~~-------~-~~~~~~~tpvpgGvGp~T~~mLl 255 (269)
..+ .+|+|+++|.++.-...+... ...+++.| ||-..+ + .-..-.+||-.||.-.=+..-+.
T Consensus 219 ~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf~~EP~~~~~pL~~~~nvilTPHia~~t~e~~~~~~ 298 (323)
T PRK15409 219 GAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSLPNVVAVPHIGSATHETRYNMA 298 (323)
T ss_pred CHHHHhcCCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecCCCCCCCCCchhhcCCCEEEcCcCCCCcHHHHHHHH
Confidence 665 458899999998776543110 00113433 442111 1 11234678888886544444444
Q ss_pred HHHHHHHHHHh
Q 024306 256 SNTLDSAKRAY 266 (269)
Q Consensus 256 ~n~v~a~~~~~ 266 (269)
.+.++..+.|+
T Consensus 299 ~~~~~ni~~~~ 309 (323)
T PRK15409 299 ACAVDNLIDAL 309 (323)
T ss_pred HHHHHHHHHHH
Confidence 55555555554
No 92
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=97.96 E-value=0.00013 Score=69.43 Aligned_cols=172 Identities=17% Similarity=0.304 Sum_probs=119.9
Q ss_pred hHHHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeC-CCCCCCCHHHHHhcCCccccccccc
Q 024306 22 SQTYVRNKIKACEEV-GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQL-PLPQHLDEGKILDAVSLEKDVDGFH 99 (269)
Q Consensus 22 s~~y~~~~~~~~~~~-Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~-Pl~~~~~~~~i~~~i~p~kdvdg~~ 99 (269)
+.--...|.-.|+++ ||++.-+++... +.+++.+.++.+. +.+-|||++- =.|+-+ .+...+....++--+|
T Consensus 99 g~pVmeGKa~Lfk~faGid~~pI~ld~~-~~~ei~~~Vkal~--p~FgginLedi~ap~cf---~ie~~lr~~~~IPvFh 172 (432)
T COG0281 99 GKPVMEGKAVLFKAFAGIDVLPIELDVG-TNNEIIEFVKALE--PTFGGINLEDIDAPRCF---AIEERLRYRMNIPVFH 172 (432)
T ss_pred CcchhhhHHHHHHHhcCCCceeeEeeCC-ChHHHHHHHHHhh--hcCCCcceeecccchhh---HHHHHHhhcCCCCccc
Confidence 333445677777766 599888888776 5788999999997 5799999963 222222 2333444455554443
Q ss_pred cceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC------
Q 024306 100 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT------ 170 (269)
Q Consensus 100 ~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga---~Vti~~~~t------ 170 (269)
.--.|- - --+..|++..|+-.+.+++..++++.|+|-+ |-+++.+|...|. .|++|+|.-
T Consensus 173 DDqqGT-------a---iv~lA~llnalk~~gk~l~d~kiv~~GAGAA-giaia~~l~~~g~~~~~i~~~D~~G~l~~~r 241 (432)
T COG0281 173 DDQQGT-------A---IVTLAALLNALKLTGKKLKDQKIVINGAGAA-GIAIADLLVAAGVKEENIFVVDRKGLLYDGR 241 (432)
T ss_pred ccccHH-------H---HHHHHHHHHHHHHhCCCccceEEEEeCCcHH-HHHHHHHHHHhCCCcccEEEEecCCcccCCC
Confidence 222221 1 1145788999999999999999999999998 9999999999997 599997651
Q ss_pred CC------------------H-hhhcCCCCEEEeccCCCCcccCCCcCC---CcEEEEeeecCC
Q 024306 171 KN------------------P-EQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV 212 (269)
Q Consensus 171 ~~------------------l-~~~~~~aDiVIsAtg~p~~i~~~~~~~---g~vViDv~~~~~ 212 (269)
.+ - ...+..+|++|..++. +.+++||++. +-+|+=++ ||.
T Consensus 242 ~~~~~~~~k~~~a~~~~~~~~~~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfala-NP~ 303 (432)
T COG0281 242 EDLTMNQKKYAKAIEDTGERTLDLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALA-NPT 303 (432)
T ss_pred cccccchHHHHHHHhhhccccccccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecC-CCC
Confidence 00 0 2346789999988777 7888888754 56676666 543
No 93
>PRK06932 glycerate dehydrogenase; Provisional
Probab=97.94 E-value=2.5e-05 Score=72.36 Aligned_cols=134 Identities=21% Similarity=0.244 Sum_probs=90.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------CCHhhhcCCCCEEEeccCC----CCcccCCC--
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------KNPEQITSEADIVIAAAGV----ANLVRGSW-- 197 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------~~l~~~~~~aDiVIsAtg~----p~~i~~~~-- 197 (269)
.++.||++.|||.|.+ |+.+|+.|...|++|...++.. .++.+.+++||+|+...+. .++++.+.
T Consensus 143 ~~l~gktvgIiG~G~I-G~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~ 221 (314)
T PRK06932 143 TDVRGSTLGVFGKGCL-GTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLA 221 (314)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHH
Confidence 3689999999999997 9999999999999988776532 2478899999999998883 34676664
Q ss_pred -cCCCcEEEEeeecCCCCCCC----CCCcee---ecccchHH-------Hh-----hHcceecccCCcccHHHHHHHHHH
Q 024306 198 -LKPGAVVLDVGTCPVDDPSC----EYGYRL---MGDVCYEE-------AM-----RLASVITPVPGGVGPMTVAMLLSN 257 (269)
Q Consensus 198 -~~~g~vViDv~~~~~~~~~~----~~~~~l---~GDvd~~~-------~~-----~~~~~~tpvpgGvGp~T~~mLl~n 257 (269)
+|+|+++|.++.-...++.. ...+++ .-||-..+ +. -..-.+||-.+|.-.-+..-+...
T Consensus 222 ~mk~ga~lIN~aRG~~Vde~AL~~aL~~g~i~gAaLDV~~~EP~~~~~pl~~~~~~~pnvilTPHia~~t~e~~~~~~~~ 301 (314)
T PRK06932 222 LMKPTAFLINTGRGPLVDEQALLDALENGKIAGAALDVLVKEPPEKDNPLIQAAKRLPNLLITPHIAWASDSAVTTLVNK 301 (314)
T ss_pred hCCCCeEEEECCCccccCHHHHHHHHHcCCccEEEEecCCCCCCCCCChhhHhhcCCCCEEECCccccCcHHHHHHHHHH
Confidence 68899999998766543110 001133 33542110 11 123467888888765555555666
Q ss_pred HHHHHHHHh
Q 024306 258 TLDSAKRAY 266 (269)
Q Consensus 258 ~v~a~~~~~ 266 (269)
.++..++|+
T Consensus 302 ~~~ni~~~~ 310 (314)
T PRK06932 302 VAQNIEEFV 310 (314)
T ss_pred HHHHHHHHH
Confidence 666655554
No 94
>PRK06436 glycerate dehydrogenase; Provisional
Probab=97.93 E-value=2.5e-05 Score=72.03 Aligned_cols=82 Identities=18% Similarity=0.324 Sum_probs=66.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCCEEEeccCC----CCcccCC--
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV----ANLVRGS-- 196 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------~~l~~~~~~aDiVIsAtg~----p~~i~~~-- 196 (269)
..+.||++.|||.|.+ |+++|+.|...|++|..++++. .++.+.+++||+|+...+. .+++..+
T Consensus 118 ~~L~gktvgIiG~G~I-G~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~~~~l 196 (303)
T PRK06436 118 KLLYNKSLGILGYGGI-GRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPLTDETRGMINSKML 196 (303)
T ss_pred CCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCCCchhhcCcCHHHH
Confidence 4789999999999986 9999999999999999998742 3577889999999999883 2356544
Q ss_pred -CcCCCcEEEEeeecCCCC
Q 024306 197 -WLKPGAVVLDVGTCPVDD 214 (269)
Q Consensus 197 -~~~~g~vViDv~~~~~~~ 214 (269)
.+++|+++|+++.....+
T Consensus 197 ~~mk~ga~lIN~sRG~~vd 215 (303)
T PRK06436 197 SLFRKGLAIINVARADVVD 215 (303)
T ss_pred hcCCCCeEEEECCCccccC
Confidence 468999999999776543
No 95
>PRK06487 glycerate dehydrogenase; Provisional
Probab=97.90 E-value=3.3e-05 Score=71.59 Aligned_cols=134 Identities=16% Similarity=0.192 Sum_probs=90.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------CCHhhhcCCCCEEEeccCC----CCcccCCC---
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------KNPEQITSEADIVIAAAGV----ANLVRGSW--- 197 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------~~l~~~~~~aDiVIsAtg~----p~~i~~~~--- 197 (269)
.++.||++.|+|.|.+ |+.+|+.|...|++|...++.. .++.+.+++||+|+...+. .++|+.+.
T Consensus 144 ~~l~gktvgIiG~G~I-G~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~ 222 (317)
T PRK06487 144 VELEGKTLGLLGHGEL-GGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELAL 222 (317)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhc
Confidence 3689999999999997 9999999999999998876542 2578899999999999883 34677664
Q ss_pred cCCCcEEEEeeecCCCCCCCC----CCceee---cccchH-------HHh---hHcceecccCCcccHHHHHHHHHHHHH
Q 024306 198 LKPGAVVLDVGTCPVDDPSCE----YGYRLM---GDVCYE-------EAM---RLASVITPVPGGVGPMTVAMLLSNTLD 260 (269)
Q Consensus 198 ~~~g~vViDv~~~~~~~~~~~----~~~~l~---GDvd~~-------~~~---~~~~~~tpvpgGvGp~T~~mLl~n~v~ 260 (269)
+|+|+++|.++.....++... ..+++. =||-.. .+. -..-.+||-.+|.-.-+..-+....++
T Consensus 223 mk~ga~lIN~aRG~vVde~AL~~AL~~g~i~gAaLDVf~~EP~~~~~pl~~~~~pnvilTPHia~~t~e~~~~~~~~~~~ 302 (317)
T PRK06487 223 MKPGALLINTARGGLVDEQALADALRSGHLGGAATDVLSVEPPVNGNPLLAPDIPRLIVTPHSAWGSREARQRIVGQLAE 302 (317)
T ss_pred CCCCeEEEECCCccccCHHHHHHHHHcCCeeEEEeecCCCCCCCCCCchhhcCCCCEEECCccccCCHHHHHHHHHHHHH
Confidence 588999999987655331100 011332 244211 011 123467888888766555555555555
Q ss_pred HHHHHh
Q 024306 261 SAKRAY 266 (269)
Q Consensus 261 a~~~~~ 266 (269)
..++|+
T Consensus 303 ni~~~~ 308 (317)
T PRK06487 303 NARAFF 308 (317)
T ss_pred HHHHHH
Confidence 555554
No 96
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.90 E-value=4.7e-05 Score=74.79 Aligned_cols=90 Identities=23% Similarity=0.315 Sum_probs=66.5
Q ss_pred HHHHHHHHHhCC----------CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------C
Q 024306 121 KGCIELLIRSGV----------EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------K 171 (269)
Q Consensus 121 ~g~~~~l~~~~~----------~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~ 171 (269)
.++++....++. ...+.+|+|+|+|.+ |..++..+...||+|++++++. +
T Consensus 140 ~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGaG~i-GL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e 218 (509)
T PRK09424 140 RAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEE 218 (509)
T ss_pred HHHHHHHHHhcccCCCceeccCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEecccc
Confidence 566766666653 246999999999987 9999999999999988886541 0
Q ss_pred --------------CH--------hhhcCCCCEEEeccCCCC-----cccCCC---cCCCcEEEEeeecC
Q 024306 172 --------------NP--------EQITSEADIVIAAAGVAN-----LVRGSW---LKPGAVVLDVGTCP 211 (269)
Q Consensus 172 --------------~l--------~~~~~~aDiVIsAtg~p~-----~i~~~~---~~~g~vViDv~~~~ 211 (269)
+. .+.++.+|+||+++|.|. .++.++ +++|.+|+|++.++
T Consensus 219 ~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~ 288 (509)
T PRK09424 219 EGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAEN 288 (509)
T ss_pred ccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCC
Confidence 10 112357999999999643 455554 58999999999853
No 97
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.90 E-value=6.4e-05 Score=69.55 Aligned_cols=76 Identities=25% Similarity=0.325 Sum_probs=59.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHh-CC-CEEEEEeCCC--------------------CCHhhhcCCCCEEEeccCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~-~g-a~Vti~~~~t--------------------~~l~~~~~~aDiVIsAtg~p 190 (269)
....++++|||+|.. |++.+..+.. ++ .+|++++|+. .+..+.+++|||||++|+.+
T Consensus 122 ~~~~~~v~iiG~G~~-a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~ 200 (314)
T PRK06141 122 RKDASRLLVVGTGRL-ASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLST 200 (314)
T ss_pred CCCCceEEEECCcHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCC
Confidence 357899999999997 9999886554 45 4799998862 23456788999999999977
Q ss_pred Cc-ccCCCcCCCcEEEEeeec
Q 024306 191 NL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 191 ~~-i~~~~~~~g~vViDv~~~ 210 (269)
.+ ++.+|+++|++ ||....
T Consensus 201 ~pvl~~~~l~~g~~-i~~ig~ 220 (314)
T PRK06141 201 EPLVRGEWLKPGTH-LDLVGN 220 (314)
T ss_pred CCEecHHHcCCCCE-EEeeCC
Confidence 66 78899999994 555433
No 98
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.90 E-value=3.9e-05 Score=70.96 Aligned_cols=134 Identities=23% Similarity=0.208 Sum_probs=89.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCCEEEeccCC----CCcccCC--
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV----ANLVRGS-- 196 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------~~l~~~~~~aDiVIsAtg~----p~~i~~~-- 196 (269)
.++.||++.|||.|.+ |+.+|+++...|++|..+++.. .++.+.+++||+|+..++. .++|+.+
T Consensus 141 ~~L~gktvGIiG~G~I-G~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~ 219 (311)
T PRK08410 141 GEIKGKKWGIIGLGTI-GKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKEL 219 (311)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHH
Confidence 4689999999999997 9999999999999999887642 2578889999999998883 3467666
Q ss_pred -CcCCCcEEEEeeecCCCCCCC----CCCcee--ecccchHH-------Hhh----HcceecccCCcccHHHHHHHHHHH
Q 024306 197 -WLKPGAVVLDVGTCPVDDPSC----EYGYRL--MGDVCYEE-------AMR----LASVITPVPGGVGPMTVAMLLSNT 258 (269)
Q Consensus 197 -~~~~g~vViDv~~~~~~~~~~----~~~~~l--~GDvd~~~-------~~~----~~~~~tpvpgGvGp~T~~mLl~n~ 258 (269)
.+|+|+++|.++.....+... ...+++ .=||-..+ +.. -.-.+||-.||.-.=+..-+....
T Consensus 220 ~~Mk~~a~lIN~aRG~vVDe~AL~~AL~~g~i~AaLDV~~~EP~~~~~pL~~~~~~~NvilTPH~a~~t~e~~~~~~~~~ 299 (311)
T PRK08410 220 KLLKDGAILINVGRGGIVNEKDLAKALDEKDIYAGLDVLEKEPMEKNHPLLSIKNKEKLLITPHIAWASKEARKTLIEKV 299 (311)
T ss_pred HhCCCCeEEEECCCccccCHHHHHHHHHcCCeEEEEecCCCCCCCCCChhhccCCCCCEEECCccccCCHHHHHHHHHHH
Confidence 468899999988776543210 001132 23442111 111 134678888887554444444445
Q ss_pred HHHHHHHh
Q 024306 259 LDSAKRAY 266 (269)
Q Consensus 259 v~a~~~~~ 266 (269)
++..++|+
T Consensus 300 ~~nl~~~~ 307 (311)
T PRK08410 300 KENIKDFL 307 (311)
T ss_pred HHHHHHHH
Confidence 55555543
No 99
>PLN03139 formate dehydrogenase; Provisional
Probab=97.89 E-value=0.00011 Score=69.92 Aligned_cols=134 Identities=16% Similarity=0.227 Sum_probs=91.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCC-C---Ccc
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV-A---NLV 193 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~-p---~~i 193 (269)
.++.||+|.|||.|.+ |+.+++.|...|++|..++++. .++.+.+++||+|+..++. + +++
T Consensus 195 ~~L~gktVGIVG~G~I-G~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li 273 (386)
T PLN03139 195 YDLEGKTVGTVGAGRI-GRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMF 273 (386)
T ss_pred cCCCCCEEEEEeecHH-HHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHh
Confidence 4689999999999996 9999999999999998887641 2577889999999999884 2 256
Q ss_pred cCC---CcCCCcEEEEeeecCCCCCCC----CCCcee---ecccchHH--------HhhHcceecccCCcccHHHHHHHH
Q 024306 194 RGS---WLKPGAVVLDVGTCPVDDPSC----EYGYRL---MGDVCYEE--------AMRLASVITPVPGGVGPMTVAMLL 255 (269)
Q Consensus 194 ~~~---~~~~g~vViDv~~~~~~~~~~----~~~~~l---~GDvd~~~--------~~~~~~~~tpvpgGvGp~T~~mLl 255 (269)
+.+ .+++|+++|+++.....+... ...+++ ..||-+.+ ..-..-.+||-.+|.-.-+..-+.
T Consensus 274 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL~sG~l~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~t~~~~~r~~ 353 (386)
T PLN03139 274 NKERIAKMKKGVLIVNNARGAIMDTQAVADACSSGHIGGYGGDVWYPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRYA 353 (386)
T ss_pred CHHHHhhCCCCeEEEECCCCchhhHHHHHHHHHcCCceEEEEcCCCCCCCCCCChhhcCCCeEEcccccccCHHHHHHHH
Confidence 655 468899999999766533110 000133 45663221 111244788888887555555555
Q ss_pred HHHHHHHHHHh
Q 024306 256 SNTLDSAKRAY 266 (269)
Q Consensus 256 ~n~v~a~~~~~ 266 (269)
...++..++|+
T Consensus 354 ~~~~~nl~~~~ 364 (386)
T PLN03139 354 AGVKDMLDRYF 364 (386)
T ss_pred HHHHHHHHHHH
Confidence 55556666664
No 100
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed
Probab=97.87 E-value=0.00017 Score=73.85 Aligned_cols=167 Identities=15% Similarity=0.197 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCH---HHHHhcCCcccccccccc
Q 024306 25 YVRNKIKACEEVG-IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE---GKILDAVSLEKDVDGFHP 100 (269)
Q Consensus 25 y~~~~~~~~~~~G-i~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~---~~i~~~i~p~kdvdg~~~ 100 (269)
-...|.-.|+.+| |++.-+.+... +.+|+.++++.+- |++.||++. .+.. -++++.+...-|+-.+|.
T Consensus 88 v~egK~~l~~~~~gid~~~i~~~~~-d~de~v~~v~~~~--p~~g~i~~E-----D~~~p~~f~i~~~~~~~~~ip~f~D 159 (752)
T PRK07232 88 VMEGKGVLFKKFAGIDVFDIEVDEE-DPDKFIEAVAALE--PTFGGINLE-----DIKAPECFYIEEKLRERMDIPVFHD 159 (752)
T ss_pred HHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCccEEeee-----ecCCchHHHHHHHHHHhcCCCeecc
Confidence 3445777777765 89777777654 6889999998876 788899883 3332 334444333333333322
Q ss_pred ceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCC--------
Q 024306 101 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHAL-------- 169 (269)
Q Consensus 101 ~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga---~Vti~~~~-------- 169 (269)
- ..+---.+..|++..++-.+.++++.++++.|+|-+ |..++.+|...|. ++++|+++
T Consensus 160 D----------~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~ 228 (752)
T PRK07232 160 D----------QHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAA-AIACLNLLVALGAKKENIIVCDSKGVIYKGRT 228 (752)
T ss_pred c----------cchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHH-HHHHHHHHHHcCCCcccEEEEcCCCeecCCCc
Confidence 1 222112245778889999999999999999999998 9999999999997 59999654
Q ss_pred ---------------CCCHhhhcCCCCEEEeccCCCCcccCCCcCC---CcEEEEeeecCC
Q 024306 170 ---------------TKNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV 212 (269)
Q Consensus 170 ---------------t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~---g~vViDv~~~~~ 212 (269)
..+|.+.++.+|++|-..+ |+.++++|++. .-+|+=++ ||.
T Consensus 229 ~~~~~~k~~~a~~~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 287 (752)
T PRK07232 229 EGMDEWKAAYAVDTDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALA-NPD 287 (752)
T ss_pred ccccHHHHHHhccCCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecC-CCC
Confidence 1357899999999997766 88999998864 67787777 553
No 101
>PRK12862 malic enzyme; Reviewed
Probab=97.87 E-value=6.7e-05 Score=76.99 Aligned_cols=167 Identities=13% Similarity=0.189 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCH---HHHHhcCCcccccccccc
Q 024306 25 YVRNKIKACEEVG-IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE---GKILDAVSLEKDVDGFHP 100 (269)
Q Consensus 25 y~~~~~~~~~~~G-i~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~---~~i~~~i~p~kdvdg~~~ 100 (269)
-...|.-.|+.+| |++.-+.+... +++++.++++.+. |++.||++ |.+.. -++++.+...-|+-.+|.
T Consensus 96 v~egK~~l~~~~~gi~~~~i~~~~~-d~d~~v~~v~~~~--p~f~~i~~-----ED~~~~~~f~i~~~~~~~~~ip~f~D 167 (763)
T PRK12862 96 VMEGKAVLFKKFAGIDVFDIELDES-DPDKLVEIVAALE--PTFGGINL-----EDIKAPECFYIERELRERMKIPVFHD 167 (763)
T ss_pred hHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCcceeee-----ecccCchHHHHHHHHHhcCCCceEec
Confidence 3445666677665 89777777654 7899999998887 78889887 33332 344444433333333322
Q ss_pred ceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCC--------
Q 024306 101 LNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHAL-------- 169 (269)
Q Consensus 101 ~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga---~Vti~~~~-------- 169 (269)
+..+---.+..|++..++-.+.++++.++++.|+|.+ |..++.+|...|. ++++|+++
T Consensus 168 ----------D~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~ 236 (763)
T PRK12862 168 ----------DQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAA-ALACLDLLVSLGVKRENIWVTDIKGVVYEGRT 236 (763)
T ss_pred ----------CcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHH-HHHHHHHHHHcCCCcccEEEEcCCCeeeCCCC
Confidence 1222112355778899999999999999999999998 9999999999997 59999743
Q ss_pred ---------------CCCHhhhcCCCCEEEeccCCCCcccCCCcCC---CcEEEEeeecCC
Q 024306 170 ---------------TKNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV 212 (269)
Q Consensus 170 ---------------t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~---g~vViDv~~~~~ 212 (269)
..+|.+.++.+|++|-..+ |+.++++|++. .-+|+=++ ||.
T Consensus 237 ~~l~~~~~~~a~~~~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 295 (763)
T PRK12862 237 ELMDPWKARYAQKTDARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALA-NPT 295 (763)
T ss_pred ccccHHHHHHhhhcccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCC-CCc
Confidence 1357889999999998777 88999998764 67787777 553
No 102
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=97.86 E-value=2.7e-05 Score=71.20 Aligned_cols=81 Identities=27% Similarity=0.414 Sum_probs=67.6
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCCCCcccCC
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLVRGS 196 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~p~~i~~~ 196 (269)
...-+.||.++|.|.|.. |+..|+.|...|+.|+|..-.. -.+.+.++++||+|++||..+.|..+
T Consensus 208 TDvM~aGKv~Vv~GYGdV-GKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc~dii~~~ 286 (434)
T KOG1370|consen 208 TDVMIAGKVAVVCGYGDV-GKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGCKDIITGE 286 (434)
T ss_pred hhheecccEEEEeccCcc-chhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCCcchhhHH
Confidence 345679999999999995 9999999999999999885432 24678999999999999988888777
Q ss_pred Cc---CCCcEEEEeeecC
Q 024306 197 WL---KPGAVVLDVGTCP 211 (269)
Q Consensus 197 ~~---~~g~vViDv~~~~ 211 (269)
+| +++++|..+|+.-
T Consensus 287 H~~~mk~d~IvCN~Ghfd 304 (434)
T KOG1370|consen 287 HFDQMKNDAIVCNIGHFD 304 (434)
T ss_pred HHHhCcCCcEEecccccc
Confidence 54 6789999998753
No 103
>PRK08605 D-lactate dehydrogenase; Validated
Probab=97.86 E-value=4.1e-05 Score=71.43 Aligned_cols=80 Identities=23% Similarity=0.293 Sum_probs=63.8
Q ss_pred CCCccceEEEEcCCcccHHHHHHHH-HhCCCEEEEEeCCC-----------CCHhhhcCCCCEEEeccCC----CCcccC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLL-QRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGV----ANLVRG 195 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L-~~~ga~Vti~~~~t-----------~~l~~~~~~aDiVIsAtg~----p~~i~~ 195 (269)
.++.|++|.|||.|.+ |+++|+.| ...|++|+..+++. .++.+.+++||+|+.+++. .+++..
T Consensus 142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~~g~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~li~~ 220 (332)
T PRK08605 142 RSIKDLKVAVIGTGRI-GLAVAKIFAKGYGSDVVAYDPFPNAKAATYVDYKDTIEEAVEGADIVTLHMPATKYNHYLFNA 220 (332)
T ss_pred ceeCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCccHhHHhhccccCCHHHHHHhCCEEEEeCCCCcchhhhcCH
Confidence 4688999999999886 99999999 56788998887542 3677889999999999884 234543
Q ss_pred ---CCcCCCcEEEEeeecCC
Q 024306 196 ---SWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 196 ---~~~~~g~vViDv~~~~~ 212 (269)
+.+++|+++||++.-..
T Consensus 221 ~~l~~mk~gailIN~sRG~~ 240 (332)
T PRK08605 221 DLFKHFKKGAVFVNCARGSL 240 (332)
T ss_pred HHHhcCCCCcEEEECCCCcc
Confidence 35689999999997654
No 104
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.84 E-value=0.0001 Score=68.03 Aligned_cols=77 Identities=16% Similarity=0.137 Sum_probs=62.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHh-CCC-EEEEEeCCC-------------------CCHhhhcCCCCEEEeccCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQR-HHA-TVSIVHALT-------------------KNPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~-~ga-~Vti~~~~t-------------------~~l~~~~~~aDiVIsAtg~p 190 (269)
-....++++|||+|+. |+..+.++.. ++. +|.+++|+. .++.+.+.+||+||++|+.+
T Consensus 121 a~~~~~~v~IiGaG~q-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~ 199 (304)
T PRK07340 121 APAPPGDLLLIGTGVQ-ARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSR 199 (304)
T ss_pred CCCCCCEEEEECCcHH-HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCC
Confidence 3457899999999997 9999999865 564 699998762 24567889999999999987
Q ss_pred Cc-ccCCCcCCCcEEEEeeec
Q 024306 191 NL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 191 ~~-i~~~~~~~g~vViDv~~~ 210 (269)
++ ++. |++||+.|.=+|.+
T Consensus 200 ~Pl~~~-~~~~g~hi~~iGs~ 219 (304)
T PRK07340 200 TPVYPE-AARAGRLVVAVGAF 219 (304)
T ss_pred CceeCc-cCCCCCEEEecCCC
Confidence 76 665 79999999999865
No 105
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.84 E-value=4.1e-05 Score=70.86 Aligned_cols=82 Identities=12% Similarity=0.075 Sum_probs=66.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCCEEEeccCC-C---CcccC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV-A---NLVRG 195 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------~~l~~~~~~aDiVIsAtg~-p---~~i~~ 195 (269)
..++||++.|||.|.+ |+.+|+.|...|++|+..+++. .++.+.+++||+|+...+. + +++..
T Consensus 132 ~~l~g~tvgIvG~G~I-G~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~~ 210 (312)
T PRK15469 132 YHREDFTIGILGAGVL-GSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPETVGIINQ 210 (312)
T ss_pred CCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHHHHHHhHH
Confidence 4689999999999997 9999999999999998887542 2467889999999999884 2 24554
Q ss_pred C---CcCCCcEEEEeeecCCCC
Q 024306 196 S---WLKPGAVVLDVGTCPVDD 214 (269)
Q Consensus 196 ~---~~~~g~vViDv~~~~~~~ 214 (269)
+ .+++|+++|+++--..-+
T Consensus 211 ~~l~~mk~ga~lIN~aRG~vVd 232 (312)
T PRK15469 211 QLLEQLPDGAYLLNLARGVHVV 232 (312)
T ss_pred HHHhcCCCCcEEEECCCccccC
Confidence 4 468899999999776543
No 106
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.83 E-value=1.1e-05 Score=67.83 Aligned_cols=78 Identities=24% Similarity=0.334 Sum_probs=56.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC----------------C------------------------CC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------T------------------------KN 172 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~----------------t------------------------~~ 172 (269)
.+...+|+|+|+|.+ |+.++.+|...|++|++.+.. + ..
T Consensus 17 ~~~p~~vvv~G~G~v-g~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (168)
T PF01262_consen 17 GVPPAKVVVTGAGRV-GQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESN 95 (168)
T ss_dssp EE-T-EEEEESTSHH-HHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred CCCCeEEEEECCCHH-HHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHH
Confidence 356789999999886 999999999999999998643 1 12
Q ss_pred HhhhcCCCCEEEeccC-----CCCcccCCC---cCCCcEEEEeeecC
Q 024306 173 PEQITSEADIVIAAAG-----VANLVRGSW---LKPGAVVLDVGTCP 211 (269)
Q Consensus 173 l~~~~~~aDiVIsAtg-----~p~~i~~~~---~~~g~vViDv~~~~ 211 (269)
+.+.++.+|+||++.- .|.+++.++ ++++.+|+|+..+.
T Consensus 96 f~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 96 FAEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 4567888999996553 366788886 47899999999864
No 107
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.81 E-value=6.3e-05 Score=70.15 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=65.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------CCHhhhcCCCCEEEeccCCC----CcccCC-
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGVA----NLVRGS- 196 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------~~l~~~~~~aDiVIsAtg~p----~~i~~~- 196 (269)
..+.|+++.|||.|.+ |+++|..|...|++|+.++++. .++.+.+++||+|+.+++.. +.+..+
T Consensus 142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~t~~li~~~~ 220 (330)
T PRK12480 142 KPVKNMTVAIIGTGRI-GAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDKAM 220 (330)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHHHHHHHhHHH
Confidence 3689999999999996 9999999999999999987652 25778899999999999843 234433
Q ss_pred --CcCCCcEEEEeeecCCC
Q 024306 197 --WLKPGAVVLDVGTCPVD 213 (269)
Q Consensus 197 --~~~~g~vViDv~~~~~~ 213 (269)
.+++|+++|+++.-...
T Consensus 221 l~~mk~gavlIN~aRG~~v 239 (330)
T PRK12480 221 FDHVKKGAILVNAARGAVI 239 (330)
T ss_pred HhcCCCCcEEEEcCCcccc
Confidence 35789999999876553
No 108
>PLN02306 hydroxypyruvate reductase
Probab=97.77 E-value=6.4e-05 Score=71.56 Aligned_cols=134 Identities=16% Similarity=0.165 Sum_probs=86.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHH-hCCCEEEEEeCCC----------------------------CCHhhhcCCCCE
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHALT----------------------------KNPEQITSEADI 182 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~-~~ga~Vti~~~~t----------------------------~~l~~~~~~aDi 182 (269)
.++.||++.|||.|.+ |+.+|++|. ..|++|...++.. .++.+.+++||+
T Consensus 161 ~~L~gktvGIiG~G~I-G~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDi 239 (386)
T PLN02306 161 NLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADV 239 (386)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCE
Confidence 4689999999999997 999999985 8899998776431 267888999999
Q ss_pred EEeccCC----CCcccCC---CcCCCcEEEEeeecCCCCCCCC----CCceee---cccchH------HHhh-Hcceecc
Q 024306 183 VIAAAGV----ANLVRGS---WLKPGAVVLDVGTCPVDDPSCE----YGYRLM---GDVCYE------EAMR-LASVITP 241 (269)
Q Consensus 183 VIsAtg~----p~~i~~~---~~~~g~vViDv~~~~~~~~~~~----~~~~l~---GDvd~~------~~~~-~~~~~tp 241 (269)
|+..++. .++|+.+ ++|+|+++|+++.-..-+.... ..+++. =||-.. .+.+ ..-.+||
T Consensus 240 V~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~lVDe~AL~~AL~sg~i~gAaLDVf~~EP~~~~~L~~~pNVilTP 319 (386)
T PLN02306 240 ISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPVIDEVALVEHLKANPMFRVGLDVFEDEPYMKPGLADMKNAVVVP 319 (386)
T ss_pred EEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccccCHHHHHHHHHhCCeeEEEEeCCCCCCCCcchHhhCCCEEECC
Confidence 9988773 3467666 4688999999997655331100 001232 244111 1111 2346788
Q ss_pred cCCcccHHHHHHHHHHHHHHHHHHh
Q 024306 242 VPGGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 242 vpgGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
-.+|.-.-+..-+....++..++|+
T Consensus 320 Hiag~T~e~~~~~~~~~~~ni~~~~ 344 (386)
T PLN02306 320 HIASASKWTREGMATLAALNVLGKL 344 (386)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHH
Confidence 8787654444444444444444443
No 109
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.76 E-value=4.1e-05 Score=64.00 Aligned_cols=74 Identities=22% Similarity=0.342 Sum_probs=54.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----c-cc---
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----L-VR--- 194 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~-i~--- 194 (269)
++|-+||.|.+ |++++..|.+.|.+|++.+++. .++.+.++++|+||++++.+. . ..
T Consensus 2 ~~Ig~IGlG~m-G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGLGNM-GSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE--SHH-HHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEchHHH-HHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 57999999987 9999999999999999999873 356788899999999998633 2 23
Q ss_pred CCCcCCCcEEEEeeecC
Q 024306 195 GSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 195 ~~~~~~g~vViDv~~~~ 211 (269)
...+++|.++||+....
T Consensus 81 ~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 81 LAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp GGGS-TTEEEEE-SS--
T ss_pred hhccccceEEEecCCcc
Confidence 24467899999998653
No 110
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=97.75 E-value=6.8e-05 Score=69.79 Aligned_cols=135 Identities=22% Similarity=0.274 Sum_probs=91.1
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCC----CCcc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV----ANLV 193 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~----p~~i 193 (269)
+.++.||++-|||.|.+ |+.++..|...|.+|...++.. .++.+.+++||+|+.-++. .+++
T Consensus 137 g~el~gkTvGIiG~G~I-G~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~i 215 (324)
T COG0111 137 GTELAGKTVGIIGLGRI-GRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGLI 215 (324)
T ss_pred cccccCCEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhccc
Confidence 45788999999999997 9999999999999999998732 3588999999999998883 3467
Q ss_pred cCCC---cCCCcEEEEeeecCCCCCCC----CCCceee---cccchHH-------Hhh-HcceecccCCcccHHHHHHHH
Q 024306 194 RGSW---LKPGAVVLDVGTCPVDDPSC----EYGYRLM---GDVCYEE-------AMR-LASVITPVPGGVGPMTVAMLL 255 (269)
Q Consensus 194 ~~~~---~~~g~vViDv~~~~~~~~~~----~~~~~l~---GDvd~~~-------~~~-~~~~~tpvpgGvGp~T~~mLl 255 (269)
+.+. +|+|+++|.++.-...+... ...+++- =||-..+ +.+ -.-.+||-.||.-.-+...+.
T Consensus 216 ~~~~~a~MK~gailIN~aRG~vVde~aL~~AL~~G~i~gA~lDVf~~EPl~~~~pL~~~pnV~~TPHia~~T~ea~~~~~ 295 (324)
T COG0111 216 NAEELAKMKPGAILINAARGGVVDEDALLAALDSGKIAGAALDVFEEEPLPADSPLWDLPNVILTPHIGGSTDEAQERVA 295 (324)
T ss_pred CHHHHhhCCCCeEEEECCCcceecHHHHHHHHHcCCcceEEecCCCCCCCCCCChhhcCCCeEECCcccccCHHHHHHHH
Confidence 6653 58899999888665432100 0001221 1221111 111 133468888988665556666
Q ss_pred HHHHHHHHHHh
Q 024306 256 SNTLDSAKRAY 266 (269)
Q Consensus 256 ~n~v~a~~~~~ 266 (269)
.+.++...+|+
T Consensus 296 ~~~~~~i~~~l 306 (324)
T COG0111 296 EIVAENIVRYL 306 (324)
T ss_pred HHHHHHHHHHH
Confidence 66666666554
No 111
>PRK12861 malic enzyme; Reviewed
Probab=97.71 E-value=8.4e-05 Score=76.00 Aligned_cols=166 Identities=14% Similarity=0.202 Sum_probs=117.5
Q ss_pred HHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH---HHHhcCCccccccccccc
Q 024306 26 VRNKIKACEEVG-IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG---KILDAVSLEKDVDGFHPL 101 (269)
Q Consensus 26 ~~~~~~~~~~~G-i~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~---~i~~~i~p~kdvdg~~~~ 101 (269)
...|.-.|+++| |++.-+....+ ++++|.+.++.+.. .+-||++ +.+... ++++.+...-++-.||.-
T Consensus 93 meGK~~L~~~~agid~~di~~~~~-dpd~~v~~v~a~~~--~fg~i~l-----ED~~~p~~f~il~~~~~~~~ipvf~DD 164 (764)
T PRK12861 93 MEGKAVLFKKFAGIDVFDIEINET-DPDKLVDIIAGLEP--TFGGINL-----EDIKAPECFTVERKLRERMKIPVFHDD 164 (764)
T ss_pred HHHHHHHHhhccCCCccccccCCC-CHHHHHHHHHHHHh--hcCCcee-----eeccCchHHHHHHHHHhcCCCCeeccc
Confidence 445667777765 89777777653 68999988888874 6888776 333333 333333222133333321
Q ss_pred eecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCC---------
Q 024306 102 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHAL--------- 169 (269)
Q Consensus 102 n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga---~Vti~~~~--------- 169 (269)
..+---.+..|++..++-.+.++++.++++.|+|-+ |.+++.+|...|. ++++|+++
T Consensus 165 ----------~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaA-g~~ia~~l~~~G~~~~~i~~~D~~Gli~~~r~~ 233 (764)
T PRK12861 165 ----------QHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAA-ALACLDLLVDLGLPVENIWVTDIEGVVYRGRTT 233 (764)
T ss_pred ----------cchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHH-HHHHHHHHHHcCCChhhEEEEcCCCeeeCCCcc
Confidence 222111245778889999999999999999999998 9999999999998 59999743
Q ss_pred --------------CCCHhhhcCCCCEEEeccCCCCcccCCCcCC---CcEEEEeeecCC
Q 024306 170 --------------TKNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV 212 (269)
Q Consensus 170 --------------t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~---g~vViDv~~~~~ 212 (269)
..+|.+.++.+|++|-..+ |+.+++||++. .-+|+=++ ||.
T Consensus 234 ~l~~~k~~~a~~~~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLs-NPt 291 (764)
T PRK12861 234 LMDPDKERFAQETDARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALA-NPT 291 (764)
T ss_pred cCCHHHHHHHhhcCCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECC-CCC
Confidence 1357889999999997765 88999998864 67887777 554
No 112
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.69 E-value=6.3e-05 Score=58.25 Aligned_cols=59 Identities=24% Similarity=0.356 Sum_probs=45.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------CCHhhhcCCCCEEEeccCCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-----------~~l~~~~~~aDiVIsAtg~p~ 191 (269)
++++|++|+|||.|.. |..-++.|.+.||+|+++.... ..+++.+..+|+||.||+.+.
T Consensus 3 l~l~~~~vlVvGgG~v-a~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~ 72 (103)
T PF13241_consen 3 LDLKGKRVLVVGGGPV-AARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGADLVFAATDDPE 72 (103)
T ss_dssp E--TT-EEEEEEESHH-HHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTESEEEE-SS-HH
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhheEEEecCCCHH
Confidence 4689999999999996 9999999999999999997762 234567889999999998654
No 113
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.64 E-value=0.00015 Score=69.56 Aligned_cols=80 Identities=23% Similarity=0.370 Sum_probs=66.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------CCHhhhcCCCCEEEeccCC----CCcccCC-
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGV----ANLVRGS- 196 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------~~l~~~~~~aDiVIsAtg~----p~~i~~~- 196 (269)
.++.||++.|||.|.+ |+.+|+.|...|++|..+++.. .++.+.+++||+|+...+. -++++.+
T Consensus 147 ~~L~gktvGIiG~G~I-G~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~~~~ 225 (409)
T PRK11790 147 FEVRGKTLGIVGYGHI-GTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIGAEE 225 (409)
T ss_pred ccCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCCCChHHhhccCHHH
Confidence 5689999999999997 9999999999999999887642 2678899999999998883 2367655
Q ss_pred --CcCCCcEEEEeeecCC
Q 024306 197 --WLKPGAVVLDVGTCPV 212 (269)
Q Consensus 197 --~~~~g~vViDv~~~~~ 212 (269)
.+|+|+++|+++....
T Consensus 226 l~~mk~ga~lIN~aRG~~ 243 (409)
T PRK11790 226 LALMKPGAILINASRGTV 243 (409)
T ss_pred HhcCCCCeEEEECCCCcc
Confidence 4688999999995544
No 114
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=97.62 E-value=0.00017 Score=71.32 Aligned_cols=82 Identities=18% Similarity=0.289 Sum_probs=66.8
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCC----CCcc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV----ANLV 193 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~----p~~i 193 (269)
+.++.||++.|||.|.+ |+.+|+.|...|++|..+++.. .++.+.+++||+|+..++. .+++
T Consensus 133 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 211 (525)
T TIGR01327 133 GTELYGKTLGVIGLGRI-GSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLI 211 (525)
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCc
Confidence 35689999999999997 9999999999999999987631 2578889999999999883 2356
Q ss_pred cCC---CcCCCcEEEEeeecCCC
Q 024306 194 RGS---WLKPGAVVLDVGTCPVD 213 (269)
Q Consensus 194 ~~~---~~~~g~vViDv~~~~~~ 213 (269)
..+ .+++|+++|+++.....
T Consensus 212 ~~~~l~~mk~ga~lIN~aRG~~v 234 (525)
T TIGR01327 212 GAEELAKMKKGVIIVNCARGGII 234 (525)
T ss_pred CHHHHhcCCCCeEEEEcCCCcee
Confidence 544 46889999999977653
No 115
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.58 E-value=0.00019 Score=70.97 Aligned_cols=81 Identities=19% Similarity=0.286 Sum_probs=66.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCCEEEeccCC----CCcccC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV----ANLVRG 195 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------~~l~~~~~~aDiVIsAtg~----p~~i~~ 195 (269)
.++.||++.|||.|.+ |+.+|+.|...|++|..+++.. .++.+.+++||+|+.+++. .+++..
T Consensus 136 ~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~~ 214 (526)
T PRK13581 136 VELYGKTLGIIGLGRI-GSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIGA 214 (526)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcCH
Confidence 4688999999999996 9999999999999999988642 1467889999999999984 235655
Q ss_pred C---CcCCCcEEEEeeecCCC
Q 024306 196 S---WLKPGAVVLDVGTCPVD 213 (269)
Q Consensus 196 ~---~~~~g~vViDv~~~~~~ 213 (269)
+ .+++|+++|+++.....
T Consensus 215 ~~l~~mk~ga~lIN~aRG~~v 235 (526)
T PRK13581 215 EELAKMKPGVRIINCARGGII 235 (526)
T ss_pred HHHhcCCCCeEEEECCCCcee
Confidence 4 46889999999876553
No 116
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.58 E-value=0.00015 Score=68.82 Aligned_cols=112 Identities=21% Similarity=0.229 Sum_probs=78.8
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCC------------------------CCHhhhcCCCCEEEeccCCCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT------------------------KNPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t------------------------~~l~~~~~~aDiVIsAtg~p~ 191 (269)
++|+|||+|++ |+++|+.|++++ .+|++..|+. +.+.+.+++.|+|||+.+-..
T Consensus 2 ~~ilviGaG~V-g~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~ 80 (389)
T COG1748 2 MKILVIGAGGV-GSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV 80 (389)
T ss_pred CcEEEECCchh-HHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence 68999999885 999999999999 7899998871 235678899999999988543
Q ss_pred c--ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCC-cccHHHHHHHHHHHHHHH
Q 024306 192 L--VRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPG-GVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 192 ~--i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpg-GvGp~T~~mLl~n~v~a~ 262 (269)
- +-...++-|.-++|+.+.+... -+++..+++++ +|-+++ |+.|=-+..+....++-+
T Consensus 81 ~~~i~ka~i~~gv~yvDts~~~~~~------------~~~~~~a~~Ag-it~v~~~G~dPGi~nv~a~~a~~~~ 141 (389)
T COG1748 81 DLTILKACIKTGVDYVDTSYYEEPP------------WKLDEEAKKAG-ITAVLGCGFDPGITNVLAAYAAKEL 141 (389)
T ss_pred hHHHHHHHHHhCCCEEEcccCCchh------------hhhhHHHHHcC-eEEEcccCcCcchHHHHHHHHHHHh
Confidence 2 3344567789999999876421 11234466677 233432 455555667776666544
No 117
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.53 E-value=0.00015 Score=60.55 Aligned_cols=116 Identities=16% Similarity=0.131 Sum_probs=70.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-CCH--------------hhhcCCCCEEEeccCCCCc--cc
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP--------------EQITSEADIVIAAAGVANL--VR 194 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-~~l--------------~~~~~~aDiVIsAtg~p~~--i~ 194 (269)
++++|++|+|+|+|.+ |.-.+..|.+.|++|+++...- +++ .+.+.++|+||.||+.+.. .-
T Consensus 9 l~l~~~~vlVvGGG~v-a~rka~~Ll~~ga~V~VIsp~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e~N~~i 87 (157)
T PRK06719 9 FNLHNKVVVIIGGGKI-AYRKASGLKDTGAFVTVVSPEICKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHAVNMMV 87 (157)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCccCHHHHhccCcEEEecccChhcCCCceEEEECCCCHHHHHHH
Confidence 5789999999999886 9999999999999999985431 111 1347889999999986542 11
Q ss_pred CCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHh---hHcceecccCCcccHHHHHHHHHHHHHHH
Q 024306 195 GSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAM---RLASVITPVPGGVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 195 ~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~---~~~~~~tpvpgGvGp~T~~mLl~n~v~a~ 262 (269)
...-+... .+.+.-+|.. +|+-+.+.. +..-+++ -+|-+|.....|=++.-..+
T Consensus 88 ~~~a~~~~-~vn~~d~~~~-----------~~f~~pa~v~~~~l~iais--T~G~sP~la~~lr~~ie~~l 144 (157)
T PRK06719 88 KQAAHDFQ-WVNVVSDGTE-----------SSFHTPGVIRNDEYVVTIS--TSGKDPSFTKRLKQELTSIL 144 (157)
T ss_pred HHHHHHCC-cEEECCCCCc-----------CcEEeeeEEEECCeEEEEE--CCCcChHHHHHHHHHHHHHh
Confidence 11112232 3333333321 111122211 1223444 57889988888766655444
No 118
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.50 E-value=0.00027 Score=65.80 Aligned_cols=82 Identities=21% Similarity=0.347 Sum_probs=67.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------CHhhhcCCCCEEEeccCC----CCcccC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGV----ANLVRG 195 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------~l~~~~~~aDiVIsAtg~----p~~i~~ 195 (269)
.+++||++-|||.|.+ |+++|+.+...|++|...+++.. ++.+.+++||+|+-..|. -|+|..
