Query 024306
Match_columns 269
No_of_seqs 172 out of 1483
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 05:58:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024306.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024306hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b4u_A Bifunctional protein fo 100.0 1.5E-82 5.2E-87 574.8 25.2 256 3-267 48-303 (303)
2 4a26_A Putative C-1-tetrahydro 100.0 4.5E-81 1.5E-85 566.6 26.6 266 4-269 32-300 (300)
3 4a5o_A Bifunctional protein fo 100.0 3.2E-80 1.1E-84 557.2 26.8 257 3-267 30-286 (286)
4 3p2o_A Bifunctional protein fo 100.0 8.9E-80 3.1E-84 554.5 26.5 254 6-267 31-285 (285)
5 3l07_A Bifunctional protein fo 100.0 1.3E-79 4.3E-84 553.5 24.8 255 4-266 30-284 (285)
6 1a4i_A Methylenetetrahydrofola 100.0 3.7E-79 1.3E-83 553.7 27.7 262 6-267 33-296 (301)
7 1b0a_A Protein (fold bifunctio 100.0 6.5E-79 2.2E-83 549.2 25.2 256 4-267 29-284 (288)
8 3ngx_A Bifunctional protein fo 100.0 9.6E-78 3.3E-82 538.7 25.9 250 5-266 24-273 (276)
9 2c2x_A Methylenetetrahydrofola 100.0 2.1E-76 7.1E-81 531.2 26.4 249 6-264 30-280 (281)
10 1edz_A 5,10-methylenetetrahydr 100.0 2.2E-62 7.6E-67 449.3 21.2 238 7-265 35-314 (320)
11 3fbt_A Chorismate mutase and s 100.0 5.5E-37 1.9E-41 277.4 13.4 218 16-269 11-255 (282)
12 3tnl_A Shikimate dehydrogenase 100.0 3.9E-36 1.3E-40 275.7 14.5 221 15-269 42-304 (315)
13 1nyt_A Shikimate 5-dehydrogena 100.0 1.1E-36 3.6E-41 273.5 9.5 220 16-268 7-255 (271)
14 3jyo_A Quinate/shikimate dehyd 100.0 3.8E-35 1.3E-39 265.5 13.1 223 15-269 9-270 (283)
15 1p77_A Shikimate 5-dehydrogena 100.0 8.4E-36 2.9E-40 267.9 8.2 220 16-268 7-256 (272)
16 3don_A Shikimate dehydrogenase 100.0 3.3E-35 1.1E-39 265.2 11.1 220 16-269 6-251 (277)
17 2egg_A AROE, shikimate 5-dehyd 100.0 8.1E-35 2.8E-39 264.9 13.1 219 16-268 29-280 (297)
18 1nvt_A Shikimate 5'-dehydrogen 100.0 5.6E-35 1.9E-39 264.1 10.9 219 15-268 16-270 (287)
19 3pwz_A Shikimate dehydrogenase 100.0 8.7E-35 3E-39 261.8 10.1 221 16-269 8-257 (272)
20 3t4e_A Quinate/shikimate dehyd 100.0 1.5E-34 5.1E-39 264.9 10.9 220 16-269 37-298 (312)
21 3o8q_A Shikimate 5-dehydrogena 100.0 1.8E-34 6E-39 260.9 9.7 222 15-269 13-263 (281)
22 3tum_A Shikimate dehydrogenase 100.0 2E-34 6.8E-39 259.0 8.8 221 15-269 11-265 (269)
23 2hk9_A Shikimate dehydrogenase 100.0 1.4E-32 4.9E-37 247.0 14.2 218 15-268 17-259 (275)
24 2d5c_A AROE, shikimate 5-dehyd 100.0 7.7E-32 2.6E-36 240.3 14.2 217 15-268 6-246 (263)
25 3phh_A Shikimate dehydrogenase 100.0 1.2E-32 4E-37 247.4 7.2 213 16-269 9-249 (269)
26 1npy_A Hypothetical shikimate 100.0 1.7E-31 5.7E-36 240.3 9.4 215 15-268 12-253 (271)
27 3u62_A Shikimate dehydrogenase 100.0 3.6E-31 1.2E-35 235.9 8.1 212 16-269 6-240 (253)
28 2o7s_A DHQ-SDH PR, bifunctiona 99.9 5.6E-24 1.9E-28 207.0 6.8 218 15-268 239-500 (523)
29 2dvm_A Malic enzyme, 439AA lon 99.8 7.2E-20 2.5E-24 174.1 6.2 200 21-262 82-330 (439)
30 1lu9_A Methylene tetrahydromet 99.7 5.1E-19 1.7E-23 159.2 0.1 221 19-268 2-270 (287)
31 2rir_A Dipicolinate synthase, 99.2 1.8E-10 6.2E-15 103.9 11.7 120 128-263 149-291 (300)
32 3oj0_A Glutr, glutamyl-tRNA re 99.1 2.3E-10 7.9E-15 91.9 8.4 92 119-215 8-117 (144)
33 3d4o_A Dipicolinate synthase s 99.0 1.7E-09 5.7E-14 97.3 10.8 128 119-262 137-288 (293)
34 1vl6_A Malate oxidoreductase; 99.0 3.9E-09 1.3E-13 98.5 12.0 166 26-212 96-297 (388)
35 1pjc_A Protein (L-alanine dehy 98.9 2.8E-10 9.7E-15 105.5 3.7 156 32-211 82-270 (361)
36 1gpj_A Glutamyl-tRNA reductase 98.8 4.4E-09 1.5E-13 98.8 5.9 139 120-267 151-323 (404)
37 2a9f_A Putative malic enzyme ( 98.8 2.5E-08 8.5E-13 93.3 10.3 166 26-212 92-292 (398)
38 3h9u_A Adenosylhomocysteinase; 98.7 3E-08 1E-12 93.9 9.6 92 117-209 192-299 (436)
39 3n58_A Adenosylhomocysteinase; 98.6 6.2E-08 2.1E-12 92.0 8.9 90 121-211 231-337 (464)
40 3gvp_A Adenosylhomocysteinase 98.6 8.1E-08 2.8E-12 90.9 9.6 92 120-212 203-311 (435)
41 3p2y_A Alanine dehydrogenase/p 98.6 6.1E-08 2.1E-12 90.5 8.6 122 134-263 182-351 (381)
42 3d64_A Adenosylhomocysteinase; 98.4 3.7E-07 1.3E-11 87.9 8.5 83 129-212 270-368 (494)
43 4dio_A NAD(P) transhydrogenase 98.4 3.5E-07 1.2E-11 86.0 7.3 123 133-263 187-361 (405)
44 3jtm_A Formate dehydrogenase, 98.4 4E-06 1.4E-10 77.5 14.2 173 29-212 32-260 (351)
45 3oet_A Erythronate-4-phosphate 98.4 2.7E-06 9.2E-11 79.4 12.8 143 125-268 108-283 (381)
46 1v8b_A Adenosylhomocysteinase; 98.4 5.5E-07 1.9E-11 86.4 7.9 82 130-212 251-348 (479)
47 1l7d_A Nicotinamide nucleotide 98.4 8.9E-07 3E-11 82.5 8.5 78 133-211 169-297 (384)
48 2axq_A Saccharopine dehydrogen 98.4 9E-09 3.1E-13 98.7 -5.2 78 131-209 18-120 (467)
49 3ond_A Adenosylhomocysteinase; 98.3 1.3E-06 4.4E-11 83.9 9.2 82 128-210 257-354 (488)
50 2g76_A 3-PGDH, D-3-phosphoglyc 98.3 7E-06 2.4E-10 75.3 13.0 134 132-266 161-327 (335)
51 3k5p_A D-3-phosphoglycerate de 98.3 1.9E-05 6.4E-10 74.5 15.7 222 31-266 30-321 (416)
52 4hy3_A Phosphoglycerate oxidor 98.3 8.5E-06 2.9E-10 75.6 13.0 134 132-266 172-338 (365)
53 3gg9_A D-3-phosphoglycerate de 98.3 5.4E-06 1.8E-10 76.6 11.5 135 131-266 155-324 (352)
54 4g2n_A D-isomer specific 2-hyd 98.3 4.4E-06 1.5E-10 77.0 10.8 135 131-266 168-335 (345)
55 1x13_A NAD(P) transhydrogenase 98.3 6.5E-07 2.2E-11 84.1 5.0 77 134-211 170-295 (401)
56 4dgs_A Dehydrogenase; structur 98.2 9.4E-06 3.2E-10 74.7 12.1 134 132-266 167-330 (340)
57 2cuk_A Glycerate dehydrogenase 98.2 1E-05 3.6E-10 73.3 12.0 133 132-266 140-301 (311)
58 2o4c_A Erythronate-4-phosphate 98.2 9.2E-06 3.1E-10 75.8 11.4 143 124-267 104-279 (380)
59 2z2v_A Hypothetical protein PH 98.2 8.1E-07 2.8E-11 82.4 3.6 117 130-261 10-149 (365)
60 3hg7_A D-isomer specific 2-hyd 98.2 5.2E-06 1.8E-10 75.9 8.9 81 131-212 135-234 (324)
61 3pp8_A Glyoxylate/hydroxypyruv 98.1 3.7E-06 1.3E-10 76.6 7.1 81 131-212 134-233 (315)
62 3hdj_A Probable ornithine cycl 98.1 5.6E-06 1.9E-10 75.2 8.2 75 134-210 119-215 (313)
63 2pi1_A D-lactate dehydrogenase 98.1 1.1E-05 3.8E-10 73.9 10.1 135 131-266 136-318 (334)
64 3evt_A Phosphoglycerate dehydr 98.1 4E-06 1.4E-10 76.6 7.1 134 131-265 132-299 (324)
65 2vhw_A Alanine dehydrogenase; 98.1 6.1E-06 2.1E-10 76.7 8.2 78 133-211 165-271 (377)
66 3ce6_A Adenosylhomocysteinase; 98.1 5.6E-06 1.9E-10 79.8 8.0 81 130-211 268-364 (494)
67 3gvx_A Glycerate dehydrogenase 98.1 4.4E-06 1.5E-10 75.2 6.8 79 132-211 118-212 (290)
68 1wwk_A Phosphoglycerate dehydr 98.1 1.9E-05 6.5E-10 71.5 11.1 134 132-266 138-305 (307)
69 2dbq_A Glyoxylate reductase; D 98.1 1.8E-05 6.3E-10 72.3 11.1 134 132-266 146-312 (334)
70 1qp8_A Formate dehydrogenase; 98.1 8.1E-06 2.8E-10 73.8 8.5 79 133-212 121-214 (303)
71 2yq5_A D-isomer specific 2-hyd 98.1 4.7E-06 1.6E-10 76.8 6.7 134 132-266 144-322 (343)
72 1xdw_A NAD+-dependent (R)-2-hy 98.1 6.8E-06 2.3E-10 75.2 7.6 80 132-212 142-238 (331)
73 4e5n_A Thermostable phosphite 98.1 6.1E-06 2.1E-10 75.6 7.1 135 131-266 140-316 (330)
74 2i99_A MU-crystallin homolog; 98.0 1.7E-05 5.9E-10 71.7 9.9 78 133-211 132-230 (312)
75 1gdh_A D-glycerate dehydrogena 98.0 9.2E-06 3.2E-10 74.0 8.1 79 132-211 142-241 (320)
76 1omo_A Alanine dehydrogenase; 98.0 1.5E-05 5.2E-10 72.5 9.5 78 134-213 123-223 (322)
77 2w2k_A D-mandelate dehydrogena 98.0 3E-05 1E-09 71.4 11.5 134 131-265 158-327 (348)
78 2qrj_A Saccharopine dehydrogen 98.0 1.6E-06 5.4E-11 81.2 3.0 77 135-211 213-303 (394)
79 2nac_A NAD-dependent formate d 98.0 4.4E-05 1.5E-09 71.5 12.4 134 131-265 186-355 (393)
80 1dxy_A D-2-hydroxyisocaproate 98.0 8.8E-06 3E-10 74.5 7.4 133 132-265 141-318 (333)
81 2ekl_A D-3-phosphoglycerate de 98.0 9.2E-06 3.1E-10 73.8 7.4 134 131-265 137-306 (313)
82 1x7d_A Ornithine cyclodeaminas 98.0 1.5E-05 5.3E-10 73.4 8.6 90 118-210 113-228 (350)
83 1mx3_A CTBP1, C-terminal bindi 98.0 1.4E-05 4.9E-10 73.6 8.2 134 132-266 164-333 (347)
84 2j6i_A Formate dehydrogenase; 98.0 1.4E-05 4.8E-10 74.1 8.1 81 131-212 159-261 (364)
85 3nv9_A Malic enzyme; rossmann 98.0 5.2E-05 1.8E-09 72.0 11.7 172 22-212 113-330 (487)
86 1ygy_A PGDH, D-3-phosphoglycer 98.0 7.5E-05 2.6E-09 72.4 13.2 136 131-267 137-305 (529)
87 1j4a_A D-LDH, D-lactate dehydr 97.9 1.2E-05 4E-10 73.7 6.7 134 132-266 142-321 (333)
88 3ba1_A HPPR, hydroxyphenylpyru 97.9 1.3E-05 4.5E-10 73.5 6.9 133 132-265 160-322 (333)
89 3kb6_A D-lactate dehydrogenase 97.9 7.2E-05 2.4E-09 68.5 11.5 133 132-265 137-317 (334)
90 2gcg_A Glyoxylate reductase/hy 97.9 1.7E-05 5.8E-10 72.4 6.5 80 132-212 151-250 (330)
91 2eez_A Alanine dehydrogenase; 97.9 1.1E-05 3.8E-10 74.6 5.1 78 133-211 163-269 (369)
92 2d0i_A Dehydrogenase; structur 97.8 2.7E-05 9.2E-10 71.2 7.0 133 132-266 142-308 (333)
93 3abi_A Putative uncharacterize 97.8 1.6E-05 5.6E-10 73.1 4.8 115 133-262 11-150 (365)
94 1sc6_A PGDH, D-3-phosphoglycer 97.8 4E-05 1.4E-09 72.0 7.5 82 131-213 140-238 (404)
95 3dtt_A NADP oxidoreductase; st 97.7 1.3E-05 4.5E-10 69.7 3.1 79 128-208 11-124 (245)
96 4dll_A 2-hydroxy-3-oxopropiona 97.7 4.9E-05 1.7E-09 68.7 6.2 76 134-210 29-126 (320)
97 3pef_A 6-phosphogluconate dehy 97.7 3.9E-05 1.3E-09 68.0 5.0 73 137-210 2-97 (287)
98 3ic5_A Putative saccharopine d 97.6 2.6E-05 8.9E-10 58.8 3.2 73 135-208 4-100 (118)
99 2h78_A Hibadh, 3-hydroxyisobut 97.6 9.8E-05 3.3E-09 65.7 7.5 73 137-210 4-99 (302)
100 3dfz_A SIRC, precorrin-2 dehyd 97.6 8.8E-05 3E-09 64.3 6.1 123 121-259 14-162 (223)
101 3doj_A AT3G25530, dehydrogenas 97.6 5.3E-05 1.8E-09 68.1 4.9 75 135-210 20-117 (310)
102 3qha_A Putative oxidoreductase 97.6 0.0001 3.5E-09 65.8 6.5 72 137-210 16-107 (296)
103 1ff9_A Saccharopine reductase; 97.5 4.1E-05 1.4E-09 72.8 3.9 74 135-209 2-100 (450)
104 3pdu_A 3-hydroxyisobutyrate de 97.5 5.6E-05 1.9E-09 67.0 4.0 73 137-210 2-97 (287)
105 3obb_A Probable 3-hydroxyisobu 97.5 0.00022 7.5E-09 64.2 7.8 73 137-210 4-99 (300)
106 3g0o_A 3-hydroxyisobutyrate de 97.5 9E-05 3.1E-09 66.3 5.0 74 136-210 7-104 (303)
107 3l6d_A Putative oxidoreductase 97.5 8.7E-05 3E-09 66.6 4.6 78 133-211 6-104 (306)
108 3e8x_A Putative NAD-dependent 97.5 0.00021 7.3E-09 60.7 6.8 58 132-189 17-94 (236)
109 1np3_A Ketol-acid reductoisome 97.4 8.8E-05 3E-09 67.7 4.5 74 134-208 14-107 (338)
110 4e21_A 6-phosphogluconate dehy 97.4 0.00021 7.3E-09 65.9 6.9 77 134-211 20-118 (358)
111 1leh_A Leucine dehydrogenase; 97.4 0.00025 8.4E-09 65.8 6.7 93 117-211 148-263 (364)
112 4gbj_A 6-phosphogluconate dehy 97.4 0.00018 6.2E-09 64.6 5.6 73 137-210 6-99 (297)
113 2pv7_A T-protein [includes: ch 97.4 0.00016 5.4E-09 64.7 5.1 73 136-209 21-100 (298)
114 4ezb_A Uncharacterized conserv 97.4 0.00018 6.3E-09 65.0 5.5 72 137-209 25-122 (317)
115 3ggo_A Prephenate dehydrogenas 97.4 0.00019 6.6E-09 64.9 5.7 75 135-210 32-130 (314)
116 2raf_A Putative dinucleotide-b 97.3 0.0003 1E-08 59.6 6.4 74 130-209 13-91 (209)
117 3qsg_A NAD-binding phosphogluc 97.3 0.0003 1E-08 63.3 6.3 74 136-210 24-119 (312)
118 2cvz_A Dehydrogenase, 3-hydrox 97.3 0.00017 5.9E-09 63.3 4.5 71 137-209 2-91 (289)
119 2vns_A Metalloreductase steap3 97.3 0.00024 8.1E-09 60.5 4.9 73 136-210 28-117 (215)
120 2uyy_A N-PAC protein; long-cha 97.2 0.00023 7.7E-09 63.7 4.7 71 137-208 31-124 (316)
121 2gf2_A Hibadh, 3-hydroxyisobut 97.2 0.00034 1.2E-08 61.8 5.3 70 138-208 2-94 (296)
122 3cky_A 2-hydroxymethyl glutara 97.2 0.00033 1.1E-08 62.0 5.1 72 137-209 5-99 (301)
123 1vpd_A Tartronate semialdehyde 97.2 0.00033 1.1E-08 62.0 5.0 72 137-209 6-100 (299)
124 2bka_A CC3, TAT-interacting pr 97.1 0.00061 2.1E-08 57.8 6.0 56 134-189 16-94 (242)
125 3d1l_A Putative NADP oxidoredu 97.1 0.00033 1.1E-08 61.0 4.4 75 134-209 8-103 (266)
126 2yjz_A Metalloreductase steap4 96.2 7.7E-05 2.6E-09 63.3 0.0 76 134-210 17-107 (201)
127 3d6n_B Aspartate carbamoyltran 97.1 0.0054 1.9E-07 55.0 12.1 144 27-188 50-213 (291)
128 1u7z_A Coenzyme A biosynthesis 97.1 0.0017 5.6E-08 56.3 8.4 79 133-211 5-128 (226)
129 1yb4_A Tartronic semialdehyde 97.1 0.00071 2.4E-08 59.6 5.9 71 137-209 4-97 (295)
130 1hdo_A Biliverdin IX beta redu 97.1 0.00079 2.7E-08 55.2 5.8 54 136-189 3-77 (206)
131 2g5c_A Prephenate dehydrogenas 97.0 0.00053 1.8E-08 60.2 4.8 72 137-209 2-97 (281)
132 3ruf_A WBGU; rossmann fold, UD 97.0 0.0015 5.3E-08 58.4 7.9 69 116-189 10-110 (351)
133 1yqd_A Sinapyl alcohol dehydro 97.0 0.0011 3.9E-08 60.6 7.2 94 116-210 168-284 (366)
134 4h15_A Short chain alcohol deh 97.0 0.00087 3E-08 59.0 6.1 57 132-188 7-87 (261)
135 3ew7_A LMO0794 protein; Q8Y8U8 97.0 0.0009 3.1E-08 55.6 5.8 53 138-190 2-72 (221)
136 2hmt_A YUAA protein; RCK, KTN, 97.0 0.00045 1.6E-08 53.6 3.6 56 134-190 4-81 (144)
137 2zyd_A 6-phosphogluconate dehy 97.0 0.001 3.5E-08 63.6 6.7 78 132-210 11-115 (480)
138 2f1k_A Prephenate dehydrogenas 97.0 0.0008 2.7E-08 58.9 5.4 69 138-208 2-91 (279)
139 4id9_A Short-chain dehydrogena 96.9 0.0012 4E-08 59.1 6.3 58 132-189 15-87 (347)
140 3dhn_A NAD-dependent epimerase 96.9 0.00089 3E-08 56.2 5.1 53 137-189 5-77 (227)
141 1f0y_A HCDH, L-3-hydroxyacyl-C 96.9 0.0014 4.9E-08 58.3 6.6 70 137-207 16-135 (302)
142 3two_A Mannitol dehydrogenase; 96.9 0.0018 6.3E-08 58.6 7.4 94 116-211 158-268 (348)
143 1c1d_A L-phenylalanine dehydro 96.9 0.0023 7.8E-08 59.1 8.0 94 116-211 150-264 (355)
144 3csu_A Protein (aspartate carb 96.9 0.012 4.2E-07 53.2 12.6 149 22-187 52-229 (310)
145 2g1u_A Hypothetical protein TM 96.9 0.0013 4.5E-08 52.6 5.5 37 132-169 15-51 (155)
146 3gt0_A Pyrroline-5-carboxylate 96.9 0.0011 3.9E-08 57.2 5.5 69 137-206 3-95 (247)
147 4gkb_A 3-oxoacyl-[acyl-carrier 96.9 0.0025 8.4E-08 56.1 7.7 40 131-170 2-41 (258)
148 3r6d_A NAD-dependent epimerase 96.9 0.0011 3.7E-08 55.7 5.1 54 137-190 6-84 (221)
149 2izz_A Pyrroline-5-carboxylate 96.8 0.001 3.5E-08 60.0 5.2 72 136-208 22-118 (322)
150 3gms_A Putative NADPH:quinone 96.8 0.00054 1.8E-08 62.0 3.3 95 117-211 126-246 (340)
151 4b79_A PA4098, probable short- 96.8 0.0023 7.9E-08 55.9 7.2 56 134-189 9-88 (242)
152 4e12_A Diketoreductase; oxidor 96.8 0.0018 6.1E-08 57.3 6.6 71 137-208 5-121 (283)
153 2cf5_A Atccad5, CAD, cinnamyl 96.8 0.0022 7.5E-08 58.4 7.3 94 116-210 161-277 (357)
154 4fs3_A Enoyl-[acyl-carrier-pro 96.8 0.0013 4.6E-08 57.2 5.5 37 132-169 2-41 (256)
155 3r7f_A Aspartate carbamoyltran 96.8 0.0053 1.8E-07 55.4 9.6 143 28-187 53-211 (304)
156 3c24_A Putative oxidoreductase 96.8 0.00074 2.5E-08 59.6 3.9 72 137-209 12-102 (286)
157 3dqp_A Oxidoreductase YLBE; al 96.8 0.0011 3.8E-08 55.5 4.8 52 138-189 2-73 (219)
158 1gq2_A Malic enzyme; oxidoredu 96.8 0.0016 5.5E-08 62.9 6.4 166 28-212 160-398 (555)
159 2pzm_A Putative nucleotide sug 96.8 0.0021 7.1E-08 57.4 6.8 58 132-189 16-98 (330)
160 3tpc_A Short chain alcohol deh 96.8 0.0024 8.2E-08 55.1 7.0 38 133-170 4-41 (257)
161 1o5i_A 3-oxoacyl-(acyl carrier 96.8 0.0026 8.8E-08 54.9 7.1 60 130-189 13-91 (249)
162 2o23_A HADH2 protein; HSD17B10 96.8 0.0026 8.8E-08 54.7 7.1 39 132-170 8-46 (265)
163 1o0s_A NAD-ME, NAD-dependent m 96.8 0.0018 6E-08 63.1 6.5 92 119-212 303-436 (605)
164 2dpo_A L-gulonate 3-dehydrogen 96.8 0.0011 3.7E-08 60.2 4.7 74 136-210 6-125 (319)
165 3llv_A Exopolyphosphatase-rela 96.8 0.0013 4.4E-08 51.5 4.6 54 135-189 5-80 (141)
166 4g81_D Putative hexonate dehyd 96.8 0.001 3.5E-08 58.5 4.4 38 132-169 5-42 (255)
167 1jw9_B Molybdopterin biosynthe 96.8 0.00074 2.5E-08 59.0 3.4 35 134-169 29-64 (249)
168 1xq6_A Unknown protein; struct 96.8 0.0017 5.8E-08 54.9 5.6 56 134-189 2-79 (253)
169 2ef0_A Ornithine carbamoyltran 96.8 0.0093 3.2E-07 53.7 10.7 147 22-187 56-221 (301)
170 3rft_A Uronate dehydrogenase; 96.8 0.00091 3.1E-08 58.2 3.9 55 135-189 2-74 (267)
171 2ahr_A Putative pyrroline carb 96.8 0.0018 6.2E-08 56.0 5.8 69 137-208 4-90 (259)
172 4fn4_A Short chain dehydrogena 96.7 0.0015 5.1E-08 57.4 5.3 38 132-169 3-40 (254)
173 1duv_G Octase-1, ornithine tra 96.7 0.0083 2.8E-07 54.8 10.4 142 28-187 61-232 (333)
174 3c85_A Putative glutathione-re 96.7 0.00099 3.4E-08 54.6 3.9 58 132-190 35-116 (183)
175 1pvv_A Otcase, ornithine carba 96.7 0.014 4.9E-07 52.8 11.9 141 28-187 63-231 (315)
176 3qvo_A NMRA family protein; st 96.7 0.0012 4.1E-08 56.2 4.6 57 135-191 22-100 (236)
177 1txg_A Glycerol-3-phosphate de 96.7 0.0018 6.2E-08 57.9 5.9 68 138-208 2-104 (335)
178 4eye_A Probable oxidoreductase 96.7 0.0012 4.1E-08 59.9 4.6 94 117-210 141-259 (342)
179 3sxp_A ADP-L-glycero-D-mannohe 96.7 0.0028 9.7E-08 57.2 7.1 36 133-168 7-44 (362)
180 3tzq_B Short-chain type dehydr 96.7 0.0031 1.1E-07 55.0 7.1 39 132-170 7-45 (271)
181 3pid_A UDP-glucose 6-dehydroge 96.7 0.0019 6.5E-08 61.1 6.0 80 130-212 30-157 (432)
182 1pg5_A Aspartate carbamoyltran 96.7 0.011 3.6E-07 53.3 10.6 149 22-188 49-222 (299)
183 3vtz_A Glucose 1-dehydrogenase 96.7 0.0021 7E-08 56.3 5.8 60 130-189 8-91 (269)
184 3tpf_A Otcase, ornithine carba 96.7 0.01 3.6E-07 53.5 10.6 141 28-187 53-222 (307)
185 1iz0_A Quinone oxidoreductase; 96.7 0.0015 5.1E-08 58.0 4.9 88 121-210 112-220 (302)
186 3afn_B Carbonyl reductase; alp 96.7 0.0024 8.4E-08 54.4 6.1 37 133-169 4-40 (258)
187 3h2s_A Putative NADH-flavin re 96.7 0.0018 6.1E-08 54.1 5.1 52 138-189 2-72 (224)
188 3m2p_A UDP-N-acetylglucosamine 96.7 0.0018 6.2E-08 57.1 5.4 54 136-189 2-72 (311)
189 3ojo_A CAP5O; rossmann fold, c 96.7 0.003 1E-07 59.8 7.2 77 134-211 9-132 (431)
190 3tqh_A Quinone oxidoreductase; 96.7 0.0016 5.5E-08 58.3 5.1 92 117-209 135-246 (321)
191 4gwg_A 6-phosphogluconate dehy 96.7 0.0021 7.2E-08 61.7 6.1 75 136-211 4-106 (484)
192 3jyn_A Quinone oxidoreductase; 96.6 0.0015 5.2E-08 58.6 4.8 91 121-211 126-242 (325)
193 4a7p_A UDP-glucose dehydrogena 96.6 0.0026 8.9E-08 60.4 6.5 73 137-210 9-131 (446)
194 1uuf_A YAHK, zinc-type alcohol 96.6 0.0038 1.3E-07 57.3 7.5 92 117-210 177-290 (369)
195 1lss_A TRK system potassium up 96.6 0.0024 8.1E-08 49.2 5.2 54 136-190 4-80 (140)
196 3gg2_A Sugar dehydrogenase, UD 96.6 0.0023 8E-08 60.7 6.1 72 137-209 3-123 (450)
197 2i6u_A Otcase, ornithine carba 96.6 0.022 7.5E-07 51.4 12.2 141 28-187 56-225 (307)
198 4ekn_B Aspartate carbamoyltran 96.6 0.023 7.9E-07 51.3 12.3 148 22-187 51-226 (306)
199 4e6p_A Probable sorbitol dehyd 96.6 0.002 6.8E-08 55.8 5.1 37 133-169 5-41 (259)
200 2gas_A Isoflavone reductase; N 96.6 0.0019 6.7E-08 56.5 5.0 54 136-189 2-86 (307)
201 3uxy_A Short-chain dehydrogena 96.6 0.0018 6.3E-08 56.6 4.8 58 132-189 24-104 (266)
202 1dxh_A Ornithine carbamoyltran 96.6 0.017 5.8E-07 52.8 11.4 147 22-187 56-232 (335)
203 2p4q_A 6-phosphogluconate dehy 96.6 0.0026 8.7E-08 61.2 6.1 73 136-209 10-110 (497)
204 4a8t_A Putrescine carbamoyltra 96.6 0.044 1.5E-06 50.1 14.0 140 28-187 80-250 (339)
205 4b7c_A Probable oxidoreductase 96.6 0.0015 5.2E-08 58.7 4.3 94 117-210 131-250 (336)
206 3g79_A NDP-N-acetyl-D-galactos 96.6 0.0088 3E-07 57.2 9.8 75 137-212 19-151 (478)
207 4huj_A Uncharacterized protein 96.6 0.0024 8.1E-08 54.4 5.2 70 136-209 23-114 (220)
208 1z82_A Glycerol-3-phosphate de 96.6 0.0038 1.3E-07 56.3 6.9 70 136-208 14-111 (335)
209 3gd5_A Otcase, ornithine carba 96.6 0.01 3.5E-07 53.9 9.6 140 28-187 65-233 (323)
210 1vlv_A Otcase, ornithine carba 96.6 0.014 4.8E-07 53.1 10.5 146 22-186 69-243 (325)
211 2vn8_A Reticulon-4-interacting 96.6 0.0061 2.1E-07 55.8 8.2 76 134-209 182-281 (375)
212 3rwb_A TPLDH, pyridoxal 4-dehy 96.6 0.0026 8.8E-08 54.8 5.4 37 133-169 3-39 (247)
213 1piw_A Hypothetical zinc-type 96.6 0.0071 2.4E-07 55.0 8.6 93 116-210 161-278 (360)
214 3qwb_A Probable quinone oxidor 96.5 0.0012 4.2E-08 59.4 3.4 78 134-211 147-250 (334)
215 2dtx_A Glucose 1-dehydrogenase 96.5 0.0032 1.1E-07 54.8 6.0 57 133-189 5-84 (264)
216 2q3e_A UDP-glucose 6-dehydroge 96.5 0.0037 1.3E-07 59.4 6.7 74 137-211 6-134 (467)
217 3oh8_A Nucleoside-diphosphate 96.5 0.0037 1.3E-07 59.8 6.8 54 136-189 147-211 (516)
218 3lk7_A UDP-N-acetylmuramoylala 96.5 0.0044 1.5E-07 58.5 7.3 37 133-170 6-42 (451)
219 2iz1_A 6-phosphogluconate dehy 96.5 0.0027 9.1E-08 60.5 5.7 72 137-209 6-104 (474)
220 4f2g_A Otcase 1, ornithine car 96.5 0.013 4.4E-07 53.0 9.9 140 28-187 62-224 (309)
221 2gk4_A Conserved hypothetical 96.5 0.0039 1.3E-07 54.2 6.2 57 135-191 2-96 (232)
222 2q1s_A Putative nucleotide sug 96.5 0.0048 1.6E-07 56.1 7.2 57 133-189 29-109 (377)
223 3gem_A Short chain dehydrogena 96.5 0.0023 7.8E-08 55.7 4.8 39 132-170 23-61 (260)
224 1pjq_A CYSG, siroheme synthase 96.5 0.0034 1.2E-07 59.6 6.3 58 132-190 8-83 (457)
225 3b1f_A Putative prephenate deh 96.5 0.0016 5.5E-08 57.3 3.8 71 137-208 7-101 (290)
226 3i6i_A Putative leucoanthocyan 96.5 0.0022 7.4E-08 57.7 4.7 56 135-190 9-94 (346)
227 4ina_A Saccharopine dehydrogen 96.5 0.0016 5.3E-08 60.9 3.8 71 137-208 2-107 (405)
228 3n74_A 3-ketoacyl-(acyl-carrie 96.5 0.0031 1.1E-07 54.3 5.5 38 132-169 5-42 (261)
229 3c1o_A Eugenol synthase; pheny 96.5 0.0032 1.1E-07 55.7 5.7 54 136-189 4-87 (321)
230 1rjw_A ADH-HT, alcohol dehydro 96.5 0.004 1.4E-07 56.2 6.4 93 116-210 146-263 (339)
231 1nff_A Putative oxidoreductase 96.5 0.0026 9E-08 55.1 5.0 37 133-169 4-40 (260)
232 1ml4_A Aspartate transcarbamoy 96.5 0.016 5.5E-07 52.3 10.3 164 28-208 61-268 (308)
233 3qiv_A Short-chain dehydrogena 96.5 0.0027 9.3E-08 54.4 5.0 38 132-169 5-42 (253)
234 2ew2_A 2-dehydropantoate 2-red 96.5 0.0023 7.8E-08 56.4 4.7 71 137-208 4-108 (316)
235 1kyq_A Met8P, siroheme biosynt 96.5 0.0028 9.5E-08 56.4 5.2 36 132-168 9-44 (274)
236 4a8p_A Putrescine carbamoyltra 96.5 0.031 1E-06 51.5 12.3 140 28-187 58-228 (355)
237 3uog_A Alcohol dehydrogenase; 96.5 0.0035 1.2E-07 57.2 6.0 95 116-211 170-290 (363)
238 2a4k_A 3-oxoacyl-[acyl carrier 96.5 0.0027 9.2E-08 55.3 5.0 37 133-169 3-39 (263)
239 3d7l_A LIN1944 protein; APC893 96.5 0.0019 6.6E-08 53.2 3.9 53 136-189 2-68 (202)
240 2hcy_A Alcohol dehydrogenase 1 96.5 0.0045 1.5E-07 56.0 6.7 93 117-210 152-271 (347)
241 3sds_A Ornithine carbamoyltran 96.5 0.034 1.1E-06 51.2 12.5 142 28-187 83-266 (353)
242 1zej_A HBD-9, 3-hydroxyacyl-CO 96.5 0.0032 1.1E-07 56.5 5.5 52 135-189 11-83 (293)
243 2q1w_A Putative nucleotide sug 96.4 0.0041 1.4E-07 55.5 6.3 57 133-189 18-99 (333)
244 2nm0_A Probable 3-oxacyl-(acyl 96.4 0.0043 1.5E-07 53.7 6.2 39 132-170 17-55 (253)
245 1sb8_A WBPP; epimerase, 4-epim 96.4 0.0038 1.3E-07 56.0 6.0 57 133-189 24-112 (352)
246 4iin_A 3-ketoacyl-acyl carrier 96.4 0.0039 1.3E-07 54.3 5.9 40 130-169 23-62 (271)
247 1ae1_A Tropinone reductase-I; 96.4 0.0035 1.2E-07 54.7 5.6 38 132-169 17-54 (273)
248 3ijr_A Oxidoreductase, short c 96.4 0.0044 1.5E-07 54.7 6.2 38 132-169 43-80 (291)
249 1yqg_A Pyrroline-5-carboxylate 96.4 0.0033 1.1E-07 54.3 5.2 49 138-188 2-66 (263)
250 4ep1_A Otcase, ornithine carba 96.4 0.011 3.7E-07 54.2 8.8 140 28-187 87-255 (340)
251 1pj3_A NAD-dependent malic enz 96.4 0.0033 1.1E-07 60.9 5.6 166 28-212 162-403 (564)
252 3vps_A TUNA, NAD-dependent epi 96.4 0.0032 1.1E-07 55.2 5.1 56 134-189 5-79 (321)
253 1pqw_A Polyketide synthase; ro 96.4 0.0012 4.1E-08 54.7 2.3 78 134-211 37-140 (198)
254 1pzg_A LDH, lactate dehydrogen 96.4 0.0044 1.5E-07 56.3 6.2 55 136-191 9-90 (331)
255 3op4_A 3-oxoacyl-[acyl-carrier 96.4 0.0031 1.1E-07 54.3 4.9 38 132-169 5-42 (248)
256 4fgs_A Probable dehydrogenase 96.4 0.0047 1.6E-07 54.8 6.2 38 132-169 25-62 (273)
257 3h5n_A MCCB protein; ubiquitin 96.4 0.0049 1.7E-07 56.6 6.5 34 134-168 116-150 (353)
258 1e6u_A GDP-fucose synthetase; 96.4 0.0026 8.8E-08 56.1 4.5 55 135-189 2-65 (321)
259 3un1_A Probable oxidoreductase 96.4 0.0039 1.3E-07 54.2 5.6 36 134-169 26-61 (260)
260 3imf_A Short chain dehydrogena 96.4 0.003 1E-07 54.6 4.8 37 133-169 3-39 (257)
261 1ooe_A Dihydropteridine reduct 96.4 0.004 1.4E-07 52.9 5.5 36 135-170 2-37 (236)
262 3f9i_A 3-oxoacyl-[acyl-carrier 96.4 0.0033 1.1E-07 53.8 5.0 39 131-169 9-47 (249)
263 2c5a_A GDP-mannose-3', 5'-epim 96.4 0.007 2.4E-07 55.1 7.5 56 134-189 27-103 (379)
264 2b4q_A Rhamnolipids biosynthes 96.4 0.0032 1.1E-07 55.3 4.9 37 133-169 26-62 (276)
265 1ks9_A KPA reductase;, 2-dehyd 96.4 0.0043 1.5E-07 54.0 5.8 70 138-208 2-97 (291)
266 4dup_A Quinone oxidoreductase; 96.4 0.002 6.8E-08 58.6 3.7 77 134-210 166-267 (353)
267 1vl0_A DTDP-4-dehydrorhamnose 96.4 0.0025 8.7E-08 55.5 4.3 55 135-189 11-73 (292)
268 4dqx_A Probable oxidoreductase 96.4 0.0038 1.3E-07 54.8 5.5 39 131-169 22-60 (277)
269 3sc4_A Short chain dehydrogena 96.4 0.0055 1.9E-07 53.9 6.4 39 132-170 5-43 (285)
270 4egf_A L-xylulose reductase; s 96.4 0.0043 1.5E-07 54.0 5.6 37 133-169 17-53 (266)
271 4b4o_A Epimerase family protei 96.4 0.0043 1.5E-07 54.4 5.7 52 138-189 2-61 (298)
272 1v3u_A Leukotriene B4 12- hydr 96.4 0.0025 8.7E-08 57.2 4.3 88 123-210 133-246 (333)
273 1bg6_A N-(1-D-carboxylethyl)-L 96.4 0.0042 1.4E-07 56.0 5.8 70 137-207 5-108 (359)
274 3zv4_A CIS-2,3-dihydrobiphenyl 96.4 0.0037 1.3E-07 54.9 5.3 37 133-169 2-38 (281)
275 1id1_A Putative potassium chan 96.4 0.0052 1.8E-07 48.9 5.7 54 135-189 2-81 (153)
276 3grp_A 3-oxoacyl-(acyl carrier 96.4 0.0034 1.1E-07 54.8 5.0 38 132-169 23-60 (266)
277 2p4h_X Vestitone reductase; NA 96.3 0.0056 1.9E-07 53.8 6.5 33 136-168 1-33 (322)
278 3v2g_A 3-oxoacyl-[acyl-carrier 96.3 0.0055 1.9E-07 53.6 6.3 39 131-169 26-64 (271)
279 3gvc_A Oxidoreductase, probabl 96.3 0.0033 1.1E-07 55.3 4.8 38 132-169 25-62 (277)
280 1y1p_A ARII, aldehyde reductas 96.3 0.0071 2.4E-07 53.5 7.1 37 133-169 8-44 (342)
281 2w37_A Ornithine carbamoyltran 96.3 0.043 1.5E-06 50.6 12.3 147 22-187 78-253 (359)
282 3uce_A Dehydrogenase; rossmann 96.3 0.0019 6.5E-08 54.6 3.1 57 133-189 3-69 (223)
283 2r6j_A Eugenol synthase 1; phe 96.3 0.0052 1.8E-07 54.3 6.1 53 137-189 12-89 (318)
284 3gaf_A 7-alpha-hydroxysteroid 96.3 0.0031 1.1E-07 54.6 4.5 39 131-169 7-45 (256)
285 1wly_A CAAR, 2-haloacrylate re 96.3 0.0037 1.3E-07 56.2 5.2 77 134-210 144-246 (333)
286 2ydy_A Methionine adenosyltran 96.3 0.0035 1.2E-07 55.2 4.9 54 136-189 2-70 (315)
287 1oth_A Protein (ornithine tran 96.3 0.014 4.6E-07 53.1 8.9 163 28-209 63-272 (321)
288 2c0c_A Zinc binding alcohol de 96.3 0.0038 1.3E-07 57.0 5.3 90 121-210 149-263 (362)
289 2hjr_A Malate dehydrogenase; m 96.3 0.007 2.4E-07 54.9 7.0 54 136-191 14-94 (328)
290 2z1m_A GDP-D-mannose dehydrata 96.3 0.0043 1.5E-07 54.9 5.5 36 135-170 2-37 (345)
291 3v2h_A D-beta-hydroxybutyrate 96.3 0.0063 2.2E-07 53.5 6.5 37 132-168 21-57 (281)
292 1x0v_A GPD-C, GPDH-C, glycerol 96.3 0.0043 1.5E-07 56.1 5.5 72 136-208 8-124 (354)
293 3tl3_A Short-chain type dehydr 96.3 0.0033 1.1E-07 54.2 4.5 37 133-169 6-42 (257)
294 2gn4_A FLAA1 protein, UDP-GLCN 96.3 0.0036 1.2E-07 56.6 4.9 58 133-190 18-102 (344)
295 3l77_A Short-chain alcohol deh 96.3 0.0094 3.2E-07 50.4 7.3 35 135-169 1-35 (235)
296 1qyc_A Phenylcoumaran benzylic 96.3 0.0041 1.4E-07 54.4 5.2 54 136-189 4-87 (308)
297 3rkr_A Short chain oxidoreduct 96.3 0.0039 1.3E-07 54.0 5.0 38 132-169 25-62 (262)
298 4dmm_A 3-oxoacyl-[acyl-carrier 96.3 0.005 1.7E-07 53.8 5.6 38 132-169 24-61 (269)
299 4h31_A Otcase, ornithine carba 96.3 0.03 1E-06 51.6 11.0 142 28-187 87-258 (358)
300 3orf_A Dihydropteridine reduct 96.3 0.0047 1.6E-07 53.2 5.3 37 134-170 20-56 (251)
301 3ius_A Uncharacterized conserv 96.3 0.0062 2.1E-07 52.8 6.1 53 136-189 5-73 (286)
302 3tjr_A Short chain dehydrogena 96.3 0.005 1.7E-07 54.6 5.6 38 132-169 27-64 (301)
303 3fi9_A Malate dehydrogenase; s 96.2 0.0051 1.7E-07 56.4 5.7 57 134-190 6-87 (343)
304 3ucx_A Short chain dehydrogena 96.2 0.0059 2E-07 53.0 5.9 38 132-169 7-44 (264)
305 1jvb_A NAD(H)-dependent alcoho 96.2 0.009 3.1E-07 54.0 7.3 94 116-210 152-273 (347)
306 4ibo_A Gluconate dehydrogenase 96.2 0.0035 1.2E-07 54.9 4.3 38 132-169 22-59 (271)
307 1mv8_A GMD, GDP-mannose 6-dehy 96.2 0.0066 2.3E-07 57.0 6.4 73 138-211 2-126 (436)
308 3vtf_A UDP-glucose 6-dehydroge 96.2 0.019 6.6E-07 54.4 9.6 84 123-208 320-427 (444)
309 3tri_A Pyrroline-5-carboxylate 96.2 0.006 2.1E-07 53.9 5.7 52 136-188 3-72 (280)
310 3ko8_A NAD-dependent epimerase 96.2 0.0096 3.3E-07 52.2 7.0 53 137-190 1-73 (312)
311 1yj8_A Glycerol-3-phosphate de 96.2 0.0036 1.2E-07 57.4 4.4 71 137-208 22-141 (375)
312 4da9_A Short-chain dehydrogena 96.2 0.0088 3E-07 52.5 6.7 37 132-168 25-61 (280)
313 1uay_A Type II 3-hydroxyacyl-C 96.2 0.0044 1.5E-07 52.2 4.6 54 136-189 2-76 (242)
314 1t2d_A LDH-P, L-lactate dehydr 96.2 0.0084 2.9E-07 54.3 6.8 52 137-190 5-83 (322)
315 3m1a_A Putative dehydrogenase; 96.2 0.0053 1.8E-07 53.5 5.2 37 134-170 3-39 (281)
316 3fwz_A Inner membrane protein 96.2 0.0043 1.5E-07 48.8 4.2 53 137-190 8-82 (140)
317 3k6j_A Protein F01G10.3, confi 96.2 0.0057 2E-07 58.2 5.8 71 137-209 55-167 (460)
318 3s2e_A Zinc-containing alcohol 96.2 0.0066 2.3E-07 54.6 6.0 93 116-210 148-265 (340)
319 2x6t_A ADP-L-glycero-D-manno-h 96.2 0.0071 2.4E-07 54.3 6.1 57 133-189 43-125 (357)
320 3is3_A 17BETA-hydroxysteroid d 96.1 0.0058 2E-07 53.2 5.4 38 132-169 14-51 (270)
321 3gvi_A Malate dehydrogenase; N 96.1 0.0099 3.4E-07 54.0 7.0 55 134-190 5-86 (324)
322 3v8b_A Putative dehydrogenase, 96.1 0.0057 2E-07 53.9 5.3 38 132-169 24-61 (283)
323 3gpi_A NAD-dependent epimerase 96.1 0.0043 1.5E-07 54.0 4.5 53 135-188 2-72 (286)
324 2dkn_A 3-alpha-hydroxysteroid 96.1 0.0096 3.3E-07 50.4 6.6 53 137-189 2-72 (255)
325 3grk_A Enoyl-(acyl-carrier-pro 96.1 0.007 2.4E-07 53.5 5.9 38 132-169 27-66 (293)
326 3st7_A Capsular polysaccharide 96.1 0.0023 7.7E-08 58.1 2.7 53 137-189 1-56 (369)
327 3ftp_A 3-oxoacyl-[acyl-carrier 96.1 0.005 1.7E-07 53.9 4.8 38 132-169 24-61 (270)
328 3fr7_A Putative ketol-acid red 96.1 0.0049 1.7E-07 59.2 5.0 74 134-208 51-155 (525)
329 2pgd_A 6-phosphogluconate dehy 96.1 0.0032 1.1E-07 60.1 3.8 72 137-209 3-102 (482)
330 3p19_A BFPVVD8, putative blue 96.1 0.0042 1.4E-07 54.2 4.3 38 132-169 12-49 (266)
331 3sc6_A DTDP-4-dehydrorhamnose 96.1 0.0034 1.2E-07 54.5 3.6 52 138-189 7-66 (287)
332 1sny_A Sniffer CG10964-PA; alp 96.1 0.0078 2.7E-07 51.7 5.9 39 132-170 17-58 (267)
333 3tox_A Short chain dehydrogena 96.1 0.0042 1.4E-07 54.7 4.2 37 133-169 5-41 (280)
334 3tfo_A Putative 3-oxoacyl-(acy 96.1 0.0053 1.8E-07 53.7 4.8 36 134-169 2-37 (264)
335 3hwr_A 2-dehydropantoate 2-red 96.1 0.008 2.8E-07 54.0 6.1 75 131-208 14-120 (318)
336 1fjh_A 3alpha-hydroxysteroid d 96.1 0.0095 3.3E-07 50.9 6.4 53 137-189 2-72 (257)
337 2ewd_A Lactate dehydrogenase,; 96.1 0.0085 2.9E-07 53.8 6.3 54 136-191 4-84 (317)
338 3h7a_A Short chain dehydrogena 96.1 0.0051 1.7E-07 53.1 4.6 39 132-170 3-41 (252)
339 1qyd_A Pinoresinol-lariciresin 96.1 0.0071 2.4E-07 53.0 5.6 54 136-189 4-86 (313)
340 3gqv_A Enoyl reductase; medium 96.1 0.0088 3E-07 54.7 6.4 77 134-210 163-265 (371)
341 3k31_A Enoyl-(acyl-carrier-pro 96.0 0.0086 2.9E-07 53.0 6.0 38 132-169 26-65 (296)
342 1yb5_A Quinone oxidoreductase; 96.0 0.0029 1E-07 57.5 3.0 87 123-209 158-270 (351)
343 3enk_A UDP-glucose 4-epimerase 96.0 0.011 3.8E-07 52.4 6.7 35 135-169 4-38 (341)
344 2a35_A Hypothetical protein PA 96.0 0.0064 2.2E-07 50.2 4.9 55 135-189 4-75 (215)
345 2ehd_A Oxidoreductase, oxidore 96.0 0.0051 1.7E-07 52.0 4.3 35 135-169 4-38 (234)
346 2hrz_A AGR_C_4963P, nucleoside 96.0 0.0078 2.7E-07 53.5 5.7 58 132-189 10-96 (342)
347 2rcy_A Pyrroline carboxylate r 96.0 0.0051 1.7E-07 53.1 4.3 53 136-189 4-68 (262)
348 4dyv_A Short-chain dehydrogena 96.0 0.0054 1.8E-07 53.8 4.5 37 133-169 25-61 (272)
349 3rd5_A Mypaa.01249.C; ssgcid, 96.0 0.0048 1.6E-07 54.3 4.2 38 132-169 12-49 (291)
350 2h6e_A ADH-4, D-arabinose 1-de 96.0 0.0028 9.5E-08 57.3 2.7 91 117-210 149-271 (344)
351 2ekp_A 2-deoxy-D-gluconate 3-d 96.0 0.013 4.4E-07 49.9 6.8 34 136-169 2-35 (239)
352 3e03_A Short chain dehydrogena 96.0 0.0085 2.9E-07 52.3 5.8 39 132-170 2-40 (274)
353 2wm3_A NMRA-like family domain 96.0 0.011 3.8E-07 51.6 6.6 53 136-188 5-81 (299)
354 3r1i_A Short-chain type dehydr 96.0 0.0069 2.4E-07 53.1 5.2 38 132-169 28-65 (276)
355 1hdc_A 3-alpha, 20 beta-hydrox 96.0 0.0043 1.5E-07 53.5 3.7 37 133-169 2-38 (254)
356 3vku_A L-LDH, L-lactate dehydr 96.0 0.0083 2.9E-07 54.6 5.8 58 132-190 5-87 (326)
357 2c29_D Dihydroflavonol 4-reduc 96.0 0.0098 3.3E-07 52.9 6.2 36 134-169 3-38 (337)
358 3dii_A Short-chain dehydrogena 96.0 0.0076 2.6E-07 51.7 5.2 34 136-169 2-35 (247)
359 1zsy_A Mitochondrial 2-enoyl t 96.0 0.012 4.3E-07 53.3 6.9 94 116-209 148-271 (357)
360 1qor_A Quinone oxidoreductase; 96.0 0.0044 1.5E-07 55.4 3.9 76 134-210 139-241 (327)
361 2d8a_A PH0655, probable L-thre 96.0 0.0037 1.3E-07 56.5 3.3 84 124-210 158-269 (348)
362 2j8z_A Quinone oxidoreductase; 96.0 0.0045 1.5E-07 56.2 3.9 77 134-210 161-263 (354)
363 1rkx_A CDP-glucose-4,6-dehydra 95.9 0.0094 3.2E-07 53.4 5.9 36 134-169 7-42 (357)
364 3sju_A Keto reductase; short-c 95.9 0.0077 2.6E-07 52.8 5.1 36 134-169 22-57 (279)
365 1cyd_A Carbonyl reductase; sho 95.9 0.0089 3.1E-07 50.6 5.4 38 132-169 3-40 (244)
366 3goh_A Alcohol dehydrogenase, 95.9 0.011 3.8E-07 52.6 6.2 88 120-210 128-231 (315)
367 2b69_A UDP-glucuronate decarbo 95.9 0.015 5E-07 51.9 7.1 36 134-169 25-60 (343)
368 4imr_A 3-oxoacyl-(acyl-carrier 95.9 0.0077 2.6E-07 52.8 5.1 39 132-170 29-67 (275)
369 3nrc_A Enoyl-[acyl-carrier-pro 95.9 0.011 3.9E-07 51.5 6.2 39 132-170 22-62 (280)
370 3nx4_A Putative oxidoreductase 95.9 0.0033 1.1E-07 56.1 2.7 86 124-210 135-243 (324)
371 3nzo_A UDP-N-acetylglucosamine 95.9 0.0056 1.9E-07 56.7 4.3 36 134-169 33-69 (399)
372 2pk3_A GDP-6-deoxy-D-LYXO-4-he 95.9 0.011 3.8E-07 51.9 6.1 57 133-189 9-84 (321)
373 1p0f_A NADP-dependent alcohol 95.9 0.012 4.2E-07 53.6 6.5 77 134-211 190-296 (373)
374 1dlj_A UDP-glucose dehydrogena 95.9 0.0071 2.4E-07 56.3 5.0 70 138-211 2-120 (402)
375 3pi7_A NADH oxidoreductase; gr 95.9 0.0048 1.6E-07 55.8 3.7 92 117-210 147-265 (349)
376 3grf_A Ornithine carbamoyltran 95.9 0.065 2.2E-06 48.8 11.2 141 28-186 61-241 (328)
377 3k96_A Glycerol-3-phosphate de 95.9 0.0097 3.3E-07 54.6 5.8 72 136-208 29-133 (356)
378 1h5q_A NADP-dependent mannitol 95.9 0.0078 2.7E-07 51.5 4.9 37 133-169 11-47 (265)
379 1cdo_A Alcohol dehydrogenase; 95.9 0.013 4.4E-07 53.5 6.5 76 134-210 191-296 (374)
380 2jhf_A Alcohol dehydrogenase E 95.9 0.011 3.9E-07 53.9 6.1 77 134-211 190-296 (374)
381 4hp8_A 2-deoxy-D-gluconate 3-d 95.9 0.0073 2.5E-07 52.9 4.6 40 131-170 4-43 (247)
382 3rih_A Short chain dehydrogena 95.8 0.006 2E-07 54.2 4.1 39 132-170 37-75 (293)
383 2wsb_A Galactitol dehydrogenas 95.8 0.0097 3.3E-07 50.7 5.3 38 132-169 7-44 (254)
384 3e9n_A Putative short-chain de 95.8 0.0079 2.7E-07 51.3 4.6 36 133-169 2-37 (245)
385 3d3w_A L-xylulose reductase; u 95.8 0.01 3.4E-07 50.3 5.3 37 133-169 4-40 (244)
386 4f6c_A AUSA reductase domain p 95.8 0.0083 2.9E-07 55.5 5.1 38 134-171 67-104 (427)
387 2eih_A Alcohol dehydrogenase; 95.8 0.0076 2.6E-07 54.4 4.7 75 135-210 166-267 (343)
388 2rh8_A Anthocyanidin reductase 95.8 0.016 5.6E-07 51.3 6.8 33 136-168 9-41 (338)
389 1i36_A Conserved hypothetical 95.8 0.0091 3.1E-07 51.6 5.0 68 138-208 2-88 (264)
390 2x4g_A Nucleoside-diphosphate- 95.8 0.018 6.2E-07 51.0 7.1 53 137-189 14-87 (342)
391 4amu_A Ornithine carbamoyltran 95.8 0.085 2.9E-06 48.7 11.7 162 28-208 88-300 (365)
392 3uko_A Alcohol dehydrogenase c 95.8 0.0099 3.4E-07 54.4 5.5 93 117-210 175-297 (378)
393 3osu_A 3-oxoacyl-[acyl-carrier 95.8 0.011 3.8E-07 50.6 5.4 36 134-169 2-37 (246)
394 3ai3_A NADPH-sorbose reductase 95.8 0.011 3.8E-07 50.9 5.5 38 132-169 3-40 (263)
395 3fpc_A NADP-dependent alcohol 95.8 0.009 3.1E-07 54.1 5.0 88 122-211 154-269 (352)
396 1oju_A MDH, malate dehydrogena 95.8 0.013 4.5E-07 52.5 5.9 51 138-190 2-80 (294)
397 1ur5_A Malate dehydrogenase; o 95.8 0.016 5.6E-07 52.0 6.6 52 137-190 3-81 (309)
398 2x5o_A UDP-N-acetylmuramoylala 95.8 0.009 3.1E-07 56.1 5.1 37 133-170 2-38 (439)
399 1e3i_A Alcohol dehydrogenase, 95.8 0.017 5.9E-07 52.7 6.9 75 134-209 194-298 (376)
400 3i83_A 2-dehydropantoate 2-red 95.8 0.043 1.5E-06 49.1 9.4 71 137-208 3-105 (320)
401 3ay3_A NAD-dependent epimerase 95.7 0.0061 2.1E-07 52.5 3.6 54 136-189 2-73 (267)
402 3i4f_A 3-oxoacyl-[acyl-carrier 95.7 0.01 3.4E-07 51.1 5.0 37 133-169 4-40 (264)
403 3lf2_A Short chain oxidoreduct 95.7 0.012 4E-07 51.1 5.4 38 132-169 4-41 (265)
404 3awd_A GOX2181, putative polyo 95.7 0.011 3.8E-07 50.4 5.3 37 133-169 10-46 (260)
405 2dc1_A L-aspartate dehydrogena 95.7 0.0087 3E-07 51.3 4.5 70 138-208 2-81 (236)
406 3ak4_A NADH-dependent quinucli 95.7 0.012 4E-07 50.8 5.4 38 132-169 8-45 (263)
407 1vl8_A Gluconate 5-dehydrogena 95.7 0.011 3.8E-07 51.4 5.3 40 130-169 15-54 (267)
408 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.7 0.0075 2.6E-07 57.5 4.5 71 138-209 3-104 (478)
409 1uzm_A 3-oxoacyl-[acyl-carrier 95.7 0.009 3.1E-07 51.2 4.6 40 131-170 10-49 (247)
410 1ek6_A UDP-galactose 4-epimera 95.7 0.012 4.3E-07 52.2 5.7 33 136-168 2-34 (348)
411 3ged_A Short-chain dehydrogena 95.7 0.011 3.9E-07 51.5 5.2 34 136-169 2-35 (247)
412 2ae2_A Protein (tropinone redu 95.7 0.012 4E-07 50.8 5.3 37 133-169 6-42 (260)
413 4eso_A Putative oxidoreductase 95.7 0.012 4E-07 50.9 5.3 37 133-169 5-41 (255)
414 3p7m_A Malate dehydrogenase; p 95.7 0.022 7.4E-07 51.7 7.2 55 135-190 4-84 (321)
415 1oc2_A DTDP-glucose 4,6-dehydr 95.7 0.011 3.8E-07 52.6 5.2 53 137-189 5-85 (348)
416 2fzw_A Alcohol dehydrogenase c 95.7 0.016 5.6E-07 52.7 6.5 77 134-211 189-295 (373)
417 3ado_A Lambda-crystallin; L-gu 95.7 0.012 4.1E-07 53.4 5.5 52 136-188 6-96 (319)
418 2pnf_A 3-oxoacyl-[acyl-carrier 95.7 0.01 3.4E-07 50.3 4.7 38 132-169 3-40 (248)
419 1rpn_A GDP-mannose 4,6-dehydra 95.7 0.013 4.4E-07 51.9 5.6 36 134-169 12-47 (335)
420 2c20_A UDP-glucose 4-epimerase 95.7 0.015 5.2E-07 51.3 6.1 53 137-189 2-77 (330)
421 1jay_A Coenzyme F420H2:NADP+ o 95.7 0.0081 2.8E-07 50.1 4.0 70 138-209 2-98 (212)
422 2v6g_A Progesterone 5-beta-red 95.7 0.013 4.5E-07 52.3 5.7 54 136-189 1-82 (364)
423 2jl1_A Triphenylmethane reduct 95.7 0.0065 2.2E-07 52.6 3.5 53 137-189 1-76 (287)
424 2fwm_X 2,3-dihydro-2,3-dihydro 95.7 0.012 4.2E-07 50.4 5.3 37 133-169 4-40 (250)
425 4aj2_A L-lactate dehydrogenase 95.7 0.021 7.1E-07 52.1 7.0 55 134-190 17-98 (331)
426 2pd6_A Estradiol 17-beta-dehyd 95.7 0.012 4.2E-07 50.3 5.2 37 133-169 4-40 (264)
427 3f1l_A Uncharacterized oxidore 95.7 0.012 4.3E-07 50.5 5.2 37 133-169 9-45 (252)
428 3ppi_A 3-hydroxyacyl-COA dehyd 95.7 0.011 3.6E-07 51.6 4.9 38 132-169 26-63 (281)
429 2o3j_A UDP-glucose 6-dehydroge 95.6 0.015 5E-07 55.5 6.2 74 137-211 10-138 (481)
430 1uls_A Putative 3-oxoacyl-acyl 95.6 0.013 4.3E-07 50.2 5.2 37 133-169 2-38 (245)
431 2d1y_A Hypothetical protein TT 95.6 0.012 4.2E-07 50.6 5.2 38 133-170 3-40 (256)
432 2jah_A Clavulanic acid dehydro 95.6 0.013 4.4E-07 50.2 5.3 37 133-169 4-40 (247)
433 1f8f_A Benzyl alcohol dehydrog 95.6 0.0086 2.9E-07 54.6 4.4 94 116-210 171-291 (371)
434 3pk0_A Short-chain dehydrogena 95.6 0.01 3.5E-07 51.4 4.7 38 132-169 6-43 (262)
435 3svt_A Short-chain type dehydr 95.6 0.013 4.3E-07 51.3 5.3 38 132-169 7-44 (281)
436 3i1j_A Oxidoreductase, short c 95.6 0.011 3.6E-07 50.3 4.7 37 133-169 11-47 (247)
437 1fmc_A 7 alpha-hydroxysteroid 95.6 0.01 3.5E-07 50.5 4.5 38 132-169 7-44 (255)
438 3s55_A Putative short-chain de 95.6 0.013 4.5E-07 51.0 5.3 38 132-169 6-43 (281)
439 3eag_A UDP-N-acetylmuramate:L- 95.6 0.031 1.1E-06 50.3 7.9 120 136-262 4-133 (326)
440 3oig_A Enoyl-[acyl-carrier-pro 95.6 0.014 4.9E-07 50.2 5.5 38 132-169 3-42 (266)
441 3aoe_E Glutamate dehydrogenase 95.6 0.023 7.8E-07 53.4 7.2 53 115-168 193-250 (419)
442 2ew8_A (S)-1-phenylethanol deh 95.6 0.013 4.5E-07 50.2 5.2 38 133-170 4-41 (249)
443 2z1n_A Dehydrogenase; reductas 95.6 0.013 4.6E-07 50.4 5.3 37 133-169 4-40 (260)
444 1yb1_A 17-beta-hydroxysteroid 95.6 0.013 4.6E-07 50.8 5.3 38 132-169 27-64 (272)
445 3ctm_A Carbonyl reductase; alc 95.6 0.011 3.8E-07 51.3 4.7 38 133-170 31-68 (279)
446 3oid_A Enoyl-[acyl-carrier-pro 95.6 0.0059 2E-07 52.9 3.0 35 135-169 3-38 (258)
447 4ej6_A Putative zinc-binding d 95.6 0.0074 2.5E-07 55.3 3.7 86 124-211 172-287 (370)
448 1zk4_A R-specific alcohol dehy 95.6 0.011 3.7E-07 50.3 4.5 37 133-169 3-39 (251)
449 4iiu_A 3-oxoacyl-[acyl-carrier 95.6 0.014 4.7E-07 50.5 5.3 35 133-167 23-57 (267)
450 3e48_A Putative nucleoside-dip 95.6 0.011 3.8E-07 51.3 4.7 52 138-189 2-75 (289)
451 2q2v_A Beta-D-hydroxybutyrate 95.6 0.011 3.7E-07 50.9 4.5 37 133-169 1-37 (255)
452 2yy7_A L-threonine dehydrogena 95.6 0.01 3.5E-07 51.8 4.5 54 136-189 2-78 (312)
453 1iy8_A Levodione reductase; ox 95.6 0.014 4.8E-07 50.5 5.3 37 133-169 10-46 (267)
454 3pxx_A Carveol dehydrogenase; 95.6 0.014 4.8E-07 50.7 5.3 37 133-169 7-43 (287)
455 2ag5_A DHRS6, dehydrogenase/re 95.6 0.012 4E-07 50.4 4.7 37 133-169 3-39 (246)
456 1hyh_A L-hicdh, L-2-hydroxyiso 95.5 0.017 5.7E-07 51.7 5.8 53 137-191 2-81 (309)
457 1xg5_A ARPG836; short chain de 95.5 0.013 4.5E-07 50.9 5.0 37 133-169 29-65 (279)
458 1zem_A Xylitol dehydrogenase; 95.5 0.015 5E-07 50.3 5.2 37 133-169 4-40 (262)
459 4egb_A DTDP-glucose 4,6-dehydr 95.5 0.0078 2.7E-07 53.6 3.6 37 133-169 21-59 (346)
460 3u5t_A 3-oxoacyl-[acyl-carrier 95.5 0.011 3.9E-07 51.4 4.6 35 134-168 25-59 (267)
461 2zat_A Dehydrogenase/reductase 95.5 0.012 4.2E-07 50.6 4.7 38 132-169 10-47 (260)
462 3gaz_A Alcohol dehydrogenase s 95.5 0.0032 1.1E-07 57.0 1.0 76 134-210 149-248 (343)
463 3uf0_A Short-chain dehydrogena 95.5 0.015 5.2E-07 50.8 5.3 38 132-169 27-64 (273)
464 1evy_A Glycerol-3-phosphate de 95.5 0.0089 3.1E-07 54.4 4.0 70 138-208 17-124 (366)
465 4dqv_A Probable peptide synthe 95.5 0.012 4.3E-07 55.5 5.1 38 132-169 69-109 (478)
466 2bgk_A Rhizome secoisolaricire 95.5 0.015 5.1E-07 50.2 5.2 38 132-169 12-49 (278)
467 3l4b_C TRKA K+ channel protien 95.5 0.0099 3.4E-07 50.0 4.0 52 138-190 2-76 (218)
468 1y81_A Conserved hypothetical 95.5 0.038 1.3E-06 43.7 7.2 55 134-189 12-79 (138)
469 3sx2_A Putative 3-ketoacyl-(ac 95.5 0.015 5.3E-07 50.5 5.3 38 132-169 9-46 (278)
470 3mog_A Probable 3-hydroxybutyr 95.5 0.0094 3.2E-07 57.0 4.2 33 136-169 5-37 (483)
471 4fc7_A Peroxisomal 2,4-dienoyl 95.5 0.015 5.2E-07 50.7 5.2 37 133-169 24-60 (277)
472 2hq1_A Glucose/ribitol dehydro 95.5 0.013 4.5E-07 49.6 4.7 34 134-167 3-36 (247)
473 1yde_A Retinal dehydrogenase/r 95.5 0.016 5.4E-07 50.5 5.3 38 132-169 5-42 (270)
474 2rhc_B Actinorhodin polyketide 95.5 0.016 5.4E-07 50.6 5.3 37 133-169 19-55 (277)
475 1w6u_A 2,4-dienoyl-COA reducta 95.5 0.015 5.3E-07 50.9 5.2 37 133-169 23-59 (302)
476 1hxh_A 3BETA/17BETA-hydroxyste 95.5 0.012 4E-07 50.6 4.4 37 133-169 3-39 (253)
477 3gk3_A Acetoacetyl-COA reducta 95.4 0.017 5.8E-07 50.1 5.4 35 134-168 23-57 (269)
478 3tz6_A Aspartate-semialdehyde 95.4 0.028 9.5E-07 51.5 7.0 76 136-211 1-97 (344)
479 3fbg_A Putative arginate lyase 95.4 0.019 6.6E-07 51.8 5.9 75 135-209 150-249 (346)
480 1yxm_A Pecra, peroxisomal tran 95.4 0.016 5.5E-07 50.9 5.2 37 133-169 15-51 (303)
481 3ghy_A Ketopantoate reductase 95.4 0.021 7E-07 51.5 6.0 71 136-208 3-104 (335)
482 1guz_A Malate dehydrogenase; o 95.4 0.026 8.8E-07 50.6 6.6 51 138-190 2-80 (310)
483 3lyl_A 3-oxoacyl-(acyl-carrier 95.4 0.014 4.8E-07 49.7 4.7 37 133-169 2-38 (247)
484 2cdc_A Glucose dehydrogenase g 95.4 0.011 3.9E-07 53.7 4.3 74 136-210 181-280 (366)
485 3tl2_A Malate dehydrogenase; c 95.4 0.021 7.1E-07 51.7 6.0 55 135-190 7-89 (315)
486 3ldh_A Lactate dehydrogenase; 95.4 0.017 5.8E-07 52.7 5.4 54 135-190 20-100 (330)
487 1n2s_A DTDP-4-, DTDP-glucose o 95.4 0.01 3.5E-07 51.6 3.9 51 138-189 2-64 (299)
488 3l6e_A Oxidoreductase, short-c 95.4 0.011 3.6E-07 50.5 3.8 35 135-169 2-36 (235)
489 3t4x_A Oxidoreductase, short c 95.4 0.013 4.6E-07 50.7 4.5 38 132-169 6-43 (267)
490 4dry_A 3-oxoacyl-[acyl-carrier 95.4 0.012 4E-07 51.8 4.1 39 131-169 28-66 (281)
491 1x1t_A D(-)-3-hydroxybutyrate 95.4 0.013 4.5E-07 50.4 4.4 37 134-170 2-38 (260)
492 1dhr_A Dihydropteridine reduct 95.4 0.019 6.4E-07 48.9 5.3 37 134-170 5-41 (241)
493 2hun_A 336AA long hypothetical 95.4 0.015 5.1E-07 51.5 4.9 55 135-189 2-85 (336)
494 1xq1_A Putative tropinone redu 95.4 0.014 4.7E-07 50.2 4.5 38 132-169 10-47 (266)
495 1sby_A Alcohol dehydrogenase; 95.4 0.015 5.1E-07 49.8 4.7 37 133-169 2-39 (254)
496 2gdz_A NAD+-dependent 15-hydro 95.4 0.017 6E-07 49.8 5.2 36 134-169 5-40 (267)
497 3pgx_A Carveol dehydrogenase; 95.4 0.017 5.9E-07 50.3 5.1 37 132-168 11-47 (280)
498 2zcu_A Uncharacterized oxidore 95.3 0.012 4.1E-07 50.7 4.1 52 138-189 1-75 (286)
499 1smk_A Malate dehydrogenase, g 95.3 0.021 7.3E-07 51.6 5.8 56 136-191 8-88 (326)
500 3aog_A Glutamate dehydrogenase 95.3 0.03 1E-06 52.9 7.0 53 115-168 210-267 (440)
No 1
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=100.00 E-value=1.5e-82 Score=574.78 Aligned_cols=256 Identities=42% Similarity=0.718 Sum_probs=249.2
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCH
Q 024306 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (269)
Q Consensus 3 ~~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~ 82 (269)
++.|++|+||+|+||+||+|.+|+++|.|+|+++||+++.+.||++++|+||++.|++||+|++||||+||+|||+|+++
T Consensus 48 ~~~g~~P~LavIlVG~dpaS~~Yv~~K~k~c~~vGi~s~~~~lp~~~se~ell~~I~~LN~D~~V~GIlVQlPLP~hid~ 127 (303)
T 4b4u_A 48 AKTGRTPILATILVGDDGASATYVRMKGNACRRVGMDSLKIELPQETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDE 127 (303)
T ss_dssp HHHSCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCH
T ss_pred HcCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEecCccCCHHHHHHHHHHhcCCCCccEEEEeCCCccccCh
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE
Q 024306 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT 162 (269)
Q Consensus 83 ~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~ 162 (269)
.+++++|+|+|||||||+.|.|+|+.| .+.|+||||.|++++|++|+++++||+++|||||..||||++.+|.++||+
T Consensus 128 ~~i~~~I~p~KDVDG~hp~N~G~L~~g--~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~AT 205 (303)
T 4b4u_A 128 RACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANAT 205 (303)
T ss_dssp HHHHHHSCGGGCTTCCCHHHHHHHHTT--CCCCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE
T ss_pred HHHHhccCcccccCccCcchHHHhcCC--CCcccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCE
Confidence 999999999999999999999999976 678999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceeccc
Q 024306 163 VSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPV 242 (269)
Q Consensus 163 Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpv 242 (269)
||+||++|+++.+++++|||||+|+|+|++++++|+|+|++|||+|+|+.++ +++|||||++++++++++|||
T Consensus 206 VTi~Hs~T~dl~~~~~~ADIvV~A~G~p~~i~~d~vk~GavVIDVGin~~~~-------~~vGDVdf~~v~~~a~~iTPV 278 (303)
T 4b4u_A 206 VTICHSRTQNLPELVKQADIIVGAVGKAELIQKDWIKQGAVVVDAGFHPRDG-------GGVGDIQLQGIEEIASAYTPV 278 (303)
T ss_dssp EEEECTTCSSHHHHHHTCSEEEECSCSTTCBCGGGSCTTCEEEECCCBCCTT-------SCBCSBCCTTGGGTCSEECCS
T ss_pred EEEecCCCCCHHHHhhcCCeEEeccCCCCccccccccCCCEEEEeceecCCC-------CeECCcCHHHHhhhCcEECCC
Confidence 9999999999999999999999999999999999999999999999998654 799999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHhC
Q 024306 243 PGGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 243 pgGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
||||||||++|||+|+++|+|+.+|
T Consensus 279 PGGVGPmTiamLl~Ntv~aa~r~~G 303 (303)
T 4b4u_A 279 PGGVGPMTITTLIRQTVEAAEKALG 303 (303)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCchHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999876
No 2
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=100.00 E-value=4.5e-81 Score=566.57 Aligned_cols=266 Identities=52% Similarity=0.856 Sum_probs=254.4
Q ss_pred CCC-CCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCH
Q 024306 4 SIG-KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (269)
Q Consensus 4 ~~~-~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~ 82 (269)
+.| ++|+||+|+||+||+|++|+++|.|+|+++||+++++.||++++++||++.|++||+|++||||+||+|||+|+++
T Consensus 32 ~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~ 111 (300)
T 4a26_A 32 LYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNE 111 (300)
T ss_dssp HTTTCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCH
T ss_pred hCCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCH
Confidence 446 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE
Q 024306 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT 162 (269)
Q Consensus 83 ~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~ 162 (269)
.+++++|+|+|||||+|++|.|+|+.|...++|+||||+|++++|++|+++++||+|+|||+|+.||+|++++|.++||+
T Consensus 112 ~~v~~~I~p~KDVDG~~~~N~G~l~~g~~~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAt 191 (300)
T 4a26_A 112 NRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENAT 191 (300)
T ss_dssp HHHHHTSCGGGCTTCCSHHHHHHHHCTTCCCSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCE
T ss_pred HHHHhhCCcccccccCCcceEEEeecCCCcCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCe
Confidence 99999999999999999999999997744678999999999999999999999999999999998899999999999999
Q ss_pred EEEEeCCCCCHh--hhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceec
Q 024306 163 VSIVHALTKNPE--QITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVIT 240 (269)
Q Consensus 163 Vti~~~~t~~l~--~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~t 240 (269)
||+|||+|.++. +++++|||||+|+|.|++++.+|+++|++|||++++|.++++.+.|++++|||||+++.++++++|
T Consensus 192 Vtv~~~~T~~l~l~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~~~~~~~g~kl~GDVdf~~v~~~a~~iT 271 (300)
T 4a26_A 192 VTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTTPVPDPSRKDGYRLVGDVCFEEAAARAAWIS 271 (300)
T ss_dssp EEEECTTSCHHHHHHHHHTCSEEEECSCCTTCBCGGGSCTTCEEEECCCEEESCSCSTTSCEEECSBCHHHHTTTCSEEE
T ss_pred EEEEeCCCCCchhhhhhccCCEEEECCCCCCCCcHHhcCCCcEEEEEeccCCcCCcccCCceeecCccHHHHHhhceEeC
Confidence 999999999999 999999999999999999999999999999999999987654444568999999999999999999
Q ss_pred ccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 241 PVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 241 pvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
||||||||||++|||+|+++++++|.+.+
T Consensus 272 PVPGGVGpmT~a~Ll~Ntv~aa~~~~~~~ 300 (300)
T 4a26_A 272 PVPGGVGPMTIAMLLENTLEAFKAALGVS 300 (300)
T ss_dssp CTTTSSSHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCcChHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998864
No 3
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=100.00 E-value=3.2e-80 Score=557.19 Aligned_cols=257 Identities=51% Similarity=0.799 Sum_probs=248.1
Q ss_pred CCCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCH
Q 024306 3 KSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE 82 (269)
Q Consensus 3 ~~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~ 82 (269)
++.+++|+||+|+||+||+|++|+++|.|+|+++||+++++.||++++++||++.|++||+|++||||+||+|||+|+++
T Consensus 30 ~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~ 109 (286)
T 4a5o_A 30 QQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDA 109 (286)
T ss_dssp HTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCH
T ss_pred hcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCE
Q 024306 83 GKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT 162 (269)
Q Consensus 83 ~~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~ 162 (269)
.+++++|+|+|||||+|++|.|+|+.| .++|+||||.|++++|++|+++++||+|+|||+|+.||+|++++|.++||+
T Consensus 110 ~~v~~~I~p~KDVDG~~~~N~g~l~~g--~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAt 187 (286)
T 4a5o_A 110 SLLLERIHPDKDVDGFHPYNIGRLAQR--MPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCT 187 (286)
T ss_dssp HHHHHTSCGGGCTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCE
T ss_pred HHHHhhCCcccccccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe
Confidence 999999999999999999999999976 578999999999999999999999999999999998999999999999999
Q ss_pred EEEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceeccc
Q 024306 163 VSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPV 242 (269)
Q Consensus 163 Vti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpv 242 (269)
||+||++|+++++++++|||||+|+|.|++++++|+++|++|||++++|.++ ++++|||||+++.++++++|||
T Consensus 188 Vtv~hs~T~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~~------gkl~GDVdf~~v~~~a~~iTPV 261 (286)
T 4a5o_A 188 VTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQAD------GRLVGDVEYEVAAQRASWITPV 261 (286)
T ss_dssp EEEECTTCSCHHHHHHTCSEEEECCCCTTCBCGGGSCTTCEEEECCSCSSCC------CCSSCSBCHHHHHHHCSEECCS
T ss_pred EEEEeCCCcCHHHHhccCCEEEECCCCCCCCCHHHcCCCeEEEEeccccccc------CCcccCccHHHHHhhceEeCCC
Confidence 9999999999999999999999999999999999999999999999999765 2899999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHhC
Q 024306 243 PGGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 243 pgGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
||||||||++|||+|+++++++|.+
T Consensus 262 PGGVGpmT~a~Ll~ntv~aa~~~~~ 286 (286)
T 4a5o_A 262 PGGVGPMTRACLLENTLHAAEHLHD 286 (286)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999998754
No 4
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=100.00 E-value=8.9e-80 Score=554.51 Aligned_cols=254 Identities=49% Similarity=0.790 Sum_probs=245.3
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i 85 (269)
+.+|+||+|+||+||+|++|+++|.|+|+++||+++++.||++++++||++.|++||+|++||||+||+|||+|+++.++
T Consensus 31 ~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v 110 (285)
T 3p2o_A 31 GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLI 110 (285)
T ss_dssp TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHH
T ss_pred CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHH
Confidence 55999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccccccccceecccccCCCCCc-cccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024306 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPL-FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (269)
Q Consensus 86 ~~~i~p~kdvdg~~~~n~g~l~~g~~~~~-~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vt 164 (269)
+++|+|+|||||+|++|.|+|+.| .+. |+||||.|++++|++++++++||+|+|||+|+.||+|++++|.++||+||
T Consensus 111 ~~~I~p~KDVDg~~~~N~g~l~~g--~~~g~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVt 188 (285)
T 3p2o_A 111 LESIISSKDVDGFHPINVGYLNLG--LESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVS 188 (285)
T ss_dssp HHHSCGGGCTTCCSHHHHHHHHTT--CCSSCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred HhhCCcccccccCCHhhhhhhhcC--CCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEE
Confidence 999999999999999999999976 455 99999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCC
Q 024306 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPG 244 (269)
Q Consensus 165 i~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpg 244 (269)
+||++++++.+++++|||||+|+|.|++++++|+++|++|||++++|.++ ++++|||||+++.++++++|||||
T Consensus 189 v~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~~~~------gkl~GDVdf~~v~~~a~~iTPVPG 262 (285)
T 3p2o_A 189 VCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLES------GKIVGDVDFEEVSKKSSYITPVPG 262 (285)
T ss_dssp EECTTCSCHHHHHTTCSEEEECSSCTTCBCGGGSCTTEEEEECCCEECTT------SCEECSBCHHHHTTTEEEECCSSS
T ss_pred EEeCCchhHHHHhhcCCEEEECCCCCCcCCHHHcCCCeEEEEeccCcccC------CCEeccccHHHHHhhheEeCCCCC
Confidence 99999999999999999999999999999999999999999999999765 289999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHhC
Q 024306 245 GVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 245 GvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
||||||++|||+|+++++++|.+
T Consensus 263 GVGpmT~a~Ll~ntv~a~~~~~~ 285 (285)
T 3p2o_A 263 GVGPMTIAMLLENTVKSAKNRLN 285 (285)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTC-
T ss_pred cCcHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999998864
No 5
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=100.00 E-value=1.3e-79 Score=553.52 Aligned_cols=255 Identities=44% Similarity=0.714 Sum_probs=246.3
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.+++|+||+|+||+||+|++|+++|.|+|+++||+++++.||++++++||++.|++||+|++||||+||+|||+|+++.
T Consensus 30 ~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~ 109 (285)
T 3l07_A 30 HTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKN 109 (285)
T ss_dssp HHCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHH
T ss_pred cCCCCceEEEEEECCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+|||||+|++|.|+++.|. .++|+||||.|++++|++++++++||+++|||+|+.||+|++++|.++||+|
T Consensus 110 ~v~~~I~p~KDVDG~~~~N~G~l~~g~-~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtV 188 (285)
T 3l07_A 110 NVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATV 188 (285)
T ss_dssp HHHHHSCGGGBTTCCSHHHHHHHHHTC-TTCCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred HHHhhCCcccccccCChhheeehhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeE
Confidence 999999999999999999999999772 2789999999999999999999999999999999989999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+|||+++++.+++++|||||+|+|.|++++++|+++|++|||++++|.+. +++|||||+++.++++++||||
T Consensus 189 tv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~~~g-------~l~GDVdf~~v~~~a~~iTPVP 261 (285)
T 3l07_A 189 TTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDG-------KIVGDVDFAAVKDKVAAITPVP 261 (285)
T ss_dssp EEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCEEETT-------EEECSBCHHHHTTTCSEECCSS
T ss_pred EEEeCCchhHHHhcccCCEEEECCCCCCCCCHHHcCCCcEEEEecccCcCC-------ceecCccHHHHHhhheEeCCCC
Confidence 999999999999999999999999999999999999999999999999752 8999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHh
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
|||||||++|||+|+++++++|.
T Consensus 262 GGVGpmT~a~Ll~ntv~a~~~~~ 284 (285)
T 3l07_A 262 GGVGPMTITELLYNTFQCAQELN 284 (285)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHTC
T ss_pred CcChHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999874
No 6
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=100.00 E-value=3.7e-79 Score=553.75 Aligned_cols=262 Identities=46% Similarity=0.786 Sum_probs=245.4
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCC--CCHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQH--LDEG 83 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~--~~~~ 83 (269)
+++|+||+|+||+||+|.+|+++|.|+|+++||+++.+.||++++++||++.|++||+|++||||+||+|||+| +|+.
T Consensus 33 ~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~ 112 (301)
T 1a4i_A 33 GFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTE 112 (301)
T ss_dssp TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHH
T ss_pred CCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHH
Confidence 47799999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+|||||||++|.|+|+.|...++|+||||+|++++|++++++++||+|+|||+|+.||+|++++|.++||+|
T Consensus 113 ~i~~~I~p~KDVDG~hp~N~G~l~~g~~~~~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtV 192 (301)
T 1a4i_A 113 EVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATV 192 (301)
T ss_dssp HHHHTSCGGGBTTCCSHHHHHHHHTTCCSSCCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred HHHhccCCCCCccCCChhhHHHHhcCCCCCCccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeE
Confidence 99999999999999999999999987434789999999999999999999999999999999989999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++++++.+++++|||||+|+|.|++++++|+++|++|||+++++.+++++.+|++++|||||+++.++++++||||
T Consensus 193 tv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~~~~d~~~~~g~klvGDVdf~~v~~~a~~iTPVP 272 (301)
T 1a4i_A 193 TTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINYVPDDKKPNGRKVVGDVAYDEAKERASFITPVP 272 (301)
T ss_dssp EEECTTCSSHHHHHTTCSEEEECCCCTTCBCGGGSCTTCEEEECCCBC----------CCBCSBCHHHHTTTCSEECCSS
T ss_pred EEEECCcccHHHHhccCCEEEECCCCcccCCHHHcCCCcEEEEccCCCcccccccCCCeeeccccHHHhhhhceEeCCCC
Confidence 99999999999999999999999999999999999999999999999976543333458999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHhC
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
|||||||++|||+|+++++++|+.
T Consensus 273 GGVGpmTiamLl~Ntv~aa~~~~~ 296 (301)
T 1a4i_A 273 GGVGPMTVAMLMQSTVESAKRFLE 296 (301)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999998875
No 7
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=100.00 E-value=6.5e-79 Score=549.15 Aligned_cols=256 Identities=46% Similarity=0.774 Sum_probs=247.2
Q ss_pred CCCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHH
Q 024306 4 SIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEG 83 (269)
Q Consensus 4 ~~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~ 83 (269)
+.+++|+||+|+||+||+|++|+++|.|+|+++||+++.+.||++++++||++.|++||+|++||||+||+|||+|+|+.
T Consensus 29 ~~~~~P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~ 108 (288)
T 1b0a_A 29 AGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNV 108 (288)
T ss_dssp TTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTTCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHH
T ss_pred cCCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHH
Confidence 33477999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEE
Q 024306 84 KILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 163 (269)
Q Consensus 84 ~i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~V 163 (269)
+++++|+|+|||||||++|.|+|+.| .++|+||||+|++++|++|+++++||+|+|||+|++||+|++++|.++||+|
T Consensus 109 ~i~~~I~p~KDVDG~~p~n~g~l~~g--~~~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtV 186 (288)
T 1b0a_A 109 KVLERIHPDKDVDGFHPYNVGRLCQR--APRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTT 186 (288)
T ss_dssp HHHTTSCTTTCTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEE
T ss_pred HHHhccCCccCcccCCccchhHHhCC--CCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeE
Confidence 99999999999999999999999976 5689999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+||++++++.+++++|||||+|+|.|++++++|+|+|++|||+++++.++ ++++|||||+++.++++++||||
T Consensus 187 tv~hs~t~~L~~~~~~ADIVI~Avg~p~lI~~~~vk~GavVIDVgi~r~~~------g~l~GDVdf~~v~~~a~~iTPVP 260 (288)
T 1b0a_A 187 TVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLEN------GKVVGDVVFEDAAKRASYITPVP 260 (288)
T ss_dssp EEECSSCSCHHHHHHHCSEEEECSCCTTCBCTTTSCTTCEEEECCCEECTT------SCEECSBCHHHHHHHCSEECCSS
T ss_pred EEEeCCchhHHHHhccCCEEEECCCCcCcCCHHHcCCCcEEEEccCCccCC------CCccCCcCHHHHhhhccEecCCC
Confidence 999999999999999999999999999999999999999999999998754 28999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHhC
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~~~ 267 (269)
|||||||++|||+|+++++++|+.
T Consensus 261 GGVGpmT~a~Ll~Ntv~aa~~~~~ 284 (288)
T 1b0a_A 261 GGVGPMTVATLIENTLQACVEYHD 284 (288)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCccHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999998865
No 8
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=100.00 E-value=9.6e-78 Score=538.67 Aligned_cols=250 Identities=32% Similarity=0.579 Sum_probs=241.9
Q ss_pred CCCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHH
Q 024306 5 IGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK 84 (269)
Q Consensus 5 ~~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~ 84 (269)
.|++|+||+|+||+||+|++|+++|.|+|+++|| ++.+.||++++++||++.|++||+|++||||+||+|||+|+++.+
T Consensus 24 l~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I~~lN~D~~v~GIlvqlPLP~~id~~~ 102 (276)
T 3ngx_A 24 SGLEPSLKLIQIGDNEAASIYARAKIRRGKKIGI-AVDLEKYDDISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYE 102 (276)
T ss_dssp TTCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTC-EEEEEEESSCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTCCHHH
T ss_pred hCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHCCe-EEEEECCCCCCHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCHHH
Confidence 4789999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE
Q 024306 85 ILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS 164 (269)
Q Consensus 85 i~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vt 164 (269)
++++|+|+|||||+|++|.|+|+.| .++|+||||.|++++|++++ ++||+|+|||+|+.||+|++++|.++||+||
T Consensus 103 v~~~I~p~KDVDG~~p~n~G~l~~g--~~~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVt 178 (276)
T 3ngx_A 103 IVRNIPYYKDVDALSPYNQGLIALN--REFLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVS 178 (276)
T ss_dssp HHTTSCGGGBTTCCSHHHHHHHHTT--CCSSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred HHhhCCCCCcccCCCccchhhhhcC--CCCCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEE
Confidence 9999999999999999999999977 67899999999999999998 9999999999999899999999999999999
Q ss_pred EEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCC
Q 024306 165 IVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPG 244 (269)
Q Consensus 165 i~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpg 244 (269)
+||++++++++++++|||||+|+|.|++++++|+++|++|||++++| ++ ++++|||||+++.++++++|||||
T Consensus 179 v~~~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvgi~~-~~------gkl~GDVdf~~v~~~a~~iTPVPG 251 (276)
T 3ngx_A 179 VCHSKTKDIGSMTRSSKIVVVAVGRPGFLNREMVTPGSVVIDVGINY-VN------DKVVGDANFEDLSEYVEAITPVPG 251 (276)
T ss_dssp EECTTCSCHHHHHHHSSEEEECSSCTTCBCGGGCCTTCEEEECCCEE-ET------TEEECSBCHHHHHTTSSEECCTTT
T ss_pred EEeCCcccHHHhhccCCEEEECCCCCccccHhhccCCcEEEEeccCc-cC------CceeccccHHHHhhhceEeCCCCC
Confidence 99999999999999999999999999999999999999999999998 33 289999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHh
Q 024306 245 GVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 245 GvGp~T~~mLl~n~v~a~~~~~ 266 (269)
||||||++|||+|++++++++.