T Consensus 142 ~~l~gktvGIiG~GrI-G~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLin~ 220 (324)
T COG1052 142 FDLRGKTLGIIGLGRI-GQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLINA 220 (324)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhcCH
Confidence 5789999999999997 99999999989999999987631 367889999999988883 346776
Q ss_pred CC---cCCCcEEEEeeecCCCC
Q 024306 196 SW---LKPGAVVLDVGTCPVDD 214 (269)
Q Consensus 196 ~~---~~~g~vViDv~~~~~~~ 214 (269)
+. +|+|+++|.++.-...+
T Consensus 221 ~~l~~mk~ga~lVNtaRG~~VD 242 (324)
T COG1052 221 EELAKMKPGAILVNTARGGLVD 242 (324)
T ss_pred HHHHhCCCCeEEEECCCccccC
Confidence 64 68899999988765543
No 119
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.46 E-value=0.00035 Score=63.91 Aligned_cols=73 Identities=29% Similarity=0.412 Sum_probs=58.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------CCHhhhcCCCCEEEeccCCCC-----cccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQITSEADIVIAAAGVAN-----LVRGS 196 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------~~l~~~~~~aDiVIsAtg~p~-----~i~~~ 196 (269)
.+|.+||-|.+ |.|+|..|.+.|.+|++++|+. .+..+..++||+||+.++.+. ++.++
T Consensus 1 ~kIafIGLG~M-G~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~ 79 (286)
T COG2084 1 MKIAFIGLGIM-GSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGEN 79 (286)
T ss_pred CeEEEEcCchh-hHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCcc
Confidence 36899999997 9999999999999999999883 234578899999999998532 23323
Q ss_pred ----CcCCCcEEEEeeec
Q 024306 197 ----WLKPGAVVLDVGTC 210 (269)
Q Consensus 197 ----~~~~g~vViDv~~~ 210 (269)
.+++|.++||+...
T Consensus 80 g~~~~~~~G~i~IDmSTi 97 (286)
T COG2084 80 GLLEGLKPGAIVIDMSTI 97 (286)
T ss_pred chhhcCCCCCEEEECCCC
Confidence 35689999999865
No 120
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.44 E-value=0.00032 Score=64.52 Aligned_cols=73 Identities=15% Similarity=0.263 Sum_probs=58.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-CCHhhhcCCCCEEEeccCCCC---c---ccCCCcCCCcEEEEe
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNPEQITSEADIVIAAAGVAN---L---VRGSWLKPGAVVLDV 207 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-~~l~~~~~~aDiVIsAtg~p~---~---i~~~~~~~g~vViDv 207 (269)
.+++|.|||.|.. |.+++..|.+.|.+|++.+|+. .++.+.++++|+||.+++... . +....++++.+++|+
T Consensus 3 ~~m~I~iiG~G~~-G~~lA~~l~~~G~~V~~~~r~~~~~~~~~~~~advvi~~vp~~~~~~v~~~l~~~~~~~~~ivi~~ 81 (308)
T PRK14619 3 QPKTIAILGAGAW-GSTLAGLASANGHRVRVWSRRSGLSLAAVLADADVIVSAVSMKGVRPVAEQVQALNLPPETIIVTA 81 (308)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCEEEEEeCCCCCCHHHHHhcCCEEEEECChHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 4578999999886 9999999999999999998864 567888899999999998632 1 222235678899997
Q ss_pred e
Q 024306 208 G 208 (269)
Q Consensus 208 ~ 208 (269)
.
T Consensus 82 s 82 (308)
T PRK14619 82 T 82 (308)
T ss_pred C
Confidence 5
No 121
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.40 E-value=0.00028 Score=58.67 Aligned_cols=69 Identities=26% Similarity=0.388 Sum_probs=49.9
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC----------------------------CCCHhhhcCCCCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------TKNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~----------------------------t~~l~~~~~~aDiVIsAtg~ 189 (269)
+|+|+|+|.. |.++|..|+.+|.+|++..+. +.++++.+++||+||-+++.
T Consensus 1 KI~ViGaG~~-G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs 79 (157)
T PF01210_consen 1 KIAVIGAGNW-GTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS 79 (157)
T ss_dssp EEEEESSSHH-HHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence 6899999997 999999999999999999654 24778899999999999996
Q ss_pred CC---cc--cCCCcCCCcEEEEe
Q 024306 190 AN---LV--RGSWLKPGAVVLDV 207 (269)
Q Consensus 190 p~---~i--~~~~~~~g~vViDv 207 (269)
.. ++ =..++++++.++=+
T Consensus 80 ~~~~~~~~~l~~~l~~~~~ii~~ 102 (157)
T PF01210_consen 80 QAHREVLEQLAPYLKKGQIIISA 102 (157)
T ss_dssp GGHHHHHHHHTTTSHTT-EEEET
T ss_pred HHHHHHHHHHhhccCCCCEEEEe
Confidence 32 11 12244667766543
No 122
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.38 E-value=0.00035 Score=66.26 Aligned_cols=73 Identities=18% Similarity=0.299 Sum_probs=58.2
Q ss_pred ccceEEEEc-CCcccHHHHHHHHHhCCCEEEEEeCCC-CCHhhhcCCCCEEEeccCCCC---cc---cCCCcCCCcEEEE
Q 024306 135 MGKNAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALT-KNPEQITSEADIVIAAAGVAN---LV---RGSWLKPGAVVLD 206 (269)
Q Consensus 135 ~gk~v~ViG-~gg~vg~~~a~~L~~~ga~Vti~~~~t-~~l~~~~~~aDiVIsAtg~p~---~i---~~~~~~~g~vViD 206 (269)
..++|+||| .|.+ |..++..|.+.|.+|+++++.. .+..+.+++||+||.|++... .+ .+ ++++++|+|
T Consensus 97 ~~~~I~IiGG~Glm-G~slA~~l~~~G~~V~~~d~~~~~~~~~~~~~aDlVilavP~~~~~~~~~~l~~--l~~~~iv~D 173 (374)
T PRK11199 97 DLRPVVIVGGKGQL-GRLFAKMLTLSGYQVRILEQDDWDRAEDILADAGMVIVSVPIHLTEEVIARLPP--LPEDCILVD 173 (374)
T ss_pred ccceEEEEcCCChh-hHHHHHHHHHCCCeEEEeCCCcchhHHHHHhcCCEEEEeCcHHHHHHHHHHHhC--CCCCcEEEE
Confidence 347899999 6665 9999999999999999998754 346677899999999998422 22 22 688999999
Q ss_pred eeec
Q 024306 207 VGTC 210 (269)
Q Consensus 207 v~~~ 210 (269)
++..
T Consensus 174 v~Sv 177 (374)
T PRK11199 174 LTSV 177 (374)
T ss_pred CCCc
Confidence 9863
No 123
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=97.36 E-value=0.00034 Score=65.19 Aligned_cols=80 Identities=16% Similarity=0.318 Sum_probs=63.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------CHhhhcCCCCEEEeccCC----CCccc
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVIAAAGV----ANLVR 194 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------~l~~~~~~aDiVIsAtg~----p~~i~ 194 (269)
.+++||+|.|+|.|.+ |+.+|+.|...|+.+.-..|+.. ++.+.+.++|+||.+.+- .+++.
T Consensus 158 ~~~~gK~vgilG~G~I-G~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~liN 236 (336)
T KOG0069|consen 158 YDLEGKTVGILGLGRI-GKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLIN 236 (336)
T ss_pred ccccCCEEEEecCcHH-HHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHhh
Confidence 5689999999999997 99999999999955666665432 667889999999998873 33565
Q ss_pred CC---CcCCCcEEEEeeecCC
Q 024306 195 GS---WLKPGAVVLDVGTCPV 212 (269)
Q Consensus 195 ~~---~~~~g~vViDv~~~~~ 212 (269)
.+ ++++|++++.++.-..
T Consensus 237 k~~~~~mk~g~vlVN~aRG~i 257 (336)
T KOG0069|consen 237 KKFIEKMKDGAVLVNTARGAI 257 (336)
T ss_pred HHHHHhcCCCeEEEecccccc
Confidence 55 5688999999886543
No 124
>PRK06823 ornithine cyclodeaminase; Validated
Probab=97.36 E-value=0.00056 Score=63.47 Aligned_cols=75 Identities=9% Similarity=0.160 Sum_probs=60.0
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhC-C-CEEEEEeCCC--------------------CCHhhhcCCCCEEEeccCCCCc
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVANL 192 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~-g-a~Vti~~~~t--------------------~~l~~~~~~aDiVIsAtg~p~~ 192 (269)
.-+++.|||+|.- |+.-+.++..- . -+|++.+|+. .+.++.+++||||+++|+...+
T Consensus 127 d~~~l~iiG~G~q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIV~taT~s~~P 205 (315)
T PRK06823 127 HVSAIGIVGTGIQ-ARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAANLIVTTTPSREP 205 (315)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHhcCCCEEEEecCCCCc
Confidence 5688999999886 88887776543 2 3699987762 2456788999999999997665
Q ss_pred -ccCCCcCCCcEEEEeeec
Q 024306 193 -VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 193 -i~~~~~~~g~vViDv~~~ 210 (269)
++.+|+++|+.|.=+|.+
T Consensus 206 ~~~~~~l~~G~hi~~iGs~ 224 (315)
T PRK06823 206 LLQAEDIQPGTHITAVGAD 224 (315)
T ss_pred eeCHHHcCCCcEEEecCCC
Confidence 899999999999988854
No 125
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=97.35 E-value=0.00056 Score=63.62 Aligned_cols=75 Identities=17% Similarity=0.290 Sum_probs=58.9
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhC-C-CEEEEEeCCC--------------------CCHhhhcCCCCEEEeccCCCCc
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVANL 192 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~-g-a~Vti~~~~t--------------------~~l~~~~~~aDiVIsAtg~p~~ 192 (269)
.-+++.|||+|.. |+.-+..|... . .+|.+++++. .+..+.+++|||||++|+...+
T Consensus 127 ~~~~lgiiG~G~q-A~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P 205 (325)
T TIGR02371 127 DSSVLGIIGAGRQ-AWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKP 205 (325)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 4688999999997 99866665432 2 4688987652 2456788999999999997554
Q ss_pred -ccCCCcCCCcEEEEeeec
Q 024306 193 -VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 193 -i~~~~~~~g~vViDv~~~ 210 (269)
+..+|+++|+.|.-+|.+
T Consensus 206 ~~~~~~l~~g~~v~~vGs~ 224 (325)
T TIGR02371 206 VVKADWVSEGTHINAIGAD 224 (325)
T ss_pred EecHHHcCCCCEEEecCCC
Confidence 789999999999999854
No 126
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.31 E-value=0.00021 Score=53.89 Aligned_cols=70 Identities=29% Similarity=0.340 Sum_probs=51.7
Q ss_pred eEEEEcCCcccHHHHHHHHHhCC---CEEEEE-eCCC---------------C-CHhhhcCCCCEEEeccCCCCc--ccC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHH---ATVSIV-HALT---------------K-NPEQITSEADIVIAAAGVANL--VRG 195 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~g---a~Vti~-~~~t---------------~-~l~~~~~~aDiVIsAtg~p~~--i~~ 195 (269)
|+.+||.|.+ |.+++..|.+.| .+|+++ +|+. . +..+.+++||+||-++.-..+ +-.
T Consensus 1 kI~iIG~G~m-g~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~~~~v~~ 79 (96)
T PF03807_consen 1 KIGIIGAGNM-GSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQLPEVLS 79 (96)
T ss_dssp EEEEESTSHH-HHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGGHHHHHH
T ss_pred CEEEECCCHH-HHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHHHHHHHH
Confidence 5889999997 999999999999 789965 6652 1 456778889999999985442 222
Q ss_pred --CCcCCCcEEEEee
Q 024306 196 --SWLKPGAVVLDVG 208 (269)
Q Consensus 196 --~~~~~g~vViDv~ 208 (269)
....++.++||+.
T Consensus 80 ~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 80 EIPHLLKGKLVISIA 94 (96)
T ss_dssp HHHHHHTTSEEEEES
T ss_pred HHhhccCCCEEEEeC
Confidence 2466788998875
No 127
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=97.31 E-value=0.00065 Score=62.62 Aligned_cols=75 Identities=13% Similarity=0.066 Sum_probs=60.5
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhC-CC-EEEEEeCCC---------------------CCHhhhcCCCCEEEeccCCCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRH-HA-TVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~-ga-~Vti~~~~t---------------------~~l~~~~~~aDiVIsAtg~p~ 191 (269)
.-+++.|||+|.- |+.-+..+... .. +|.+.+|+. .+.++.+++||||+++|+...
T Consensus 116 da~~l~iiGaG~Q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~ 194 (301)
T PRK06407 116 NVENFTIIGSGFQ-AETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDT 194 (301)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCC
Confidence 5689999999887 98877776643 33 688987762 246678899999999999766
Q ss_pred c-ccCCCcCCCcEEEEeeec
Q 024306 192 L-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 192 ~-i~~~~~~~g~vViDv~~~ 210 (269)
+ ++.+|++||+.|.=+|.+
T Consensus 195 P~~~~~~l~pg~hV~aiGs~ 214 (301)
T PRK06407 195 PIFNRKYLGDEYHVNLAGSN 214 (301)
T ss_pred cEecHHHcCCCceEEecCCC
Confidence 5 799999999999988865
No 128
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=97.28 E-value=0.00052 Score=62.46 Aligned_cols=92 Identities=13% Similarity=0.274 Sum_probs=74.5
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC----CC-------EEEEEeCC------------------
Q 024306 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HA-------TVSIVHAL------------------ 169 (269)
Q Consensus 119 t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~----ga-------~Vti~~~~------------------ 169 (269)
+-.|++..++-.+.++++.+++++|+|.+ |..++.+|... |. .+++++++
T Consensus 8 ~lAgllnAlk~~g~~l~d~~iv~~GAGsA-g~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a 86 (279)
T cd05312 8 ALAGLLAALRITGKPLSDQRILFLGAGSA-GIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFA 86 (279)
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHH
Confidence 44678899999999999999999999998 99999988765 76 58888654
Q ss_pred --C-----CCHhhhcC--CCCEEEeccCCCCcccCCCcC------CCcEEEEeeecCC
Q 024306 170 --T-----KNPEQITS--EADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV 212 (269)
Q Consensus 170 --t-----~~l~~~~~--~aDiVIsAtg~p~~i~~~~~~------~g~vViDv~~~~~ 212 (269)
+ .+|.+.++ ++|++|-.++.++.|++++++ +.-+|+=++ ||.
T Consensus 87 ~~~~~~~~~~L~e~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 143 (279)
T cd05312 87 RKDEEKEGKSLLEVVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALS-NPT 143 (279)
T ss_pred hhcCcccCCCHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECC-CcC
Confidence 1 25778888 889999988888889999875 356777776 554
No 129
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=97.24 E-value=0.0007 Score=62.66 Aligned_cols=75 Identities=21% Similarity=0.309 Sum_probs=48.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHh-CCC-EEEEEeCCC--------------------CCHhhhcCCCCEEEeccCCCC-
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQR-HHA-TVSIVHALT--------------------KNPEQITSEADIVIAAAGVAN- 191 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~-~ga-~Vti~~~~t--------------------~~l~~~~~~aDiVIsAtg~p~- 191 (269)
.-+++.|||+|.- |+.-+.+|.. +.. +|.+.+|+. .+.++.+++|||||++|+...
T Consensus 127 ~~~~l~viGaG~Q-A~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~ 205 (313)
T PF02423_consen 127 DARTLGVIGAGVQ-ARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTP 205 (313)
T ss_dssp T--EEEEE--SHH-HHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSE
T ss_pred CCceEEEECCCHH-HHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCC
Confidence 4478999999886 8887777654 444 699998762 356789999999999999755
Q ss_pred --cccCCCcCCCcEEEEeeec
Q 024306 192 --LVRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 192 --~i~~~~~~~g~vViDv~~~ 210 (269)
+++.+|+++|+.|.-+|..
T Consensus 206 ~P~~~~~~l~~g~hi~~iGs~ 226 (313)
T PF02423_consen 206 APVFDAEWLKPGTHINAIGSY 226 (313)
T ss_dssp EESB-GGGS-TT-EEEE-S-S
T ss_pred CccccHHHcCCCcEEEEecCC
Confidence 4899999999999999975
No 130
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.23 E-value=0.00063 Score=59.29 Aligned_cols=58 Identities=22% Similarity=0.339 Sum_probs=47.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-CH-----------------hhhcCCCCEEEeccCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NP-----------------EQITSEADIVIAAAGVA 190 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-~l-----------------~~~~~~aDiVIsAtg~p 190 (269)
++++||+|+|||+|.+ |..-+..|.+.||.|+++..... .+ .+.+..+|+||.||+.+
T Consensus 5 l~l~gk~vlVvGgG~v-a~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~ 80 (205)
T TIGR01470 5 ANLEGRAVLVVGGGDV-ALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDE 80 (205)
T ss_pred EEcCCCeEEEECcCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCH
Confidence 4689999999999886 99999999999999999965421 11 23467899999999975
No 131
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=97.21 E-value=0.0005 Score=61.78 Aligned_cols=92 Identities=14% Similarity=0.185 Sum_probs=73.9
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-----------EEEEEeCCC-----------------
Q 024306 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-----------TVSIVHALT----------------- 170 (269)
Q Consensus 119 t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-----------~Vti~~~~t----------------- 170 (269)
+-.|++..++-.+.++++.+++++|+|-+ |..++.+|...+. ++++++++-
T Consensus 8 ~lAgllnAlk~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~ 86 (254)
T cd00762 8 AVAGLLAALKVTKKKISEHKVLFNGAGAA-ALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLA 86 (254)
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHH
Confidence 44678889999999999999999999998 9999999876543 588886540
Q ss_pred ---------CCHhhhcC--CCCEEEeccCCCCcccCCCcCC------CcEEEEeeecCC
Q 024306 171 ---------KNPEQITS--EADIVIAAAGVANLVRGSWLKP------GAVVLDVGTCPV 212 (269)
Q Consensus 171 ---------~~l~~~~~--~aDiVIsAtg~p~~i~~~~~~~------g~vViDv~~~~~ 212 (269)
.+|.+.++ ++|++|-.++.|+.|++|+++. .-+|+=++ ||.
T Consensus 87 ~~~~~~~~~~~L~eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 144 (254)
T cd00762 87 RFANPERESGDLEDAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALS-NPT 144 (254)
T ss_pred HHcCcccccCCHHHHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECC-CcC
Confidence 25777888 8999999999889999998753 55777766 554
No 132
>PRK06046 alanine dehydrogenase; Validated
Probab=97.21 E-value=0.0009 Score=62.24 Aligned_cols=74 Identities=20% Similarity=0.327 Sum_probs=57.9
Q ss_pred ccceEEEEcCCcccHHHHHHHHHh-CCC-EEEEEeCCC---------------------CCHhhhcCCCCEEEeccCCCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQR-HHA-TVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~-~ga-~Vti~~~~t---------------------~~l~~~~~~aDiVIsAtg~p~ 191 (269)
.-+++.|||+|+. |+..+..|.. .+. .|.+++++. .++.+.+. +|+|+++|+...
T Consensus 128 ~~~~vgiiG~G~q-a~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~ 205 (326)
T PRK06046 128 DSKVVGIIGAGNQ-ARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRK 205 (326)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCC
Confidence 4678999999997 9998888764 455 488887652 13445565 999999999655
Q ss_pred c-ccCCCcCCCcEEEEeeec
Q 024306 192 L-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 192 ~-i~~~~~~~g~vViDv~~~ 210 (269)
+ ++.+|+++|+.|.-+|.+
T Consensus 206 P~~~~~~l~~g~hV~~iGs~ 225 (326)
T PRK06046 206 PVVKAEWIKEGTHINAIGAD 225 (326)
T ss_pred cEecHHHcCCCCEEEecCCC
Confidence 4 899999999999999854
No 133
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=97.21 E-value=0.00043 Score=62.22 Aligned_cols=92 Identities=14% Similarity=0.232 Sum_probs=70.8
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC----CC-------EEEEEeCC------------------
Q 024306 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HA-------TVSIVHAL------------------ 169 (269)
Q Consensus 119 t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~----ga-------~Vti~~~~------------------ 169 (269)
+-.|++..++-.+.++++.+++++|+|-+ |-.++.+|... |. ++++++++
T Consensus 8 ~lAgll~Al~~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a 86 (255)
T PF03949_consen 8 VLAGLLNALRVTGKKLSDQRIVFFGAGSA-GIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFA 86 (255)
T ss_dssp HHHHHHHHHHHHTS-GGG-EEEEEB-SHH-HHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHcEEEEeCCChh-HHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhh
Confidence 34678899999999999999999999998 99999988766 86 39999765
Q ss_pred --------CCCHhhhcCCC--CEEEeccCCCCcccCCCcCC------CcEEEEeeecCC
Q 024306 170 --------TKNPEQITSEA--DIVIAAAGVANLVRGSWLKP------GAVVLDVGTCPV 212 (269)
Q Consensus 170 --------t~~l~~~~~~a--DiVIsAtg~p~~i~~~~~~~------g~vViDv~~~~~ 212 (269)
..+|.+.++++ |++|-.++.++.|++|+++. .-+|+=+. ||.
T Consensus 87 ~~~~~~~~~~~L~eav~~~kPtvLIG~S~~~g~ft~evv~~Ma~~~erPIIF~LS-NPt 144 (255)
T PF03949_consen 87 RKTNPEKDWGSLLEAVKGAKPTVLIGLSGQGGAFTEEVVRAMAKHNERPIIFPLS-NPT 144 (255)
T ss_dssp BSSSTTT--SSHHHHHHCH--SEEEECSSSTTSS-HHHHHHCHHHSSSEEEEE-S-SSC
T ss_pred ccCcccccccCHHHHHHhcCCCEEEEecCCCCcCCHHHHHHHhccCCCCEEEECC-CCC
Confidence 02688899999 99999999999999998754 45777766 554
No 134
>PRK14804 ornithine carbamoyltransferase; Provisional
Probab=97.15 E-value=0.017 Score=53.47 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=95.3
Q ss_pred HHHHHHHHcCCeEEEEEcCC-CCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceeccc
Q 024306 28 NKIKACEEVGIKSIVTEFAD-GCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNL 106 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~-~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~l 106 (269)
+-..++.++|.++.++.-.. +...+.+.+..+-|+. .+|+|.+-.|--. ....+.+. ..+-.+|.|
T Consensus 60 SFe~A~~~LGg~~i~l~~~~~~~~~~~~~dt~~vls~--~~D~iv~R~~~~~--~~~~~a~~-------~~vPVINag-- 126 (311)
T PRK14804 60 SFEVAMTEMGGHGIYLDWMASNFQLSDIDLEARYLSR--NVSVIMARLKKHE--DLLVMKNG-------SQVPVINGC-- 126 (311)
T ss_pred HHHHHHHHcCCeEEEeCCCccccccccHHHHHHHHHh--cCCEEEEeCCChH--HHHHHHHH-------CCCCEEECC--
Confidence 45678999999998886532 1222344445666665 5899999877332 22222221 123345642
Q ss_pred ccCCCCCccccCCHHH-HHHHHHHhCC-CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------
Q 024306 107 AMRGREPLFIPCTPKG-CIELLIRSGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------- 170 (269)
Q Consensus 107 ~~g~~~~~~~p~t~~g-~~~~l~~~~~-~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------- 170 (269)
...+.||=+.+ +..+.++.+. +++|++|+++|.++-|.+.++.++...|++|++++...
T Consensus 127 -----~~~~HPtQaL~Dl~Ti~e~~g~~~l~g~~va~vGd~~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~ 201 (311)
T PRK14804 127 -----DNMFHPCQSLADIMTIALDSPEIPLNQKQLTYIGVHNNVVNSLIGITAALGIHLTLVTPIAAKENIHAQTVERAK 201 (311)
T ss_pred -----CCCCChHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCCccHHHHHHHHHHHH
Confidence 12366887777 4555555554 69999999999988889999999999999999997532
Q ss_pred --------CCHhhhcCCCCEEEec
Q 024306 171 --------KNPEQITSEADIVIAA 186 (269)
Q Consensus 171 --------~~l~~~~~~aDiVIsA 186 (269)
.++.+.+++||+|.+-
T Consensus 202 ~~g~i~~~~d~~~av~~aDvvy~d 225 (311)
T PRK14804 202 KKGTLSWEMNLHKAVSHADYVYTD 225 (311)
T ss_pred hcCCeEEEeCHHHHhCCCCEEEee
Confidence 3556788999999973
No 135
>PRK13814 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=97.14 E-value=0.013 Score=54.27 Aligned_cols=141 Identities=9% Similarity=0.035 Sum_probs=94.5
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC----CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCcccccccccccee
Q 024306 28 NKIKACEEVGIKSIVTEFADGC----TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNI 103 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~----~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~ 103 (269)
+-..++.++|..+.+. +... ..|.+.+.++-|+. -.+++|.+-.|-.. ....+.+.+ ..+-.+|.
T Consensus 62 SFe~A~~~LGg~~~~~--~~~~s~~~kgEsl~Dtarvls~-y~~D~iv~R~~~~~--~~~~~a~~~------~~vPvINa 130 (310)
T PRK13814 62 SFEIAAKRLGAMVLNP--NLKISAISKGETLFDTIKTLEA-MGVYFFIVRHSENE--TPEQIAKQL------SSGVVINA 130 (310)
T ss_pred HHHHHHHHhCCeEEEC--CCccccCCCCCCHHHHHHHHHH-hCCCEEEEeCCchh--HHHHHHHhC------CCCCeEEC
Confidence 3556888999977764 3221 13567777777776 34678888766332 223332322 11334564
Q ss_pred cccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhCCC-EEEEEeCC-----------
Q 024306 104 GNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHA-TVSIVHAL----------- 169 (269)
Q Consensus 104 g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~g--g~vg~~~a~~L~~~ga-~Vti~~~~----------- 169 (269)
| .++.+.||=+.+=+--++++-.+++|.+|+++|-+ +.|.+.++..++..|. +|++++..
T Consensus 131 g------~g~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGD~~~~rv~~Sl~~~~a~~g~~~v~~~~P~~~~p~~~~~~~ 204 (310)
T PRK13814 131 G------DGNHQHPSQALIDLMTIKQHKPHWNKLCVTIIGDIRHSRVANSLMDGLVTMGVPEIRLVGPSSLLPDKVGNDS 204 (310)
T ss_pred C------cCCCCCchHHHHHHHHHHHHhCCcCCcEEEEECCCCCCcHHHHHHHHHHHcCCCEEEEeCCcccCcCccccce
Confidence 2 24456799888844444444446999999999986 4569999999999998 89998643
Q ss_pred ---CCCHhhhcCCCCEEEe
Q 024306 170 ---TKNPEQITSEADIVIA 185 (269)
Q Consensus 170 ---t~~l~~~~~~aDiVIs 185 (269)
+.++.+++++||+|.+
T Consensus 205 ~~~~~d~~ea~~~aDvvy~ 223 (310)
T PRK13814 205 IKKFTELKPSLLNSDVIVT 223 (310)
T ss_pred EEEEcCHHHHhCCCCEEEE
Confidence 2466789999999986
No 136
>PRK07589 ornithine cyclodeaminase; Validated
Probab=97.13 E-value=0.0014 Score=61.65 Aligned_cols=75 Identities=13% Similarity=0.208 Sum_probs=57.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHh-CCC-EEEEEeCCC--------------------CCHhhhcCCCCEEEeccCCCC-
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQR-HHA-TVSIVHALT--------------------KNPEQITSEADIVIAAAGVAN- 191 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~-~ga-~Vti~~~~t--------------------~~l~~~~~~aDiVIsAtg~p~- 191 (269)
.-+++.|||+|.- |+.-++.+.. +.. +|++.+|+. .+.++.+++||||+++|+...
T Consensus 128 da~~l~iiGaG~Q-A~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~ 206 (346)
T PRK07589 128 DSRTMALIGNGAQ-SEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTN 206 (346)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCC
Confidence 4578999999886 8777665543 333 699987762 346788999999999998543
Q ss_pred --cccCCCcCCCcEEEEeeec
Q 024306 192 --LVRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 192 --~i~~~~~~~g~vViDv~~~ 210 (269)
+++.+|+++|+.|.=+|.+
T Consensus 207 ~Pvl~~~~lkpG~hV~aIGs~ 227 (346)
T PRK07589 207 ATILTDDMVEPGMHINAVGGD 227 (346)
T ss_pred CceecHHHcCCCcEEEecCCC
Confidence 4899999999999888854
No 137
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=97.11 E-value=0.0012 Score=60.29 Aligned_cols=73 Identities=26% Similarity=0.347 Sum_probs=56.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------CH-hhhcCCCCEEEeccCCCC---cc
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------NP-EQITSEADIVIAAAGVAN---LV 193 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------------~l-~~~~~~aDiVIsAtg~p~---~i 193 (269)
-++|+|+|.|.+ |+.++..|..+|..|.++.+... +. .+....||+||-|+|... ++
T Consensus 3 ~~~v~IvG~Gli-G~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l 81 (279)
T COG0287 3 SMKVGIVGLGLM-GGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVL 81 (279)
T ss_pred CcEEEEECCchH-HHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHH
Confidence 367999999886 99999999999998888865421 22 566778999999999533 22
Q ss_pred ---cCCCcCCCcEEEEeeec
Q 024306 194 ---RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 194 ---~~~~~~~g~vViDv~~~ 210 (269)
.+ .+++|++|.|++..
T Consensus 82 ~~l~~-~l~~g~iv~Dv~S~ 100 (279)
T COG0287 82 KELAP-HLKKGAIVTDVGSV 100 (279)
T ss_pred HHhcc-cCCCCCEEEecccc
Confidence 22 68899999999964
No 138
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=97.09 E-value=0.00095 Score=56.05 Aligned_cols=54 Identities=22% Similarity=0.254 Sum_probs=43.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------CHhhhcCCCCEEEeccC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NPEQITSEADIVIAAAG 188 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------~l~~~~~~aDiVIsAtg 188 (269)
|++|+|.|||.|.- |++-|..|.+.|.+|++..|..+ +..+.++.||+|+..++
T Consensus 2 l~~k~IAViGyGsQ-G~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~P 69 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQ-GHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLP 69 (165)
T ss_dssp HCTSEEEEES-SHH-HHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-
T ss_pred cCCCEEEEECCChH-HHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCC
Confidence 58999999999987 99999999999999999987642 46789999999999998
No 139
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.09 E-value=0.00083 Score=58.63 Aligned_cols=73 Identities=27% Similarity=0.347 Sum_probs=56.8
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------CHhhhcCCCCEEEeccCCCCc--cc---
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------NPEQITSEADIVIAAAGVANL--VR--- 194 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------~l~~~~~~aDiVIsAtg~p~~--i~--- 194 (269)
+++.|+|+|.. |.+++..|.+.|.+|++.+|+.+ +..++.+.||+||-|++.+.. +-
T Consensus 2 ~~~~i~GtGni-G~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~~~l 80 (211)
T COG2085 2 MIIAIIGTGNI-GSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVLAEL 80 (211)
T ss_pred cEEEEeccChH-HHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHHHHH
Confidence 46899999997 99999999999999999977642 345788999999999996442 11
Q ss_pred CCCcCCCcEEEEeeecCC
Q 024306 195 GSWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 195 ~~~~~~g~vViDv~~~~~ 212 (269)
.+++. |.+|||+. ||.
T Consensus 81 ~~~~~-~KIvID~t-np~ 96 (211)
T COG2085 81 RDALG-GKIVIDAT-NPI 96 (211)
T ss_pred HHHhC-CeEEEecC-CCc
Confidence 22233 89999987 554
No 140
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.09 E-value=0.0012 Score=60.12 Aligned_cols=72 Identities=19% Similarity=0.309 Sum_probs=55.6
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----c-ccC---
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----L-VRG--- 195 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~-i~~--- 195 (269)
+|.|||.|.+ |.+++..|.+.|.+|++++++. .+..+.++++|+||.+++... . +..
T Consensus 1 ~IgvIG~G~m-G~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~ 79 (291)
T TIGR01505 1 KVGFIGLGIM-GSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGI 79 (291)
T ss_pred CEEEEEecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchH
Confidence 4889999887 9999999999999999998762 245677899999999998532 1 221
Q ss_pred -CCcCCCcEEEEeeec
Q 024306 196 -SWLKPGAVVLDVGTC 210 (269)
Q Consensus 196 -~~~~~g~vViDv~~~ 210 (269)
..++++++++|++..
T Consensus 80 ~~~~~~g~iivd~st~ 95 (291)
T TIGR01505 80 IEGAKPGKTLVDMSSI 95 (291)
T ss_pred hhcCCCCCEEEECCCC
Confidence 235788999997643
No 141
>PLN02712 arogenate dehydrogenase
Probab=97.08 E-value=0.0012 Score=67.21 Aligned_cols=80 Identities=11% Similarity=0.171 Sum_probs=60.0
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------CHhhhcC-CCCEEEeccCCCC---c
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITS-EADIVIAAAGVAN---L 192 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------~l~~~~~-~aDiVIsAtg~p~---~ 192 (269)
.+.++++++|.|||.|.+ |..++..|.+.|.+|+++++... ++.+.+. ++|+||.+++... .
T Consensus 363 ~~~~~~~~kIgIIGlG~m-G~slA~~L~~~G~~V~~~dr~~~~~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~v 441 (667)
T PLN02712 363 CVNDGSKLKIAIVGFGNF-GQFLAKTMVKQGHTVLAYSRSDYSDEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEKV 441 (667)
T ss_pred ccCCCCCCEEEEEecCHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHHH
Confidence 345678999999999886 99999999999999999887632 2333344 5899999998422 2
Q ss_pred cc---CCCcCCCcEEEEeeec
Q 024306 193 VR---GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 193 i~---~~~~~~g~vViDv~~~ 210 (269)
+. ...++++++|+|++..
T Consensus 442 i~~l~~~~lk~g~ivvDv~Sv 462 (667)
T PLN02712 442 LKSLPFQRLKRSTLFVDVLSV 462 (667)
T ss_pred HHHHHHhcCCCCcEEEECCCc
Confidence 22 2246889999999754
No 142
>PRK13529 malate dehydrogenase; Provisional
Probab=97.06 E-value=0.003 Score=62.53 Aligned_cols=93 Identities=13% Similarity=0.203 Sum_probs=74.8
Q ss_pred CCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh----CCC-------EEEEEeCC-----------------
Q 024306 118 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHAL----------------- 169 (269)
Q Consensus 118 ~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~----~ga-------~Vti~~~~----------------- 169 (269)
.+-.|++..++-.+.++++.+++++|+|.+ |..+|.+|.. +|. .+++++++
T Consensus 277 V~LAgll~A~r~~g~~l~d~riv~~GAGsA-giGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~f 355 (563)
T PRK13529 277 VTLAGLLAALKITGEPLSDQRIVFLGAGSA-GCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPY 355 (563)
T ss_pred HHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHH
Confidence 355788999999999999999999999998 9999999876 576 58888654
Q ss_pred ---C------------CCHhhhcCCC--CEEEeccCCCCcccCCCcCC------CcEEEEeeecCC
Q 024306 170 ---T------------KNPEQITSEA--DIVIAAAGVANLVRGSWLKP------GAVVLDVGTCPV 212 (269)
Q Consensus 170 ---t------------~~l~~~~~~a--DiVIsAtg~p~~i~~~~~~~------g~vViDv~~~~~ 212 (269)
+ .+|.+.++.+ |++|-..+.|+.|++++++. .-+|+=++ ||.
T Consensus 356 a~~~~~~~~~~~~~~~~~L~e~v~~~kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt 420 (563)
T PRK13529 356 ARKREELADWDTEGDVISLLEVVRNVKPTVLIGVSGQPGAFTEEIVKEMAAHCERPIIFPLS-NPT 420 (563)
T ss_pred hhhcccccccccccCCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CcC
Confidence 0 2567888888 99999888888899888753 45777666 553
No 143
>PLN02256 arogenate dehydrogenase
Probab=97.06 E-value=0.0017 Score=59.91 Aligned_cols=82 Identities=17% Similarity=0.204 Sum_probs=59.8
Q ss_pred HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------CHhhhc-CCCCEEEeccCCC--
Q 024306 127 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQIT-SEADIVIAAAGVA-- 190 (269)
Q Consensus 127 l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------~l~~~~-~~aDiVIsAtg~p-- 190 (269)
|++.--+-++++|.|||.|.+ |..++..|.+.|.+|+++++... +..+.+ .++|+||-+++..
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~m-G~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~ 105 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNF-GQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSFFRDPDDFCEEHPDVVLLCTSILST 105 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECccHHHHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHH
Confidence 444444557889999999886 99999999999988988876531 233344 4699999999842
Q ss_pred -Cccc---CCCcCCCcEEEEeee
Q 024306 191 -NLVR---GSWLKPGAVVLDVGT 209 (269)
Q Consensus 191 -~~i~---~~~~~~g~vViDv~~ 209 (269)
..+. ...++++++|+|++.
T Consensus 106 ~~vl~~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 106 EAVLRSLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred HHHHHhhhhhccCCCCEEEecCC
Confidence 2222 234678999999997
No 144
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.05 E-value=0.0024 Score=62.07 Aligned_cols=43 Identities=23% Similarity=0.183 Sum_probs=38.2
Q ss_pred HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 127 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 127 l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
|...+.++++++|+|+|.|++ |..+|..|.++|++|+++++..
T Consensus 7 ~~~~~~~~~~~~v~viG~G~~-G~~~A~~L~~~G~~V~~~d~~~ 49 (480)
T PRK01438 7 LTSWHSDWQGLRVVVAGLGVS-GFAAADALLELGARVTVVDDGD 49 (480)
T ss_pred hhhcccCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCc
Confidence 566778889999999999997 9999999999999999998653
No 145
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.03 E-value=0.0017 Score=59.08 Aligned_cols=74 Identities=19% Similarity=0.287 Sum_probs=57.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----cc-cC--
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-RG-- 195 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i-~~-- 195 (269)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .+..+.++++|+||.+++.+. .+ ..
T Consensus 3 ~~IgviG~G~m-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~ 81 (296)
T PRK11559 3 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENG 81 (296)
T ss_pred ceEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcch
Confidence 47999999887 9999999999999999998752 345667889999999998422 22 11
Q ss_pred --CCcCCCcEEEEeeecC
Q 024306 196 --SWLKPGAVVLDVGTCP 211 (269)
Q Consensus 196 --~~~~~g~vViDv~~~~ 211 (269)
..++++.+++|++...
T Consensus 82 ~~~~~~~g~iiid~st~~ 99 (296)
T PRK11559 82 IIEGAKPGTVVIDMSSIA 99 (296)
T ss_pred HhhcCCCCcEEEECCCCC
Confidence 2457899999987553
No 146
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=97.02 E-value=0.013 Score=54.82 Aligned_cols=141 Identities=11% Similarity=0.051 Sum_probs=95.7
Q ss_pred HHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~--~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..++.++|.++.++.-... ...|.+.+.++-|+.- +|+|.+--|-.. ...++.+.. . +-.+|.+
T Consensus 63 SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y--~D~iv~R~~~~~--~~~~~a~~~----~---vPVINa~- 130 (334)
T PRK01713 63 AFEVAAYDQGAQVTYIDPNSSQIGHKESMKDTARVLGRM--YDAIEYRGFKQS--IVNELAEYA----G---VPVFNGL- 130 (334)
T ss_pred HHHHHHHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHh--CCEEEEEcCchH--HHHHHHHhC----C---CCEEECC-
Confidence 456688999999887632110 1236688888888873 889999876322 122222221 1 3344541
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCCC-------------
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHALT------------- 170 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~t------------- 170 (269)
.+...||=+.+ ++.+.++.+.+++|++|+++|-+ ..|.+.++.+++..|++|+++....
T Consensus 131 ------~~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~ 204 (334)
T PRK01713 131 ------TDEFHPTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPEASLVEMCEK 204 (334)
T ss_pred ------CCCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHH
Confidence 23456887777 45555656657999999999986 4479999999999999999986431
Q ss_pred ------------CCHhhhcCCCCEEEec
Q 024306 171 ------------KNPEQITSEADIVIAA 186 (269)
Q Consensus 171 ------------~~l~~~~~~aDiVIsA 186 (269)
.++.+.+++||+|.+-
T Consensus 205 ~~~~~g~~~~~~~d~~~a~~~aDvVyt~ 232 (334)
T PRK01713 205 FAKESGARITVTDDIDKAVKGVDFVHTD 232 (334)
T ss_pred HHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 3566789999999974
No 147
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=97.01 E-value=0.018 Score=53.91 Aligned_cols=141 Identities=9% Similarity=-0.064 Sum_probs=95.2
Q ss_pred HHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~--~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..+++++|.++.+..-... ...|.+.+.++-|+.- +|+|.+-.|-.. ....+.+.. .+-.+|.+
T Consensus 62 SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~y--~D~iviR~~~~~--~~~~~a~~s-------~vPVINa~- 129 (332)
T PRK04284 62 AFEVAAYDQGAHVTYLGPTGSQMGKKESTKDTARVLGGM--YDGIEYRGFSQR--TVETLAEYS-------GVPVWNGL- 129 (332)
T ss_pred HHHHHHHHcCCeEEEcCCccccCCCCcCHHHHHHHHHHh--CCEEEEecCchH--HHHHHHHhC-------CCCEEECC-
Confidence 456788999999886532211 0146788888888873 889999876332 222232221 13345632
Q ss_pred cccCCCCCccccCCHHHHHHHHHHh-CCCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC--------------
Q 024306 106 LAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL-------------- 169 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g~~~~l~~~-~~~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~-------------- 169 (269)
.+...||=+.+=+--+.++ ...++|++|+++|-+ ..|.+.++.++...|++|++++..
T Consensus 130 ------~~~~HPtQaL~Dl~Ti~e~~~g~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~ 203 (332)
T PRK04284 130 ------TDEDHPTQVLADFLTAKEHLKKPYKDIKFTYVGDGRNNVANALMQGAAIMGMDFHLVCPKELNPDDELLNKCKE 203 (332)
T ss_pred ------CCCCChHHHHHHHHHHHHHhcCCcCCcEEEEecCCCcchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHH
Confidence 2345688877744444444 347999999999985 346999999999999999999643
Q ss_pred -----------CCCHhhhcCCCCEEEec
Q 024306 170 -----------TKNPEQITSEADIVIAA 186 (269)
Q Consensus 170 -----------t~~l~~~~~~aDiVIsA 186 (269)
+.++.+++++||+|.+-
T Consensus 204 ~~~~~g~~~~~~~d~~ea~~~aDvvy~~ 231 (332)
T PRK04284 204 IAAETGGKITITDDIDEGVKGSDVIYTD 231 (332)
T ss_pred HHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 13556789999999975
No 148
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=97.00 E-value=0.017 Score=54.08 Aligned_cols=141 Identities=11% Similarity=0.004 Sum_probs=96.0
Q ss_pred HHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~--~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..++.++|..+.+..-... ...|.+.+.++-|+.- +|+|.+-.|-.. ...++.+.. .+-.+|.+
T Consensus 62 SFe~A~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~~~~--~~~~~a~~~-------~vPVINa~- 129 (336)
T PRK03515 62 SFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM--YDGIQYRGYGQE--IVETLAEYA-------GVPVWNGL- 129 (336)
T ss_pred HHHHHHHHcCCcEEEeCCccccCCCCCCHHHHHHHHHHh--CcEEEEEeCChH--HHHHHHHhC-------CCCEEECC-
Confidence 456788999999988642110 1236788888888873 889999877332 222332221 12234531
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhC-CCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC-------------
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSG-VEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL------------- 169 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~-~~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~------------- 169 (269)
.+...||=+.+ +..+.++.+ .+++|.+++.+|-+ ..|.+.++.+++..|+++++++..
T Consensus 130 ------~~~~HPtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~ 203 (336)
T PRK03515 130 ------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRLVAPKACWPEAALVTECR 203 (336)
T ss_pred ------CCCCChHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEEECCchhcCcHHHHHHHH
Confidence 23466988877 455555554 37999999999975 346999999999999999998643
Q ss_pred ------------CCCHhhhcCCCCEEEec
Q 024306 170 ------------TKNPEQITSEADIVIAA 186 (269)
Q Consensus 170 ------------t~~l~~~~~~aDiVIsA 186 (269)
+.++.+.+++||+|.+.