T Consensus 252 GVGpmT~a~Ll~n~v~a~~~~~ 273 (276)
T 3ngx_A 252 GVGPITATNILENVVKAAEFQK 273 (276)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998653
No 9
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=100.00 E-value=2.1e-76 Score=531.21 Aligned_cols=249 Identities=45% Similarity=0.773 Sum_probs=241.9
Q ss_pred CCCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHH
Q 024306 6 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 85 (269)
Q Consensus 6 ~~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i 85 (269)
|++|+||+|+||+||+|++|+++|.|+|+++||+++.+.||++++++||++.|++||+|++||||+||+|||+|+|+.++
T Consensus 30 g~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i 109 (281)
T 2c2x_A 30 GRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAA 109 (281)
T ss_dssp TCCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHH
T ss_pred CCCceEEEEEeCCChhhHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCccccccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC--CCEE
Q 024306 86 LDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH--HATV 163 (269)
Q Consensus 86 ~~~i~p~kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~--ga~V 163 (269)
+++|+|+|||||||++|.|+|+.| .++|+||||+|++++|++++++++||+|+|||+|++||+|++++|.++ ||+|
T Consensus 110 ~~~I~p~KDVDG~~p~n~g~l~~g--~~~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atV 187 (281)
T 2c2x_A 110 LERVDPAKDADGLHPTNLGRLVLG--TPAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATV 187 (281)
T ss_dssp HHHSCGGGBTTSCCHHHHHHHHHT--CCCCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEE
T ss_pred HhhcCccCCccCCChhhHHHHhCC--CCCCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEE
Confidence 999999999999999999999977 568999999999999999999999999999999999999999999999 8999
Q ss_pred EEEeCCCCCHhhhcCCCCEEEeccCCCCcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC
Q 024306 164 SIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP 243 (269)
Q Consensus 164 ti~~~~t~~l~~~~~~aDiVIsAtg~p~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp 243 (269)
|+|||+++++.+.+++|||||+|+|+|++++++|+++|++|||+++++.++ .++|||| +++.++++++||||
T Consensus 188 tv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVgi~r~~~-------glvGDVd-~~v~~~a~~iTPVP 259 (281)
T 2c2x_A 188 TLCHTGTRDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTDD-------GLVGDVH-PDVWELAGHVSPNP 259 (281)
T ss_dssp EEECTTCSCHHHHHTTCSEEEECSCCTTCBCGGGSCTTCEEEECCEEEETT-------EEEESBC-GGGGGTCSEEECSS
T ss_pred EEEECchhHHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEccCCCCCC-------CccCccc-cchhhheeeecCCC
Confidence 999999999999999999999999999999999999999999999998654 3999999 89999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHH
Q 024306 244 GGVGPMTVAMLLSNTLDSAKR 264 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~ 264 (269)
|||||||++|||+|+++++++
T Consensus 260 GGVGpmT~a~Ll~ntv~aa~~ 280 (281)
T 2c2x_A 260 GGVGPLTRAFLLTNVVELAER 280 (281)
T ss_dssp SSSHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHh
Confidence 999999999999999999985
No 10
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=100.00 E-value=2.2e-62 Score=449.28 Aligned_cols=238 Identities=29% Similarity=0.421 Sum_probs=220.3
Q ss_pred CCCeEEEEEeCCCcchHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHH
Q 024306 7 KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL 86 (269)
Q Consensus 7 ~~p~L~~i~vg~~~~s~~y~~~~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~ 86 (269)
++|+|++|+||+||+|.+|+++|.|+|+++||+++.+.||++ +||++.|++||+|++||||+||+|||+|+++.+++
T Consensus 35 ~~P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~l~~~---~~l~~~i~~lN~d~~v~GIlvqlPlp~~~~~~~i~ 111 (320)
T 1edz_A 35 QGPLLVGFLANNDPAAKMYATWTQKTSESMGFRYDLRVIEDK---DFLEEAIIQANGDDSVNGIMVYFPVFGNAQDQYLQ 111 (320)
T ss_dssp CCCEEEEEECCCCHHHHHHHHHHHHHHHHHTCEEEEEECSSG---GGHHHHHHHHHHCTTCCEEEECSCSSSSHHHHHHT
T ss_pred CCCeEEEEEECCchhHHHHHHHHHHHHHHcCCEEEEEECCCh---HHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHH
Confidence 679999999999999999999999999999999999999974 67999999999999999999999999999999999
Q ss_pred hcCCccccccccccceecccccCCC-------CCccccCCHHHHHHHHHH---------hCCCCccceEEEEcCCcccHH
Q 024306 87 DAVSLEKDVDGFHPLNIGNLAMRGR-------EPLFIPCTPKGCIELLIR---------SGVEIMGKNAVVIGRSNIVGL 150 (269)
Q Consensus 87 ~~i~p~kdvdg~~~~n~g~l~~g~~-------~~~~~p~t~~g~~~~l~~---------~~~~l~gk~v~ViG~gg~vg~ 150 (269)
++|+|+|||||||+.|.|+|+.|.. .++|+||||+|++++|++ ++++++|++|+|||+|++||+
T Consensus 112 ~~I~p~KDVDG~~~~n~g~l~~~~~~l~~~~~~~~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~ 191 (320)
T 1edz_A 112 QVVCKEKDVEGLNHVYYQNLYHNVRYLDKENRLKSILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGR 191 (320)
T ss_dssp TTSCTTTBTTCCSHHHHHHHHTTCCBSSSSSCSBCCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHH
T ss_pred hccCcccccCcCChhhhHHHhcCCccccccccCCCcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHH
Confidence 9999999999999999999987621 258999999999999999 788999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEeCC-----------------------C--CCHhhhcCCCCEEEeccCCCCc-ccCCCcCCCcEE
Q 024306 151 PTSLLLQRHHATVSIVHAL-----------------------T--KNPEQITSEADIVIAAAGVANL-VRGSWLKPGAVV 204 (269)
Q Consensus 151 ~~a~~L~~~ga~Vti~~~~-----------------------t--~~l~~~~~~aDiVIsAtg~p~~-i~~~~~~~g~vV 204 (269)
++|++|.++||+|++|+|+ + .++.+++++|||||+|||+|++ ++.+|+++|++|
T Consensus 192 ~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~e~vk~GavV 271 (320)
T 1edz_A 192 PLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPTEYIKEGAVC 271 (320)
T ss_dssp HHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCTTTSCTTEEE
T ss_pred HHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECCCCCcceeCHHHcCCCeEE
Confidence 9999999999999999664 2 5688999999999999999998 999999999999
Q ss_pred EEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHH
Q 024306 205 LDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 265 (269)
Q Consensus 205 iDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~ 265 (269)
||+++++ |+| +++.++++++||| |||||++|||+|+++++++.
T Consensus 272 IDVgi~r--------------D~d-~~v~~~a~~itPv---VGpmT~a~Ll~n~~~a~~~~ 314 (320)
T 1edz_A 272 INFACTK--------------NFS-DDVKEKASLYVPM---TGKVTIAMLLRNMLRLVRNV 314 (320)
T ss_dssp EECSSSC--------------CBC-GGGGTTEEEEESC---CHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCc--------------ccc-hhHHhhCCeeCCC---ccHHHHHHHHHHHHHHHHHh
Confidence 9999875 333 3567889999987 99999999999999999853
No 11
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=5.5e-37 Score=277.36 Aligned_cols=218 Identities=18% Similarity=0.219 Sum_probs=184.2
Q ss_pred eCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 024306 16 VGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 93 (269)
Q Consensus 16 vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~k 93 (269)
+| +|.+||+++.+++ +|+++|+++.|..|+. ++++|.+.++.+++ +++.|+|||+|||+.+ .++++.++| .+
T Consensus 11 iG-~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~v~~l~~-~~~~G~nVTiP~K~~v--~~~ld~ls~~A~ 84 (282)
T 3fbt_A 11 IG-EKLGHSHSSYIHKLIFEKVGIKGIYNLFEV--PKEKLKESVDTFKI-IKCGGLNVTIPYKVEV--MKELYEISEKAR 84 (282)
T ss_dssp EE-SSCCCCHHHHHHHHHHHHHTCCEEEEEEEC--CGGGHHHHHHHHHH-TTCCEEEECTTCTTGG--GGGCSEECHHHH
T ss_pred EC-CCccccchHHHHHHHHHHcCCCcEEEEEEC--CHHHHHHHHHHHhc-CCCCEEEEcCCCHHHH--HHHHHhcCHHHH
Confidence 35 8999999999886 9999999999999965 57899999999998 6899999999999854 889999999 68
Q ss_pred cccccccc-e-ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC
Q 024306 94 DVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT 170 (269)
Q Consensus 94 dvdg~~~~-n-~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t 170 (269)
.+++++-+ + .|++. |+|| |..|+++.|++++++++||+++|+|+||+ |++++..|.+.|+ +|++++|+.
T Consensus 85 ~iGAVNTv~~~~g~l~-G~NT------D~~G~~~~L~~~~~~~~~k~vlvlGaGGa-araia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 85 KIGAVNTLKFSREGIS-GFNT------DYIGFGKMLSKFRVEIKNNICVVLGSGGA-ARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp HHTCCCEEEECSSCEE-EECC------HHHHHHHHHHHTTCCCTTSEEEEECSSTT-HHHHHHHHHHTTCSEEEEEESCH
T ss_pred HcCCcceEEeeCCEEE-eeCC------cHHHHHHHHHHcCCCccCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEeCCH
Confidence 88876433 2 35665 6655 55999999999999999999999999998 9999999999998 899999874
Q ss_pred CC---------------HhhhcCCCCEEEeccCC---CC----cccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccc
Q 024306 171 KN---------------PEQITSEADIVIAAAGV---AN----LVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVC 228 (269)
Q Consensus 171 ~~---------------l~~~~~~aDiVIsAtg~---p~----~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd 228 (269)
.. +.+ + ++|+|||||+. |+ +++.++++++.+|+|+.|+|.+| +|+
T Consensus 157 ~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~T-------~ll---- 223 (282)
T 3fbt_A 157 EKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVET-------LFL---- 223 (282)
T ss_dssp HHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSSC-------HHH----
T ss_pred HHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEEeeCCCCC-------HHH----
Confidence 21 112 3 89999999973 43 36778899999999999999988 688
Q ss_pred hHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 229 YEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 229 ~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
..++..|+. +.+|.+ ||++|++++||+|+|.+
T Consensus 224 --~~A~~~G~~--~~~Gl~-----MLv~Qa~~~f~lwtg~~ 255 (282)
T 3fbt_A 224 --KYARESGVK--AVNGLY-----MLVSQAAASEEIWNDIS 255 (282)
T ss_dssp --HHHHHTTCE--EECSHH-----HHHHHHHHHHHHHHTCC
T ss_pred --HHHHHCcCe--EeCcHH-----HHHHHHHHHHHHHcCCC
Confidence 447888984 467785 99999999999999963
No 12
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=100.00 E-value=3.9e-36 Score=275.69 Aligned_cols=221 Identities=20% Similarity=0.270 Sum_probs=186.0
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+||+++.+++ +|+++|+++.|..|+. ++++|.+.++.++. +++.|+|||+|||+.+ .++++.++| +
T Consensus 42 viG-~Pi~hS~SP~ihn~~f~~~Gl~~~Y~~~~v--~~~~l~~~~~~l~~-~~~~G~nVTiP~K~~v--~~~lD~ls~~A 115 (315)
T 3tnl_A 42 LIA-TPIRHSLSPTMHNEAFAKLGLDYVYLAFEV--GDKELKDVVQGFRA-MNLRGWNVSMPNKTNI--HKYLDKLSPAA 115 (315)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHHTCCEEEEEEEC--CHHHHHHHHHHHHH-TTCCEEEECTTSTTTG--GGGCSEECHHH
T ss_pred EEC-CCccccccHHHHHHHHHHcCCCcEEEEEec--CHHHHHHHHHHHhc-CCCCEEEEcCCChHHH--HHHHHhcCHHH
Confidence 446 8999999999998 9999999999999965 68999999999998 6999999999999855 889999999 6
Q ss_pred cccccccc-ce-ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024306 93 KDVDGFHP-LN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (269)
Q Consensus 93 kdvdg~~~-~n-~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~ 169 (269)
+.+.+++- ++ .|++. |+|| |+.|+++.|++.+++++||+++|+|+||+ |++++..|+++|+ +|++++|+
T Consensus 116 ~~iGAVNTi~~~~g~l~-G~NT------D~~Gf~~~L~~~~~~l~gk~~lVlGaGG~-g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 116 ELVGAVNTVVNDDGVLT-GHIT------DGTGYMRALKEAGHDIIGKKMTICGAGGA-ATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp HHHTCCSEEEEETTEEE-EECC------HHHHHHHHHHHTTCCCTTSEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECS
T ss_pred HHhCccceEEecCCEEE-EeCC------CHHHHHHHHHHcCCCccCCEEEEECCChH-HHHHHHHHHHCCCCEEEEEECC
Confidence 88777632 33 35565 6655 56999999999999999999999999998 9999999999998 89999998
Q ss_pred CC-----------------------------CHhhhcCCCCEEEeccCC---CC----cc-cCCCcCCCcEEEEeeecCC
Q 024306 170 TK-----------------------------NPEQITSEADIVIAAAGV---AN----LV-RGSWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 170 t~-----------------------------~l~~~~~~aDiVIsAtg~---p~----~i-~~~~~~~g~vViDv~~~~~ 212 (269)
.+ ++.+.+.++|+|||+|+. |+ ++ +.++++++.+|+|+.|+|.
T Consensus 188 ~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~ 267 (315)
T 3tnl_A 188 DDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPT 267 (315)
T ss_dssp STTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSS
T ss_pred CchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCC
Confidence 21 022345689999999973 33 35 6778999999999999999
Q ss_pred CCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 213 DDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 213 ~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
+| +|+ ..++++|+. +.+|.+ ||++|++++||+|+|..
T Consensus 268 ~T-------~ll------~~A~~~G~~--~~~Gl~-----MLv~Qa~~af~lwtG~~ 304 (315)
T 3tnl_A 268 KT-------RLL------EIAEEQGCQ--TLNGLG-----MMLWQGAKAFEIWTHKE 304 (315)
T ss_dssp SC-------HHH------HHHHHTTCE--EECSHH-----HHHHHHHHHHHHHHSSC
T ss_pred CC-------HHH------HHHHHCCCe--EeCcHH-----HHHHHHHHHHHHHhCCC
Confidence 88 688 447888984 477785 99999999999999963
No 13
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=100.00 E-value=1.1e-36 Score=273.46 Aligned_cols=220 Identities=15% Similarity=0.141 Sum_probs=183.4
Q ss_pred eCCCcchHHHHHH-HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 024306 16 VGERRDSQTYVRN-KIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 93 (269)
Q Consensus 16 vg~~~~s~~y~~~-~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~k 93 (269)
+| +|.+|||++. |+++|+++|+++.|..|+. ++++|.+.|+.++. ++++|+|||+|||+++ .++++.++| .+
T Consensus 7 iG-~pi~hS~Sp~~h~~~~~~~g~~~~y~~~~~--~~~~l~~~i~~l~~-~~~~G~nVT~P~K~~~--~~~ld~~~~~A~ 80 (271)
T 1nyt_A 7 FG-NPIAHSKSPFIHQQFAQQLNIEHPYGRVLA--PINDFINTLNAFFS-AGGKGANVTVPFKEEA--FARADELTERAA 80 (271)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHHTCCCCEEEEEC--CTTCHHHHHHHHHH-TTCCEEEECTTCHHHH--HHHCSEECHHHH
T ss_pred EC-CCcccccCHHHHHHHHHHCCCCcEEEEEEc--CHHHHHHHHHHHHh-CCCCeEEEccCCHHHH--HHHHhhcCHHHH
Confidence 45 8999999995 5559999999999999965 57899999999995 7999999999999866 888999999 59
Q ss_pred cccccccc---eecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 94 DVDGFHPL---NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 94 dvdg~~~~---n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
++++++.+ +.|++. |+| ||+.|+++.|++++.+++||+++|+|+|++ |++++..|.+.|++|++++|+.
T Consensus 81 ~igavNti~~~~~g~l~-G~n------tD~~G~~~~L~~~~~~l~~k~vlViGaGg~-g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 81 LAGAVNTLMRLEDGRLL-GDN------TDGVGLLSDLERLSFIRPGLRILLIGAGGA-SRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp HHTCCSEEEECTTSCEE-EEC------CHHHHHHHHHHHHTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSH
T ss_pred HhCCceEEEEcCCCeEE-EeC------CCHHHHHHHHHhcCcCcCCCEEEEECCcHH-HHHHHHHHHHcCCEEEEEECCH
Confidence 99998654 467775 654 467999999999999999999999999986 9999999999999999999874
Q ss_pred CC---Hhh--------------hc--CCCCEEEeccCCCCc-----ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecc
Q 024306 171 KN---PEQ--------------IT--SEADIVIAAAGVANL-----VRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGD 226 (269)
Q Consensus 171 ~~---l~~--------------~~--~~aDiVIsAtg~p~~-----i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GD 226 (269)
.. +.+ .+ .++|+||++||.+.. ++.++++++.+|+|+.|+|.+| ++.
T Consensus 153 ~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~t-------~~~-- 223 (271)
T 1nyt_A 153 SRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKT-------PFL-- 223 (271)
T ss_dssp HHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCC-------HHH--
T ss_pred HHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeccCCcCC-------HHH--
Confidence 21 111 12 379999999996432 6777889999999999999776 555
Q ss_pred cchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 227 VCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 227 vd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
..++++++ +|+.+|+ .||++|.+++|++|+|.
T Consensus 224 ----~~a~~~G~-~~~~~G~-----~mLv~Q~~~af~~w~g~ 255 (271)
T 1nyt_A 224 ----AWCEQRGS-KRNADGL-----GMLVAQAAHAFLLWHGV 255 (271)
T ss_dssp ----HHHHHTTC-CEEECTH-----HHHHHHHHHHHHHHHSS
T ss_pred ----HHHHHcCC-CeecCCH-----HHHHHHHHHHHHHHhCC
Confidence 44777887 3357777 59999999999999985
No 14
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=100.00 E-value=3.8e-35 Score=265.54 Aligned_cols=223 Identities=17% Similarity=0.188 Sum_probs=184.1
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCC---CCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCC
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFAD---GCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVS 90 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~---~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~ 90 (269)
.+| +|.+||.++.+++ +|+++|+++.|..|+. .+++++|.+.++.++. +++.|+|||+|||+.+ .++++.++
T Consensus 9 viG-~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~~~~~~v~~~~l~~~~~~~~~-~~~~G~nVTiP~K~~v--~~~lD~l~ 84 (283)
T 3jyo_A 9 LIG-QGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALY-LGFNGLNITHPYKQAV--LPLLDEVS 84 (283)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEETTSTTTTTCCHHHHHHHHHH-TTCCEEEECTTCTTTT--GGGSSEEC
T ss_pred EEC-CCccccccHHHHHHHHHHcCCCeEEEEEEccccCCCHHHHHHHHHHHhh-CCCCEEEECcccHHHH--HHHhhhCC
Confidence 345 8999999999888 8999999999999954 2456789999999987 6899999999999966 88999999
Q ss_pred c-cccccccc-cce--ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEE
Q 024306 91 L-EKDVDGFH-PLN--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSI 165 (269)
Q Consensus 91 p-~kdvdg~~-~~n--~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti 165 (269)
| .+.+.+++ .++ .|++. |+|| |..|+++.|++.+.+++||+++|+|+||+ |++++..|.+.|+ +|++
T Consensus 85 ~~A~~iGAVNTv~~~~~g~l~-G~NT------D~~G~~~~l~~~~~~l~~k~vlVlGaGG~-g~aia~~L~~~G~~~v~i 156 (283)
T 3jyo_A 85 EQATQLGAVNTVVIDATGHTT-GHNT------DVSGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQV 156 (283)
T ss_dssp HHHHHHTCCCEEEECTTSCEE-EECH------HHHHHHHHHHHHCTTCCCSEEEEECCSHH-HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhCcceEEEECCCCeEE-EecC------CHHHHHHHHHHhCcCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEE
Confidence 9 66655542 222 24454 6555 66999999999999999999999999998 9999999999998 7999
Q ss_pred EeCCCC------------------------CHhhhcCCCCEEEeccCC---CC---cccCCCcCCCcEEEEeeecCCCCC
Q 024306 166 VHALTK------------------------NPEQITSEADIVIAAAGV---AN---LVRGSWLKPGAVVLDVGTCPVDDP 215 (269)
Q Consensus 166 ~~~~t~------------------------~l~~~~~~aDiVIsAtg~---p~---~i~~~~~~~g~vViDv~~~~~~~~ 215 (269)
++|+.. ++.+.++++|+|||+|+. |+ .++.++++++.+|+|+.|+|.+|
T Consensus 157 ~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~T- 235 (283)
T 3jyo_A 157 ADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIET- 235 (283)
T ss_dssp ECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCCSSSSC-
T ss_pred EECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecCCCCCC-
Confidence 998721 344556789999999973 32 36788899999999999999988
Q ss_pred CCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 216 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 216 ~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
+|+ ..+++.|+ ++.+|.+ ||++|++++||+|+|..
T Consensus 236 ------~ll------~~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~~ 270 (283)
T 3jyo_A 236 ------ELL------KAARALGC--ETLDGTR-----MAIHQAVDAFRLFTGLE 270 (283)
T ss_dssp ------HHH------HHHHHHTC--CEECTHH-----HHHHHHHHHHHHHHSCC
T ss_pred ------HHH------HHHHHCcC--eEeCcHH-----HHHHHHHHHHHHHcCCC
Confidence 687 44778888 4477785 99999999999999963
No 15
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=100.00 E-value=8.4e-36 Score=267.87 Aligned_cols=220 Identities=15% Similarity=0.111 Sum_probs=183.6
Q ss_pred eCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 024306 16 VGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 93 (269)
Q Consensus 16 vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~k 93 (269)
+| +|.+||.++.+++ +|+++|+++.|..|+. ++++|.+.++.++. ++++|+|||+|||+++ .++++.++| .|
T Consensus 7 iG-~pi~hS~SP~~hn~~~~~~gl~~~y~~~~~--~~~~l~~~i~~~~~-~~~~G~nVT~P~K~~v--~~~ld~~~~~A~ 80 (272)
T 1p77_A 7 WG-NPIAQSKSPLIQNKLAAQTHQTMEYIAKLG--DLDAFEQQLLAFFE-EGAKGCNITSPFKERA--YQLADEYSQRAK 80 (272)
T ss_dssp EE-SSCTTCCHHHHHHHHHHHTTCCEEEEEEEC--CTTTHHHHHHHHHH-TTCCEEEECTTCHHHH--HHHCSEECHHHH
T ss_pred EC-CCcccccCHHHHHHHHHHCCcCeEEEEEEc--CHHHHHHHHHHHHh-CCCCEEEECcCCHHHH--HHHHhhcCHHHH
Confidence 45 8999999998887 9999999999999965 57899999999995 7999999999999866 889999999 59
Q ss_pred cccccccc---eecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 94 DVDGFHPL---NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 94 dvdg~~~~---n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
++++++.+ +.|++. |+|+ |+.|+++.|++++.++++|+++|+|+|++ |++++..|.+.|++|++++|+.
T Consensus 81 ~igavNti~~~~~g~l~-g~NT------D~~G~~~~L~~~~~~~~~~~vlvlGaGg~-g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 81 LAEACNTLKKLDDGKLY-ADNT------DGIGLVTDLQRLNWLRPNQHVLILGAGGA-TKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp HHTCCSEEEECTTSCEE-EECC------HHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHTTHHHHHHTTCEEEEEESSH
T ss_pred HhCCceEEEEccCCEEE-EecC------CHHHHHHHHHHhCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCH
Confidence 99998655 567776 7665 56999999999999999999999999997 9999999999999999999974
Q ss_pred C---CHh--------------hhc-C-CCCEEEeccCCCCc-----ccCCCcCCCcEEEEeeecCCC-CCCCCCCceeec
Q 024306 171 K---NPE--------------QIT-S-EADIVIAAAGVANL-----VRGSWLKPGAVVLDVGTCPVD-DPSCEYGYRLMG 225 (269)
Q Consensus 171 ~---~l~--------------~~~-~-~aDiVIsAtg~p~~-----i~~~~~~~g~vViDv~~~~~~-~~~~~~~~~l~G 225 (269)
. .+. +.+ + ++|+||++||.+.. ++.++++++.+|+|+.|+|.+ | ++.
T Consensus 153 ~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~~t-------~ll- 224 (272)
T 1p77_A 153 SKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDT-------PFI- 224 (272)
T ss_dssp HHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCC-------HHH-
T ss_pred HHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeCCCCcCC-------HHH-
Confidence 2 111 123 3 79999999995432 555678889999999999976 6 555
Q ss_pred ccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 226 DVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 226 Dvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
..++++|+.|+++ |. .||++|++.+|++|+|.
T Consensus 225 -----~~a~~~G~~~~v~-G~-----~mLv~Qa~~af~~w~g~ 256 (272)
T 1p77_A 225 -----ALCKSLGLTNVSD-GF-----GMLVAQAAHSFHLWRGV 256 (272)
T ss_dssp -----HHHHHTTCCCEEC-SH-----HHHHHHHHHHHHHHHSC
T ss_pred -----HHHHHcCCCEeeC-CH-----HHHHHHHHHHHHHHhCC
Confidence 4477788864566 45 59999999999999985
No 16
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=100.00 E-value=3.3e-35 Score=265.20 Aligned_cols=220 Identities=15% Similarity=0.172 Sum_probs=181.4
Q ss_pred eCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 024306 16 VGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 93 (269)
Q Consensus 16 vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~k 93 (269)
+| +|.+||.++.+++ +|+++|+++.|..|+. ++++|.+.++.++. +++.|+|||+|||+.+ .++++.++| .+
T Consensus 6 iG-~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVTiP~K~~v--~~~~d~l~~~A~ 79 (277)
T 3don_A 6 IG-NPISHSLSPLMHHANFQSLNLENTYEAINV--PVNQFQDIKKIISE-KSIDGFNVTIPHKERI--IPYLDDINEQAK 79 (277)
T ss_dssp EE-SSCTTCCHHHHHHHHHHHTTCCCEEEEEEC--CGGGGGGHHHHHHH-TTCSEEEECTTCTTTT--GGGCSEECHHHH
T ss_pred EC-CCccccccHHHHHHHHHHcCcCcEEEEEEc--CHHHHHHHHHHHhh-CCCCEEEECcCCHHHH--HHHhhhCCHHHH
Confidence 35 8999999999888 8999999999999965 57789999999987 5899999999999966 888999988 55
Q ss_pred cccccc-cce-ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC
Q 024306 94 DVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT 170 (269)
Q Consensus 94 dvdg~~-~~n-~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t 170 (269)
.+.+++ .++ .|++. |+|| |..|+++.|++.+.+++||+++|+|+||+ |++++..|.+.|+ +|++++|+.
T Consensus 80 ~iGAVNTv~~~~g~l~-G~NT------D~~G~~~~L~~~~~~l~~k~vlvlGaGg~-g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 80 SVGAVNTVLVKDGKWI-GYNT------DGIGYVNGLKQIYEGIEDAYILILGAGGA-SKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp HHTCCCEEEEETTEEE-EECC------HHHHHHHHHHHHSTTGGGCCEEEECCSHH-HHHHHHHHHTTCCSCCEEECSCG
T ss_pred HhCceeEEEecCCEEE-EECC------hHHHHHHHHHHhCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCH
Confidence 555442 222 34554 6555 66999999999999999999999999998 9999999999998 899999874
Q ss_pred C---------------CHhhhcCCCCEEEeccCC---CC---cccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccch
Q 024306 171 K---------------NPEQITSEADIVIAAAGV---AN---LVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCY 229 (269)
Q Consensus 171 ~---------------~l~~~~~~aDiVIsAtg~---p~---~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~ 229 (269)
. ++.+.++++|+|||+|+. |+ .++.++++++.+|+|+.|+|.+| +|+
T Consensus 152 ~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~T-------~ll----- 219 (277)
T 3don_A 152 SRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKT-------PIL----- 219 (277)
T ss_dssp GGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CCSSCCTTCCSSCEEEESCCSSSSC-------HHH-----
T ss_pred HHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCCC-------HHH-----
Confidence 2 233457889999999984 32 35778899999999999999877 676
Q ss_pred HHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 230 EEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 230 ~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
..+++.|+ ++.+|.+ ||++|++.+||+|+|.+
T Consensus 220 -~~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~~ 251 (277)
T 3don_A 220 -IEAEQRGN--PIYNGLD-----MFVHQGAESFKIWTNLE 251 (277)
T ss_dssp -HHHHHTTC--CEECTHH-----HHHHHHHHHHHHHHSSC
T ss_pred -HHHHHCcC--EEeCCHH-----HHHHHHHHHHHHHcCCC
Confidence 44778887 4467785 99999999999999963
No 17
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=100.00 E-value=8.1e-35 Score=264.88 Aligned_cols=219 Identities=20% Similarity=0.242 Sum_probs=185.4
Q ss_pred eCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 024306 16 VGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 93 (269)
Q Consensus 16 vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~k 93 (269)
+| +|.+|||++.+++ +|+++|+++.|..|+. ++++|.++++.++. +++.|+|||+|+|+++ ..+++.++| .+
T Consensus 29 iG-~pi~hS~Sp~~hn~~~~~~Gl~~~Y~~~~~--~~~~l~~~v~~l~~-~~~~G~nVTiP~K~~i--~~~ld~~~~~A~ 102 (297)
T 2egg_A 29 IG-FPVEHSLSPLMHNDAFARLGIPARYHLFSV--EPGQVGAAIAGVRA-LGIAGVNVTIPHKLAV--IPFLDEVDEHAR 102 (297)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEEC--CTTCHHHHHHHHHH-HTCCEEEECTTCTTTT--GGGCSEECHHHH
T ss_pred EC-CCcccccCHHHHHHHHHHcCcCcEEEEEEc--CHHHHHHHHHHHhh-CCCCeEEECCcCHHHH--HHHHHHHhHHHH
Confidence 45 8999999999995 9999999999999965 57889999999996 6899999999999987 889999999 69
Q ss_pred cccccccc--eecccccCCCCCccccCCHHHHHHHHHHhC-CCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024306 94 DVDGFHPL--NIGNLAMRGREPLFIPCTPKGCIELLIRSG-VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (269)
Q Consensus 94 dvdg~~~~--n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~-~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~ 169 (269)
++++++.+ +.|++. |+|| |..|+++.|++++ +++++++++|+|+|++ |++++..|.+.|+ +|++++|+
T Consensus 103 ~iGavNti~~~~g~l~-g~nT------d~~G~~~~l~~~~~~~l~~~~vlVlGaGg~-g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 103 RIGAVNTIINNDGRLV-GYNT------DGLGYVQALEEEMNITLDGKRILVIGAGGG-ARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp HHTCCCEEEEETTEEE-EECC------HHHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHTTTCSEEEEECSS
T ss_pred HhCCCCeEECcCCeEe-eccC------CHHHHHHHHHHhCCCCCCCCEEEEECcHHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence 99998655 577776 6666 5599999999988 8999999999999997 9999999999998 89999987
Q ss_pred CC--------------------CHhhhcCCCCEEEeccCCCC-------cccCCCcCCCcEEEEeeecCCCCCCCCCCce
Q 024306 170 TK--------------------NPEQITSEADIVIAAAGVAN-------LVRGSWLKPGAVVLDVGTCPVDDPSCEYGYR 222 (269)
Q Consensus 170 t~--------------------~l~~~~~~aDiVIsAtg~p~-------~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~ 222 (269)
.. ++.+.+.++|+||++||.+. +++.++++++.+|+|+.|+|.+| +
T Consensus 175 ~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~T-------~ 247 (297)
T 2egg_A 175 VEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLET-------K 247 (297)
T ss_dssp HHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSSC-------H
T ss_pred HHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCCC-------H
Confidence 31 23345678999999998532 35677899999999999999877 6
Q ss_pred eecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 223 LMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 223 l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
|+ ..++++|+. .++ |+ .||++|++++|++|+|.
T Consensus 248 ll------~~A~~~G~~-~v~-Gl-----~MLv~Qa~~af~~w~g~ 280 (297)
T 2egg_A 248 WL------KEAKARGAR-VQN-GV-----GMLVYQGALAFEKWTGQ 280 (297)
T ss_dssp HH------HHHHHTTCE-EEC-SH-----HHHHHHHHHHHHHHHSC
T ss_pred HH------HHHHHCcCE-EEC-CH-----HHHHHHHHHHHHHHhCC
Confidence 66 446777873 354 55 59999999999999986
No 18
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=100.00 E-value=5.6e-35 Score=264.15 Aligned_cols=219 Identities=16% Similarity=0.216 Sum_probs=183.0
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+|||++.+++ +|+++|+++.|..|+. ++++|.+.|+.++++ +++|+|||+|||+++ ..+++.+++ .
T Consensus 16 viG-~pi~hS~Sp~~h~~~~~~~gi~~~y~~~~~--~~~~l~~~i~~l~~~-~~~G~nVtiP~k~~i--~~~~d~~~~~a 89 (287)
T 1nvt_A 16 LIG-HPVEHSFSPIMHNAAFKDKGLNYVYVAFDV--LPENLKYVIDGAKAL-GIVGFNVTIPHKIEI--MKYLDEIDKDA 89 (287)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEEC--CGGGGGGHHHHHHHH-TCCEEEECTTSTTGG--GGGCSEECHHH
T ss_pred EEC-CCcccccCHHHHHHHHHHcCCCcEEEEEEc--CHHHHHHHHHHHHhC-CCCEEEEccCCHHHH--HHHHHhcCHHH
Confidence 446 9999999999955 9999999999999954 689999999999974 899999999999977 778888889 6
Q ss_pred ccccccccc--eecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 93 KDVDGFHPL--NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 93 kdvdg~~~~--n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++++++.+ +.|++. |+|+ |+.|+++.|++++++++||+++|+|+||+ |++++..|+++| +|++++|+.
T Consensus 90 ~~igavnt~~~~~g~l~-g~nT------d~~G~~~~L~~~~~~l~~k~vlV~GaGgi-G~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 90 QLIGAVNTIKIEDGKAI-GYNT------DGIGARMALEEEIGRVKDKNIVIYGAGGA-ARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp HHHTCCCEEEEETTEEE-EECC------HHHHHHHHHHHHHCCCCSCEEEEECCSHH-HHHHHHHHTSSS-EEEEECSSH
T ss_pred HHhCceeeEEeeCCEEE-EecC------CHHHHHHHHHHhCCCcCCCEEEEECchHH-HHHHHHHHHHCC-CEEEEECCH
Confidence 888887544 366666 6544 78999999999999999999999999976 999999999999 999999874
Q ss_pred CC---H---------------------hhhcCCCCEEEeccCCCC-------cc-cCCCcCCCcEEEEeeecCCCCCCCC
Q 024306 171 KN---P---------------------EQITSEADIVIAAAGVAN-------LV-RGSWLKPGAVVLDVGTCPVDDPSCE 218 (269)
Q Consensus 171 ~~---l---------------------~~~~~~aDiVIsAtg~p~-------~i-~~~~~~~g~vViDv~~~~~~~~~~~ 218 (269)
.. + .+.+.++|+||+++|... ++ +.++++++.+|+|++|+|.+|
T Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p~~t---- 236 (287)
T 1nvt_A 161 EKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLET---- 236 (287)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSSC----
T ss_pred HHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCCccC----
Confidence 21 1 234567999999998532 25 678899999999999998766
Q ss_pred CCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 219 YGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 219 ~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
+++ ..++++++. +.+|+ .||++|++++|++|+|.
T Consensus 237 ---~ll------~~a~~~G~~--~~~Gl-----~mL~~Qa~~af~~w~g~ 270 (287)
T 1nvt_A 237 ---VLL------KEAKKVNAK--TINGL-----GMLIYQGAVAFKIWTGV 270 (287)
T ss_dssp ---HHH------HHHHTTTCE--EECTH-----HHHHHHHHHHHHHHHSS
T ss_pred ---HHH------HHHHHCCCE--EeCcH-----HHHHHHHHHHHHHHhCC
Confidence 666 346677874 46677 49999999999999985
No 19
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=100.00 E-value=8.7e-35 Score=261.80 Aligned_cols=221 Identities=13% Similarity=0.102 Sum_probs=178.1
Q ss_pred eCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 024306 16 VGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 93 (269)
Q Consensus 16 vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~k 93 (269)
+| +|.+||.++.+++ +|+++|+++.|..|+. ++++|.+.++.+.+ +++.|+|||+|||+.+ .++++.++| .+
T Consensus 8 iG-~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVTiP~K~~v--~~~~d~l~~~A~ 81 (272)
T 3pwz_A 8 IG-RPINHTKSPLIHGLFAQASNQQLEYGAIEG--SLDDFEAQVLQFRS-EGGKGMNITAPFKLRA--FELADRRSERAQ 81 (272)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEEC--CTTTHHHHHHHHHH-TTCCEEEECTTCHHHH--HHHCSEECHHHH
T ss_pred EC-CCcCCcccHHHHHHHHHHcCCCcEEEEEEc--CHHHHHHHHHHHhh-CCCCEEEECchhHHHH--HHHHhhCCHHHH
Confidence 35 8999999999888 8999999999999966 46789999999987 6899999999999844 778888888 55
Q ss_pred cccccc-cce-ecccccCCCCCccccCCHHHHHHH-HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024306 94 DVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIEL-LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (269)
Q Consensus 94 dvdg~~-~~n-~g~l~~g~~~~~~~p~t~~g~~~~-l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~ 169 (269)
.+.+++ .++ .|++. |+|| |..|+++. |++.+.+++||+++|+|+||+ |++++..|.+.|+ +|++++|+
T Consensus 82 ~iGAvNTv~~~~g~l~-G~NT------D~~G~~~~lL~~~~~~l~~k~~lvlGaGg~-~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 82 LARAANALKFEDGRIV-AENF------DGIGLLRDIEENLGEPLRNRRVLLLGAGGA-VRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp HHTCCSEEEEETTEEE-EECC------HHHHHHHHHHTTSCCCCTTSEEEEECCSHH-HHHHHHHHHHTCCSEEEEECSC
T ss_pred HhCccceEEccCCeEE-EecC------CHHHHHHHHHHHcCCCccCCEEEEECccHH-HHHHHHHHHHcCCCEEEEEeCC
Confidence 554432 222 34454 5555 66999997 988889999999999999998 9999999999996 89999987
Q ss_pred CCC---H--------------hhhc-CCCCEEEeccCCC---C--cccCCCcCCCcEEEEeeecCCCCCCCCCCceeecc
Q 024306 170 TKN---P--------------EQIT-SEADIVIAAAGVA---N--LVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGD 226 (269)
Q Consensus 170 t~~---l--------------~~~~-~~aDiVIsAtg~p---~--~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GD 226 (269)
... + .+.- .++|+|||+|+.. + .++.++++++.+|+|+.|+|.+| +|+
T Consensus 154 ~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T-------~ll-- 224 (272)
T 3pwz_A 154 MAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLT-------PFL-- 224 (272)
T ss_dssp HHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCSC-------HHH--
T ss_pred HHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCCC-------HHH--
Confidence 421 1 1111 6799999999842 2 46788999999999999999888 677
Q ss_pred cchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 227 VCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 227 vd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
..+++.|+.. +.+|.+ ||++|++++||+|+|..
T Consensus 225 ----~~A~~~G~~~-~~~Gl~-----ML~~Qa~~~f~lwtg~~ 257 (272)
T 3pwz_A 225 ----RLAREQGQAR-LADGVG-----MLVEQAAEAFAWWRGVR 257 (272)
T ss_dssp ----HHHHHHSCCE-EECTHH-----HHHHHHHHHHHHHHSCC
T ss_pred ----HHHHHCCCCE-EECCHH-----HHHHHHHHHHHHHhCCC
Confidence 4477788741 467775 99999999999999963
No 20
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=100.00 E-value=1.5e-34 Score=264.87 Aligned_cols=220 Identities=18% Similarity=0.209 Sum_probs=179.2
Q ss_pred eCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 024306 16 VGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 93 (269)
Q Consensus 16 vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~k 93 (269)
+| +|.+||.++.+++ +|+++|+++.|..|+. ++++|.+.++.+.. .++.|+|||+|||+.+ .++++.++| ++
T Consensus 37 iG-~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVTiP~K~~v--~~~lD~ls~~A~ 110 (312)
T 3t4e_A 37 MA-YPIRHSLSPEMQNKALEKAGLPYTYMAFEV--DNTTFASAIEGLKA-LKMRGTGVSMPNKQLA--CEYVDELTPAAK 110 (312)
T ss_dssp EE-SCCTTCSHHHHHHHHHHHHTCSEEEEEEEC--CTTTHHHHHHHHHH-TTCCEEEECTTSHHHH--GGGCSEECHHHH
T ss_pred EC-CCccccccHHHHHHHHHHcCCCcEEEeEec--CHHHHHHHHHHHhh-CCCCEEEECchhHHHH--HHHhhhcCHHHH
Confidence 45 8999999999888 9999999999999965 46789999999987 5899999999999743 677777777 55
Q ss_pred cccccc-cce-ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC
Q 024306 94 DVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT 170 (269)
Q Consensus 94 dvdg~~-~~n-~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t 170 (269)
.+.+++ .++ .|++. |+|| |..|+++.|++.+++++||+++|+|+||+ |++++..|.+.|+ +|+|++|+.
T Consensus 111 ~iGAVNTi~~~~g~l~-G~NT------D~~Gf~~~L~~~~~~l~gk~~lVlGAGGa-araia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 111 LVGAINTIVNDDGYLR-GYNT------DGTGHIRAIKESGFDMRGKTMVLLGAGGA-ATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp HHTCCSEEEEETTEEE-EECH------HHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEEECSS
T ss_pred HhCceeEEEecCCEEE-EeCC------cHHHHHHHHHhcCCCcCCCEEEEECcCHH-HHHHHHHHHHcCCCEEEEEECCC
Confidence 555442 222 34554 6655 56999999999999999999999999998 9999999999998 799999982
Q ss_pred C--------------------------CH---hhhcCCCCEEEeccCC---CC---cc--cCCCcCCCcEEEEeeecCCC
Q 024306 171 K--------------------------NP---EQITSEADIVIAAAGV---AN---LV--RGSWLKPGAVVLDVGTCPVD 213 (269)
Q Consensus 171 ~--------------------------~l---~~~~~~aDiVIsAtg~---p~---~i--~~~~~~~g~vViDv~~~~~~ 213 (269)
+ ++ .+.+.++|+|||+|+. |. .+ +.++++++.+|+|+.|+|.+
T Consensus 183 ~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~ 262 (312)
T 3t4e_A 183 DFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHM 262 (312)
T ss_dssp THHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSS
T ss_pred chHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCC
Confidence 1 11 2345679999999983 22 22 55789999999999999998
Q ss_pred CCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 214 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 214 ~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
| +|+ ..+++.|+. +.+|.+ ||++|++++||+|+|..
T Consensus 263 T-------~ll------~~A~~~G~~--~~~Gl~-----MLv~Qa~~af~lwtg~~ 298 (312)
T 3t4e_A 263 T-------KLL------QQAQQAGCK--TIDGYG-----MLLWQGAEQFELWTGKA 298 (312)
T ss_dssp C-------HHH------HHHHHTTCE--EECHHH-----HHHHHHHHHHHHHHSSC
T ss_pred C-------HHH------HHHHHCCCe--EECcHH-----HHHHHHHHHHHHHhCCC
Confidence 8 788 447888984 477885 99999999999999963
No 21
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=100.00 E-value=1.8e-34 Score=260.95 Aligned_cols=222 Identities=14% Similarity=0.140 Sum_probs=179.4
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+||.++.+++ +|+++|+++.|..|+. ++++|.+.++.+.. +++.|+|||+|||+.+ .++++.++| .
T Consensus 13 viG-~Pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVTiP~K~~v--~~~ld~l~~~A 86 (281)
T 3o8q_A 13 VFG-NPINHSKSPFIHTLFARQTQQSMIYTAQCV--PVDGFTEAAKHFFA-QGGRGCNVTVPFKEEA--YRFADRLTERA 86 (281)
T ss_dssp EEC-CSSSCCCHHHHHHHHHHHTTCCEEEEEECC--CTTCHHHHHHHHHH-TTCCEEEECTTSHHHH--HHHCSEECHHH
T ss_pred EEC-CCCCccCcHHHHHHHHHHcCCCcEEEEeec--CHHHHHHHHHHHHh-CCCCEEEECCccHHHH--HHHHhhcCHHH
Confidence 346 8999999999998 8999999999999965 46789999999986 6899999999999844 778888888 5
Q ss_pred ccccccc-cce--ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024306 93 KDVDGFH-PLN--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (269)
Q Consensus 93 kdvdg~~-~~n--~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~ 168 (269)
+.+.+++ .++ .|++. |+|| |..|+++.|++.+.+++||+++|+|+||+ |++++..|.+.|+ +|++++|
T Consensus 87 ~~iGAVNTv~~~~~g~l~-G~NT------D~~G~~~~L~~~~~~l~~k~vlvlGaGg~-g~aia~~L~~~G~~~v~v~~R 158 (281)
T 3o8q_A 87 RLAGAVNTLKKLDDGEIL-GDNT------DGEGLVQDLLAQQVLLKGATILLIGAGGA-ARGVLKPLLDQQPASITVTNR 158 (281)
T ss_dssp HHHTCCSEEEECTTSCEE-EECC------HHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHTTCCSEEEEEES
T ss_pred HhhCeeeEEEEcCCCcEE-EEec------HHHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHhcCCCeEEEEEC
Confidence 5555542 221 24454 5555 66999999999999999999999999997 9999999999996 8999999
Q ss_pred CCCC---H---------------hhhcCCCCEEEeccCCC-----CcccCCCcCCCcEEEEeeecCCCCCCCCCCceeec
Q 024306 169 LTKN---P---------------EQITSEADIVIAAAGVA-----NLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMG 225 (269)
Q Consensus 169 ~t~~---l---------------~~~~~~aDiVIsAtg~p-----~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~G 225 (269)
+... + .+...++|+|||+|+.. ..++.++++++.+|+|+.|+|.+| +|+
T Consensus 159 ~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~T-------~ll- 230 (281)
T 3o8q_A 159 TFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYT-------VFN- 230 (281)
T ss_dssp SHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSCC-------HHH-
T ss_pred CHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCccC-------HHH-
Confidence 7421 1 11226799999999853 146778899999999999999888 677
Q ss_pred ccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 226 DVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 226 Dvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
..+++.|+.. +.+|.+ ||++|++++||+|+|..
T Consensus 231 -----~~A~~~G~~~-~~~Gl~-----Mlv~Qa~~~f~lwtg~~ 263 (281)
T 3o8q_A 231 -----QWARQHGCAQ-AIDGLG-----MLVGQAAESFMLWRGLR 263 (281)
T ss_dssp -----HHHHHTTCSE-EECTHH-----HHHHHHHHHHHHHHSCC
T ss_pred -----HHHHHCCCCE-EECcHH-----HHHHHHHHHHHHHhCCC
Confidence 3477788741 467775 99999999999999963
No 22
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=100.00 E-value=2e-34 Score=259.03 Aligned_cols=221 Identities=19% Similarity=0.210 Sum_probs=176.1
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+||.++.+++ +|+++|+++.|..|+. .++++.+.++.+++.+++.|+|||+|||+.+ .++++.++| .
T Consensus 11 viG-~PI~HS~SP~ihn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~l~~~~~~~G~nVTiP~K~~~--~~~lD~ls~~A 85 (269)
T 3tum_A 11 IVG-SPIAQVKSPQNFNTWFNHNNCNLAMLPIDL--HEAALDSFADTLRGWQNLRGCVVTVPYKQAL--ANRVDGLSERA 85 (269)
T ss_dssp EEE-SSCTTCCHHHHHHHHHHHTTCSEEEEEEEB--CGGGHHHHHHHHHHBTTEEEEEECTTCHHHH--HTTSSEECHHH
T ss_pred EEC-CCcchhhhHHHHHHHHHHcCCCeEEEEeec--CHhhHHHHHHHHHhccCCCeeEeccccHHHH--HHHhccCCHHH
Confidence 346 8999999998887 8999999999999965 5778888888888877899999999999733 667777777 5
Q ss_pred cccccc-ccce--ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024306 93 KDVDGF-HPLN--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (269)
Q Consensus 93 kdvdg~-~~~n--~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~ 168 (269)
+.+.++ |.++ .|++. |+|| |..|+++.|++.+.++++|+++|+|+||+ +|+++..|.+.|+ +|+|++|
T Consensus 86 ~~iGAVNTi~~~~dG~l~-G~NT------D~~Gf~~~L~~~g~~~~~~~~lilGaGGa-arai~~aL~~~g~~~i~i~nR 157 (269)
T 3tum_A 86 AALGSINVIRRERDGRLL-GDNV------DGAGFLGAAHKHGFEPAGKRALVIGCGGV-GSAIAYALAEAGIASITLCDP 157 (269)
T ss_dssp HHHTCCSEEEECTTSCEE-EECC------HHHHHHHHHHHTTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCSEEEEECS
T ss_pred HHcCceeEEEECCCCEEE-EEEc------ChHHHHHHHHHhCCCcccCeEEEEecHHH-HHHHHHHHHHhCCCeEEEeCC
Confidence 555544 2222 24554 5555 66999999999999999999999999999 9999999999996 7999998
Q ss_pred CCCC-------------------HhhhcCCCCEEEeccCC---CC---cccC---CCcCCCcEEEEeeecCCCCCCCCCC
Q 024306 169 LTKN-------------------PEQITSEADIVIAAAGV---AN---LVRG---SWLKPGAVVLDVGTCPVDDPSCEYG 220 (269)
Q Consensus 169 ~t~~-------------------l~~~~~~aDiVIsAtg~---p~---~i~~---~~~~~g~vViDv~~~~~~~~~~~~~ 220 (269)
+... ..+.+.++|+|||+|+. ++ ++++ +.++++.+|+|+.|+|.+|
T Consensus 158 t~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~vY~P~~T------ 231 (269)
T 3tum_A 158 STARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGMGTRAELPLSAALLATLQPDTLVADVVTSPEIT------ 231 (269)
T ss_dssp CHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEECCCSSSSC------
T ss_pred CHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCccccCCCCCCCCChHHHhccCCCcEEEEEccCCCCC------
Confidence 7321 11235678999999973 32 2443 3478899999999999998
Q ss_pred ceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 221 YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 221 ~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
+|+ ..+++.|+. +.+|++ ||++|. .+|++|+|++
T Consensus 232 -~ll------~~A~~~G~~--~~~Gl~-----MLv~Qa-~~f~lwtG~~ 265 (269)
T 3tum_A 232 -PLL------NRARQVGCR--IQTGPE-----MAFAQL-GHLGAFMGVT 265 (269)
T ss_dssp -HHH------HHHHHHTCE--EECHHH-----HHHHHH-HHHHHHHTSS
T ss_pred -HHH------HHHHHCcCE--EECcHH-----HHHHHH-HHHHHHHCCC
Confidence 788 447888984 477885 999995 7999999974
No 23
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.98 E-value=1.4e-32 Score=247.04 Aligned_cols=218 Identities=17% Similarity=0.261 Sum_probs=182.4
Q ss_pred EeCCCcchHHHHHHHH-HHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKI-KACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~-~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
++| +|.+|||++.++ ++|+++|+++.|..|+. ++++|.+.++.++. ++++|+|||+|+|+++ ..+++.+++ .
T Consensus 17 liG-~pi~hs~sp~~h~~~~~~~g~~~~y~~~~~--~~~~l~~~i~~l~~-~~~~G~nvtiP~k~~i--~~~ld~l~~~A 90 (275)
T 2hk9_A 17 VIG-FPVKHSLSPVFQNALIRYAGLNAVYLAFEI--NPEELKKAFEGFKA-LKVKGINVTVPFKEEI--IPLLDYVEDTA 90 (275)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHHTCSEEEEEEEC--CGGGHHHHHHHHHH-HTCCEEEECTTSTTTT--GGGCSEECHHH
T ss_pred EEC-CCcccccCHHHHHHHHHHcCCCcEEEEEEC--CHHHHHHHHHHHHh-CCCCEEEECccCHHHH--HHHHHHhhHHH
Confidence 668 999999999777 59999999999999964 68899999999997 6899999999999977 888999999 5
Q ss_pred ccccccccc--eecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 93 KDVDGFHPL--NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 93 kdvdg~~~~--n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++++++.+ +.|++. |+| +|+.|++..|++++++++|++++|||+|++ |++++..|.+.|++|++++|+.
T Consensus 91 ~~~gavnti~~~~g~~~-g~n------Td~~G~~~~l~~~~~~~~~~~v~iiGaG~~-g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 91 KEIGAVNTVKFENGKAY-GYN------TDWIGFLKSLKSLIPEVKEKSILVLGAGGA-SRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp HHHTCCCEEEEETTEEE-EEC------CHHHHHHHHHHHHCTTGGGSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSSH
T ss_pred HHhCCcceEEeeCCEEE-eec------CCHHHHHHHHHHhCCCcCCCEEEEECchHH-HHHHHHHHHHcCCEEEEEECCH
Confidence 999888655 466665 544 577999999999999999999999999997 9999999999999999999873
Q ss_pred C---------------CHhhhcCCCCEEEeccCCC------CcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccch
Q 024306 171 K---------------NPEQITSEADIVIAAAGVA------NLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCY 229 (269)
Q Consensus 171 ~---------------~l~~~~~~aDiVIsAtg~p------~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~ 229 (269)
. ++.+.++++|+||++|+.. ..++.++++++.+|+|++| ..+ +++
T Consensus 163 ~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~~~~l~~g~~viDv~~--~~t-------~ll----- 228 (275)
T 2hk9_A 163 EKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFNYDLIKKDHVVVDIIY--KET-------KLL----- 228 (275)
T ss_dssp HHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSCGGGCCTTSEEEESSS--SCC-------HHH-----
T ss_pred HHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCCHHHcCCCCEEEEcCC--ChH-------HHH-----
Confidence 1 4566778999999999853 2355677899999999999 444 565
Q ss_pred HHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 230 EEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 230 ~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
+. +++.++ +.++| ..||+.|++.+|++|+|.
T Consensus 229 ~~-a~~~g~-~~v~g------~~mlv~q~~~a~~~w~g~ 259 (275)
T 2hk9_A 229 KK-AKEKGA-KLLDG------LPMLLWQGIEAFKIWNGC 259 (275)
T ss_dssp HH-HHHTTC-EEECS------HHHHHHHHHHHHHHHHCC
T ss_pred HH-HHHCcC-EEECC------HHHHHHHHHHHHHHHHCC
Confidence 33 555665 34565 579999999999999986
No 24
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.97 E-value=7.7e-32 Score=240.25 Aligned_cols=217 Identities=18% Similarity=0.244 Sum_probs=181.4
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+|||++.+++ +|+++|+++.|..++ ++++++.+.++.++.+ ++|++||+|+|+++ ..+++.+++ .
T Consensus 6 ~~G-~pi~hs~sp~~h~~~~~~~g~~~~y~~~~--~~~~~l~~~i~~l~~~--~~G~~vt~P~k~~i--~~~~~~l~~~a 78 (263)
T 2d5c_A 6 VLG-HPVAHSLSPAMHAFALESLGLEGSYEAWD--TPLEALPGRLKEVRRA--FRGVNLTLPLKEAA--LAHLDWVSPEA 78 (263)
T ss_dssp EEE-SSCTTCSHHHHHHHHHHHTTCCEEEEEEE--CCGGGHHHHHHHHHHH--CSEEEECTTCTTGG--GGGCSEECHHH
T ss_pred EEC-CCcccccCHHHHHHHHHHcCCCCEEEEEe--CCHHHHHHHHHhcccc--CceEEEcccCHHHH--HHHHHHHhHHH
Confidence 346 8999999965555 999999999999994 4688999999999995 99999999999977 788899999 9
Q ss_pred ccccccccc--eecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 93 KDVDGFHPL--NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 93 kdvdg~~~~--n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++++++.+ +.|++. |+++ +..|++..|++++++++| +++|||+|++ |++++..|.+.|++|++++|+.
T Consensus 79 ~~~gavn~i~~~~g~~~-g~nt------d~~g~~~~l~~~~~~l~~-~v~iiG~G~~-g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 79 QRIGAVNTVLQVEGRLF-GFNT------DAPGFLEALKAGGIPLKG-PALVLGAGGA-GRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp HHHTCCCEEEEETTEEE-EECC------HHHHHHHHHHHTTCCCCS-CEEEECCSHH-HHHHHHHHHHTTCCEEEECSSH
T ss_pred HHhCCCCcEEccCCeEE-EeCC------CHHHHHHHHHHhCCCCCC-eEEEECCcHH-HHHHHHHHHHCCCEEEEEECCH
Confidence 999999777 677776 6555 458999999999999999 9999999996 9999999999999999999874
Q ss_pred C--------------CHhhhcCCCCEEEeccCCC------CcccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchH
Q 024306 171 K--------------NPEQITSEADIVIAAAGVA------NLVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYE 230 (269)
Q Consensus 171 ~--------------~l~~~~~~aDiVIsAtg~p------~~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~ 230 (269)
. ++.+. +++|+||++|+.+ ..++.++++++.+|+|++|+|.++ ++.
T Consensus 150 ~~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~t-------~l~------ 215 (263)
T 2d5c_A 150 QRALALAEEFGLRAVPLEKA-REARLLVNATRVGLEDPSASPLPAELFPEEGAAVDLVYRPLWT-------RFL------ 215 (263)
T ss_dssp HHHHHHHHHHTCEECCGGGG-GGCSEEEECSSTTTTCTTCCSSCGGGSCSSSEEEESCCSSSSC-------HHH------
T ss_pred HHHHHHHHHhccchhhHhhc-cCCCEEEEccCCCCCCCCCCCCCHHHcCCCCEEEEeecCCccc-------HHH------
Confidence 2 23455 7899999999954 235567889999999999987655 455
Q ss_pred HHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 231 EAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 231 ~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
+.+++.++ +.++| ..||+.|++.+|++|+|.
T Consensus 216 ~~a~~~g~-~~v~g------~~mlv~q~~~a~~~w~g~ 246 (263)
T 2d5c_A 216 REAKAKGL-KVQTG------LPMLAWQGALAFRLWTGL 246 (263)
T ss_dssp HHHHHTTC-EEECS------HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHCcC-EEECc------HHHHHHHHHHHHHHHhCC
Confidence 33566676 45655 469999999999999985
No 25
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=99.97 E-value=1.2e-32 Score=247.40 Aligned_cols=213 Identities=14% Similarity=0.136 Sum_probs=168.1
Q ss_pred eCCCcchHHHHHHHHH-HH----HHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCC
Q 024306 16 VGERRDSQTYVRNKIK-AC----EEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVS 90 (269)
Q Consensus 16 vg~~~~s~~y~~~~~~-~~----~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~ 90 (269)
+| +|.+||.++.+++ +| +++|+++.|..|+. +++.+.++.+.. +++.|+|||+|||+.+ .++++.++
T Consensus 9 iG-~Pi~hS~SP~~hn~~f~~~~~~~gl~~~Y~~~~v----~~l~~~~~~~~~-~~~~G~nVTiP~K~~v--~~~~d~l~ 80 (269)
T 3phh_A 9 FG-NPIKHSKSPLIHNACFLTFQKELRFLGHYHPILL----PLESHIKSEFLH-LGLSGANVTLPFKERA--FQVCDKIK 80 (269)
T ss_dssp EE-SSCTTCCHHHHHHHHHHHHHHHHSSEEEEEEEEC----CSSSCHHHHHHH-TTEEEEEECTTCHHHH--HHHSSEEC
T ss_pred EC-CCccccccHHHHHHHHHHHHHHcCCCCEEeeEEh----hhHHHHHHHHhh-CCCCEEEEccccHHHH--HHHHhhcC
Confidence 35 8999999999888 88 99999999999976 457777777776 6899999999999844 77888888
Q ss_pred c-cccccccc-cce-ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEe
Q 024306 91 L-EKDVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH 167 (269)
Q Consensus 91 p-~kdvdg~~-~~n-~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~ 167 (269)
| .+.+.+++ .++ .|++. |+|| |..|+++.|++.+ +|+++|+|+||+ |++++..|.+.|++|++++
T Consensus 81 ~~A~~iGAVNTi~~~~g~l~-G~NT------D~~Gf~~~L~~~~----~k~vlvlGaGGa-araia~~L~~~G~~v~V~n 148 (269)
T 3phh_A 81 GIALECGAVNTLVLENDELV-GYNT------DALGFYLSLKQKN----YQNALILGAGGS-AKALACELKKQGLQVSVLN 148 (269)
T ss_dssp GGGGGTTCCCEEEEETTEEE-EECC------HHHHHHHHCC-------CCEEEEECCSHH-HHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHhCceeEEEeeCCEEE-EecC------hHHHHHHHHHHcC----CCEEEEECCCHH-HHHHHHHHHHCCCEEEEEe
Confidence 8 55544432 222 34554 6555 6699999998754 999999999998 9999999999999999999
Q ss_pred CCCCCHhhh------------cCCCCEEEeccCC---CC-cccCC----CcCCCcEEEEeeecCCCCCCCCCCceeeccc
Q 024306 168 ALTKNPEQI------------TSEADIVIAAAGV---AN-LVRGS----WLKPGAVVLDVGTCPVDDPSCEYGYRLMGDV 227 (269)
Q Consensus 168 ~~t~~l~~~------------~~~aDiVIsAtg~---p~-~i~~~----~~~~g~vViDv~~~~~~~~~~~~~~~l~GDv 227 (269)
|+....++. +.++|+|||+|+. ++ .++.+ .++++.+|+|+.|+| +| +|+
T Consensus 149 Rt~~ka~~la~~~~~~~~~~~l~~~DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P-~T-------~ll--- 217 (269)
T 3phh_A 149 RSSRGLDFFQRLGCDCFMEPPKSAFDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLAYGF-LT-------PFL--- 217 (269)
T ss_dssp SSCTTHHHHHHHTCEEESSCCSSCCSEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS-CC-------HHH---
T ss_pred CCHHHHHHHHHCCCeEecHHHhccCCEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC-ch-------HHH---
Confidence 986543221 2479999999984 22 36666 678899999999999 88 677
Q ss_pred chHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 228 CYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 228 d~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
..+++.|+ ++.+|.+ ||++|++++||+|+|..
T Consensus 218 ---~~A~~~G~--~~~~Gl~-----MLv~Qa~~~f~lw~g~~ 249 (269)
T 3phh_A 218 ---SLAKELKT--PFQDGKD-----MLIYQAALSFEKFSASQ 249 (269)
T ss_dssp ---HHHHHTTC--CEECSHH-----HHHHHHHHHHHHHTTTS
T ss_pred ---HHHHHCcC--EEECCHH-----HHHHHHHHHHHHHhCCC
Confidence 44778888 4577785 99999999999999963
No 26
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=99.97 E-value=1.7e-31 Score=240.29 Aligned_cols=215 Identities=14% Similarity=0.242 Sum_probs=171.0
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +| ||.++.+++ +|+++|+++.|..|+ +++|.+.++.+.. .++.|+|||+|||+.+ ..+++.+++ .
T Consensus 12 viG-~P--hS~SP~~hn~~~~~~gl~~~Y~~~~----~~~l~~~~~~~~~-~~~~G~nVTiP~K~~i--~~~~d~~~~~A 81 (271)
T 1npy_A 12 LSG-RP--SNFGTTFHNYLYDKLGLNFIYKAFT----TQDIEHAIKGVRA-LGIRGCAVSMPFKETC--MPFLDEIHPSA 81 (271)
T ss_dssp ECS-SC--CSHHHHHHHHHHHHHTCCEEEEEEC----CSCHHHHHHHHHH-HTCCEEEECTTCTTTT--GGGCSEECHHH
T ss_pred EEC-CC--CcccHHHHHHHHHHcCCCcEEEeec----hhhHHHHHHHhcc-CCCCeEEECcCCHHHH--HHHHHHhhHHH
Confidence 567 55 999998888 999999999999997 2568888888877 4799999999999966 888888888 6
Q ss_pred ccccccc-cce-ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024306 93 KDVDGFH-PLN-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (269)
Q Consensus 93 kdvdg~~-~~n-~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~ 169 (269)
+.+.+++ .+| .|++. |+|| |..|+++.|++.+.+ .+++++|||+||+ |++++..|...|+ +|+|++|+
T Consensus 82 ~~iGAvNTi~~~~g~l~-g~NT------D~~G~~~~l~~~~~~-~~~~vlvlGaGga-arav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 82 QAIESVNTIVNDNGFLR-AYNT------DYIAIVKLIEKYHLN-KNAKVIVHGSGGM-AKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp HTTTCCCEEEEETTEEE-EECH------HHHHHHHHHHHTTCC-TTSCEEEECSSTT-HHHHHHHHHHTTCCCEEEECSC
T ss_pred HHhCCCCceECcCCEEE-eecC------CHHHHHHHHHHhCCC-CCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence 6665542 223 34554 6555 669999999987775 7899999999998 9999999999997 69999997
Q ss_pred CCC---Hh---------h-hcCCCCEEEeccCCC---C-----c-ccCCCcCCCcEEEEeeecCCCCCCCCCCceeeccc
Q 024306 170 TKN---PE---------Q-ITSEADIVIAAAGVA---N-----L-VRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDV 227 (269)
Q Consensus 170 t~~---l~---------~-~~~~aDiVIsAtg~p---~-----~-i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDv 227 (269)
... +. + .+.++|+|||+|+.. + . ++.++++++.+|+|+.|+|.+| +|+
T Consensus 153 ~~ka~~la~~~~~~~~~~~~~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~T-------~ll--- 222 (271)
T 1npy_A 153 VKTGQYLAALYGYAYINSLENQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVET-------PFI--- 222 (271)
T ss_dssp HHHHHHHHHHHTCEEESCCTTCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSSC-------HHH---
T ss_pred HHHHHHHHHHcCCccchhhhcccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCCC-------HHH---
Confidence 321 11 0 136799999999842 2 1 3445677899999999999887 677
Q ss_pred chHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 228 CYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 228 d~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
..+++.|+. +.+|.+ ||++|++++|++|+|.
T Consensus 223 ---~~A~~~G~~--~i~Gl~-----MLv~Qa~~~f~lw~g~ 253 (271)
T 1npy_A 223 ---RYAQARGKQ--TISGAA-----VIVLQAVEQFELYTHQ 253 (271)
T ss_dssp ---HHHHHTTCE--EECHHH-----HHHHHHHHHHHHHHSC
T ss_pred ---HHHHHCCCE--EECCHH-----HHHHHHHHHHHHHhCC
Confidence 447788884 467775 9999999999999996
No 27
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=99.97 E-value=3.6e-31 Score=235.86 Aligned_cols=212 Identities=14% Similarity=0.125 Sum_probs=170.1
Q ss_pred eCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 024306 16 VGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 93 (269)
Q Consensus 16 vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~k 93 (269)
+| +|.+||.++.+++ +|+++|+++.|..|+. ++++|.+.++.++ +++.|+|||+|||+.+ .++++. +| .+
T Consensus 6 iG-~pi~hS~SP~~hn~~~~~~gl~~~Y~~~~v--~~~~l~~~~~~~~--~~~~G~nVT~P~K~~v--~~~~d~-~~~A~ 77 (253)
T 3u62_A 6 IG-YPVRHSISPRLYNEYFKRAGMNHSYGMEEI--PPESFDTEIRRIL--EEYDGFNATIPHKERV--MRYVEP-SEDAQ 77 (253)
T ss_dssp EE-SSCTTCSHHHHHHHHHHHHTCCCEEEEEEC--CGGGHHHHHHHHH--HHCSEEEECTTCTTGG--GGGSEE-CHHHH
T ss_pred EC-CCccccccHHHHHHHHHHcCCCCEEEeEec--CHHHHHHHHHHHh--hCCCceeecCChHHHH--HHHhCC-CHHHH
Confidence 45 8999999999888 9999999999999965 5788999999998 5899999999999855 778888 88 44
Q ss_pred cccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--
Q 024306 94 DVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-- 170 (269)
Q Consensus 94 dvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t-- 170 (269)
.+. ++|+-....|+|| |..|+++.|++. +++| +++|||+|++ |++++..|.+.|+ +|++++|+.
T Consensus 78 ~iG---AvNTi~~~~G~NT------D~~G~~~~l~~~--~~~~-~vliiGaGg~-a~ai~~~L~~~G~~~I~v~nR~~~k 144 (253)
T 3u62_A 78 RIK---AVNCVFRGKGYNT------DWVGVVKSLEGV--EVKE-PVVVVGAGGA-ARAVIYALLQMGVKDIWVVNRTIER 144 (253)
T ss_dssp HHT---CCCEEETTEEECC------HHHHHHHHTTTC--CCCS-SEEEECCSHH-HHHHHHHHHHTTCCCEEEEESCHHH
T ss_pred HcC---cceEeecCEEEcc------hHHHHHHHHHhc--CCCC-eEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHH
Confidence 443 5665321136555 669999999865 5789 9999999998 9999999999998 799999873
Q ss_pred -------------CCHhhhcCCCCEEEeccCC---CC--cccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHH
Q 024306 171 -------------KNPEQITSEADIVIAAAGV---AN--LVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEA 232 (269)
Q Consensus 171 -------------~~l~~~~~~aDiVIsAtg~---p~--~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~ 232 (269)
.++.+.++++|+||++|+. |+ .++.++++++.+|+|+.|+ +| +++ +.
T Consensus 145 a~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~i~~~~l~~~~~V~Divy~--~T-------~ll-----~~- 209 (253)
T 3u62_A 145 AKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELPVSDDSLKNLSLVYDVIYF--DT-------PLV-----VK- 209 (253)
T ss_dssp HHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCSCCHHHHTTCSEEEECSSS--CC-------HHH-----HH-
T ss_pred HHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeeCC--Cc-------HHH-----HH-
Confidence 1234567889999999973 43 3666788999999999999 56 677 34
Q ss_pred hhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 024306 233 MRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGFT 269 (269)
Q Consensus 233 ~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~~ 269 (269)
++..++.. +.+|. .||+.|++.+|++|+|.+
T Consensus 210 A~~~G~~~-~~~Gl-----~MLv~Qa~~af~~wtg~~ 240 (253)
T 3u62_A 210 ARKLGVKH-IIKGN-----LMFYYQAMENLKIWGIYD 240 (253)
T ss_dssp HHHHTCSE-EECTH-----HHHHHHHHHHHHHTTCCC
T ss_pred HHHCCCcE-EECCH-----HHHHHHHHHHHHHHhCCC
Confidence 56677630 34455 599999999999999974
No 28
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=99.89 E-value=5.6e-24 Score=206.99 Aligned_cols=218 Identities=18% Similarity=0.222 Sum_probs=160.8
Q ss_pred EeCCCcchHHHHHHHHH-HHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCc-c
Q 024306 15 LVGERRDSQTYVRNKIK-ACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 92 (269)
Q Consensus 15 ~vg~~~~s~~y~~~~~~-~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p-~ 92 (269)
.+| +|.+||.++.+++ +|+++|+++.|..|+.+ ++.+.++.+.. +++.|+|||+|+|+.+ .++++.+++ +
T Consensus 239 viG-~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~~~----~l~~~~~~~~~-~~~~G~nVTiP~K~~i--~~~ld~~~~~A 310 (523)
T 2o7s_A 239 IIG-KPVSHSKSPIVHNQAFKSVDFNGVYVHLLVD----NLVSFLQAYSS-SDFAGFSCTIPHKEAA--LQCCDEVDPLA 310 (523)
T ss_dssp EEE-SSCTTCCHHHHHHHHHHHTTCSEEEEEEECS----CHHHHHHHTCS-TTEEEEEECTTCHHHH--HHHCSEECHHH
T ss_pred EEC-CCccCCccHHHHHHHHHHcCCCcEEEeEEcc----hHHHHHHHHhc-CCCCEEEECCCCHHHH--HHHhcccCHHH
Confidence 346 8999999998887 99999999999999763 68888888876 6899999999999743 677788887 6
Q ss_pred ccccccc-cce---ecccccCCCCCccccCCHHHHHHHHHHhC-------------CCCccceEEEEcCCcccHHHHHHH
Q 024306 93 KDVDGFH-PLN---IGNLAMRGREPLFIPCTPKGCIELLIRSG-------------VEIMGKNAVVIGRSNIVGLPTSLL 155 (269)
Q Consensus 93 kdvdg~~-~~n---~g~l~~g~~~~~~~p~t~~g~~~~l~~~~-------------~~l~gk~v~ViG~gg~vg~~~a~~ 155 (269)
+.+.+++ .+| .|++. |+|| |..|++..++... .+++||+++|+|+||+ |++++..
T Consensus 311 ~~iGAvNti~~~~~~gk~~-g~nT------D~~G~~~~l~~~~~~~~~~~~~~~~~~~l~~k~vlV~GaGGi-g~aia~~ 382 (523)
T 2o7s_A 311 KSIGAVNTILRRKSDGKLL-GYNT------DCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGA-GKALAYG 382 (523)
T ss_dssp HHHTCCSEEEECTTTCCEE-EECC------HHHHHHHHHHHHC-------------------CEEEECCSHH-HHHHHHH
T ss_pred HHhCCCeEEEEecCCCeEE-EEcC------CHHHHHHHHHHhhhhccccccccccccccCCCEEEEECCcHH-HHHHHHH
Confidence 6666652 233 24554 5544 6689999998641 3678999999999997 9999999
Q ss_pred HHhCCCEEEEEeCCCCC-----------------Hhh-hcCCCCEEEeccCC---C----CcccCCCcCCCcEEEEeeec
Q 024306 156 LQRHHATVSIVHALTKN-----------------PEQ-ITSEADIVIAAAGV---A----NLVRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 156 L~~~ga~Vti~~~~t~~-----------------l~~-~~~~aDiVIsAtg~---p----~~i~~~~~~~g~vViDv~~~ 210 (269)
|+++|++|++++|+... +.+ .....|++|+++|. | ..+....+.+...++|+.|+
T Consensus 383 L~~~G~~V~i~~R~~~~a~~la~~~~~~~~~~~dl~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~ 462 (523)
T 2o7s_A 383 AKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYT 462 (523)
T ss_dssp HHHHCC-CEEEESSHHHHHHHHHHTTC-CEETTTTTTC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCS
T ss_pred HHHCCCEEEEEECCHHHHHHHHHHcCCceeeHHHhhhccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeC
Confidence 99999999999987321 111 12347999999984 2 12444556667899999999
Q ss_pred CCCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 211 PVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 211 ~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
|..| +++ +. ++..|+.+ .+|.+ ||++|++.+|+.|+|.
T Consensus 463 p~~T-------~ll-----~~-a~~~G~~~--i~Gl~-----mlv~Qa~~~f~lwtg~ 500 (523)
T 2o7s_A 463 PRIT-------RLL-----RE-AEESGAIT--VSGSE-----MFVRQAYEQFEIFTGL 500 (523)
T ss_dssp SSSC-------HHH-----HH-HHTTTCEE--ECHHH-----HHHHHHHHHHHHHHSS
T ss_pred CccC-------HHH-----HH-HHHCCCEE--ECcHH-----HHHHHHHHHHHHHhCC
Confidence 8876 566 33 45567744 66774 9999999999999985
No 29
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=99.78 E-value=7.2e-20 Score=174.10 Aligned_cols=200 Identities=17% Similarity=0.237 Sum_probs=151.5
Q ss_pred chHHHHHHHHH-H--HHHc-CCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEE---eCCCCCCCCHHHHHhcCCccc
Q 024306 21 DSQTYVRNKIK-A--CEEV-GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILV---QLPLPQHLDEGKILDAVSLEK 93 (269)
Q Consensus 21 ~s~~y~~~~~~-~--~~~~-Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V---~~Pl~~~~~~~~i~~~i~p~k 93 (269)
+.|+.++.+++ + |+++ ||++.|+.|+.+ +.++|.++++.+. +++.|+|| ++|+|. ++++.+++
T Consensus 82 G~hS~sPvmh~ka~lf~~~gGid~~yi~ldv~-d~de~~~~v~~l~--~~f~GinvED~T~P~k~-----~il~~l~~-- 151 (439)
T 2dvm_A 82 GPLAGLPVMEGKALLFKRFGGVDAFPIMIKEQ-EPNKFIDIVKAIA--PTFGGINLEDIASPKCF-----YILERLRE-- 151 (439)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCEEEEEECSCC-SHHHHHHHHHHTG--GGCSEEEECSCCTTHHH-----HHHHHHHH--
T ss_pred eccccCHHHHHHHHHHHHhCCCCCeeeeeecC-CHHHHHHHHHHhC--ccCcEEEEEeCCCchHH-----HHHHHHHH--
Confidence 34888887766 6 9999 899999999762 5899999999997 68999999 999994 55665543
Q ss_pred ccccc-ccce--ecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEe
Q 024306 94 DVDGF-HPLN--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVH 167 (269)
Q Consensus 94 dvdg~-~~~n--~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga---~Vti~~ 167 (269)
.+ ++++ .+++. | +++..|++..|+..+.++++++|+|+|+|++ |++++.+|...|+ +|++++
T Consensus 152 ---avNt~vf~dD~~gt-g-------ntd~aG~~~AL~~~g~~l~~~rvlvlGAGgA-g~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 152 ---ELDIPVFHDDQQGT-A-------AVVLAGLLNALKVVGKKISEITLALFGAGAA-GFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp ---HCSSCEEEHHHHHH-H-------HHHHHHHHHHHHHHTCCTTTCCEEEECCSHH-HHHHHHHHHHTTCCGGGEEEEE
T ss_pred ---hcCEEEEeCCCcEE-e-------ehHHHHHHHHHHHhCCCccCCEEEEECccHH-HHHHHHHHHHcCCCcCeEEEEE
Confidence 22 2332 22222 2 4466999999999999999999999999998 9999999999998 699999
Q ss_pred ----CC----C-CC-----------------------HhhhcCCCCEEEeccCCC-CcccCCC---cCCCcEEEEeeecC
Q 024306 168 ----AL----T-KN-----------------------PEQITSEADIVIAAAGVA-NLVRGSW---LKPGAVVLDVGTCP 211 (269)
Q Consensus 168 ----~~----t-~~-----------------------l~~~~~~aDiVIsAtg~p-~~i~~~~---~~~g~vViDv~~~~ 211 (269)
|+ . .+ +.+.++++|++|++|+.| +.+++++ +.++.+|+|+ |||
T Consensus 220 ~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDL-ynP 298 (439)
T 2dvm_A 220 LVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPL-ANP 298 (439)
T ss_dssp EETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEEC-CSS
T ss_pred ccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHhccCCEEEEcCCCccCCCChHHHHhcCCCCEEEEC-CCC
Confidence 65 1 12 334567899999999984 6665544 5678899999 999
Q ss_pred CCCCCCCCCceeecccchHHHhhHcceecccCCcccHHHHHHHHHHHHHHH
Q 024306 212 VDDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 212 ~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~ 262 (269)
.+| .+. +. +++.|+.+ +..|.+ ||..|+..++
T Consensus 299 ~~t-------~~~-----~~-A~~~G~~i-vatG~~-----ml~~Q~nn~~ 330 (439)
T 2dvm_A 299 VPE-------ILP-----EE-AKKAGARI-VATGRS-----DYPNQINNLL 330 (439)
T ss_dssp SCS-------SCH-----HH-HHHHTCSE-ECBSCS-----SSSSBCCGGG
T ss_pred CCc-------chH-----HH-HHHcCCeE-EcCCCc-----hhHHHHHHHh
Confidence 876 455 34 55667633 336775 8888765443
No 30
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=99.71 E-value=5.1e-19 Score=159.16 Aligned_cols=221 Identities=15% Similarity=0.072 Sum_probs=159.7
Q ss_pred CcchHHHHHHHHH-HHH-----HcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCcc
Q 024306 19 RRDSQTYVRNKIK-ACE-----EVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLE 92 (269)
Q Consensus 19 ~~~s~~y~~~~~~-~~~-----~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~ 92 (269)
.|-+||.++.+++ .|+ +.|+++.|..++. ++++|.+.++.+.-..+..|+|++.|++...+...+.+.++..
T Consensus 2 ~~i~hs~sp~~h~~~~~~~~~~~~g~~~~y~~~~v--~~~~~~~~~~~~~~~~~~~g~~~t~~~~~G~~~~~~~~~~~~~ 79 (287)
T 1lu9_A 2 KKLLFQFDTDATPSVFDVVVGYDGGADHITGYGNV--TPDNVGAYVDGTIYTRGGKEKQSTAIFVGGGDMAAGERVFEAV 79 (287)
T ss_dssp CCEEEEEESSSSCCHHHHHHHHHTTCSEEEEESSC--CTTTHHHHHHHHHSSCCGGGGGGEEEEEECSCHHHHHHHHHHH
T ss_pred CceEEEccCCCCCCchhhheeeccCcceEeccCCc--CHHHHHhhhcceEEecCccccccceEEEccchHHHHHHHHHHH
Confidence 3456666777666 777 5999999999955 6789999999974445789999999998766766555555443
Q ss_pred ccccccccceecccccCCCCCccccCCHHHHHHHHHHh-CCCCccceEEEEc-CCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 93 KDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 93 kdvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~-~~~l~gk~v~ViG-~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+ ..-+.++|+..+.. .. -.++|+.|+++.|++. +.+++||+++|+| +||+ |++++..|+++|++|++++|+.
T Consensus 80 ~-~~~~gavnt~~~~~---~~-G~nTd~~g~~~~l~~~~~~~l~gk~vlVtGaaGGi-G~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 80 K-KRFFGPFRVSCMLD---SN-GSNTTAAAGVALVVKAAGGSVKGKKAVVLAGTGPV-GMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp H-HHCBTTBCCEEEEC---ST-THHHHHHHHHHHHHHHTTSCCTTCEEEEETCSSHH-HHHHHHHHHHTTCEEEEEESSH
T ss_pred H-HhcCCCeEEEEecC---CC-cCCchHHHHHHHHHHhhccCCCCCEEEEECCCcHH-HHHHHHHHHHCcCEEEEEECCH
Confidence 3 22235677543321 11 2366889999999988 8889999999999 6775 9999999999999999998862
Q ss_pred C--------------------------CHhhhcCCCCEEEeccCCC---Ccc-cCCCcCCCcEEEEeeecCCC----CCC
Q 024306 171 K--------------------------NPEQITSEADIVIAAAGVA---NLV-RGSWLKPGAVVLDVGTCPVD----DPS 216 (269)
Q Consensus 171 ~--------------------------~l~~~~~~aDiVIsAtg~p---~~i-~~~~~~~g~vViDv~~~~~~----~~~ 216 (269)
. ++.+.++++|+||+++|.. ..+ +.+.+++...++|+.|.+.. |
T Consensus 154 ~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~~i~~t-- 231 (287)
T 1lu9_A 154 DKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGI-- 231 (287)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSCSBTTS--
T ss_pred HHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhHHhhcc--
Confidence 1 1234567789999999742 122 33345777899999998876 5
Q ss_pred CCCCceeecccchHHHh------hHcceecccCCcccHHHHHHHHHHHHHHHHHHhCC
Q 024306 217 CEYGYRLMGDVCYEEAM------RLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 217 ~~~~~~l~GDvd~~~~~------~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~~~ 268 (269)
+++ +. + +..++. +.+|++ ||++|++.+ ++|++.
T Consensus 232 -----~ll-----~~-a~~~~~~~~~G~~--~v~gl~-----ml~~qa~~a-~~~~~~ 270 (287)
T 1lu9_A 232 -----DAT-----DK-GKEYGGKRAFGAL--GIGGLK-----LKLHRACIA-KLFESS 270 (287)
T ss_dssp -----CTT-----CE-EEEETTEEEECHH--HHHHHH-----HHHHHHHHH-HHTSCS
T ss_pred -----hHH-----hh-ccccCCCccccce--eECchH-----HHHHHHHHH-HHhhCC
Confidence 344 12 3 445553 456664 999999988 888874
No 31
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.16 E-value=1.8e-10 Score=103.92 Aligned_cols=120 Identities=20% Similarity=0.319 Sum_probs=93.1
Q ss_pred HHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------CCHhhhcCCCCEEEeccCCCC
Q 024306 128 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 128 ~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------~~l~~~~~~aDiVIsAtg~p~ 191 (269)
+..+.++.|+++.|||.|++ |+++++.|...|++|++++++. .++.+.+++||+||++++. +
T Consensus 149 ~~~~~~l~g~~v~IiG~G~i-G~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~-~ 226 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLGRT-GMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPS-M 226 (300)
T ss_dssp HTCSSCSTTSEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSS-C
T ss_pred HhcCCCCCCCEEEEEcccHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCCh-h
Confidence 33567899999999999986 9999999999999999998763 2355678899999999996 4
Q ss_pred cccC---CCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHccee---cc-cCCcccHHHHHHHHHHHHHHHH
Q 024306 192 LVRG---SWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVI---TP-VPGGVGPMTVAMLLSNTLDSAK 263 (269)
Q Consensus 192 ~i~~---~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~---tp-vpgGvGp~T~~mLl~n~v~a~~ 263 (269)
.++. +.+++++++||+++.+. +++++. ++..+.. .| +||+++|.+...|+.+.+..+-
T Consensus 227 ~i~~~~~~~mk~g~~lin~a~g~~-------------~~~~~~-a~~~G~~~i~~pg~~g~v~~a~a~~l~~~~~~~~l 291 (300)
T 2rir_A 227 ILNQTVLSSMTPKTLILDLASRPG-------------GTDFKY-AEKQGIKALLAPGLPGIVAPKTAGQILANVLSKLL 291 (300)
T ss_dssp CBCHHHHTTSCTTCEEEECSSTTC-------------SBCHHH-HHHHTCEEEECCCHHHHHCHHHHHHHHHHHHHHHH
T ss_pred hhCHHHHHhCCCCCEEEEEeCCCC-------------CcCHHH-HHHCCCEEEECCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 5544 34689999999998753 233323 3444443 25 7899999999999999887664
No 32
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=99.09 E-value=2.3e-10 Score=91.95 Aligned_cols=92 Identities=16% Similarity=0.336 Sum_probs=76.0
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------------CCHhhhcCCCC
Q 024306 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------KNPEQITSEAD 181 (269)
Q Consensus 119 t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-----------------~~l~~~~~~aD 181 (269)
.+...++.++... +++++|||+|++ |+.++..|...|++|++++++. .++.+.++++|
T Consensus 8 v~~~a~~~~~~~~----~~~v~iiG~G~i-G~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~D 82 (144)
T 3oj0_A 8 IPSIVYDIVRKNG----GNKILLVGNGML-ASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNND 82 (144)
T ss_dssp HHHHHHHHHHHHC----CCEEEEECCSHH-HHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCS
T ss_pred HHHHHHHHHHhcc----CCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCC
Confidence 4566777777653 899999999886 9999999999999999998762 34567778999
Q ss_pred EEEeccCCCCc-ccCCCcCCCcEEEEeeecCCCCC
Q 024306 182 IVIAAAGVANL-VRGSWLKPGAVVLDVGTCPVDDP 215 (269)
Q Consensus 182 iVIsAtg~p~~-i~~~~~~~g~vViDv~~~~~~~~ 215 (269)
+||++||.++. ++.++++++.+++|++.++..+|
T Consensus 83 ivi~at~~~~~~~~~~~l~~g~~vid~~~p~~~~~ 117 (144)
T 3oj0_A 83 VIITATSSKTPIVEERSLMPGKLFIDLGNPPNIER 117 (144)
T ss_dssp EEEECSCCSSCSBCGGGCCTTCEEEECCSSCSBCC
T ss_pred EEEEeCCCCCcEeeHHHcCCCCEEEEccCCccCCC
Confidence 99999998765 67899999999999998765443
No 33
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.00 E-value=1.7e-09 Score=97.31 Aligned_cols=128 Identities=20% Similarity=0.294 Sum_probs=95.4
Q ss_pred CHHHHHHH-HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------CCHhhhcCCCC
Q 024306 119 TPKGCIEL-LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQITSEAD 181 (269)
Q Consensus 119 t~~g~~~~-l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------~~l~~~~~~aD 181 (269)
+++.++.+ |...+.++.|+++.|||.|++ |+.+++.|...|++|++++++. .++.+.++++|
T Consensus 137 vae~a~~~~l~~~~~~l~g~~v~IiG~G~i-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aD 215 (293)
T 3d4o_A 137 TAEGTIMMAIQHTDFTIHGANVAVLGLGRV-GMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVD 215 (293)
T ss_dssp HHHHHHHHHHHHCSSCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCS
T ss_pred HHHHHHHHHHHhcCCCCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCC
Confidence 45555554 445678899999999999987 9999999999999999998763 13456688999
Q ss_pred EEEeccCCCCcccCC---CcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHccee----cccCCcccHHHHHHH
Q 024306 182 IVIAAAGVANLVRGS---WLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVI----TPVPGGVGPMTVAML 254 (269)
Q Consensus 182 iVIsAtg~p~~i~~~---~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~----tpvpgGvGp~T~~mL 254 (269)
+||.+++. +.+..+ .++++.++||+++.|. ++|++. ++..+.. .-.|+.++|.|...+
T Consensus 216 vVi~~~p~-~~i~~~~l~~mk~~~~lin~ar~~~-------------~~~~~~-a~~~Gv~~~~~~~l~~~v~p~~a~~~ 280 (293)
T 3d4o_A 216 VCINTIPA-LVVTANVLAEMPSHTFVIDLASKPG-------------GTDFRY-AEKRGIKALLVPGLPGIVAPKTAGRI 280 (293)
T ss_dssp EEEECCSS-CCBCHHHHHHSCTTCEEEECSSTTC-------------SBCHHH-HHHHTCEEEECCCHHHHHCHHHHHHH
T ss_pred EEEECCCh-HHhCHHHHHhcCCCCEEEEecCCCC-------------CCCHHH-HHHCCCEEEECCCCCcccCHHHHHHH
Confidence 99999975 455443 4689999999998653 334433 3444432 335677889999999
Q ss_pred HHHHHHHH
Q 024306 255 LSNTLDSA 262 (269)
Q Consensus 255 l~n~v~a~ 262 (269)
+.+.+..+
T Consensus 281 ~~~~~~~~ 288 (293)
T 3d4o_A 281 LADVLVKL 288 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99888665
No 34
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=98.96 E-value=3.9e-09 Score=98.49 Aligned_cols=166 Identities=20% Similarity=0.296 Sum_probs=118.2
Q ss_pred HHHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHH---HHhcCCccccccccccc
Q 024306 26 VRNKIKACEE-VGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK---ILDAVSLEKDVDGFHPL 101 (269)
Q Consensus 26 ~~~~~~~~~~-~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~---i~~~i~p~kdvdg~~~~ 101 (269)
...|...|+. -||++.-+++... +.+|+.+.++.+- |.+.+|++ +.+...+ +++.+...-++-.+|.-
T Consensus 96 ~egK~~Lf~~~agid~~pi~ldv~-~~dE~v~~vk~~~--p~f~~i~l-----ED~~~p~af~il~r~r~~~~Ipvf~DD 167 (388)
T 1vl6_A 96 MEGKAFLFKAFADIDAFPICLSES-EEEKIISIVKSLE--PSFGGINL-----EDIGAPKCFRILQRLSEEMNIPVFHDD 167 (388)
T ss_dssp HHHHHHHHHHHHCCEEEEEECSCC-CHHHHHHHHHHTG--GGCSEEEE-----CSCCTTHHHHHHHHHHHHCSSCEEEHH
T ss_pred hhCHHHHHHhccCCceEeEEeCCC-CHHHHHHHHHHcC--CcceEeCH-----hhcCCHHHHHHHHHhhhhcCcceeccc
Confidence 3456666664 5799998988776 5889999998876 56888876 3332223 22222222122222211
Q ss_pred eecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC----C------
Q 024306 102 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL----T------ 170 (269)
Q Consensus 102 n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~----t------ 170 (269)
-.|.. -.+..|++..++-.+.++++.+|+|+|+|.+ |..++++|...|+ +|++|+|+ .
T Consensus 168 iqGTa----------sV~lAal~~A~~i~g~~l~~~kVVv~GAGaA-G~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~ 236 (388)
T 1vl6_A 168 QQGTA----------VVVSAAFLNALKLTEKKIEEVKVVVNGIGAA-GYNIVKFLLDLGVKNVVAVDRKGILNENDPETC 236 (388)
T ss_dssp HHHHH----------HHHHHHHHHHHHHHTCCTTTCEEEEECCSHH-HHHHHHHHHHHTCCEEEEEETTEECCTTSGGGC
T ss_pred cccHH----------HHHHHHHHHHHHHhCCCCCCcEEEEECCCHH-HHHHHHHHHhCCCCeEEEEECCCcccCCCcccc
Confidence 12211 1133566667777788999999999999997 9999999999998 79999886 1
Q ss_pred ------------------CCHhhhcCCCCEEEeccCCCCcccCCCcC---CCcEEEEeeecCC
Q 024306 171 ------------------KNPEQITSEADIVIAAAGVANLVRGSWLK---PGAVVLDVGTCPV 212 (269)
Q Consensus 171 ------------------~~l~~~~~~aDiVIsAtg~p~~i~~~~~~---~g~vViDv~~~~~ 212 (269)
.+|.+.+++||++|.+++ |+.++++|++ ++.+|+|++ ||.
T Consensus 237 L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG~Sa-p~l~t~emVk~Ma~~pIIfalS-NPt 297 (388)
T 1vl6_A 237 LNEYHLEIARITNPERLSGDLETALEGADFFIGVSR-GNILKPEWIKKMSRKPVIFALA-NPV 297 (388)
T ss_dssp SSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEECSC-SSCSCHHHHTTSCSSCEEEECC-SSS
T ss_pred cCHHHHHHHHhhhccCchhhHHHHHccCCEEEEeCC-CCccCHHHHHhcCCCCEEEEcC-CCC
Confidence 247889999999999988 8889999875 467999999 553
No 35
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.95 E-value=2.8e-10 Score=105.46 Aligned_cols=156 Identities=19% Similarity=0.179 Sum_probs=104.5
Q ss_pred HHHHcCC-eEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEE-eCCCCCCCCHHHHHhcCCccccccc--cccceecccc
Q 024306 32 ACEEVGI-KSIVTEFADGCTEDEVLNALSNYNQDSSINGILV-QLPLPQHLDEGKILDAVSLEKDVDG--FHPLNIGNLA 107 (269)
Q Consensus 32 ~~~~~Gi-~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V-~~Pl~~~~~~~~i~~~i~p~kdvdg--~~~~n~g~l~ 107 (269)
.+.+.|. .+.|..+..+ + ++.+.+.+. ++.|+++ ++|+|.+. ..+++.+++..-.-+ +..+|+.+..
T Consensus 82 ~~~~~g~~~~~y~~~~~~--~-~l~~~l~~~----gi~~~~~etvp~k~~~--~~~l~~~s~~Ag~~a~~~gA~nt~~~~ 152 (361)
T 1pjc_A 82 DLMQKDQLLFTYLHLAAA--R-ELTEQLMRV----GLTAIAYETVELPNRS--LPLLTPMSIIAGRLSVQFGARFLERQQ 152 (361)
T ss_dssp GGCCTTCEEEECCCGGGC--H-HHHHHHHHH----TCEEEEGGGCCCTTSC--CTTTHHHHHHHHHHHHHHHHHHTSGGG
T ss_pred HhhcCCCEEEEEeccccC--H-HHHHHHHHc----CCeEEEEeeeEcccCC--ccccCcchHHHHHHHHHHHHHHHhhcc
Confidence 5567885 8888888763 3 565555544 6889998 99998643 445555554222110 1356655544
Q ss_pred cCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------------
Q 024306 108 MRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------- 171 (269)
Q Consensus 108 ~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------- 171 (269)
.| + +|. +... ..+++++|+|+|+|++ |+.+++.|...|++|++++++..