T Consensus 204 ~~~~~~g~~i~~~~d~~ea~~~aDvvytd 232 (336)
T PRK03515 204 ALAQKNGGNITLTEDIAEGVKGADFIYTD 232 (336)
T ss_pred HHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 13566789999999975
No 149
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.97 E-value=0.001 Score=58.26 Aligned_cols=116 Identities=22% Similarity=0.296 Sum_probs=70.8
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-C-----------------CHhhhcCCCCEEEeccCCCCc-
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-K-----------------NPEQITSEADIVIAAAGVANL- 192 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-~-----------------~l~~~~~~aDiVIsAtg~p~~- 192 (269)
.+++||+|+|+|.|.. |.-=+..|.+.||+|++..... + -..+.+..+++||.||+-+.+
T Consensus 8 ~~l~~k~VlvvGgG~v-a~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~ln 86 (210)
T COG1648 8 LDLEGKKVLVVGGGSV-ALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEELN 86 (210)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHHH
Confidence 4689999999999886 9888999999999999985442 1 112445669999999986542
Q ss_pred --ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHh---hHcceecccCCcccHHHHHHHHHHHHHHH
Q 024306 193 --VRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAM---RLASVITPVPGGVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 193 --i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~---~~~~~~tpvpgGvGp~T~~mLl~n~v~a~ 262 (269)
+.... ++-.+.+.+.-.|.. +|+-+.+.- +..-+++ -||-+|+.+.||.++....+
T Consensus 87 ~~i~~~a-~~~~i~vNv~D~p~~-----------~~f~~Pa~~~r~~l~iaIs--T~G~sP~la~~ir~~Ie~~l 147 (210)
T COG1648 87 ERIAKAA-RERRILVNVVDDPEL-----------CDFIFPAIVDRGPLQIAIS--TGGKSPVLARLLREKIEALL 147 (210)
T ss_pred HHHHHHH-HHhCCceeccCCccc-----------CceecceeeccCCeEEEEE--CCCCChHHHHHHHHHHHHHc
Confidence 11111 111233333333321 122222211 1233444 58888888888887765544
No 150
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.96 E-value=0.0016 Score=59.66 Aligned_cols=74 Identities=20% Similarity=0.291 Sum_probs=57.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----ccc-CC-
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVR-GS- 196 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i~-~~- 196 (269)
++|.|||.|.+ |.+++..|++.|.+|++++++. .+..+.++++|+||.+++.+. .+. .+
T Consensus 2 ~~Ig~IGlG~m-G~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~ 80 (296)
T PRK15461 2 AAIAFIGLGQM-GSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENG 80 (296)
T ss_pred CeEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCccc
Confidence 37999999987 9999999999999999998762 245567889999999998542 121 11
Q ss_pred ---CcCCCcEEEEeeecC
Q 024306 197 ---WLKPGAVVLDVGTCP 211 (269)
Q Consensus 197 ---~~~~g~vViDv~~~~ 211 (269)
.++++.++||++...
T Consensus 81 i~~~l~~g~lvid~sT~~ 98 (296)
T PRK15461 81 VCEGLSRDALVIDMSTIH 98 (296)
T ss_pred HhhcCCCCCEEEECCCCC
Confidence 256789999988654
No 151
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=96.95 E-value=0.024 Score=52.34 Aligned_cols=141 Identities=13% Similarity=0.142 Sum_probs=96.5
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|.++.++.-+.+. ..|.+.+..+-|+.- +|+|.+-.|-. -...++.+.. .+-.+|.|
T Consensus 56 SFe~A~~~LGg~~i~l~~~~~s~~~kgEsi~Dta~vls~y--~D~iviR~~~~--~~~~~~a~~s-------~vPVINa~ 124 (301)
T TIGR00670 56 SFETAMKRLGGDVVNFSDSETSSVAKGETLADTIKTLSGY--SDAIVIRHPLE--GAARLAAEVS-------EVPVINAG 124 (301)
T ss_pred HHHHHHHHcCCcEEEcCCCCcccCCCCcCHHHHHHHHHHh--CCEEEEECCch--hHHHHHHhhC-------CCCEEeCC
Confidence 4567899999988877541211 235677777777773 88999987633 2223333322 23345642
Q ss_pred ccccCCCCCccccCCHHHH-HHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhCCCEEEEEeCCC-----------
Q 024306 105 NLAMRGREPLFIPCTPKGC-IELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHALT----------- 170 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g~-~~~l~~~~~~l~gk~v~ViG~g--g~vg~~~a~~L~~~ga~Vti~~~~t----------- 170 (269)
. ...+.||=+.+= ..+.++.+ +++|++|+++|-+ +.|.+.++.+++..|++|++++...
T Consensus 125 ~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~~~~~~~~~~~ 197 (301)
T TIGR00670 125 D------GSNQHPTQTLLDLYTIYEEFG-RLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEELRMPKEILEEL 197 (301)
T ss_pred C------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHH
Confidence 1 123568888884 44444554 7999999999997 5679999999999999999996442
Q ss_pred ----------CCHhhhcCCCCEEEec
Q 024306 171 ----------KNPEQITSEADIVIAA 186 (269)
Q Consensus 171 ----------~~l~~~~~~aDiVIsA 186 (269)
.++.+++++||+|.+-
T Consensus 198 ~~~G~~v~~~~d~~~a~~~aDvvyt~ 223 (301)
T TIGR00670 198 KAKGIKVRETESLEEVIDEADVLYVT 223 (301)
T ss_pred HHcCCEEEEECCHHHHhCCCCEEEEC
Confidence 3556788999999874
No 152
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.95 E-value=0.0057 Score=58.57 Aligned_cols=95 Identities=23% Similarity=0.294 Sum_probs=65.0
Q ss_pred cCCHHHHHHHHHHhC--CCCccceEEEEcC----------------CcccHHHHHHHHHhCCCEEEEEeCCCC-------
Q 024306 117 PCTPKGCIELLIRSG--VEIMGKNAVVIGR----------------SNIVGLPTSLLLQRHHATVSIVHALTK------- 171 (269)
Q Consensus 117 p~t~~g~~~~l~~~~--~~l~gk~v~ViG~----------------gg~vg~~~a~~L~~~ga~Vti~~~~t~------- 171 (269)
.++++-++..+++.- .+++||+++|.|+ +|-+|+++|..|..+||+|+++++...
T Consensus 167 ~~~~~~I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~ 246 (399)
T PRK05579 167 MAEPEEIVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGV 246 (399)
T ss_pred CCCHHHHHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCc
Confidence 346666666665432 5689999999998 675699999999999999998875421
Q ss_pred ---------CH----hhhcCCCCEEEeccCCCCcc----cCCCcCCC--cEEEEeeecC
Q 024306 172 ---------NP----EQITSEADIVIAAAGVANLV----RGSWLKPG--AVVLDVGTCP 211 (269)
Q Consensus 172 ---------~l----~~~~~~aDiVIsAtg~p~~i----~~~~~~~g--~vViDv~~~~ 211 (269)
++ .+.....|++|++.+...+- ...-++++ ...+.+.-+|
T Consensus 247 ~~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~p 305 (399)
T PRK05579 247 KRIDVESAQEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNP 305 (399)
T ss_pred EEEccCCHHHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCc
Confidence 11 23346789999988854431 22234443 3567777766
No 153
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.92 E-value=0.023 Score=52.57 Aligned_cols=144 Identities=13% Similarity=0.205 Sum_probs=96.4
Q ss_pred HHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 27 RNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 27 ~~~~~~~~~~Gi~~~~~~~~~~--~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
-+-..++.++|.++.++.-... ...|.+.+.++-|+. -++|+|.+-.|-.. ...++.+. -.+-.+|.|
T Consensus 61 ~SFe~A~~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~-y~~D~iv~R~~~~~--~~~~~a~~-------~~vPVINa~ 130 (305)
T PRK00856 61 LSFELAAKRLGADVINFSASTSSVSKGETLADTIRTLSA-MGADAIVIRHPQSG--AARLLAES-------SDVPVINAG 130 (305)
T ss_pred HHHHHHHHHcCCcEEEeCCCcccCCCCcCHHHHHHHHHh-cCCCEEEEeCCChH--HHHHHHHH-------CCCCEEECC
Confidence 3456788999998877643210 113456677777766 35788988876332 22222222 123345642
Q ss_pred ccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhCCCEEEEEeCC------------
Q 024306 105 NLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL------------ 169 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~g--g~vg~~~a~~L~~~ga~Vti~~~~------------ 169 (269)
. .+...||=+.+ +..+.++.| +++|++|+++|-+ +.|.+.++.+++..|+++++++..
T Consensus 131 ~------g~~~HPtQ~LaDl~Ti~e~~G-~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~~~~~~~~~~~~ 203 (305)
T PRK00856 131 D------GSHQHPTQALLDLLTIREEFG-RLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTLLPEGMPEYGV 203 (305)
T ss_pred C------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCcccCcccccceEE
Confidence 1 13456888887 555555554 6999999999986 456999999999999999999643
Q ss_pred CCCHhhhcCCCCEEEecc
Q 024306 170 TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+++++||+|.+..
T Consensus 204 ~~d~~ea~~~aDvvyt~~ 221 (305)
T PRK00856 204 HTDLDEVIEDADVVMMLR 221 (305)
T ss_pred ECCHHHHhCCCCEEEECC
Confidence 245678999999999754
No 154
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=96.89 E-value=0.0033 Score=62.44 Aligned_cols=93 Identities=13% Similarity=0.228 Sum_probs=75.4
Q ss_pred CCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh-----CCC-------EEEEEeCC----------------
Q 024306 118 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR-----HHA-------TVSIVHAL---------------- 169 (269)
Q Consensus 118 ~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~-----~ga-------~Vti~~~~---------------- 169 (269)
++-.|++..++-.+.++++.+++++|+|.+ |..++.+|.. .|. ++++++++
T Consensus 303 V~lAgll~A~r~~g~~l~d~riv~~GAGsA-gigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l~~~k~ 381 (581)
T PLN03129 303 VALAGLLAALRATGGDLADQRILFAGAGEA-GTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQPFKK 381 (581)
T ss_pred HHHHHHHHHHHHhCCchhhceEEEECCCHH-HHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccChHHHH
Confidence 355778899999999999999999999998 9999998876 365 58888654
Q ss_pred --------CCCHhhhcCC--CCEEEeccCCCCcccCCCcC------CCcEEEEeeecCC
Q 024306 170 --------TKNPEQITSE--ADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV 212 (269)
Q Consensus 170 --------t~~l~~~~~~--aDiVIsAtg~p~~i~~~~~~------~g~vViDv~~~~~ 212 (269)
..+|.+.++. +|++|-+++.++.|++++++ +.-+|+=++ ||.
T Consensus 382 ~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~~rPIIFaLS-NPt 439 (581)
T PLN03129 382 PFAHDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEVLEAMASLNERPIIFALS-NPT 439 (581)
T ss_pred HHHhhcccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 1257788888 89999999888889999876 456777776 554
No 155
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.88 E-value=0.002 Score=59.12 Aligned_cols=73 Identities=26% Similarity=0.347 Sum_probs=55.7
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC----------------CCHhhhcCCCCEEEeccCCCC---ccc
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVR 194 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t----------------~~l~~~~~~aDiVIsAtg~p~---~i~ 194 (269)
-++|.|||.|.+ |..++..|.+.|. .|++++++. .+..+.++++|+||.+++... ++.
T Consensus 6 ~~~I~IIG~G~m-G~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~ 84 (307)
T PRK07502 6 FDRVALIGIGLI-GSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAA 84 (307)
T ss_pred CcEEEEEeeCHH-HHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHH
Confidence 368999999886 9999999998884 788887652 234566789999999998532 111
Q ss_pred --CCCcCCCcEEEEeee
Q 024306 195 --GSWLKPGAVVLDVGT 209 (269)
Q Consensus 195 --~~~~~~g~vViDv~~ 209 (269)
...++++.+|+|++.
T Consensus 85 ~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 85 EIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHhhCCCCCEEEeCcc
Confidence 235788999999985
No 156
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=96.88 E-value=0.023 Score=53.20 Aligned_cols=141 Identities=12% Similarity=0.056 Sum_probs=95.4
Q ss_pred HHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~--~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..+++++|..+.+...... ...|.+.+.++-|..- +|+|.+-.|-.. .+..+....+ +-.+|.|.
T Consensus 63 SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~rvls~y--~D~iviR~~~~~------~~~~~a~~~~---vPVINa~~ 131 (331)
T PRK02102 63 AFEVAAIDLGAHVTYLGPNDSQLGKKESIEDTARVLGRM--YDGIEYRGFKQE------IVEELAKYSG---VPVWNGLT 131 (331)
T ss_pred HHHHHHHHcCCCEEEcCcccccCCCCcCHHHHHHHHhhc--CCEEEEECCchH------HHHHHHHhCC---CCEEECCC
Confidence 456789999999986632110 1236688888888773 889999876332 2333322212 22445422
Q ss_pred cccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCCC--------------
Q 024306 106 LAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHALT-------------- 170 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~t-------------- 170 (269)
+...||=+.+=+--++++-..++|++++++|-+ ..|.+.++..+...|++|++++...
T Consensus 132 -------~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~ 204 (331)
T PRK02102 132 -------DEWHPTQMLADFMTMKEHFGPLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRICAPKELWPEEELVALAREI 204 (331)
T ss_pred -------CCCChHHHHHHHHHHHHHhCCCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHH
Confidence 245688888754445444457999999999996 3479999999999999999996431
Q ss_pred -----------CCHhhhcCCCCEEEec
Q 024306 171 -----------KNPEQITSEADIVIAA 186 (269)
Q Consensus 171 -----------~~l~~~~~~aDiVIsA 186 (269)
.++.+.+++||+|.+-
T Consensus 205 ~~~~g~~~~~~~d~~ea~~~aDvvyt~ 231 (331)
T PRK02102 205 AKETGAKITITEDPEEAVKGADVIYTD 231 (331)
T ss_pred HHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 3556889999999975
No 157
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.87 E-value=0.0026 Score=56.22 Aligned_cols=59 Identities=10% Similarity=0.135 Sum_probs=44.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-CCH-----------------hhhcCCCCEEEeccCCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP-----------------EQITSEADIVIAAAGVAN 191 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-~~l-----------------~~~~~~aDiVIsAtg~p~ 191 (269)
++++|++|+|||+|.+ |.-=+..|.+.||.|+|+...- +++ .+.+..+++||.||.-+.
T Consensus 21 l~~~~~~VLVVGGG~V-A~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~ 97 (223)
T PRK05562 21 LLSNKIKVLIIGGGKA-AFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEK 97 (223)
T ss_pred EECCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHH
Confidence 3567999999999886 7666778889999999995442 111 234678999999998643
No 158
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.85 E-value=0.0026 Score=52.03 Aligned_cols=53 Identities=26% Similarity=0.419 Sum_probs=43.5
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC------------------------CCHhhhcCCCCEEEeccCCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT------------------------KNPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t------------------------~~l~~~~~~aDiVIsAtg~p 190 (269)
||.|||++|.||..++..|..++. ++.++++.. .+..+.+++||+||.+.|.|
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 799999966679999999998884 688887651 23467889999999999865
No 159
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=96.84 E-value=0.026 Score=52.81 Aligned_cols=142 Identities=10% Similarity=0.002 Sum_probs=97.1
Q ss_pred HHHHHHHHcCCeEEEEEcCC--CCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFAD--GCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~--~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..++.++|.++.++.-.. -...|.+.+.++-|+.- +|+|.+-.|-.. .+..+....+ +-.+|.+
T Consensus 62 SFE~A~~~LGg~~i~l~~~~s~~~kgEsl~Dtarvls~y--~D~iviR~~~~~------~~~~~a~~~~---vPVINa~- 129 (334)
T PRK12562 62 SFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM--YDGIQYRGHGQE------VVETLAEYAG---VPVWNGL- 129 (334)
T ss_pred HHHHHHHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHh--CCEEEEECCchH------HHHHHHHhCC---CCEEECC-
Confidence 45678999999999874321 01246688888888873 899999876332 2333322212 3345642
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhCC-CCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCCC------------
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSGV-EIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHALT------------ 170 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~~-~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~t------------ 170 (269)
++...||=+.+ +..+.++.+. .++|.+++++|-+ ..|.+.++.+++..|++|+++....
T Consensus 130 ------~~~~HPtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~ 203 (334)
T PRK12562 130 ------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAECS 203 (334)
T ss_pred ------CCCCChHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHHHH
Confidence 23356887777 4455455553 5899999999985 3469999999999999999986432
Q ss_pred -------------CCHhhhcCCCCEEEecc
Q 024306 171 -------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 171 -------------~~l~~~~~~aDiVIsAt 187 (269)
.++.+.+++||+|.+-.
T Consensus 204 ~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 233 (334)
T PRK12562 204 ALAQKHGGKITLTEDIAAGVKGADFIYTDV 233 (334)
T ss_pred HHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 35667889999999754
No 160
>PLN02342 ornithine carbamoyltransferase
Probab=96.84 E-value=0.023 Score=53.44 Aligned_cols=141 Identities=14% Similarity=0.083 Sum_probs=97.4
Q ss_pred HHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~--~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..++.++|.++.++.-... ...|.+.+.++-|..- +|+|.+-.|-.. .+..+... -.+-.+|.+
T Consensus 102 SFE~A~~~LGg~~i~l~~~~ss~~kGESl~DTarvLs~y--~D~IviR~~~~~------~~~~la~~---~~vPVINA~- 169 (348)
T PLN02342 102 SFETGFFLLGGHALYLGPDDIQLGKREETRDIARVLSRY--NDIIMARVFAHQ------DVLDLAEY---SSVPVINGL- 169 (348)
T ss_pred HHHHHHHHcCCcEEEeCcccccCCCCcCHHHHHHHHHHh--CCEEEEeCCChH------HHHHHHHh---CCCCEEECC-
Confidence 356789999999988742221 0235688888888773 889999877332 22222221 123345642
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC---------------
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL--------------- 169 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~--------------- 169 (269)
.+.+.||=+.+ +..+.++.| +++|++|+++|-+..|.+.++..+...|++|++++..
T Consensus 170 ------~~~~HPtQaLaDl~Ti~e~~G-~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~ 242 (348)
T PLN02342 170 ------TDYNHPCQIMADALTIIEHIG-RLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYEPDAKTVEKARAA 242 (348)
T ss_pred ------CCCCChHHHHHHHHHHHHHhC-CcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHh
Confidence 22356887777 444445554 6999999999998888999999999999999999533
Q ss_pred -------CCCHhhhcCCCCEEEecc
Q 024306 170 -------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 -------t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+.+++||+|.+-+
T Consensus 243 g~~~~~~~~d~~eav~~aDVvy~~~ 267 (348)
T PLN02342 243 GISKIEITNDPAEAVKGADVVYTDV 267 (348)
T ss_pred CCCcEEEEcCHHHHhCCCCEEEECC
Confidence 235578899999999763
No 161
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.83 E-value=0.0023 Score=59.58 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=55.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCCC---CcccC-
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVA---NLVRG- 195 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~p---~~i~~- 195 (269)
.++||+|.|||.|.. |+++|..|...|.+|++.++.. .++.+.+++||+|+..++.+ +.+..
T Consensus 13 ~LkgKtVGIIG~GsI-G~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~e 91 (335)
T PRK13403 13 LLQGKTVAVIGYGSQ-GHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAE 91 (335)
T ss_pred hhCcCEEEEEeEcHH-HHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHH
Confidence 368999999999887 9999999999999999986542 15778899999999988843 23332
Q ss_pred --CCcCCCcEE
Q 024306 196 --SWLKPGAVV 204 (269)
Q Consensus 196 --~~~~~g~vV 204 (269)
..+++|+++
T Consensus 92 il~~MK~GaiL 102 (335)
T PRK13403 92 VEENLREGQML 102 (335)
T ss_pred HHhcCCCCCEE
Confidence 246777654
No 162
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=96.81 E-value=0.037 Score=51.91 Aligned_cols=141 Identities=10% Similarity=0.076 Sum_probs=96.7
Q ss_pred HHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~--~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..++.++|.++.++.-... ...|.+.+.++-|+.- +|+|.+-.+ .+-. +..+... -.+-.+|.+
T Consensus 59 SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dtarvls~y--~D~iviR~~--~~~~----~~~~a~~---~~vPVINa~- 126 (338)
T PRK02255 59 SFETAMTQLGGHAQYLAPGQIQLGGHESLEDTARVLSRL--VDIIMARVD--RHQT----VVELAKY---ATVPVINGM- 126 (338)
T ss_pred HHHHHHHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHh--CcEEEEecC--ChHH----HHHHHHh---CCCCEEECC-
Confidence 456789999999888753211 1236688888888873 888988776 3222 2222211 123345531
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhC--CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC-------------
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSG--VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL------------- 169 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~--~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~------------- 169 (269)
.+...||=+.+ +..+.++.+ .+++|++|+++|-+..|.+.++..+...|++|++|+..
T Consensus 127 ------~~~~HPtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~ 200 (338)
T PRK02255 127 ------SDYNHPTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDFVHFGPKGYQLPEEHLAIAE 200 (338)
T ss_pred ------CCCCChHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEEEEECCCccccCHHHHHHHH
Confidence 22356887777 455555554 36999999999998788999999999999999999643
Q ss_pred ------------CCCHhhhcCCCCEEEec
Q 024306 170 ------------TKNPEQITSEADIVIAA 186 (269)
Q Consensus 170 ------------t~~l~~~~~~aDiVIsA 186 (269)
+.++.+.+++||+|.+-
T Consensus 201 ~~~~~~g~~~~~~~d~~eav~~aDvvy~~ 229 (338)
T PRK02255 201 ENCEVSGGSVLVTDDVDEAVKDADFVYTD 229 (338)
T ss_pred HHHHhcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 14567889999999973
No 163
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=96.79 E-value=0.03 Score=51.74 Aligned_cols=140 Identities=16% Similarity=0.202 Sum_probs=96.2
Q ss_pred HHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~--~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..+++++|.++.++.-... ...|.+.+.+.-|+.- +|+|.+-.|-.. ....+.+.. .+-.+|.|.
T Consensus 56 SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y--~D~iv~R~~~~~--~~~~~a~~~-------~vPVINa~~ 124 (304)
T TIGR00658 56 SFEVAAYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRY--VDGIMARVYKHE--DVEELAKYA-------SVPVINGLT 124 (304)
T ss_pred HHHHHHHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHh--CCEEEEECCChH--HHHHHHHhC-------CCCEEECCC
Confidence 356788999999987743221 0236688888888873 889999877332 223332222 233456421
Q ss_pred cccCCCCCccccCCHHHH-HHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------
Q 024306 106 LAMRGREPLFIPCTPKGC-IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------- 170 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g~-~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------- 170 (269)
....||=+.+= ..+.++.+ .++|.+|+++|-...|.+.++.+|...|++|++++...
T Consensus 125 -------~~~HPtQaL~Dl~Ti~e~~g-~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~ 196 (304)
T TIGR00658 125 -------DLFHPCQALADLLTIIEHFG-KLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVATPEGYEPDADIVKKAQEI 196 (304)
T ss_pred -------CCCChHHHHHHHHHHHHHhC-CCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHH
Confidence 23568877774 44444544 59999999999977789999999999999999996331
Q ss_pred -----------CCHhhhcCCCCEEEec
Q 024306 171 -----------KNPEQITSEADIVIAA 186 (269)
Q Consensus 171 -----------~~l~~~~~~aDiVIsA 186 (269)
.++.+.+++||+|.+-
T Consensus 197 ~~~~g~~~~~~~d~~~a~~~aDvvy~~ 223 (304)
T TIGR00658 197 AKENGGSVELTHDPVEAVKGADVIYTD 223 (304)
T ss_pred HHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 3556789999999974
No 164
>PLN02527 aspartate carbamoyltransferase
Probab=96.77 E-value=0.038 Score=51.16 Aligned_cols=143 Identities=13% Similarity=0.112 Sum_probs=96.1
Q ss_pred HHHHHHHHHcCCeEEEEEcCC-CC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccce
Q 024306 27 RNKIKACEEVGIKSIVTEFAD-GC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLN 102 (269)
Q Consensus 27 ~~~~~~~~~~Gi~~~~~~~~~-~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n 102 (269)
-+-..++.++|.++.++.-.. +. ..|.+.+.++-|+.- +|+|.+-.|-.. ...++.+.. .+-.+|
T Consensus 55 ~SFe~A~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y--~D~iviR~~~~~--~~~~~a~~~-------~vPVIN 123 (306)
T PLN02527 55 LSFESAMKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGY--SDIIVLRHFESG--AARRAAATA-------EIPVIN 123 (306)
T ss_pred HHHHHHHHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHh--CcEEEEECCChh--HHHHHHHhC-------CCCEEE
Confidence 346678999999999886531 11 146678888888773 889999877433 223332221 133445
Q ss_pred ecccccCCCCCccccCCHHHH-HHHHHHhCCCCccceEEEEcCC-c-ccHHHHHHHHHhC-CCEEEEEeCC---------
Q 024306 103 IGNLAMRGREPLFIPCTPKGC-IELLIRSGVEIMGKNAVVIGRS-N-IVGLPTSLLLQRH-HATVSIVHAL--------- 169 (269)
Q Consensus 103 ~g~l~~g~~~~~~~p~t~~g~-~~~l~~~~~~l~gk~v~ViG~g-g-~vg~~~a~~L~~~-ga~Vti~~~~--------- 169 (269)
.|. .+...||=+.+= ..+.++.+ +++|++|+++|-+ . -+.+.++..|... |++|+++...
T Consensus 124 a~~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~ 196 (306)
T PLN02527 124 AGD------GPGQHPTQALLDVYTIQREIG-RLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVVKMKDDIK 196 (306)
T ss_pred CCC------CCCCChHHHHHHHHHHHHHhC-CcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCccCCCHHHH
Confidence 421 234569988884 44444454 6999999999976 2 2588888888877 8999998643
Q ss_pred ------------CCCHhhhcCCCCEEEecc
Q 024306 170 ------------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 ------------t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+.+++||+|.+..
T Consensus 197 ~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 226 (306)
T PLN02527 197 DYLTSKGVEWEESSDLMEVASKCDVLYQTR 226 (306)
T ss_pred HHHHHcCCEEEEEcCHHHHhCCCCEEEECC
Confidence 246678999999999843
No 165
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.76 E-value=0.0027 Score=59.82 Aligned_cols=73 Identities=27% Similarity=0.421 Sum_probs=54.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------------CCHhhhcCCCCEEEeccCCCC---cc--
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------KNPEQITSEADIVIAAAGVAN---LV-- 193 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------------~~l~~~~~~aDiVIsAtg~p~---~i-- 193 (269)
++|.|||.|.+ |.+++..|.+.|..|.+..+.. .++.+.+++||+||-|++... ++
T Consensus 1 ~~I~iIG~Gli-G~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl~~ 79 (359)
T PRK06545 1 RTVLIVGLGLI-GGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALLAE 79 (359)
T ss_pred CeEEEEEeCHH-HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHHHH
Confidence 47999999887 9999999999998777775432 233456789999999998432 22
Q ss_pred -cCCCcCCCcEEEEeeec
Q 024306 194 -RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 194 -~~~~~~~g~vViDv~~~ 210 (269)
.+..++++++|.|++..
T Consensus 80 l~~~~l~~~~ivtDv~Sv 97 (359)
T PRK06545 80 LADLELKPGVIVTDVGSV 97 (359)
T ss_pred HhhcCCCCCcEEEeCccc
Confidence 22136789999999865
No 166
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.75 E-value=0.0032 Score=57.95 Aligned_cols=53 Identities=21% Similarity=0.348 Sum_probs=42.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCCC------------------------CHhhhcCCCCEEEeccCCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK------------------------NPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t~------------------------~l~~~~~~aDiVIsAtg~p 190 (269)
++|.|||+|++ |++++..|+.+|. +|+++++... .-.+.+++||+||.++|.|
T Consensus 1 ~kI~IIGaG~v-G~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~ 79 (306)
T cd05291 1 RKVVIIGAGHV-GSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAP 79 (306)
T ss_pred CEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCC
Confidence 47999999886 9999999999993 7999976421 1124578999999999975
No 167
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.75 E-value=0.0015 Score=59.21 Aligned_cols=72 Identities=26% Similarity=0.237 Sum_probs=54.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---------------HhhhcCCCCEEEeccCCCC---ccc--CCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------PEQITSEADIVIAAAGVAN---LVR--GSW 197 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~---------------l~~~~~~aDiVIsAtg~p~---~i~--~~~ 197 (269)
+|.|||.|.+ |..++..|.+.|.+|++++++... ..+.+++||+||.|++... .+. ...
T Consensus 2 ~I~IIG~G~m-G~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~ 80 (279)
T PRK07417 2 KIGIVGLGLI-GGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPA 80 (279)
T ss_pred eEEEEeecHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHh
Confidence 6899999886 999999999999999999875311 1235788999999998422 121 124
Q ss_pred cCCCcEEEEeeec
Q 024306 198 LKPGAVVLDVGTC 210 (269)
Q Consensus 198 ~~~g~vViDv~~~ 210 (269)
++++++|.|++.-
T Consensus 81 l~~~~ii~d~~Sv 93 (279)
T PRK07417 81 LPPEAIVTDVGSV 93 (279)
T ss_pred CCCCcEEEeCcch
Confidence 5788999998854
No 168
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=96.72 E-value=0.029 Score=51.82 Aligned_cols=140 Identities=11% Similarity=0.078 Sum_probs=95.4
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|.++.++.- .+. .-|.+.+.++-|+.- +|+|.+-.|-.. .+..+.... .+-.+|.|
T Consensus 55 SFE~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dt~~vls~y--~D~iviR~~~~~------~~~~~a~~~---~vPVINa~ 122 (302)
T PRK14805 55 SFDIGINKLGGHCLYLDQ-QNGALGKRESVADFAANLSCW--ADAIVARVFSHS------TIEQLAEHG---SVPVINAL 122 (302)
T ss_pred HHHHHHHHcCCcEEECCC-CcCcCCCCcCHHHHHHHHHHh--CCEEEEeCCChh------HHHHHHHhC---CCCEEECC
Confidence 456789999999988642 111 236688888888873 899999876332 222222221 23445652
Q ss_pred ccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------
Q 024306 105 NLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------- 170 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------- 170 (269)
. +...||=+.+=+--+++...+++|++|+++|-+..|.+.++.+++..|++|++++...
T Consensus 123 ~-------~~~HPtQaL~Dl~Ti~e~~g~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~a~~~ 195 (302)
T PRK14805 123 C-------DLYHPCQALADFLTLAEQFGDVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPPGHFPDGQIVAEAQEL 195 (302)
T ss_pred C-------CCCChHHHHHHHHHHHHHhCCcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHH
Confidence 2 2356887777444444443479999999999988889999999999999999996432
Q ss_pred -----------CCHhhhcCCCCEEEecc
Q 024306 171 -----------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 171 -----------~~l~~~~~~aDiVIsAt 187 (269)
.++ +.+++||+|.+-+
T Consensus 196 ~~~~g~~~~~~~d~-~a~~~aDvvy~~~ 222 (302)
T PRK14805 196 AAKSGGKLVLTSDI-EAIEGHDAIYTDT 222 (302)
T ss_pred HHHcCCEEEEEcCH-HHHCCCCEEEeec
Confidence 232 4588999999744
No 169
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=96.68 E-value=0.011 Score=55.23 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=28.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEE
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIV 166 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~ 166 (269)
..++...|+|||+||. |-|++++|+..|+ ++=++
T Consensus 62 ~~Lk~s~VLVVGaGGL-GcPa~~YLaaaGvG~lGiV 96 (427)
T KOG2017|consen 62 LSLKNSSVLVVGAGGL-GCPAAQYLAAAGVGRLGIV 96 (427)
T ss_pred cccCCccEEEEccCCC-CCHHHHHHHHcCCCeeccc
Confidence 4578899999999997 9999999999886 45554
No 170
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=96.68 E-value=0.0061 Score=56.95 Aligned_cols=75 Identities=20% Similarity=0.344 Sum_probs=59.8
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhC-CC-EEEEEeCCC---------------------CCHhhhcCCCCEEEeccCCCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRH-HA-TVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~-ga-~Vti~~~~t---------------------~~l~~~~~~aDiVIsAtg~p~ 191 (269)
.-+.+.|||+|.- ++.-++.+... +. +|.|..|+. .+.++.+++|||||++|+...
T Consensus 129 da~~laiIGaG~q-A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~ 207 (330)
T COG2423 129 DASTLAIIGAGAQ-ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTE 207 (330)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCC
Confidence 3567999999886 88888877654 33 688887762 356788999999999999644
Q ss_pred -cccCCCcCCCcEEEEeeec
Q 024306 192 -LVRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 192 -~i~~~~~~~g~vViDv~~~ 210 (269)
+++.+|+++|+.|.=+|.+
T Consensus 208 Pil~~~~l~~G~hI~aiGad 227 (330)
T COG2423 208 PVLKAEWLKPGTHINAIGAD 227 (330)
T ss_pred CeecHhhcCCCcEEEecCCC
Confidence 5899999999999888854
No 171
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=96.68 E-value=0.037 Score=51.11 Aligned_cols=140 Identities=12% Similarity=0.117 Sum_probs=95.1
Q ss_pred HHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~--~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..+++++|.++.++.-... ...|.+.+.++-|+.- +|+|.+-.|-.. ....+.+. ..+-.+|.|.
T Consensus 60 SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~--~D~iv~R~~~~~--~~~~~a~~-------~~vPVINag~ 128 (304)
T PRK00779 60 SFEVGMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRY--VDAIMIRTFEHE--TLEELAEY-------STVPVINGLT 128 (304)
T ss_pred HHHHHHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHh--CCEEEEcCCChh--HHHHHHHh-------CCCCEEeCCC
Confidence 456799999999888753221 0135688888888773 788888776332 12222222 1234567542
Q ss_pred cccCCCCCccccCCHHHH-HHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------
Q 024306 106 LAMRGREPLFIPCTPKGC-IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------- 170 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g~-~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------- 170 (269)
....||=+.+= ..+.++. ..++|++|+++|-.+-|.+.++..|...|++|++++...
T Consensus 129 -------~~~HPtQaL~Dl~Ti~e~~-g~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~ 200 (304)
T PRK00779 129 -------DLSHPCQILADLLTIYEHR-GSLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEPDPEIVEKIAKE 200 (304)
T ss_pred -------CCCChHHHHHHHHHHHHHh-CCcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHH
Confidence 23458776664 3444444 469999999999966679999999999999999996432
Q ss_pred --------CCHhhhcCCCCEEEec
Q 024306 171 --------KNPEQITSEADIVIAA 186 (269)
Q Consensus 171 --------~~l~~~~~~aDiVIsA 186 (269)
.++.+.+++||+|.+-
T Consensus 201 ~g~~~~~~~d~~~a~~~aDvvy~~ 224 (304)
T PRK00779 201 TGASIEVTHDPKEAVKGADVVYTD 224 (304)
T ss_pred cCCeEEEEcCHHHHhCCCCEEEec
Confidence 3567888999999975
No 172
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.67 E-value=0.0029 Score=52.71 Aligned_cols=51 Identities=27% Similarity=0.296 Sum_probs=43.5
Q ss_pred EEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------CHhhhcCCCCEEEeccCC
Q 024306 139 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 139 v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------------~l~~~~~~aDiVIsAtg~ 189 (269)
|+|+|++|.+|+.++..|.++|.+|+.+.|+.. .+.+.++.+|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 789999888999999999999999999987632 235678899999999884
No 173
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.67 E-value=0.0033 Score=59.60 Aligned_cols=76 Identities=18% Similarity=0.230 Sum_probs=57.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhC-CCEEEEEeCCC---CCHhhhcCCCCEEEeccCCCC---ccc---C--CCcCCCc
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALT---KNPEQITSEADIVIAAAGVAN---LVR---G--SWLKPGA 202 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~-ga~Vti~~~~t---~~l~~~~~~aDiVIsAtg~p~---~i~---~--~~~~~g~ 202 (269)
.-.+|+|||.+|.+|..++..|.+. +.+|+.+.+.. .+..+.+++||+||-|++... ++. + ..+++++
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~~~~~~~~v~~aDlVilavPv~~~~~~l~~l~~~~~~l~~~~ 82 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPGSLDPATLLQRADVLIFSAPIRHTAALIEEYVALAGGRAAGQ 82 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccccCCHHHHhcCCCEEEEeCCHHHHHHHHHHHhhhhcCCCCCe
Confidence 4568999999444599999999875 67888887642 346678899999999999422 222 1 2378999
Q ss_pred EEEEeeec
Q 024306 203 VVLDVGTC 210 (269)
Q Consensus 203 vViDv~~~ 210 (269)
+|.|++..
T Consensus 83 iVtDVgSv 90 (370)
T PRK08818 83 LWLDVTSI 90 (370)
T ss_pred EEEECCCC
Confidence 99999964
No 174
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=96.67 E-value=0.048 Score=52.72 Aligned_cols=144 Identities=13% Similarity=0.033 Sum_probs=95.1
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|..+.++.=+.++ ..|.+.+...-|+.- +|+|.+-.|-.. ...++.+.. .+-.+|.|
T Consensus 143 SFE~A~~~LGg~~i~l~~~~~ss~~kGESi~DTarvLs~y--~D~IviR~~~~~--~~~e~A~~s-------~vPVINAg 211 (429)
T PRK11891 143 SFGAAFCRLGGSVCDTTGFTFSSMAKGESIYDTSRVMSGY--VDALVIRHPEQG--SVAEFARAT-------NLPVINGG 211 (429)
T ss_pred HHHHHHHHcCCeEEEeCCccccCCCCCCCHHHHHHHHHHh--CCEEEEeCCchh--HHHHHHHhC-------CCCEEECC
Confidence 4567889999999887421111 134577777777663 788888866332 223332221 23345642
Q ss_pred ccccCCCCCccccCCHHH-HHHHHHHhCC---CCccceEEEEcCC--cccHHHHHHHHHhC-CCEEEEEeCC--------
Q 024306 105 NLAMRGREPLFIPCTPKG-CIELLIRSGV---EIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL-------- 169 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g-~~~~l~~~~~---~l~gk~v~ViG~g--g~vg~~~a~~L~~~-ga~Vti~~~~-------- 169 (269)
+.+.+.||=+.+ ++.+.++.+. .++|++|+++|-+ +-+.+.++..++.. |++|++++..
T Consensus 212 ------dg~~~HPtQaLaDl~Ti~E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~~~~~~~ 285 (429)
T PRK11891 212 ------DGPGEHPSQALLDLYTIQREFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTLEMPAYI 285 (429)
T ss_pred ------CCCCCCcHHHHHHHHHHHHHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCccccCHHH
Confidence 124566998877 5555565542 4899999999996 44588888888776 9999998643
Q ss_pred -------------CCCHhhhcCCCCEEEeccC
Q 024306 170 -------------TKNPEQITSEADIVIAAAG 188 (269)
Q Consensus 170 -------------t~~l~~~~~~aDiVIsAtg 188 (269)
+.++.+++++||+|++..+
T Consensus 286 ~~~~~~~G~~v~~~~d~~eav~~ADVVYt~~~ 317 (429)
T PRK11891 286 VEQISRNGHVIEQTDDLAAGLRGADVVYATRI 317 (429)
T ss_pred HHHHHhcCCeEEEEcCHHHHhCCCCEEEEcCc
Confidence 2456788999999998553
No 175
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.64 E-value=0.0042 Score=57.99 Aligned_cols=70 Identities=21% Similarity=0.233 Sum_probs=53.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCC---CcccC-
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVA---NLVRG- 195 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p---~~i~~- 195 (269)
++||+|.|||.|.+ |++++..|...|.+|.+..+.. .+..+.+++||+|+.+++.. ..+..
T Consensus 15 L~gktIgIIG~Gsm-G~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~~ 93 (330)
T PRK05479 15 IKGKKVAIIGYGSQ-GHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEEE 93 (330)
T ss_pred hCCCEEEEEeeHHH-HHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHHH
Confidence 68999999999986 9999999999999988876541 24567789999999999832 12211
Q ss_pred --CCcCCCcEE
Q 024306 196 --SWLKPGAVV 204 (269)
Q Consensus 196 --~~~~~g~vV 204 (269)
..+++|++|
T Consensus 94 I~~~Lk~g~iL 104 (330)
T PRK05479 94 IEPNLKEGAAL 104 (330)
T ss_pred HHhcCCCCCEE
Confidence 235677665
No 176
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.64 E-value=0.0041 Score=59.85 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=33.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
++++|+|+|+|+|++ |+++|..|+++|++|+++.+..
T Consensus 2 ~~~~k~v~iiG~g~~-G~~~A~~l~~~G~~V~~~d~~~ 38 (450)
T PRK14106 2 ELKGKKVLVVGAGVS-GLALAKFLKKLGAKVILTDEKE 38 (450)
T ss_pred CcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999995 9999999999999999998763
No 177
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.64 E-value=0.002 Score=51.03 Aligned_cols=75 Identities=24% Similarity=0.262 Sum_probs=51.7
Q ss_pred eEEEEcCCcccHHHHHHHHHhCC-CE-EEEEeCCC---CCH-------------------hhhcCCCCEEEeccCCC--C
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHH-AT-VSIVHALT---KNP-------------------EQITSEADIVIAAAGVA--N 191 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~g-a~-Vti~~~~t---~~l-------------------~~~~~~aDiVIsAtg~p--~ 191 (269)
||.|+|+.|.+|+.++.+|.++- .+ +.++.++. +.+ .+.+.++|+||.|++.- .
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~~~ 80 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGASK 80 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHHHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhHHH
Confidence 68999988889999999998854 35 44554443 111 13468999999999841 1
Q ss_pred cccCCCcCCCcEEEEeeecCC
Q 024306 192 LVRGSWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 192 ~i~~~~~~~g~vViDv~~~~~ 212 (269)
-+-+..++.|..|||.+....
T Consensus 81 ~~~~~~~~~g~~ViD~s~~~R 101 (121)
T PF01118_consen 81 ELAPKLLKAGIKVIDLSGDFR 101 (121)
T ss_dssp HHHHHHHHTTSEEEESSSTTT
T ss_pred HHHHHHhhCCcEEEeCCHHHh
Confidence 233344788999999997653
No 178
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.61 E-value=0.0041 Score=60.18 Aligned_cols=71 Identities=21% Similarity=0.348 Sum_probs=54.1
Q ss_pred eEEEEc-CCcccHHHHHHHHHhCCCEEEEEeCCCC---------------CHhhhcCCCCEEEeccCCCC---ccc--CC
Q 024306 138 NAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQITSEADIVIAAAGVAN---LVR--GS 196 (269)
Q Consensus 138 ~v~ViG-~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------~l~~~~~~aDiVIsAtg~p~---~i~--~~ 196 (269)
+|.||| .|.+ |.+++..|.+.|.+|+++.++.. +..+.+.++|+||.+++... .+. ..
T Consensus 2 kI~IIGG~G~m-G~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl~~l~~ 80 (437)
T PRK08655 2 KISIIGGTGGL-GKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVIKEVAP 80 (437)
T ss_pred EEEEEecCCHH-HHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHHHHHHh
Confidence 689998 4664 99999999999999999877531 34456788999999998422 221 23
Q ss_pred CcCCCcEEEEeee
Q 024306 197 WLKPGAVVLDVGT 209 (269)
Q Consensus 197 ~~~~g~vViDv~~ 209 (269)
.++++++|+|++.
T Consensus 81 ~l~~~~iViDvsS 93 (437)
T PRK08655 81 HVKEGSLLMDVTS 93 (437)
T ss_pred hCCCCCEEEEccc
Confidence 4688999999995
No 179
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.60 E-value=0.0043 Score=52.83 Aligned_cols=49 Identities=29% Similarity=0.390 Sum_probs=38.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC--------------------------------------CCCHhhhcCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL--------------------------------------TKNPEQITSE 179 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~--------------------------------------t~~l~~~~~~ 179 (269)
+|.|||+|.+ |+.+|..++..|..|+++.+. +.++.+.. +
T Consensus 1 ~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~ 78 (180)
T PF02737_consen 1 KVAVIGAGTM-GRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-D 78 (180)
T ss_dssp EEEEES-SHH-HHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-T
T ss_pred CEEEEcCCHH-HHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-h
Confidence 6899999887 999999999999999999654 13455555 9
Q ss_pred CCEEEeccC
Q 024306 180 ADIVIAAAG 188 (269)
Q Consensus 180 aDiVIsAtg 188 (269)
||+||-|++
T Consensus 79 adlViEai~ 87 (180)
T PF02737_consen 79 ADLVIEAIP 87 (180)
T ss_dssp ESEEEE-S-
T ss_pred hheehhhcc
Confidence 999999987
No 180
>TIGR03316 ygeW probable carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism.
Probab=96.59 E-value=0.055 Score=51.14 Aligned_cols=150 Identities=16% Similarity=0.091 Sum_probs=95.2
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCC---CCCCHHHHHhcCCc-ccc-c--cc
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLP---QHLDEGKILDAVSL-EKD-V--DG 97 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~---~~~~~~~i~~~i~p-~kd-v--dg 97 (269)
+-..++.++|.++.++.-. ++ .-|-+.+.++-|+.- +|+|.+-.|-. .+-...++.+.... -|| | -.