T Consensus 153 ~g--~-G~~----------l~~l-~~l~~~~VlViGaGgv-G~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~ 217 (361)
T 1pjc_A 153 GG--R-GVL----------LGGV-PGVKPGKVVILGGGVV-GTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL 217 (361)
T ss_dssp TS--C-CCC----------TTCB-TTBCCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE
T ss_pred CC--C-cee----------ccCC-CCCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee
Confidence 22 1 231 0000 2367899999999886 99999999999999999987621
Q ss_pred -----CHhhhcCCCCEEEeccCCCC-----ccc---CCCcCCCcEEEEeeecC
Q 024306 172 -----NPEQITSEADIVIAAAGVAN-----LVR---GSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 172 -----~l~~~~~~aDiVIsAtg~p~-----~i~---~~~~~~g~vViDv~~~~ 211 (269)
++.+.++.+|+||+++|.|. ++. .+.++++.+++|+++++
T Consensus 218 ~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~ 270 (361)
T 1pjc_A 218 YSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQ 270 (361)
T ss_dssp ECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred eCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCC
Confidence 12345568999999998643 233 24578999999999976
No 36
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.79 E-value=4.4e-09 Score=98.84 Aligned_cols=139 Identities=12% Similarity=0.118 Sum_probs=88.1
Q ss_pred HHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCCC-----------------CHhhhcCCCC
Q 024306 120 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-----------------NPEQITSEAD 181 (269)
Q Consensus 120 ~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t~-----------------~l~~~~~~aD 181 (269)
+...++..+....++.|++|+|+|+|++ |+.+++.|...|+ +|++++|+.. ++.+.+.++|
T Consensus 151 a~~av~~a~~~~~~l~g~~VlIiGaG~i-G~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aD 229 (404)
T 1gpj_A 151 GSAAVELAERELGSLHDKTVLVVGAGEM-GKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSD 229 (404)
T ss_dssp HHHHHHHHHHHHSCCTTCEEEEESCCHH-HHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCS
T ss_pred HHHHHHHHHHHhccccCCEEEEEChHHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCC
Confidence 3444454442223579999999999887 9999999999998 8999988631 2345567899
Q ss_pred EEEeccCCCCc-ccCCC-----c----CCCcEEEEeeecCCCCCCC--CCCceeecccch-HHHhh---HcceecccCCc
Q 024306 182 IVIAAAGVANL-VRGSW-----L----KPGAVVLDVGTCPVDDPSC--EYGYRLMGDVCY-EEAMR---LASVITPVPGG 245 (269)
Q Consensus 182 iVIsAtg~p~~-i~~~~-----~----~~g~vViDv~~~~~~~~~~--~~~~~l~GDvd~-~~~~~---~~~~~tpvpgG 245 (269)
+||++||.+.. ++.+. + .++.+++|+++++..++.- ..+..++ |+|. ..+.+ ..+. ....|
T Consensus 230 vVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~~i~~~l~~l~~v~l~-d~d~l~~~~~~~~~~r~--~~~~~ 306 (404)
T 1gpj_A 230 VVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDVEEGVENIEDVEVR-TIDDLRVIARENLERRR--KEIPK 306 (404)
T ss_dssp EEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCSBCTTGGGSTTEEEE-EHHHHHHHHHHHHHHHH--TTHHH
T ss_pred EEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCCCCCccccccCCeEEE-eHhhHHHHHHHHHHHHH--HHHHH
Confidence 99999997665 43332 2 2468999999865434210 0011111 1221 11111 1122 12233
Q ss_pred ccHHHHHHHHHHHHHHHHHHhC
Q 024306 246 VGPMTVAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 246 vGp~T~~mLl~n~v~a~~~~~~ 267 (269)
. .||+.|.+.+|+.|++
T Consensus 307 ~-----~~li~q~~~~f~~w~~ 323 (404)
T 1gpj_A 307 V-----EKLIEEELSTVEEELE 323 (404)
T ss_dssp H-----HHHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHHHHHH
Confidence 3 5999999999999985
No 37
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=98.77 E-value=2.5e-08 Score=93.25 Aligned_cols=166 Identities=16% Similarity=0.270 Sum_probs=119.4
Q ss_pred HHHHHHHHHH-cCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCcccc---ccccccc
Q 024306 26 VRNKIKACEE-VGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKD---VDGFHPL 101 (269)
Q Consensus 26 ~~~~~~~~~~-~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kd---vdg~~~~ 101 (269)
...|...|+. -||++.-+++... +.+|+.+.++.+- |.+.||++ +.+...+.++.+.-.++ +-.+|.-
T Consensus 92 ~eGK~~Lf~~~agid~~pi~Ldv~-~~dEfv~~v~~~~--p~F~~I~l-----ED~~~p~~f~il~~~r~~~~ipvf~DD 163 (398)
T 2a9f_A 92 MEGKAALFKAFAGVDAIPIVLDTK-DTEEIISIVKALA--PTFGGINL-----EDISAPRCFEIEQRLIKECHIPVFHDD 163 (398)
T ss_dssp HHHHHHHHHHHSSCEEEEEECCCC-CHHHHHHHHHHHG--GGCSEEEE-----CSCCTTHHHHHHHHHHHHCSSCEEEHH
T ss_pred hhCHHHHHHhccCCceeeeEeCCC-CHHHHHHHHHHcC--CceeEecc-----ccCCChHHHHHHHHhhhcCCcceecch
Confidence 3457776665 5699998999776 5889999998876 67899888 33333333333322222 2222211
Q ss_pred eecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC--------C--
Q 024306 102 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL--------T-- 170 (269)
Q Consensus 102 n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~--------t-- 170 (269)
-.|.. -.+..|.+..++-.+..++..+|+|+|+|-+ |..++++|...|+ +|++|+++ .
T Consensus 164 iqGTa----------~V~lAall~al~l~g~~l~d~kVVi~GAGaA-G~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L 232 (398)
T 2a9f_A 164 QHGTA----------IVVLAAIFNSLKLLKKSLDEVSIVVNGGGSA-GLSITRKLLAAGATKVTVVDKFGIINEQEAAQL 232 (398)
T ss_dssp HHHHH----------HHHHHHHHHHHHTTTCCTTSCEEEEECCSHH-HHHHHHHHHHHTCCEEEEEETTEECCTTCCCSC
T ss_pred hhhHH----------HHHHHHHHHHHHHhCCCCCccEEEEECCCHH-HHHHHHHHHHcCCCeEEEEECCCcccCCccccc
Confidence 12211 1134567777787888999999999999887 9999999999999 89999764 1
Q ss_pred -----------------CCHhhhcCCCCEEEeccCCCCcccCCCc---CCCcEEEEeeecCC
Q 024306 171 -----------------KNPEQITSEADIVIAAAGVANLVRGSWL---KPGAVVLDVGTCPV 212 (269)
Q Consensus 171 -----------------~~l~~~~~~aDiVIsAtg~p~~i~~~~~---~~g~vViDv~~~~~ 212 (269)
.+|.+.++.||++|.+.+ |+.+++||+ +++.+|++++ ||.
T Consensus 233 ~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~Sa-pgl~T~EmVk~Ma~~pIIfals-NPt 292 (398)
T 2a9f_A 233 APHHLDIAKVTNREFKSGTLEDALEGADIFIGVSA-PGVLKAEWISKMAARPVIFAMA-NPI 292 (398)
T ss_dssp CC---CHHHHHSCTTCCCSCSHHHHTTCSEEECCS-TTCCCHHHHHTSCSSCEEEECC-SSS
T ss_pred hHHHHHHhhccCcccchhhHHHHhccCCEEEecCC-CCCCCHHHHHhhCCCCEEEECC-CCC
Confidence 136788899999998866 899999987 4699999999 664
No 38
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.73 E-value=3e-08 Score=93.90 Aligned_cols=92 Identities=22% Similarity=0.325 Sum_probs=75.7
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEE
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIV 183 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiV 183 (269)
.|+...+-.+++..+..+.||+|+|+|.|.+ |+++|+.|...|++|+++++.. .++.+.+++||+|
T Consensus 192 Gt~~slldgi~ratg~~L~GktVgIiG~G~I-G~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVV 270 (436)
T 3h9u_A 192 GCRESLVDGIKRATDVMIAGKTACVCGYGDV-GKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIF 270 (436)
T ss_dssp HHHHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEE
T ss_pred cchHHHHHHHHHhcCCcccCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEE
Confidence 3433333333445788999999999999986 9999999999999999998752 3678899999999
Q ss_pred EeccCCCCcccCCCc---CCCcEEEEeee
Q 024306 184 IAAAGVANLVRGSWL---KPGAVVLDVGT 209 (269)
Q Consensus 184 IsAtg~p~~i~~~~~---~~g~vViDv~~ 209 (269)
|.+++..++++.+++ ++|++||+++.
T Consensus 271 ilt~gt~~iI~~e~l~~MK~gAIVINvgR 299 (436)
T 3h9u_A 271 VTTTGNDDIITSEHFPRMRDDAIVCNIGH 299 (436)
T ss_dssp EECSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred EECCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence 999988888887765 88999999994
No 39
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.64 E-value=6.2e-08 Score=92.00 Aligned_cols=90 Identities=22% Similarity=0.304 Sum_probs=74.9
Q ss_pred HHHHHHH-HHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEec
Q 024306 121 KGCIELL-IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAA 186 (269)
Q Consensus 121 ~g~~~~l-~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsA 186 (269)
+.++..+ +..+..+.||+++|+|.|.+ |+.+|+.|...|++|+++++.. .++.+.+++||+||++
T Consensus 231 eslvdgI~Ratg~~L~GKTVgVIG~G~I-Gr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~a 309 (464)
T 3n58_A 231 ESLVDGIRRGTDVMMAGKVAVVCGYGDV-GKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTT 309 (464)
T ss_dssp HHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEEC
T ss_pred HHHHHHHHHhcCCcccCCEEEEECcCHH-HHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEEC
Confidence 3444433 35788999999999999986 9999999999999999997641 3577889999999999
Q ss_pred cCCCCcccCCCc---CCCcEEEEeeecC
Q 024306 187 AGVANLVRGSWL---KPGAVVLDVGTCP 211 (269)
Q Consensus 187 tg~p~~i~~~~~---~~g~vViDv~~~~ 211 (269)
+|.+++++.+.| |+|+++|+++...
T Consensus 310 tgt~~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 310 TGNKDVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp CSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred CCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence 998889887765 8999999999654
No 40
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.64 E-value=8.1e-08 Score=90.85 Aligned_cols=92 Identities=21% Similarity=0.300 Sum_probs=76.0
Q ss_pred HHHHHHHHH-HhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEe
Q 024306 120 PKGCIELLI-RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIA 185 (269)
Q Consensus 120 ~~g~~~~l~-~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIs 185 (269)
...++..+. ..+..+.||+|+|+|.|.+ |+.+++.|...|++|+++++.. .++.+.+++||+||+
T Consensus 203 ~~s~~~gi~rat~~~L~GktV~ViG~G~I-Gk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~ 281 (435)
T 3gvp_A 203 RESILDGLKRTTDMMFGGKQVVVCGYGEV-GKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVIT 281 (435)
T ss_dssp HHHHHHHHHHHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEE
T ss_pred HHHHHHHHHHhhCceecCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEE
Confidence 344444443 4578899999999999986 9999999999999999998642 357788999999999
Q ss_pred ccCCCCcccCCC---cCCCcEEEEeeecCC
Q 024306 186 AAGVANLVRGSW---LKPGAVVLDVGTCPV 212 (269)
Q Consensus 186 Atg~p~~i~~~~---~~~g~vViDv~~~~~ 212 (269)
++|.+++++.+. +++|++|++++....
T Consensus 282 atgt~~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 282 CTGNKNVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp CSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred CCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence 999888898775 489999999997654
No 41
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.64 E-value=6.1e-08 Score=90.51 Aligned_cols=122 Identities=22% Similarity=0.264 Sum_probs=83.1
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------------------------CHh
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------------------------NPE 174 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------------------------~l~ 174 (269)
+.+++|+|+|+|.+ |..+++.|...|++|++++++.. ++.
T Consensus 182 v~~~kV~ViG~G~i-G~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 182 VKPASALVLGVGVA-GLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp ECCCEEEEESCSHH-HHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred cCCCEEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 58999999999886 99999999999999999977631 244
Q ss_pred hhcCCCCEEEeccCC-----CCcccCCCc---CCCcEEEEeeecCCCCCCCCCCceeecccchHHHhh-HcceecccCCc
Q 024306 175 QITSEADIVIAAAGV-----ANLVRGSWL---KPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMR-LASVITPVPGG 245 (269)
Q Consensus 175 ~~~~~aDiVIsAtg~-----p~~i~~~~~---~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~-~~~~~tpvpgG 245 (269)
+.+++||+||+++.. |++++++++ ++|++|||++..+- .+.++. + -+.+ +.. .. ..-+++=.||-
T Consensus 261 e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~G--G~~e~t-~-~~~~-~~~-~gV~~~~v~nlP~~ 334 (381)
T 3p2y_A 261 DAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETG--GNCELT-E-PGRT-IVH-HGVTITSPLNLPAT 334 (381)
T ss_dssp HHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGT--CSBTTC-C-TTCE-EEE-TTEEEECCSCTGGG
T ss_pred HHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCC--Cccccc-c-CCCe-EEE-CCEEEEeeCCCchh
Confidence 678999999998743 456888875 78999999998752 111000 0 0000 000 01 11123345777
Q ss_pred ccHHHHHHHHHHHHHHHH
Q 024306 246 VGPMTVAMLLSNTLDSAK 263 (269)
Q Consensus 246 vGp~T~~mLl~n~v~a~~ 263 (269)
+ |.|...++.|.+..+-
T Consensus 335 v-p~tAS~~~s~~l~~~l 351 (381)
T 3p2y_A 335 M-PEHASELYAKNVTALL 351 (381)
T ss_dssp S-HHHHHHHHHHHHHHHH
T ss_pred h-HHHHHHHHHHHHHHHH
Confidence 7 8988888887776554
No 42
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.45 E-value=3.7e-07 Score=87.88 Aligned_cols=83 Identities=27% Similarity=0.332 Sum_probs=71.6
Q ss_pred HhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCCCCcccC
Q 024306 129 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLVRG 195 (269)
Q Consensus 129 ~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~p~~i~~ 195 (269)
..+..+.||+|.|||.|.+ |+.+|+.|...|++|+++++.. .++.+.+++||+||++++.+++++.
T Consensus 270 ~~g~~L~GktVgIIG~G~I-G~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~~t~~lI~~ 348 (494)
T 3d64_A 270 ATDVMIAGKIAVVAGYGDV-GKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVINH 348 (494)
T ss_dssp HHCCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECSSSSCSBCH
T ss_pred ccccccCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECCCcccccCH
Confidence 3577899999999999886 9999999999999999998763 2567889999999999988888877
Q ss_pred CC---cCCCcEEEEeeecCC
Q 024306 196 SW---LKPGAVVLDVGTCPV 212 (269)
Q Consensus 196 ~~---~~~g~vViDv~~~~~ 212 (269)
+. +|+|++++|++....
T Consensus 349 ~~l~~MK~gAilINvgrg~v 368 (494)
T 3d64_A 349 DHMKAMRHNAIVCNIGHFDS 368 (494)
T ss_dssp HHHHHCCTTEEEEECSSSSC
T ss_pred HHHhhCCCCcEEEEcCCCcc
Confidence 65 589999999997655
No 43
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.42 E-value=3.5e-07 Score=86.03 Aligned_cols=123 Identities=24% Similarity=0.247 Sum_probs=81.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------------------------
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------------------------------- 171 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------------------------------------- 171 (269)
.+.+.+|+|+|+|.+ |..+++.|...|++|++++++..
T Consensus 187 ~v~~~kV~ViG~G~i-G~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~ 265 (405)
T 4dio_A 187 TVPAAKIFVMGAGVA-GLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ 265 (405)
T ss_dssp EECCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHH
T ss_pred CcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhh
Confidence 357899999999876 99999999999999999976531
Q ss_pred --CHhhhcCCCCEEEeccC-----CCCcccCCCc---CCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhH-cceec
Q 024306 172 --NPEQITSEADIVIAAAG-----VANLVRGSWL---KPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRL-ASVIT 240 (269)
Q Consensus 172 --~l~~~~~~aDiVIsAtg-----~p~~i~~~~~---~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~-~~~~t 240 (269)
++.+.+++|||||+++. .|.+++++++ ++|++|||++..+- .+.++. + .++. +.. ... .-+++
T Consensus 266 ~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~G--G~~e~t-~-~~~~-~~~-~GV~~~gv~ 339 (405)
T 4dio_A 266 AALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERG--GNIEGA-E-AGKV-TEV-GGVRIVGHL 339 (405)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGT--CSBTTC-C-TTEE-EEE-TTEEEEECS
T ss_pred HhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCC--CCcccc-C-CCCe-EEE-CCEEEEEeC
Confidence 23456789999999864 3556888875 78999999998652 010000 0 0000 000 111 11223
Q ss_pred ccCCcccHHHHHHHHHHHHHHHH
Q 024306 241 PVPGGVGPMTVAMLLSNTLDSAK 263 (269)
Q Consensus 241 pvpgGvGp~T~~mLl~n~v~a~~ 263 (269)
=.||-+ |.|...++.|.+..+-
T Consensus 340 nlP~~v-p~tAS~~ls~~~~~~l 361 (405)
T 4dio_A 340 NVAGRI-AASASLLYAKNLVTFL 361 (405)
T ss_dssp SGGGGG-HHHHHHHHHHHHHHHH
T ss_pred CCCccC-HHHHHHHHHHHHHHHH
Confidence 346666 8888888877765553
No 44
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.41 E-value=4e-06 Score=77.50 Aligned_cols=173 Identities=12% Similarity=0.133 Sum_probs=107.9
Q ss_pred HHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccc--cce----
Q 024306 29 KIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH--PLN---- 102 (269)
Q Consensus 29 ~~~~~~~~Gi~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~--~~n---- 102 (269)
..+..++.|.++.+...+.. +++++.+.+ .++++++++.-.|..++ .++++..+..|-+-..+ .-|
T Consensus 32 ~~~~L~~~g~ev~~~~~~~~-~~~~~~~~~------~~ad~li~~~~~~~~~~-~~~l~~~p~Lk~i~~~g~G~d~id~~ 103 (351)
T 3jtm_A 32 IRDWLESQGHQYIVTDDKEG-PDCELEKHI------PDLHVLISTPFHPAYVT-AERIKKAKNLKLLLTAGIGSDHIDLQ 103 (351)
T ss_dssp CHHHHHHTTCEEEEESCCSS-TTSHHHHHT------TTCSEEEECTTSCCCBC-HHHHHHCSSCCEEEESSSCCTTBCHH
T ss_pred HHHHHHHCCCEEEEeCCCCC-CHHHHHHHh------CCCEEEEEccCCCCCCC-HHHHhhCCCCeEEEEeCeeecccCHH
Confidence 34567888999887766442 345565554 35677766421233444 35666654444443211 111
Q ss_pred ----ecccccCCCCCcc-ccCCHHHHHHHH----HH--------------------hCCCCccceEEEEcCCcccHHHHH
Q 024306 103 ----IGNLAMRGREPLF-IPCTPKGCIELL----IR--------------------SGVEIMGKNAVVIGRSNIVGLPTS 153 (269)
Q Consensus 103 ----~g~l~~g~~~~~~-~p~t~~g~~~~l----~~--------------------~~~~l~gk~v~ViG~gg~vg~~~a 153 (269)
.|-... +.+++ -.++++-++-++ ++ .+.++.||++.|||.|.+ |+++|
T Consensus 104 ~a~~~gI~V~--n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~I-G~~vA 180 (351)
T 3jtm_A 104 AAAAAGLTVA--EVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRI-GKLLL 180 (351)
T ss_dssp HHHHTTCEEE--ECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHH-HHHHH
T ss_pred HHHhcCeeEE--ECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHH-HHHHH
Confidence 111110 12221 223344333222 11 146799999999999997 99999
Q ss_pred HHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCC-C---CcccCCC---cCCCcEEEEeeecCC
Q 024306 154 LLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV-A---NLVRGSW---LKPGAVVLDVGTCPV 212 (269)
Q Consensus 154 ~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~-p---~~i~~~~---~~~g~vViDv~~~~~ 212 (269)
+.|...|++|+.++++. .++.+.+++||+|+.+++. | +++..+. +++|+++||++....
T Consensus 181 ~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~ 260 (351)
T 3jtm_A 181 QRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAI 260 (351)
T ss_dssp HHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGG
T ss_pred HHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchh
Confidence 99999999999998752 3678889999999999983 2 3565553 689999999996543
No 45
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.40 E-value=2.7e-06 Score=79.42 Aligned_cols=143 Identities=17% Similarity=0.207 Sum_probs=99.7
Q ss_pred HHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC---------CCCHhhhcCCCCEEEeccCC-C----
Q 024306 125 ELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---------TKNPEQITSEADIVIAAAGV-A---- 190 (269)
Q Consensus 125 ~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~---------t~~l~~~~~~aDiVIsAtg~-p---- 190 (269)
.+.++.+.++.||++.|||.|.+ |+++|+.|...|++|..+++. ..++.+.+++||+|+.+++. +
T Consensus 108 ~l~r~~g~~l~gktvGIIGlG~I-G~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~ 186 (381)
T 3oet_A 108 MLAERDGFSLRDRTIGIVGVGNV-GSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPY 186 (381)
T ss_dssp HHHHHTTCCGGGCEEEEECCSHH-HHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTT
T ss_pred HHHHhcCCccCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccc
Confidence 34456788999999999999997 999999999999999999652 23678889999999999872 2
Q ss_pred ---CcccCCC---cCCCcEEEEeeecCCCCCCC----CCCceeec---ccch------HHHhhHcceecccCCcccHHHH
Q 024306 191 ---NLVRGSW---LKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DVCY------EEAMRLASVITPVPGGVGPMTV 251 (269)
Q Consensus 191 ---~~i~~~~---~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dvd~------~~~~~~~~~~tpvpgGvGp~T~ 251 (269)
++++.+. +++|+++||++.....+... ...+++.| ||-. ....+..-.+||-.+|.-.=+.
T Consensus 187 ~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~~i~TPHiag~t~e~~ 266 (381)
T 3oet_A 187 KTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGK 266 (381)
T ss_dssp CCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHSSEECSSCTTCCHHHH
T ss_pred cchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCCEEECCccCcCcHHHH
Confidence 2455543 58999999999765432100 00012322 5521 1223333468999999876666
Q ss_pred HHHHHHHHHHHHHHhCC
Q 024306 252 AMLLSNTLDSAKRAYGF 268 (269)
Q Consensus 252 ~mLl~n~v~a~~~~~~~ 268 (269)
.-+....++.+..|++.
T Consensus 267 ~~~~~~~~~~l~~~l~~ 283 (381)
T 3oet_A 267 ARGTTQVFEAYSAFIGR 283 (381)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 66666677777777653
No 46
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.38 E-value=5.5e-07 Score=86.41 Aligned_cols=82 Identities=22% Similarity=0.297 Sum_probs=70.4
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCCCCcccCC
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLVRGS 196 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~p~~i~~~ 196 (269)
.+..+.||+|+|||.|.+ |+.+|+.|...|++|+++++.. .++.+.+++||+||++++.+++++.+
T Consensus 251 ~~~~l~GktVgIIG~G~I-G~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~~t~~lI~~~ 329 (479)
T 1v8b_A 251 TDFLISGKIVVICGYGDV-GKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNVDVIKLE 329 (479)
T ss_dssp HCCCCTTSEEEEECCSHH-HHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSSSSBCHH
T ss_pred cccccCCCEEEEEeeCHH-HHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECCChhhhcCHH
Confidence 567899999999999886 9999999999999999998763 25678899999999999888888765
Q ss_pred C---cCCCcEEEEeeecCC
Q 024306 197 W---LKPGAVVLDVGTCPV 212 (269)
Q Consensus 197 ~---~~~g~vViDv~~~~~ 212 (269)
+ +|+|++++|++....
T Consensus 330 ~l~~MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 330 HLLKMKNNAVVGNIGHFDD 348 (479)
T ss_dssp HHTTCCTTCEEEECSSTTT
T ss_pred HHhhcCCCcEEEEeCCCCc
Confidence 4 588999999997544
No 47
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=98.36 E-value=8.9e-07 Score=82.49 Aligned_cols=78 Identities=23% Similarity=0.296 Sum_probs=63.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC----------------------------------------
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------------------------- 172 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~---------------------------------------- 172 (269)
.+.|++|+|+|+|.+ |+.+++.+...|++|++++++...
T Consensus 169 ~l~g~~V~ViGaG~i-G~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~ 247 (384)
T 1l7d_A 169 TVPPARVLVFGVGVA-GLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 247 (384)
T ss_dssp EECCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCH
T ss_pred CCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence 678999999999886 999999999999999999865311
Q ss_pred ---HhhhcCCCCEEEecc---CC--CCcccCC---CcCCCcEEEEeeecC
Q 024306 173 ---PEQITSEADIVIAAA---GV--ANLVRGS---WLKPGAVVLDVGTCP 211 (269)
Q Consensus 173 ---l~~~~~~aDiVIsAt---g~--p~~i~~~---~~~~g~vViDv~~~~ 211 (269)
+.+.++.+|+||+++ |. |++++.+ .++++.+|+|+++++
T Consensus 248 ~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~ 297 (384)
T 1l7d_A 248 AEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEA 297 (384)
T ss_dssp HHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGG
T ss_pred HHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCC
Confidence 455678899999999 53 3456554 358899999999865
No 48
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.35 E-value=9e-09 Score=98.67 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=56.7
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhC-CCEEEEEeCCCC----------------------CHhhhcCCCCEEEecc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTK----------------------NPEQITSEADIVIAAA 187 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~-ga~Vti~~~~t~----------------------~l~~~~~~aDiVIsAt 187 (269)
+.++++++|+|+|+|++ |++++..|++. +++|++++|+.. ++.+.++++|+||+++
T Consensus 18 ~~~l~~k~VlIiGAGgi-G~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~t 96 (467)
T 2axq_A 18 EGRHMGKNVLLLGSGFV-AQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLI 96 (467)
T ss_dssp -----CEEEEEECCSTT-HHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECS
T ss_pred ccCCCCCEEEEECChHH-HHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECC
Confidence 45678999999999886 99999999998 678999988621 1234567899999999
Q ss_pred CCC-C-cccCCCcCCCcEEEEeee
Q 024306 188 GVA-N-LVRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 188 g~p-~-~i~~~~~~~g~vViDv~~ 209 (269)
|.. + .+....++.+..++|+.|
T Consensus 97 p~~~~~~v~~a~l~~g~~vvd~~~ 120 (467)
T 2axq_A 97 PYTFHPNVVKSAIRTKTDVVTSSY 120 (467)
T ss_dssp CGGGHHHHHHHHHHHTCEEEECSC
T ss_pred chhhhHHHHHHHHhcCCEEEEeec
Confidence 853 1 134445677889999887
No 49
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.33 E-value=1.3e-06 Score=83.88 Aligned_cols=82 Identities=28% Similarity=0.370 Sum_probs=69.1
Q ss_pred HHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCCCCccc
Q 024306 128 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLVR 194 (269)
Q Consensus 128 ~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~p~~i~ 194 (269)
+..+..+.||+++|+|+|++ |+++|+.|+..|++|.++.+.. .++.+.++.+|+++.++|.++.+.
T Consensus 257 r~tg~~L~GKtVvVtGaGgI-G~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~ 335 (488)
T 3ond_A 257 RATDVMIAGKVAVVAGYGDV-GKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIM 335 (488)
T ss_dssp HHHCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBC
T ss_pred HHcCCcccCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhh
Confidence 45678899999999999975 9999999999999999997752 245667889999999999888776
Q ss_pred CC---CcCCCcEEEEeeec
Q 024306 195 GS---WLKPGAVVLDVGTC 210 (269)
Q Consensus 195 ~~---~~~~g~vViDv~~~ 210 (269)
.+ .++++.+|++++..
T Consensus 336 ~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 336 LDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp HHHHTTSCTTEEEEESSST
T ss_pred HHHHHhcCCCeEEEEcCCC
Confidence 53 46889999999964
No 50
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.30 E-value=7e-06 Score=75.34 Aligned_cols=134 Identities=15% Similarity=0.086 Sum_probs=92.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCCEEEeccCC-C---CcccC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV-A---NLVRG 195 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------~~l~~~~~~aDiVIsAtg~-p---~~i~~ 195 (269)
.++.|+++.|||.|.+ |+++|+.|...|++|+.++++. .++.+.+++||+|+.+++. + +++..
T Consensus 161 ~~l~g~tvgIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~ 239 (335)
T 2g76_A 161 TELNGKTLGILGLGRI-GREVATRMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLND 239 (335)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCH
T ss_pred cCCCcCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCH
Confidence 5789999999999997 9999999999999999998753 1467788999999999984 2 34543
Q ss_pred C---CcCCCcEEEEeeecCCCCCCC----CCCceeec---cc-------chHHHhhHcceecccCCcccHHHHHHHHHHH
Q 024306 196 S---WLKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DV-------CYEEAMRLASVITPVPGGVGPMTVAMLLSNT 258 (269)
Q Consensus 196 ~---~~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dv-------d~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~ 258 (269)
+ .+++++++||++.....+... ...+++-| || +.+-+....-.+||-.+|.-.-+..-+....
T Consensus 240 ~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~ 319 (335)
T 2g76_A 240 NTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEI 319 (335)
T ss_dssp HHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHHHHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHHHHHHHHHH
Confidence 3 578999999999765433110 00012222 33 2122223356689988988766665556666
Q ss_pred HHHHHHHh
Q 024306 259 LDSAKRAY 266 (269)
Q Consensus 259 v~a~~~~~ 266 (269)
++..++|+
T Consensus 320 ~~nl~~~~ 327 (335)
T 2g76_A 320 AVQFVDMV 327 (335)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 66555553
No 51
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.28 E-value=1.9e-05 Score=74.53 Aligned_cols=222 Identities=18% Similarity=0.158 Sum_probs=129.2
Q ss_pred HHHHHcCC-eEEEEEcCCCCCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccc-cce------
Q 024306 31 KACEEVGI-KSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH-PLN------ 102 (269)
Q Consensus 31 ~~~~~~Gi-~~~~~~~~~~~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~-~~n------ 102 (269)
..+++.|. ++++. +...+++++.+.+ .+++++.+... ..++ .++++..+..|-|-..+ -+|
T Consensus 30 ~~l~~~g~~~v~~~--~~~~~~~~l~~~~------~~~d~l~v~~~--~~i~-~~~l~~~p~Lk~I~~~~~G~d~IDl~~ 98 (416)
T 3k5p_A 30 EYFKSSGYTNVTHL--PKALDKADLIKAI------SSAHIIGIRSR--TQLT-EEIFAAANRLIAVGCFSVGTNQVELKA 98 (416)
T ss_dssp HHHHHTTCCCEEEC--SSCCCHHHHHHHH------TTCSEEEECSS--CCBC-HHHHHHCTTCCEEEECSSCCTTBCHHH
T ss_pred HHHHHCCCcEEEEC--CCCCCHHHHHHHc------cCCEEEEEcCC--CCCC-HHHHHhCCCcEEEEECccccCccCHHH
Confidence 45667787 66553 3445678877766 34677776542 2233 46777665555553321 111
Q ss_pred ---ecccccCCCCCcc-ccCCHHHHHHHHH----H------------------hCCCCccceEEEEcCCcccHHHHHHHH
Q 024306 103 ---IGNLAMRGREPLF-IPCTPKGCIELLI----R------------------SGVEIMGKNAVVIGRSNIVGLPTSLLL 156 (269)
Q Consensus 103 ---~g~l~~g~~~~~~-~p~t~~g~~~~l~----~------------------~~~~l~gk~v~ViG~gg~vg~~~a~~L 156 (269)
.|-.. - +.+++ -.++++-++.++- + .+.++.||++.|||.|.+ |+++|+.|
T Consensus 99 a~~~GI~V-~-n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~I-G~~vA~~l 175 (416)
T 3k5p_A 99 ARKRGIPV-F-NAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNI-GSQVGNLA 175 (416)
T ss_dssp HHHTTCCE-E-CCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHH-HHHHHHHH
T ss_pred HHhcCcEE-E-eCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHH-HHHHHHHH
Confidence 11111 0 12221 1123333322221 0 146789999999999997 99999999
Q ss_pred HhCCCEEEEEeCCC----------CCHhhhcCCCCEEEeccCC----CCcccCCC---cCCCcEEEEeeecCCCCCCC--
Q 024306 157 QRHHATVSIVHALT----------KNPEQITSEADIVIAAAGV----ANLVRGSW---LKPGAVVLDVGTCPVDDPSC-- 217 (269)
Q Consensus 157 ~~~ga~Vti~~~~t----------~~l~~~~~~aDiVIsAtg~----p~~i~~~~---~~~g~vViDv~~~~~~~~~~-- 217 (269)
...|++|+.+++.. .++.+.+++||+|+..++. .+++..+. +|+|+++||++.....+...
T Consensus 176 ~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~ 255 (416)
T 3k5p_A 176 ESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALA 255 (416)
T ss_dssp HHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHH
T ss_pred HHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHH
Confidence 99999999998642 3578889999999999984 24566553 68999999999765433100
Q ss_pred --CCCceee---cccchHH------------HhhHcceecccCCcccHHHHHHHHHHHHHHHHHHh
Q 024306 218 --EYGYRLM---GDVCYEE------------AMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 218 --~~~~~l~---GDvd~~~------------~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
...+++. =||-..+ ..-..-.+||-.||.-.-+..-+....++....|+
T Consensus 256 ~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l 321 (416)
T 3k5p_A 256 KVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYS 321 (416)
T ss_dssp HHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0001222 1331110 11123467888888866555555555555555443
No 52
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.27 E-value=8.5e-06 Score=75.64 Aligned_cols=134 Identities=13% Similarity=0.143 Sum_probs=89.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCCEEEeccCC----CCcccC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV----ANLVRG 195 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------~~l~~~~~~aDiVIsAtg~----p~~i~~ 195 (269)
.++.||++.|||.|.+ |+++|+.|...|++|+.+++.. .++.+.+++||+|+.+++. .+++..
T Consensus 172 ~~l~gktvGIIGlG~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~ 250 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDL-GKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGA 250 (365)
T ss_dssp CCSSSSEEEEECCSHH-HHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCH
T ss_pred cccCCCEEEEecCCcc-cHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCH
Confidence 4688999999999997 9999999999999999998752 2567889999999999883 235655
Q ss_pred C---CcCCCcEEEEeeecCCCCCCC----CCCcee--eccc--------chHHHhhHcceecccCCcccHHHHHHHHHHH
Q 024306 196 S---WLKPGAVVLDVGTCPVDDPSC----EYGYRL--MGDV--------CYEEAMRLASVITPVPGGVGPMTVAMLLSNT 258 (269)
Q Consensus 196 ~---~~~~g~vViDv~~~~~~~~~~----~~~~~l--~GDv--------d~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~ 258 (269)
+ .+++|+++||++.....+... ...+++ .=|| |..-..-..-.+||-.||.-.-+...+....
T Consensus 251 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~ 330 (365)
T 4hy3_A 251 EAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMV 330 (365)
T ss_dssp HHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHH
T ss_pred HHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHHHHH
Confidence 5 368999999999332211000 000000 0011 0001111245689999998777777777777
Q ss_pred HHHHHHHh
Q 024306 259 LDSAKRAY 266 (269)
Q Consensus 259 v~a~~~~~ 266 (269)
++..+.|+
T Consensus 331 ~~ni~~~~ 338 (365)
T 4hy3_A 331 LEDMDLMD 338 (365)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77666664
No 53
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.27 E-value=5.4e-06 Score=76.63 Aligned_cols=135 Identities=13% Similarity=0.117 Sum_probs=92.7
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCC----CCcc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV----ANLV 193 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~----p~~i 193 (269)
+.++.||++.|||.|.+ |+++|+.|...|++|+.++++. .++.+.+++||+|+.+++. .+++
T Consensus 155 ~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li 233 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKI-GQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSII 233 (352)
T ss_dssp BCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred CccCCCCEEEEEeECHH-HHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhh
Confidence 35689999999999997 9999999999999999997641 3678889999999999883 2355
Q ss_pred cCC---CcCCCcEEEEeeecCCCCCCCC----CCceeec---cc--------chHHHhhHcceecccCCcccHHHHHHHH
Q 024306 194 RGS---WLKPGAVVLDVGTCPVDDPSCE----YGYRLMG---DV--------CYEEAMRLASVITPVPGGVGPMTVAMLL 255 (269)
Q Consensus 194 ~~~---~~~~g~vViDv~~~~~~~~~~~----~~~~l~G---Dv--------d~~~~~~~~~~~tpvpgGvGp~T~~mLl 255 (269)
..+ .+++|+++||++.....+.... ..+++.| || |..-+.-..-.+||-.||.-.-+...+.
T Consensus 234 ~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~ 313 (352)
T 3gg9_A 234 TVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYF 313 (352)
T ss_dssp CHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHH
T ss_pred CHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHH
Confidence 544 4689999999995443221100 0001111 21 1111122345689999998877777777
Q ss_pred HHHHHHHHHHh
Q 024306 256 SNTLDSAKRAY 266 (269)
Q Consensus 256 ~n~v~a~~~~~ 266 (269)
...++..+.|+
T Consensus 314 ~~~~~ni~~~~ 324 (352)
T 3gg9_A 314 GIAFQNILDIL 324 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777776664
No 54
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.26 E-value=4.4e-06 Score=77.02 Aligned_cols=135 Identities=15% Similarity=0.154 Sum_probs=92.3
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCCEEEeccCC----CCccc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV----ANLVR 194 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------~~l~~~~~~aDiVIsAtg~----p~~i~ 194 (269)
+.++.||++.|||.|.+ |+++|+.|...|++|..++++. .++.+.+++||+|+.+++. .+++.
T Consensus 168 g~~l~gktvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~ 246 (345)
T 4g2n_A 168 GMGLTGRRLGIFGMGRI-GRAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLD 246 (345)
T ss_dssp BCCCTTCEEEEESCSHH-HHHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBC
T ss_pred ccccCCCEEEEEEeChh-HHHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhC
Confidence 35789999999999997 9999999999999999998763 3677889999999999984 24566
Q ss_pred CCC---cCCCcEEEEeeecCCCCCCCC----CCceeec---ccc-------hHHHhhHcceecccCCcccHHHHHHHHHH
Q 024306 195 GSW---LKPGAVVLDVGTCPVDDPSCE----YGYRLMG---DVC-------YEEAMRLASVITPVPGGVGPMTVAMLLSN 257 (269)
Q Consensus 195 ~~~---~~~g~vViDv~~~~~~~~~~~----~~~~l~G---Dvd-------~~~~~~~~~~~tpvpgGvGp~T~~mLl~n 257 (269)
.+. +++|+++||++.....+.... ..+++.| ||- ..-..-..-.+||-.||.-.-+..-+...
T Consensus 247 ~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~ 326 (345)
T 4g2n_A 247 HDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHETRDAMGWL 326 (345)
T ss_dssp HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHHHHHHHHHH
Confidence 553 689999999996543221000 0012332 331 11111124568888888876666666666
Q ss_pred HHHHHHHHh
Q 024306 258 TLDSAKRAY 266 (269)
Q Consensus 258 ~v~a~~~~~ 266 (269)
.++..++|+
T Consensus 327 ~~~ni~~~l 335 (345)
T 4g2n_A 327 LIQGIEALN 335 (345)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665554
No 55
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.25 E-value=6.5e-07 Score=84.10 Aligned_cols=77 Identities=21% Similarity=0.270 Sum_probs=61.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------------------------C
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------------------N 172 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------------------------------~ 172 (269)
+.|++|+|+|+|.+ |+.+++.+...|++|++++++.. .
T Consensus 170 l~g~~V~ViGaG~i-G~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 170 VPPAKVMVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp ECCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred cCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 67999999999886 99999999999999999987521 1
Q ss_pred HhhhcCCCCEEEeccCC-----CCcccCCC---cCCCcEEEEeeecC
Q 024306 173 PEQITSEADIVIAAAGV-----ANLVRGSW---LKPGAVVLDVGTCP 211 (269)
Q Consensus 173 l~~~~~~aDiVIsAtg~-----p~~i~~~~---~~~g~vViDv~~~~ 211 (269)
+.+.++.+|+||++++. |.+++.++ +++|.+|+|+++++
T Consensus 249 l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~ 295 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQN 295 (401)
T ss_dssp HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCC
Confidence 44566789999999643 35566554 57899999999764
No 56
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.23 E-value=9.4e-06 Score=74.67 Aligned_cols=134 Identities=21% Similarity=0.240 Sum_probs=86.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCCEEEeccCC----CCcccCC--
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV----ANLVRGS-- 196 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------~~l~~~~~~aDiVIsAtg~----p~~i~~~-- 196 (269)
.++.||++.|||.|.+ |+++|+.|...|++|+.++++. .++.+.+++||+|+.+++. .+++..+
T Consensus 167 ~~l~gktiGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l 245 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQI-GRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLL 245 (340)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHH
T ss_pred ccccCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHH
Confidence 5789999999999997 9999999999999999998763 3678889999999999883 2345544
Q ss_pred -CcCCCcEEEEeeecCCCCCCC----CCCceeec---ccch-------HHHhhHcceecccCCcccHHHHHHHHHHHHHH
Q 024306 197 -WLKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DVCY-------EEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 261 (269)
Q Consensus 197 -~~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dvd~-------~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a 261 (269)
.+++++++||++.....+... ...+++.| ||-. +-+.-..-.+||-.||.-.-+..-+....++.
T Consensus 246 ~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~n 325 (340)
T 4dgs_A 246 QALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMAMGKLVLAN 325 (340)
T ss_dssp HHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHH
Confidence 368999999998665433110 00112322 4421 11111234789888988766555555555555
Q ss_pred HHHHh
Q 024306 262 AKRAY 266 (269)
Q Consensus 262 ~~~~~ 266 (269)
.++|+
T Consensus 326 l~~~~ 330 (340)
T 4dgs_A 326 LAAHF 330 (340)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 57
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.21 E-value=1e-05 Score=73.34 Aligned_cols=133 Identities=21% Similarity=0.226 Sum_probs=90.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------CHhhhcCCCCEEEeccCC----CCcccC---CC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------NPEQITSEADIVIAAAGV----ANLVRG---SW 197 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------~l~~~~~~aDiVIsAtg~----p~~i~~---~~ 197 (269)
.++.|+++.|||.|.+ |+++++.|...|++|++++++.. ++.+.+++||+|+.+++. .+++.. ..
T Consensus 140 ~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~ 218 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGRI-GQAVAKRALAFGMRVVYHARTPKPLPYPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFA 218 (311)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSSSSCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTT
T ss_pred cCCCCCEEEEEEECHH-HHHHHHHHHHCCCEEEEECCCCcccccccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhh
Confidence 4689999999999997 99999999999999999987642 577889999999999874 234543 25
Q ss_pred cCCCcEEEEeeecCCCCCC----CCCCceeec---ccc--------hHHHhhHcceecccCCcccHHHHHHHHHHHHHHH
Q 024306 198 LKPGAVVLDVGTCPVDDPS----CEYGYRLMG---DVC--------YEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 198 ~~~g~vViDv~~~~~~~~~----~~~~~~l~G---Dvd--------~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~ 262 (269)
+++++++||++.....+.. ... +++-| ||- .+-+....-.+||-.+|.-.-+..-+....++..
T Consensus 219 mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl 297 (311)
T 2cuk_A 219 MKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENL 297 (311)
T ss_dssp SCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHH
Confidence 7899999999976543210 000 12211 221 1112223567888888886665555566666555
Q ss_pred HHHh
Q 024306 263 KRAY 266 (269)
Q Consensus 263 ~~~~ 266 (269)
++|+
T Consensus 298 ~~~~ 301 (311)
T 2cuk_A 298 LAVL 301 (311)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5553
No 58
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.19 E-value=9.2e-06 Score=75.81 Aligned_cols=143 Identities=17% Similarity=0.145 Sum_probs=96.2
Q ss_pred HHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC---------CCCHhhhcCCCCEEEeccCC-C---
Q 024306 124 IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---------TKNPEQITSEADIVIAAAGV-A--- 190 (269)
Q Consensus 124 ~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~---------t~~l~~~~~~aDiVIsAtg~-p--- 190 (269)
+.+.++.+.++.|+++.|||.|.+ |+++|+.|...|++|+.+++. ..++.+.+++||+|+.+++. +
T Consensus 104 L~l~r~~~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~ 182 (380)
T 2o4c_A 104 LAMAEVRGADLAERTYGVVGAGQV-GGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGE 182 (380)
T ss_dssp HHHHHHHTCCGGGCEEEEECCSHH-HHHHHHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSSS
T ss_pred HHHHhhhhcccCCCEEEEEeCCHH-HHHHHHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCccccc
Confidence 334455688999999999999996 999999999999999998642 23577888999999998872 2
Q ss_pred ----CcccCC---CcCCCcEEEEeeecCCCCCCC----CCCce---eecccch------HHHhhHcceecccCCcccHHH
Q 024306 191 ----NLVRGS---WLKPGAVVLDVGTCPVDDPSC----EYGYR---LMGDVCY------EEAMRLASVITPVPGGVGPMT 250 (269)
Q Consensus 191 ----~~i~~~---~~~~g~vViDv~~~~~~~~~~----~~~~~---l~GDvd~------~~~~~~~~~~tpvpgGvGp~T 250 (269)
++++.+ .+++|+++||++.....+... ...++ ..=||-. ....+..-.+||-.+|.-.-+
T Consensus 183 ~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~~nvi~TPHiag~t~e~ 262 (380)
T 2o4c_A 183 HPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAARCLIATPHIAGYSLEG 262 (380)
T ss_dssp SCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHTTCSEECSSCTTCCHHH
T ss_pred cchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhccCCEEEccccCcCCHHH
Confidence 345543 468999999999765433100 00001 1223310 112223446899999987766
Q ss_pred HHHHHHHHHHHHHHHhC
Q 024306 251 VAMLLSNTLDSAKRAYG 267 (269)
Q Consensus 251 ~~mLl~n~v~a~~~~~~ 267 (269)
..-...+.++...+|++
T Consensus 263 ~~~~~~~~~~nl~~~l~ 279 (380)
T 2o4c_A 263 KLRGTAQIYQAYCAWRG 279 (380)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 66666666666666553
No 59
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.16 E-value=8.1e-07 Score=82.40 Aligned_cols=117 Identities=20% Similarity=0.206 Sum_probs=78.4
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------CCHhhhcCCCCEEEeccCC
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
+.++=.+++|+|+|+|++ |++++..|.+. .+|++++|+. .++.+.++++|+||++++.
T Consensus 10 ~~~~~~~~~v~IiGaG~i-G~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~ 87 (365)
T 2z2v_A 10 HHIEGRHMKVLILGAGNI-GRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPG 87 (365)
T ss_dssp ------CCEEEEECCSHH-HHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCH
T ss_pred ccccCCCCeEEEEcCCHH-HHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCCh
Confidence 345567899999999987 99999999988 8899998862 1245667899999999873
Q ss_pred C-C-cccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccCC-cccHHHHHHHHHHHHHH
Q 024306 190 A-N-LVRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVPG-GVGPMTVAMLLSNTLDS 261 (269)
Q Consensus 190 p-~-~i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvpg-GvGp~T~~mLl~n~v~a 261 (269)
. + .+-...++.|..++|+.+.+.++ ..+. +.+++++... ++| |.-|--..|+...++..
T Consensus 88 ~~~~~v~~a~l~~G~~~vD~s~~~~~~------~~l~------~~Ak~aG~~~-l~g~G~dPG~~~~~a~~~~~~ 149 (365)
T 2z2v_A 88 FLGFKSIKAAIKSKVDMVDVSFMPENP------LELR------DEAEKAQVTI-VFDAGFAPGLSNILMGRIFQE 149 (365)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCCSSCG------GGGH------HHHHHTTCEE-ECSCBTTTBHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhCCeEEEccCCcHHH------HHHH------HHHHHcCCEE-EECCCCcchHHHHHHHHHHHh
Confidence 2 1 14455678899999999875432 0233 4466666533 332 45566667777766554
No 60
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.16 E-value=5.2e-06 Score=75.90 Aligned_cols=81 Identities=20% Similarity=0.306 Sum_probs=66.6
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCCEEEeccCC----CCccc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV----ANLVR 194 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------~~l~~~~~~aDiVIsAtg~----p~~i~ 194 (269)
+.++.||++.|||.|.+ |+++|+.|...|++|+.++++. .++.+.+++||+|+.+++. .+++.
T Consensus 135 ~~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~ 213 (324)
T 3hg7_A 135 YQGLKGRTLLILGTGSI-GQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFT 213 (324)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBC
T ss_pred CcccccceEEEEEECHH-HHHHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhH
Confidence 45789999999999997 9999999999999999998753 2467789999999999883 23565
Q ss_pred CCC---cCCCcEEEEeeecCC
Q 024306 195 GSW---LKPGAVVLDVGTCPV 212 (269)
Q Consensus 195 ~~~---~~~g~vViDv~~~~~ 212 (269)
.+. +++|+++||++....
T Consensus 214 ~~~l~~mk~gailIN~aRG~~ 234 (324)
T 3hg7_A 214 ASRFEHCKPGAILFNVGRGNA 234 (324)
T ss_dssp TTTTTCSCTTCEEEECSCGGG
T ss_pred HHHHhcCCCCcEEEECCCchh
Confidence 554 588999999996654
No 61
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.13 E-value=3.7e-06 Score=76.59 Aligned_cols=81 Identities=14% Similarity=0.107 Sum_probs=66.1
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------CHhhhcCCCCEEEeccCC----CCccc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGV----ANLVR 194 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------~l~~~~~~aDiVIsAtg~----p~~i~ 194 (269)
+.++.||++.|||.|.+ |+++|+.|...|++|+.++++.. ++.+.+++||+|+.+++. .+++.
T Consensus 134 ~~~l~g~tvGIiG~G~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~ 212 (315)
T 3pp8_A 134 EYTREEFSVGIMGAGVL-GAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIIN 212 (315)
T ss_dssp CCCSTTCCEEEECCSHH-HHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBS
T ss_pred CCCcCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhcc
Confidence 35789999999999997 99999999999999999987632 467788999999999883 33565
Q ss_pred CC---CcCCCcEEEEeeecCC
Q 024306 195 GS---WLKPGAVVLDVGTCPV 212 (269)
Q Consensus 195 ~~---~~~~g~vViDv~~~~~ 212 (269)
.+ .+++|+++||++....
T Consensus 213 ~~~l~~mk~gailIN~aRG~~ 233 (315)
T 3pp8_A 213 SELLDQLPDGAYVLNLARGVH 233 (315)
T ss_dssp HHHHTTSCTTEEEEECSCGGG
T ss_pred HHHHhhCCCCCEEEECCCChh
Confidence 44 4689999999996543
No 62
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.12 E-value=5.6e-06 Score=75.24 Aligned_cols=75 Identities=21% Similarity=0.305 Sum_probs=61.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHh-CC-CEEEEEeCCCC-------------------CHhhhcCCCCEEEeccCCCCc
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALTK-------------------NPEQITSEADIVIAAAGVANL 192 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~-~g-a~Vti~~~~t~-------------------~l~~~~~~aDiVIsAtg~p~~ 192 (269)
-..++++|||+|.. |+..+..|.. ++ .+|++++|+ + ++++.+++|||||++|+...+
T Consensus 119 ~~~~~v~iIGaG~~-a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~~p 196 (313)
T 3hdj_A 119 PRSSVLGLFGAGTQ-GAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRSTTP 196 (313)
T ss_dssp TTCCEEEEECCSHH-HHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCSSC
T ss_pred CCCcEEEEECccHH-HHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCCCc
Confidence 35789999999997 9999998876 34 479999987 2 234556789999999997654
Q ss_pred -ccCCCcCCCcEEEEeeec
Q 024306 193 -VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 193 -i~~~~~~~g~vViDv~~~ 210 (269)
++.+|+++|++|+|+|..
T Consensus 197 vl~~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 197 LFAGQALRAGAFVGAIGSS 215 (313)
T ss_dssp SSCGGGCCTTCEEEECCCS
T ss_pred ccCHHHcCCCcEEEECCCC
Confidence 788999999999999975
No 63
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.12 E-value=1.1e-05 Score=73.92 Aligned_cols=135 Identities=16% Similarity=0.176 Sum_probs=92.4
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------CHhhhcCCCCEEEeccCC----CCcccC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------NPEQITSEADIVIAAAGV----ANLVRG 195 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------~l~~~~~~aDiVIsAtg~----p~~i~~ 195 (269)
+.++.|+++.|||.|.+ |+++|+.|...|++|+.++++.. ++.+.+++||+|+.+++. .+++..
T Consensus 136 ~~~l~g~tvgIiG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~ 214 (334)
T 2pi1_A 136 ARELNRLTLGVIGTGRI-GSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINE 214 (334)
T ss_dssp BCCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred ceeccCceEEEECcCHH-HHHHHHHHHHCcCEEEEECCCcchhhHhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCH
Confidence 45789999999999997 99999999999999999987632 467788999999999883 235655
Q ss_pred C---CcCCCcEEEEeeecCCCCCCC----CCCceeec---ccchHH-H----------------hh------Hcceeccc
Q 024306 196 S---WLKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DVCYEE-A----------------MR------LASVITPV 242 (269)
Q Consensus 196 ~---~~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dvd~~~-~----------------~~------~~~~~tpv 242 (269)
+ .+++|+++||++.....+... ...+++.| ||-..+ . .+ ..-.+||-
T Consensus 215 ~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPH 294 (334)
T 2pi1_A 215 ERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPH 294 (334)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCS
T ss_pred HHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCc
Confidence 4 368999999999655322100 00013333 443211 1 11 24568998
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHh
Q 024306 243 PGGVGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 243 pgGvGp~T~~mLl~n~v~a~~~~~ 266 (269)
.+|.-.-+..-+....++..++|+
T Consensus 295 ia~~t~e~~~~~~~~~~~ni~~~~ 318 (334)
T 2pi1_A 295 IAYYTDKSLERIREETVKVVKAFV 318 (334)
T ss_dssp CTTCBHHHHHHHHHHHHHHHHHHH
T ss_pred cccChHHHHHHHHHHHHHHHHHHH
Confidence 888877666666666666665543
No 64
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.12 E-value=4e-06 Score=76.63 Aligned_cols=134 Identities=16% Similarity=0.133 Sum_probs=88.4
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCCEEEeccCC----CCccc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV----ANLVR 194 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------~~l~~~~~~aDiVIsAtg~----p~~i~ 194 (269)
+.++.||++.|||.|.+ |+++|+.|...|++|+.++++. .++.+.+++||+|+.+++. .+++.
T Consensus 132 ~~~l~gktvGIiGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~ 210 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQI-GQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFS 210 (324)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBS
T ss_pred CccccCCeEEEECcCHH-HHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcC
Confidence 56789999999999997 9999999999999999998753 1456788999999999883 33565
Q ss_pred CC---CcCCCcEEEEeeecCCCCCCC----CCCceeec---ccchH--------HHhhHcceecccCCcccHHHHHHHHH
Q 024306 195 GS---WLKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DVCYE--------EAMRLASVITPVPGGVGPMTVAMLLS 256 (269)
Q Consensus 195 ~~---~~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dvd~~--------~~~~~~~~~tpvpgGvGp~T~~mLl~ 256 (269)
.+ .+++|+++||++.....+... ...+++.| ||-.. -+.-..-.+||-.+|.-.-+..-+..
T Consensus 211 ~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~~~~ 290 (324)
T 3evt_A 211 TELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRATVFP 290 (324)
T ss_dssp HHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHHHHH
T ss_pred HHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHHHHH
Confidence 54 368999999999654322100 00012222 33211 11112346788888886544455555
Q ss_pred HHHHHHHHH
Q 024306 257 NTLDSAKRA 265 (269)
Q Consensus 257 n~v~a~~~~ 265 (269)
..++..++|
T Consensus 291 ~~~~nl~~~ 299 (324)
T 3evt_A 291 IFAANFAQF 299 (324)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555544
No 65
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.10 E-value=6.1e-06 Score=76.70 Aligned_cols=78 Identities=31% Similarity=0.413 Sum_probs=61.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcCCCCEEEeccCCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~p~ 191 (269)
.+.|++|+|+|+|++ |+.+++.+...|++|++++++.. ++.+.++++|+||++++.|.
T Consensus 165 ~l~g~~V~ViG~G~i-G~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~ 243 (377)
T 2vhw_A 165 GVEPADVVVIGAGTA-GYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG 243 (377)
T ss_dssp TBCCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred CCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC
Confidence 478999999999886 99999999999999999986521 13345678999999997553
Q ss_pred -----cccCC---CcCCCcEEEEeeecC
Q 024306 192 -----LVRGS---WLKPGAVVLDVGTCP 211 (269)
Q Consensus 192 -----~i~~~---~~~~g~vViDv~~~~ 211 (269)
++..+ .++++.+++|++..+
T Consensus 244 ~~t~~li~~~~l~~mk~g~~iV~va~~~ 271 (377)
T 2vhw_A 244 AKAPKLVSNSLVAHMKPGAVLVDIAIDQ 271 (377)
T ss_dssp SCCCCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred CCCcceecHHHHhcCCCCcEEEEEecCC
Confidence 34433 468899999999754
No 66
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.10 E-value=5.6e-06 Score=79.79 Aligned_cols=81 Identities=22% Similarity=0.323 Sum_probs=67.3
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCCCCcccC-
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLVRG- 195 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~p~~i~~- 195 (269)
.+..+.|++|+|+|.|.+ |+.+++.|...|++|+++++.. .++.+.++++|+||.++|.++.+..
T Consensus 268 ~~~~l~GktV~IiG~G~I-G~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atgt~~~i~~~ 346 (494)
T 3ce6_A 268 TDALIGGKKVLICGYGDV-GKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLE 346 (494)
T ss_dssp HCCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSSSSCSBCHH
T ss_pred cCCCCCcCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCCCHHHHHHH
Confidence 345789999999999886 9999999999999999998653 2355678899999999998887764
Q ss_pred --CCcCCCcEEEEeeecC
Q 024306 196 --SWLKPGAVVLDVGTCP 211 (269)
Q Consensus 196 --~~~~~g~vViDv~~~~ 211 (269)
+.++++.++++++...
T Consensus 347 ~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 347 HIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp HHHHSCTTCEEEECSSSG
T ss_pred HHHhcCCCcEEEEeCCCC
Confidence 3478999999999754
No 67
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.10 E-value=4.4e-06 Score=75.25 Aligned_cols=79 Identities=16% Similarity=0.268 Sum_probs=65.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCCEEEeccCC-C---CcccCC--
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV-A---NLVRGS-- 196 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------~~l~~~~~~aDiVIsAtg~-p---~~i~~~-- 196 (269)
.++.||++.|||.|.+ |+++|+.|...|++|+.++++. .++.+.+++||+|+.+++. + +++..+
T Consensus 118 ~~l~g~tvGIIGlG~I-G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l 196 (290)
T 3gvx_A 118 TLLYGKALGILGYGGI-GRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLL 196 (290)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHH
T ss_pred eeeecchheeeccCch-hHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHH
Confidence 3589999999999997 9999999999999999998763 3678889999999999983 3 345443
Q ss_pred -CcCCCcEEEEeeecC
Q 024306 197 -WLKPGAVVLDVGTCP 211 (269)
Q Consensus 197 -~~~~g~vViDv~~~~ 211 (269)
.+++|+++||++...
T Consensus 197 ~~mk~gailIN~aRG~ 212 (290)
T 3gvx_A 197 ANARKNLTIVNVARAD 212 (290)
T ss_dssp TTCCTTCEEEECSCGG
T ss_pred hhhhcCceEEEeehhc
Confidence 478999999999654
No 68
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.09 E-value=1.9e-05 Score=71.48 Aligned_cols=134 Identities=18% Similarity=0.217 Sum_probs=92.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------CHhhhcCCCCEEEeccCC-C---CcccC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGV-A---NLVRG 195 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------~l~~~~~~aDiVIsAtg~-p---~~i~~ 195 (269)
.++.|+++.|||.|.+ |+++|+.|...|++|+.++++.. ++.+.+++||+|+.+++. + +++..
T Consensus 138 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~ 216 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRI-GYQVAKIANALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINE 216 (307)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCH
T ss_pred cccCCceEEEEccCHH-HHHHHHHHHHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCH
Confidence 4789999999999997 99999999999999999987642 466778899999999983 2 34654
Q ss_pred C---CcCCCcEEEEeeecCCCCCCC----CCCceeec---cc--------chHHHhhHcceecccCCcccHHHHHHHHHH
Q 024306 196 S---WLKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DV--------CYEEAMRLASVITPVPGGVGPMTVAMLLSN 257 (269)
Q Consensus 196 ~---~~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dv--------d~~~~~~~~~~~tpvpgGvGp~T~~mLl~n 257 (269)
+ .+++|+++||++.....+... ...+++-| || |.+-+....-.+||-.+|.-.-+..-+...
T Consensus 217 ~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~ 296 (307)
T 1wwk_A 217 ERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGVE 296 (307)
T ss_dssp HHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHHHHH
T ss_pred HHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHHHHH
Confidence 3 468999999999765432100 00001211 22 111122235678999998877666666666
Q ss_pred HHHHHHHHh
Q 024306 258 TLDSAKRAY 266 (269)
Q Consensus 258 ~v~a~~~~~ 266 (269)
.++..++|+
T Consensus 297 ~~~nl~~~~ 305 (307)
T 1wwk_A 297 VAEKVVKIL 305 (307)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666654
No 69
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.09 E-value=1.8e-05 Score=72.30 Aligned_cols=134 Identities=19% Similarity=0.177 Sum_probs=89.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------CHhhhcCCCCEEEeccCCC----CcccC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGVA----NLVRG 195 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------~l~~~~~~aDiVIsAtg~p----~~i~~ 195 (269)
.++.|+++.|||.|.+ |+++|..|...|++|++++++.. ++.+.+++||+||.+++.. +++..
T Consensus 146 ~~l~g~~vgIIG~G~i-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~ 224 (334)
T 2dbq_A 146 YDVYGKTIGIIGLGRI-GQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINE 224 (334)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred cCCCCCEEEEEccCHH-HHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCH
Confidence 4789999999999886 99999999999999999987632 4567788999999999843 34543
Q ss_pred ---CCcCCCcEEEEeeecCCCCCCC----CCCceeec---ccc-------hHHHhhHcceecccCCcccHHHHHHHHHHH
Q 024306 196 ---SWLKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DVC-------YEEAMRLASVITPVPGGVGPMTVAMLLSNT 258 (269)
Q Consensus 196 ---~~~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dvd-------~~~~~~~~~~~tpvpgGvGp~T~~mLl~n~ 258 (269)
..+++++++||++.....+... ...+++.| ||- ..-+.-..-.+||-.||.-.-+..-+....
T Consensus 225 ~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~ 304 (334)
T 2dbq_A 225 ERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGAREGMAELV 304 (334)
T ss_dssp HHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHH
T ss_pred HHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHHHHHHHHH
Confidence 3468999999998654322000 00012222 331 111222345678888887666655666666
Q ss_pred HHHHHHHh
Q 024306 259 LDSAKRAY 266 (269)
Q Consensus 259 v~a~~~~~ 266 (269)
++..++|+
T Consensus 305 ~~n~~~~~ 312 (334)
T 2dbq_A 305 AKNLIAFK 312 (334)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655553
No 70
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.09 E-value=8.1e-06 Score=73.84 Aligned_cols=79 Identities=25% Similarity=0.307 Sum_probs=65.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------CCHhhhcCCCCEEEeccCC----CCcccCC---C
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------KNPEQITSEADIVIAAAGV----ANLVRGS---W 197 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------~~l~~~~~~aDiVIsAtg~----p~~i~~~---~ 197 (269)
++.|+++.|||.|.+ |+++|+.|...|++|+.++++. .++.+.+++||+|+.+++. .+++..+ .
T Consensus 121 ~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~ 199 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEI-GTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLAL 199 (303)
T ss_dssp CCTTCEEEEESCSTH-HHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred CCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCccccCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhh
Confidence 689999999999997 9999999999999999998653 2567889999999999984 2345533 4
Q ss_pred cCCCcEEEEeeecCC
Q 024306 198 LKPGAVVLDVGTCPV 212 (269)
Q Consensus 198 ~~~g~vViDv~~~~~ 212 (269)
+++|+++||++....
T Consensus 200 mk~gailin~srg~~ 214 (303)
T 1qp8_A 200 MAEDAVFVNVGRAEV 214 (303)
T ss_dssp SCTTCEEEECSCGGG
T ss_pred CCCCCEEEECCCCcc
Confidence 689999999997654
No 71
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.07 E-value=4.7e-06 Score=76.79 Aligned_cols=134 Identities=19% Similarity=0.147 Sum_probs=91.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------CHhhhcCCCCEEEeccCC----CCcccCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------NPEQITSEADIVIAAAGV----ANLVRGSW 197 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------~l~~~~~~aDiVIsAtg~----p~~i~~~~ 197 (269)
.++.||++.|||.|.+ |+++|+.|...|++|+.++++.. ++.+.+++||+|+.+++. .+++..+.
T Consensus 144 ~~l~gktvgIiGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~ 222 (343)
T 2yq5_A 144 NEIYNLTVGLIGVGHI-GSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQ 222 (343)
T ss_dssp CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHH
T ss_pred cccCCCeEEEEecCHH-HHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHH
Confidence 3678999999999997 99999999999999999987632 467888999999999983 33565553
Q ss_pred ---cCCCcEEEEeeecCCCCCCCC----CCcee---ecccchHH---------------------HhhHcceecccCCcc
Q 024306 198 ---LKPGAVVLDVGTCPVDDPSCE----YGYRL---MGDVCYEE---------------------AMRLASVITPVPGGV 246 (269)
Q Consensus 198 ---~~~g~vViDv~~~~~~~~~~~----~~~~l---~GDvd~~~---------------------~~~~~~~~tpvpgGv 246 (269)
+++|+++||++.....+.... ..+++ .=||-..+ ..-..-.+||-.||.
T Consensus 223 l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~ 302 (343)
T 2yq5_A 223 LKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFY 302 (343)
T ss_dssp HHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTC
T ss_pred HhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccc
Confidence 689999999996543221000 00011 11332111 111244588888888
Q ss_pred cHHHHHHHHHHHHHHHHHHh
Q 024306 247 GPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 247 Gp~T~~mLl~n~v~a~~~~~ 266 (269)
-.-+..-+....++..+.|+
T Consensus 303 t~ea~~~~~~~~~~ni~~~l 322 (343)
T 2yq5_A 303 TETSIRNMVQICLTDQLTIA 322 (343)
T ss_dssp BHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 77776666666666666554
No 72
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.07 E-value=6.8e-06 Score=75.17 Aligned_cols=80 Identities=19% Similarity=0.252 Sum_probs=65.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------CHhhhcCCCCEEEeccCC----CCcccCC-
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------NPEQITSEADIVIAAAGV----ANLVRGS- 196 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------~l~~~~~~aDiVIsAtg~----p~~i~~~- 196 (269)
.++.|+++.|||.|.+ |+.+|+.|...|++|++++++.. ++.+.+++||+|+.+++. .+++..+
T Consensus 142 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~ 220 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGRI-GRVAAQIFHGMGATVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDF 220 (331)
T ss_dssp CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHH
T ss_pred cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHH
Confidence 4689999999999997 99999999999999999987532 466788999999999884 2356443
Q ss_pred --CcCCCcEEEEeeecCC
Q 024306 197 --WLKPGAVVLDVGTCPV 212 (269)
Q Consensus 197 --~~~~g~vViDv~~~~~ 212 (269)
.+++|+++||++....
T Consensus 221 l~~mk~ga~lin~srg~~ 238 (331)
T 1xdw_A 221 LKKMKDGAILVNCARGQL 238 (331)
T ss_dssp HHTSCTTEEEEECSCGGG
T ss_pred HhhCCCCcEEEECCCccc
Confidence 4689999999996543
No 73
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.06 E-value=6.1e-06 Score=75.56 Aligned_cols=135 Identities=19% Similarity=0.193 Sum_probs=90.9
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCC----CCcc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV----ANLV 193 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~----p~~i 193 (269)
+.++.||++.|||.|.+ |+++|+.|...|++|+.++++. .++.+.+++||+|+.+++. .+++
T Consensus 140 ~~~l~g~tvGIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li 218 (330)
T 4e5n_A 140 GTGLDNATVGFLGMGAI-GLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLV 218 (330)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred CCccCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHh
Confidence 34689999999999997 9999999999999999998764 2466788999999999983 2356
Q ss_pred cCC---CcCCCcEEEEeeecCCCCCCC----CCCcee---ecccch---------------HHHhhHcceecccCCcccH
Q 024306 194 RGS---WLKPGAVVLDVGTCPVDDPSC----EYGYRL---MGDVCY---------------EEAMRLASVITPVPGGVGP 248 (269)
Q Consensus 194 ~~~---~~~~g~vViDv~~~~~~~~~~----~~~~~l---~GDvd~---------------~~~~~~~~~~tpvpgGvGp 248 (269)
..+ .+++|+++||++.....+... ...+++ .=||-. .-+.-..-.+||-.+|.-.
T Consensus 219 ~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~ 298 (330)
T 4e5n_A 219 NAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVR 298 (330)
T ss_dssp CHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCH
T ss_pred CHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChH
Confidence 544 468999999999654322100 000011 113321 1111124568998898876
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 024306 249 MTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 249 ~T~~mLl~n~v~a~~~~~ 266 (269)
-+...+....++..++|+
T Consensus 299 e~~~~~~~~~~~ni~~~~ 316 (330)
T 4e5n_A 299 AVRLEIERCAAQNILQAL 316 (330)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666666666666665554
No 74
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.05 E-value=1.7e-05 Score=71.70 Aligned_cols=78 Identities=19% Similarity=0.353 Sum_probs=62.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhC-CC-EEEEEeCCC-----------------CCHhhhcCCCCEEEeccCCCC-c
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRH-HA-TVSIVHALT-----------------KNPEQITSEADIVIAAAGVAN-L 192 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~-ga-~Vti~~~~t-----------------~~l~~~~~~aDiVIsAtg~p~-~ 192 (269)
....+++.|||.|.+ |++++..|.+. |. +|++++|+. .++.+.++++|+||++|+... .
T Consensus 132 ~~~~~~igiIG~G~~-g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~~~v 210 (312)
T 2i99_A 132 PPSSEVLCILGAGVQ-AYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLATEPI 210 (312)
T ss_dssp CTTCCEEEEECCSHH-HHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCSSCC
T ss_pred CCCCcEEEEECCcHH-HHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCCCcc
Confidence 457889999999997 99999998765 76 799998752 245677889999999998544 3
Q ss_pred ccCCCcCCCcEEEEee-ecC
Q 024306 193 VRGSWLKPGAVVLDVG-TCP 211 (269)
Q Consensus 193 i~~~~~~~g~vViDv~-~~~ 211 (269)
+..+++++|.+|+|++ +.|
T Consensus 211 ~~~~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 211 LFGEWVKPGAHINAVGASRP 230 (312)
T ss_dssp BCGGGSCTTCEEEECCCCST
T ss_pred cCHHHcCCCcEEEeCCCCCC
Confidence 6668999999999996 444
No 75
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.05 E-value=9.2e-06 Score=73.96 Aligned_cols=79 Identities=14% Similarity=0.145 Sum_probs=65.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC-CC-------------CCHhhhcCCCCEEEeccCC-C---Ccc
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA-LT-------------KNPEQITSEADIVIAAAGV-A---NLV 193 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~-~t-------------~~l~~~~~~aDiVIsAtg~-p---~~i 193 (269)
.++.|+++.|||.|.+ |+++|+.|...|++|+++++ +. .++.+.+++||+|+.+++. + +++
T Consensus 142 ~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i 220 (320)
T 1gdh_A 142 EKLDNKTLGIYGFGSI-GQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFF 220 (320)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhc
Confidence 4689999999999997 99999999999999999988 43 1566778899999999983 2 345
Q ss_pred cC---CCcCCCcEEEEeeecC
Q 024306 194 RG---SWLKPGAVVLDVGTCP 211 (269)
Q Consensus 194 ~~---~~~~~g~vViDv~~~~ 211 (269)
.. +.+++++++||++...
T Consensus 221 ~~~~l~~mk~gailIn~arg~ 241 (320)
T 1gdh_A 221 NKATIKSLPQGAIVVNTARGD 241 (320)
T ss_dssp SHHHHTTSCTTEEEEECSCGG
T ss_pred CHHHHhhCCCCcEEEECCCCc
Confidence 44 4578999999999764
No 76
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.05 E-value=1.5e-05 Score=72.53 Aligned_cols=78 Identities=15% Similarity=0.240 Sum_probs=62.1
Q ss_pred CccceEEEEcCCcccHHHHHHHHHh-CC-CEEEEEeCCC-------------------CCHhhhcCCCCEEEeccCCCCc
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT-------------------KNPEQITSEADIVIAAAGVANL 192 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~-~g-a~Vti~~~~t-------------------~~l~~~~~~aDiVIsAtg~p~~ 192 (269)
...+++.|||+|+. |+..+..|.. .+ .+|++++|+. .++++.+ ++|+||++|+....
T Consensus 123 ~~~~~v~iIGaG~~-a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~~p 200 (322)
T 1omo_A 123 KNSSVFGFIGCGTQ-AYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSRKP 200 (322)
T ss_dssp TTCCEEEEECCSHH-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCSSC
T ss_pred CCCCEEEEEcCcHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCCCc
Confidence 46789999999997 9999998876 34 4699998762 2345667 89999999996554
Q ss_pred -ccCCCcCCCcEEEEee-ecCCC
Q 024306 193 -VRGSWLKPGAVVLDVG-TCPVD 213 (269)
Q Consensus 193 -i~~~~~~~g~vViDv~-~~~~~ 213 (269)
++.+|+++|+.|+|++ |.|..
T Consensus 201 v~~~~~l~~G~~V~~ig~~~p~~ 223 (322)
T 1omo_A 201 VVKAEWVEEGTHINAIGADGPGK 223 (322)
T ss_dssp CBCGGGCCTTCEEEECSCCSTTC
T ss_pred eecHHHcCCCeEEEECCCCCCCc
Confidence 6778999999999995 65543
No 77
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.04 E-value=3e-05 Score=71.36 Aligned_cols=134 Identities=17% Similarity=0.165 Sum_probs=89.5
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHH-hCCCEEEEEeCCCC--------------CHhhhcCCCCEEEeccCC-C---C
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHALTK--------------NPEQITSEADIVIAAAGV-A---N 191 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~-~~ga~Vti~~~~t~--------------~l~~~~~~aDiVIsAtg~-p---~ 191 (269)
+.++.|+++.|||.|.+ |+++++.|. ..|++|++++++.. ++.+.+++||+|+.+++. + +
T Consensus 158 ~~~l~g~~vgIIG~G~I-G~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~ 236 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAI-QKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHH 236 (348)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTT
T ss_pred CcCCCCCEEEEEEECHH-HHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHH
Confidence 46799999999999997 999999999 99999999987532 456678899999999984 2 3
Q ss_pred cccCC---CcCCCcEEEEeeecCCCCCCC----CCCceeec---ccch------HHHhh-HcceecccCCcccHHHHHHH
Q 024306 192 LVRGS---WLKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DVCY------EEAMR-LASVITPVPGGVGPMTVAML 254 (269)
Q Consensus 192 ~i~~~---~~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dvd~------~~~~~-~~~~~tpvpgGvGp~T~~mL 254 (269)
++..+ .+++++++||++.....+... ...+++.| ||-. ..+.+ ..-.+||-.+|.-.-+..-+
T Consensus 237 li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~ 316 (348)
T 2w2k_A 237 LIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHVTLTTHIGGVAIETFHEF 316 (348)
T ss_dssp CBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSSEEECCSCTTCSHHHHHHH
T ss_pred HhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCCEEEcCcCCCCCHHHHHHH
Confidence 45432 468999999998764322000 00013322 3321 11122 24567888888866665555
Q ss_pred HHHHHHHHHHH
Q 024306 255 LSNTLDSAKRA 265 (269)
Q Consensus 255 l~n~v~a~~~~ 265 (269)
....++..++|
T Consensus 317 ~~~~~~ni~~~ 327 (348)
T 2w2k_A 317 ERLTMTNIDRF 327 (348)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555555
No 78
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=98.04 E-value=1.6e-06 Score=81.19 Aligned_cols=77 Identities=19% Similarity=0.145 Sum_probs=62.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC---CCHhhhcCCCCEEEeccC----CCCcccCCCc----CC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---KNPEQITSEADIVIAAAG----VANLVRGSWL----KP 200 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga---~Vti~~~~t---~~l~~~~~~aDiVIsAtg----~p~~i~~~~~----~~ 200 (269)
...+|+|||+.|.||+.++.++...|+ .|++++++. ....+.++++||||+++- .|.+++.+++ ++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~~~~i~~aDivIn~vlig~~aP~Lvt~e~v~~m~k~ 292 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPFDEIPQADIFINCIYLSKPIAPFTNMEKLNNPNRR 292 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSCCTHHHHSSEEEECCCCCSSCCCSCCHHHHCCTTCC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCchhhHhhCCEEEECcCcCCCCCcccCHHHHhcCcCC
Confidence 567899999955569999999999998 899997542 111255779999999996 4778998875 77
Q ss_pred CcEEEEeeecC
Q 024306 201 GAVVLDVGTCP 211 (269)
Q Consensus 201 g~vViDv~~~~ 211 (269)
|++|+|++..+
T Consensus 293 gsVIVDVA~D~ 303 (394)
T 2qrj_A 293 LRTVVDVSADT 303 (394)
T ss_dssp CCEEEETTCCT
T ss_pred CeEEEEEecCC
Confidence 89999998875
No 79
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.02 E-value=4.4e-05 Score=71.50 Aligned_cols=134 Identities=16% Similarity=0.164 Sum_probs=88.4
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCC----CCc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV----ANL 192 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~----p~~ 192 (269)
+.++.||++.|||.|.+ |+++|+.|...|++|+.++++. .++.+.+++||+|+.+++. .++
T Consensus 186 ~~~l~gktvGIIGlG~I-G~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~l 264 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRI-GLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHM 264 (393)
T ss_dssp CCCCTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTC
T ss_pred CccCCCCEEEEEeECHH-HHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHH
Confidence 45789999999999997 9999999999999999987652 2467888999999999983 235
Q ss_pred ccCC---CcCCCcEEEEeeecCCCCCCC----CCCceee---cccch--------HHHhhHcceecccCCcccHHHHHHH
Q 024306 193 VRGS---WLKPGAVVLDVGTCPVDDPSC----EYGYRLM---GDVCY--------EEAMRLASVITPVPGGVGPMTVAML 254 (269)
Q Consensus 193 i~~~---~~~~g~vViDv~~~~~~~~~~----~~~~~l~---GDvd~--------~~~~~~~~~~tpvpgGvGp~T~~mL 254 (269)
+..+ .+++++++||++.....+... ...+++- -||-. .-+.-..-.+||-.+|.-.-+..-+
T Consensus 265 i~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~~~~~ 344 (393)
T 2nac_A 265 INDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARY 344 (393)
T ss_dssp BSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHHHHHH
T ss_pred hhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHHHHHH
Confidence 6533 578999999999764332100 0001222 23321 1111123467888888765555444
Q ss_pred HHHHHHHHHHH
Q 024306 255 LSNTLDSAKRA 265 (269)
Q Consensus 255 l~n~v~a~~~~ 265 (269)
....++..+.|
T Consensus 345 ~~~~~~nl~~~ 355 (393)
T 2nac_A 345 AAGTREILECF 355 (393)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555544
No 80
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.02 E-value=8.8e-06 Score=74.51 Aligned_cols=133 Identities=17% Similarity=0.174 Sum_probs=90.8
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------CHhhhcCCCCEEEeccCC----CCcccCC-
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------NPEQITSEADIVIAAAGV----ANLVRGS- 196 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------~l~~~~~~aDiVIsAtg~----p~~i~~~- 196 (269)
.++.|+++.|||.|.+ |+.+|+.|...|++|+.++++.. ++.+.+++||+|+.+++. .+++..+
T Consensus 141 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~ 219 (333)
T 1dxy_A 141 KELGQQTVGVMGTGHI-GQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAA 219 (333)
T ss_dssp CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHH
T ss_pred cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCcchhhHhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHH
Confidence 5789999999999997 99999999999999999986532 467788999999999984 2356543
Q ss_pred --CcCCCcEEEEeeecCCCCCCC----CCCceee---cccchHH--------------------Hh-hHcceecccCCcc
Q 024306 197 --WLKPGAVVLDVGTCPVDDPSC----EYGYRLM---GDVCYEE--------------------AM-RLASVITPVPGGV 246 (269)
Q Consensus 197 --~~~~g~vViDv~~~~~~~~~~----~~~~~l~---GDvd~~~--------------------~~-~~~~~~tpvpgGv 246 (269)
.+++|+++||++.....+... ...+++- =||-..+ +. -..-.+||-.+|.
T Consensus 220 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~ 299 (333)
T 1dxy_A 220 FNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYY 299 (333)
T ss_dssp HHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTC
T ss_pred HhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCccccC
Confidence 468999999999876433100 0001232 2443211 11 1245688888888
Q ss_pred cHHHHHHHHHHHHHHHHHH
Q 024306 247 GPMTVAMLLSNTLDSAKRA 265 (269)
Q Consensus 247 Gp~T~~mLl~n~v~a~~~~ 265 (269)
-.-+..-+....++..++|
T Consensus 300 t~e~~~~~~~~~~~nl~~~ 318 (333)
T 1dxy_A 300 TETAVHNMVYFSLQHLVDF 318 (333)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 7666555555555555544
No 81
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.01 E-value=9.2e-06 Score=73.76 Aligned_cols=134 Identities=15% Similarity=0.167 Sum_probs=90.4
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------CHhhhcCCCCEEEeccCC----CCccc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGV----ANLVR 194 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------~l~~~~~~aDiVIsAtg~----p~~i~ 194 (269)
+.++.|+++.|||.|.+ |+++++.|...|++|++++++.. ++.+.+++||+|+.+++. .+++.
T Consensus 137 ~~~l~g~~vgIIG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~ 215 (313)
T 2ekl_A 137 GLELAGKTIGIVGFGRI-GTKVGIIANAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIID 215 (313)
T ss_dssp CCCCTTCEEEEESCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBC
T ss_pred CCCCCCCEEEEEeeCHH-HHHHHHHHHHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhC
Confidence 45789999999999997 99999999999999999987642 456778899999999983 23454
Q ss_pred CC---CcCCCcEEEEeeecCCCCCCC----CCCceee---ccc-------ch---HHHhhHcceecccCCcccHHHHHHH
Q 024306 195 GS---WLKPGAVVLDVGTCPVDDPSC----EYGYRLM---GDV-------CY---EEAMRLASVITPVPGGVGPMTVAML 254 (269)
Q Consensus 195 ~~---~~~~g~vViDv~~~~~~~~~~----~~~~~l~---GDv-------d~---~~~~~~~~~~tpvpgGvGp~T~~mL 254 (269)
.+ .+++++++||++.....+... ...+++- -|| |. +-+....-.+||-.+|.-.-+..-+
T Consensus 216 ~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~~~~~~~ 295 (313)
T 2ekl_A 216 YPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTKEAQKRV 295 (313)
T ss_dssp HHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSHHHHHHH
T ss_pred HHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcHHHHHHH
Confidence 43 468999999999765433100 0001221 133 21 1222345678988888766555555
Q ss_pred HHHHHHHHHHH
Q 024306 255 LSNTLDSAKRA 265 (269)
Q Consensus 255 l~n~v~a~~~~ 265 (269)
....++..++|
T Consensus 296 ~~~~~~n~~~~ 306 (313)
T 2ekl_A 296 AEMTTQNLLNA 306 (313)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555544
No 82
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.99 E-value=1.5e-05 Score=73.42 Aligned_cols=90 Identities=11% Similarity=0.132 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHH-hCC-CEEEEEeCCC---------------------CCHh
Q 024306 118 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ-RHH-ATVSIVHALT---------------------KNPE 174 (269)
Q Consensus 118 ~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~-~~g-a~Vti~~~~t---------------------~~l~ 174 (269)
+.+.+++.... . .....+++.|||+|+. |+..+..|. .++ .+|++++|+. .++.
T Consensus 113 Taa~s~laa~~-l-a~~~~~~v~iIGaG~~-a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~ 189 (350)
T 1x7d_A 113 TAATSLMAAQA-L-ARPNARKMALIGNGAQ-SEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVA 189 (350)
T ss_dssp HHHHHHHHHHH-H-SCTTCCEEEEECCSTT-HHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHH
T ss_pred hhHHHHHHHHH-h-ccccCCeEEEECCcHH-HHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHH
Confidence 44455665552 2 2357889999999997 999888764 344 4799998761 2455
Q ss_pred hhcCCCCEEEeccCCC--C-cccCCCcCCCcEEEEeeec
Q 024306 175 QITSEADIVIAAAGVA--N-LVRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 175 ~~~~~aDiVIsAtg~p--~-~i~~~~~~~g~vViDv~~~ 210 (269)
+.+++||+||++|+.+ . ++..+|+++|+.|++++..
T Consensus 190 eav~~aDiVi~aTps~~~~pvl~~~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 190 EAVKGVDIITTVTADKAYATIITPDMLEPGMHLNAVGGD 228 (350)
T ss_dssp HHHTTCSEEEECCCCSSEEEEECGGGCCTTCEEEECSCC
T ss_pred HHHhcCCEEEEeccCCCCCceecHHHcCCCCEEEECCCC
Confidence 7788999999999965 2 4788999999999999954
No 83
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.99 E-value=1.4e-05 Score=73.58 Aligned_cols=134 Identities=16% Similarity=0.184 Sum_probs=89.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcCCCCEEEeccCC-C---Cccc
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV-A---NLVR 194 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~~aDiVIsAtg~-p---~~i~ 194 (269)
.++.|+++.|||.|.+ |+++|+.|...|++|++++++. .++.+.+++||+|+.+++. + +++.
T Consensus 164 ~~l~g~tvGIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 242 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRV-GQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIN 242 (347)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBS
T ss_pred cCCCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhH
Confidence 4789999999999997 9999999999999999998653 2566788899999999884 2 3454
Q ss_pred CC---CcCCCcEEEEeeecCCCCCCCC----CCceeec---ccchH--------HH-hhHcceecccCCcccHHHHHHHH
Q 024306 195 GS---WLKPGAVVLDVGTCPVDDPSCE----YGYRLMG---DVCYE--------EA-MRLASVITPVPGGVGPMTVAMLL 255 (269)
Q Consensus 195 ~~---~~~~g~vViDv~~~~~~~~~~~----~~~~l~G---Dvd~~--------~~-~~~~~~~tpvpgGvGp~T~~mLl 255 (269)
.+ .+++++++||++.....+.... ..+++.| ||-.. .+ .-..-.+||-.+|...-+..-+.
T Consensus 243 ~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~ 322 (347)
T 1mx3_A 243 DFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMR 322 (347)
T ss_dssp HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHH
T ss_pred HHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHH
Confidence 43 4689999999997765331100 0001111 22100 01 11244677888888766666666
Q ss_pred HHHHHHHHHHh
Q 024306 256 SNTLDSAKRAY 266 (269)
Q Consensus 256 ~n~v~a~~~~~ 266 (269)
...++..++|+
T Consensus 323 ~~~~~ni~~~~ 333 (347)
T 1mx3_A 323 EEAAREIRRAI 333 (347)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666666553
No 84
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.98 E-value=1.4e-05 Score=74.09 Aligned_cols=81 Identities=25% Similarity=0.322 Sum_probs=66.7
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCC--------------CCHhhhcCCCCEEEeccCCC----C
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT--------------KNPEQITSEADIVIAAAGVA----N 191 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~-Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p----~ 191 (269)
+.++.|+++.|||.|.+ |+++|+.|...|++ |+.++++. .++.+.+++||+|+.+++.. +
T Consensus 159 ~~~l~g~tvgIIG~G~I-G~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~ 237 (364)
T 2j6i_A 159 AYDIEGKTIATIGAGRI-GYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKG 237 (364)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTT
T ss_pred cccCCCCEEEEECcCHH-HHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHH
Confidence 46799999999999997 99999999999997 99998652 25678889999999999842 4
Q ss_pred cccC---CCcCCCcEEEEeeecCC
Q 024306 192 LVRG---SWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 192 ~i~~---~~~~~g~vViDv~~~~~ 212 (269)
++.. ..+++++++||++....
T Consensus 238 li~~~~l~~mk~ga~lIn~arG~~ 261 (364)
T 2j6i_A 238 LINKELLSKFKKGAWLVNTARGAI 261 (364)
T ss_dssp CBCHHHHTTSCTTEEEEECSCGGG
T ss_pred HhCHHHHhhCCCCCEEEECCCCch
Confidence 5654 35789999999997654
No 85
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=97.97 E-value=5.2e-05 Score=71.96 Aligned_cols=172 Identities=15% Similarity=0.210 Sum_probs=121.0
Q ss_pred hHHHHHHHHHHHHHc-CCeEEEEEcCCCC-----CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccc--
Q 024306 22 SQTYVRNKIKACEEV-GIKSIVTEFADGC-----TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEK-- 93 (269)
Q Consensus 22 s~~y~~~~~~~~~~~-Gi~~~~~~~~~~~-----~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~k-- 93 (269)
+.--...|.-.|..+ ||++.-++++... +.+++.+.++.+. |++.||+. +.+...+-+..++-.+
T Consensus 113 gmpImeGKl~Lyk~~aGId~lPI~LD~gt~~~~~d~defve~v~~~~--P~fG~Inl-----EDf~ap~af~il~ryr~~ 185 (487)
T 3nv9_A 113 GLGVMEGKALLMKYLGGIDAVPICIDSKNKEGKNDPDAVIEFVQRIQ--HTFGAINL-----EDISQPNCYKILDVLRES 185 (487)
T ss_dssp GHHHHHHHHHHHHHHHCCEEEEEECCCBCTTSCBCHHHHHHHHHHHG--GGCSEEEE-----CSCCTTHHHHHHHHHHHH
T ss_pred CCchhhhHHHHHHhcCCCceeeeEEeCCCccccCCHHHHHHHHHHhC--CCCCeecH-----hhcCCchHHHHHHHHHhh
Confidence 444455677777665 7998888886531 3799999999886 67889877 5444333333222211
Q ss_pred -cccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCC
Q 024306 94 -DVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHAL 169 (269)
Q Consensus 94 -dvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga---~Vti~~~~ 169 (269)
++-.+|.- ..+---.+..|++..++-.+.++++.++++.|+|-+ |..++.+|...|. ++++|+++
T Consensus 186 ~~ipvFnDD----------~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaA-Gigia~ll~~~G~~~~~i~l~D~~ 254 (487)
T 3nv9_A 186 CDIPVWHDD----------QQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSS-NTTCLRLIVTAGADPKKIVMFDSK 254 (487)
T ss_dssp CSSCEEETT----------THHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHH-HHHHHHHHHHTTCCGGGEEEEETT
T ss_pred ccCCccccc----------cchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHcCCCcccEEEEecc
Confidence 22222211 112112245778899999999999999999999998 9999999999998 59999654
Q ss_pred ------------------------------CCCHhhhcCCCCEEEeccCC-CCcccCCCcC---CCcEEEEeeecCC
Q 024306 170 ------------------------------TKNPEQITSEADIVIAAAGV-ANLVRGSWLK---PGAVVLDVGTCPV 212 (269)
Q Consensus 170 ------------------------------t~~l~~~~~~aDiVIsAtg~-p~~i~~~~~~---~g~vViDv~~~~~ 212 (269)
..+|.+.++.+|++|-.... |+.+++++++ +.-+|+-++ ||.
T Consensus 255 Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S~~~pg~ft~e~V~~Ma~~PIIFaLS-NPt 330 (487)
T 3nv9_A 255 GSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLSTPGPGVVKAEWIKSMGEKPIVFCCA-NPV 330 (487)
T ss_dssp EECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECCCSSCCCCCHHHHHTSCSSCEEEECC-SSS
T ss_pred ccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEecccCCCCCCHHHHHhhcCCCEEEECC-CCC
Confidence 12466788999999976643 8899999876 467888887 664
No 86
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=97.96 E-value=7.5e-05 Score=72.40 Aligned_cols=136 Identities=20% Similarity=0.206 Sum_probs=91.1
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------CCHhhhcCCCCEEEeccCCC----Cccc
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGVA----NLVR 194 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------~~l~~~~~~aDiVIsAtg~p----~~i~ 194 (269)
+.++.|+++.|||.|.+ |+++|..|...|++|+.+++.. .++.+.+++||+|+.+++.. +++.