T Consensus 59 SFE~A~~~LGg~~i~l~~~-~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~~~~~~~~~~l~~~a~~~~~~~~~~~~~s~ 135 (357)
T TIGR03316 59 SFASAMNLLGLHAQDLDEG-KSQIGHGETVRETAEMISFF--ADGIGIRDDMYIGVGNAYMREVAKYVQEGYKDGVLEQR 135 (357)
T ss_pred HHHHHHHHcCCcEEEeCCc-cccCCCCCCHHHHHHHHHHh--CcEEEEeCCCccccccHHHHHHHHhhhhccccccccCC
Confidence 3566889999999888632 21 135677888888773 88999987742 21111223332110 121 0 01
Q ss_pred cccceecccccCCCCCccccCCHHH-HHHHHHHhCC--CCccceEEEEcCC-------cccHHHHHHHHHhCCCEEEEEe
Q 024306 98 FHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV--EIMGKNAVVIGRS-------NIVGLPTSLLLQRHHATVSIVH 167 (269)
Q Consensus 98 ~~~~n~g~l~~g~~~~~~~p~t~~g-~~~~l~~~~~--~l~gk~v~ViG~g-------g~vg~~~a~~L~~~ga~Vti~~ 167 (269)
+-.+|.| .+.+.||=+.+ ++.+.++.|. +++|++|+++|.| ..|.+.++.+++..|++|++++
T Consensus 136 vPVINa~-------~~~~HPtQaLaDl~Ti~e~~G~~~~l~g~kvai~~~~d~~~gr~~~v~~Sl~~~~~~~G~~v~~~~ 208 (357)
T TIGR03316 136 PPLVNLQ-------CDIDHPTQAMADIMTLQEKFGGIENLKGKKFAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAH 208 (357)
T ss_pred CCEEECC-------CCCCCchHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEEC
Confidence 2334542 23466998887 4555556653 4789999999743 2567888888999999999996
Q ss_pred CCC-------------------------CCHhhhcCCCCEEEecc
Q 024306 168 ALT-------------------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 168 ~~t-------------------------~~l~~~~~~aDiVIsAt 187 (269)
... .++.+.+++||+|.+-+
T Consensus 209 P~~~~~~~~~~~~a~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~ 253 (357)
T TIGR03316 209 PEGYHLLPEVIEVAKKNAAENGGKFNIVNSMDEAFKDADIVYPKS 253 (357)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEECC
Confidence 541 34567789999988663
No 181
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.57 E-value=0.0042 Score=59.70 Aligned_cols=74 Identities=27% Similarity=0.349 Sum_probs=54.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------CHhhh---------------cCCCCEEEec
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQI---------------TSEADIVIAA 186 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------~l~~~---------------~~~aDiVIsA 186 (269)
++|.|||.|.+ |.++|..|+++|.+|+.++++.. .+.+. .++||+||.+
T Consensus 4 ~kI~VIGlG~~-G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYI-GLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchh-hHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 68999999886 99999999999999999987632 12111 3379999999
Q ss_pred cCCC---------Cccc------CCCcCCCcEEEEeeecC
Q 024306 187 AGVA---------NLVR------GSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 187 tg~p---------~~i~------~~~~~~g~vViDv~~~~ 211 (269)
++.| ..+. ...+++|++||+...-+
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~ 122 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP 122 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 9976 1111 12457899998887644
No 182
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=96.57 E-value=0.004 Score=56.67 Aligned_cols=69 Identities=22% Similarity=0.316 Sum_probs=53.6
Q ss_pred EEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCCc----cc--C---CC
Q 024306 141 VIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----VR--G---SW 197 (269)
Q Consensus 141 ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~~----i~--~---~~ 197 (269)
+||.|.+ |.+++..|.+.|.+|++++++. .+..+.++++|+||.+++.+.. +. . ..
T Consensus 1 ~IGlG~m-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~ 79 (288)
T TIGR01692 1 FIGLGNM-GGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPK 79 (288)
T ss_pred CCcccHh-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhc
Confidence 5799886 9999999999999999998762 3566778999999999986431 21 1 23
Q ss_pred cCCCcEEEEeeec
Q 024306 198 LKPGAVVLDVGTC 210 (269)
Q Consensus 198 ~~~g~vViDv~~~ 210 (269)
++++.++||+...
T Consensus 80 ~~~g~~vid~st~ 92 (288)
T TIGR01692 80 VAKGSLLIDCSTI 92 (288)
T ss_pred CCCCCEEEECCCC
Confidence 5778999998854
No 183
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.54 E-value=0.0051 Score=55.96 Aligned_cols=72 Identities=15% Similarity=0.210 Sum_probs=51.8
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------------------------CCHhhhcC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------------KNPEQITS 178 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------------------------------~~l~~~~~ 178 (269)
++|.|||+|-+ |.++|..|++.|.+|+++++.. .++.+.++
T Consensus 2 ~~V~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGAGVM-GRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECccHH-HHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 57999999886 9999999999999999997541 23446788
Q ss_pred CCCEEEeccCCCC-----ccc--CCCcCCCcEE-EEeee
Q 024306 179 EADIVIAAAGVAN-----LVR--GSWLKPGAVV-LDVGT 209 (269)
Q Consensus 179 ~aDiVIsAtg~p~-----~i~--~~~~~~g~vV-iDv~~ 209 (269)
+||+||.+++... ++. .+.+++++++ +|...
T Consensus 81 ~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt 119 (288)
T PRK09260 81 DADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTST 119 (288)
T ss_pred CCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence 9999999998532 111 1235666654 45553
No 184
>PRK06199 ornithine cyclodeaminase; Validated
Probab=96.52 E-value=0.006 Score=58.03 Aligned_cols=75 Identities=23% Similarity=0.321 Sum_probs=57.5
Q ss_pred ccceEEEEcCCcccHHHHHHHHHh-C-CC-EEEEEeCCC-----------------------CCHhhhcCCCCEEEeccC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQR-H-HA-TVSIVHALT-----------------------KNPEQITSEADIVIAAAG 188 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~-~-ga-~Vti~~~~t-----------------------~~l~~~~~~aDiVIsAtg 188 (269)
.-+++.|||+|.- |+.-+.++.. + .. +|.+.+|+. .+.++.+++||||+++|+
T Consensus 154 da~~l~iiG~G~Q-A~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~ 232 (379)
T PRK06199 154 DSKVVGLLGPGVM-GKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNS 232 (379)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccC
Confidence 4578999999987 9988888766 3 23 699987752 235577899999999997
Q ss_pred CC-------CcccCCCcCCCcEEEEeeec
Q 024306 189 VA-------NLVRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 189 ~p-------~~i~~~~~~~g~vViDv~~~ 210 (269)
.. .++..+|+++|+.|+=+|..
T Consensus 233 s~~~~~s~~Pv~~~~~lkpG~hv~~ig~~ 261 (379)
T PRK06199 233 GETGDPSTYPYVKREWVKPGAFLLMPAAC 261 (379)
T ss_pred CCCCCCCcCcEecHHHcCCCcEEecCCcc
Confidence 42 25899999999988766653
No 185
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.52 E-value=0.0056 Score=55.45 Aligned_cols=71 Identities=11% Similarity=0.234 Sum_probs=52.4
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCC----CEEEEEeCCC----------------CCHhhhcCCCCEEEeccCCCCc---
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT----------------KNPEQITSEADIVIAAAGVANL--- 192 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~g----a~Vti~~~~t----------------~~l~~~~~~aDiVIsAtg~p~~--- 192 (269)
..+|.+||.|.+ |.+++..|.+.| .+|++++|+. .+..+.+++||+||.++.....
T Consensus 3 ~mkI~~IG~G~m-G~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~v 81 (279)
T PRK07679 3 IQNISFLGAGSI-AEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAEA 81 (279)
T ss_pred CCEEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHHH
Confidence 458999999887 999999999887 5788988752 1233556889999999984331
Q ss_pred cc--CCCcCCCcEEEEe
Q 024306 193 VR--GSWLKPGAVVLDV 207 (269)
Q Consensus 193 i~--~~~~~~g~vViDv 207 (269)
+. ...++++.+|||+
T Consensus 82 l~~l~~~~~~~~liIs~ 98 (279)
T PRK07679 82 LIPFKEYIHNNQLIISL 98 (279)
T ss_pred HHHHHhhcCCCCEEEEE
Confidence 21 1235678899997
No 186
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.49 E-value=0.0068 Score=55.53 Aligned_cols=72 Identities=18% Similarity=0.253 Sum_probs=54.3
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCC---CCEEEeccCCCC----ccc--
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSE---ADIVIAAAGVAN----LVR-- 194 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~---aDiVIsAtg~p~----~i~-- 194 (269)
+|.+||.|.+ |.+++..|.+.|.+|++++++. .+..+.+++ +|+||.+++.+. .+.
T Consensus 2 ~Ig~IGlG~m-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~~i 80 (299)
T PRK12490 2 KLGLIGLGKM-GGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIKDL 80 (299)
T ss_pred EEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHHHH
Confidence 5899999987 9999999999999999998762 244455544 699999998652 121
Q ss_pred CCCcCCCcEEEEeeec
Q 024306 195 GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 195 ~~~~~~g~vViDv~~~ 210 (269)
...+++|.++||++..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (299)
T PRK12490 81 YPLLSPGDIVVDGGNS 96 (299)
T ss_pred hccCCCCCEEEECCCC
Confidence 1235789999999644
No 187
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.48 E-value=0.0097 Score=54.51 Aligned_cols=72 Identities=17% Similarity=0.252 Sum_probs=54.8
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCCCC----cc-cCC---
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVAN----LV-RGS--- 196 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~p~----~i-~~~--- 196 (269)
+|.+||.|.+ |.+++..|.+.|.+|++++++. .+..+..+++|+||.+++.+. .+ ..+
T Consensus 2 ~Ig~IGlG~M-G~~ma~~L~~~G~~v~v~~~~~~~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~ 80 (292)
T PRK15059 2 KLGFIGLGIM-GTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT 80 (292)
T ss_pred eEEEEccCHH-HHHHHHHHHHCCCeEEEEeCCHhHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence 5899999987 9999999999999999987652 234456789999999998532 12 211
Q ss_pred -CcCCCcEEEEeeec
Q 024306 197 -WLKPGAVVLDVGTC 210 (269)
Q Consensus 197 -~~~~g~vViDv~~~ 210 (269)
.+++|.++||++..
T Consensus 81 ~~~~~g~ivvd~sT~ 95 (292)
T PRK15059 81 KASLKGKTIVDMSSI 95 (292)
T ss_pred ccCCCCCEEEECCCC
Confidence 25678999998854
No 188
>PRK06398 aldose dehydrogenase; Validated
Probab=96.46 E-value=0.0071 Score=53.60 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.++..|.++|++|+++.|+
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 4789999999999888999999999999999887664
No 189
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.46 E-value=0.0049 Score=57.05 Aligned_cols=72 Identities=17% Similarity=0.175 Sum_probs=54.8
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------CCHhhhcCCCCEEEeccC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAAG 188 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------------------~~l~~~~~~aDiVIsAtg 188 (269)
.+|.|||+|.+ |.+++..|++.|.+|++.+|+. .++.+.++++|+||.+++
T Consensus 5 m~I~iIG~G~m-G~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~ 83 (328)
T PRK14618 5 MRVAVLGAGAW-GTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVP 83 (328)
T ss_pred CeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECc
Confidence 47999999886 9999999999999999997742 134456788999999998
Q ss_pred CCCccc-CCCcCCCcEEEEeee
Q 024306 189 VANLVR-GSWLKPGAVVLDVGT 209 (269)
Q Consensus 189 ~p~~i~-~~~~~~g~vViDv~~ 209 (269)
....-. -+.++++.+++++..
T Consensus 84 ~~~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 84 SKALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred hHHHHHHHHhcCcCCEEEEEee
Confidence 653210 133677888999864
No 190
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.42 E-value=0.0059 Score=55.42 Aligned_cols=72 Identities=17% Similarity=0.230 Sum_probs=51.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC----EEEEEeCCC---------------CCHhhhcCCCCEEEeccCCCCc---cc
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA----TVSIVHALT---------------KNPEQITSEADIVIAAAGVANL---VR 194 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga----~Vti~~~~t---------------~~l~~~~~~aDiVIsAtg~p~~---i~ 194 (269)
+++.+||.|.+ |.+++..|.+.|. +|++++++. .+..+.+++||+||-++.-..+ +.
T Consensus 3 ~~IgfIG~G~M-G~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavkP~~~~~vl~ 81 (272)
T PRK12491 3 KQIGFIGCGNM-GIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIKPDLYSSVIN 81 (272)
T ss_pred CeEEEECccHH-HHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeChHHHHHHHH
Confidence 47999999987 9999999998873 588887652 1233456789999999983221 11
Q ss_pred --CCCcCCCcEEEEeee
Q 024306 195 --GSWLKPGAVVLDVGT 209 (269)
Q Consensus 195 --~~~~~~g~vViDv~~ 209 (269)
...++++.+|||+.-
T Consensus 82 ~l~~~~~~~~lvISi~A 98 (272)
T PRK12491 82 QIKDQIKNDVIVVTIAA 98 (272)
T ss_pred HHHHhhcCCcEEEEeCC
Confidence 123567788888864
No 191
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=96.42 E-value=0.068 Score=50.15 Aligned_cols=143 Identities=15% Similarity=0.052 Sum_probs=92.2
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|..+.++.=+.++ ..|.+.+.++-|+.- +|+|.+-.|-.. ...++.+.. .+-.+|.|
T Consensus 61 SFe~A~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y--~D~IviR~~~~~--~~~~~a~~~-------~vPVINa~ 129 (338)
T PRK08192 61 SFGCAFNLLGGHVRETTGMASSSLSKGESLYDTARVLSTY--SDVIAMRHPDAG--SVKEFAEGS-------RVPVINGG 129 (338)
T ss_pred HHHHHHHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHc--CCEEEEeCCchh--HHHHHHHhC-------CCCEEECC
Confidence 3567899999998864211111 235677777777773 889999877432 223332221 13344542
Q ss_pred ccccCCCCCccccCCHHH-HHHHHHHh---CCCCccceEEEEcCC--cccHHHHHHHHHhC-CCEEEEEeCC--------
Q 024306 105 NLAMRGREPLFIPCTPKG-CIELLIRS---GVEIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL-------- 169 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g-~~~~l~~~---~~~l~gk~v~ViG~g--g~vg~~~a~~L~~~-ga~Vti~~~~-------- 169 (269)
. -+.+.||=+.+ ++.+.++. +.+++|++|+++|-+ +-+.+.++..|... |++|++++..
T Consensus 130 ~------g~~~HPtQaLaDl~Ti~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P~~~~~~~~~ 203 (338)
T PRK08192 130 D------GSNEHPTQALLDLFTIQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSPKELAMPDYV 203 (338)
T ss_pred C------CCCCCcHHHHHHHHHHHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECCccccCCHHH
Confidence 1 12456998887 44444443 347999999999996 44578888776644 8899988643
Q ss_pred -------------CCCHhhhcCCCCEEEecc
Q 024306 170 -------------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 -------------t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+.+++||+|++..
T Consensus 204 ~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~ 234 (338)
T PRK08192 204 ISDIENAGHKITITDQLEGNLDKADILYLTR 234 (338)
T ss_pred HHHHHHcCCeEEEEcCHHHHHccCCEEEEcC
Confidence 145678999999999853
No 192
>PRK08223 hypothetical protein; Validated
Probab=96.38 E-value=0.007 Score=55.43 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=30.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEe
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 167 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~ 167 (269)
.++.++|+|+|+||. |-+++..|+..|. ++++++
T Consensus 24 kL~~s~VlIvG~GGL-Gs~va~~LA~aGVG~i~lvD 58 (287)
T PRK08223 24 RLRNSRVAIAGLGGV-GGIHLLTLARLGIGKFTIAD 58 (287)
T ss_pred HHhcCCEEEECCCHH-HHHHHHHHHHhCCCeEEEEe
Confidence 367899999999997 9999999999996 688884
No 193
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.38 E-value=0.0062 Score=52.83 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=31.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~ 168 (269)
.++.++|+|+|+|+. |..++..|++.|. ++++++.
T Consensus 18 ~L~~~~V~IvG~Ggl-Gs~ia~~La~~Gvg~i~lvD~ 53 (200)
T TIGR02354 18 KLEQATVAICGLGGL-GSNVAINLARAGIGKLILVDF 53 (200)
T ss_pred HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEECC
Confidence 467899999999997 9999999999998 6999854
No 194
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.0055 Score=53.72 Aligned_cols=38 Identities=26% Similarity=0.329 Sum_probs=34.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+.+++.|.++|++|+++.|+
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~ 42 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRR 42 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998888999999999999999988765
No 195
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.0091 Score=52.53 Aligned_cols=38 Identities=29% Similarity=0.317 Sum_probs=34.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+.+++.|+++|++|.++.|.
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998888999999999999999888764
No 196
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.35 E-value=0.0056 Score=49.43 Aligned_cols=72 Identities=24% Similarity=0.280 Sum_probs=46.3
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------CCHhhhcCCCCEEEeccCCCC-------c
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQITSEADIVIAAAGVAN-------L 192 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------~~l~~~~~~aDiVIsAtg~p~-------~ 192 (269)
--+|.|||+|.+ |..++..|.+.|..|.-+.+++ .++.+.+++||++|-+++-.. +
T Consensus 10 ~l~I~iIGaGrV-G~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDdaI~~va~~L 88 (127)
T PF10727_consen 10 RLKIGIIGAGRV-GTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDAIAEVAEQL 88 (127)
T ss_dssp --EEEEECTSCC-CCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCHHHHHHHHH
T ss_pred ccEEEEECCCHH-HHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechHHHHHHHHHH
Confidence 357999999996 9999999999999987775442 234577899999999998421 2
Q ss_pred ccCCCcCCCcEEEEee
Q 024306 193 VRGSWLKPGAVVLDVG 208 (269)
Q Consensus 193 i~~~~~~~g~vViDv~ 208 (269)
-....+++|.+|+=+.
T Consensus 89 a~~~~~~~g~iVvHtS 104 (127)
T PF10727_consen 89 AQYGAWRPGQIVVHTS 104 (127)
T ss_dssp HCC--S-TT-EEEES-
T ss_pred HHhccCCCCcEEEECC
Confidence 1222467888887654
No 197
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=96.34 E-value=0.0088 Score=55.51 Aligned_cols=55 Identities=20% Similarity=0.249 Sum_probs=44.5
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~ 189 (269)
++||+|.|||.|.+ |.+++..|.+.|.+|++..+.. .+..+.+++||+|+.+++-
T Consensus 1 l~~kkIgiIG~G~m-G~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp 69 (314)
T TIGR00465 1 LKGKTVAIIGYGSQ-GHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPD 69 (314)
T ss_pred CCcCEEEEEeEcHH-HHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCc
Confidence 57999999999997 9999999999998877654331 1245667899999999984
No 198
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.32 E-value=0.0088 Score=57.49 Aligned_cols=35 Identities=23% Similarity=0.362 Sum_probs=32.1
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||+++|+|.|++ |+++|+.|+++|++|+++.+.
T Consensus 3 ~~~k~v~v~G~g~~-G~s~a~~l~~~G~~V~~~d~~ 37 (447)
T PRK02472 3 YQNKKVLVLGLAKS-GYAAAKLLHKLGANVTVNDGK 37 (447)
T ss_pred cCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEEcCC
Confidence 57999999999995 999999999999999999764
No 199
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=96.32 E-value=0.019 Score=52.75 Aligned_cols=141 Identities=16% Similarity=0.175 Sum_probs=92.8
Q ss_pred HHHHHHHcCCeEEEEEcCCC-C-CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceeccc
Q 024306 29 KIKACEEVGIKSIVTEFADG-C-TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNL 106 (269)
Q Consensus 29 ~~~~~~~~Gi~~~~~~~~~~-~-~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~l 106 (269)
-.-++..+|..+.|+.=... . ..|.+.+.-+=|..- +|||.+--. .|-+..++.+ . .++- +
T Consensus 62 Feva~~qlGg~~~~l~~~~~Qlgr~Esi~DTArVLsr~--~D~I~~R~~--~~~~ve~lA~----~---s~VP------V 124 (310)
T COG0078 62 FEVAATQLGGHAIYLGPGDSQLGRGESIKDTARVLSRM--VDAIMIRGF--SHETLEELAK----Y---SGVP------V 124 (310)
T ss_pred HHHHHHHcCCCeEEeCCCccccCCCCcHHHHHHHHHhh--hheEEEecc--cHHHHHHHHH----h---CCCc------e
Confidence 44577788888877653210 0 123344444444442 778877554 2221122211 1 1111 2
Q ss_pred ccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC-----------------
Q 024306 107 AMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------- 169 (269)
Q Consensus 107 ~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~----------------- 169 (269)
++| -++.+.||-..|=+--++++...++|++++-+|-|+.|+..+....+..|.+|+++...
T Consensus 125 iNg-LtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv~ia~Pk~~~p~~~~~~~a~~~a~ 203 (310)
T COG0078 125 ING-LTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDVRIATPKGYEPDPEVVEKAKENAK 203 (310)
T ss_pred Ecc-cccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeEEEECCCcCCcCHHHHHHHHHHHH
Confidence 223 36778899999965555555555999999999999999999999999999999999643
Q ss_pred --------CCCHhhhcCCCCEEEecc
Q 024306 170 --------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 --------t~~l~~~~~~aDiVIsAt 187 (269)
+.+..+++++||+|.+-+
T Consensus 204 ~~g~~i~~t~d~~eAv~gADvvyTDv 229 (310)
T COG0078 204 ESGGKITLTEDPEEAVKGADVVYTDV 229 (310)
T ss_pred hcCCeEEEecCHHHHhCCCCEEEecC
Confidence 347788999999999665
No 200
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.31 E-value=0.0065 Score=52.66 Aligned_cols=35 Identities=26% Similarity=0.543 Sum_probs=31.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~ 168 (269)
.+++++|+|+|.||. |..+++.|+..|. ++++++.
T Consensus 18 kl~~~~VlviG~Ggl-Gs~ia~~La~~Gv~~i~lvD~ 53 (202)
T TIGR02356 18 RLLNSHVLIIGAGGL-GSPAALYLAGAGVGTIVIVDD 53 (202)
T ss_pred HhcCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEecC
Confidence 468899999999997 9999999999997 7998854
No 201
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.30 E-value=0.0096 Score=54.14 Aligned_cols=52 Identities=25% Similarity=0.289 Sum_probs=43.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------------------------CCHhhhc
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------------KNPEQIT 177 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------------------------------~~l~~~~ 177 (269)
++|.|||+|-+ |.++|..|+..|.+|+++.+.. .++.+.+
T Consensus 4 ~kIaViGaG~m-G~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~ 82 (287)
T PRK08293 4 KNVTVAGAGVL-GSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAV 82 (287)
T ss_pred cEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHh
Confidence 57999999886 9999999999999999996531 2345568
Q ss_pred CCCCEEEeccCC
Q 024306 178 SEADIVIAAAGV 189 (269)
Q Consensus 178 ~~aDiVIsAtg~ 189 (269)
++||+||.|++.
T Consensus 83 ~~aDlVieavpe 94 (287)
T PRK08293 83 KDADLVIEAVPE 94 (287)
T ss_pred cCCCEEEEeccC
Confidence 899999999984
No 202
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=96.29 E-value=0.0096 Score=58.95 Aligned_cols=93 Identities=15% Similarity=0.228 Sum_probs=73.8
Q ss_pred CCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh----CCC-------EEEEEeCC-----------------
Q 024306 118 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHAL----------------- 169 (269)
Q Consensus 118 ~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~----~ga-------~Vti~~~~----------------- 169 (269)
++-.|++..++-.+.++++.++++.|+|.+ |..+|.+|.. +|. .+++++++
T Consensus 279 V~lAgll~Alr~~g~~l~d~riv~~GAGsA-giGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~ 357 (559)
T PTZ00317 279 VIAAGFLNALKLSGVPPEEQRIVFFGAGSA-AIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVP 357 (559)
T ss_pred HHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHH
Confidence 456788999999999999999999999998 9999998873 676 58888543
Q ss_pred ------------CCCHhhhcCCC--CEEEeccCCCCcccCCCcC------CCcEEEEeeecCC
Q 024306 170 ------------TKNPEQITSEA--DIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV 212 (269)
Q Consensus 170 ------------t~~l~~~~~~a--DiVIsAtg~p~~i~~~~~~------~g~vViDv~~~~~ 212 (269)
..+|.+.++.+ |++|-+.+.|+.|++++++ +.-+|+=++ ||.
T Consensus 358 fa~~~~~~~~~~~~~L~e~v~~~KPtvLIG~S~~~g~Ft~evv~~Ma~~~~rPIIFaLS-NPt 419 (559)
T PTZ00317 358 FARTDISAEDSSLKTLEDVVRFVKPTALLGLSGVGGVFTEEVVKTMASNVERPIIFPLS-NPT 419 (559)
T ss_pred HhccccccccccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 01467778888 9999988888888888875 355777666 554
No 203
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.25 E-value=0.0067 Score=54.12 Aligned_cols=34 Identities=12% Similarity=0.343 Sum_probs=30.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEe
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 167 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~ 167 (269)
.+++++|+|+|.||. |..++..|+..|. ++++++
T Consensus 21 ~L~~~~VlvvG~Ggl-Gs~va~~La~~Gvg~i~lvD 55 (240)
T TIGR02355 21 ALKASRVLIVGLGGL-GCAASQYLAAAGVGNLTLLD 55 (240)
T ss_pred HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEEe
Confidence 367899999999997 9999999999996 688884
No 204
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.0098 Score=52.81 Aligned_cols=57 Identities=18% Similarity=0.229 Sum_probs=44.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-C---------------------CHhhhcCCCCEEEeccCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-K---------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-~---------------------~l~~~~~~aDiVIsAtg~ 189 (269)
.++||+++|.|+++-+|+.++..|+++|++|.++.|.. . ++.+.+.+.|++|+..|.
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 46899999999988889999999999999988876543 1 112344567888877774
No 205
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.21 E-value=0.012 Score=53.83 Aligned_cols=72 Identities=19% Similarity=0.270 Sum_probs=53.3
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCC---CCEEEeccCCCCc----cc--
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSE---ADIVIAAAGVANL----VR-- 194 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~---aDiVIsAtg~p~~----i~-- 194 (269)
+|.+||.|.+ |.+++..|.+.|.+|++++++. .+..+.++. +|+||.+++.... +.
T Consensus 2 ~Ig~IGlG~M-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~~l 80 (301)
T PRK09599 2 QLGMIGLGRM-GGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATIDEL 80 (301)
T ss_pred EEEEEcccHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHHHHH
Confidence 6899999887 9999999999999999998863 133444443 6999999886421 11
Q ss_pred CCCcCCCcEEEEeeec
Q 024306 195 GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 195 ~~~~~~g~vViDv~~~ 210 (269)
...++++.++||++..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (301)
T PRK09599 81 APLLSPGDIVIDGGNS 96 (301)
T ss_pred HhhCCCCCEEEeCCCC
Confidence 1346778899998643
No 206
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.21 E-value=0.011 Score=51.00 Aligned_cols=57 Identities=26% Similarity=0.353 Sum_probs=44.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------CH----h---hhcCCCCEEEeccCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NP----E---QITSEADIVIAAAGV 189 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------~l----~---~~~~~aDiVIsAtg~ 189 (269)
+++||+++|.|+++.+|+.++..|+++|++|+++.+... |+ . +.....|++|+..|.
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 368999999999888999999999999999988876521 11 1 123457999987773
No 207
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.19 E-value=0.0093 Score=54.66 Aligned_cols=72 Identities=18% Similarity=0.159 Sum_probs=53.6
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------CH---hhhcCCCCEEEeccCCCC---ccc--C
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NP---EQITSEADIVIAAAGVAN---LVR--G 195 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------~l---~~~~~~aDiVIsAtg~p~---~i~--~ 195 (269)
+|.|||.|.+ |.+++..|.+.|.+|++.+|+.. ++ .+.+.++|+||.+++... .+. .
T Consensus 2 ~Ig~IGlG~m-G~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~~~l~ 80 (298)
T TIGR00872 2 QLGLIGLGRM-GANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVLEELA 80 (298)
T ss_pred EEEEEcchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHHHHHH
Confidence 6899999887 99999999999999999987631 22 234567899999988542 111 1
Q ss_pred CCcCCCcEEEEeeec
Q 024306 196 SWLKPGAVVLDVGTC 210 (269)
Q Consensus 196 ~~~~~g~vViDv~~~ 210 (269)
..+++|.+|||++..
T Consensus 81 ~~l~~g~ivid~st~ 95 (298)
T TIGR00872 81 PTLEKGDIVIDGGNS 95 (298)
T ss_pred hhCCCCCEEEECCCC
Confidence 246788999998754
No 208
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=96.16 E-value=0.015 Score=51.45 Aligned_cols=52 Identities=19% Similarity=0.297 Sum_probs=43.1
Q ss_pred ccCCHHHHHHHHH----HhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE-EEeC
Q 024306 116 IPCTPKGCIELLI----RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHA 168 (269)
Q Consensus 116 ~p~t~~g~~~~l~----~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vt-i~~~ 168 (269)
.|.|++|+...++ +.+.+++|++|+|.|.|.+ |+.+++.|.++|++|+ ++.+
T Consensus 7 ~~~Tg~Gv~~~~~~~~~~~~~~l~~~~v~I~G~G~V-G~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 7 EEATGRGVAYATREALKKLGIGLAGARVAIQGFGNV-GSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CccchHHHHHHHHHHHHhcCCCccCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECC
Confidence 4678888766654 4567899999999999885 9999999999999976 7765
No 209
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.16 E-value=0.013 Score=52.86 Aligned_cols=69 Identities=19% Similarity=0.276 Sum_probs=51.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC---------------CCHhhhcCCCCEEEeccCCCC---c---cc
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT---------------KNPEQITSEADIVIAAAGVAN---L---VR 194 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t---------------~~l~~~~~~aDiVIsAtg~p~---~---i~ 194 (269)
+|.|||.|.+ |.+++..|.+.|. +|++++++. .+..+. .++|+||.+++... . +.
T Consensus 2 ~I~iIG~G~m-G~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~-~~aD~Vilavp~~~~~~~~~~l~ 79 (275)
T PRK08507 2 KIGIIGLGLM-GGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEEL-KKCDVIFLAIPVDAIIEILPKLL 79 (275)
T ss_pred EEEEEccCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHH-hcCCEEEEeCcHHHHHHHHHHHh
Confidence 6899999886 9999999999885 688777642 123343 45999999998532 2 22
Q ss_pred CCCcCCCcEEEEeeec
Q 024306 195 GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 195 ~~~~~~g~vViDv~~~ 210 (269)
+ ++++++|+|++..
T Consensus 80 ~--l~~~~iv~d~gs~ 93 (275)
T PRK08507 80 D--IKENTTIIDLGST 93 (275)
T ss_pred c--cCCCCEEEECccc
Confidence 2 6789999998864
No 210
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=96.15 E-value=0.015 Score=55.63 Aligned_cols=72 Identities=28% Similarity=0.330 Sum_probs=53.3
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------------------------------CHhhhcCCCCEE
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------------------------NPEQITSEADIV 183 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------------------------------~l~~~~~~aDiV 183 (269)
+|.|||.|.+ |.++|..|++.|.+|++++++.. +..+.++++|+|
T Consensus 2 kI~vIGlG~~-G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advv 80 (411)
T TIGR03026 2 KIAVIGLGYV-GLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVI 80 (411)
T ss_pred EEEEECCCch-hHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEE
Confidence 6899999886 99999999999999999976421 223457889999
Q ss_pred EeccCCCCc---------cc------CCCcCCCcEEEEeeec
Q 024306 184 IAAAGVANL---------VR------GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 184 IsAtg~p~~---------i~------~~~~~~g~vViDv~~~ 210 (269)
|.+++.|.- +. ...++++++|+|...-
T Consensus 81 ii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv 122 (411)
T TIGR03026 81 IICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTV 122 (411)
T ss_pred EEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcC
Confidence 999986521 10 1134678888887743
No 211
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=96.15 E-value=0.015 Score=51.12 Aligned_cols=48 Identities=15% Similarity=0.157 Sum_probs=38.9
Q ss_pred HHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCC
Q 024306 121 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHAL 169 (269)
Q Consensus 121 ~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~-Vti~~~~ 169 (269)
.++.+.+++.+.+++|++|+|.|.|.+ |+.+++.|.++|+. |.+++++
T Consensus 8 ~~~~~~~~~~~~~l~g~~vaIqGfGnV-G~~~a~~L~~~G~~vV~vsD~~ 56 (217)
T cd05211 8 VAMKAAMKHLGDSLEGLTVAVQGLGNV-GWGLAKKLAEEGGKVLAVSDPD 56 (217)
T ss_pred HHHHHHHHHcCCCcCCCEEEEECCCHH-HHHHHHHHHHcCCEEEEEEcCC
Confidence 334555667778999999999999885 99999999999985 6677654
No 212
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.15 E-value=0.023 Score=49.07 Aligned_cols=36 Identities=14% Similarity=0.215 Sum_probs=31.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~ 169 (269)
.++.++|+|+|.|+. |..+++.|+..|. ++++++..
T Consensus 18 ~L~~s~VlIiG~ggl-G~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 18 RLRSARILLIGLKGL-GAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHHhCcEEEEcCCHH-HHHHHHHHHHcCCCEEEEEECC
Confidence 367899999999995 9999999999997 69999543
No 213
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.15 E-value=0.0048 Score=54.37 Aligned_cols=34 Identities=18% Similarity=0.412 Sum_probs=30.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEe
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 167 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~ 167 (269)
.++.++|+|+|.||. |..+++.|+..|. ++++++
T Consensus 18 ~L~~~~VlivG~Ggl-Gs~va~~La~~Gvg~i~lvD 52 (228)
T cd00757 18 KLKNARVLVVGAGGL-GSPAAEYLAAAGVGKLGLVD 52 (228)
T ss_pred HHhCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEc
Confidence 467899999999997 9999999999997 688883
No 214
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.13 E-value=0.0089 Score=56.01 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=30.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~ 168 (269)
.+++++|+|||.|+. |.+++..|+..|. +++++++
T Consensus 21 ~L~~~~VlIiG~Ggl-Gs~va~~La~aGvg~i~lvD~ 56 (338)
T PRK12475 21 KIREKHVLIVGAGAL-GAANAEALVRAGIGKLTIADR 56 (338)
T ss_pred hhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC
Confidence 468899999999996 9999999999997 7888854
No 215
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.13 E-value=0.0048 Score=65.44 Aligned_cols=115 Identities=15% Similarity=0.186 Sum_probs=76.4
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCC-CE-------------EEEEeCCC-----------------------CCHhhhc
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHH-AT-------------VSIVHALT-----------------------KNPEQIT 177 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~g-a~-------------Vti~~~~t-----------------------~~l~~~~ 177 (269)
+.|+|+|||+|.+ |++.+..|++.. ++ |+++.+.. .++.+.+
T Consensus 568 ~~~rIlVLGAG~V-G~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v 646 (1042)
T PLN02819 568 KSQNVLILGAGRV-CRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV 646 (1042)
T ss_pred cCCcEEEECCCHH-HHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence 5789999999886 999999998653 33 88886431 1234455
Q ss_pred CCCCEEEeccCC-CCc-ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHH
Q 024306 178 SEADIVIAAAGV-ANL-VRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLL 255 (269)
Q Consensus 178 ~~aDiVIsAtg~-p~~-i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl 255 (269)
+++|+||++++. -|. +-...++.|.-++|..|...+. ..+. +.+++++...=+-=|+-|--..|+.
T Consensus 647 ~~~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e~------~~L~------e~Ak~AGV~~m~e~GlDPGid~~lA 714 (1042)
T PLN02819 647 SQVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEEM------SALD------SKAKEAGITILCEMGLDPGIDHMMA 714 (1042)
T ss_pred cCCCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHHH------HHHH------HHHHHcCCEEEECCccCHHHHHHHH
Confidence 789999999995 233 5556677788888887543222 0122 3455555422222346687888998
Q ss_pred HHHHHHH
Q 024306 256 SNTLDSA 262 (269)
Q Consensus 256 ~n~v~a~ 262 (269)
.+++..+
T Consensus 715 ~~~Id~~ 721 (1042)
T PLN02819 715 MKMIDDA 721 (1042)
T ss_pred HHHHHhh
Confidence 8888776
No 216
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.12 E-value=0.021 Score=53.46 Aligned_cols=92 Identities=14% Similarity=0.175 Sum_probs=59.3
Q ss_pred CCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---------------------Hhhh
Q 024306 118 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PEQI 176 (269)
Q Consensus 118 ~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~---------------------l~~~ 176 (269)
|....+...+......-.|++|+|.|+|+ +|..+++.+..+|++|+++...... +.+.
T Consensus 166 ~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~ 244 (360)
T PLN02586 166 CAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAA 244 (360)
T ss_pred cchHHHHHHHHHhcccCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhh
Confidence 33333444454444434799999999976 5999999999999987665432211 1122
Q ss_pred cCCCCEEEeccCCCCcc--cCCCcCCCcEEEEeeec
Q 024306 177 TSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 177 ~~~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
...+|+||.++|.+..+ .-+.++++-.++.++..
T Consensus 245 ~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~ 280 (360)
T PLN02586 245 IGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLP 280 (360)
T ss_pred cCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCC
Confidence 23479999999865432 23357788778888754
No 217
>PLN02688 pyrroline-5-carboxylate reductase
Probab=96.12 E-value=0.013 Score=52.38 Aligned_cols=68 Identities=13% Similarity=0.212 Sum_probs=48.2
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC----EEEEE-eCCC--------------CCHhhhcCCCCEEEeccCCCCc----cc
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHA----TVSIV-HALT--------------KNPEQITSEADIVIAAAGVANL----VR 194 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga----~Vti~-~~~t--------------~~l~~~~~~aDiVIsAtg~p~~----i~ 194 (269)
+|.+||.|.+ |.+++..|.+.|. +|+++ +|+. .+..+.++++|+||.++. |.. +.
T Consensus 2 kI~~IG~G~m-G~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v~-~~~~~~vl~ 79 (266)
T PLN02688 2 RVGFIGAGKM-AEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVK-PQVVKDVLT 79 (266)
T ss_pred eEEEECCcHH-HHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEEC-cHHHHHHHH
Confidence 5899999887 9999999999887 78888 6642 234456788999999995 331 11
Q ss_pred --CCCcCCCcEEEEe
Q 024306 195 --GSWLKPGAVVLDV 207 (269)
Q Consensus 195 --~~~~~~g~vViDv 207 (269)
...++++.+||.+
T Consensus 80 ~l~~~~~~~~~iIs~ 94 (266)
T PLN02688 80 ELRPLLSKDKLLVSV 94 (266)
T ss_pred HHHhhcCCCCEEEEe
Confidence 1234566666655
No 218
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.0084 Score=52.98 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=33.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++++++|.|+++.+|+.++..|+++|++|+++.|.
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 3678999999998888999999999999999998765
No 219
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.11 E-value=0.013 Score=53.61 Aligned_cols=70 Identities=17% Similarity=0.302 Sum_probs=52.7
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------CCHhhhcCCCCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
+|.|||.|.+ |.+++..|++.|.+|+++++.. .+..+.++++|+||.+++.
T Consensus 3 kI~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~ 81 (325)
T PRK00094 3 KIAVLGAGSW-GTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVPS 81 (325)
T ss_pred EEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCCH
Confidence 6999999886 9999999999999999997641 1233456789999999985
Q ss_pred CC---ccc--CCCcCCCcEEEEee
Q 024306 190 AN---LVR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 190 p~---~i~--~~~~~~g~vViDv~ 208 (269)
.. .+. ...++++++++++.
T Consensus 82 ~~~~~v~~~l~~~~~~~~~vi~~~ 105 (325)
T PRK00094 82 QALREVLKQLKPLLPPDAPIVWAT 105 (325)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEEe
Confidence 32 111 12457788999984
No 220
>PRK07200 aspartate/ornithine carbamoyltransferase family protein; Validated
Probab=96.08 E-value=0.14 Score=49.06 Aligned_cols=151 Identities=16% Similarity=0.118 Sum_probs=96.3
Q ss_pred HHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCcCEEEEeCCC---CCCCCHHHHHhcCCcc--ccc-cccc
Q 024306 28 NKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPL---PQHLDEGKILDAVSLE--KDV-DGFH 99 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~--~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl---~~~~~~~~i~~~i~p~--kdv-dg~~ 99 (269)
+-..++.++|.++.++.-... ..-|-+.+.++-|+.- +|+|.+-.|. ..+-...++.+...-. ++| -..-
T Consensus 76 SFE~A~~~LGg~~i~l~~~~ss~~kGEsl~DTarvLs~y--~D~IviR~~~~~g~~~~~~~ela~~~~~~~~~~~~~~~p 153 (395)
T PRK07200 76 SYASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFM--ADVIGIRDDMYIGKGNAYMREVGAAVDDGYKQGVLPQRP 153 (395)
T ss_pred HHHHHHHHcCCCEEEcCCccccCCCCCCHHHHHHHHHHh--CCEEEEecCcccccccHHHHHHHHHhhhhcccccccCCC
Confidence 456789999999988753221 0135677788878773 8899999875 2222112222221100 011 0111
Q ss_pred -cceecccccCCCCCccccCCHHH-HHHHHHHhCC--CCccceEEEEcC-------CcccHHHHHHHHHhCCCEEEEEeC
Q 024306 100 -PLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV--EIMGKNAVVIGR-------SNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 100 -~~n~g~l~~g~~~~~~~p~t~~g-~~~~l~~~~~--~l~gk~v~ViG~-------gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.+|.+ .+...||=+.+ ++.+.++.|- .++|++|+++|. +..|.+.++.++...|++|++++.
T Consensus 154 PVINa~-------~~~~HPtQaLaDl~TI~E~~G~~~~l~g~kVaivg~~~~~~g~~~~Va~Sl~~~~~~lG~~v~~~~P 226 (395)
T PRK07200 154 TLVNLQ-------CDIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHP 226 (395)
T ss_pred eEEECC-------CCCCCcHHHHHHHHHHHHHhCCCcccCCCEEEEEeccccccCCcchHHHHHHHHHHHcCCEEEEECC
Confidence 24541 23466887777 5556566654 389999999964 446689999999999999999864
Q ss_pred C-------------------------CCCHhhhcCCCCEEEecc
Q 024306 169 L-------------------------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 169 ~-------------------------t~~l~~~~~~aDiVIsAt 187 (269)
. +.++.+.+++||+|.+-+
T Consensus 227 ~~~~~~~~i~~~a~~~~~~~G~~i~~~~d~~eav~~aDvVYtd~ 270 (395)
T PRK07200 227 EGYDLMPEVVEVAKKNAKASGGSFRQVNSMEEAFKDADIVYPKS 270 (395)
T ss_pred CccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 3 135678899999999753
No 221
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.04 E-value=0.01 Score=53.06 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=30.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEe
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 167 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~ 167 (269)
.++.++|+|+|.||. |..++..|+..|. ++++++
T Consensus 29 ~L~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD 63 (245)
T PRK05690 29 KLKAARVLVVGLGGL-GCAASQYLAAAGVGTLTLVD 63 (245)
T ss_pred HhcCCeEEEECCCHH-HHHHHHHHHHcCCCEEEEEc
Confidence 468899999999996 9999999999996 688884
No 222
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=96.02 E-value=0.019 Score=51.81 Aligned_cols=54 Identities=17% Similarity=0.174 Sum_probs=44.1
Q ss_pred ccccCCHHHHHHHH----HHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE-EEeC
Q 024306 114 LFIPCTPKGCIELL----IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHA 168 (269)
Q Consensus 114 ~~~p~t~~g~~~~l----~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vt-i~~~ 168 (269)
+--+.|++|+...+ ++.+.+++|++|+|-|.|.+ |+.+++.|.++|++|+ |+++
T Consensus 12 gR~~aTg~Gv~~~~~~~~~~~~~~l~g~~vaIqGfGnV-G~~~a~~L~e~GakvvaVsD~ 70 (254)
T cd05313 12 IRPEATGYGLVYFVEEMLKDRNETLKGKRVAISGSGNV-AQYAAEKLLELGAKVVTLSDS 70 (254)
T ss_pred CCCchhHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECC
Confidence 33477888876555 45678999999999999885 9999999999999866 7764
No 223
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.0089 Score=51.40 Aligned_cols=38 Identities=21% Similarity=0.251 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.++||+++|.|+++.+|+.+++.|+++|++|.++.|+.
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~ 41 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGA 41 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCCh
Confidence 36799999999999999999999999999999988753
No 224
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.00 E-value=0.013 Score=57.09 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=33.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
..+.+|+|+|+|.|++ |+++++.|.++|++|+++++..
T Consensus 11 ~~~~~~~v~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~~ 48 (473)
T PRK00141 11 PQELSGRVLVAGAGVS-GRGIAAMLSELGCDVVVADDNE 48 (473)
T ss_pred ccccCCeEEEEccCHH-HHHHHHHHHHCCCEEEEECCCh
Confidence 3468899999999998 9999999999999999998653
No 225
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.00 E-value=0.015 Score=49.96 Aligned_cols=54 Identities=19% Similarity=0.137 Sum_probs=44.6
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhcCCCCEEEeccCCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~~~~aDiVIsAtg~p 190 (269)
.++.|||++|-+|..++.-+.++|.+||.+-|+. ..+.+.+...|+||+|.|..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 4789999999999999999999999999887652 12346678889999999853
No 226
>PLN02712 arogenate dehydrogenase
Probab=96.00 E-value=0.013 Score=59.81 Aligned_cols=75 Identities=19% Similarity=0.250 Sum_probs=55.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhc-CCCCEEEeccCC---CCccc--
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQIT-SEADIVIAAAGV---ANLVR-- 194 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~-~~aDiVIsAtg~---p~~i~-- 194 (269)
-+.++|.|||.|.+ |..++..|.+.|.+|+++++.. .+..+.+ .+||+||-+++. ...+.
T Consensus 50 ~~~~kIgIIG~G~m-G~slA~~L~~~G~~V~~~dr~~~~~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~l 128 (667)
T PLN02712 50 TTQLKIAIIGFGNY-GQFLAKTLISQGHTVLAHSRSDHSLAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKSL 128 (667)
T ss_pred CCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHhh
Confidence 34578999999886 9999999999998998887652 1233333 469999999983 22222
Q ss_pred -CCCcCCCcEEEEeee
Q 024306 195 -GSWLKPGAVVLDVGT 209 (269)
Q Consensus 195 -~~~~~~g~vViDv~~ 209 (269)
...++++++|+|++.
T Consensus 129 ~~~~l~~g~iVvDv~S 144 (667)
T PLN02712 129 PLQRLKRNTLFVDVLS 144 (667)
T ss_pred hhhcCCCCeEEEECCC
Confidence 234688999999974
No 227
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.99 E-value=0.0088 Score=52.53 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++.+|+.+++.|+++|++|.++.|+
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~ 43 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRD 43 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence 5789999999998888999999999999999988765
No 228
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.98 E-value=0.016 Score=55.75 Aligned_cols=38 Identities=24% Similarity=0.297 Sum_probs=34.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..++||+++|.|+++.+|++++..|.++|++|.++.++
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~ 211 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSN 211 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999889999999999999999888765
No 229
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.94 E-value=0.018 Score=55.84 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=32.3
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+.+|+|+|+|.|+. |++++..|.++|++|+++.+.
T Consensus 12 ~~~~~i~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~ 46 (458)
T PRK01710 12 IKNKKVAVVGIGVS-NIPLIKFLVKLGAKVTAFDKK 46 (458)
T ss_pred hcCCeEEEEcccHH-HHHHHHHHHHCCCEEEEECCC
Confidence 46899999999998 999999999999999999864
No 230
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.94 E-value=0.013 Score=51.21 Aligned_cols=35 Identities=14% Similarity=0.278 Sum_probs=30.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~ 168 (269)
.++.++|+|+|+||. |..+++.|+..|. ++++++.
T Consensus 25 ~L~~~~V~ViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~ 60 (212)
T PRK08644 25 KLKKAKVGIAGAGGL-GSNIAVALARSGVGNLKLVDF 60 (212)
T ss_pred HHhCCCEEEECcCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 367899999999997 9999999999997 5888853
No 231
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.93 E-value=0.012 Score=51.21 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++.+|+++++.|+++|++|.++.|.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~ 38 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence 5789999999998888999999999999998888664
No 232
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.93 E-value=0.02 Score=50.66 Aligned_cols=37 Identities=27% Similarity=0.258 Sum_probs=33.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.+++.|+++|++|.++.++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~ 42 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH 42 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998888999999999999998887654
No 233
>PTZ00117 malate dehydrogenase; Provisional
Probab=95.92 E-value=0.026 Score=52.43 Aligned_cols=55 Identities=24% Similarity=0.449 Sum_probs=43.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCC--------------------------CCHhhhcCCCCEEEec
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT--------------------------KNPEQITSEADIVIAA 186 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t--------------------------~~l~~~~~~aDiVIsA 186 (269)
.+.++|.|||+|. ||..+++.|+..| +++.+++... .++ +.+++||+||.+
T Consensus 3 ~~~~KI~IIGaG~-vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~-~~l~~ADiVVit 80 (319)
T PTZ00117 3 VKRKKISMIGAGQ-IGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNY-EDIKDSDVVVIT 80 (319)
T ss_pred CCCcEEEEECCCH-HHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCH-HHhCCCCEEEEC
Confidence 4678999999966 5999999999888 6787775431 233 478999999999
Q ss_pred cCCC
Q 024306 187 AGVA 190 (269)
Q Consensus 187 tg~p 190 (269)
.|.|
T Consensus 81 ag~~ 84 (319)
T PTZ00117 81 AGVQ 84 (319)
T ss_pred CCCC
Confidence 9753
No 234
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.014 Score=52.96 Aligned_cols=39 Identities=28% Similarity=0.344 Sum_probs=34.6
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
...+++|+++|.|+++-+|+.++..|+++|++|.++.|+
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARR 73 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 456789999999998888999999999999999998775
No 235
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.0085 Score=52.45 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=34.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++||+++|.|+|.-+|++++..|+++|++|.++.|+.
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~ 39 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQ 39 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 47899999999999899999999999999999987764
No 236
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.89 E-value=0.015 Score=56.93 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=31.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..|++|+|+|.|.+ |++++..|..+|++|+++.+.
T Consensus 10 ~~~~~v~V~G~G~s-G~aa~~~L~~~G~~v~~~D~~ 44 (488)
T PRK03369 10 LPGAPVLVAGAGVT-GRAVLAALTRFGARPTVCDDD 44 (488)
T ss_pred cCCCeEEEEcCCHH-HHHHHHHHHHCCCEEEEEcCC
Confidence 36899999999998 999999999999999998754
No 237
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.89 E-value=0.015 Score=53.21 Aligned_cols=51 Identities=14% Similarity=0.068 Sum_probs=42.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------CCHhhhcCCCCEEEeccC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAAG 188 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------------~~l~~~~~~aDiVIsAtg 188 (269)
+|+|+|++|.+|+.++..|.++|.+|+++.|+. .++.+.++.+|+||++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence 699999999999999999999999999887652 123456788899998765
No 238
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=95.87 E-value=0.019 Score=53.26 Aligned_cols=55 Identities=20% Similarity=0.299 Sum_probs=43.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCCC-----------------------CHhhhcCCCCEEEeccCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK-----------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t~-----------------------~l~~~~~~aDiVIsAtg~ 189 (269)
.+++|.|||+|. ||.+++..|+.++. ++.+++.... +-.+.+++||+||.+.|.
T Consensus 5 ~~~ki~iiGaG~-vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~ 83 (315)
T PRK00066 5 QHNKVVLVGDGA-VGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGA 83 (315)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCC
Confidence 578999999977 59999999998885 5888865421 113568999999999986
Q ss_pred C
Q 024306 190 A 190 (269)
Q Consensus 190 p 190 (269)
|
T Consensus 84 ~ 84 (315)
T PRK00066 84 P 84 (315)
T ss_pred C
Confidence 4
No 239
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.86 E-value=0.012 Score=55.73 Aligned_cols=35 Identities=26% Similarity=0.506 Sum_probs=31.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~ 168 (269)
.+++++|+|+|.||. |..++..|+..|. ++++++.
T Consensus 132 ~l~~~~VlvvG~GG~-Gs~ia~~La~~Gvg~i~lvD~ 167 (376)
T PRK08762 132 RLLEARVLLIGAGGL-GSPAALYLAAAGVGTLGIVDH 167 (376)
T ss_pred HHhcCcEEEECCCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 368999999999997 9999999999997 6888854
No 240
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.85 E-value=0.0088 Score=48.14 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=28.8
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~ 169 (269)
+.++|+|+|.|+. |..++..|+..|. ++++++..
T Consensus 1 r~~~v~iiG~G~v-Gs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 1 RNKRVLIIGAGGV-GSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp HT-EEEEESTSHH-HHHHHHHHHHHTTSEEEEEESS
T ss_pred CCCEEEEECcCHH-HHHHHHHHHHhCCCceeecCCc
Confidence 3689999999996 9999999999998 69999543
No 241
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.84 E-value=0.0099 Score=51.69 Aligned_cols=38 Identities=24% Similarity=0.245 Sum_probs=34.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
++++++++|+|+++.+|+.+++.|+++|++|+++.|+.
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~ 39 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE 39 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36889999999998899999999999999999987764
No 242
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.83 E-value=0.019 Score=52.55 Aligned_cols=52 Identities=25% Similarity=0.369 Sum_probs=42.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------------------CCHhhhcCCCCEE
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------KNPEQITSEADIV 183 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------------------------~~l~~~~~~aDiV 183 (269)
++|.|||+|.+ |.+++..|++.|.+|+++++.. .++.+.+++||+|
T Consensus 5 ~~I~vIGaG~m-G~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlV 83 (311)
T PRK06130 5 QNLAIIGAGTM-GSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLV 83 (311)
T ss_pred cEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEE
Confidence 67999999886 9999999999999999987532 1233457889999
Q ss_pred EeccCC
Q 024306 184 IAAAGV 189 (269)
Q Consensus 184 IsAtg~ 189 (269)
|.+++.
T Consensus 84 i~av~~ 89 (311)
T PRK06130 84 IEAVPE 89 (311)
T ss_pred EEeccC
Confidence 999874
No 243
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.82 E-value=0.0092 Score=52.36 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=34.8
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..++||+++|.|+++.+|+.++..|+++|++|+++.|+
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~ 44 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRN 44 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCC
Confidence 45789999999999999999999999999999998775
No 244
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=95.81 E-value=0.026 Score=54.70 Aligned_cols=122 Identities=21% Similarity=0.152 Sum_probs=68.0
Q ss_pred CccceEEEEcCCcccHHH-HHHHHHhCCCEEEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcC-CCcEEEEeeecC
Q 024306 134 IMGKNAVVIGRSNIVGLP-TSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCP 211 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~-~a~~L~~~ga~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~-~g~vViDv~~~~ 211 (269)
.++|+++|+|.|++ |++ +|+.|.++|++|++++.......+.+++..+.+.. |.+ ++.+. ...+|+--++++
T Consensus 5 ~~~~~v~viG~G~s-G~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~-~~~----~~~~~~~d~vv~spgi~~ 78 (461)
T PRK00421 5 RRIKRIHFVGIGGI-GMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFI-GHD----AENIKDADVVVYSSAIPD 78 (461)
T ss_pred CCCCEEEEEEEchh-hHHHHHHHHHhCCCeEEEECCCCChHHHHHHHCCCEEeC-CCC----HHHCCCCCEEEECCCCCC
Confidence 46789999999998 999 79999999999999986542221223322332221 211 11111 123333333333
Q ss_pred CCCCC---CCCCceeecccchHH-HhhHcceecccCCcccHHHHHHHHHHHHHHH
Q 024306 212 VDDPS---CEYGYRLMGDVCYEE-AMRLASVITPVPGGVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 212 ~~~~~---~~~~~~l~GDvd~~~-~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~ 262 (269)
....- ...+-+++++.++-. ..+.. .+.-|-|=-|.=|+..|+.+++++.
T Consensus 79 ~~~~~~~a~~~~i~i~~~~e~~~~~~~~~-~~I~ITGTnGKTTTt~ll~~iL~~~ 132 (461)
T PRK00421 79 DNPELVAARELGIPVVRRAEMLAELMRFR-TSIAVAGTHGKTTTTSLLAHVLAEA 132 (461)
T ss_pred CCHHHHHHHHCCCcEEeHHHHHHHHHccC-cEEEEECCCCHHHHHHHHHHHHHhc
Confidence 21000 001125677776532 22111 1223457778999999999998764
No 245
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.80 E-value=0.021 Score=50.38 Aligned_cols=37 Identities=16% Similarity=0.031 Sum_probs=31.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+..+++++|+|++|.+|+.++..|.++|++|+.+.|.
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC
Confidence 4568999999998888999999999999998877553
No 246
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.79 E-value=0.023 Score=51.89 Aligned_cols=32 Identities=16% Similarity=0.242 Sum_probs=28.8
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|.|||+|.+ |..+|..++..|..|++.++.
T Consensus 6 ~~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~ 37 (286)
T PRK07819 6 QRVGVVGAGQM-GAGIAEVCARAGVDVLVFETT 37 (286)
T ss_pred cEEEEEcccHH-HHHHHHHHHhCCCEEEEEECC
Confidence 47999999886 999999999999999999654
No 247
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=95.79 E-value=0.094 Score=49.99 Aligned_cols=124 Identities=22% Similarity=0.255 Sum_probs=84.4
Q ss_pred CCCHHHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhC---------------------------
Q 024306 79 HLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSG--------------------------- 131 (269)
Q Consensus 79 ~~~~~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~--------------------------- 131 (269)
+.|...+.+.|-.++.+.. |..|.|- ||.-.+| |-|..+.+...++++
T Consensus 231 g~D~~~V~~gIGlD~RIG~-~fl~aG~---GyGGsCf-PKD~~AL~~~a~~~~~~~~ll~avv~vN~~qk~~~~~~i~~~ 305 (414)
T COG1004 231 GADVKQVAEGIGLDPRIGN-HFLNAGF---GYGGSCF-PKDTKALIANAEELGYDPNLLEAVVEVNERRKDKLAEKILNH 305 (414)
T ss_pred CCCHHHHHHHcCCCchhhH-hhCCCCC---CCCCcCC-cHhHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4467888888887777653 4445443 3333344 667677666665544
Q ss_pred CCCccceEEEEcCC---------cccHHHHHHHHHhCCCEEEEEeCC--------------CCCHhhhcCCCCEEEeccC
Q 024306 132 VEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHAL--------------TKNPEQITSEADIVIAAAG 188 (269)
Q Consensus 132 ~~l~gk~v~ViG~g---------g~vg~~~a~~L~~~ga~Vti~~~~--------------t~~l~~~~~~aDiVIsAtg 188 (269)
..++||+|.|+|-. .+-...++.+|..+||+|.+.... ..+..+.+++||++|..|.
T Consensus 306 ~~l~Gk~iavlgLafKpnTDD~ReSpa~~vi~~L~~~Ga~V~aYDP~a~~~~~~~~~~~~~~~~~~~~~~~aDaivi~te 385 (414)
T COG1004 306 LGLKGKTIAVLGLAFKPNTDDMRESPALDIIKRLQEKGAEVIAYDPVAMENAFRNFPDVELESDAEEALKGADAIVINTE 385 (414)
T ss_pred cCCCCcEEEEEEEeecCCCccchhchHHHHHHHHHHCCCEEEEECchhhHHHHhcCCCceEeCCHHHHHhhCCEEEEecc
Confidence 23789999999922 223789999999999999998543 2467788999999999999
Q ss_pred CCCcccCCC---cCCCcEEEEe
Q 024306 189 VANLVRGSW---LKPGAVVLDV 207 (269)
Q Consensus 189 ~p~~i~~~~---~~~g~vViDv 207 (269)
...|-..++ +-++.+|+|.
T Consensus 386 w~ef~~~d~~~~~m~~~~v~Dg 407 (414)
T COG1004 386 WDEFRDLDFEKLLMKTPVVIDG 407 (414)
T ss_pred HHHHhccChhhhhccCCEEEec
Confidence 766644332 2245567773
No 248
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.78 E-value=0.0082 Score=55.24 Aligned_cols=90 Identities=24% Similarity=0.292 Sum_probs=64.1
Q ss_pred HHHHHHHHH----------hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC---------------------
Q 024306 121 KGCIELLIR----------SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL--------------------- 169 (269)
Q Consensus 121 ~g~~~~l~~----------~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~--------------------- 169 (269)
.+++..+.+ .+...++.+++++|.|-+ |-.++..-...|+-|+-..-.
T Consensus 139 ~aVi~Aa~a~~rffpm~~TAagtv~pA~vlv~G~Gva-gl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee 217 (356)
T COG3288 139 IAVIGAALAYGRFFPMQITAAGTVSPAKVLVIGAGVA-GLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEE 217 (356)
T ss_pred HHHHHHHHHhhhcccchhhhcccccchhhhhhhHHHH-HHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccc
Confidence 556666666 345678899999999776 877776666667766654211
Q ss_pred ---------C--------CCHhhhcCCCCEEEeccC-----CCCcccCCCc---CCCcEEEEeeecC
Q 024306 170 ---------T--------KNPEQITSEADIVIAAAG-----VANLVRGSWL---KPGAVVLDVGTCP 211 (269)
Q Consensus 170 ---------t--------~~l~~~~~~aDiVIsAtg-----~p~~i~~~~~---~~g~vViDv~~~~ 211 (269)
+ +-+.+..++.||||++.= .|.+++.+|+ |||.+|+|++...
T Consensus 218 ~~gGYAk~ms~~~~~~q~~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~ 284 (356)
T COG3288 218 SAGGYAKEMSEEFIAKQAELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAET 284 (356)
T ss_pred cCCCccccCCHHHHHHHHHHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhc
Confidence 0 123578899999998773 3557899885 8999999998643
No 249
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.78 E-value=0.014 Score=51.46 Aligned_cols=52 Identities=23% Similarity=0.338 Sum_probs=42.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------------------CCHhhh-cCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------------KNPEQI-TSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-----------------------~~l~~~-~~~aDiVIsAtg~ 189 (269)
++++|+|+|.. |..+|+.|.++|.+|++..+.. .-|.++ +.+||++|.+||.
T Consensus 1 m~iiIiG~G~v-G~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGAGRV-GRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECCcHH-HHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 57999999996 9999999999999999886542 113333 7889999999985
No 250
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=95.78 E-value=0.054 Score=50.96 Aligned_cols=76 Identities=20% Similarity=0.274 Sum_probs=52.5
Q ss_pred ccCCHHHHHHHHHHhC------CCCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCC------------------C
Q 024306 116 IPCTPKGCIELLIRSG------VEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHAL------------------T 170 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~------~~l~gk~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~------------------t 170 (269)
+|.++.-.++.|-+.. -.-+|+.|+|+|+|+.||..+++.+...+ +.|+.+.+. +
T Consensus 132 ~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~ 211 (347)
T KOG1198|consen 132 LPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKD 211 (347)
T ss_pred CchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCC
Confidence 4555555555555555 44579999999999999999999999999 555544332 1
Q ss_pred CCHhhhcCC-----CCEEEeccCCCC
Q 024306 171 KNPEQITSE-----ADIVIAAAGVAN 191 (269)
Q Consensus 171 ~~l~~~~~~-----aDiVIsAtg~p~ 191 (269)
.+..+.++. .|+|+.++|.+.
T Consensus 212 ~~~~e~~kk~~~~~~DvVlD~vg~~~ 237 (347)
T KOG1198|consen 212 ENVVELIKKYTGKGVDVVLDCVGGST 237 (347)
T ss_pred HHHHHHHHhhcCCCccEEEECCCCCc
Confidence 233344444 799999988753
No 251
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=95.78 E-value=0.032 Score=51.93 Aligned_cols=55 Identities=25% Similarity=0.381 Sum_probs=43.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------------CCHhhhcCCCCEEEec
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAA 186 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t--------------------------~~l~~~~~~aDiVIsA 186 (269)
++.++|.|||+|.+ |..++..++..|. +|.+.+... .++ +.+++||+||.+
T Consensus 4 ~~~~KI~IIGaG~v-G~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~t 81 (321)
T PTZ00082 4 IKRRKISLIGSGNI-GGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVT 81 (321)
T ss_pred CCCCEEEEECCCHH-HHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEEC
Confidence 45579999999775 9999999998884 777775431 233 578999999999
Q ss_pred cCCC
Q 024306 187 AGVA 190 (269)
Q Consensus 187 tg~p 190 (269)
.|.|
T Consensus 82 ag~~ 85 (321)
T PTZ00082 82 AGLT 85 (321)
T ss_pred CCCC
Confidence 9864
No 252
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.76 E-value=0.0054 Score=57.96 Aligned_cols=112 Identities=21% Similarity=0.256 Sum_probs=68.2
Q ss_pred EEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC-------------------------CCHhhhcCCCCEEEeccCCCC
Q 024306 139 AVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------------KNPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 139 v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t-------------------------~~l~~~~~~aDiVIsAtg~p~ 191 (269)
|+|+|+ |.+|++++..|++++- +|++..|+. .++.+.++++|+||+++|...
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 689999 5569999999998874 799997752 125678999999999998531
Q ss_pred -c-ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHH
Q 024306 192 -L-VRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 263 (269)
Q Consensus 192 -~-i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~ 263 (269)
. +-...++.|.-.+|..+-. ...-.. ++.+++++..-=+-=|.-|--+.+|...+++.+.
T Consensus 80 ~~~v~~~~i~~g~~yvD~~~~~----------~~~~~l--~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~ 141 (386)
T PF03435_consen 80 GEPVARACIEAGVHYVDTSYVT----------EEMLAL--DEEAKEAGVTALPGCGFDPGLSNLLARYAADELD 141 (386)
T ss_dssp HHHHHHHHHHHT-EEEESS-HH----------HHHHHC--HHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCeeccchhH----------HHHHHH--HHHHHhhCCEEEeCcccccchHHHHHHHHHHHhh
Confidence 1 3334566788899965411 111111 2334444432211336667778888888887765
No 253
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.75 E-value=0.094 Score=52.04 Aligned_cols=135 Identities=20% Similarity=0.295 Sum_probs=88.1
Q ss_pred HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceeccccc
Q 024306 29 KIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAM 108 (269)
Q Consensus 29 ~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~l~~ 108 (269)
.....++.+++-..+..| +.+++++.+.++.++.. |+.|.. +|. ...+.+.....++++- --|.
T Consensus 169 i~~~v~~~~~~~iiiAip-s~~~~~~~~i~~~l~~~----~~~v~~-lP~---~~~l~~~~~~lreI~i------eDLL- 232 (588)
T COG1086 169 IERVVEELGIQLILIAIP-SASQEERRRILLRLART----GIAVRI-LPQ---LTDLKDLNGQLREIEI------EDLL- 232 (588)
T ss_pred HHHHHHHcCCceEEEecC-CCCHHHHHHHHHHHHhc----CCcEEe-cCc---HHHHHHhccccccCCH------HHHh-
Confidence 566888999998878877 46889999999999884 343332 221 2445553433444332 1122
Q ss_pred CCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC-----------------
Q 024306 109 RGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT----------------- 170 (269)
Q Consensus 109 g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t----------------- 170 (269)
| ++ -++.+...+... +.||+|+|-|+||++|+.+++.+++.++ ++.++.+..
T Consensus 233 g--R~-pV~~d~~~i~~~-------~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~ 302 (588)
T COG1086 233 G--RP-PVALDTELIGAM-------LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPEL 302 (588)
T ss_pred C--CC-CCCCCHHHHHhH-------cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCc
Confidence 3 11 123343333333 5899999999999999999999999997 577775541
Q ss_pred ------------CCHhhhcCC--CCEEEeccCC
Q 024306 171 ------------KNPEQITSE--ADIVIAAAGV 189 (269)
Q Consensus 171 ------------~~l~~~~~~--aDiVIsAtg~ 189 (269)
..+...+++ -|+|+.|.-.
T Consensus 303 ~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~ 335 (588)
T COG1086 303 KLRFYIGDVRDRDRVERAMEGHKVDIVFHAAAL 335 (588)
T ss_pred ceEEEecccccHHHHHHHHhcCCCceEEEhhhh
Confidence 123455666 8999988874
No 254
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.75 E-value=0.011 Score=52.01 Aligned_cols=37 Identities=22% Similarity=0.280 Sum_probs=34.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~ 42 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDIT 42 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC
Confidence 4789999999999989999999999999999988765
No 255
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=95.74 E-value=0.024 Score=50.86 Aligned_cols=52 Identities=29% Similarity=0.367 Sum_probs=41.1
Q ss_pred EEEEcCCcccHHHHHHHHHhCC----CEEEEEeCC-------------------------CCCHhhhcCCCCEEEeccCC
Q 024306 139 AVVIGRSNIVGLPTSLLLQRHH----ATVSIVHAL-------------------------TKNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 139 v~ViG~gg~vg~~~a~~L~~~g----a~Vti~~~~-------------------------t~~l~~~~~~aDiVIsAtg~ 189 (269)
|+|||+||.+|..++..|+..+ .++.+.+.. +.++.+.+++||+||.+.|.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799997778999999999888 468887543 13446788999999998886
Q ss_pred C
Q 024306 190 A 190 (269)
Q Consensus 190 p 190 (269)
|
T Consensus 81 ~ 81 (263)
T cd00650 81 G 81 (263)
T ss_pred C
Confidence 4
No 256
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.01 Score=51.91 Aligned_cols=37 Identities=30% Similarity=0.358 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++.+|+.+++.|+++|++|.++.|+
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~ 40 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRD 40 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4689999999999999999999999999999888775
No 257
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=95.74 E-value=0.095 Score=51.37 Aligned_cols=154 Identities=16% Similarity=0.091 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCC------CCCHHHHHhcCCccc----
Q 024306 24 TYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQ------HLDEGKILDAVSLEK---- 93 (269)
Q Consensus 24 ~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~------~~~~~~i~~~i~p~k---- 93 (269)
+|.+-..+.|+++|+ ++.+.++.++.|+.+ |.....|=+. ..|...+........
T Consensus 228 af~NEla~lce~~gi--------------D~~eV~~~~~~d~ri-g~~~l~PG~G~GG~ClpkD~~~L~~~a~~~g~~~~ 292 (473)
T PLN02353 228 SSVNAMSALCEATGA--------------DVSQVSHAVGKDSRI-GPKFLNASVGFGGSCFQKDILNLVYICECNGLPEV 292 (473)
T ss_pred HHHHHHHHHHHHhCC--------------CHHHHHHHhCCCCcC-CCCCCCCCCCCCCcchhhhHHHHHHHHHHcCCchH
Q ss_pred --cccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEc----------CCcccHHHHHHHHHhCCC
Q 024306 94 --DVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIG----------RSNIVGLPTSLLLQRHHA 161 (269)
Q Consensus 94 --dvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG----------~gg~vg~~~a~~L~~~ga 161 (269)
-++.+..+|..+-. .-+-++.+...-+++|++|+|+| |.-. +..++..|.++|+
T Consensus 293 ~~l~~~~~~iN~~~~~-------------~vv~~~~~~l~~~~~~~~VavlGlafK~~tdD~R~Sp-a~~li~~L~~~G~ 358 (473)
T PLN02353 293 AEYWKQVIKMNDYQKS-------------RFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETP-AIDVCKGLLGDKA 358 (473)
T ss_pred HHHHHHHHHHHHhhHH-------------HHHHHHHHHhhcccCCCEEEEEeeeecCCCCccccCh-HHHHHHHHHhCCC
Q ss_pred EEEEEeCC------------------------------------CCCHhhhcCCCCEEEeccCCCCc--cc----CCCcC
Q 024306 162 TVSIVHAL------------------------------------TKNPEQITSEADIVIAAAGVANL--VR----GSWLK 199 (269)
Q Consensus 162 ~Vti~~~~------------------------------------t~~l~~~~~~aDiVIsAtg~p~~--i~----~~~~~ 199 (269)
+|.+.... ..++.+.+++||+||.+|..+.+ ++ .+.++
T Consensus 359 ~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~vvi~t~~~ef~~l~~~~~~~~m~ 438 (473)
T PLN02353 359 KLSIYDPQVTEEQIQRDLSMNKFDWDHPRHLQPMSPTAVKQVSVVWDAYEATKGAHGICILTEWDEFKTLDYQKIYDNMQ 438 (473)
T ss_pred EEEEECCCCChHHHHHHhhcccccccccccccccccccccceeeeCCHHHHhcCCCEEEECCCChHhcccCHHHHHHhcc
Q ss_pred CCcEEEE
Q 024306 200 PGAVVLD 206 (269)
Q Consensus 200 ~g~vViD 206 (269)
+..+|+|
T Consensus 439 ~~~~viD 445 (473)
T PLN02353 439 KPAFVFD 445 (473)
T ss_pred CCCEEEE
No 258
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=95.73 E-value=0.016 Score=52.82 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=29.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|.|||.|.+ |.++|..|+..|.+|++++++
T Consensus 5 ~~V~vIG~G~m-G~~iA~~l~~~G~~V~~~d~~ 36 (295)
T PLN02545 5 KKVGVVGAGQM-GSGIAQLAAAAGMDVWLLDSD 36 (295)
T ss_pred CEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCC
Confidence 67999999887 999999999999999999764
No 259
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=95.72 E-value=0.013 Score=50.13 Aligned_cols=53 Identities=26% Similarity=0.309 Sum_probs=35.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC----------------------------------CCCHhhhcCCCCE
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------------TKNPEQITSEADI 182 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~----------------------------------t~~l~~~~~~aDi 182 (269)
++|.|+|.|-. |-++|..|++.|.+|+-+... +.+..+.+++||+
T Consensus 1 M~I~ViGlGyv-Gl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIGLGYV-GLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE--STT-HHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEECCCcc-hHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 47999999886 999999999999999999543 1234566788888
Q ss_pred EEeccCCC
Q 024306 183 VIAAAGVA 190 (269)
Q Consensus 183 VIsAtg~p 190 (269)
+|-++|.|
T Consensus 80 ~~I~VpTP 87 (185)
T PF03721_consen 80 VFICVPTP 87 (185)
T ss_dssp EEE----E
T ss_pred EEEecCCC
Confidence 88888754
No 260
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.017 Score=50.81 Aligned_cols=39 Identities=23% Similarity=0.248 Sum_probs=34.5
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++++||+++|.|+++.+|+.+++.|+++|++|.++.+.
T Consensus 2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~ 40 (258)
T PRK08628 2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS 40 (258)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC
Confidence 367899999999999889999999999999998877654
No 261
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.71 E-value=0.029 Score=52.27 Aligned_cols=51 Identities=22% Similarity=0.149 Sum_probs=43.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC----------------------------------CCCHhhhcCCCCE
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------------TKNPEQITSEADI 182 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~----------------------------------t~~l~~~~~~aDi 182 (269)
++|.|||+|-+ |..+|..++..|.+|++.++. +.++.+.+.+||+
T Consensus 8 ~~VaVIGaG~M-G~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl 86 (321)
T PRK07066 8 KTFAAIGSGVI-GSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF 86 (321)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence 68999999886 999999999999999998653 1245577899999
Q ss_pred EEeccC
Q 024306 183 VIAAAG 188 (269)
Q Consensus 183 VIsAtg 188 (269)
||.+++
T Consensus 87 ViEavp 92 (321)
T PRK07066 87 IQESAP 92 (321)
T ss_pred EEECCc
Confidence 999987
No 262
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=95.69 E-value=0.017 Score=54.78 Aligned_cols=34 Identities=21% Similarity=0.434 Sum_probs=30.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEe
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 167 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~ 167 (269)
.+++++|+|+|+||. |.+++..|+..|. ++++++
T Consensus 38 ~l~~~~VliiG~Ggl-G~~v~~~La~~Gvg~i~ivD 72 (370)
T PRK05600 38 RLHNARVLVIGAGGL-GCPAMQSLASAGVGTITLID 72 (370)
T ss_pred HhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEe
Confidence 467899999999997 9999999999996 799984
No 263
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.014 Score=51.95 Aligned_cols=38 Identities=24% Similarity=0.322 Sum_probs=33.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||.++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999998878999999999999999998765
No 264
>PLN02477 glutamate dehydrogenase
Probab=95.68 E-value=0.028 Score=54.10 Aligned_cols=159 Identities=16% Similarity=0.179 Sum_probs=83.2
Q ss_pred CeEEEEEeCCCc---chHHHHHHHHHHHHHcCCeE-----EEEEcCCCCCHHHHHHHHHhhhcC-CCcCEEEEeCCCCCC
Q 024306 9 PGLAVILVGERR---DSQTYVRNKIKACEEVGIKS-----IVTEFADGCTEDEVLNALSNYNQD-SSINGILVQLPLPQH 79 (269)
Q Consensus 9 p~L~~i~vg~~~---~s~~y~~~~~~~~~~~Gi~~-----~~~~~~~~~~~~~l~~~i~~ln~d-~~v~Gi~V~~Pl~~~ 79 (269)
|...-+|.-... .....+..+.--|.-.|+.+ ....=|.+.++.|++...+.+-.- ..+.|-..-+|=|.-
T Consensus 64 P~kGGiR~~p~v~~~ev~~La~~MT~K~Al~~lP~GGgKggI~~dP~~~s~~e~e~l~r~f~~~l~~~iG~~~DipapDv 143 (410)
T PLN02477 64 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCDPRDLSESELERLTRVFTQKIHDLIGIHTDVPAPDM 143 (410)
T ss_pred CCCCCeeecCCCCHHHHHHHHHHHHHHHHhcCCCCcCceeeeccCCccCCHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Confidence 555555553322 22344555555555565544 222224444556666555544321 123444433454442
Q ss_pred CCHHHHHhcCC-cccccccccc-ceecc-cccCCCCCccccCCHHHHHHHH----HHhCCCCccceEEEEcCCcccHHHH
Q 024306 80 LDEGKILDAVS-LEKDVDGFHP-LNIGN-LAMRGREPLFIPCTPKGCIELL----IRSGVEIMGKNAVVIGRSNIVGLPT 152 (269)
Q Consensus 80 ~~~~~i~~~i~-p~kdvdg~~~-~n~g~-l~~g~~~~~~~p~t~~g~~~~l----~~~~~~l~gk~v~ViG~gg~vg~~~ 152 (269)
-.....+..+- .-+.+.|.++ +-+|+ +..|. ..+-.+.|++|+...+ ++.+.+++|++|+|.|.|.+ |+.+
T Consensus 144 gt~~~~M~w~~d~y~~~~g~~~~~vtGkp~~~gG-s~~r~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaIqGfGnV-G~~~ 221 (410)
T PLN02477 144 GTNAQTMAWILDEYSKFHGFSPAVVTGKPIDLGG-SLGREAATGRGVVFATEALLAEHGKSIAGQTFVIQGFGNV-GSWA 221 (410)
T ss_pred CCCHHHHHHHHHHHHHhhCCCCceEeCCCcccCC-CCCCCccchHHHHHHHHHHHHHcCCCccCCEEEEECCCHH-HHHH
Confidence 21122333221 1122122110 01221 11111 1223467988875554 55788999999999999885 9999
Q ss_pred HHHHHhCCCEEE-EEeCC
Q 024306 153 SLLLQRHHATVS-IVHAL 169 (269)
Q Consensus 153 a~~L~~~ga~Vt-i~~~~ 169 (269)
++.|.++|++|+ |++++
T Consensus 222 A~~L~e~GakVVaVsD~~ 239 (410)
T PLN02477 222 AQLIHEKGGKIVAVSDIT 239 (410)
T ss_pred HHHHHHcCCEEEEEECCC
Confidence 999999999976 77654
No 265
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.67 E-value=0.018 Score=54.31 Aligned_cols=34 Identities=24% Similarity=0.485 Sum_probs=30.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEe
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 167 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~ 167 (269)
.+++++|+|+|.||. |.+++..|+..|. ++++++
T Consensus 25 ~L~~~~VlivG~GGl-Gs~~a~~La~~Gvg~i~lvD 59 (355)
T PRK05597 25 SLFDAKVAVIGAGGL-GSPALLYLAGAGVGHITIID 59 (355)
T ss_pred HHhCCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEe
Confidence 367899999999997 9999999999996 688884
No 266
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.67 E-value=0.016 Score=50.41 Aligned_cols=51 Identities=14% Similarity=0.044 Sum_probs=42.4
Q ss_pred EEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------------------CCHhhhcCCCCEEEeccCC
Q 024306 139 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 139 v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-----------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
|+|+|+.|.+|++++..|.+.+.+|+++.|.. +.+.+.++.+|.||..++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 68999988899999999999999999998863 1345678888888888874
No 267
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.67 E-value=0.017 Score=52.50 Aligned_cols=32 Identities=25% Similarity=0.292 Sum_probs=29.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|.|||+|.+ |.+++..|++.|.+|++++++
T Consensus 4 ~~I~ViGaG~m-G~~iA~~la~~G~~V~l~d~~ 35 (291)
T PRK06035 4 KVIGVVGSGVM-GQGIAQVFARTGYDVTIVDVS 35 (291)
T ss_pred cEEEEECccHH-HHHHHHHHHhcCCeEEEEeCC
Confidence 67999999886 999999999999999999764
No 268
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.015 Score=50.58 Aligned_cols=37 Identities=27% Similarity=0.389 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++.+|+.++..|+++|++|.++.|+
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~ 38 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD 38 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC
Confidence 4689999999999999999999999999998888665
No 269
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.02 Score=50.11 Aligned_cols=38 Identities=26% Similarity=0.376 Sum_probs=34.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++.+|+.+++.|+++|++|.++.|.
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998888999999999999999888765
No 270
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=95.64 E-value=0.044 Score=50.67 Aligned_cols=85 Identities=15% Similarity=0.196 Sum_probs=57.2
Q ss_pred HHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC-------------------CCHhhhc---CCC
Q 024306 124 IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQIT---SEA 180 (269)
Q Consensus 124 ~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t-------------------~~l~~~~---~~a 180 (269)
...+++.+. ..|++|+|+|+|+ +|..+++++..+|+ .|+++.+.. .++.+.. ...
T Consensus 159 ~~al~~~~~-~~g~~VlV~G~G~-vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~ 236 (343)
T PRK09880 159 IHAAHQAGD-LQGKRVFVSGVGP-IGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYF 236 (343)
T ss_pred HHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCC
Confidence 333444333 4799999999866 59999999999998 576664331 1222222 137
Q ss_pred CEEEeccCCCCcc--cCCCcCCCcEEEEeeec
Q 024306 181 DIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 181 DiVIsAtg~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
|+||.++|.+..+ .-+.++++-.++.+|..
T Consensus 237 D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~ 268 (343)
T PRK09880 237 DVSFEVSGHPSSINTCLEVTRAKGVMVQVGMG 268 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccC
Confidence 9999999976432 23467888888888864
No 271
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.014 Score=51.62 Aligned_cols=38 Identities=37% Similarity=0.433 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||.++|.|+++-+|+.+++.|+++|++|+++.|+
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~ 41 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRD 41 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999999999888999999999999999988765
No 272
>PRK05717 oxidoreductase; Validated
Probab=95.61 E-value=0.02 Score=50.32 Aligned_cols=39 Identities=21% Similarity=0.160 Sum_probs=34.5
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
...++||+++|.|+++.+|+.++..|+++|++|.++.+.
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCC
Confidence 456899999999998889999999999999999888543
No 273
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.61 E-value=0.021 Score=52.59 Aligned_cols=56 Identities=16% Similarity=0.127 Sum_probs=42.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCCC-------------------------CHhhhcCCCCEEEec
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALTK-------------------------NPEQITSEADIVIAA 186 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~g--a~Vti~~~~t~-------------------------~l~~~~~~aDiVIsA 186 (269)
++||+++|.|++|.+|+.++..|+++| ++|+++.+... ++.+.+++.|+||..
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 478999999999989999999999886 67887754321 123445678888877
Q ss_pred cCC
Q 024306 187 AGV 189 (269)
Q Consensus 187 tg~ 189 (269)
.|.
T Consensus 82 Ag~ 84 (324)
T TIGR03589 82 AAL 84 (324)
T ss_pred ccc
Confidence 763
No 274
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.018 Score=50.57 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=34.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++++++++|+|+++.+|+.++..|.++|++|+++.|.
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~ 44 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS 44 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 34789999999999999999999999999999888764
No 275
>PRK14031 glutamate dehydrogenase; Provisional
Probab=95.60 E-value=0.028 Score=54.55 Aligned_cols=52 Identities=23% Similarity=0.241 Sum_probs=43.2
Q ss_pred ccccCCHHHHHHHH----HHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE
Q 024306 114 LFIPCTPKGCIELL----IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 166 (269)
Q Consensus 114 ~~~p~t~~g~~~~l----~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~ 166 (269)
+-.+.|++|++..+ ++.+.+++|++|+|.|.|.+ |..+++.|.+.||+|+.+
T Consensus 202 ~r~~aTg~Gv~~~~~~~~~~~g~~l~g~rVaVQGfGNV-G~~aA~~L~e~GAkVVaV 257 (444)
T PRK14031 202 IRPEATGYGNIYFLMEMLKTKGTDLKGKVCLVSGSGNV-AQYTAEKVLELGGKVVTM 257 (444)
T ss_pred CCCcccHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEE
Confidence 33477999876554 55688999999999999885 999999999999997764
No 276
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=95.59 E-value=0.031 Score=48.84 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=48.5
Q ss_pred eEEEEc-CCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------------CHhhhcCCCCEEEeccCCCC
Q 024306 138 NAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK-------------------------NPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 138 ~v~ViG-~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------------------~l~~~~~~aDiVIsAtg~p~ 191 (269)
+|.||| +|. +|.+++..|.+.|.+|++.+|+.+ +..+.++++|+||.+++...
T Consensus 2 kI~IIGG~G~-mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~~ 80 (219)
T TIGR01915 2 KIAVLGGTGD-QGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWDH 80 (219)
T ss_pred EEEEEcCCCH-HHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHHH
Confidence 689998 565 599999999999999998876531 22345678999999998533
Q ss_pred c---cc--CCCcCCCcEEEEee
Q 024306 192 L---VR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 192 ~---i~--~~~~~~g~vViDv~ 208 (269)
+ +. ...++ +.+|||+.
T Consensus 81 ~~~~l~~l~~~l~-~~vvI~~~ 101 (219)
T TIGR01915 81 VLKTLESLRDELS-GKLVISPV 101 (219)
T ss_pred HHHHHHHHHHhcc-CCEEEEec
Confidence 2 11 11233 47888874
No 277
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.58 E-value=0.036 Score=50.59 Aligned_cols=36 Identities=25% Similarity=0.023 Sum_probs=31.5
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
-.||+|+|.|++|.+|+.++..|.++|.+|+.+.|.
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRD 38 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 358999999999999999999999999998876543
No 278
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.014 Score=51.50 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++||+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998888999999999999999888764
No 279
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.57 E-value=0.018 Score=50.91 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=33.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.+++.|+++|++|.++.|.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 38 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKS 38 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3679999999998888999999999999999988765
No 280
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.017 Score=50.71 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.+++.|+++|++|.++.|.
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARH 42 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 4789999999998878999999999999999988765
No 281
>PRK06057 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.018 Score=50.67 Aligned_cols=36 Identities=31% Similarity=0.353 Sum_probs=33.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||+++|+|+++.+|+.+++.|+++|++|.++.++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~ 40 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDID 40 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 689999999998888999999999999999988765
No 282
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.017 Score=50.56 Aligned_cols=36 Identities=25% Similarity=0.238 Sum_probs=32.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|+++|.|+++.+|+.++..|+++|++|.++.|.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART 38 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 578999999999999999999999999999888764
No 283
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.55 E-value=0.021 Score=53.55 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=31.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~ 168 (269)
.++.++|+|+|+|+. |.+++..|+..|. ++++++.
T Consensus 21 ~L~~~~VlVvG~Ggl-Gs~va~~La~aGvg~i~lvD~ 56 (339)
T PRK07688 21 KLREKHVLIIGAGAL-GTANAEMLVRAGVGKVTIVDR 56 (339)
T ss_pred HhcCCcEEEECCCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 367899999999996 9999999999997 7999854
No 284
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.017 Score=51.21 Aligned_cols=37 Identities=30% Similarity=0.390 Sum_probs=33.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDID 39 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998888999999999999999998765
No 285
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=95.54 E-value=0.029 Score=51.58 Aligned_cols=52 Identities=21% Similarity=0.245 Sum_probs=42.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------------------------CCHhhhcC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------------KNPEQITS 178 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------------------------------~~l~~~~~ 178 (269)
++|.|||+|-+ |.+++..|++.|.+|++++++. .++.+.++
T Consensus 3 ~~V~VIG~G~m-G~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~ 81 (308)
T PRK06129 3 GSVAIIGAGLI-GRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA 81 (308)
T ss_pred cEEEEECccHH-HHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence 47999998775 9999999999999999997652 13345678
Q ss_pred CCCEEEeccCC
Q 024306 179 EADIVIAAAGV 189 (269)
Q Consensus 179 ~aDiVIsAtg~ 189 (269)
++|+||.+++.
T Consensus 82 ~ad~Vi~avpe 92 (308)
T PRK06129 82 DADYVQESAPE 92 (308)
T ss_pred CCCEEEECCcC
Confidence 99999999874
No 286
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.54 E-value=0.015 Score=54.28 Aligned_cols=76 Identities=22% Similarity=0.246 Sum_probs=52.1
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC---------------CCH-hhhcCCCCEEEeccCCCC--ccc
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---------------KNP-EQITSEADIVIAAAGVAN--LVR 194 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga---~Vti~~~~t---------------~~l-~~~~~~aDiVIsAtg~p~--~i~ 194 (269)
+.+|.|+|++|.+|+.++++|.+++. ++..+.+.. .++ ...+.++|+||.|+|... -+-
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~g~s~~~~ 80 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGGSVSKKYA 80 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCChHHHHHHH
Confidence 36899999999999999999998764 445554331 011 123468999999998521 122
Q ss_pred CCCcCCCcEEEEeeecC
Q 024306 195 GSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 195 ~~~~~~g~vViDv~~~~ 211 (269)
+..++.|++|||++-.+
T Consensus 81 ~~~~~~G~~VIDlS~~~ 97 (334)
T PRK14874 81 PKAAAAGAVVIDNSSAF 97 (334)
T ss_pred HHHHhCCCEEEECCchh
Confidence 33456788999998654
No 287
>PRK10637 cysG siroheme synthase; Provisional
Probab=95.54 E-value=0.026 Score=55.00 Aligned_cols=58 Identities=14% Similarity=0.194 Sum_probs=44.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-CCH-----------------hhhcCCCCEEEeccCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP-----------------EQITSEADIVIAAAGVA 190 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-~~l-----------------~~~~~~aDiVIsAtg~p 190 (269)
++++||+|+|||+|.+ |.-=+..|.+.||.|+|+...- +++ .+.++.+++||.||+-+
T Consensus 8 ~~l~~~~vlvvGgG~v-A~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~ 83 (457)
T PRK10637 8 CQLRDRDCLLVGGGDV-AERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDD 83 (457)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCH
Confidence 5789999999999886 7666778889999999985431 111 24577899999999864
No 288
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.52 E-value=0.032 Score=48.60 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=33.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++++|+++|.|+++-+|+.++..|.++|++|+++.++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~ 41 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA 41 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 34789999999998888999999999999998888654
No 289
>PRK04523 N-acetylornithine carbamoyltransferase; Reviewed
Probab=95.52 E-value=0.28 Score=46.01 Aligned_cols=146 Identities=16% Similarity=0.128 Sum_probs=93.2
Q ss_pred HHHHHHHHcCCeEEEEEcCCC--------------CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCC-----HHHHHhc
Q 024306 28 NKIKACEEVGIKSIVTEFADG--------------CTEDEVLNALSNYNQDSSINGILVQLPLPQHLD-----EGKILDA 88 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~--------------~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~-----~~~i~~~ 88 (269)
+-..++.++|-++.++.-... ...|.+.+.++-|+.- +|+|.+-.|-.. .+ ....++.
T Consensus 55 SFe~A~~~LGg~~i~l~~~~ss~~~e~~~g~~~~~~kgEsl~Dtarvls~~--~D~iv~R~~~~g-~~~~~~~~~~~~~~ 131 (335)
T PRK04523 55 SFELGAFQLGGHAVVLQPGKDAWPIEFELGAVMDGETEEHIREVARVLSRY--VDLIGVRAFPKF-VDWSKDRQDQVLNS 131 (335)
T ss_pred HHHHHHHHcCCeEEEeCcccccchhhcccccccCCCCCcCHHHHHHHHHHh--CcEEEEeCCccc-cccccchhHHHHHH
Confidence 456688999999888754321 0236677888888773 888988876321 00 0122233
Q ss_pred CCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCC-ccceEEEEcCC------cccHHHHHHHHHhCCC
Q 024306 89 VSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEI-MGKNAVVIGRS------NIVGLPTSLLLQRHHA 161 (269)
Q Consensus 89 i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l-~gk~v~ViG~g------g~vg~~~a~~L~~~ga 161 (269)
+.... .+-.+|. + .. +.||=+.+=+--++++-..+ +|++++|++.| +.|.+.++.++...|+
T Consensus 132 ~a~~s---~vPVINa-----~--~~-~HPtQaLaDl~Ti~e~~g~~~~g~ki~i~~~gd~~~~~~~v~~S~~~~~~~~g~ 200 (335)
T PRK04523 132 FAKYS---TVPVINM-----E--TI-THPCQELAHALALQEHFGTTLRGKKYVLTWTYHPKPLNTAVANSALLIATRLGM 200 (335)
T ss_pred HHHhC---CCCEEEC-----C--CC-CChHHHHHHHHHHHHHhCCccCCCEEEEEEeccCcccccHHHHHHHHHHHHcCC
Confidence 32221 2334454 2 23 66998888444444433457 89999887643 2468899999999999
Q ss_pred EEEEEeC-C-------------------------CCCHhhhcCCCCEEEecc
Q 024306 162 TVSIVHA-L-------------------------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 162 ~Vti~~~-~-------------------------t~~l~~~~~~aDiVIsAt 187 (269)
+|++++. . +.++.+.+++||+|.+-.