T Consensus 137 ~~~l~g~~vgIIG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~ 215 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGRI-GQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLID 215 (529)
T ss_dssp BCCCTTCEEEEECCSHH-HHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred ccccCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhC
Confidence 35789999999999997 9999999999999999998753 14567788999999999843 3454
Q ss_pred C---CCcCCCcEEEEeeecCCCCCCC----CCCceee---ccc-------chHHHhhHcceecccCCcccHHHHHHHHHH
Q 024306 195 G---SWLKPGAVVLDVGTCPVDDPSC----EYGYRLM---GDV-------CYEEAMRLASVITPVPGGVGPMTVAMLLSN 257 (269)
Q Consensus 195 ~---~~~~~g~vViDv~~~~~~~~~~----~~~~~l~---GDv-------d~~~~~~~~~~~tpvpgGvGp~T~~mLl~n 257 (269)
. ..++++++++|++.....+... ...+++. -|| |..-+.-..-.+||..+|.-+-+...+..+
T Consensus 216 ~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~ 295 (529)
T 1ygy_A 216 KEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTD 295 (529)
T ss_dssp HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHHH
T ss_pred HHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHHH
Confidence 4 3578999999999544322100 0000111 122 111112233458999998877776666666
Q ss_pred HHHHHHHHhC
Q 024306 258 TLDSAKRAYG 267 (269)
Q Consensus 258 ~v~a~~~~~~ 267 (269)
.++.+..|++
T Consensus 296 ~~~~l~~~l~ 305 (529)
T 1ygy_A 296 VAESVRLALA 305 (529)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 6666666654
No 87
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=97.95 E-value=1.2e-05 Score=73.70 Aligned_cols=134 Identities=16% Similarity=0.203 Sum_probs=89.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------CHhhhcCCCCEEEeccCC----CCcccCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------NPEQITSEADIVIAAAGV----ANLVRGS 196 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------~l~~~~~~aDiVIsAtg~----p~~i~~~ 196 (269)
.++.|+++.|||.|.+ |+++|+.|...|++|++++++.. ++.+.+++||+|+.+++. .+++..+
T Consensus 142 ~~l~g~~vgIiG~G~I-G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~ 220 (333)
T 1j4a_A 142 REVRDQVVGVVGTGHI-GQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDE 220 (333)
T ss_dssp CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHH
T ss_pred ccCCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHH
Confidence 4689999999999997 99999999999999999987532 567788899999999983 2345443
Q ss_pred ---CcCCCcEEEEeeecCCCCCCCC----CCceee---cccchH---------------------HHhhHcceecccCCc
Q 024306 197 ---WLKPGAVVLDVGTCPVDDPSCE----YGYRLM---GDVCYE---------------------EAMRLASVITPVPGG 245 (269)
Q Consensus 197 ---~~~~g~vViDv~~~~~~~~~~~----~~~~l~---GDvd~~---------------------~~~~~~~~~tpvpgG 245 (269)
.+++++++||++.....+.... ..+++- =||-.. -..-..-.+||-.+|
T Consensus 221 ~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~ 300 (333)
T 1j4a_A 221 SIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAF 300 (333)
T ss_dssp HHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTT
T ss_pred HHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEECCcccc
Confidence 4689999999987643221000 000111 122110 111124578998898
Q ss_pred ccHHHHHHHHHHHHHHHHHHh
Q 024306 246 VGPMTVAMLLSNTLDSAKRAY 266 (269)
Q Consensus 246 vGp~T~~mLl~n~v~a~~~~~ 266 (269)
.-.-+..-+....++..++|+
T Consensus 301 ~t~~~~~~~~~~~~~nl~~~~ 321 (333)
T 1j4a_A 301 YTTHAVRNMVVKAFDNNLELV 321 (333)
T ss_dssp CBHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 876666666666666666554
No 88
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=97.94 E-value=1.3e-05 Score=73.45 Aligned_cols=133 Identities=20% Similarity=0.247 Sum_probs=87.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCCEEEeccCC----CCcccCC--
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV----ANLVRGS-- 196 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------~~l~~~~~~aDiVIsAtg~----p~~i~~~-- 196 (269)
.++.|+++.|||.|.+ |+++|+.|...|++|++++++. .++.+.+++||+|+.+++. .+++..+
T Consensus 160 ~~l~g~~vgIIG~G~i-G~~vA~~l~~~G~~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l 238 (333)
T 3ba1_A 160 TKFSGKRVGIIGLGRI-GLAVAERAEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVI 238 (333)
T ss_dssp CCCTTCCEEEECCSHH-HHHHHHHHHTTTCCEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHH
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHH
Confidence 5789999999999997 9999999999999999998753 2567788999999999984 2345443
Q ss_pred -CcCCCcEEEEeeecCCCCCCCC----CCcee---ecccch------HHHhh-HcceecccCCcccHHHHHHHHHHHHHH
Q 024306 197 -WLKPGAVVLDVGTCPVDDPSCE----YGYRL---MGDVCY------EEAMR-LASVITPVPGGVGPMTVAMLLSNTLDS 261 (269)
Q Consensus 197 -~~~~g~vViDv~~~~~~~~~~~----~~~~l---~GDvd~------~~~~~-~~~~~tpvpgGvGp~T~~mLl~n~v~a 261 (269)
.+++++++||++.....+.... ..+++ .=||-. ..+.+ ..-.+||-.+|.-.-+..-+....++.
T Consensus 239 ~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~n 318 (333)
T 3ba1_A 239 DALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKVMADLVVGN 318 (333)
T ss_dssp HHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEEECSSCTTCSHHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCcchhhcCCCEEECCcCCCCCHHHHHHHHHHHHHH
Confidence 3688999999986643220000 00011 113311 11111 233678877887655555555555555
Q ss_pred HHHH
Q 024306 262 AKRA 265 (269)
Q Consensus 262 ~~~~ 265 (269)
.++|
T Consensus 319 l~~~ 322 (333)
T 3ba1_A 319 LEAH 322 (333)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 89
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.92 E-value=7.2e-05 Score=68.53 Aligned_cols=133 Identities=17% Similarity=0.186 Sum_probs=91.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------CCHhhhcCCCCEEEeccCC----CCcccCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGV----ANLVRGS 196 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-----------~~l~~~~~~aDiVIsAtg~----p~~i~~~ 196 (269)
.++.||++.|||.|.+ |+.+++.+...|++|...++.. .++.+.+++||+|+..++. .++|+.+
T Consensus 137 ~~l~g~tvGIiG~G~I-G~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~ 215 (334)
T 3kb6_A 137 RELNRLTLGVIGTGRI-GSRVAMYGLAFGMKVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp CCGGGSEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHH
T ss_pred ceecCcEEEEECcchH-HHHHHHhhcccCceeeecCCccchhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHH
Confidence 5688999999999997 9999999999999999887653 2577889999999988883 3467766
Q ss_pred C---cCCCcEEEEeeecCCCCCCC----CCCceeec---ccchHH-H----------------------hhHcceecccC
Q 024306 197 W---LKPGAVVLDVGTCPVDDPSC----EYGYRLMG---DVCYEE-A----------------------MRLASVITPVP 243 (269)
Q Consensus 197 ~---~~~g~vViDv~~~~~~~~~~----~~~~~l~G---Dvd~~~-~----------------------~~~~~~~tpvp 243 (269)
. +|+|+++|.++.-...+... ...+++.| ||-..+ . .-..-.+||-.
T Consensus 216 ~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvilTPHi 295 (334)
T 3kb6_A 216 RISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHI 295 (334)
T ss_dssp HHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSC
T ss_pred HHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEECCch
Confidence 4 68999999999776543210 00124444 653211 0 00133689998
Q ss_pred CcccHHHHHHHHHHHHHHHHHH
Q 024306 244 GGVGPMTVAMLLSNTLDSAKRA 265 (269)
Q Consensus 244 gGvGp~T~~mLl~n~v~a~~~~ 265 (269)
||.-.-+..-+.++.++..++|
T Consensus 296 a~~T~ea~~~~~~~~~~ni~~~ 317 (334)
T 3kb6_A 296 AYYTDKSLERIREETVKVVKAF 317 (334)
T ss_dssp TTCBHHHHHHHHHHHHHHHHHH
T ss_pred hhChHHHHHHHHHHHHHHHHHH
Confidence 9886555555555555555544
No 90
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.88 E-value=1.7e-05 Score=72.39 Aligned_cols=80 Identities=15% Similarity=0.246 Sum_probs=64.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------CHhhhcCCCCEEEeccCCC----Cccc
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVIAAAGVA----NLVR 194 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------~l~~~~~~aDiVIsAtg~p----~~i~ 194 (269)
.++.|+++.|||.|.+ |++++..|...|.+|++++++.. ++.+.+++||+||.+++.. +++.
T Consensus 151 ~~l~g~~vgIIG~G~i-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~ 229 (330)
T 2gcg_A 151 YGLTQSTVGIIGLGRI-GQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCN 229 (330)
T ss_dssp CCCTTCEEEEECCSHH-HHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred cCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhC
Confidence 4688999999999886 99999999999999999986532 4566788999999999842 3454
Q ss_pred C---CCcCCCcEEEEeeecCC
Q 024306 195 G---SWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 195 ~---~~~~~g~vViDv~~~~~ 212 (269)
. ..+++++++||++....
T Consensus 230 ~~~~~~mk~gailIn~srg~~ 250 (330)
T 2gcg_A 230 KDFFQKMKETAVFINISRGDV 250 (330)
T ss_dssp HHHHHHSCTTCEEEECSCGGG
T ss_pred HHHHhcCCCCcEEEECCCCcc
Confidence 2 24688999999987543
No 91
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.86 E-value=1.1e-05 Score=74.61 Aligned_cols=78 Identities=27% Similarity=0.379 Sum_probs=57.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcCCCCEEEeccCCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~p~ 191 (269)
.+++++|+|+|+|++ |+.+++.|...|++|++++++.. ++.+.++++|+||+++|.+.
T Consensus 163 ~l~~~~V~ViGaG~i-G~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 163 GVAPASVVILGGGTV-GTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp BBCCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 378999999999775 99999999999999999987521 12345678999999998542
Q ss_pred -----cccCC---CcCCCcEEEEeeecC
Q 024306 192 -----LVRGS---WLKPGAVVLDVGTCP 211 (269)
Q Consensus 192 -----~i~~~---~~~~g~vViDv~~~~ 211 (269)
++..+ .++++.+++|++...
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v~~~~ 269 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDVAVDQ 269 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC---
T ss_pred cccchhHHHHHHHhhcCCCEEEEEecCC
Confidence 34433 457899999999754
No 92
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=97.83 E-value=2.7e-05 Score=71.24 Aligned_cols=133 Identities=17% Similarity=0.187 Sum_probs=87.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------CHhhhcCCCCEEEeccCCC----CcccC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGVA----NLVRG 195 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------~l~~~~~~aDiVIsAtg~p----~~i~~ 195 (269)
.++.|+++.|||.|.+ |+++|+.|...|++|++++++.. ++.+.+++||+|+.+++.. +++..
T Consensus 142 ~~l~g~~vgIIG~G~i-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~ 220 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAI-GKAIARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINE 220 (333)
T ss_dssp CCSTTCEEEEECCSHH-HHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCH
T ss_pred CCCCcCEEEEEccCHH-HHHHHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCH
Confidence 5799999999999997 99999999999999999987642 4556788999999999853 34553
Q ss_pred ---CCcCCCcEEEEeeecCCCCCCC----CCCceee---cccc-------hHHHhhH-cceecccCCcccHHHHHHHHHH
Q 024306 196 ---SWLKPGAVVLDVGTCPVDDPSC----EYGYRLM---GDVC-------YEEAMRL-ASVITPVPGGVGPMTVAMLLSN 257 (269)
Q Consensus 196 ---~~~~~g~vViDv~~~~~~~~~~----~~~~~l~---GDvd-------~~~~~~~-~~~~tpvpgGvGp~T~~mLl~n 257 (269)
..++++ ++||++.....+... ...+++- -||- ..-+.-. .-.+||-.+|.-.-+..-+...
T Consensus 221 ~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~~~~~~~ 299 (333)
T 2d0i_A 221 ERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQEDVGFR 299 (333)
T ss_dssp HHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHHHHHHHH
T ss_pred HHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHHHHHHHH
Confidence 346889 999998654432100 0000111 1221 1111112 3567888888766666555555
Q ss_pred HHHHHHHHh
Q 024306 258 TLDSAKRAY 266 (269)
Q Consensus 258 ~v~a~~~~~ 266 (269)
.++..++++
T Consensus 300 ~~~n~~~~~ 308 (333)
T 2d0i_A 300 AVENLLKVL 308 (333)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555543
No 93
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.78 E-value=1.6e-05 Score=73.15 Aligned_cols=115 Identities=20% Similarity=0.251 Sum_probs=74.1
Q ss_pred CCccc--eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------CCHhhhcCCCCEEEeccCCC
Q 024306 133 EIMGK--NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------KNPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 133 ~l~gk--~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------------~~l~~~~~~aDiVIsAtg~p 190 (269)
+++|+ ||+|+|+|.+ |++++..|++ ..+|+++.+.. ..+.+.++++|+|||++|..
T Consensus 11 ~~~g~~mkilvlGaG~v-G~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 11 HIEGRHMKVLILGAGNI-GRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -----CCEEEEECCSHH-HHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred cccCCccEEEEECCCHH-HHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 34444 6999999775 9999999875 46898886541 23567789999999999842
Q ss_pred -Cc-ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHHhhHcceecccC-CcccHHHHHHHHHHHHHHH
Q 024306 191 -NL-VRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEAMRLASVITPVP-GGVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 191 -~~-i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~~~~~~~~tpvp-gGvGp~T~~mLl~n~v~a~ 262 (269)
+. +-...++.|.-++|+.+.+.+. +-+ .+.+++++... ++ =|+-|=-..||...+++.+
T Consensus 89 ~~~~v~~~~~~~g~~yvD~s~~~~~~-------~~l-----~~~a~~~g~~~-i~~~G~~PG~~~~~a~~~~~~~ 150 (365)
T 3abi_A 89 LGFKSIKAAIKSKVDMVDVSFMPENP-------LEL-----RDEAEKAQVTI-VFDAGFAPGLSNILMGRIFQEL 150 (365)
T ss_dssp GHHHHHHHHHHHTCEEEECCCCSSCG-------GGG-----HHHHHHTTCEE-ECCCBTTTBHHHHHHHHHHHHS
T ss_pred ccchHHHHHHhcCcceEeeeccchhh-------hhh-----hhhhccCCcee-eecCCCCCchHHHHHHHHHHhc
Confidence 22 4445677799999999765322 111 24455555422 22 3566666778877666543
No 94
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=97.78 E-value=4e-05 Score=71.98 Aligned_cols=82 Identities=20% Similarity=0.296 Sum_probs=67.5
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------CCHhhhcCCCCEEEeccCC-C---CcccCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGV-A---NLVRGS 196 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------~~l~~~~~~aDiVIsAtg~-p---~~i~~~ 196 (269)
+.++.||++.|||.|.+ |+.+|+.|...|++|+.+++.. .++.+.+++||+|+..++. + +++..+
T Consensus 140 ~~el~gktlGiIGlG~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 218 (404)
T 1sc6_A 140 SFEARGKKLGIIGYGHI-GTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAK 218 (404)
T ss_dssp CCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHH
T ss_pred ccccCCCEEEEEeECHH-HHHHHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHH
Confidence 46799999999999997 9999999999999999998642 2577889999999999984 2 356544
Q ss_pred ---CcCCCcEEEEeeecCCC
Q 024306 197 ---WLKPGAVVLDVGTCPVD 213 (269)
Q Consensus 197 ---~~~~g~vViDv~~~~~~ 213 (269)
.+|+|+++||++.....
T Consensus 219 ~l~~mk~ga~lIN~aRg~~v 238 (404)
T 1sc6_A 219 EISLMKPGSLLINASRGTVV 238 (404)
T ss_dssp HHHHSCTTEEEEECSCSSSB
T ss_pred HHhhcCCCeEEEECCCChHH
Confidence 46899999999976543
No 95
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=97.73 E-value=1.3e-05 Score=69.73 Aligned_cols=79 Identities=19% Similarity=0.263 Sum_probs=56.1
Q ss_pred HHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC-----------------------------HhhhcC
Q 024306 128 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN-----------------------------PEQITS 178 (269)
Q Consensus 128 ~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~-----------------------------l~~~~~ 178 (269)
++...++.+++|.|||.|.+ |.+++..|.+.|.+|++++|+... ..+.++
T Consensus 11 ~~~~~~~~~~kIgiIG~G~m-G~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 89 (245)
T 3dtt_A 11 HHENLYFQGMKIAVLGTGTV-GRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAA 89 (245)
T ss_dssp --------CCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHH
T ss_pred cccccccCCCeEEEECCCHH-HHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHh
Confidence 34556789999999999987 999999999999999999876322 234567
Q ss_pred CCCEEEeccCCCCc---cc---CCCcCCCcEEEEee
Q 024306 179 EADIVIAAAGVANL---VR---GSWLKPGAVVLDVG 208 (269)
Q Consensus 179 ~aDiVIsAtg~p~~---i~---~~~~~~g~vViDv~ 208 (269)
+||+||.+++.+.. +. ...+ ++.+|||+.
T Consensus 90 ~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 90 GAELVVNATEGASSIAALTAAGAENL-AGKILVDIA 124 (245)
T ss_dssp HCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECC
T ss_pred cCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECC
Confidence 89999999986432 21 2234 789999998
No 96
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=97.68 E-value=4.9e-05 Score=68.71 Aligned_cols=76 Identities=18% Similarity=0.347 Sum_probs=60.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCCc----ccC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----VRG 195 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~~----i~~ 195 (269)
.+.++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+.. +..
T Consensus 29 ~~~~~I~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 29 PYARKITFLGTGSM-GLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp CCCSEEEEECCTTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred cCCCEEEEECccHH-HHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 35679999999887 9999999999999999998762 3567788999999999986431 221
Q ss_pred -C---CcCCCcEEEEeeec
Q 024306 196 -S---WLKPGAVVLDVGTC 210 (269)
Q Consensus 196 -~---~~~~g~vViDv~~~ 210 (269)
+ .++++.+|||++..
T Consensus 108 ~~~~~~l~~~~~vi~~st~ 126 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASI 126 (320)
T ss_dssp TCHHHHCCTTCEEEECSCC
T ss_pred hhHHhhCCCCCEEEecCCC
Confidence 2 36789999999864
No 97
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=97.65 E-value=3.9e-05 Score=68.01 Aligned_cols=73 Identities=15% Similarity=0.170 Sum_probs=57.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----cc-c-C-
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-R-G- 195 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i-~-~- 195 (269)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+ . .
T Consensus 2 ~~i~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 80 (287)
T 3pef_A 2 QKFGFIGLGIM-GSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG 80 (287)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEEeecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence 58999999886 9999999999999999998763 355677888999999998542 12 1 2
Q ss_pred --CCcCCCcEEEEeeec
Q 024306 196 --SWLKPGAVVLDVGTC 210 (269)
Q Consensus 196 --~~~~~g~vViDv~~~ 210 (269)
..++++.+|+|+...
T Consensus 81 l~~~l~~~~~vi~~st~ 97 (287)
T 3pef_A 81 VLEGIGEGRGYVDMSTV 97 (287)
T ss_dssp HHHHCCTTCEEEECSCC
T ss_pred HhhcCCCCCEEEeCCCC
Confidence 236789999998753
No 98
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.64 E-value=2.6e-05 Score=58.81 Aligned_cols=73 Identities=22% Similarity=0.229 Sum_probs=51.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCCC---------------------CHhhhcCCCCEEEeccCCCC-
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK---------------------NPEQITSEADIVIAAAGVAN- 191 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~p~- 191 (269)
.+++++|+|+|+ +|+.++..|.++| .+|+++.++.. ++.+.++++|+||+++|...
T Consensus 4 ~~~~v~I~G~G~-iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGK-IGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECCSH-HHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred CcCeEEEECCCH-HHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence 468999999966 5999999999999 78999987631 23355678899998886321
Q ss_pred -cccCCCcCCCcEEEEee
Q 024306 192 -LVRGSWLKPGAVVLDVG 208 (269)
Q Consensus 192 -~i~~~~~~~g~vViDv~ 208 (269)
.+-....+.|...+|+.
T Consensus 83 ~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp HHHHHHHHHTTCEEECCC
T ss_pred HHHHHHHHHhCCCEEEec
Confidence 12222345566666655
No 99
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=97.64 E-value=9.8e-05 Score=65.74 Aligned_cols=73 Identities=22% Similarity=0.365 Sum_probs=58.4
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----ccc----
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVR---- 194 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i~---- 194 (269)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+.
T Consensus 4 ~~I~iiG~G~m-G~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 82 (302)
T 2h78_A 4 KQIAFIGLGHM-GAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG 82 (302)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSC
T ss_pred CEEEEEeecHH-HHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchh
Confidence 58999999886 9999999999999999998762 356778899999999998543 122
Q ss_pred -CCCcCCCcEEEEeeec
Q 024306 195 -GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 195 -~~~~~~g~vViDv~~~ 210 (269)
.+.++++.+|+|+...
T Consensus 83 ~~~~l~~~~~vi~~st~ 99 (302)
T 2h78_A 83 LLAHIAPGTLVLECSTI 99 (302)
T ss_dssp GGGSSCSSCEEEECSCC
T ss_pred HHhcCCCCcEEEECCCC
Confidence 1246789999997643
No 100
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.58 E-value=8.8e-05 Score=64.28 Aligned_cols=123 Identities=15% Similarity=0.219 Sum_probs=70.6
Q ss_pred HHHHHHHHHhC--CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------CHhhhcCCC
Q 024306 121 KGCIELLIRSG--VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------NPEQITSEA 180 (269)
Q Consensus 121 ~g~~~~l~~~~--~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------------~l~~~~~~a 180 (269)
.|-++.+..+. ++++|++|+|||+|.+ |...+..|.+.||.|+++..... -..+.+..+
T Consensus 14 ~~~~~~~~~~Pifl~L~gk~VLVVGgG~v-a~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~a 92 (223)
T 3dfz_A 14 SGHIEGRHMYTVMLDLKGRSVLVVGGGTI-ATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNV 92 (223)
T ss_dssp --------CCEEEECCTTCCEEEECCSHH-HHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSC
T ss_pred cCcccccCccccEEEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCC
Confidence 44455555443 4789999999999986 99999999999999999865421 012457889
Q ss_pred CEEEeccCCCCc---ccCCCcCCCcEEEEeeecCCCCCCCCCCceeecccchHHH---hhHcceecccCCcccHHHHHHH
Q 024306 181 DIVIAAAGVANL---VRGSWLKPGAVVLDVGTCPVDDPSCEYGYRLMGDVCYEEA---MRLASVITPVPGGVGPMTVAML 254 (269)
Q Consensus 181 DiVIsAtg~p~~---i~~~~~~~g~vViDv~~~~~~~~~~~~~~~l~GDvd~~~~---~~~~~~~tpvpgGvGp~T~~mL 254 (269)
|+||.||+.+.. +... -+.+ +.+.++-+|... .|. +.++ .+..-+++ -||-+|..+..|
T Consensus 93 dLVIaAT~d~~~N~~I~~~-ak~g-i~VNvvD~p~~~-------~f~----~Paiv~rg~l~iaIS--T~G~sP~la~~i 157 (223)
T 3dfz_A 93 FFIVVATNDQAVNKFVKQH-IKND-QLVNMASSFSDG-------NIQ----IPAQFSRGRLSLAIS--TDGASPLLTKRI 157 (223)
T ss_dssp SEEEECCCCTHHHHHHHHH-SCTT-CEEEC-----CC-------SEE----CCEEEEETTEEEEEE--CTTSCHHHHHHH
T ss_pred CEEEECCCCHHHHHHHHHH-HhCC-CEEEEeCCcccC-------eEE----EeeEEEeCCEEEEEE--CCCCCcHHHHHH
Confidence 999999997652 2221 1333 334555444211 111 1111 12233444 578888887776
Q ss_pred HHHHH
Q 024306 255 LSNTL 259 (269)
Q Consensus 255 l~n~v 259 (269)
-+.+.
T Consensus 158 R~~ie 162 (223)
T 3dfz_A 158 KEDLS 162 (223)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 101
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.58 E-value=5.3e-05 Score=68.13 Aligned_cols=75 Identities=17% Similarity=0.222 Sum_probs=59.6
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----cc-c-
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-R- 194 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i-~- 194 (269)
+-++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+ .
T Consensus 20 ~m~~I~iIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~ 98 (310)
T 3doj_A 20 HMMEVGFLGLGIM-GKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDK 98 (310)
T ss_dssp CSCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred cCCEEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCc
Confidence 4478999999886 9999999999999999998863 356677888999999998653 12 1
Q ss_pred C---CCcCCCcEEEEeeec
Q 024306 195 G---SWLKPGAVVLDVGTC 210 (269)
Q Consensus 195 ~---~~~~~g~vViDv~~~ 210 (269)
. ..++++.+|+|+...
T Consensus 99 ~~l~~~l~~g~~vv~~st~ 117 (310)
T 3doj_A 99 GGVLEQICEGKGYIDMSTV 117 (310)
T ss_dssp TCGGGGCCTTCEEEECSCC
T ss_pred hhhhhccCCCCEEEECCCC
Confidence 1 246789999998854
No 102
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.56 E-value=0.0001 Score=65.84 Aligned_cols=72 Identities=19% Similarity=0.232 Sum_probs=57.4
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCCc----cc--CC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----VR--GS 196 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~~----i~--~~ 196 (269)
++|.|||.|.+ |.+++..|++.|.+|++++++. .++.+.++ +|+||.+++.+.. +. ..
T Consensus 16 ~~I~vIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~ 93 (296)
T 3qha_A 16 LKLGYIGLGNM-GAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG 93 (296)
T ss_dssp CCEEEECCSTT-HHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred CeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence 68999999886 9999999999999999998764 25567777 9999999986431 11 23
Q ss_pred CcCCCcEEEEeeec
Q 024306 197 WLKPGAVVLDVGTC 210 (269)
Q Consensus 197 ~~~~g~vViDv~~~ 210 (269)
.++++.+|+|....
T Consensus 94 ~l~~g~ivv~~st~ 107 (296)
T 3qha_A 94 HAKPGTVIAIHSTI 107 (296)
T ss_dssp TCCTTCEEEECSCC
T ss_pred hcCCCCEEEEeCCC
Confidence 56789999998754
No 103
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.55 E-value=4.1e-05 Score=72.79 Aligned_cols=74 Identities=16% Similarity=0.176 Sum_probs=55.5
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------CHhhhcCCCCEEEeccCCC-
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------NPEQITSEADIVIAAAGVA- 190 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------------~l~~~~~~aDiVIsAtg~p- 190 (269)
++++|+|+|+|++ |++++..|++.|++|++++|+.. ++.+.++++|+||+++|..
T Consensus 2 ~~k~VlViGaG~i-G~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~ 80 (450)
T 1ff9_A 2 ATKSVLMLGSGFV-TRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF 80 (450)
T ss_dssp CCCEEEEECCSTT-HHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--C
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcccc
Confidence 4789999998886 99999999999999999987520 1235567899999999852
Q ss_pred Cc-ccCCCcCCCcEEEEeee
Q 024306 191 NL-VRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 191 ~~-i~~~~~~~g~vViDv~~ 209 (269)
+. +..+.++.|..++|..+
T Consensus 81 ~~~i~~a~l~~g~~vvd~~~ 100 (450)
T 1ff9_A 81 HATVIKSAIRQKKHVVTTSY 100 (450)
T ss_dssp HHHHHHHHHHHTCEEEESSC
T ss_pred chHHHHHHHhCCCeEEEeec
Confidence 22 44456677788888764
No 104
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=97.51 E-value=5.6e-05 Score=66.97 Aligned_cols=73 Identities=19% Similarity=0.234 Sum_probs=58.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----cc-c-C-
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-R-G- 195 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i-~-~- 195 (269)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+ . .
T Consensus 2 ~~I~iiG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~ 80 (287)
T 3pdu_A 2 TTYGFLGLGIM-GGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANG 80 (287)
T ss_dssp CCEEEECCSTT-HHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CeEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchh
Confidence 47999999886 9999999999999999998863 356677889999999998652 12 1 1
Q ss_pred --CCcCCCcEEEEeeec
Q 024306 196 --SWLKPGAVVLDVGTC 210 (269)
Q Consensus 196 --~~~~~g~vViDv~~~ 210 (269)
+.++++.+|+|+...
T Consensus 81 l~~~l~~g~~vv~~st~ 97 (287)
T 3pdu_A 81 VLEGIGGGRGYIDMSTV 97 (287)
T ss_dssp GGGTCCTTCEEEECSCC
T ss_pred hhhcccCCCEEEECCCC
Confidence 246789999998864
No 105
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.50 E-value=0.00022 Score=64.24 Aligned_cols=73 Identities=22% Similarity=0.408 Sum_probs=59.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----c-ccC--
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----L-VRG-- 195 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~-i~~-- 195 (269)
|+|-+||-|.+ |.++|..|.+.|.+|++.+|+. .++.+.++++|+||+..+.+. . ...
T Consensus 4 ~kIgfIGlG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g 82 (300)
T 3obb_A 4 KQIAFIGLGHM-GAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG 82 (300)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSS
T ss_pred CEEEEeeehHH-HHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhh
Confidence 58999999997 9999999999999999999873 467788999999999998533 1 122
Q ss_pred --CCcCCCcEEEEeeec
Q 024306 196 --SWLKPGAVVLDVGTC 210 (269)
Q Consensus 196 --~~~~~g~vViDv~~~ 210 (269)
+.+++|.++||++..
T Consensus 83 ~~~~~~~g~iiId~sT~ 99 (300)
T 3obb_A 83 LLAHIAPGTLVLECSTI 99 (300)
T ss_dssp STTSCCC-CEEEECSCC
T ss_pred hhhcCCCCCEEEECCCC
Confidence 245789999999865
No 106
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.48 E-value=9e-05 Score=66.28 Aligned_cols=74 Identities=14% Similarity=0.167 Sum_probs=58.1
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------CCHhhhcCCCCEEEeccCCCC----cc-c-
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQITSEADIVIAAAGVAN----LV-R- 194 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------~~l~~~~~~aDiVIsAtg~p~----~i-~- 194 (269)
.++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+ .
T Consensus 7 ~~~I~iIG~G~m-G~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~ 85 (303)
T 3g0o_A 7 DFHVGIVGLGSM-GMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGE 85 (303)
T ss_dssp CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--
T ss_pred CCeEEEECCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhCh
Confidence 467999999886 9999999999999999998762 245567789999999998642 12 1
Q ss_pred C---CCcCCCcEEEEeeec
Q 024306 195 G---SWLKPGAVVLDVGTC 210 (269)
Q Consensus 195 ~---~~~~~g~vViDv~~~ 210 (269)
. ..++++.+|+|++..
T Consensus 86 ~~l~~~l~~g~ivv~~st~ 104 (303)
T 3g0o_A 86 DGVAHLMKPGSAVMVSSTI 104 (303)
T ss_dssp CCCGGGSCTTCEEEECSCC
T ss_pred hhHHhhCCCCCEEEecCCC
Confidence 1 246789999998754
No 107
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.46 E-value=8.7e-05 Score=66.64 Aligned_cols=78 Identities=15% Similarity=0.104 Sum_probs=61.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----ccc
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVR 194 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i~ 194 (269)
....++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+.
T Consensus 6 ~~~~~~IgiIG~G~m-G~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAM-GTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCSCSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred ccCCCeEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 345688999999887 9999999999999999998762 356777889999999998643 232
Q ss_pred CC---CcCCCcEEEEeeecC
Q 024306 195 GS---WLKPGAVVLDVGTCP 211 (269)
Q Consensus 195 ~~---~~~~g~vViDv~~~~ 211 (269)
.+ .++++.+|||++...
T Consensus 85 ~~~l~~~~~g~ivid~st~~ 104 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNA 104 (306)
T ss_dssp STTHHHHTTTCEEEECCCCC
T ss_pred ccchhhccCCCEEEECCCCC
Confidence 11 246789999987543
No 108
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.45 E-value=0.00021 Score=60.71 Aligned_cols=58 Identities=17% Similarity=0.119 Sum_probs=43.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC--------------------HhhhcCCCCEEEeccCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------------------PEQITSEADIVIAAAGV 189 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~--------------------l~~~~~~aDiVIsAtg~ 189 (269)
..++|++|+|.|++|.+|+.++..|+++|++|+++.|+... +.+.+...|+||+..|.
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence 45789999999998888999999999999999999876432 23445667777777663
No 109
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=97.44 E-value=8.8e-05 Score=67.73 Aligned_cols=74 Identities=22% Similarity=0.243 Sum_probs=57.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------CHhhhcCCCCEEEeccCCC---Cccc--
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NPEQITSEADIVIAAAGVA---NLVR-- 194 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------~l~~~~~~aDiVIsAtg~p---~~i~-- 194 (269)
+++++|.|||.|.+ |.+++..|.+.|.+|++++++.. ++.+.+++||+||.+++.. ..+.
T Consensus 14 l~~~~I~IIG~G~m-G~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~~~~v~~~~ 92 (338)
T 1np3_A 14 IQGKKVAIIGYGSQ-GHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEE 92 (338)
T ss_dssp HHTSCEEEECCSHH-HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHH
T ss_pred hcCCEEEEECchHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHHHHHHHHHH
Confidence 46789999999886 99999999999999999887642 3446678999999999842 2333
Q ss_pred -CCCcCCCcEEEEee
Q 024306 195 -GSWLKPGAVVLDVG 208 (269)
Q Consensus 195 -~~~~~~g~vViDv~ 208 (269)
...++++++|+|++
T Consensus 93 i~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 93 IEPNLKKGATLAFAH 107 (338)
T ss_dssp TGGGCCTTCEEEESC
T ss_pred HHhhCCCCCEEEEcC
Confidence 23578899999874
No 110
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.42 E-value=0.00021 Score=65.92 Aligned_cols=77 Identities=14% Similarity=0.188 Sum_probs=59.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCC---CEEEeccCCCCc---c
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEA---DIVIAAAGVANL---V 193 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~a---DiVIsAtg~p~~---i 193 (269)
++.++|.|||.|.+ |.+++..|++.|.+|++++++. .++.+.++++ |+||.+++.+.. +
T Consensus 20 m~~mkIgiIGlG~m-G~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRM-GADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSML 98 (358)
T ss_dssp --CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHH
T ss_pred hcCCEEEEECchHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHH
Confidence 46789999999886 9999999999999999998862 3566777777 999999986531 1
Q ss_pred c--CCCcCCCcEEEEeeecC
Q 024306 194 R--GSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 194 ~--~~~~~~g~vViDv~~~~ 211 (269)
. ...++++.+|||++...
T Consensus 99 ~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 99 QRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHHGGGCCTTCEEEECSSCC
T ss_pred HHHHhhCCCCCEEEeCCCCC
Confidence 1 23467899999988543
No 111
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.38 E-value=0.00025 Score=65.76 Aligned_cols=93 Identities=16% Similarity=0.168 Sum_probs=62.0
Q ss_pred cCCHHHHH----HHHHH-hCC-CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCH--------------hhh
Q 024306 117 PCTPKGCI----ELLIR-SGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--------------EQI 176 (269)
Q Consensus 117 p~t~~g~~----~~l~~-~~~-~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l--------------~~~ 176 (269)
+.|+.|+. +++++ .+. +++||+|+|+|.|.+ |..+|+.|.+.|++|++++++...+ .+.
T Consensus 148 ~aTg~GV~~~~~~~~~~~~G~~~L~GktV~V~G~G~V-G~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~l 226 (364)
T 1leh_A 148 PVTAYGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNV-AKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAI 226 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGT
T ss_pred cchhhHHHHHHHHHHHhhccccCCCcCEEEEECchHH-HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHH
Confidence 45777754 44454 365 899999999999886 9999999999999999887653211 122
Q ss_pred c-CCCCEEEeccCCCCcccCCCcC--CCcEEEEeeecC
Q 024306 177 T-SEADIVIAAAGVANLVRGSWLK--PGAVVLDVGTCP 211 (269)
Q Consensus 177 ~-~~aDiVIsAtg~p~~i~~~~~~--~g~vViDv~~~~ 211 (269)
+ .++||+|.+. ..+.++.+.++ ...+|+..+-.|
T Consensus 227 l~~~~DIvip~a-~~~~I~~~~~~~lg~~iV~e~An~p 263 (364)
T 1leh_A 227 YGVTCDIFAPCA-LGAVLNDFTIPQLKAKVIAGSADNQ 263 (364)
T ss_dssp TTCCCSEEEECS-CSCCBSTTHHHHCCCSEECCSCSCC
T ss_pred hccCCcEeeccc-hHHHhCHHHHHhCCCcEEEeCCCCC
Confidence 2 3789999764 33456555432 234454544333
No 112
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.37 E-value=0.00018 Score=64.58 Aligned_cols=73 Identities=15% Similarity=0.182 Sum_probs=55.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCCc----ccC---
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----VRG--- 195 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~~----i~~--- 195 (269)
+||-+||-|.+ |.++|..|.+.|.+|++++|+. .++.+.++++|+||+.++.+.- +..
T Consensus 6 ~kIgfIGLG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~ 84 (297)
T 4gbj_A 6 EKIAFLGLGNL-GTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELV 84 (297)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHH
T ss_pred CcEEEEecHHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHH
Confidence 57999999997 9999999999999999998763 3567888999999999886431 211
Q ss_pred CCcCCCcEEEEeeec
Q 024306 196 SWLKPGAVVLDVGTC 210 (269)
Q Consensus 196 ~~~~~g~vViDv~~~ 210 (269)
..++++.++||.+..
T Consensus 85 ~~~~~~~iiid~sT~ 99 (297)
T 4gbj_A 85 EKLGKDGVHVSMSTI 99 (297)
T ss_dssp HHHCTTCEEEECSCC
T ss_pred hhcCCCeEEEECCCC
Confidence 135678888888754
No 113
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.37 E-value=0.00016 Score=64.67 Aligned_cols=73 Identities=19% Similarity=0.270 Sum_probs=57.7
Q ss_pred cceEEEEc-CCcccHHHHHHHHHhCCCEEEEEeCCCC-CHhhhcCCCCEEEeccCCCC---ccc--CCCcCCCcEEEEee
Q 024306 136 GKNAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK-NPEQITSEADIVIAAAGVAN---LVR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 136 gk~v~ViG-~gg~vg~~~a~~L~~~ga~Vti~~~~t~-~l~~~~~~aDiVIsAtg~p~---~i~--~~~~~~g~vViDv~ 208 (269)
.++|.||| .|.+ |.+++..|.+.|.+|+++++... +..+.+++||+||.+++... .+. ...++++++|+|++
T Consensus 21 ~~~I~iIGg~G~m-G~~la~~l~~~G~~V~~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~~~~ 99 (298)
T 2pv7_A 21 IHKIVIVGGYGKL-GGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLT 99 (298)
T ss_dssp CCCEEEETTTSHH-HHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECC
T ss_pred CCEEEEEcCCCHH-HHHHHHHHHhCCCeEEEEECCcccCHHHHhcCCCEEEEeCCHHHHHHHHHHHHhhcCCCcEEEECC
Confidence 46899999 8776 99999999999999999987643 46678899999999998543 121 23467889999986
Q ss_pred e
Q 024306 209 T 209 (269)
Q Consensus 209 ~ 209 (269)
.
T Consensus 100 s 100 (298)
T 2pv7_A 100 S 100 (298)
T ss_dssp S
T ss_pred C
Confidence 4
No 114
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.36 E-value=0.00018 Score=64.99 Aligned_cols=72 Identities=17% Similarity=0.106 Sum_probs=57.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCC-------------------C-CHhhhcCCCCEEEeccCCCCc---
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT-------------------K-NPEQITSEADIVIAAAGVANL--- 192 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t-------------------~-~l~~~~~~aDiVIsAtg~p~~--- 192 (269)
++|.|||.|.+ |.+++..|++.| .+|++++++. . ++.+.+++||+||.+++.+..
T Consensus 25 m~IgvIG~G~m-G~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~~~~s~~e~~~~aDvVi~avp~~~~~~~ 103 (317)
T 4ezb_A 25 TTIAFIGFGEA-AQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGVEPLDDVAGIACADVVLSLVVGAATKAV 103 (317)
T ss_dssp CEEEEECCSHH-HHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTCEEESSGGGGGGCSEEEECCCGGGHHHH
T ss_pred CeEEEECccHH-HHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCCCCCCHHHHHhcCCEEEEecCCHHHHHH
Confidence 68999999886 999999999999 8999998763 1 456677889999999986432
Q ss_pred cc--CCCcCCCcEEEEeee
Q 024306 193 VR--GSWLKPGAVVLDVGT 209 (269)
Q Consensus 193 i~--~~~~~~g~vViDv~~ 209 (269)
+. ...++++.+|||+..
T Consensus 104 ~~~i~~~l~~~~ivv~~st 122 (317)
T 4ezb_A 104 AASAAPHLSDEAVFIDLNS 122 (317)
T ss_dssp HHHHGGGCCTTCEEEECCS
T ss_pred HHHHHhhcCCCCEEEECCC
Confidence 11 124678889999874
No 115
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.36 E-value=0.00019 Score=64.90 Aligned_cols=75 Identities=17% Similarity=0.179 Sum_probs=58.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC----------------CCHhh-hcCCCCEEEeccCCCC---c
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------KNPEQ-ITSEADIVIAAAGVAN---L 192 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t----------------~~l~~-~~~~aDiVIsAtg~p~---~ 192 (269)
.-++|.|||.|.+ |.+++..|.+.|. +|++++++. .++.+ .+++||+||.+++... .
T Consensus 32 ~~~kI~IIG~G~m-G~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v 110 (314)
T 3ggo_A 32 SMQNVLIVGVGFM-GGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREI 110 (314)
T ss_dssp SCSEEEEESCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHH
T ss_pred CCCEEEEEeeCHH-HHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHHH
Confidence 3478999999886 9999999999998 899998752 24556 7889999999998532 1
Q ss_pred cc--CCCcCCCcEEEEeeec
Q 024306 193 VR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 193 i~--~~~~~~g~vViDv~~~ 210 (269)
+. ...++++++|+|++..
T Consensus 111 l~~l~~~l~~~~iv~d~~Sv 130 (314)
T 3ggo_A 111 AKKLSYILSEDATVTDQGSV 130 (314)
T ss_dssp HHHHHHHSCTTCEEEECCSC
T ss_pred HHHHhhccCCCcEEEECCCC
Confidence 21 1246889999998753
No 116
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=97.35 E-value=0.0003 Score=59.62 Aligned_cols=74 Identities=22% Similarity=0.338 Sum_probs=52.8
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhhcCCCCEEEeccCCCC---ccc--CCCcCCCcEE
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVAN---LVR--GSWLKPGAVV 204 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~~~~~~aDiVIsAtg~p~---~i~--~~~~~~g~vV 204 (269)
.+..+..++|.|||+|.+ |.+++..|.+.|.+|++++++.. .+++||+||.+++.+. .+. ...++ ++++
T Consensus 13 ~~~~~~~~~I~iiG~G~m-G~~la~~l~~~g~~V~~~~~~~~----~~~~aD~vi~av~~~~~~~v~~~l~~~~~-~~~v 86 (209)
T 2raf_A 13 ENLYFQGMEITIFGKGNM-GQAIGHNFEIAGHEVTYYGSKDQ----ATTLGEIVIMAVPYPALAALAKQYATQLK-GKIV 86 (209)
T ss_dssp -------CEEEEECCSHH-HHHHHHHHHHTTCEEEEECTTCC----CSSCCSEEEECSCHHHHHHHHHHTHHHHT-TSEE
T ss_pred cccccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCHH----HhccCCEEEEcCCcHHHHHHHHHHHHhcC-CCEE
Confidence 356678899999999886 99999999999999999987643 6789999999998321 121 11345 8899
Q ss_pred EEeee
Q 024306 205 LDVGT 209 (269)
Q Consensus 205 iDv~~ 209 (269)
+|+..
T Consensus 87 i~~~~ 91 (209)
T 2raf_A 87 VDITN 91 (209)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 99864
No 117
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=97.31 E-value=0.0003 Score=63.33 Aligned_cols=74 Identities=18% Similarity=0.266 Sum_probs=57.2
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC----------------CCHhhhcCCCCEEEeccCCCCc---cc-
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT----------------KNPEQITSEADIVIAAAGVANL---VR- 194 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t----------------~~l~~~~~~aDiVIsAtg~p~~---i~- 194 (269)
-++|.|||.|.+ |.+++..|.+.|. +|++++++. .++.+.+++||+||.+++.+.. +.
T Consensus 24 ~~~I~iIG~G~m-G~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~ 102 (312)
T 3qsg_A 24 AMKLGFIGFGEA-ASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQ 102 (312)
T ss_dssp -CEEEEECCSHH-HHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHH
T ss_pred CCEEEEECccHH-HHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHh
Confidence 468999999887 9999999999999 999999851 3566778899999999986442 11
Q ss_pred -CCCcCCCcEEEEeeec
Q 024306 195 -GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 195 -~~~~~~g~vViDv~~~ 210 (269)
...++++.+|||+...
T Consensus 103 l~~~l~~~~ivvd~st~ 119 (312)
T 3qsg_A 103 AGPHLCEGALYADFTSC 119 (312)
T ss_dssp HGGGCCTTCEEEECCCC
T ss_pred hHhhcCCCCEEEEcCCC
Confidence 1346678888887643
No 118
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=97.30 E-value=0.00017 Score=63.30 Aligned_cols=71 Identities=17% Similarity=0.297 Sum_probs=54.6
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC-------------HhhhcCCCCEEEeccCCCC-c---cc--CCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN-------------PEQITSEADIVIAAAGVAN-L---VR--GSW 197 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~-------------l~~~~~~aDiVIsAtg~p~-~---i~--~~~ 197 (269)
++|.|||.|.+ |.+++..|.+ |.+|++++++... +.+.++++|+||.+++.+. . +. ...
T Consensus 2 ~~i~iiG~G~~-G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~ 79 (289)
T 2cvz_A 2 EKVAFIGLGAM-GYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPY 79 (289)
T ss_dssp CCEEEECCSTT-HHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTT
T ss_pred CeEEEEcccHH-HHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHHHHHHhh
Confidence 36999999886 9999999999 9999999876321 3355778999999999653 1 21 245
Q ss_pred cCCCcEEEEeee
Q 024306 198 LKPGAVVLDVGT 209 (269)
Q Consensus 198 ~~~g~vViDv~~ 209 (269)
++++.+|+|+..
T Consensus 80 l~~~~~vv~~s~ 91 (289)
T 2cvz_A 80 LREGTYWVDATS 91 (289)
T ss_dssp CCTTEEEEECSC
T ss_pred CCCCCEEEECCC
Confidence 778999999864
No 119
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.27 E-value=0.00024 Score=60.52 Aligned_cols=73 Identities=16% Similarity=0.200 Sum_probs=54.8
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------CHhhhcCCCCEEEeccCCCC---ccc-CCCc
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVIAAAGVAN---LVR-GSWL 198 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------~l~~~~~~aDiVIsAtg~p~---~i~-~~~~ 198 (269)
.+++.|||+|.+ |++++..|.+.|.+|++++|+.. ++.+.++++|+||.+++... .+. ...+
T Consensus 28 ~~~I~iiG~G~~-G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~~~~~~v~~l~~~~ 106 (215)
T 2vns_A 28 APKVGILGSGDF-ARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFREHYSSLCSLSDQL 106 (215)
T ss_dssp -CCEEEECCSHH-HHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCGGGSGGGGGGHHHH
T ss_pred CCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCChHHHHHHHHHHHhc
Confidence 468999998876 99999999999999999987632 34466789999999998422 221 1122
Q ss_pred CCCcEEEEeeec
Q 024306 199 KPGAVVLDVGTC 210 (269)
Q Consensus 199 ~~g~vViDv~~~ 210 (269)
++++|+|+...
T Consensus 107 -~~~~vv~~s~g 117 (215)
T 2vns_A 107 -AGKILVDVSNP 117 (215)
T ss_dssp -TTCEEEECCCC
T ss_pred -CCCEEEEeCCC
Confidence 78999999854
No 120
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=97.25 E-value=0.00023 Score=63.75 Aligned_cols=71 Identities=24% Similarity=0.362 Sum_probs=55.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----cccC---
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVRG--- 195 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i~~--- 195 (269)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+..