T Consensus 201 ~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~~ 252 (335)
T PRK04523 201 DVTLLCPTPDYILDERYMDWAEQNAAESGGSLTVSHDIDSAYAGADVVYAKS 252 (335)
T ss_pred EEEEECCchhhCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEece
Confidence 9999987 2 134567899999998644
No 290
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=95.50 E-value=0.018 Score=54.89 Aligned_cols=76 Identities=17% Similarity=0.212 Sum_probs=54.6
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhC-CCEEEEEeCCC---------------C------CHh-hhcCCCCEEEeccCC--
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALT---------------K------NPE-QITSEADIVIAAAGV-- 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~-ga~Vti~~~~t---------------~------~l~-~~~~~aDiVIsAtg~-- 189 (269)
.-++|.|+|+.|.+|+.+.++|.++ +.+++.+.+.. . ++. +.++++|+||.|+|.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 5569999999999999999999988 56887775431 0 011 124779999999984
Q ss_pred -CCcccCCCcCCCcEEEEeeecCC
Q 024306 190 -ANLVRGSWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 190 -p~~i~~~~~~~g~vViDv~~~~~ 212 (269)
.++++. + +.|..|||++....
T Consensus 117 s~~i~~~-~-~~g~~VIDlSs~fR 138 (381)
T PLN02968 117 TQEIIKA-L-PKDLKIVDLSADFR 138 (381)
T ss_pred HHHHHHH-H-hCCCEEEEcCchhc
Confidence 223333 3 57899999996644
No 291
>PRK06182 short chain dehydrogenase; Validated
Probab=95.49 E-value=0.024 Score=50.37 Aligned_cols=35 Identities=29% Similarity=0.139 Sum_probs=31.4
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|+++|.|+++-+|++++..|.++|++|+++.|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999998888999999999999999988765
No 292
>PLN02858 fructose-bisphosphate aldolase
Probab=95.48 E-value=0.023 Score=62.37 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=59.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCCc-----ccC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL-----VRG 195 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~~-----i~~ 195 (269)
+.++|-+||-|.+ |.++|..|.+.|.+|++.+++. .+..+..++||+||+.++.+.- +..
T Consensus 3 ~~~~IGfIGLG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~ 81 (1378)
T PLN02858 3 SAGVVGFVGLDSL-SFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGD 81 (1378)
T ss_pred CCCeEEEEchhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhch
Confidence 4578999999997 9999999999999999998863 3566788899999999885431 111
Q ss_pred ----CCcCCCcEEEEeeec
Q 024306 196 ----SWLKPGAVVLDVGTC 210 (269)
Q Consensus 196 ----~~~~~g~vViDv~~~ 210 (269)
..+++|.++||++..
T Consensus 82 ~g~~~~l~~g~iivd~STi 100 (1378)
T PLN02858 82 EGAAKGLQKGAVILIRSTI 100 (1378)
T ss_pred hhHHhcCCCcCEEEECCCC
Confidence 135788999998854
No 293
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.48 E-value=0.016 Score=51.33 Aligned_cols=39 Identities=21% Similarity=0.217 Sum_probs=34.9
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..++++|+++|.|+++.+|+.++..|+++|++|.++.+.
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~ 43 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDIN 43 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 356899999999999999999999999999998888665
No 294
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=95.46 E-value=0.036 Score=51.67 Aligned_cols=71 Identities=21% Similarity=0.271 Sum_probs=53.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC----------------------------CCCHhhhcCCCCEEEeccC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------TKNPEQITSEADIVIAAAG 188 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~----------------------------t~~l~~~~~~aDiVIsAtg 188 (269)
++|.|||+|.- |.++|..|++.|..|++-.|. +.|+.+.+++||+|+-++|
T Consensus 2 ~kI~ViGaGsw-GTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP 80 (329)
T COG0240 2 MKIAVIGAGSW-GTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP 80 (329)
T ss_pred ceEEEEcCChH-HHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence 57999999886 999999999999888887542 3578899999999999999
Q ss_pred CCC---ccc--CCCcCCCcEEEEee
Q 024306 189 VAN---LVR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 189 ~p~---~i~--~~~~~~g~vViDv~ 208 (269)
... .++ ...+++++.++-+.
T Consensus 81 s~~~r~v~~~l~~~l~~~~~iv~~s 105 (329)
T COG0240 81 SQALREVLRQLKPLLLKDAIIVSAT 105 (329)
T ss_pred hHHHHHHHHHHhhhccCCCeEEEEe
Confidence 632 111 13456666666554
No 295
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=95.44 E-value=0.034 Score=50.71 Aligned_cols=86 Identities=14% Similarity=-0.017 Sum_probs=55.1
Q ss_pred HHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------CCHhhhc-----C
Q 024306 124 IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------KNPEQIT-----S 178 (269)
Q Consensus 124 ~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------------~~l~~~~-----~ 178 (269)
...+.+...--+|.+|+|.|++|.+|..+++++..+|++|+.+.+.. .+..+.+ +
T Consensus 127 ~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~ 206 (325)
T TIGR02825 127 YFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPD 206 (325)
T ss_pred HHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCC
Confidence 33343333334789999999877779999999999999877654321 1121111 2
Q ss_pred CCCEEEeccCCCCc-ccCCCcCCCcEEEEeee
Q 024306 179 EADIVIAAAGVANL-VRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 179 ~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~ 209 (269)
..|++++++|.+.+ -.-++++++..++.++.
T Consensus 207 gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~ 238 (325)
T TIGR02825 207 GYDCYFDNVGGEFSNTVIGQMKKFGRIAICGA 238 (325)
T ss_pred CeEEEEECCCHHHHHHHHHHhCcCcEEEEecc
Confidence 46888888886432 12235677777777774
No 296
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.43 E-value=0.028 Score=49.38 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=32.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++||+++|.|+++-+|+.+++.|.++|++|.++.++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998889999999999999998877543
No 297
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.43 E-value=0.04 Score=50.02 Aligned_cols=35 Identities=26% Similarity=0.116 Sum_probs=30.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+||+|+|.|++|.+|+.++..|.++|.+|+++.+.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 47899999998889999999999999998876543
No 298
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.43 E-value=0.048 Score=51.32 Aligned_cols=113 Identities=19% Similarity=0.195 Sum_probs=68.0
Q ss_pred ccceEEEEcCCcccHHHHHHHHH-hCCCE---EEEEeCCC----------CCH------hhhcCCCCEEEeccCCCC--c
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQ-RHHAT---VSIVHALT----------KNP------EQITSEADIVIAAAGVAN--L 192 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~-~~ga~---Vti~~~~t----------~~l------~~~~~~aDiVIsAtg~p~--~ 192 (269)
++.+|.|||+.|.||+-+.++|. +.... +..+.+.. .++ .+.+++.|+++.|+|..- -
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~~~~~~~~~Divf~a~~~~~s~~ 83 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEAKINSFEGVDIAFFSAGGEVSRQ 83 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeCCHHHhcCCCEEEECCChHHHHH
Confidence 34689999999999999999999 46655 55554331 000 133478999999997421 1
Q ss_pred ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHH
Q 024306 193 VRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAML 254 (269)
Q Consensus 193 i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mL 254 (269)
+-+...+.|+.|||.+.....++.-+ -.+-.+..+.+++..+ +...|| -.|++|+
T Consensus 84 ~~~~~~~~G~~VID~Ss~fR~~~~vp---lvvPEvN~e~i~~~~~-iIanPn---C~tt~~~ 138 (347)
T PRK06728 84 FVNQAVSSGAIVIDNTSEYRMAHDVP---LVVPEVNAHTLKEHKG-IIAVPN---CSALQMV 138 (347)
T ss_pred HHHHHHHCCCEEEECchhhcCCCCCC---eEeCCcCHHHHhccCC-EEECCC---CHHHHHH
Confidence 22334467999999996654343221 1344444444444223 444665 3355555
No 299
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.42 E-value=0.024 Score=51.54 Aligned_cols=32 Identities=19% Similarity=0.129 Sum_probs=29.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|.|||+|.+ |.++|..|+..|.+|++.+++
T Consensus 5 ~kI~vIGaG~m-G~~iA~~la~~G~~V~l~d~~ 36 (292)
T PRK07530 5 KKVGVIGAGQM-GNGIAHVCALAGYDVLLNDVS 36 (292)
T ss_pred CEEEEECCcHH-HHHHHHHHHHCCCeEEEEeCC
Confidence 68999999887 999999999999999999764
No 300
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.42 E-value=0.025 Score=49.81 Aligned_cols=38 Identities=24% Similarity=0.265 Sum_probs=34.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++.+|+.+++.|+++|++|.++.+.
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999999999999999999998888654
No 301
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=95.42 E-value=0.038 Score=49.66 Aligned_cols=85 Identities=18% Similarity=0.246 Sum_probs=57.4
Q ss_pred HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCCC-----------------CH----hhhc--C
Q 024306 123 CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTK-----------------NP----EQIT--S 178 (269)
Q Consensus 123 ~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~-Vti~~~~t~-----------------~l----~~~~--~ 178 (269)
+...+++... ..|++|+|+|+|+ +|..+++.+..+|++ |+++.+... +. .+.. +
T Consensus 109 a~~al~~~~~-~~g~~VlV~G~G~-vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~ 186 (280)
T TIGR03366 109 VMAALEAAGD-LKGRRVLVVGAGM-LGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQGGLQNGR 186 (280)
T ss_pred HHHHHHhccC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHHHHhCCC
Confidence 3444544443 3899999999976 599999999999986 777643310 11 1111 3
Q ss_pred CCCEEEeccCCCCcc--cCCCcCCCcEEEEeee
Q 024306 179 EADIVIAAAGVANLV--RGSWLKPGAVVLDVGT 209 (269)
Q Consensus 179 ~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~ 209 (269)
.+|++|.++|.+..+ --+.++++..++-++.
T Consensus 187 g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~ 219 (280)
T TIGR03366 187 GVDVALEFSGATAAVRACLESLDVGGTAVLAGS 219 (280)
T ss_pred CCCEEEECCCChHHHHHHHHHhcCCCEEEEecc
Confidence 589999999876532 2346788888888885
No 302
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=95.42 E-value=0.046 Score=49.88 Aligned_cols=76 Identities=12% Similarity=0.186 Sum_probs=52.1
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCCCCHh-----------h-hcCCCCEEEeccCCCCccc--CCCc
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTKNPE-----------Q-ITSEADIVIAAAGVANLVR--GSWL 198 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~-Vti~~~~t~~l~-----------~-~~~~aDiVIsAtg~p~~i~--~~~~ 198 (269)
.+|++++|+|+|+ ||..+++++..+|++ |.++.+....+. + .-..+|+||.++|.+..+. -+.+
T Consensus 143 ~~~~~vlV~G~G~-vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~~i~~~~~~~~g~Dvvid~~G~~~~~~~~~~~l 221 (308)
T TIGR01202 143 VKVLPDLIVGHGT-LGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKDPRRDYRAIYDASGDPSLIDTLVRRL 221 (308)
T ss_pred cCCCcEEEECCCH-HHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhccccChhhccCCCCCEEEECCCCHHHHHHHHHhh
Confidence 4688999999877 499999999999997 545543311110 0 1135799999999865432 3567
Q ss_pred CCCcEEEEeeec
Q 024306 199 KPGAVVLDVGTC 210 (269)
Q Consensus 199 ~~g~vViDv~~~ 210 (269)
+++-.++-+|..
T Consensus 222 ~~~G~iv~~G~~ 233 (308)
T TIGR01202 222 AKGGEIVLAGFY 233 (308)
T ss_pred hcCcEEEEEeec
Confidence 887777777754
No 303
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.026 Score=49.06 Aligned_cols=38 Identities=24% Similarity=0.203 Sum_probs=34.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++||+++|.|+++.+|+.+++.|+++|++|.++.|+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~ 40 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQ 40 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCh
Confidence 47899999999999899999999999999999887764
No 304
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.39 E-value=0.037 Score=50.48 Aligned_cols=34 Identities=24% Similarity=0.110 Sum_probs=30.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.||+++|.|++|.+|+.++..|.++|++|+++.+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r 37 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVR 37 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc
Confidence 4799999999888999999999999999877643
No 305
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=95.38 E-value=0.057 Score=51.61 Aligned_cols=95 Identities=20% Similarity=0.296 Sum_probs=63.6
Q ss_pred cCCHHHHHHHHHHh---CCCCccceEEEEcCC----------------cccHHHHHHHHHhCCCEEEEEeCCC-------
Q 024306 117 PCTPKGCIELLIRS---GVEIMGKNAVVIGRS----------------NIVGLPTSLLLQRHHATVSIVHALT------- 170 (269)
Q Consensus 117 p~t~~g~~~~l~~~---~~~l~gk~v~ViG~g----------------g~vg~~~a~~L~~~ga~Vti~~~~t------- 170 (269)
+++++.++..+.+. +-+++||+++|.|.+ |-+|.++|..|..+||+|+++++..
T Consensus 163 ~~~~~~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~ 242 (390)
T TIGR00521 163 LAEPETIVKAAEREFSPKEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPG 242 (390)
T ss_pred CCCHHHHHHHHHHHHhhccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCC
Confidence 77788877777643 246899999999873 4349999999999999999987531
Q ss_pred ---------CCH-h----hhcCCCCEEEeccCCCCcc----cCCCcCC--CcEEEEeeecC
Q 024306 171 ---------KNP-E----QITSEADIVIAAAGVANLV----RGSWLKP--GAVVLDVGTCP 211 (269)
Q Consensus 171 ---------~~l-~----~~~~~aDiVIsAtg~p~~i----~~~~~~~--g~vViDv~~~~ 211 (269)
.++ . +...+.|++|.+.+...+- ...-+++ ..+.+.+.-+|
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~p 303 (390)
T TIGR00521 243 VKSIKVSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNP 303 (390)
T ss_pred cEEEEeccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCc
Confidence 122 1 2335689999998865442 1223443 23445555554
No 306
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.036 Score=49.04 Aligned_cols=35 Identities=29% Similarity=0.131 Sum_probs=31.6
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++++|.|+++.+|+.+++.|+++|++|+++.|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999999999999999999988765
No 307
>PLN02427 UDP-apiose/xylose synthase
Probab=95.36 E-value=0.035 Score=52.21 Aligned_cols=58 Identities=21% Similarity=0.221 Sum_probs=45.1
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhC-CCEEEEEeCCCC----------------------------CHhhhcCCCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTK----------------------------NPEQITSEAD 181 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~-ga~Vti~~~~t~----------------------------~l~~~~~~aD 181 (269)
+..++.++|+|.|+.|.+|+.++..|.++ |.+|+.+.+... .+.+.++++|
T Consensus 9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred CCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 45567789999999999999999999998 488887764321 1335567899
Q ss_pred EEEeccC
Q 024306 182 IVIAAAG 188 (269)
Q Consensus 182 iVIsAtg 188 (269)
+||...+
T Consensus 89 ~ViHlAa 95 (386)
T PLN02427 89 LTINLAA 95 (386)
T ss_pred EEEEccc
Confidence 9997776
No 308
>PRK09186 flagellin modification protein A; Provisional
Probab=95.35 E-value=0.02 Score=50.11 Aligned_cols=36 Identities=14% Similarity=0.214 Sum_probs=32.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||+++|.|+++-+|+.++..|.++|++|.++.|+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~ 37 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADID 37 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecC
Confidence 578999999998888999999999999998888664
No 309
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.016 Score=53.13 Aligned_cols=38 Identities=32% Similarity=0.295 Sum_probs=34.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999998888999999999999999988765
No 310
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.34 E-value=0.025 Score=52.44 Aligned_cols=65 Identities=20% Similarity=0.273 Sum_probs=50.3
Q ss_pred HHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcC--CCCEEEecc
Q 024306 121 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITS--EADIVIAAA 187 (269)
Q Consensus 121 ~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~~~~~--~aDiVIsAt 187 (269)
--+.+.|++++.. .|+++.|+|+|| +|.-..+....+|.+|+++.+..+..+++++ .||..|.++
T Consensus 168 ITvYspLk~~g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~ 234 (360)
T KOG0023|consen 168 ITVYSPLKRSGLG-PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDST 234 (360)
T ss_pred eEEeehhHHcCCC-CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEec
Confidence 3355678999998 999999999999 5999999999999999999877544445444 355555444
No 311
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.34 E-value=0.031 Score=51.92 Aligned_cols=59 Identities=20% Similarity=0.111 Sum_probs=45.5
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------------CHhhhcCCCCEEE
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------NPEQITSEADIVI 184 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------------------~l~~~~~~aDiVI 184 (269)
+.+-.+++|+|.|++|.+|+.++..|.++|++|+++.+... .+.+.+++.|.||
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 34567899999999999999999999999999887754311 1234456789999
Q ss_pred eccCC
Q 024306 185 AAAGV 189 (269)
Q Consensus 185 sAtg~ 189 (269)
...+.
T Consensus 85 h~A~~ 89 (353)
T PLN02896 85 HVAAS 89 (353)
T ss_pred ECCcc
Confidence 77764
No 312
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.33 E-value=0.04 Score=46.64 Aligned_cols=30 Identities=20% Similarity=0.369 Sum_probs=26.3
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~ 168 (269)
+|+|+|+|+. |..+++.|++.|. ++++++.
T Consensus 1 ~VlViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~ 31 (174)
T cd01487 1 KVGIAGAGGL-GSNIAVLLARSGVGNLKLVDF 31 (174)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 5899999997 9999999999997 5988853
No 313
>PRK07060 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.024 Score=49.13 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=34.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++++++++|.|+++.+|+.+++.|+++|++|+++.|+
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~ 42 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARN 42 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998878999999999999999988775
No 314
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.31 E-value=0.023 Score=50.72 Aligned_cols=70 Identities=20% Similarity=0.246 Sum_probs=49.2
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCE---EEEEeCCC----------------CCHhhhcCCCCEEEeccCCCC---cccC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHAT---VSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVRG 195 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~---Vti~~~~t----------------~~l~~~~~~aDiVIsAtg~p~---~i~~ 195 (269)
++.+||.|.+ |.+++..|.+.|.. +.+++|+. .+..+.++++|+||.+++... .+..
T Consensus 2 ~IgiIG~G~m-G~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p~~~~~vl~~ 80 (258)
T PRK06476 2 KIGFIGTGAI-TEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRPQIAEEVLRA 80 (258)
T ss_pred eEEEECcCHH-HHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCHHHHHHHHHH
Confidence 5899999887 99999999988743 56776642 234456788999999998321 2222
Q ss_pred CCcCCCcEEEEee
Q 024306 196 SWLKPGAVVLDVG 208 (269)
Q Consensus 196 ~~~~~g~vViDv~ 208 (269)
-.++++.+||++.
T Consensus 81 l~~~~~~~vis~~ 93 (258)
T PRK06476 81 LRFRPGQTVISVI 93 (258)
T ss_pred hccCCCCEEEEEC
Confidence 2356777887766
No 315
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.30 E-value=0.029 Score=49.35 Aligned_cols=38 Identities=29% Similarity=0.334 Sum_probs=34.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++.+|..+++.|.++|++|+++.|.
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~ 45 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARK 45 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 45789999999998889999999999999999988765
No 316
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=95.30 E-value=0.067 Score=52.00 Aligned_cols=124 Identities=22% Similarity=0.264 Sum_probs=66.1
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCH--hhhcCCCCEEEeccCCCCcccCCCcCC-CcEEEEeeec
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--EQITSEADIVIAAAGVANLVRGSWLKP-GAVVLDVGTC 210 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l--~~~~~~aDiVIsAtg~p~~i~~~~~~~-g~vViDv~~~ 210 (269)
+.+|+|+|+|-|.. |+++++.|.++|+.|++++.+.... ........-|=...|. +.. +++.. ..+|.-=|++
T Consensus 5 ~~~~kv~V~GLG~s-G~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~-~~~--~~~~~~d~vV~SPGi~ 80 (448)
T COG0771 5 FQGKKVLVLGLGKS-GLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGS-HDD--EDLAEFDLVVKSPGIP 80 (448)
T ss_pred ccCCEEEEEecccc-cHHHHHHHHHCCCeEEEEcCCCCccchhhhhhhccCceeecCc-cch--hccccCCEEEECCCCC
Confidence 45899999999999 9999999999999999997553220 0000000000011111 001 12211 2233332333
Q ss_pred CCCCC----CCCCCceeecccchHHHhh-HcceecccCCcccHHHHHHHHHHHHHHHH
Q 024306 211 PVDDP----SCEYGYRLMGDVCYEEAMR-LASVITPVPGGVGPMTVAMLLSNTLDSAK 263 (269)
Q Consensus 211 ~~~~~----~~~~~~~l~GDvd~~~~~~-~~~~~tpvpgGvGp~T~~mLl~n~v~a~~ 263 (269)
+. +| -...|.++.||++.-.-.. .+- +.-|-|==|.=|+.-|+.+++++.-
T Consensus 81 ~~-~p~v~~A~~~gi~i~~dieL~~r~~~~~p-~vaITGTNGKTTTTsli~~~l~~~G 136 (448)
T COG0771 81 PT-HPLVEAAKAAGIEIIGDIELFYRLSGEAP-IVAITGTNGKTTTTSLIAHLLKAAG 136 (448)
T ss_pred CC-CHHHHHHHHcCCcEEeHHHHHHHhcCCCC-EEEEECCCchHHHHHHHHHHHHhcC
Confidence 22 11 0012236888887432110 111 2224455688899999999988753
No 317
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.019 Score=50.38 Aligned_cols=37 Identities=27% Similarity=0.354 Sum_probs=33.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~ 39 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARR 39 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3678999999998888999999999999999888765
No 318
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.28 E-value=0.039 Score=48.56 Aligned_cols=54 Identities=11% Similarity=0.095 Sum_probs=41.2
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCC---CE-EEEEeCCC----------------CCHhhhcCCCCEEEeccCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHH---AT-VSIVHALT----------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~g---a~-Vti~~~~t----------------~~l~~~~~~aDiVIsAtg~ 189 (269)
+..+|.|||+|.+ |++++..|.+.+ .+ +++++++. .+..+.++++|+||.+++.
T Consensus 3 ~~~kI~iIG~G~m-g~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~ 76 (245)
T PRK07634 3 KKHRILFIGAGRM-AEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPP 76 (245)
T ss_pred CCCeEEEECcCHH-HHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCH
Confidence 4578999999987 999999998776 23 66676531 2345667889999999984
No 319
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=95.28 E-value=0.037 Score=54.13 Aligned_cols=73 Identities=16% Similarity=0.244 Sum_probs=52.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------CHhhhcC---CCCEEEeccCCCC--
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQITS---EADIVIAAAGVAN-- 191 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------------~l~~~~~---~aDiVIsAtg~p~-- 191 (269)
.+|.|||.|.+ |.++|..|+++|.+|++.+|+.. ++++.+. ++|+||..+..+.
T Consensus 2 ~~IgvIGLG~M-G~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v 80 (470)
T PTZ00142 2 SDIGLIGLAVM-GQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAV 80 (470)
T ss_pred CEEEEEeEhHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHH
Confidence 36899999987 99999999999999999988631 2333343 4787776655332
Q ss_pred --ccc--CCCcCCCcEEEEeeec
Q 024306 192 --LVR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 192 --~i~--~~~~~~g~vViDv~~~ 210 (269)
.+. ...+++|.+|||.+..
T Consensus 81 ~~vi~~l~~~L~~g~iIID~gn~ 103 (470)
T PTZ00142 81 DETIDNLLPLLEKGDIIIDGGNE 103 (470)
T ss_pred HHHHHHHHhhCCCCCEEEECCCC
Confidence 121 1246788999998854
No 320
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=95.26 E-value=0.048 Score=50.79 Aligned_cols=55 Identities=25% Similarity=0.182 Sum_probs=45.2
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------------CHhhhcCCCCEEE-
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------NPEQITSEADIVI- 184 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------------------~l~~~~~~aDiVI- 184 (269)
.+++|+|.|++|.+|.-+++.|+.+|++|.-.-|... .+.+.+..+|.|+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 6789999999999999999999999999988866532 2346788899999
Q ss_pred eccCC
Q 024306 185 AAAGV 189 (269)
Q Consensus 185 sAtg~ 189 (269)
+|.+.
T Consensus 85 ~Asp~ 89 (327)
T KOG1502|consen 85 TASPV 89 (327)
T ss_pred eCccC
Confidence 55443
No 321
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.033 Score=48.87 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999998888664
No 322
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=95.26 E-value=0.053 Score=50.56 Aligned_cols=87 Identities=17% Similarity=0.192 Sum_probs=57.5
Q ss_pred HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---------------------HhhhcCCCC
Q 024306 123 CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PEQITSEAD 181 (269)
Q Consensus 123 ~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~---------------------l~~~~~~aD 181 (269)
+...+...+..-.|.+++|.|.|+ +|..+++++..+|+.|+++.+.... +.+.....|
T Consensus 168 a~~al~~~~~~~~g~~vlV~G~G~-vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D 246 (357)
T PLN02514 168 VYSPLSHFGLKQSGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLD 246 (357)
T ss_pred HHHHHHHcccCCCCCeEEEEcccH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCc
Confidence 344454444445799999999866 5999999999999987666433211 112233579
Q ss_pred EEEeccCCCCcc--cCCCcCCCcEEEEeeec
Q 024306 182 IVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 182 iVIsAtg~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
++|.++|.+..+ --+.++++..++.+|..
T Consensus 247 ~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 277 (357)
T PLN02514 247 YIIDTVPVFHPLEPYLSLLKLDGKLILMGVI 277 (357)
T ss_pred EEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence 999998864322 22457787778888854
No 323
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.019 Score=52.10 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=34.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+.+++.|+++|++|.++.++
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLE 42 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998888999999999999999888765
No 324
>PRK09242 tropinone reductase; Provisional
Probab=95.25 E-value=0.017 Score=50.78 Aligned_cols=38 Identities=26% Similarity=0.253 Sum_probs=33.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..++||+++|.|+++-+|+.++..|.++|++|+++.|+
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~ 42 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARD 42 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 35789999999998888999999999999999888665
No 325
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.25 E-value=0.035 Score=54.60 Aligned_cols=72 Identities=18% Similarity=0.334 Sum_probs=54.3
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcC---CCCEEEeccCCCCc-
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITS---EADIVIAAAGVANL- 192 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------~l~~~~~---~aDiVIsAtg~p~~- 192 (269)
+|-+||-|.+ |+++|..|++.|.+|+++||+.. ++.+.+. ++|+||..++.+..
T Consensus 8 ~IG~IGLG~M-G~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV 86 (493)
T PLN02350 8 RIGLAGLAVM-GQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPV 86 (493)
T ss_pred CEEEEeeHHH-HHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHH
Confidence 5899999887 99999999999999999998631 1223333 49999988875442
Q ss_pred ---cc--CCCcCCCcEEEEeeec
Q 024306 193 ---VR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 193 ---i~--~~~~~~g~vViDv~~~ 210 (269)
+. ...+++|.++||.+..
T Consensus 87 ~~Vi~gl~~~l~~G~iiID~sT~ 109 (493)
T PLN02350 87 DQTIKALSEYMEPGDCIIDGGNE 109 (493)
T ss_pred HHHHHHHHhhcCCCCEEEECCCC
Confidence 11 1236789999999865
No 326
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.24 E-value=0.047 Score=43.55 Aligned_cols=50 Identities=22% Similarity=0.267 Sum_probs=35.5
Q ss_pred eEEEEcCCcccHHHHHHHHHh-CCCE-EEEEeCCC----------------------CCHhhhcCCCCEEEecc
Q 024306 138 NAVVIGRSNIVGLPTSLLLQR-HHAT-VSIVHALT----------------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~-~ga~-Vti~~~~t----------------------~~l~~~~~~aDiVIsAt 187 (269)
+|.|+|++|-+|+.++..+.+ .+.+ +-.+.+.. .++.+.+.++|++|..|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcC
Confidence 689999944459999999988 5666 44555554 45667777788888777
No 327
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.019 Score=50.18 Aligned_cols=37 Identities=30% Similarity=0.366 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.+++.|.++|++|.++.++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~ 41 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRK 41 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999999999999999888765
No 328
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.21 E-value=0.029 Score=49.54 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=33.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.+++||+++|.|+++-+|++++..|+++|++|+++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~ 40 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN 40 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 3578999999999888999999999999999988754
No 329
>PRK07680 late competence protein ComER; Validated
Probab=95.20 E-value=0.028 Score=50.63 Aligned_cols=71 Identities=18% Similarity=0.288 Sum_probs=50.8
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC----EEEEEeCCC----------------CCHhhhcCCCCEEEeccCCCC---ccc
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHA----TVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVR 194 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga----~Vti~~~~t----------------~~l~~~~~~aDiVIsAtg~p~---~i~ 194 (269)
++.|||+|.+ |.+++..|.+.|. +|++++|+. .+..+.+.++|+||.++.... .+.
T Consensus 2 ~I~iIG~G~m-G~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~p~~~~~vl~ 80 (273)
T PRK07680 2 NIGFIGTGNM-GTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVKPLDIYPLLQ 80 (273)
T ss_pred EEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecCHHHHHHHHH
Confidence 5899999886 9999999998883 689998752 233455788999999986221 121
Q ss_pred --CCCcCCCcEEEEeee
Q 024306 195 --GSWLKPGAVVLDVGT 209 (269)
Q Consensus 195 --~~~~~~g~vViDv~~ 209 (269)
...++++.+|+++.-
T Consensus 81 ~l~~~l~~~~~iis~~a 97 (273)
T PRK07680 81 KLAPHLTDEHCLVSITS 97 (273)
T ss_pred HHHhhcCCCCEEEEECC
Confidence 124566788888873
No 330
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=95.20 E-value=0.029 Score=50.09 Aligned_cols=52 Identities=15% Similarity=0.172 Sum_probs=41.8
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------CHhhhcCCC--CEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------NPEQITSEA--DIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------~l~~~~~~a--DiVIsAtg~ 189 (269)
+|+|+|++|.+|+.++..|.++|.+|+++.|..- ++.+.++.+ |+||...+.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence 5899999888999999999999999998877532 244556655 999988774
No 331
>PRK06196 oxidoreductase; Provisional
Probab=95.20 E-value=0.022 Score=52.11 Aligned_cols=39 Identities=31% Similarity=0.381 Sum_probs=35.2
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..+++||+++|.|+++-+|+.+++.|+++|++|+++.|+
T Consensus 21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999998888999999999999999988765
No 332
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.20 E-value=0.023 Score=49.76 Aligned_cols=37 Identities=35% Similarity=0.423 Sum_probs=33.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++.+|+.++..|+++|++|.++.|.
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~ 40 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLN 40 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 3679999999998889999999999999998888664
No 333
>PRK08264 short chain dehydrogenase; Validated
Probab=95.19 E-value=0.03 Score=48.45 Aligned_cols=38 Identities=24% Similarity=0.173 Sum_probs=33.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t 170 (269)
++.+++++|+|+++.+|+.+++.|.++|+ +|+++.|..
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~ 41 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP 41 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecCh
Confidence 36789999999988899999999999999 899887753
No 334
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.18 E-value=0.049 Score=53.10 Aligned_cols=122 Identities=18% Similarity=0.248 Sum_probs=68.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-CHhh--hcCCCCEEEeccCCCCcccCCCcC-CCcEEEEeee
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NPEQ--ITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGT 209 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-~l~~--~~~~aDiVIsAtg~p~~i~~~~~~-~g~vViDv~~ 209 (269)
++||+|+|+|.|.. |+++++.|.++|+.|++...... ...+ .+++ ++..--.+.+ ++.+. ...+|.--|+
T Consensus 6 ~~~~~v~v~G~G~s-G~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~l~~-~~~~~~~~~~----~~~~~~~d~vV~SpgI 79 (468)
T PRK04690 6 LEGRRVALWGWGRE-GRAAYRALRAHLPAQALTLFCNAVEAREVGALAD-AALLVETEAS----AQRLAAFDVVVKSPGI 79 (468)
T ss_pred cCCCEEEEEccchh-hHHHHHHHHHcCCEEEEEcCCCcccchHHHHHhh-cCEEEeCCCC----hHHccCCCEEEECCCC
Confidence 46899999999998 99999999999999999875431 1111 2322 2222111111 11121 2334444444
Q ss_pred cCCCCCC----CCCCceeecccch--HHHhhH---cceecccCCcccHHHHHHHHHHHHHHH
Q 024306 210 CPVDDPS----CEYGYRLMGDVCY--EEAMRL---ASVITPVPGGVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 210 ~~~~~~~----~~~~~~l~GDvd~--~~~~~~---~~~~tpvpgGvGp~T~~mLl~n~v~a~ 262 (269)
++.. |. ...+-++++++++ ....+. ...+.-|-|--|.=|+.-|+.++++..
T Consensus 80 ~~~~-p~~~~a~~~~i~i~~~~el~~~~~~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~ 140 (468)
T PRK04690 80 SPYR-PEALAAAARGTPFIGGTALWFAEHAARDGVVPGTVCVTGTKGKSTTTALLAHLLRAA 140 (468)
T ss_pred CCCC-HHHHHHHHcCCcEEEHHHHHHHHHhhccCCCCCEEEEeCCCCHHHHHHHHHHHHHhc
Confidence 4321 10 0012257777775 111110 012344668889999999999888654
No 335
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.17 E-value=0.031 Score=49.24 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.+.
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~ 41 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA 41 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCc
Confidence 5789999999999999999999999999999887653
No 336
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.028 Score=49.50 Aligned_cols=37 Identities=16% Similarity=0.279 Sum_probs=33.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++.+|+.++..|+++|++|.++.|+
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4689999999998888999999999999999988765
No 337
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=95.15 E-value=0.055 Score=49.60 Aligned_cols=74 Identities=14% Similarity=0.081 Sum_probs=49.7
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------CCHhhhc-----CCCCEEEeccCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------KNPEQIT-----SEADIVIAAAGV 189 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t--------------------~~l~~~~-----~~aDiVIsAtg~ 189 (269)
|.+|+|.|++|.+|..+++++..+|+ .|+.+.++. .++.+.+ +..|++++++|.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 38999999966679999999999998 677764431 1121111 247888888886
Q ss_pred CCc-ccCCCcCCCcEEEEeee
Q 024306 190 ANL-VRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 190 p~~-i~~~~~~~g~vViDv~~ 209 (269)
+.. -.-+.++++..++.+|.
T Consensus 235 ~~~~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EISDTVISQMNENSHIILCGQ 255 (345)
T ss_pred HHHHHHHHHhccCCEEEEEee
Confidence 432 11235677777777773
No 338
>PRK07411 hypothetical protein; Validated
Probab=95.14 E-value=0.032 Score=53.24 Aligned_cols=34 Identities=24% Similarity=0.420 Sum_probs=30.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEe
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 167 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~ 167 (269)
.++.++|+|+|.||. |-+++..|+..|. ++++++
T Consensus 35 ~L~~~~VlivG~GGl-G~~va~~La~~Gvg~l~lvD 69 (390)
T PRK07411 35 RLKAASVLCIGTGGL-GSPLLLYLAAAGIGRIGIVD 69 (390)
T ss_pred HHhcCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEC
Confidence 357889999999996 9999999999997 688884
No 339
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.035 Score=48.55 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=30.6
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+|+++|.|++|-+|+.+++.|+++|++|+++.|.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQI 35 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999989999999999999999887664
No 340
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=95.12 E-value=0.032 Score=53.26 Aligned_cols=33 Identities=33% Similarity=0.513 Sum_probs=29.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEe
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 167 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~ 167 (269)
++.++|+|+|.||. |..++..|+..|. ++++++
T Consensus 40 L~~~~VlviG~GGl-Gs~va~~La~~Gvg~i~lvD 73 (392)
T PRK07878 40 LKNARVLVIGAGGL-GSPTLLYLAAAGVGTLGIVE 73 (392)
T ss_pred HhcCCEEEECCCHH-HHHHHHHHHHcCCCeEEEEC
Confidence 57889999999996 9999999999996 688884
No 341
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=95.11 E-value=0.039 Score=51.91 Aligned_cols=54 Identities=11% Similarity=0.055 Sum_probs=42.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------C------HhhhcCCCCEEEeccC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------N------PEQITSEADIVIAAAG 188 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------~------l~~~~~~aDiVIsAtg 188 (269)
++++|+|.|+.|.+|+.++..|.++|.+|+.+.|... + +...++++|+||...+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 6799999999999999999999999999988865311 1 1234567899997775
No 342
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=95.11 E-value=0.036 Score=48.89 Aligned_cols=37 Identities=24% Similarity=0.308 Sum_probs=33.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|+|+++.+|+.+++.|.++|+.|.++.+.
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~ 40 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS 40 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999999999999999999998887653
No 343
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=95.10 E-value=0.043 Score=50.79 Aligned_cols=71 Identities=23% Similarity=0.280 Sum_probs=51.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------------CHhhhcCCCCEEEecc
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------NPEQITSEADIVIAAA 187 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------------------~l~~~~~~aDiVIsAt 187 (269)
.+|.|||+|.+ |.+++..|++.|.+|+++.|... ...+.++.+|+||.++
T Consensus 3 mkI~IiG~G~m-G~~~A~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vil~v 81 (341)
T PRK08229 3 ARICVLGAGSI-GCYLGGRLAAAGADVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDPAALATADLVLVTV 81 (341)
T ss_pred ceEEEECCCHH-HHHHHHHHHhcCCcEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccChhhccCCCEEEEEe
Confidence 46999999886 99999999999999999876410 0113457899999998
Q ss_pred CCCCc---cc--CCCcCCCcEEEEee
Q 024306 188 GVANL---VR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 188 g~p~~---i~--~~~~~~g~vViDv~ 208 (269)
..+.. +. ...++++++|+++.
T Consensus 82 k~~~~~~~~~~l~~~~~~~~iii~~~ 107 (341)
T PRK08229 82 KSAATADAAAALAGHARPGAVVVSFQ 107 (341)
T ss_pred cCcchHHHHHHHHhhCCCCCEEEEeC
Confidence 86442 11 11356778888873
No 344
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.022 Score=51.20 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=33.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|++++..|+++|++|.++.+.
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999999889999999999999999888654
No 345
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.037 Score=48.19 Aligned_cols=37 Identities=24% Similarity=0.254 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.+++.|+++|++|.+..|.
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~ 39 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN 39 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4688999999998888999999999999999988775
No 346
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.03 Score=49.57 Aligned_cols=37 Identities=24% Similarity=0.239 Sum_probs=33.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++++++|.|+++.+|+.++..|.++|++|.++.|+
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~ 43 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART 43 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999989999999999999999888765
No 347
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=95.09 E-value=0.067 Score=48.46 Aligned_cols=93 Identities=15% Similarity=0.003 Sum_probs=57.3
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhc
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQIT 177 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~~ 177 (269)
|+....++..|.+...--+|.+++|.|++|.+|..+++++...|++|+.+.+.. .+..+.+
T Consensus 125 ~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v 204 (329)
T cd08294 125 GMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEAL 204 (329)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHH
Confidence 333344444454433334789999999877789999999999999877654321 1221111
Q ss_pred -----CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeee
Q 024306 178 -----SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 178 -----~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~ 209 (269)
+..|+|++++|.+.+ -.-+.++++..++.++.
T Consensus 205 ~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~ 242 (329)
T cd08294 205 KEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGS 242 (329)
T ss_pred HHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcc
Confidence 246888888875322 12234666666666663
No 348
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.09 E-value=0.03 Score=48.36 Aligned_cols=37 Identities=24% Similarity=0.335 Sum_probs=33.5
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
++||+++|.|+++.+|..+++.|.++|++|++..|+.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~ 39 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE 39 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6789999999999999999999999999998887753
No 349
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.08 E-value=0.036 Score=48.03 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=32.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|+++|.|+++.+|+.++..|.++|++|+++.|+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999999888765
No 350
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=95.08 E-value=0.051 Score=53.42 Aligned_cols=52 Identities=15% Similarity=0.091 Sum_probs=43.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------------CCHhhhcCCCCE
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADI 182 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------------------------~~l~~~~~~aDi 182 (269)
++|.|||+|.+ |.++|..|+..|..|++++++. .++.+.+++||+
T Consensus 5 ~kIavIG~G~M-G~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~ 83 (495)
T PRK07531 5 MKAACIGGGVI-GGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW 83 (495)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence 47999999887 9999999999999999997542 234467889999
Q ss_pred EEeccCC
Q 024306 183 VIAAAGV 189 (269)
Q Consensus 183 VIsAtg~ 189 (269)
||.+++-
T Consensus 84 Vieavpe 90 (495)
T PRK07531 84 IQESVPE 90 (495)
T ss_pred EEEcCcC
Confidence 9998874
No 351
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.039 Score=48.53 Aligned_cols=38 Identities=21% Similarity=0.288 Sum_probs=34.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||.++|.|+++-+|+.+++.|+++|++|.++.++
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~ 41 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLR 41 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999999889999999999999999988765
No 352
>PRK06194 hypothetical protein; Provisional
Probab=95.08 E-value=0.034 Score=49.66 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=32.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999998888999999999999999888764
No 353
>PRK08589 short chain dehydrogenase; Validated
Probab=95.07 E-value=0.026 Score=50.38 Aligned_cols=37 Identities=27% Similarity=0.315 Sum_probs=33.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 3689999999998888999999999999999988765
No 354
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.07 E-value=0.024 Score=50.11 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=32.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERS 39 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999998888999999999999999988765
No 355
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.06 E-value=0.023 Score=50.61 Aligned_cols=38 Identities=29% Similarity=0.378 Sum_probs=34.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++++|+++|.|+++-+|+.++..|+++|++|.++.|+
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999998888999999999999999988765
No 356
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.024 Score=49.25 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=32.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||+++|.|+++.+|+.++..|+++|++|.+..|+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~ 39 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRD 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence 578999999999999999999999999998877654
No 357
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=95.06 E-value=0.046 Score=50.68 Aligned_cols=76 Identities=28% Similarity=0.368 Sum_probs=52.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC---CC------------------CHh--hhcCCCCEEEeccCCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---TK------------------NPE--QITSEADIVIAAAGVA 190 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~---t~------------------~l~--~~~~~aDiVIsAtg~p 190 (269)
..|++|+|+|+|+ +|..+++++...|++|+++.++ .. +.. .....+|+||.++|.+
T Consensus 171 ~~g~~vlI~G~G~-vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 249 (355)
T cd08230 171 WNPRRALVLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVP 249 (355)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCH
Confidence 4789999999866 5999999999999998887652 10 110 1123579999999976
Q ss_pred Cccc--CCCcCCCcEEEEeeec
Q 024306 191 NLVR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 191 ~~i~--~~~~~~g~vViDv~~~ 210 (269)
..+. -+.++++-.++-+|..
T Consensus 250 ~~~~~~~~~l~~~G~~v~~G~~ 271 (355)
T cd08230 250 PLAFEALPALAPNGVVILFGVP 271 (355)
T ss_pred HHHHHHHHHccCCcEEEEEecC
Confidence 4332 2346777666666654
No 358
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.06 E-value=0.061 Score=51.85 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=32.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+.+|+++|+|.|++ |+++++.|+++|+.|++.+..
T Consensus 3 ~~~~~~~v~G~g~~-G~~~a~~l~~~g~~v~~~d~~ 37 (445)
T PRK04308 3 FQNKKILVAGLGGT-GISMIAYLRKNGAEVAAYDAE 37 (445)
T ss_pred CCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999998 999999999999999998754
No 359
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=95.06 E-value=0.059 Score=50.16 Aligned_cols=94 Identities=21% Similarity=0.235 Sum_probs=56.4
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHh---
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE--- 174 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~--- 174 (269)
|+++.-+..+|....---.|.+|+|.|++|.||..+.+++...|+++.+..+++ .++.
T Consensus 124 ~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v 203 (326)
T COG0604 124 PLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQV 203 (326)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHH
Confidence 444444455555432222399999999888899999999999996533332221 1122
Q ss_pred -hhc--CCCCEEEeccCCCCcc-cCCCcCCCcEEEEeeec
Q 024306 175 -QIT--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 175 -~~~--~~aDiVIsAtg~p~~i-~~~~~~~g~vViDv~~~ 210 (269)
+.+ +..|+|++.+|.+.+- .-..++++-.++.++..
T Consensus 204 ~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~ 243 (326)
T COG0604 204 RELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGAL 243 (326)
T ss_pred HHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecC
Confidence 233 2478888888865431 23345555555566643
No 360
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=95.05 E-value=0.083 Score=49.84 Aligned_cols=93 Identities=15% Similarity=0.163 Sum_probs=60.2
Q ss_pred cCCHHHHHHHHHHhCCC-CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---------------------Hh
Q 024306 117 PCTPKGCIELLIRSGVE-IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PE 174 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~-l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~---------------------l~ 174 (269)
+|....+...+...... -.|.+++|.|+|+ +|..+++++..+|++|+++.+..+. +.
T Consensus 159 ~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~ 237 (375)
T PLN02178 159 LCAGITVYSPMKYYGMTKESGKRLGVNGLGG-LGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMK 237 (375)
T ss_pred hccchHHHHHHHHhCCCCCCCCEEEEEcccH-HHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHH
Confidence 34434444555544433 3689999999876 5999999999999987766433211 11
Q ss_pred hhcCCCCEEEeccCCCCcc--cCCCcCCCcEEEEeeec
Q 024306 175 QITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 175 ~~~~~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
+.+..+|+||.++|.+..+ .-+.++++-.++.++..
T Consensus 238 ~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~ 275 (375)
T PLN02178 238 EAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLP 275 (375)
T ss_pred HhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccC
Confidence 1223479999998876432 23457787777788864
No 361
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.03 Score=49.73 Aligned_cols=37 Identities=27% Similarity=0.302 Sum_probs=33.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|++++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~ 38 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLD 38 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 4678999999998889999999999999999888665
No 362
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=95.05 E-value=0.042 Score=47.17 Aligned_cols=78 Identities=23% Similarity=0.385 Sum_probs=46.7
Q ss_pred CccceEEEEc----------------CCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------CHhhhc
Q 024306 134 IMGKNAVVIG----------------RSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQIT 177 (269)
Q Consensus 134 l~gk~v~ViG----------------~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------------~l~~~~ 177 (269)
++||+|+|-+ ++|-.|.++|..+..+||+|++++.... .+.+.+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~ 80 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL 80 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence 4678888775 3444599999999999999999986631 123567
Q ss_pred CCCCEEEeccCCCCcc----cCCCcCC---CcEEEEeeecC
Q 024306 178 SEADIVIAAAGVANLV----RGSWLKP---GAVVLDVGTCP 211 (269)
Q Consensus 178 ~~aDiVIsAtg~p~~i----~~~~~~~---g~vViDv~~~~ 211 (269)
+++|++|.|.-...|- ...-+++ ....+.+.-+|
T Consensus 81 ~~~Di~I~aAAVsDf~p~~~~~~KIkK~~~~~l~l~L~~~p 121 (185)
T PF04127_consen 81 PSADIIIMAAAVSDFRPEEPAEGKIKKSSGDELTLELKPTP 121 (185)
T ss_dssp GGGSEEEE-SB--SEEESCHHSS-G---TT-CEEEEEEE-G
T ss_pred CcceeEEEecchhheeehhccccccccccCcceEEEEEeCh
Confidence 8899999877755542 2234552 35777877776
No 363
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=95.04 E-value=0.06 Score=51.40 Aligned_cols=71 Identities=25% Similarity=0.357 Sum_probs=49.8
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------------------CCHhhhcCCCCEEEe
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------KNPEQITSEADIVIA 185 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------------------------~~l~~~~~~aDiVIs 185 (269)
+|.|||.|-+ |.++|..|+. |.+|+.+++.. .+..+..++||+||.
T Consensus 2 kI~VIGlGyv-Gl~~A~~lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii 79 (388)
T PRK15057 2 KITISGTGYV-GLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVII 79 (388)
T ss_pred EEEEECCCHH-HHHHHHHHHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEE
Confidence 5899999886 9999987774 88999997541 112344688999999
Q ss_pred ccCCCC----------ccc------CCCcCCCcEEEEeeecC
Q 024306 186 AAGVAN----------LVR------GSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 186 Atg~p~----------~i~------~~~~~~g~vViDv~~~~ 211 (269)
+++.|- .+. .. +++|.+||+...-|
T Consensus 80 ~Vpt~~~~k~~~~dl~~v~~v~~~i~~-~~~g~lVV~~STv~ 120 (388)
T PRK15057 80 ATPTDYDPKTNYFNTSSVESVIKDVVE-INPYAVMVIKSTVP 120 (388)
T ss_pred eCCCCCccCCCCcChHHHHHHHHHHHh-cCCCCEEEEeeecC
Confidence 998651 110 11 36788888766544
No 364
>PRK12743 oxidoreductase; Provisional
Probab=95.04 E-value=0.058 Score=47.48 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=30.1
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
+|+++|.|+++.+|+.+++.|+++|++|.++.+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~ 34 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWH 34 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 689999999999999999999999999988754
No 365
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.03 E-value=0.035 Score=48.43 Aligned_cols=36 Identities=33% Similarity=0.433 Sum_probs=32.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|+++|.|+++.+|+.+++.|.++|++|.++.|+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~ 37 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLN 37 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 578999999998889999999999999999888765
No 366
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.03 E-value=0.057 Score=50.18 Aligned_cols=37 Identities=16% Similarity=0.079 Sum_probs=33.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.-+++|+|+|.|+.|.+|+.++..|.++|.+|+.+.+
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~ 47 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDN 47 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 4578899999999999999999999999999887754
No 367
>PLN02778 3,5-epimerase/4-reductase
Probab=95.03 E-value=0.061 Score=49.12 Aligned_cols=55 Identities=20% Similarity=0.159 Sum_probs=41.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---HhhhcC--CCCEEEeccCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---PEQITS--EADIVIAAAGV 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~---l~~~~~--~aDiVIsAtg~ 189 (269)
..++|+|.|++|.+|+.++..|.++|.+|+.....-.+ +...++ +.|+||.+++.
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcc
Confidence 34789999999999999999999999998765433222 223333 68999977763
No 368
>PLN02858 fructose-bisphosphate aldolase
Probab=95.01 E-value=0.037 Score=60.77 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=57.8
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----cc-cC-
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-RG- 195 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i-~~- 195 (269)
.++|.+||-|.+ |.+++..|.+.|.+|++.+++. .+..+.++++|+||.+++.|. .+ ..
T Consensus 324 ~~~IGfIGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~ 402 (1378)
T PLN02858 324 VKRIGFIGLGAM-GFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDL 402 (1378)
T ss_pred CCeEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchh
Confidence 378999999987 9999999999999999998762 245567889999999998544 11 11
Q ss_pred ---CCcCCCcEEEEeeec
Q 024306 196 ---SWLKPGAVVLDVGTC 210 (269)
Q Consensus 196 ---~~~~~g~vViDv~~~ 210 (269)
+.+++|.++||+...
T Consensus 403 g~~~~l~~g~ivVd~STv 420 (1378)
T PLN02858 403 GAVSALPAGASIVLSSTV 420 (1378)
T ss_pred hHHhcCCCCCEEEECCCC
Confidence 235778899998763
No 369
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.01 E-value=0.033 Score=48.96 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=32.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|+++|.|+++.+|+.+++.|+++|++|.++.+.
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~ 39 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIK 39 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCC
Confidence 678999999998889999999999999999888665
No 370
>PLN02214 cinnamoyl-CoA reductase
Probab=95.01 E-value=0.053 Score=50.36 Aligned_cols=35 Identities=20% Similarity=0.100 Sum_probs=31.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
+++++|+|.|++|.+|+.++..|.++|.+|+.+.|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r 42 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVR 42 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 57899999999988999999999999999887755
No 371
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.00 E-value=0.064 Score=52.59 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=32.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+.+++|+|+|.|++ |+++|++|.++|++|+.++..
T Consensus 5 ~~~~~i~v~G~G~s-G~s~a~~L~~~G~~v~~~D~~ 39 (498)
T PRK02006 5 LQGPMVLVLGLGES-GLAMARWCARHGARLRVADTR 39 (498)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEEcCC
Confidence 56899999999998 999999999999999999864
No 372
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=94.95 E-value=0.025 Score=54.96 Aligned_cols=55 Identities=24% Similarity=0.326 Sum_probs=45.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhcCCCCEEEeccCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
++||+|+|||.|.. |++-|..|...|.+|++--|.. .++.+.++.||+|+..++-
T Consensus 34 LkgKtIaIIGyGSq-G~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPD 107 (487)
T PRK05225 34 LKGKKIVIVGCGAQ-GLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPD 107 (487)
T ss_pred hCCCEEEEEccCHH-HHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCCh
Confidence 68999999999886 9998888999999888654431 2467889999999999983
No 373
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=94.94 E-value=0.042 Score=54.89 Aligned_cols=36 Identities=22% Similarity=-0.000 Sum_probs=32.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+||.++|.|++|-+|+.++..|+++|++|+++.|+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn 113 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 478999999998888999999999999999988664
No 374
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=94.93 E-value=0.038 Score=46.65 Aligned_cols=37 Identities=24% Similarity=0.406 Sum_probs=31.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++||+|+|||+|.+ |.-++..|++.|.+|+++.|+.
T Consensus 164 ~~~~k~V~VVG~G~S-A~d~a~~l~~~g~~V~~~~R~~ 200 (203)
T PF13738_consen 164 DFKGKRVVVVGGGNS-AVDIAYALAKAGKSVTLVTRSP 200 (203)
T ss_dssp GCTTSEEEEE--SHH-HHHHHHHHTTTCSEEEEEESS-
T ss_pred hcCCCcEEEEcChHH-HHHHHHHHHhhCCEEEEEecCC
Confidence 578999999999998 9999999999999999999864
No 375
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=94.92 E-value=0.037 Score=54.59 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=29.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|.|||+|-+ |.++|..|+..|..|++.+++
T Consensus 6 ~kV~VIGaG~M-G~gIA~~la~aG~~V~l~d~~ 37 (503)
T TIGR02279 6 VTVAVIGAGAM-GAGIAQVAASAGHQVLLYDIR 37 (503)
T ss_pred cEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence 67999999886 999999999999999999765
No 376
>COG0540 PyrB Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism]
Probab=94.92 E-value=0.91 Score=42.02 Aligned_cols=140 Identities=17% Similarity=0.278 Sum_probs=90.9
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccc-cceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH-PLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~--~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~-~~n~g 104 (269)
+-..+++++|.++.-..-..+. .-|-|.+.++-|++ -++|.|.+-.|.-. ..+++...+ +++ .+|.|
T Consensus 63 SFE~A~krLG~~Vv~~~~~~sSs~KGEtL~DT~~tl~a-yg~D~iViRH~~eg---aa~~~a~~~------~~~pvINaG 132 (316)
T COG0540 63 SFETAMKRLGADVVNFSDSESSSKKGETLADTIRTLSA-YGVDAIVIRHPEEG---AARLLAEFS------GVNPVINAG 132 (316)
T ss_pred hHHHHHHHcCCcEEeecCCcccccccccHHHHHHHHHh-hCCCEEEEeCcccc---HHHHHHHhc------CCCceEECC
Confidence 4567889999987544333222 25679999999999 57899999998653 123333322 222 45653
Q ss_pred ccccCCCCCccccC-CHHHHHHHHHHhCCCCccceEEEEc---CCcccHHHHHHHHHhCCCEEEEEeCCC----------
Q 024306 105 NLAMRGREPLFIPC-TPKGCIELLIRSGVEIMGKNAVVIG---RSNIVGLPTSLLLQRHHATVSIVHALT---------- 170 (269)
Q Consensus 105 ~l~~g~~~~~~~p~-t~~g~~~~l~~~~~~l~gk~v~ViG---~gg~vg~~~a~~L~~~ga~Vti~~~~t---------- 170 (269)
- | .. -.|+ +-.-...+.+++|. ++|++|+++| .|.+ .+..+.+|...|++|.++...+
T Consensus 133 D---G--~~-qHPTQ~LLDl~TI~~~~G~-~~gl~iaivGDlkhsRv-a~S~~~~L~~~ga~v~lvsP~~L~~p~~i~~~ 204 (316)
T COG0540 133 D---G--SH-QHPTQALLDLYTIREEFGR-LDGLKIAIVGDLKHSRV-AHSNIQALKRFGAEVYLVSPETLLPPEYILEE 204 (316)
T ss_pred C---C--CC-CCccHHHHHHHHHHHHhCC-cCCcEEEEEccccchHH-HHHHHHHHHHcCCEEEEECchHhCCchhHHHH
Confidence 2 2 11 1233 22223344445544 9999999999 5665 8999999999999999995431
Q ss_pred -----------CCHhhhcCCCCEEEe
Q 024306 171 -----------KNPEQITSEADIVIA 185 (269)
Q Consensus 171 -----------~~l~~~~~~aDiVIs 185 (269)
...++.+.++|++..
T Consensus 205 l~~~~~~~~~~~~~e~~i~~~DVl~~ 230 (316)
T COG0540 205 LEEKGGVVVEHDSDEEVIEEADVLYM 230 (316)
T ss_pred HhhcCceEEEecchhhhhccCCEEEe
Confidence 233458889999873
No 377
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=94.89 E-value=0.08 Score=48.85 Aligned_cols=53 Identities=28% Similarity=0.434 Sum_probs=40.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC--------------------------CCCHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL--------------------------TKNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~--------------------------t~~l~~~~~~aDiVIsAtg~ 189 (269)
++|.|||+|.+ |..+|..|+.+|. +|++++.. +.++. .+++||+||.+.|.
T Consensus 2 ~KV~VIGaG~v-G~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~-~~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGAGFV-GATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYA-DTANSDIVVITAGL 79 (305)
T ss_pred CEEEEECcCHH-HHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHH-HhCCCCEEEEcCCC
Confidence 47999999774 9999999999875 78888643 12333 37899999999996
Q ss_pred CC
Q 024306 190 AN 191 (269)
Q Consensus 190 p~ 191 (269)
|.
T Consensus 80 p~ 81 (305)
T TIGR01763 80 PR 81 (305)
T ss_pred CC
Confidence 53
No 378
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=94.89 E-value=0.15 Score=44.32 Aligned_cols=93 Identities=27% Similarity=0.339 Sum_probs=61.0
Q ss_pred CCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhh--
Q 024306 118 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQI-- 176 (269)
Q Consensus 118 ~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~-- 176 (269)
+....+...+++...-.+|.+++|.|+|+ +|..+++++...|++|+.+.+.. .+..+.
T Consensus 117 ~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 195 (271)
T cd05188 117 EPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELR 195 (271)
T ss_pred CHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHH
Confidence 33333445555544445799999999999 79999999999999888775531 011111
Q ss_pred ---cCCCCEEEeccCCCCcc--cCCCcCCCcEEEEeeecC
Q 024306 177 ---TSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 177 ---~~~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~~ 211 (269)
-+..|++|++++.+..+ ..+.++++..+++++...
T Consensus 196 ~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 196 LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence 24579999888763221 234566777777887544
No 379
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.88 E-value=0.042 Score=48.50 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=31.1
Q ss_pred CccceEEEEcCC--cccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~g--g~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||.++|.|++ +-+|+++++.|+++|++|.++.|+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 689999999997 235999999999999999988654
No 380
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=94.88 E-value=0.043 Score=51.56 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=52.5
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC---------------CCH-hhhcCCCCEEEeccCCCC--cc
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---------------KNP-EQITSEADIVIAAAGVAN--LV 193 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga---~Vti~~~~t---------------~~l-~~~~~~aDiVIsAtg~p~--~i 193 (269)
...+|.|+|++|.+|+.+.++|.+++. ++..+.+.. .++ .+.+.++|+||.|+|... -+
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~~~~~~~~D~vf~a~p~~~s~~~ 85 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELTEDSFDGVDIALFSAGGSISKKF 85 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCCHHHHcCCCEEEECCCcHHHHHH
Confidence 457899999999999999999998664 444332221 011 134578999999998421 12
Q ss_pred cCCCcCCCcEEEEeeecCC
Q 024306 194 RGSWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 194 ~~~~~~~g~vViDv~~~~~ 212 (269)
-+...+.|+.|||.+-...
T Consensus 86 ~~~~~~~g~~VIDlS~~fR 104 (344)
T PLN02383 86 GPIAVDKGAVVVDNSSAFR 104 (344)
T ss_pred HHHHHhCCCEEEECCchhh
Confidence 2233457999999985543
No 381
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.87 E-value=0.058 Score=52.23 Aligned_cols=35 Identities=29% Similarity=0.253 Sum_probs=32.5
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|++|.|+|.|+. |+++|..|.++|++|+++++.
T Consensus 7 ~~~~~i~viG~G~~-G~~~a~~l~~~G~~v~~~D~~ 41 (460)
T PRK01390 7 FAGKTVAVFGLGGS-GLATARALVAGGAEVIAWDDN 41 (460)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEECCC
Confidence 67899999999998 999999999999999999865
No 382
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=94.86 E-value=0.046 Score=48.03 Aligned_cols=37 Identities=27% Similarity=0.292 Sum_probs=33.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++|+++|.|+++-+|+++++.|+++|++|.++.|.
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 3689999999998889999999999999999988764
No 383
>PRK07576 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.046 Score=48.55 Aligned_cols=37 Identities=27% Similarity=0.413 Sum_probs=33.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.++..|+.+|++|+++.|+
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998888999999999999999998765
No 384
>PRK12742 oxidoreductase; Provisional
Probab=94.85 E-value=0.048 Score=47.07 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=31.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.++||+++|.|+++-+|+.+++.|+++|++|.+..+
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~ 38 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYA 38 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence 367999999999888899999999999999877643
No 385
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=94.84 E-value=0.032 Score=54.55 Aligned_cols=71 Identities=20% Similarity=0.292 Sum_probs=51.7
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------CHhh---hcCCCCEEEeccCCCC----
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQ---ITSEADIVIAAAGVAN---- 191 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------------~l~~---~~~~aDiVIsAtg~p~---- 191 (269)
+|.+||.|.+ |.++|..|++.|.+|++.+|+.. ++.+ .++++|+||..++...
T Consensus 1 ~IG~IGLG~M-G~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v~~ 79 (467)
T TIGR00873 1 DIGVIGLAVM-GSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDA 79 (467)
T ss_pred CEEEEeeHHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHHHH
Confidence 3789999987 99999999999999999988631 1222 2346798888876532
Q ss_pred ccc--CCCcCCCcEEEEeee
Q 024306 192 LVR--GSWLKPGAVVLDVGT 209 (269)
Q Consensus 192 ~i~--~~~~~~g~vViDv~~ 209 (269)
.+. ...+++|.+|||.+.
T Consensus 80 Vi~~l~~~L~~g~iIID~gn 99 (467)
T TIGR00873 80 VINQLLPLLEKGDIIIDGGN 99 (467)
T ss_pred HHHHHHhhCCCCCEEEECCC
Confidence 121 124678999999985
No 386
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.83 E-value=0.075 Score=49.52 Aligned_cols=54 Identities=13% Similarity=0.331 Sum_probs=40.6
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC-------EEEEEeCCC--------------------------CCHhhhcCCCCEEE
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHA-------TVSIVHALT--------------------------KNPEQITSEADIVI 184 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga-------~Vti~~~~t--------------------------~~l~~~~~~aDiVI 184 (269)
+|+|+|++|.||..++..|..++. ++.+++... .+..+.+++||+||
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 799999966679999999987662 266665432 23457789999999
Q ss_pred eccCCCC
Q 024306 185 AAAGVAN 191 (269)
Q Consensus 185 sAtg~p~ 191 (269)
.+.|.|.
T Consensus 82 itAG~~~ 88 (323)
T cd00704 82 LVGAFPR 88 (323)
T ss_pred EeCCCCC
Confidence 9988653
No 387
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=94.83 E-value=0.074 Score=51.68 Aligned_cols=53 Identities=21% Similarity=0.162 Sum_probs=43.7
Q ss_pred ccCCHHHHHHHH----HHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE-EEeCC
Q 024306 116 IPCTPKGCIELL----IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHAL 169 (269)
Q Consensus 116 ~p~t~~g~~~~l----~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vt-i~~~~ 169 (269)
-++|++|++..+ ++.+.+++||+|+|=|.|.+ |..+++.|.+.|++|. +++++
T Consensus 213 ~eATG~Gv~~~~~~~l~~~~~~l~Gk~VaVqG~GnV-g~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 213 PEATGYGLVYFVLEVLKKLNDSLEGKTVVVSGSGNV-AQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred CcccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEEcCC
Confidence 357988876554 55678899999999999885 9999999999999966 77655
No 388
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.83 E-value=0.043 Score=49.22 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=31.1
Q ss_pred CccceEEEEcCC---cccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~g---g~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||.++|.|++ |+ |+++|+.|+++|++|.++.|+
T Consensus 5 l~~k~~lVTGas~~~GI-G~aiA~~la~~Ga~V~~~~r~ 42 (271)
T PRK06505 5 MQGKRGLIMGVANDHSI-AWGIAKQLAAQGAELAFTYQG 42 (271)
T ss_pred cCCCEEEEeCCCCCCcH-HHHHHHHHHhCCCEEEEecCc
Confidence 689999999998 55 999999999999999888654
No 389
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.82 E-value=0.037 Score=50.08 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=28.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|.|||+|-+ |.+++..|+..|.+|++++++
T Consensus 4 ~kI~VIG~G~m-G~~ia~~la~~g~~V~~~d~~ 35 (282)
T PRK05808 4 QKIGVIGAGTM-GNGIAQVCAVAGYDVVMVDIS 35 (282)
T ss_pred cEEEEEccCHH-HHHHHHHHHHCCCceEEEeCC
Confidence 57999999886 999999999999999998743
No 390
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.82 E-value=0.049 Score=48.23 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=32.0
Q ss_pred CCCccceEEEEcCC---cccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~g---g~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||.++|.|++ |+ |+++++.|+++|++|.++.++
T Consensus 6 ~~~~~k~~lItGas~g~GI-G~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSI-AWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred cccCCCEEEEECCCCCCcH-HHHHHHHHHHcCCEEEEEeCC
Confidence 45789999999986 55 999999999999999888664
No 391
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=94.81 E-value=0.045 Score=56.16 Aligned_cols=73 Identities=27% Similarity=0.322 Sum_probs=54.4
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCC----------------CCHhhhcCCCCEEEeccCCCC---ccc-
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVR- 194 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~g--a~Vti~~~~t----------------~~l~~~~~~aDiVIsAtg~p~---~i~- 194 (269)
++|.|||.|.+ |.+++..|.+.| .+|++++++. .++.+.+.++|+||.+++... .+.
T Consensus 4 ~~I~IIG~G~m-G~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~ 82 (735)
T PRK14806 4 GRVVVIGLGLI-GGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLAMEKVLAD 82 (735)
T ss_pred cEEEEEeeCHH-HHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence 67999999986 999999999988 4788887652 234455789999999998422 111
Q ss_pred -CCCcCCCcEEEEeeec
Q 024306 195 -GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 195 -~~~~~~g~vViDv~~~ 210 (269)
...++++++|+|++..
T Consensus 83 l~~~~~~~~ii~d~~sv 99 (735)
T PRK14806 83 LKPLLSEHAIVTDVGST 99 (735)
T ss_pred HHHhcCCCcEEEEcCCC
Confidence 1245678899999854
No 392
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.81 E-value=0.074 Score=49.08 Aligned_cols=52 Identities=21% Similarity=0.277 Sum_probs=40.8
Q ss_pred eEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCCC-----------------------CHhhhcCCCCEEEeccCCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALTK-----------------------NPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~g--a~Vti~~~~t~-----------------------~l~~~~~~aDiVIsAtg~p 190 (269)
+|.|||+|. ||.+++..|+.+| .+|.++++... .-.+.+++||+||.++|.|
T Consensus 2 kI~IIGaG~-VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~ 78 (308)
T cd05292 2 KVAIVGAGF-VGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGAN 78 (308)
T ss_pred EEEEECCCH-HHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCC
Confidence 699999977 5999999999999 46888876531 0124578999999999964
No 393
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.81 E-value=0.058 Score=51.30 Aligned_cols=39 Identities=21% Similarity=0.140 Sum_probs=34.3
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
....++++++|+|++|.+|+.++..|.++|.+|+++.|.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~ 93 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE 93 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec
Confidence 355678999999999999999999999999999888764
No 394
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.80 E-value=0.041 Score=47.69 Aligned_cols=36 Identities=22% Similarity=0.433 Sum_probs=33.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++++++|.|+++.+|+.++..|+++|++|.++.|+
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~ 40 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLART 40 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999989999999999999999998875
No 395
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=94.79 E-value=0.044 Score=54.14 Aligned_cols=32 Identities=22% Similarity=0.252 Sum_probs=29.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|.|||+|-+ |.++|..|+..|..|++.+++
T Consensus 8 ~~V~VIGaG~M-G~gIA~~la~aG~~V~l~D~~ 39 (507)
T PRK08268 8 ATVAVIGAGAM-GAGIAQVAAQAGHTVLLYDAR 39 (507)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence 67999999876 999999999999999999765
No 396
>PRK06139 short chain dehydrogenase; Provisional
Probab=94.78 E-value=0.025 Score=52.52 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=33.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~ 40 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARD 40 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4688999999998888999999999999999998765
No 397
>PRK06223 malate dehydrogenase; Reviewed
Probab=94.76 E-value=0.091 Score=48.11 Aligned_cols=53 Identities=26% Similarity=0.404 Sum_probs=40.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------------CCHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t--------------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
++|.|||+|. ||..++..++..|. +|.+.+... .+. +.+++||+||.++|.
T Consensus 3 ~KI~VIGaG~-vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~ 80 (307)
T PRK06223 3 KKISIIGAGN-VGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV 80 (307)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence 5899999966 59999999998874 888886431 123 457899999999886
Q ss_pred CC
Q 024306 190 AN 191 (269)
Q Consensus 190 p~ 191 (269)
|.
T Consensus 81 p~ 82 (307)
T PRK06223 81 PR 82 (307)
T ss_pred CC
Confidence 53
No 398
>PRK12939 short chain dehydrogenase; Provisional
Probab=94.76 E-value=0.044 Score=47.52 Aligned_cols=37 Identities=30% Similarity=0.366 Sum_probs=32.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++|+++|.|+++.+|+.+++.|.++|++|.++.+.
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 4678999999998888999999999999998887654
No 399
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=94.75 E-value=0.055 Score=50.83 Aligned_cols=76 Identities=24% Similarity=0.302 Sum_probs=51.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHhC-CCEEE-EEeCCC---C--------------------CHhhhcCCCCEEEeccCCCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRH-HATVS-IVHALT---K--------------------NPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~-ga~Vt-i~~~~t---~--------------------~l~~~~~~aDiVIsAtg~p~ 191 (269)
.+|.|+|++|.+|+-+++.|.++ +.++. ++.++. + +..+...++|+||.|+|...
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP~~~ 80 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALPHGV 80 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCCchH
Confidence 37999999888899999999877 46766 544321 1 11233357999999998421
Q ss_pred --cccCCCcCCCcEEEEeeecCC
Q 024306 192 --LVRGSWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 192 --~i~~~~~~~g~vViDv~~~~~ 212 (269)
-+-+...+.|..|||++....
T Consensus 81 s~~~~~~~~~~G~~VIDlS~~fR 103 (346)
T TIGR01850 81 SAELAPELLAAGVKVIDLSADFR 103 (346)
T ss_pred HHHHHHHHHhCCCEEEeCChhhh
Confidence 133334567899999986543
No 400
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.73 E-value=0.072 Score=48.89 Aligned_cols=58 Identities=17% Similarity=0.257 Sum_probs=45.8
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------------------CCHhhhc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------KNPEQIT 177 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------------------------~~l~~~~ 177 (269)
..+++|+.|+|-|+|.-+||.+|..++++|+++.+.+.+. +.+++..
T Consensus 33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV 112 (300)
T ss_pred hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999999765553221 1234556
Q ss_pred CCCCEEEeccC
Q 024306 178 SEADIVIAAAG 188 (269)
Q Consensus 178 ~~aDiVIsAtg 188 (269)
..-||+||.+|
T Consensus 113 G~V~ILVNNAG 123 (300)
T KOG1201|consen 113 GDVDILVNNAG 123 (300)
T ss_pred CCceEEEeccc
Confidence 77899999998
No 401
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.72 E-value=0.056 Score=46.56 Aligned_cols=37 Identities=32% Similarity=0.282 Sum_probs=32.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++.+|+.+++.|.++|++|+++.++
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999999999999999999999999998777554
No 402
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=94.72 E-value=0.059 Score=48.75 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=41.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcCCCCEEEeccC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAG 188 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg 188 (269)
++++|.|++|.+|+.++..|.++|.+|+++.|... ++.+.++.+|+||...+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA 73 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence 36999999888999999999999999988876421 23456677899997765
No 403
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.72 E-value=0.05 Score=47.24 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=32.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|+++|.|+++.+|+.+++.|+++|++|.+..++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 478999999999989999999999999998887654
No 404
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.71 E-value=0.054 Score=46.62 Aligned_cols=37 Identities=32% Similarity=0.379 Sum_probs=33.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++.+++++|.|+++.+|+.+++.|.++|++|+++.|.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~ 38 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSN 38 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3567899999999989999999999999999888775
No 405
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=94.70 E-value=0.047 Score=51.19 Aligned_cols=84 Identities=20% Similarity=0.222 Sum_probs=57.4
Q ss_pred HHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------CHhhhcC-CCCEEE
Q 024306 125 ELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQITS-EADIVI 184 (269)
Q Consensus 125 ~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------------~l~~~~~-~aDiVI 184 (269)
+.|++.+. -.|++|+|+|.||. |..+++++..+||+|+.+.+..+ +..+.++ .+|++|
T Consensus 157 ~alk~~~~-~pG~~V~I~G~GGl-Gh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii 234 (339)
T COG1064 157 RALKKANV-KPGKWVAVVGAGGL-GHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAII 234 (339)
T ss_pred eehhhcCC-CCCCEEEEECCcHH-HHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEE
Confidence 34554322 36999999999986 99999988889999999976532 1112222 288888
Q ss_pred eccCCCCcc--cCCCcCCCcEEEEeeecC
Q 024306 185 AAAGVANLV--RGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 185 sAtg~p~~i--~~~~~~~g~vViDv~~~~ 211 (269)
++++ +..+ .-+.++++-.++=+|..+
T Consensus 235 ~tv~-~~~~~~~l~~l~~~G~~v~vG~~~ 262 (339)
T COG1064 235 DTVG-PATLEPSLKALRRGGTLVLVGLPG 262 (339)
T ss_pred ECCC-hhhHHHHHHHHhcCCEEEEECCCC
Confidence 8888 5543 334577776666778764
No 406
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=94.68 E-value=0.065 Score=50.34 Aligned_cols=69 Identities=16% Similarity=0.216 Sum_probs=50.8
Q ss_pred eEEEEcCCcccHHHHHHHHHhCC--------CEEEEEeC-----C----------------------------CCCHhhh
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHH--------ATVSIVHA-----L----------------------------TKNPEQI 176 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~g--------a~Vti~~~-----~----------------------------t~~l~~~ 176 (269)
+|.|||+|.. |.++|..|++.| .+|++..+ . +.++.+.
T Consensus 1 kI~VIGaG~w-GtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea 79 (342)
T TIGR03376 1 RVAVVGSGNW-GTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA 79 (342)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence 5899999886 999999999888 78888755 1 1356788
Q ss_pred cCCCCEEEeccCCCC---c---ccCCCcCCCcEEEEee
Q 024306 177 TSEADIVIAAAGVAN---L---VRGSWLKPGAVVLDVG 208 (269)
Q Consensus 177 ~~~aDiVIsAtg~p~---~---i~~~~~~~g~vViDv~ 208 (269)
+++||+||-|++... . +. .++++++.++-+.
T Consensus 80 l~~ADiIIlAVPs~~i~~vl~~l~-~~l~~~~~iVs~t 116 (342)
T TIGR03376 80 AKGADILVFVIPHQFLEGICKQLK-GHVKPNARAISCI 116 (342)
T ss_pred HhcCCEEEEECChHHHHHHHHHHH-hhcCCCCEEEEEe
Confidence 899999999998532 1 22 2456666666554
No 407
>PRK06153 hypothetical protein; Provisional
Probab=94.65 E-value=0.042 Score=52.35 Aligned_cols=34 Identities=15% Similarity=0.288 Sum_probs=30.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEe
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 167 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~ 167 (269)
.|++++|+|||.||. |..++..|++.|. ++++++
T Consensus 173 kL~~~~VaIVG~GG~-GS~Va~~LAR~GVgeI~LVD 207 (393)
T PRK06153 173 KLEGQRIAIIGLGGT-GSYILDLVAKTPVREIHLFD 207 (393)
T ss_pred HHhhCcEEEEcCCcc-HHHHHHHHHHcCCCEEEEEC
Confidence 378999999999997 9999999999996 688883
No 408
>PRK07326 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.057 Score=46.58 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=32.5
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+.+++++|+|++|.+|+.+++.|+++|++|.++.|.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~ 39 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARD 39 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCC
Confidence 468999999998889999999999999999998765
No 409
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.054 Score=47.68 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=32.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|+++|.|+++.+|+.++..|.++|++|+++.|.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 678999999999999999999999999999888765
No 410
>PRK07806 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.059 Score=46.88 Aligned_cols=36 Identities=31% Similarity=0.333 Sum_probs=32.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|+++|.|+++-+|+.++..|.++|++|+++.|+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 678999999998778999999999999999887664
No 411
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.64 E-value=0.055 Score=48.36 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=33.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++.+|+.+++.|+++|++|.++.|+
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKT 39 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 3678999999999999999999999999999888764
No 412
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.056 Score=48.00 Aligned_cols=37 Identities=22% Similarity=0.154 Sum_probs=33.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++.+|+.+++.|.++|++|.++.|+
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4688999999998888999999999999999988764
No 413
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.61 E-value=0.036 Score=48.14 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=32.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|++++|+|+++.+|+.+++.|.++|++|+++.+.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999999997778999999999999998888765
No 414
>PLN00106 malate dehydrogenase
Probab=94.59 E-value=0.13 Score=47.99 Aligned_cols=57 Identities=26% Similarity=0.380 Sum_probs=42.6
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCC-----------------------CCCHhhhcCCCCEEEeccCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHAL-----------------------TKNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~-----------------------t~~l~~~~~~aDiVIsAtg~ 189 (269)
..++|+|+|+.|.||..+++.|+.++. ++.+++.. +.++.+.+++||+||.+.|.
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~ 96 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV 96 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence 346899999944469999999987663 57766431 23456789999999999986
Q ss_pred CC
Q 024306 190 AN 191 (269)
Q Consensus 190 p~ 191 (269)
|.
T Consensus 97 ~~ 98 (323)
T PLN00106 97 PR 98 (323)
T ss_pred CC
Confidence 43
No 415
>PRK13376 pyrB bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; Provisional
Probab=94.58 E-value=0.52 Score=46.77 Aligned_cols=146 Identities=13% Similarity=0.064 Sum_probs=91.7
Q ss_pred HHHHHHHHc-CCeEEEEEcCCC--CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-cccccccc---c
Q 024306 28 NKIKACEEV-GIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFH---P 100 (269)
Q Consensus 28 ~~~~~~~~~-Gi~~~~~~~~~~--~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~kdvdg~~---~ 100 (269)
+-..++.++ |..+.+..-... ...|-+.+.++-|+.--+.++|.+-.|..... ..+.+.+.. .+.. ++. .
T Consensus 67 SFE~A~~~LgGg~~i~l~~~~ssl~kGESl~DTarvLs~y~D~d~IviR~~~~g~~--~~~~~~l~~~a~~s-~vpVp~V 143 (525)
T PRK13376 67 SFINAAKFHKNVKVNIFDSEHSSFNKQESYTDTFNMLTGYSDYSIFIVRTRLEGVC--RLLEEKVSEFASRN-GIEVPAF 143 (525)
T ss_pred HHHHHHHHcCCCcEEEcCCccccCCCCcCHHHHHHHHHHcCCCcEEEEeCCccchh--HHHHHHHHHHHHhc-CCCcceE
Confidence 345677778 888877643211 01356778888787742224898887754322 222222222 1111 111 2
Q ss_pred ceecccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhCC-CEEEEEeCC-------
Q 024306 101 LNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHH-ATVSIVHAL------- 169 (269)
Q Consensus 101 ~n~g~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~g--g~vg~~~a~~L~~~g-a~Vti~~~~------- 169 (269)
+|.| +.+.+.||=+.+ ++.+.++.+.+++|++|+++|.+ +-+.+.++..|+..| ++|+++...
T Consensus 144 INAg------dg~~~HPTQaLaDl~TI~E~~G~~l~glkVa~vGD~~~~rva~Sl~~~l~~~g~~~v~l~~P~~~~~p~~ 217 (525)
T PRK13376 144 INAG------DGKHEHPTQELLDEFTFLEQNNFDNSFIHIALVGDLLHGRTVHSKVNGLKIFKNVKVDLIAPEELAMPEH 217 (525)
T ss_pred EECC------CCCCCCchHHHHHHHHHHHHcCCCcCCCEEEEECCCCCCcHHHHHHHHHHhcCCcEEEEECCccccCCHH
Confidence 4642 234466887777 55666666657999999999995 345888899999998 899999643
Q ss_pred --------------CCCHhhhcCCCCE
Q 024306 170 --------------TKNPEQITSEADI 182 (269)
Q Consensus 170 --------------t~~l~~~~~~aDi 182 (269)
+.++.+++++||+
T Consensus 218 ~~~~a~~~G~~v~i~~d~~eav~~AD~ 244 (525)
T PRK13376 218 YVEKMKKNGFEVRIFSSIEEYLSQKDV 244 (525)
T ss_pred HHHHHHHcCCeEEEEcCHHHHhccCCc
Confidence 1456788899994
No 416
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.57 E-value=0.05 Score=47.00 Aligned_cols=37 Identities=35% Similarity=0.442 Sum_probs=32.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE-eCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV-HAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~-~~~ 169 (269)
++.+|+++|+|+++.+|+.++..|+++|++|.++ .|.
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~ 39 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDIN 39 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 3678999999998888999999999999998887 654
No 417
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.55 E-value=0.058 Score=49.22 Aligned_cols=39 Identities=33% Similarity=0.354 Sum_probs=34.7
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~ 45 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA 45 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 367899999999999989999999999999998887653
No 418
>PRK09414 glutamate dehydrogenase; Provisional
Probab=94.54 E-value=0.085 Score=51.26 Aligned_cols=51 Identities=24% Similarity=0.187 Sum_probs=42.3
Q ss_pred cccCCHHHHHHHH----HHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE
Q 024306 115 FIPCTPKGCIELL----IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 166 (269)
Q Consensus 115 ~~p~t~~g~~~~l----~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~ 166 (269)
-.+.|++|+...+ ++.+.+++|++|+|.|.|.+ |+.+|+.|.+.|++|+.+
T Consensus 207 r~~aTg~Gv~~~~~~~~~~~~~~l~g~rVaIqGfGnV-G~~~A~~L~~~GakVVav 261 (445)
T PRK09414 207 RTEATGYGLVYFAEEMLKARGDSFEGKRVVVSGSGNV-AIYAIEKAQQLGAKVVTC 261 (445)
T ss_pred CCCcccHHHHHHHHHHHHhcCCCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEE
Confidence 3467888875555 45678999999999999885 999999999999997655
No 419
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=94.53 E-value=0.057 Score=50.05 Aligned_cols=76 Identities=13% Similarity=0.125 Sum_probs=51.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCC----CCHhhhcCCCCEEEeccCCCC--cccCCCcCCCcEEEEeee
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT----KNPEQITSEADIVIAAAGVAN--LVRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t----~~l~~~~~~aDiVIsAtg~p~--~i~~~~~~~g~vViDv~~ 209 (269)
.+|.|+|++|..|.-+.++|.++- .++.-+.+.. .+..+.+.++|++|-|++... -+-+.....|+.|||++.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~~~~~~~~~~~~~~D~vFlalp~~~s~~~~~~~~~~g~~VIDlSa 81 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRKDAAERAKLLNAADVAILCLPDDAAREAVSLVDNPNTCIIDAST 81 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccccCcCCHhHhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEEECCh
Confidence 379999999999999999998775 3544333221 133455678999999997421 122223456899999996
Q ss_pred cCC
Q 024306 210 CPV 212 (269)
Q Consensus 210 ~~~ 212 (269)
...
T Consensus 82 dfR 84 (310)
T TIGR01851 82 AYR 84 (310)
T ss_pred HHh
Confidence 644
No 420
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.53 E-value=0.055 Score=49.10 Aligned_cols=37 Identities=27% Similarity=0.284 Sum_probs=33.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999998887664
No 421
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=94.51 E-value=0.055 Score=42.56 Aligned_cols=75 Identities=21% Similarity=0.220 Sum_probs=47.7
Q ss_pred eEEEEcCCcccHHHHHHHHHhC-CCEEEEE-eCCC---CC-------H--------h-hhc--CCCCEEEeccCCCC---
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRH-HATVSIV-HALT---KN-------P--------E-QIT--SEADIVIAAAGVAN--- 191 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~-ga~Vti~-~~~t---~~-------l--------~-~~~--~~aDiVIsAtg~p~--- 191 (269)
++.|+|++|.+|+.++..|.+. +.+++.+ .+.. +. + . ..+ .++|+||.+++...
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~ 80 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVSKE 80 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChhhcCCCEEEEcCCcHHHHH
Confidence 4789998777799888888874 6775544 3221 00 0 0 112 37899999998432
Q ss_pred ccc--CCCcCCCcEEEEeeecCC
Q 024306 192 LVR--GSWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 192 ~i~--~~~~~~g~vViDv~~~~~ 212 (269)
.+. ...+++|.+|||++....
T Consensus 81 ~~~~~~~~~~~g~~viD~s~~~~ 103 (122)
T smart00859 81 IAPLLPKAAEAGVKVIDLSSAFR 103 (122)
T ss_pred HHHHHHhhhcCCCEEEECCcccc
Confidence 111 223578999999996643
No 422
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=94.50 E-value=0.088 Score=46.74 Aligned_cols=51 Identities=22% Similarity=0.302 Sum_probs=41.4
Q ss_pred EEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------------CHhhhcCCCCEEEeccCC
Q 024306 139 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 139 v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------------~l~~~~~~aDiVIsAtg~ 189 (269)
|+|.|+.|.+|+.+++.|.++|.+|+.+.|... ...+.+.+.|+||..++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCC
Confidence 589999999999999999999999999887532 122456779999988874
No 423
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=94.49 E-value=0.048 Score=49.79 Aligned_cols=57 Identities=33% Similarity=0.447 Sum_probs=42.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEE----------------eCC----------CCCHhhhcCCCCEEEecc
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV----------------HAL----------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~----------------~~~----------t~~l~~~~~~aDiVIsAt 187 (269)
-.+.+|.|+|++|-+|.|+..+|. ++..|+-+ |-. .++|++.+++||+||-+.
T Consensus 26 ~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPA 104 (345)
T KOG1494|consen 26 QRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPA 104 (345)
T ss_pred cCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecC
Confidence 457789999998888999998665 54444433 111 146889999999999999
Q ss_pred CCCC
Q 024306 188 GVAN 191 (269)
Q Consensus 188 g~p~ 191 (269)
|.|.
T Consensus 105 GVPR 108 (345)
T KOG1494|consen 105 GVPR 108 (345)
T ss_pred CCCC
Confidence 9765
No 424
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.059 Score=47.95 Aligned_cols=35 Identities=31% Similarity=0.208 Sum_probs=31.4
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|.++|.|+++.+|+.++..|+++|++|.++.|+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~ 36 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRN 36 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCC
Confidence 57889999999889999999999999998888664
No 425
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.061 Score=48.69 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=34.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++.+|+.++..|+++|++|.++.+.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999989999999999999999888654
No 426
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.44 E-value=0.052 Score=49.25 Aligned_cols=39 Identities=33% Similarity=0.372 Sum_probs=35.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
..++||.++|-|++.-+|+++|..|++.||+|+++.|+.
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~ 42 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSE 42 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357999999999988889999999999999999998763
No 427
>PLN02253 xanthoxin dehydrogenase
Probab=94.42 E-value=0.067 Score=47.67 Aligned_cols=37 Identities=32% Similarity=0.472 Sum_probs=33.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++||+++|.|+++-+|+++++.|+++|++|.++.+.
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4689999999999889999999999999999888654
No 428
>PRK05693 short chain dehydrogenase; Provisional
Probab=94.42 E-value=0.082 Score=46.98 Aligned_cols=33 Identities=12% Similarity=0.015 Sum_probs=29.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
|+++|.|+++-+|+.+++.|+++|++|+++.|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARK 34 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 679999998888999999999999999988765
No 429
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=94.42 E-value=0.07 Score=49.13 Aligned_cols=36 Identities=17% Similarity=0.045 Sum_probs=32.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
++++|+|+|.|++|.+|+.++..|.++|++|+++.+
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r 38 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIR 38 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEec
Confidence 678999999999988999999999999999887644
No 430
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=94.41 E-value=0.097 Score=47.95 Aligned_cols=92 Identities=26% Similarity=0.291 Sum_probs=59.2
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCCC-------------------C---H
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTK-------------------N---P 173 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~-Vti~~~~t~-------------------~---l 173 (269)
+|....++..++..++ ..|.+|+|+|+|+ +|..+++++..+|++ |+++.+... + +
T Consensus 146 ~~~~~ta~~~l~~~~~-~~g~~vlV~G~G~-vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~ 223 (339)
T cd08239 146 LCGIGTAYHALRRVGV-SGRDTVLVVGAGP-VGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEI 223 (339)
T ss_pred cchHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHH
Confidence 3333334455554443 3599999999865 599999999999998 887754310 1 1
Q ss_pred hhhcC--CCCEEEeccCCCCccc--CCCcCCCcEEEEeeec
Q 024306 174 EQITS--EADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 174 ~~~~~--~aDiVIsAtg~p~~i~--~~~~~~g~vViDv~~~ 210 (269)
.+... .+|+||.++|.+..+. -+.++++..++-++..
T Consensus 224 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 264 (339)
T cd08239 224 RELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEG 264 (339)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCC
Confidence 12222 5899999998754322 2456777677777754
No 431
>PRK12827 short chain dehydrogenase; Provisional
Probab=94.41 E-value=0.066 Score=46.29 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=31.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
++++++++|.|+++.+|+.+++.|+++|++|+++.+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 367899999999999999999999999999887543
No 432
>PRK08643 acetoin reductase; Validated
Probab=94.40 E-value=0.062 Score=47.08 Aligned_cols=34 Identities=26% Similarity=0.257 Sum_probs=31.1
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+|+++|+|+++.+|+.+++.|+++|++|.++.|.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999999999999999999999999888764
No 433
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=94.39 E-value=0.086 Score=48.60 Aligned_cols=54 Identities=24% Similarity=0.271 Sum_probs=47.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAG 188 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg 188 (269)
|+||+|+|||.|.- |++=+..|...|.+|++-.|.. .+..+++++||+|..-+|
T Consensus 16 LkgK~iaIIGYGsQ-G~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~P 83 (338)
T COG0059 16 LKGKKVAIIGYGSQ-GHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLP 83 (338)
T ss_pred hcCCeEEEEecChH-HHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCc
Confidence 68999999999887 9999999999999999887652 256789999999999998
No 434
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.38 E-value=0.069 Score=46.20 Aligned_cols=36 Identities=25% Similarity=0.242 Sum_probs=31.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
++++|+++|.|+++.+|+.++..|.++|++|.++.+
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~ 37 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYA 37 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence 467899999999888999999999999999877654
No 435
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.37 E-value=0.069 Score=47.38 Aligned_cols=36 Identities=25% Similarity=0.307 Sum_probs=31.2
Q ss_pred CCCccceEEEEcCC---cccHHHHHHHHHhCCCEEEEEeC
Q 024306 132 VEIMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 132 ~~l~gk~v~ViG~g---g~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.+++||.++|.|++ |+ |+++++.|+++|++|.++.|
T Consensus 3 ~~~~~k~~lItGa~~s~GI-G~aia~~la~~G~~v~~~~r 41 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSI-AWGIARSLHNAGAKLVFTYA 41 (257)
T ss_pred cccCCCEEEEECCCCCCCH-HHHHHHHHHHCCCEEEEecC
Confidence 35789999999985 65 99999999999999988754
No 436
>PRK05086 malate dehydrogenase; Provisional
Probab=94.37 E-value=0.12 Score=47.81 Aligned_cols=55 Identities=27% Similarity=0.432 Sum_probs=39.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHh-CC--CEEEEEeCC-----------------------CCCHhhhcCCCCEEEeccCCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQR-HH--ATVSIVHAL-----------------------TKNPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~-~g--a~Vti~~~~-----------------------t~~l~~~~~~aDiVIsAtg~p 190 (269)
++++|||++|.+|.++++.|.. .+ ..++++.+. ..++.+.++++|+||.+.|.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~ 80 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA 80 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence 4799999955579999998854 33 356666431 123456788999999999975
Q ss_pred C
Q 024306 191 N 191 (269)
Q Consensus 191 ~ 191 (269)
+
T Consensus 81 ~ 81 (312)
T PRK05086 81 R 81 (312)
T ss_pred C
Confidence 4
No 437
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.36 E-value=0.063 Score=46.40 Aligned_cols=37 Identities=27% Similarity=0.378 Sum_probs=32.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++++++|.|+++.+|+.++..|.++|+.|++..++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~ 39 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR 39 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 4689999999998889999999999999988776544
No 438
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.35 E-value=0.13 Score=47.60 Aligned_cols=52 Identities=21% Similarity=0.436 Sum_probs=39.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC-------------------------CCHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t-------------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
.+|.|||+|. ||..+++.|+.++. ++.+++.+. .+ .+.+++|||||.+.|.
T Consensus 4 ~Ki~IiGaG~-VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~d-y~~~~~adivvitaG~ 81 (312)
T cd05293 4 NKVTVVGVGQ-VGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKD-YSVTANSKVVIVTAGA 81 (312)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCC-HHHhCCCCEEEECCCC
Confidence 4899999966 59999999988884 577775431 12 2458999999998886
Q ss_pred C
Q 024306 190 A 190 (269)
Q Consensus 190 p 190 (269)
|
T Consensus 82 ~ 82 (312)
T cd05293 82 R 82 (312)
T ss_pred C
Confidence 4
No 439
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.34 E-value=0.067 Score=46.98 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=33.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++|+++|+|+++.+|+.+++.|.++|++|.++.++
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~ 44 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 3679999999999999999999999999998877654
No 440
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=94.34 E-value=0.083 Score=38.40 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=29.3
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++|||+|-. |--+|..|.+.|.+|+++++..
T Consensus 1 ~vvViGgG~i-g~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 1 RVVVIGGGFI-GIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp EEEEESSSHH-HHHHHHHHHHTTSEEEEEESSS
T ss_pred CEEEECcCHH-HHHHHHHHHHhCcEEEEEeccc
Confidence 5899999886 9999999999999999998874
No 441
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=94.34 E-value=0.095 Score=47.77 Aligned_cols=52 Identities=19% Similarity=0.284 Sum_probs=42.0
Q ss_pred EEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------CHhhhcC-CCCEEEeccCCC
Q 024306 139 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NPEQITS-EADIVIAAAGVA 190 (269)
Q Consensus 139 v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------~l~~~~~-~aDiVIsAtg~p 190 (269)
|+|-|+.|.+|++++..|.+.|.+|+++.|+.+ .+.+... .+|+|||-.|.|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCc
Confidence 478899999999999999999999999988742 2333344 599999999964
No 442
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.32 E-value=0.11 Score=52.86 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=31.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.|++|+|||+|-+ |..+|..|+++|++|+|+.+.
T Consensus 326 ~~~~VaIIGaGpA-GLsaA~~L~~~G~~V~V~E~~ 359 (654)
T PRK12769 326 SDKRVAIIGAGPA-GLACADVLARNGVAVTVYDRH 359 (654)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEecC
Confidence 5899999999998 999999999999999999653
No 443
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=94.31 E-value=0.061 Score=52.20 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=34.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+|+|||+|.+ |.-++-.|...|++|+++.|+
T Consensus 171 ~~~~GKrV~VIG~GaS-A~di~~~l~~~ga~vt~~qRs 207 (443)
T COG2072 171 EDLRGKRVLVIGAGAS-AVDIAPELAEVGASVTLSQRS 207 (443)
T ss_pred cccCCCeEEEECCCcc-HHHHHHHHHhcCCeeEEEecC
Confidence 5789999999999999 999999999999999999876
No 444
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=94.28 E-value=0.057 Score=50.13 Aligned_cols=78 Identities=15% Similarity=0.159 Sum_probs=51.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC-CCC---HhhhcCCCCEEEeccCCC--CcccCCCcCCCcEEEEeee
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL-TKN---PEQITSEADIVIAAAGVA--NLVRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~-t~~---l~~~~~~aDiVIsAtg~p--~~i~~~~~~~g~vViDv~~ 209 (269)
-+|.|+|++|.+|.-+.++|.++.- ++.-..+. ..+ ..+...++|+||.|++.. .-+-+...+.|+.|||.+.
T Consensus 3 ~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~~~~~~~~~~~~~DvvFlalp~~~s~~~~~~~~~~g~~VIDlSa 82 (313)
T PRK11863 3 PKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRKDAAARRELLNAADVAILCLPDDAAREAVALIDNPATRVIDAST 82 (313)
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCCcccCchhhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEEECCh
Confidence 4799999999999999999987762 43333222 112 233446799999999731 1122333467899999997
Q ss_pred cCCCC
Q 024306 210 CPVDD 214 (269)
Q Consensus 210 ~~~~~ 214 (269)
...-+
T Consensus 83 dfRl~ 87 (313)
T PRK11863 83 AHRTA 87 (313)
T ss_pred hhhcC
Confidence 65433
No 445
>PRK07985 oxidoreductase; Provisional
Probab=94.26 E-value=0.072 Score=48.33 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=32.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.++||+++|.|+++-+|+++++.|+++|++|.++.+
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~ 81 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL 81 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 478999999999888999999999999999888754
No 446
>PRK07677 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.065 Score=46.97 Aligned_cols=34 Identities=21% Similarity=0.197 Sum_probs=31.0
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
||+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~ 34 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRT 34 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999999989999999999999999888765
No 447
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=94.25 E-value=0.11 Score=50.11 Aligned_cols=76 Identities=18% Similarity=0.195 Sum_probs=54.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------------CHhhhcCCCCEEEe
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------NPEQITSEADIVIA 185 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------------------~l~~~~~~aDiVIs 185 (269)
+..+|.|||-|-+ |.|+|..|++ +.+|+.+++... ...+.+++||++|.
T Consensus 5 ~~mkI~vIGlGyv-GlpmA~~la~-~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii 82 (425)
T PRK15182 5 DEVKIAIIGLGYV-GLPLAVEFGK-SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTSEIEKIKECNFYII 82 (425)
T ss_pred CCCeEEEECcCcc-hHHHHHHHhc-CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEE
Confidence 4468999999886 9999999877 688999876521 11235789999999
Q ss_pred ccCCCC---------ccc------CCCcCCCcEEEEeeecCC
Q 024306 186 AAGVAN---------LVR------GSWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 186 Atg~p~---------~i~------~~~~~~g~vViDv~~~~~ 212 (269)
++|.|. .+. ...+++|.+|||...-+.
T Consensus 83 ~Vptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~p 124 (425)
T PRK15182 83 TVPTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVYP 124 (425)
T ss_pred EcCCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 999762 111 123577899999876653
No 448
>PRK07109 short chain dehydrogenase; Provisional
Probab=94.24 E-value=0.044 Score=50.89 Aligned_cols=37 Identities=27% Similarity=0.231 Sum_probs=33.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++|+++|.|+++-+|+.+++.|+++|++|+++.|+
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~ 41 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARG 41 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4678999999998888999999999999999988775
No 449
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.23 E-value=0.054 Score=47.11 Aligned_cols=34 Identities=32% Similarity=0.394 Sum_probs=31.0
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+|+++|.|+++.+|+.++..|.++|++|+++.|.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLG 34 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999999999999998765
No 450
>PRK05993 short chain dehydrogenase; Provisional
Probab=94.22 E-value=0.063 Score=48.03 Aligned_cols=35 Identities=20% Similarity=0.130 Sum_probs=31.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+|+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36889999998878999999999999999998775
No 451
>PLN02206 UDP-glucuronate decarboxylase
Probab=94.22 E-value=0.11 Score=50.50 Aligned_cols=36 Identities=25% Similarity=0.242 Sum_probs=32.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.-++++|+|.|+.|.||+.++..|.++|.+|.++.+
T Consensus 116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~ 151 (442)
T PLN02206 116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDN 151 (442)
T ss_pred ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeC
Confidence 347899999999999999999999999999888754
No 452
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.20 E-value=0.081 Score=46.02 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=31.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
+++|+++|.|+++.+|+.++..|+++|++|.++.+
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~ 37 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH 37 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence 57899999999988999999999999999877643
No 453
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=94.20 E-value=0.084 Score=55.97 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=32.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
-.||+|+|||+|-+ |.++|..|+++|.+|+|+.+.
T Consensus 304 ~~gkkVaVIGsGPA-GLsaA~~Lar~G~~VtVfE~~ 338 (944)
T PRK12779 304 AVKPPIAVVGSGPS-GLINAYLLAVEGFPVTVFEAF 338 (944)
T ss_pred CCCCeEEEECCCHH-HHHHHHHHHHCCCeEEEEeeC
Confidence 36999999999999 999999999999999999654
No 454
>PRK09135 pteridine reductase; Provisional
Probab=94.18 E-value=0.079 Score=45.81 Aligned_cols=36 Identities=19% Similarity=0.138 Sum_probs=32.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++++++|.|+++.+|+.+++.|+++|++|.++.|+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 467899999999999999999999999999888764
No 455
>PRK14030 glutamate dehydrogenase; Provisional
Probab=94.18 E-value=0.14 Score=49.82 Aligned_cols=51 Identities=22% Similarity=0.260 Sum_probs=42.1
Q ss_pred cccCCHHHHHHH----HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEE
Q 024306 115 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 166 (269)
Q Consensus 115 ~~p~t~~g~~~~----l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~ 166 (269)
-.+.|++|++.. +++.+.+++|++|+|=|.|.+ |..+|+.|.+.||+|..+
T Consensus 203 r~~ATg~Gv~~~~~~~~~~~g~~l~g~~vaIQGfGnV-G~~aA~~L~e~GakvVav 257 (445)
T PRK14030 203 RPEATGFGALYFVHQMLETKGIDIKGKTVAISGFGNV-AWGAATKATELGAKVVTI 257 (445)
T ss_pred CCCccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEE
Confidence 346799887544 456788999999999999885 999999999999996663
No 456
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.18 E-value=0.081 Score=48.50 Aligned_cols=38 Identities=26% Similarity=0.218 Sum_probs=33.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||.++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 34789999999998777999999999999999988764
No 457
>PRK06198 short chain dehydrogenase; Provisional
Probab=94.17 E-value=0.069 Score=46.81 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=33.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~-Vti~~~~ 169 (269)
.+++|+++|.|+++.+|+.+++.|.++|++ |.++.|.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~ 40 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRN 40 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCC
Confidence 468999999999988999999999999998 8888765
No 458
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.17 E-value=0.088 Score=48.54 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=31.0
Q ss_pred CCCCccceEEEEcC---CcccHHHHHHHHHhCCCEEEEE
Q 024306 131 GVEIMGKNAVVIGR---SNIVGLPTSLLLQRHHATVSIV 166 (269)
Q Consensus 131 ~~~l~gk~v~ViG~---gg~vg~~~a~~L~~~ga~Vti~ 166 (269)
..+++||.++|-|+ +|+ |+++|+.|+++||+|.+.
T Consensus 4 ~~~l~gk~alITGa~~s~GI-G~a~A~~la~~Ga~Vv~~ 41 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGY-GWAIAKALAAAGAEILVG 41 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcH-HHHHHHHHHHCCCEEEEE
Confidence 35689999999999 665 999999999999998883
No 459
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.15 E-value=0.12 Score=50.32 Aligned_cols=120 Identities=17% Similarity=0.131 Sum_probs=63.8
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCc-CCCcEEEEeeecCCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWL-KPGAVVLDVGTCPVD 213 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~-~~g~vViDv~~~~~~ 213 (269)
.||+|+|+|.|.. |+++++.|. +|++|++.+.........-+..+..+ .+. + +.+.+ ....+|+-=|+++..
T Consensus 5 ~~~~v~v~G~G~s-G~a~~~~L~-~g~~v~v~D~~~~~~~~~~~~~~~~~--~~~-~--~~~~~~~~d~vV~SPgI~~~~ 77 (454)
T PRK01368 5 TKQKIGVFGLGKT-GISVYEELQ-NKYDVIVYDDLKANRDIFEELYSKNA--IAA-L--SDSRWQNLDKIVLSPGIPLTH 77 (454)
T ss_pred CCCEEEEEeecHH-HHHHHHHHh-CCCEEEEECCCCCchHHHHhhhcCce--ecc-C--ChhHhhCCCEEEECCCCCCCC
Confidence 5899999999998 999999998 59999999854322211000001111 110 0 00111 112333333333210
Q ss_pred CCC----CCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHH
Q 024306 214 DPS----CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 214 ~~~----~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~ 262 (269)
|. ...+-++++++++-........+.-|-|=-|.=|+.-|+.++++..
T Consensus 78 -p~~~~a~~~gi~v~~e~el~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~ 129 (454)
T PRK01368 78 -EIVKIAKNFNIPITSDIDLLFEKSKNLKFIAITGTNGKSTTTALISHILNSN 129 (454)
T ss_pred -HHHHHHHHCCCceecHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHHHHHhc
Confidence 00 0012257777776321111112334567889999999999888753
No 460
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.14 E-value=0.077 Score=49.15 Aligned_cols=36 Identities=28% Similarity=0.159 Sum_probs=32.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||+++|.|++|.+|+.++..|.++|++|+++.|.
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~ 37 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLD 37 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCC
Confidence 478999999998888999999999999999887654
No 461
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=94.12 E-value=0.17 Score=47.28 Aligned_cols=76 Identities=22% Similarity=0.237 Sum_probs=50.5
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC-------------------CCHh----hhcC-CCCEEEeccC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPE----QITS-EADIVIAAAG 188 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t-------------------~~l~----~~~~-~aDiVIsAtg 188 (269)
-.|.+|+|.|+|+ +|..+++++..+|+ .|+++.++. .++. +... .+|+||.++|
T Consensus 190 ~~g~~VlV~G~G~-vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G 268 (371)
T cd08281 190 RPGQSVAVVGLGG-VGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAG 268 (371)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCC
Confidence 3689999999865 59999999999999 577664331 1111 1111 4799999998
Q ss_pred CCCccc--CCCcCCCcEEEEeeec
Q 024306 189 VANLVR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 189 ~p~~i~--~~~~~~g~vViDv~~~ 210 (269)
.+..+. -+.++++-.++-++..
T Consensus 269 ~~~~~~~~~~~l~~~G~iv~~G~~ 292 (371)
T cd08281 269 SVPALETAYEITRRGGTTVTAGLP 292 (371)
T ss_pred ChHHHHHHHHHHhcCCEEEEEccC
Confidence 754332 2346676666667653
No 462
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.11 E-value=0.09 Score=45.24 Aligned_cols=35 Identities=23% Similarity=0.231 Sum_probs=31.9
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+|+++|.|+++.+|+.+++.|+++|++|.++.|+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~ 36 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS 36 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999999999888775
No 463
>PRK08267 short chain dehydrogenase; Provisional
Probab=94.10 E-value=0.064 Score=47.15 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=30.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
|+++|+|+++.+|+.++..|+++|++|.++.|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 689999999999999999999999999988764
No 464
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=94.09 E-value=0.22 Score=44.90 Aligned_cols=91 Identities=14% Similarity=0.082 Sum_probs=57.9
Q ss_pred CCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCH----h
Q 024306 118 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNP----E 174 (269)
Q Consensus 118 ~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l----~ 174 (269)
+.+..++..++.. .--.|.+++|.|+++.+|.++++++..+|++|+++.+.. .++ .
T Consensus 123 ~~~~ta~~~~~~~-~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~ 201 (324)
T cd08292 123 AMPLSALMLLDFL-GVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVR 201 (324)
T ss_pred ccHHHHHHHHHhh-CCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHH
Confidence 3334444444332 223689999999988889999999999999876664321 111 1
Q ss_pred hhc--CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeee
Q 024306 175 QIT--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 175 ~~~--~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~ 209 (269)
+.. +..|+|++++|.+.. -.-..++++..+++++.
T Consensus 202 ~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (324)
T cd08292 202 EAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGS 239 (324)
T ss_pred HHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEec
Confidence 222 248999988886432 11234667777888874
No 465
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=94.09 E-value=0.056 Score=50.67 Aligned_cols=78 Identities=18% Similarity=0.217 Sum_probs=53.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCC---CEEEEEeCCC---------------CCHhhh-cCCCCEEEeccCCCC--cc
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALT---------------KNPEQI-TSEADIVIAAAGVAN--LV 193 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~g---a~Vti~~~~t---------------~~l~~~-~~~aDiVIsAtg~p~--~i 193 (269)
++.+|.|+|++|.+|+-+.++|.++. .++..+.+.. .++.+. ..++|+++.|+|..- -+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~~~~~~~~~~~Dvvf~a~p~~~s~~~ 82 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQDAAEFDWSQAQLAFFVAGREASAAY 82 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEEeCchhhccCCCEEEECCCHHHHHHH
Confidence 45689999999999999999999852 4666554431 012222 267899999997421 23
Q ss_pred cCCCcCCCcEEEEeeecCC
Q 024306 194 RGSWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 194 ~~~~~~~g~vViDv~~~~~ 212 (269)
-++..+.|+.|||.+-...
T Consensus 83 ~~~~~~~g~~VIDlS~~fR 101 (336)
T PRK08040 83 AEEATNAGCLVIDSSGLFA 101 (336)
T ss_pred HHHHHHCCCEEEECChHhc
Confidence 3344567999999986543
No 466
>PRK08328 hypothetical protein; Provisional
Probab=94.05 E-value=0.081 Score=46.81 Aligned_cols=36 Identities=14% Similarity=0.340 Sum_probs=31.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~ 169 (269)
.+++++|+|+|+||. |.+++..|+..|. ++++++..
T Consensus 24 ~L~~~~VlIiG~GGl-Gs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 24 KLKKAKVAVVGVGGL-GSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred HHhCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcCC
Confidence 367899999999997 9999999999997 69998643
No 467
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=94.02 E-value=0.17 Score=47.03 Aligned_cols=52 Identities=15% Similarity=-0.001 Sum_probs=36.5
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
||....++..+.+...--.|.+|+|.|++|.||..+++++..+|++|+.+.+
T Consensus 140 ~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~ 191 (348)
T PLN03154 140 GMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAG 191 (348)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcC
Confidence 3333344444544333347999999999777799999999999998766543
No 468
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.01 E-value=0.13 Score=52.06 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.||+|+|||+|-+ |..+|..|+++|++|+++.+.
T Consensus 309 ~~kkVaIIG~Gpa-Gl~aA~~L~~~G~~Vtv~e~~ 342 (639)
T PRK12809 309 RSEKVAVIGAGPA-GLGCADILARAGVQVDVFDRH 342 (639)
T ss_pred CCCEEEEECcCHH-HHHHHHHHHHcCCcEEEEeCC
Confidence 5999999999998 999999999999999999644
No 469
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=94.01 E-value=0.12 Score=47.38 Aligned_cols=51 Identities=25% Similarity=0.390 Sum_probs=40.1
Q ss_pred EEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCC-------------------------CCHhhhcCCCCEEEeccCCCC
Q 024306 139 AVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT-------------------------KNPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 139 v~ViG~gg~vg~~~a~~L~~~g--a~Vti~~~~t-------------------------~~l~~~~~~aDiVIsAtg~p~ 191 (269)
+.|||+|. ||.+++..|+.+| .++++++... .+ .+.+++||+||.+.|.|.
T Consensus 1 i~iiGaG~-VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGAGN-VGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence 47999988 5999999999988 4688886531 12 457889999999999653
No 470
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.99 E-value=0.16 Score=47.37 Aligned_cols=56 Identities=11% Similarity=0.194 Sum_probs=41.8
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC-------EEEEEeCCC--------------------------CCHhhhcCCCCE
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHA-------TVSIVHALT--------------------------KNPEQITSEADI 182 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga-------~Vti~~~~t--------------------------~~l~~~~~~aDi 182 (269)
-.+|.|||++|.||..++..|..++. ++.+.+... .+..+.+++||+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDi 81 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADW 81 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCE
Confidence 46899999955579999999988773 577765421 123467899999
Q ss_pred EEeccCCCC
Q 024306 183 VIAAAGVAN 191 (269)
Q Consensus 183 VIsAtg~p~ 191 (269)
||.+.|.|.
T Consensus 82 vvitaG~~~ 90 (322)
T cd01338 82 ALLVGAKPR 90 (322)
T ss_pred EEEeCCCCC
Confidence 999998643
No 471
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=93.98 E-value=0.091 Score=46.20 Aligned_cols=36 Identities=25% Similarity=0.252 Sum_probs=32.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
+++||+++|.|+++-+|+++++.|+++|++|..+++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~ 42 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINI 42 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecC
Confidence 578999999999988899999999999999887654
No 472
>PRK06483 dihydromonapterin reductase; Provisional
Probab=93.96 E-value=0.08 Score=45.84 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=31.4
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+|+++|.|+++-+|+++++.|+++|++|.++.|+.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTH 36 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc
Confidence 57899999988889999999999999999887754
No 473
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=93.95 E-value=0.11 Score=48.37 Aligned_cols=63 Identities=11% Similarity=0.129 Sum_probs=46.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhcCCCCEEEeccCCCCc---c-c--CCCcCCCcE
Q 024306 149 GLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSEADIVIAAAGVANL---V-R--GSWLKPGAV 203 (269)
Q Consensus 149 g~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~~~~aDiVIsAtg~p~~---i-~--~~~~~~g~v 203 (269)
|+++|..|++.|.+|++.+++. .+..+..+++|+||+.++.+.- + . .+.+++|++
T Consensus 32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L~~GaI 111 (341)
T TIGR01724 32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHVPENAV 111 (341)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcCCCCCE
Confidence 7788888888888888886541 2456788999999999986441 2 1 234688999
Q ss_pred EEEeeecC
Q 024306 204 VLDVGTCP 211 (269)
Q Consensus 204 ViDv~~~~ 211 (269)
|||.+...
T Consensus 112 VID~STIs 119 (341)
T TIGR01724 112 ICNTCTVS 119 (341)
T ss_pred EEECCCCC
Confidence 99998653
No 474
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=93.93 E-value=0.33 Score=43.08 Aligned_cols=89 Identities=21% Similarity=0.223 Sum_probs=57.3
Q ss_pred HHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CC----Hhhhc-
Q 024306 122 GCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KN----PEQIT- 177 (269)
Q Consensus 122 g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~----l~~~~- 177 (269)
.+...+.+...--+|++++|.|+++.+|..++.++..+|++|+++.++. .+ +.+..
T Consensus 131 ~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 210 (325)
T cd08253 131 TAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATA 210 (325)
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcC
Confidence 3344444433334789999999877779999999999999987775421 11 11222
Q ss_pred -CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeec
Q 024306 178 -SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 178 -~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
+..|++++++|.... ...++++++..+++++..
T Consensus 211 ~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 211 GQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred CCceEEEEECCchHHHHHHHHhhCCCCEEEEEeec
Confidence 347888888775432 223456666677788764
No 475
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.93 E-value=0.089 Score=45.86 Aligned_cols=36 Identities=25% Similarity=0.349 Sum_probs=33.1
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|+++|.|+++.+|..+++.|+++|++|.++.|+
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence 589999999999999999999999999999888765
No 476
>PRK06128 oxidoreductase; Provisional
Probab=93.93 E-value=0.093 Score=47.60 Aligned_cols=36 Identities=19% Similarity=0.410 Sum_probs=32.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.++||+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~ 87 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYL 87 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence 378999999999888999999999999999887643
No 477
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.93 E-value=0.09 Score=46.96 Aligned_cols=36 Identities=17% Similarity=0.264 Sum_probs=30.6
Q ss_pred CccceEEEEcCCc--ccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSN--IVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg--~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||.++|.|+|+ -+|+++++.|+++|++|.++.+.
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 6799999999872 34999999999999999887654
No 478
>PRK06444 prephenate dehydrogenase; Provisional
Probab=93.91 E-value=0.12 Score=44.85 Aligned_cols=56 Identities=13% Similarity=0.254 Sum_probs=41.2
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcCCCCEEEeccCCCC---cccCCCcCCCcEEEEeee
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVAN---LVRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~---~i~~~~~~~g~vViDv~~ 209 (269)
+++|||+.|-+|+.++..|.+.|..|+ +++||+||-|++... .+.. + ..+|+|++.
T Consensus 2 ~~~iiG~~G~mG~~~~~~~~~~g~~v~------------~~~~DlVilavPv~~~~~~i~~--~--~~~v~Dv~S 60 (197)
T PRK06444 2 MEIIIGKNGRLGRVLCSILDDNGLGVY------------IKKADHAFLSVPIDAALNYIES--Y--DNNFVEISS 60 (197)
T ss_pred EEEEEecCCcHHHHHHHHHHhCCCEEE------------ECCCCEEEEeCCHHHHHHHHHH--h--CCeEEeccc
Confidence 689999944459999999999998886 468999999998422 2221 1 136778885
No 479
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=93.90 E-value=0.23 Score=47.54 Aligned_cols=75 Identities=23% Similarity=0.300 Sum_probs=54.4
Q ss_pred CCccceEEEEcCC---------cccHHHHHHHHHhCCCEEEEEeCCC-----------CCHhhhcCCCCEEEeccCCCCc
Q 024306 133 EIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGVANL 192 (269)
Q Consensus 133 ~l~gk~v~ViG~g---------g~vg~~~a~~L~~~ga~Vti~~~~t-----------~~l~~~~~~aDiVIsAtg~p~~ 192 (269)
+++|++|+|+|-+ .+-+..++..|.++|++|.+....- .++.+.+++||+||-.|..+.+
T Consensus 310 ~~~~~~v~vlGlafK~~t~d~r~sp~~~~~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~ad~~v~~t~~~~~ 389 (411)
T TIGR03026 310 PLKGKTVLILGLAFKPNTDDVRESPALDIIELLKEKGAKVKAYDPLVPEEEVKGLPLIDDLEEALKGADALVILTDHDEF 389 (411)
T ss_pred cccCCEEEEEeeEecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChhhhhhcccCCCHHHHHhCCCEEEEecCCHHH
Confidence 5789999999932 1226889999999999999986541 3566788999999999998766
Q ss_pred ccCC--CcC---CCcEEEEe
Q 024306 193 VRGS--WLK---PGAVVLDV 207 (269)
Q Consensus 193 i~~~--~~~---~g~vViDv 207 (269)
-..+ .++ ...+|+|.
T Consensus 390 ~~~~~~~~~~~~~~~~v~D~ 409 (411)
T TIGR03026 390 KDLDLEKIKDLMKGKVVVDT 409 (411)
T ss_pred hccCHHHHHHhcCCCEEEeC
Confidence 3222 222 13478884
No 480
>PRK06180 short chain dehydrogenase; Provisional
Probab=93.89 E-value=0.078 Score=47.35 Aligned_cols=35 Identities=14% Similarity=-0.082 Sum_probs=31.6
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+|+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC
Confidence 46889999998889999999999999999988764
No 481
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.86 E-value=0.1 Score=46.24 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=29.6
Q ss_pred CCccceEEEEcCC---cccHHHHHHHHHhCCCEEEEEe
Q 024306 133 EIMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVH 167 (269)
Q Consensus 133 ~l~gk~v~ViG~g---g~vg~~~a~~L~~~ga~Vti~~ 167 (269)
+++||.++|.|+| |. |+++++.|+++|++|.++.
T Consensus 3 ~l~~k~~lItGas~~~GI-G~aia~~la~~G~~v~~~~ 39 (258)
T PRK07370 3 DLTGKKALVTGIANNRSI-AWGIAQQLHAAGAELGITY 39 (258)
T ss_pred ccCCcEEEEeCCCCCCch-HHHHHHHHHHCCCEEEEEe
Confidence 4689999999974 65 9999999999999988764
No 482
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.85 E-value=0.1 Score=46.34 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=30.7
Q ss_pred CccceEEEEcCCc--ccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSN--IVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg--~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||.++|.|+++ -+|+++++.|+++|++|.++.+.
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~ 43 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS 43 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc
Confidence 6789999999973 24999999999999999887654
No 483
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=93.85 E-value=0.17 Score=46.99 Aligned_cols=76 Identities=25% Similarity=0.204 Sum_probs=51.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCC-------------------CCH----hhhc--CCCCEEEecc
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT-------------------KNP----EQIT--SEADIVIAAA 187 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~-Vti~~~~t-------------------~~l----~~~~--~~aDiVIsAt 187 (269)
-.|++|+|.|+|+ +|..+++++...|++ |+.+.+.. .+. .+.. +..|+||.++
T Consensus 175 ~~g~~VlV~G~g~-vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~ 253 (358)
T TIGR03451 175 KRGDSVAVIGCGG-VGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAV 253 (358)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 4689999999865 599999999999985 76664321 121 1222 2489999999
Q ss_pred CCCCccc--CCCcCCCcEEEEeeec
Q 024306 188 GVANLVR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 188 g~p~~i~--~~~~~~g~vViDv~~~ 210 (269)
|.+..+. -+.++++-.++-+|..
T Consensus 254 g~~~~~~~~~~~~~~~G~iv~~G~~ 278 (358)
T TIGR03451 254 GRPETYKQAFYARDLAGTVVLVGVP 278 (358)
T ss_pred CCHHHHHHHHHHhccCCEEEEECCC
Confidence 9754332 2356777777777754
No 484
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=93.85 E-value=0.24 Score=44.56 Aligned_cols=91 Identities=16% Similarity=0.108 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------------C--C----Hhhh
Q 024306 120 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------K--N----PEQI 176 (269)
Q Consensus 120 ~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-----------------~--~----l~~~ 176 (269)
+..+...+.+....-.|.+++|.|+++.+|.++++.+..+|+.|++..+.. . + +...
T Consensus 123 ~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 202 (323)
T cd05282 123 PLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEA 202 (323)
T ss_pred HHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHH
Confidence 333344444444445788999999988889999999999999877654321 0 1 1112
Q ss_pred c--CCCCEEEeccCCCCcc-cCCCcCCCcEEEEeeec
Q 024306 177 T--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 177 ~--~~aDiVIsAtg~p~~i-~~~~~~~g~vViDv~~~ 210 (269)
. +..|++++.+|.+... ..++++++..+++++..
T Consensus 203 ~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~ 239 (323)
T cd05282 203 TGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLL 239 (323)
T ss_pred hcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccC
Confidence 2 3579999988864321 12457777778888754
No 485
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=93.84 E-value=0.089 Score=46.14 Aligned_cols=34 Identities=24% Similarity=0.198 Sum_probs=30.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+|+++|.|+++.+|+.++..|+++|++|.++.++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~ 35 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADIN 35 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 6889999999999999999999999999888764
No 486
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=93.82 E-value=0.14 Score=45.72 Aligned_cols=52 Identities=19% Similarity=0.189 Sum_probs=40.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC---CEEEEEeCCC---------------CCHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALT---------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~g---a~Vti~~~~t---------------~~l~~~~~~aDiVIsAtg~ 189 (269)
.++.|||.|.+ |..++..|.+.| ..|++++|+. .+..+.+.++|+||-+++.
T Consensus 3 m~I~iIG~G~m-G~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~ 72 (267)
T PRK11880 3 KKIGFIGGGNM-ASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKP 72 (267)
T ss_pred CEEEEEechHH-HHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCH
Confidence 46999999886 999999999888 5788887752 2334557789999988863
No 487
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=93.81 E-value=0.18 Score=46.84 Aligned_cols=53 Identities=28% Similarity=0.365 Sum_probs=40.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC--------------------------CCHhhhcCCCCEEEeccC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT--------------------------KNPEQITSEADIVIAAAG 188 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t--------------------------~~l~~~~~~aDiVIsAtg 188 (269)
++|.|||+|+ ||.++++.|..++. ++.+++... .+ .+.+++||+||-+.|
T Consensus 1 ~KVaviGaG~-VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG 78 (313)
T COG0039 1 MKVAVIGAGN-VGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG 78 (313)
T ss_pred CeEEEECCCh-HHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence 4799999966 59999999988873 677775431 11 567899999998878
Q ss_pred CCC
Q 024306 189 VAN 191 (269)
Q Consensus 189 ~p~ 191 (269)
.|.
T Consensus 79 ~pr 81 (313)
T COG0039 79 VPR 81 (313)
T ss_pred CCC
Confidence 543
No 488
>PRK07831 short chain dehydrogenase; Provisional
Probab=93.81 E-value=0.099 Score=46.06 Aligned_cols=36 Identities=22% Similarity=0.190 Sum_probs=30.6
Q ss_pred CccceEEEEcCCc-ccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSN-IVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg-~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|+++|.|++| -+|+.+++.|+++|++|+++.++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~ 51 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIH 51 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCC
Confidence 5789999999853 35999999999999999988654
No 489
>PLN02583 cinnamoyl-CoA reductase
Probab=93.81 E-value=0.1 Score=47.37 Aligned_cols=36 Identities=22% Similarity=0.122 Sum_probs=32.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
+-++|+|+|.|++|.+|+.++..|.++|++|+.+.|
T Consensus 3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R 38 (297)
T PLN02583 3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQ 38 (297)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence 456889999999999999999999999999988765
No 490
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.80 E-value=0.1 Score=46.98 Aligned_cols=35 Identities=14% Similarity=0.219 Sum_probs=30.6
Q ss_pred CccceEEEEcCC---cccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~g---g~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||.++|.|++ |+ |+++|+.|+++|++|.++.|+
T Consensus 3 l~~k~~lItGas~~~GI-G~aiA~~la~~G~~Vil~~r~ 40 (274)
T PRK08415 3 MKGKKGLIVGVANNKSI-AYGIAKACFEQGAELAFTYLN 40 (274)
T ss_pred cCCcEEEEECCCCCCCH-HHHHHHHHHHCCCEEEEEecC
Confidence 579999999984 65 999999999999999888654
No 491
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=93.74 E-value=0.17 Score=42.20 Aligned_cols=74 Identities=22% Similarity=0.236 Sum_probs=48.9
Q ss_pred ccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC---------------------------CCCHhhhcCCCCEEEec
Q 024306 135 MGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL---------------------------TKNPEQITSEADIVIAA 186 (269)
Q Consensus 135 ~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~---------------------------t~~l~~~~~~aDiVIsA 186 (269)
+|++++++|-+ +-|.+.++..|...|.+++++... +.++.+.+++||+|++.
T Consensus 1 ~gl~i~~vGD~~~rv~~Sl~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~e~l~~aDvvy~~ 80 (158)
T PF00185_consen 1 KGLKIAYVGDGHNRVAHSLIELLAKFGMEVVLIAPEGLRYPPDPEVLEKAKKNAKKNGGKITITDDIEEALKGADVVYTD 80 (158)
T ss_dssp TTEEEEEESSTTSHHHHHHHHHHHHTTSEEEEESSGGGGGSHHHHHHHHHHHHHHHHTTEEEEESSHHHHHTT-SEEEEE
T ss_pred CCCEEEEECCCCChHHHHHHHHHHHcCCEEEEECCCcccCCCCHHHHHHHHHHHHHhCCCeEEEeCHHHhcCCCCEEEEc
Confidence 57888888853 345888888888888888877432 23667899999999855
Q ss_pred cCC----C----------Cc-ccCCCc---CCCcEEEEee
Q 024306 187 AGV----A----------NL-VRGSWL---KPGAVVLDVG 208 (269)
Q Consensus 187 tg~----p----------~~-i~~~~~---~~g~vViDv~ 208 (269)
.=. . .+ ++.+.+ +++++++-..
T Consensus 81 ~~~s~~~~e~~~~~~~~~~y~v~~~~m~~a~~~~i~mH~L 120 (158)
T PF00185_consen 81 RWQSMGDKERFKRLEKFKPYQVTEELMERAKPDAIFMHPL 120 (158)
T ss_dssp SSSCTTSGGHHHHHHHHGGGSBSHHHHHTSSTT-EEEESS
T ss_pred CcccccchHHHHHHHHhcCCccCHHHHHhcCCCcEEEeCC
Confidence 422 0 13 565554 4677776555
No 492
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=93.69 E-value=0.15 Score=47.27 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=28.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
-++|.|||+|-+ |+.+|..++.-|..|++...+
T Consensus 3 i~kv~ViGaG~M-G~gIA~~~A~~G~~V~l~D~~ 35 (307)
T COG1250 3 IKKVAVIGAGVM-GAGIAAVFALAGYDVVLKDIS 35 (307)
T ss_pred ccEEEEEcccch-hHHHHHHHhhcCCceEEEeCC
Confidence 378999999887 999999999966899999655
No 493
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=93.67 E-value=0.21 Score=46.20 Aligned_cols=54 Identities=30% Similarity=0.445 Sum_probs=41.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC----------------------------CCHhhhcCCCCEEEec
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------------------KNPEQITSEADIVIAA 186 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t----------------------------~~l~~~~~~aDiVIsA 186 (269)
.+|.|+|++|.||..++..|+..|. +|+++.+.. .+ .+.+++||+||.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEEe
Confidence 4799999966679999999999885 488776521 12 2458999999999
Q ss_pred cCCCC
Q 024306 187 AGVAN 191 (269)
Q Consensus 187 tg~p~ 191 (269)
.|.|.
T Consensus 80 ag~p~ 84 (309)
T cd05294 80 AGVPR 84 (309)
T ss_pred cCCCC
Confidence 99654
No 494
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.66 E-value=0.15 Score=48.28 Aligned_cols=72 Identities=18% Similarity=0.196 Sum_probs=50.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCC-------CEEEEEeCC---------------------------------CCCHhh
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHH-------ATVSIVHAL---------------------------------TKNPEQ 175 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~g-------a~Vti~~~~---------------------------------t~~l~~ 175 (269)
-.+|.|||+|.- |.++|..|.+.| .+|++..++ +.++.+
T Consensus 11 ~~ki~ViGaG~w-GtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~e 89 (365)
T PTZ00345 11 PLKVSVIGSGNW-GSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKE 89 (365)
T ss_pred CCeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHH
Confidence 358999999886 999999999886 577775332 235667
Q ss_pred hcCCCCEEEeccCCCC---c---ccCC-CcCCCcEEEEee
Q 024306 176 ITSEADIVIAAAGVAN---L---VRGS-WLKPGAVVLDVG 208 (269)
Q Consensus 176 ~~~~aDiVIsAtg~p~---~---i~~~-~~~~g~vViDv~ 208 (269)
.+++||+||-|++... . +.+. .++++.++|-+.
T Consensus 90 av~~aDiIvlAVPsq~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 90 AVEDADLLIFVIPHQFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred HHhcCCEEEEEcChHHHHHHHHHhccccccCCCCEEEEEe
Confidence 8899999999998532 1 3321 355565666554
No 495
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.66 E-value=0.18 Score=48.26 Aligned_cols=108 Identities=15% Similarity=0.171 Sum_probs=64.2
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHh--------------hhcCCCCEEEeccCCCC--cccCCCc
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPE--------------QITSEADIVIAAAGVAN--LVRGSWL 198 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~--------------~~~~~aDiVIsAtg~p~--~i~~~~~ 198 (269)
+.++|+|+|-|++ |+++|+.|.++|++|+.+++....+. ...+++|++|-+.|.+. .+=.+-.
T Consensus 2 ~~~~i~iiGlG~~-G~slA~~l~~~G~~V~g~D~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvV~s~gi~~~~~~l~~A~ 80 (418)
T PRK00683 2 GLQRVVVLGLGVT-GKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAEEFPEQVDLVVRSPGIKKEHPWVQAAI 80 (418)
T ss_pred CCCeEEEEEECHH-HHHHHHHHHHCCCEEEEEeCCccccchhHHHhhhhcCCcHHHhcCCCEEEECCCCCCCcHHHHHHH
Confidence 3578999999998 99999999999999999886532111 11356788887766431 1111112
Q ss_pred CCCcEEEEeeecCCCCCCCCCCceeecccchHHHh-hH-cceecccCCcccHHHHHHHHHHHHHHH
Q 024306 199 KPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAM-RL-ASVITPVPGGVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 199 ~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~-~~-~~~~tpvpgGvGp~T~~mLl~n~v~a~ 262 (269)
+.|.. ++.|.++.... .. .....-|-|=.|.=|+.-|+.++++..
T Consensus 81 ~~g~~-------------------vv~~~~~~~~~~~~~~~~~I~ITGT~GKTTTt~ml~~iL~~~ 127 (418)
T PRK00683 81 ASHIP-------------------VVTDIQLAFQTPEFTRYPSLGITGSTGKTTTILFLEHLLKRL 127 (418)
T ss_pred HCCCc-------------------EEEHHHHHHhhhhcCCCCEEEEECCCChHHHHHHHHHHHHHc
Confidence 33432 22222211100 00 011223457788889999988887653
No 496
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=93.65 E-value=0.092 Score=49.24 Aligned_cols=75 Identities=20% Similarity=0.212 Sum_probs=50.4
Q ss_pred ceEEEEcCCcccHHHHHHHHHhC-CCEEEE-EeCCCC--CH------------------h-hhcCCCCEEEeccCCC-C-
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRH-HATVSI-VHALTK--NP------------------E-QITSEADIVIAAAGVA-N- 191 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~-ga~Vti-~~~~t~--~l------------------~-~~~~~aDiVIsAtg~p-~- 191 (269)
.+|.|+|++|.+|+.++..|.++ +.+++. +.+... .+ . ....++|+|+.|++.. +
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~vD~Vf~alP~~~~~ 82 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPEILAGADVVFLALPHGVSM 82 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHHHhcCCCEEEECCCcHHHH
Confidence 58999999888899999998876 567544 432210 01 0 1345789999999842 1
Q ss_pred cccCCCcCCCcEEEEeeecC
Q 024306 192 LVRGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 192 ~i~~~~~~~g~vViDv~~~~ 211 (269)
-+-....+.|..|||.+-..
T Consensus 83 ~~v~~a~~aG~~VID~S~~f 102 (343)
T PRK00436 83 DLAPQLLEAGVKVIDLSADF 102 (343)
T ss_pred HHHHHHHhCCCEEEECCccc
Confidence 13334456799999998554
No 497
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=93.65 E-value=0.16 Score=46.49 Aligned_cols=51 Identities=24% Similarity=0.407 Sum_probs=38.8
Q ss_pred EEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------------CCHhhhcCCCCEEEeccCCCC
Q 024306 139 AVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 139 v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t--------------------------~~l~~~~~~aDiVIsAtg~p~ 191 (269)
|.|||+|. ||..++..|+.++. +|++++... .+ .+.+++||+||.++|.|.
T Consensus 1 I~IIGaG~-vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d-~~~l~dADiVIit~g~p~ 78 (300)
T cd01339 1 ISIIGAGN-VGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTND-YEDIAGSDVVVITAGIPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCC-HHHhCCCCEEEEecCCCC
Confidence 57999966 49999999988775 888886431 23 355899999999888653
No 498
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.64 E-value=0.15 Score=47.25 Aligned_cols=53 Identities=21% Similarity=0.249 Sum_probs=40.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC--------------------C-----CHhhhcCCCCEEEeccCCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT--------------------K-----NPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t--------------------~-----~l~~~~~~aDiVIsAtg~p 190 (269)
||.|||+|. ||.++|+.|..++. ++.+++... . .-.+.+++|||||-+.|.|
T Consensus 1 Ki~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~~ 79 (307)
T cd05290 1 KLVVIGAGH-VGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPS 79 (307)
T ss_pred CEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCCC
Confidence 589999977 59999999988884 577775431 0 1146789999999999964
Q ss_pred C
Q 024306 191 N 191 (269)
Q Consensus 191 ~ 191 (269)
.
T Consensus 80 ~ 80 (307)
T cd05290 80 I 80 (307)
T ss_pred C
Confidence 3
No 499
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=93.62 E-value=0.14 Score=52.68 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=28.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|.|||+|-+ |..+|..++..|..|++....
T Consensus 314 ~~v~ViGaG~m-G~gIA~~~a~~G~~V~l~d~~ 345 (715)
T PRK11730 314 KQAAVLGAGIM-GGGIAYQSASKGVPVIMKDIN 345 (715)
T ss_pred ceEEEECCchh-HHHHHHHHHhCCCeEEEEeCC
Confidence 67999999887 999999999999999999654
No 500
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=93.62 E-value=0.22 Score=45.66 Aligned_cols=89 Identities=13% Similarity=0.017 Sum_probs=55.0
Q ss_pred HHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhc--
Q 024306 121 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQIT-- 177 (269)
Q Consensus 121 ~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------~l~~~~-- 177 (269)
..++..+.+...--.|.+++|.|++|.+|..+++++..+|++|+.+.+... +..+.+
T Consensus 137 ~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~ 216 (338)
T cd08295 137 LTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKR 216 (338)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHH
Confidence 334445544333347999999999777899999999999998766543211 111111
Q ss_pred ---CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeee
Q 024306 178 ---SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 178 ---~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~ 209 (269)
...|++++++|...+ -.-+.++++..++.+|.
T Consensus 217 ~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~ 252 (338)
T cd08295 217 YFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGM 252 (338)
T ss_pred hCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecc
Confidence 246788877775222 12235667666667664
Done!