T Consensus 31 ~~I~iIG~G~m-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~ 109 (316)
T 2uyy_A 31 KKIGFLGLGLM-GSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSG 109 (316)
T ss_dssp SCEEEECCSHH-HHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CeEEEEcccHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchh
Confidence 67999999886 9999999999999999998753 244566778999999999533 2221
Q ss_pred --CCcCCCcEEEEee
Q 024306 196 --SWLKPGAVVLDVG 208 (269)
Q Consensus 196 --~~~~~g~vViDv~ 208 (269)
+.++++.+|+|+.
T Consensus 110 ~~~~l~~~~~vv~~s 124 (316)
T 2uyy_A 110 VLQGIRPGKCYVDMS 124 (316)
T ss_dssp GGGGCCTTCEEEECS
T ss_pred HhhcCCCCCEEEECC
Confidence 4577899999986
No 121
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=97.20 E-value=0.00034 Score=61.77 Aligned_cols=70 Identities=23% Similarity=0.366 Sum_probs=54.4
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----cccC----
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVRG---- 195 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i~~---- 195 (269)
+|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+..
T Consensus 2 ~i~iiG~G~m-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 2 PVGFIGLGNM-GNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CEEEECCSTT-HHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred eEEEEeccHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 6899999886 9999999999999999998763 245566788999999997643 2221
Q ss_pred -CCcCCCcEEEEee
Q 024306 196 -SWLKPGAVVLDVG 208 (269)
Q Consensus 196 -~~~~~g~vViDv~ 208 (269)
..++++.+|+|..
T Consensus 81 ~~~l~~~~~vv~~s 94 (296)
T 2gf2_A 81 LKKVKKGSLLIDSS 94 (296)
T ss_dssp GGTCCTTCEEEECS
T ss_pred HhcCCCCCEEEECC
Confidence 2467889999954
No 122
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=97.18 E-value=0.00033 Score=62.01 Aligned_cols=72 Identities=24% Similarity=0.407 Sum_probs=56.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----ccc--C-
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVR--G- 195 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i~--~- 195 (269)
.+|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+. .
T Consensus 5 ~~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~ 83 (301)
T 3cky_A 5 IKIGFIGLGAM-GKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGG 83 (301)
T ss_dssp CEEEEECCCTT-HHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcch
Confidence 57999999886 9999999999999999997752 245566788999999998643 232 1
Q ss_pred --CCcCCCcEEEEeee
Q 024306 196 --SWLKPGAVVLDVGT 209 (269)
Q Consensus 196 --~~~~~g~vViDv~~ 209 (269)
..++++.+|+|+..
T Consensus 84 l~~~l~~~~~vv~~~~ 99 (301)
T 3cky_A 84 VLSACKAGTVIVDMSS 99 (301)
T ss_dssp HHHHSCTTCEEEECCC
T ss_pred HhhcCCCCCEEEECCC
Confidence 24678999999864
No 123
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=97.18 E-value=0.00033 Score=61.97 Aligned_cols=72 Identities=19% Similarity=0.296 Sum_probs=56.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----ccc--C-
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVR--G- 195 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i~--~- 195 (269)
.+|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+. .
T Consensus 6 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~ 84 (299)
T 1vpd_A 6 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG 84 (299)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred ceEEEECchHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcch
Confidence 37999999886 9999999999999999997752 345566788999999998543 231 1
Q ss_pred --CCcCCCcEEEEeee
Q 024306 196 --SWLKPGAVVLDVGT 209 (269)
Q Consensus 196 --~~~~~g~vViDv~~ 209 (269)
..++++.+|+|+..
T Consensus 85 l~~~l~~~~~vv~~s~ 100 (299)
T 1vpd_A 85 IIEGAKPGTVLIDMSS 100 (299)
T ss_dssp HHHHCCTTCEEEECSC
T ss_pred HhhcCCCCCEEEECCC
Confidence 24678999999864
No 124
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=97.13 E-value=0.00061 Score=57.81 Aligned_cols=56 Identities=13% Similarity=0.145 Sum_probs=46.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCCC---------------------CHhhhcCCCCEEEeccCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK---------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~ 189 (269)
+++|+++|.|++|-+|+.++..|+++|+ +|+++.|... ++.+.++..|+||+..|.
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~ 94 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT 94 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence 5689999999988889999999999999 9999877531 234556788999998884
No 125
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=97.12 E-value=0.00033 Score=61.02 Aligned_cols=75 Identities=16% Similarity=0.179 Sum_probs=56.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCCC---------------CCHhhhcCCCCEEEeccCCCC---ccc
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT---------------KNPEQITSEADIVIAAAGVAN---LVR 194 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~-Vti~~~~t---------------~~l~~~~~~aDiVIsAtg~p~---~i~ 194 (269)
+.+.+|.|||.|.+ |..++..|.+.|.+ |++++++. .++.+.++++|+||.+++... .+.
T Consensus 8 ~~~m~i~iiG~G~m-G~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~ 86 (266)
T 3d1l_A 8 IEDTPIVLIGAGNL-ATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQ 86 (266)
T ss_dssp GGGCCEEEECCSHH-HHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHHHH
T ss_pred CCCCeEEEEcCCHH-HHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHHHH
Confidence 45678999999886 99999999999988 88887752 245566789999999998432 121
Q ss_pred --CCCcCCCcEEEEeee
Q 024306 195 --GSWLKPGAVVLDVGT 209 (269)
Q Consensus 195 --~~~~~~g~vViDv~~ 209 (269)
...++++++|+|+..
T Consensus 87 ~l~~~~~~~~ivv~~s~ 103 (266)
T 3d1l_A 87 GIVEGKREEALMVHTAG 103 (266)
T ss_dssp HHHTTCCTTCEEEECCT
T ss_pred HHHhhcCCCcEEEECCC
Confidence 124668889999863
No 126
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=96.17 E-value=7.7e-05 Score=63.26 Aligned_cols=76 Identities=16% Similarity=0.155 Sum_probs=55.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------CHhhhcCCCCEEEeccCCCC---cccCCCc
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NPEQITSEADIVIAAAGVAN---LVRGSWL 198 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------~l~~~~~~aDiVIsAtg~p~---~i~~~~~ 198 (269)
+.++++.|||.|.+ |.+++..|.+.|.+|++++|+.. ++.+.++++|+||.+++... .+.-...
T Consensus 17 ~~~~~I~iIG~G~m-G~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~~~~~v~~l~~~ 95 (201)
T 2yjz_A 17 EKQGVVCIFGTGDF-GKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHREHYDFLAELADS 95 (201)
Confidence 46678999999886 99999999999988998876532 23355778999999998532 2211113
Q ss_pred CCCcEEEEeeec
Q 024306 199 KPGAVVLDVGTC 210 (269)
Q Consensus 199 ~~g~vViDv~~~ 210 (269)
.++.+|||+...
T Consensus 96 ~~~~ivI~~~~G 107 (201)
T 2yjz_A 96 LKGRVLIDVSNN 107 (201)
Confidence 468899998743
No 127
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=97.09 E-value=0.0054 Score=55.03 Aligned_cols=144 Identities=15% Similarity=0.168 Sum_probs=101.6
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHH-HHhcCCcccccccccccee
Q 024306 27 RNKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGK-ILDAVSLEKDVDGFHPLNI 103 (269)
Q Consensus 27 ~~~~~~~~~~Gi~~~~~~~~~~~--~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~-i~~~i~p~kdvdg~~~~n~ 103 (269)
-+-..+++++|.++.++.-.... .-|-+.+.++-|+. -.+|+|.+--|-...+ .. +.+.. .+-.+|.
T Consensus 50 ~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~-~~~D~iviR~~~~~~~--~~~la~~~-------~vPVINA 119 (291)
T 3d6n_B 50 LSFEKAARELGIETYLVSGSESSTVKGESFFDTLKTFEG-LGFDYVVFRVPFVFFP--YKEIVKSL-------NLRLVNA 119 (291)
T ss_dssp HHHHHHHHHTTCEEEEEETTTTSCCTTCCHHHHHHHHHH-TTCSEEEEEESSCCCS--CHHHHHTC-------SSEEEEE
T ss_pred HHHHHHHHHhCCeEEEECCccCcccCCCcHHHHHHHHHH-hcCCEEEEEcCChHHH--HHHHHHhC-------CCCEEeC
Confidence 34567899999999988643211 13457778887777 3468999998866544 33 33322 1234453
Q ss_pred cccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcC--CcccHHHHHHHHHhCCCEEEEEeCC-----------
Q 024306 104 GNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGR--SNIVGLPTSLLLQRHHATVSIVHAL----------- 169 (269)
Q Consensus 104 g~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~--gg~vg~~~a~~L~~~ga~Vti~~~~----------- 169 (269)
| ..+.+.||=+.+ ++.+.++. ..++|.+|+++|- ++.|++.++..+...|++|+++...
T Consensus 120 G------~g~~~HPtQaLaDl~Ti~e~~-g~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g 192 (291)
T 3d6n_B 120 G------DGTHQHPSQGLIDFFTIKEHF-GEVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFK 192 (291)
T ss_dssp E------ETTTBCHHHHHHHHHHHHHHH-SCCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGC
T ss_pred c------cCCCcCcHHHHHHHHHHHHHh-CCcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCC
Confidence 2 234566888877 44444544 4799999999998 7778999999999999999999643
Q ss_pred ---CCCHhhhcCCCCEEEeccC
Q 024306 170 ---TKNPEQITSEADIVIAAAG 188 (269)
Q Consensus 170 ---t~~l~~~~~~aDiVIsAtg 188 (269)
+.++.+.+++||+|.+ +-
T Consensus 193 ~~~~~d~~eav~~aDvvy~-~~ 213 (291)
T 3d6n_B 193 VDVFDDVDKGIDWADVVIW-LR 213 (291)
T ss_dssp EEEESSHHHHHHHCSEEEE-CC
T ss_pred CEEEcCHHHHhCCCCEEEE-eC
Confidence 2457788999999998 54
No 128
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=97.08 E-value=0.0017 Score=56.33 Aligned_cols=79 Identities=18% Similarity=0.264 Sum_probs=54.6
Q ss_pred CCccceEEEEcCC----------------cccHHHHHHHHHhCCCEEEEEeCCCC-------------C-------Hhhh
Q 024306 133 EIMGKNAVVIGRS----------------NIVGLPTSLLLQRHHATVSIVHALTK-------------N-------PEQI 176 (269)
Q Consensus 133 ~l~gk~v~ViG~g----------------g~vg~~~a~~L~~~ga~Vti~~~~t~-------------~-------l~~~ 176 (269)
+++||+|+|-|+| |-+|+++|..|+.+||+|+++++... + ..+.
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~~~g~~~~dv~~~~~~~~~v~~~ 84 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNAS 84 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccccCCCCeEEccCcHHHHHHHHHHh
Confidence 4789999999992 43499999999999999999865421 1 1133
Q ss_pred cCCCCEEEeccCCCCc----ccCCCcCC---C--cEEEEeeecC
Q 024306 177 TSEADIVIAAAGVANL----VRGSWLKP---G--AVVLDVGTCP 211 (269)
Q Consensus 177 ~~~aDiVIsAtg~p~~----i~~~~~~~---g--~vViDv~~~~ 211 (269)
....|++|++.+...+ ....-+++ + ...+.+.-+|
T Consensus 85 ~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~p 128 (226)
T 1u7z_A 85 VQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNP 128 (226)
T ss_dssp GGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECC
T ss_pred cCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecH
Confidence 4678999999885432 33445665 2 4667777766
No 129
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=97.05 E-value=0.00071 Score=59.56 Aligned_cols=71 Identities=18% Similarity=0.264 Sum_probs=55.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------CCHhhhcCCCCEEEeccCCCC----ccc----
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVR---- 194 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------~~l~~~~~~aDiVIsAtg~p~----~i~---- 194 (269)
.+|.|||.|.+ |.+++..|.+.|.+|++++ +. .++.+.++++|+||.+++.+. .+.
T Consensus 4 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~ 81 (295)
T 1yb4_A 4 MKLGFIGLGIM-GSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHG 81 (295)
T ss_dssp CEEEECCCSTT-HHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTS
T ss_pred CEEEEEccCHH-HHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchh
Confidence 47999999886 9999999999999999887 42 234566788999999998653 222
Q ss_pred -CCCcCCCcEEEEeee
Q 024306 195 -GSWLKPGAVVLDVGT 209 (269)
Q Consensus 195 -~~~~~~g~vViDv~~ 209 (269)
...++++.+|+|+..
T Consensus 82 l~~~l~~~~~vv~~s~ 97 (295)
T 1yb4_A 82 CAKTSLQGKTIVDMSS 97 (295)
T ss_dssp STTSCCTTEEEEECSC
T ss_pred HhhcCCCCCEEEECCC
Confidence 134678999999864
No 130
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.05 E-value=0.00079 Score=55.24 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=43.7
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcCCCCEEEeccCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~ 189 (269)
+++|+|+|++|.+|+.++..|.++|++|+++.|+.. ++.+.++.+|+||+++|.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 478999999888899999999999999999876521 234566778999988774
No 131
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=97.02 E-value=0.00053 Score=60.17 Aligned_cols=72 Identities=18% Similarity=0.251 Sum_probs=55.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC----------------CCHhhhcC-CCCEEEeccCCCC---ccc
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------KNPEQITS-EADIVIAAAGVAN---LVR 194 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t----------------~~l~~~~~-~aDiVIsAtg~p~---~i~ 194 (269)
++|.|||.|.+ |.+++..|.+.|. +|++++++. .++.+.++ ++|+||.+++... .+.
T Consensus 2 ~~I~iIG~G~m-G~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFM-GGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAK 80 (281)
T ss_dssp CEEEEESCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHHH
T ss_pred cEEEEEecCHH-HHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHHHH
Confidence 47999999886 9999999999997 899987642 24556778 9999999998432 221
Q ss_pred --CCCcCCCcEEEEeee
Q 024306 195 --GSWLKPGAVVLDVGT 209 (269)
Q Consensus 195 --~~~~~~g~vViDv~~ 209 (269)
...++++.+|+|++.
T Consensus 81 ~l~~~l~~~~iv~~~~~ 97 (281)
T 2g5c_A 81 KLSYILSEDATVTDQGS 97 (281)
T ss_dssp HHHHHSCTTCEEEECCS
T ss_pred HHHhhCCCCcEEEECCC
Confidence 124678899999864
No 132
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=97.02 E-value=0.0015 Score=58.43 Aligned_cols=69 Identities=17% Similarity=0.162 Sum_probs=53.2
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------------
Q 024306 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------------ 171 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------------------ 171 (269)
+|.+++-+...+. +++++|+|.|++|.+|+.++..|.++|.+|+++.|...
T Consensus 10 ~~~~~~~~~~~~~-----~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (351)
T 3ruf_A 10 YMSRYEEITQQLI-----FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFI 84 (351)
T ss_dssp CCHHHHHHHHHHH-----HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEE
T ss_pred HHHHHhhHHhhCC-----CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEE
Confidence 3555566555443 46899999999999999999999999999999877421
Q ss_pred --------CHhhhcCCCCEEEeccCC
Q 024306 172 --------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 172 --------~l~~~~~~aDiVIsAtg~ 189 (269)
++.+.++++|+||...+.
T Consensus 85 ~~Dl~d~~~~~~~~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 85 EGDIRDLTTCEQVMKGVDHVLHQAAL 110 (351)
T ss_dssp ECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred EccCCCHHHHHHHhcCCCEEEECCcc
Confidence 134567789999988874
No 133
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.02 E-value=0.0011 Score=60.62 Aligned_cols=94 Identities=15% Similarity=0.190 Sum_probs=64.9
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---------------------Hh
Q 024306 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PE 174 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~---------------------l~ 174 (269)
+||....++..++..+....|++|+|+|+|+ +|..+++++...|++|+++.++... +.
T Consensus 168 l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~-vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~ 246 (366)
T 1yqd_A 168 LLCAGITVYSPLKYFGLDEPGKHIGIVGLGG-LGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQ 246 (366)
T ss_dssp GGTHHHHHHHHHHHTTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHH
T ss_pred hhhhHHHHHHHHHhcCcCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHH
Confidence 4555555566777666554899999999876 5999999999999998877654321 11
Q ss_pred hhcCCCCEEEeccCCCCccc--CCCcCCCcEEEEeeec
Q 024306 175 QITSEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 175 ~~~~~aDiVIsAtg~p~~i~--~~~~~~g~vViDv~~~ 210 (269)
+....+|+||+++|.+..+. -+.++++-.++.++..
T Consensus 247 ~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 247 AAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp HTTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCC
T ss_pred HhhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccC
Confidence 22345799999998754322 2356777777777754
No 134
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=97.02 E-value=0.00087 Score=59.04 Aligned_cols=57 Identities=19% Similarity=0.242 Sum_probs=46.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------------CHhhhcCCCCEEEecc
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------------NPEQITSEADIVIAAA 187 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------------------~l~~~~~~aDiVIsAt 187 (269)
.+|+||.++|.|++.-+|+++++.|+++|++|.++.|... ...+....-|++|+..
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnA 86 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHML 86 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECC
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4789999999998887899999999999999999987531 1123345679999887
Q ss_pred C
Q 024306 188 G 188 (269)
Q Consensus 188 g 188 (269)
|
T Consensus 87 G 87 (261)
T 4h15_A 87 G 87 (261)
T ss_dssp C
T ss_pred C
Confidence 7
No 135
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.00 E-value=0.0009 Score=55.64 Aligned_cols=53 Identities=15% Similarity=0.160 Sum_probs=43.7
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHh------------------hhcCCCCEEEeccCCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPE------------------QITSEADIVIAAAGVA 190 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~------------------~~~~~aDiVIsAtg~p 190 (269)
+|+|+|++|.+|+.++..|+++|++|+++.|....+. +.+..+|+||+..|.+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence 6999999888899999999999999999988632111 4677899999998853
No 136
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.99 E-value=0.00045 Score=53.57 Aligned_cols=56 Identities=25% Similarity=0.218 Sum_probs=41.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------C---Hhhh-cCCCCEEEeccCCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------N---PEQI-TSEADIVIAAAGVA 190 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------------~---l~~~-~~~aDiVIsAtg~p 190 (269)
+++++++|+|+|.. |+.++..|.+.|++|+++.+... + +.+. +.++|+||.+++.+
T Consensus 4 ~~~~~v~I~G~G~i-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 4 IKNKQFAVIGLGRF-GGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp --CCSEEEECCSHH-HHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CcCCcEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 46789999999665 99999999999999988876420 1 1121 56789999888864
No 137
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.98 E-value=0.001 Score=63.62 Aligned_cols=78 Identities=15% Similarity=0.242 Sum_probs=57.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------------CCHhhhcCC---CCEEEeccCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------KNPEQITSE---ADIVIAAAGVA 190 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------------~~l~~~~~~---aDiVIsAtg~p 190 (269)
-..+.++|.|||.|.+ |.+++..|++.|.+|++.+|+. .++.+.+++ +|+||.+++.+
T Consensus 11 ~~~~~~~IgvIGlG~M-G~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~ 89 (480)
T 2zyd_A 11 HHMSKQQIGVVGMAVM-GRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAG 89 (480)
T ss_dssp ----CBSEEEECCSHH-HHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred cccCCCeEEEEccHHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCH
Confidence 3456788999999887 9999999999999999998762 234455555 99999999874
Q ss_pred Cc----cc--CCCcCCCcEEEEeeec
Q 024306 191 NL----VR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 191 ~~----i~--~~~~~~g~vViDv~~~ 210 (269)
.. +. ...++++.+|||++..
T Consensus 90 ~~v~~vl~~l~~~l~~g~iIId~s~g 115 (480)
T 2zyd_A 90 AGTDAAIDSLKPYLDKGDIIIDGGNT 115 (480)
T ss_dssp SHHHHHHHHHGGGCCTTCEEEECSCC
T ss_pred HHHHHHHHHHHhhcCCCCEEEECCCC
Confidence 31 21 1346789999998743
No 138
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=96.97 E-value=0.0008 Score=58.90 Aligned_cols=69 Identities=22% Similarity=0.216 Sum_probs=52.9
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------CCHhhhcCCCCEEEeccCCCC---ccc--CC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVR--GS 196 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------~~l~~~~~~aDiVIsAtg~p~---~i~--~~ 196 (269)
+|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+. +++|+||.+++... .+. ..
T Consensus 2 ~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~~~l~~ 79 (279)
T 2f1k_A 2 KIGVVGLGLI-GASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTLEKLIP 79 (279)
T ss_dssp EEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHHHHHGG
T ss_pred EEEEEcCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHHHHHHh
Confidence 6899999886 9999999999999999997652 234455 78999999998422 221 23
Q ss_pred CcCCCcEEEEee
Q 024306 197 WLKPGAVVLDVG 208 (269)
Q Consensus 197 ~~~~g~vViDv~ 208 (269)
.++++++|+|++
T Consensus 80 ~~~~~~~vv~~~ 91 (279)
T 2f1k_A 80 HLSPTAIVTDVA 91 (279)
T ss_dssp GSCTTCEEEECC
T ss_pred hCCCCCEEEECC
Confidence 467889999984
No 139
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.94 E-value=0.0012 Score=59.12 Aligned_cols=58 Identities=16% Similarity=0.076 Sum_probs=44.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------CHhhhcCCCCEEEeccCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------~l~~~~~~aDiVIsAtg~ 189 (269)
.+.++|+|+|.|++|.+|+.++..|+++|++|+++.|... .+.+.+++.|+||...+.
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 4568899999999998999999999999999999877531 245677899999988774
No 140
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.92 E-value=0.00089 Score=56.19 Aligned_cols=53 Identities=26% Similarity=0.208 Sum_probs=44.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------CHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------------~l~~~~~~aDiVIsAtg~ 189 (269)
++|+|.|++|.+|+.++..|.++|.+|+++.|... ++.+.+++.|+||+++|.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 68999999999999999999999999999977621 234667889999988874
No 141
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.91 E-value=0.0014 Score=58.26 Aligned_cols=70 Identities=17% Similarity=0.235 Sum_probs=51.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------------------------------CCH
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------------------------------KNP 173 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------------------------------~~l 173 (269)
++|.|||+|.+ |.++|..|++.|.+|++++++. .++
T Consensus 16 ~~I~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~ 94 (302)
T 1f0y_A 16 KHVTVIGGGLM-GAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDA 94 (302)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCH
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCH
Confidence 68999999886 9999999999999999997652 123
Q ss_pred hhhcCCCCEEEeccCCCC-----ccc--CCCcCCCcEEEEe
Q 024306 174 EQITSEADIVIAAAGVAN-----LVR--GSWLKPGAVVLDV 207 (269)
Q Consensus 174 ~~~~~~aDiVIsAtg~p~-----~i~--~~~~~~g~vViDv 207 (269)
.+.+++||+||.+++... ++. ...++++++|+..
T Consensus 95 ~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ 135 (302)
T 1f0y_A 95 ASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASN 135 (302)
T ss_dssp HHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEEC
T ss_pred HHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEEC
Confidence 346789999999997431 111 2245667777653
No 142
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.90 E-value=0.0018 Score=58.61 Aligned_cols=94 Identities=19% Similarity=0.121 Sum_probs=65.2
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhh---------------hcCCC
Q 024306 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQ---------------ITSEA 180 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~~---------------~~~~a 180 (269)
+||....+...+++.++ -.|.+|+|+|+|+ +|..+++++...|++|+.+.++...++. ..+.+
T Consensus 158 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~ 235 (348)
T 3two_A 158 LLCAGITTYSPLKFSKV-TKGTKVGVAGFGG-LGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEEL 235 (348)
T ss_dssp GGTHHHHHHHHHHHTTC-CTTCEEEEESCSH-HHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCE
T ss_pred hhhhHHHHHHHHHhcCC-CCCCEEEEECCcH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCC
Confidence 45554555666765533 3799999999966 5999999999999998887665433221 11257
Q ss_pred CEEEeccCCCCcc--cCCCcCCCcEEEEeeecC
Q 024306 181 DIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 181 DiVIsAtg~p~~i--~~~~~~~g~vViDv~~~~ 211 (269)
|+||+++|.+..+ .-+.++++-.++.+|...
T Consensus 236 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 236 DFIISTIPTHYDLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp EEEEECCCSCCCHHHHHTTEEEEEEEEECCCCC
T ss_pred CEEEECCCcHHHHHHHHHHHhcCCEEEEECCCC
Confidence 8999999977432 335678877788887643
No 143
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=96.90 E-value=0.0023 Score=59.07 Aligned_cols=94 Identities=17% Similarity=0.218 Sum_probs=65.7
Q ss_pred ccCCHHHHHHHH----HHhCC-CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------CHhhhc
Q 024306 116 IPCTPKGCIELL----IRSGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQIT 177 (269)
Q Consensus 116 ~p~t~~g~~~~l----~~~~~-~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------~l~~~~ 177 (269)
.+.|++|++..+ ++.+. +++||+|+|+|.|.+ |+.+++.|...|++|.++++... +..+.+
T Consensus 150 ~~aTg~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnV-G~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell 228 (355)
T 1c1d_A 150 AFTTAVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAV-GGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVL 228 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGG
T ss_pred hhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhh
Confidence 367888876554 55687 899999999999886 99999999999999987764421 122334
Q ss_pred C-CCCEEEeccCCCCcccCCCcC--CCcEEEEeeecC
Q 024306 178 S-EADIVIAAAGVANLVRGSWLK--PGAVVLDVGTCP 211 (269)
Q Consensus 178 ~-~aDiVIsAtg~p~~i~~~~~~--~g~vViDv~~~~ 211 (269)
. .+||++.+ ...+.|+.+.++ +..+|+..+-.|
T Consensus 229 ~~~~DIliP~-A~~~~I~~~~~~~lk~~iVie~AN~p 264 (355)
T 1c1d_A 229 STPCDVFAPC-AMGGVITTEVARTLDCSVVAGAANNV 264 (355)
T ss_dssp GCCCSEEEEC-SCSCCBCHHHHHHCCCSEECCSCTTC
T ss_pred cCccceecHh-HHHhhcCHHHHhhCCCCEEEECCCCC
Confidence 4 78998854 345566654322 256777766433
No 144
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=96.90 E-value=0.012 Score=53.19 Aligned_cols=149 Identities=10% Similarity=0.067 Sum_probs=103.2
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCC----CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccc
Q 024306 22 SQTYVRNKIKACEEVGIKSIVTEFADG----CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDG 97 (269)
Q Consensus 22 s~~y~~~~~~~~~~~Gi~~~~~~~~~~----~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg 97 (269)
|-.=--+-..++.++|.++.++.-... ..-|-+.+..+-|+.- +|+|.+-.|-.. ....+.+.. ..
T Consensus 52 STRTR~SFe~A~~~LGg~~i~l~~~~~~S~~~kgEsl~DTarvls~~--~D~iviR~~~~~--~~~~la~~~------~~ 121 (310)
T 3csu_A 52 STRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTY--VDAIVMRHPQEG--AARLATEFS------GN 121 (310)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEESCC-----CCSHHHHHHHHHHHTTT--CSEEEEEESSTT--HHHHHHHHC------TT
T ss_pred CccHHHHHHHHHHHhCCeEEEeCCCccchhhccCCcHHHHHHHHHHh--CCEEEEECCChh--HHHHHHHhc------CC
Confidence 443344466799999999988854332 1357899999999884 799999988443 223333322 12
Q ss_pred cccceecccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhC-CCEEEEEeCC----
Q 024306 98 FHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL---- 169 (269)
Q Consensus 98 ~~~~n~g~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~g--g~vg~~~a~~L~~~-ga~Vti~~~~---- 169 (269)
+-.+|.|. | +.+.||=+.+ ++.+.++. ..++|.+|+++|-+ +-|++.++..+... |++|+++...
T Consensus 122 vPVINag~---G---~~~HPtQaLaDl~Ti~e~~-g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~ 194 (310)
T 3csu_A 122 VPVLNAGD---G---SNQHPTQTLLDLFTIQETQ-GRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAM 194 (310)
T ss_dssp CCEEEEEE---T---TSCCHHHHHHHHHHHHHHH-SCSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCC
T ss_pred CCEEcCcc---C---CCCCchHHHHHHHHHHHHh-CCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCccccc
Confidence 33456422 1 3456888887 44555554 47999999999986 45799999999999 9999999543
Q ss_pred -----------------CCCHhhhcCCCCEEEecc
Q 024306 170 -----------------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 -----------------t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+.+++||+|.+-.
T Consensus 195 ~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~ 229 (310)
T 3csu_A 195 PQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTR 229 (310)
T ss_dssp CHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC
T ss_pred CHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECC
Confidence 245678899999999764
No 145
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.88 E-value=0.0013 Score=52.60 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=31.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
....+++|+|+|+|.. |+.++..|...|++|+++.++
T Consensus 15 ~~~~~~~v~IiG~G~i-G~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRL-GSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESC
T ss_pred cccCCCcEEEECCCHH-HHHHHHHHHhCCCeEEEEECC
Confidence 4567899999999775 999999999999999999764
No 146
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=96.88 E-value=0.0011 Score=57.22 Aligned_cols=69 Identities=17% Similarity=0.249 Sum_probs=51.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC----EEEEEeCCC---------------CCHhhhcCCCCEEEeccCCCC---ccc
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA----TVSIVHALT---------------KNPEQITSEADIVIAAAGVAN---LVR 194 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga----~Vti~~~~t---------------~~l~~~~~~aDiVIsAtg~p~---~i~ 194 (269)
++|.|||.|.+ |.+++..|.+.|. +|++++|+. .+..+.++++|+||.++.... .+.
T Consensus 3 ~~i~iIG~G~m-G~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~~~~~v~~ 81 (247)
T 3gt0_A 3 KQIGFIGCGNM-GMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPDLYASIIN 81 (247)
T ss_dssp CCEEEECCSHH-HHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTTTHHHHC-
T ss_pred CeEEEECccHH-HHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHHHHHHHHH
Confidence 57999999887 9999999999997 899998762 345667788999999995321 121
Q ss_pred --CCCcCCCcEEEE
Q 024306 195 --GSWLKPGAVVLD 206 (269)
Q Consensus 195 --~~~~~~g~vViD 206 (269)
...++++++|+.
T Consensus 82 ~l~~~l~~~~~vvs 95 (247)
T 3gt0_A 82 EIKEIIKNDAIIVT 95 (247)
T ss_dssp --CCSSCTTCEEEE
T ss_pred HHHhhcCCCCEEEE
Confidence 124567777764
No 147
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=96.87 E-value=0.0025 Score=56.07 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=36.1
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
..+|+||.++|-|++.-+|++++..|+++||+|.++.++.
T Consensus 2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~ 41 (258)
T 4gkb_A 2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHA 41 (258)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCc
Confidence 3679999999999988889999999999999999998764
No 148
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.86 E-value=0.0011 Score=55.71 Aligned_cols=54 Identities=15% Similarity=0.189 Sum_probs=43.8
Q ss_pred ceEEEEcCCcccHHHHHHHHH-hCCCEEEEEeCCCC------------------------CHhhhcCCCCEEEeccCCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHALTK------------------------NPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~-~~ga~Vti~~~~t~------------------------~l~~~~~~aDiVIsAtg~p 190 (269)
|+++|.|++|-+|++++..|+ ++|++|+++.|+.. ++.+.++++|+||++.|..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 679999988888999999999 89999999877532 1235677889999888854
No 149
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=96.84 E-value=0.001 Score=60.00 Aligned_cols=72 Identities=8% Similarity=0.134 Sum_probs=53.6
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCC----CEEEEEeCCCC----------------CHhhhcCCCCEEEeccCCCC---c
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALTK----------------NPEQITSEADIVIAAAGVAN---L 192 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~g----a~Vti~~~~t~----------------~l~~~~~~aDiVIsAtg~p~---~ 192 (269)
..+|.|||.|.+ |.+++..|.+.| .+|++++|+.. +..+.++++|+||.+++... .
T Consensus 22 ~mkI~iIG~G~m-G~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~~~~~~v 100 (322)
T 2izz_A 22 SMSVGFIGAGQL-AFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHIIPFI 100 (322)
T ss_dssp CCCEEEESCSHH-HHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCGGGHHHH
T ss_pred CCEEEEECCCHH-HHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCHHHHHHH
Confidence 357999999886 999999999999 67999988642 23455678999999998321 1
Q ss_pred cc--CCCcCCCcEEEEee
Q 024306 193 VR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 193 i~--~~~~~~g~vViDv~ 208 (269)
+. ...++++.+|+|+.
T Consensus 101 l~~l~~~l~~~~ivvs~s 118 (322)
T 2izz_A 101 LDEIGADIEDRHIVVSCA 118 (322)
T ss_dssp HHHHGGGCCTTCEEEECC
T ss_pred HHHHHhhcCCCCEEEEeC
Confidence 11 12456788999974
No 150
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.84 E-value=0.00054 Score=61.97 Aligned_cols=95 Identities=17% Similarity=0.040 Sum_probs=64.5
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------CHhh--
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQ-- 175 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------------~l~~-- 175 (269)
|+.+..+...+.+..---.|++|+|+|+|+.+|..+++++...|++|+++.++.. ++.+
T Consensus 126 ~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~ 205 (340)
T 3gms_A 126 YINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETV 205 (340)
T ss_dssp SHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred cchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHH
Confidence 4444555555543333347999999999977799999999999999888865432 2211
Q ss_pred --hc--CCCCEEEeccCCCCcc-cCCCcCCCcEEEEeeecC
Q 024306 176 --IT--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 176 --~~--~~aDiVIsAtg~p~~i-~~~~~~~g~vViDv~~~~ 211 (269)
.+ +..|+||+++|.+... ..+.++++-.++.+|...
T Consensus 206 ~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~~ 246 (340)
T 3gms_A 206 MELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLS 246 (340)
T ss_dssp HHHTTTSCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTT
T ss_pred HHHhCCCCCcEEEECCCChhHHHHHHHhcCCCEEEEEeecC
Confidence 12 2589999999965431 225678888888888643
No 151
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=96.84 E-value=0.0023 Score=55.91 Aligned_cols=56 Identities=18% Similarity=0.261 Sum_probs=45.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC------------------------HhhhcCCCCEEEeccCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN------------------------PEQITSEADIVIAAAGV 189 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~------------------------l~~~~~~aDiVIsAtg~ 189 (269)
++||.++|-|++.-+|+++++.|+++||+|.++.++.+. +.+...+-|++||..|.
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi 88 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI 88 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 589999999998888999999999999999999876321 22445667899988774
No 152
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.84 E-value=0.0018 Score=57.29 Aligned_cols=71 Identities=20% Similarity=0.253 Sum_probs=52.6
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------------------------CCHhhhc
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------------KNPEQIT 177 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------------------------------~~l~~~~ 177 (269)
++|.|||+|.+ |.++|..|++.|.+|++++++. .++.+.+
T Consensus 5 ~kV~VIGaG~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~ 83 (283)
T 4e12_A 5 TNVTVLGTGVL-GSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAV 83 (283)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHT
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHh
Confidence 68999999886 9999999999999999997652 1234567
Q ss_pred CCCCEEEeccCCC-C----ccc--CCCcCCCcEEEEee
Q 024306 178 SEADIVIAAAGVA-N----LVR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 178 ~~aDiVIsAtg~p-~----~i~--~~~~~~g~vViDv~ 208 (269)
++||+||.+++.. . ++. ...+++++++++..
T Consensus 84 ~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 84 KDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 8999999999842 1 111 12356777777644
No 153
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.83 E-value=0.0022 Score=58.43 Aligned_cols=94 Identities=18% Similarity=0.228 Sum_probs=64.5
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCH---------------------h
Q 024306 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP---------------------E 174 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l---------------------~ 174 (269)
+||....+...+++.+....|.+|+|+|+|+ +|..+++++...|++|+++.+....+ .
T Consensus 161 l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~-vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~ 239 (357)
T 2cf5_A 161 LLCAGVTVYSPLSHFGLKQPGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMS 239 (357)
T ss_dssp GGTHHHHHHHHHHHTSTTSTTCEEEEECCSH-HHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHH
T ss_pred hhhhHHHHHHHHHhcCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHH
Confidence 3454444566676655544799999999876 59999999999999988776543211 1
Q ss_pred hhcCCCCEEEeccCCCCcc--cCCCcCCCcEEEEeeec
Q 024306 175 QITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 175 ~~~~~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
+....+|+||.++|.+..+ .-+.++++-.++.++..
T Consensus 240 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 277 (357)
T 2cf5_A 240 ELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVI 277 (357)
T ss_dssp HSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCC
T ss_pred HhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCC
Confidence 1223579999999876432 23467777777778754
No 154
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=96.82 E-value=0.0013 Score=57.19 Aligned_cols=37 Identities=16% Similarity=0.261 Sum_probs=33.2
Q ss_pred CCCccceEEEEcCC---cccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~g---g~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+|+||.++|.|++ |+ |+++|+.|+++||+|.++.|+
T Consensus 2 ~~l~gK~alVTGaa~~~GI-G~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSI-AFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp CCCTTCEEEEECCCSTTCH-HHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCCCCchH-HHHHHHHHHHCCCEEEEEECC
Confidence 46899999999975 65 999999999999999999776
No 155
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.82 E-value=0.0053 Score=55.41 Aligned_cols=143 Identities=11% Similarity=0.104 Sum_probs=98.8
Q ss_pred HHHHHHHHcCCeEEEEEcCCC-C-CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADG-C-TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~-~-~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..++.++|.++.++.-... . .-|-+.+.++-|.. -++|+|.+--|-.. ....+.+.. .+-.+|.|
T Consensus 53 SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~-~~~D~iviR~~~~~--~~~~la~~~-------~vPVINag- 121 (304)
T 3r7f_A 53 SFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRTLES-IGVDVCVIRHSEDE--YYEELVSQV-------NIPILNAG- 121 (304)
T ss_dssp HHHHHHHHTTCEEEEEETTSTTSCSSSCHHHHHHHHHH-HTCCEEEEECSSTT--CHHHHHHHC-------SSCEEESC-
T ss_pred hHHHHHHHCCCeEEEECcccccCCCCCCHHHHHHHHHH-hcCCEEEEecCChh--HHHHHHHhC-------CCCEEeCC-
Confidence 456789999999998853211 1 13457777777766 35789999988443 334443322 12234542
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhCCCEEEEEeCC-----------CC
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL-----------TK 171 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~g--g~vg~~~a~~L~~~ga~Vti~~~~-----------t~ 171 (269)
+.+.+.||=+.+ ++.+.|+.+ .++|.+|+++|-+ +-|++.++..+...|++|+++... +.
T Consensus 122 -----dg~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g~~~ 195 (304)
T 3r7f_A 122 -----DGCGQHPTQSLLDLMTIYEEFN-TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYV 195 (304)
T ss_dssp -----CTTSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTCSSCEEC
T ss_pred -----CCCCcCcHHHHHHHHHHHHHhC-CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcchhhcCccC
Confidence 234566988877 445555554 7999999999987 347999999999999999999643 23
Q ss_pred CHhhhcCCCCEEEecc
Q 024306 172 NPEQITSEADIVIAAA 187 (269)
Q Consensus 172 ~l~~~~~~aDiVIsAt 187 (269)
++.+.+++||+|++-.
T Consensus 196 d~~eav~~aDvvyt~~ 211 (304)
T 3r7f_A 196 SMDEAVESSDVVMLLR 211 (304)
T ss_dssp CHHHHHHHCSEEEECC
T ss_pred CHHHHhCCCCEEEecc
Confidence 6778899999999854
No 156
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.81 E-value=0.00074 Score=59.63 Aligned_cols=72 Identities=17% Similarity=0.309 Sum_probs=53.9
Q ss_pred ceEEEEcC-CcccHHHHHHHHHhCCCEEEEEeCCCC-------------CHhhhcCCCCEEEeccCCCC---ccc--CCC
Q 024306 137 KNAVVIGR-SNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVIAAAGVAN---LVR--GSW 197 (269)
Q Consensus 137 k~v~ViG~-gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------~l~~~~~~aDiVIsAtg~p~---~i~--~~~ 197 (269)
++|.|||. |.+ |.+++..|.+.|.+|++++++.. +..+.++++|+||.+++... .+. ...
T Consensus 12 m~I~iIG~tG~m-G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~ 90 (286)
T 3c24_A 12 KTVAILGAGGKM-GARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNIIEKVAEDIVPR 90 (286)
T ss_dssp CEEEEETTTSHH-HHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHHHHHHHHHHGGG
T ss_pred CEEEEECCCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchHHHHHHHHHHHh
Confidence 48999999 665 99999999999999999987531 33456788999999998422 121 123
Q ss_pred cCCCcEEEEeee
Q 024306 198 LKPGAVVLDVGT 209 (269)
Q Consensus 198 ~~~g~vViDv~~ 209 (269)
++++++|+|+..
T Consensus 91 l~~~~ivv~~s~ 102 (286)
T 3c24_A 91 VRPGTIVLILDA 102 (286)
T ss_dssp SCTTCEEEESCS
T ss_pred CCCCCEEEECCC
Confidence 577889988653
No 157
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.81 E-value=0.0011 Score=55.53 Aligned_cols=52 Identities=13% Similarity=0.144 Sum_probs=43.1
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------CHhhhcCCCCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------------~l~~~~~~aDiVIsAtg~ 189 (269)
+|+|.|++|.+|+.++..|.++|++|+++.|... ++.+.+++.|+||+.+|.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS 73 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence 6999999999999999999999999999987621 234567788999988874
No 158
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=96.80 E-value=0.0016 Score=62.91 Aligned_cols=166 Identities=14% Similarity=0.181 Sum_probs=111.4
Q ss_pred HHHHHHHHc-CCe---EEEEEcCCCCC--------------------------HHHHHHHHHhhhcCCCcCEEEEeCCCC
Q 024306 28 NKIKACEEV-GIK---SIVTEFADGCT--------------------------EDEVLNALSNYNQDSSINGILVQLPLP 77 (269)
Q Consensus 28 ~~~~~~~~~-Gi~---~~~~~~~~~~~--------------------------~~~l~~~i~~ln~d~~v~Gi~V~~Pl~ 77 (269)
.|.-.|..+ ||+ +.-++++..+. .+|+.++++..-- ..-||+.
T Consensus 160 GKl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fG--p~~~I~~----- 232 (555)
T 1gq2_A 160 GKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYG--MNCLIQF----- 232 (555)
T ss_dssp HHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHC--TTCEEEE-----
T ss_pred hHHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhC--CCcEEee-----
Confidence 677777776 599 88888876322 3455555544321 2346766
Q ss_pred CCCCHHHHHhcCCccc-cccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHH
Q 024306 78 QHLDEGKILDAVSLEK-DVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 156 (269)
Q Consensus 78 ~~~~~~~i~~~i~p~k-dvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L 156 (269)
|.+...+.+..++-.+ ++-. .| ++..+---.+..|++..++-.+.++++.++++.|+|.+ |.+++.+|
T Consensus 233 EDf~~~~af~il~ryr~~ipv---Fn-------DDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaA-g~gia~ll 301 (555)
T 1gq2_A 233 EDFANANAFRLLHKYRNKYCT---FN-------DDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEA-ALGIANLI 301 (555)
T ss_dssp CSCCHHHHHHHHHHHTTTSEE---EE-------TTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHH-HHHHHHHH
T ss_pred cccCCccHHHHHHHHhccCCE---ec-------CccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHH
Confidence 5555544444333322 2222 12 11222112245778899999999999999999999998 99999998
Q ss_pred Hh----CCC-------EEEEEeCC-----------------------CCCHhhhcCC--CCEEEeccCCCCcccCCCcC-
Q 024306 157 QR----HHA-------TVSIVHAL-----------------------TKNPEQITSE--ADIVIAAAGVANLVRGSWLK- 199 (269)
Q Consensus 157 ~~----~ga-------~Vti~~~~-----------------------t~~l~~~~~~--aDiVIsAtg~p~~i~~~~~~- 199 (269)
.. +|. ++++|+++ ..+|.+.++. +|++|-..+.|+.+++++++
T Consensus 302 ~~~~~~~G~~~eeA~~~i~~~D~~Gli~~~r~~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~ 381 (555)
T 1gq2_A 302 VMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQD 381 (555)
T ss_dssp HHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHH
T ss_pred HHHHHHcCCChHHHhCcEEEEECCCeeeCCCCCchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHH
Confidence 87 673 59999654 1257788884 99999888888899999875
Q ss_pred -----CCcEEEEeeecCC
Q 024306 200 -----PGAVVLDVGTCPV 212 (269)
Q Consensus 200 -----~g~vViDv~~~~~ 212 (269)
+.-+|+=++ ||.
T Consensus 382 Ma~~~~~PIIFaLS-NPt 398 (555)
T 1gq2_A 382 MAAFNKRPIIFALS-NPT 398 (555)
T ss_dssp HHHHCSSCEEEECC-SSG
T ss_pred HHhcCCCCEEEECC-CCC
Confidence 566787777 553
No 159
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=96.80 E-value=0.0021 Score=57.37 Aligned_cols=58 Identities=9% Similarity=0.056 Sum_probs=46.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------CHhhhcC--CCCEEEec
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------NPEQITS--EADIVIAA 186 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------------~l~~~~~--~aDiVIsA 186 (269)
.++++++|+|.|++|.+|+.++..|+++|++|+++.|... ++.+.++ ..|+||+.
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 95 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHS 95 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEEC
Confidence 4578999999999888999999999999999999877421 1234555 78999988
Q ss_pred cCC
Q 024306 187 AGV 189 (269)
Q Consensus 187 tg~ 189 (269)
.|.
T Consensus 96 A~~ 98 (330)
T 2pzm_A 96 AAA 98 (330)
T ss_dssp CCC
T ss_pred Ccc
Confidence 874
No 160
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=96.80 E-value=0.0024 Score=55.12 Aligned_cols=38 Identities=21% Similarity=0.237 Sum_probs=34.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++||+++|.|+++-+|++++..|+++|++|.++.|+.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 41 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKP 41 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 57899999999988889999999999999999987763
No 161
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=96.79 E-value=0.0026 Score=54.85 Aligned_cols=60 Identities=25% Similarity=0.294 Sum_probs=45.3
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------CCHhh---hcCCCCEEEeccCC
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQ---ITSEADIVIAAAGV 189 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------~~l~~---~~~~aDiVIsAtg~ 189 (269)
...+++||+++|.|+++-+|++++..|+++|++|.++.|+. .++.+ .+...|+||+..|.
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~ 91 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG 91 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCC
Confidence 34568999999999988889999999999999999987752 12222 23367899988774
No 162
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=96.79 E-value=0.0026 Score=54.69 Aligned_cols=39 Identities=23% Similarity=0.268 Sum_probs=35.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.+++||+++|.|+++-+|+.+++.|+++|++|+++.|+.
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~ 46 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPN 46 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 357899999999999999999999999999999987764
No 163
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=96.78 E-value=0.0018 Score=63.11 Aligned_cols=92 Identities=8% Similarity=0.116 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHh----CCC-------EEEEEeCC------------------
Q 024306 119 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHAL------------------ 169 (269)
Q Consensus 119 t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~----~ga-------~Vti~~~~------------------ 169 (269)
+..|++..++-.+.++++.++++.|+|.+ |.+++.+|.. .|. .+++|+++
T Consensus 303 ~lAgllnAlki~gk~l~d~riv~~GAGaA-gigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~Gli~~~r~~l~~~k~~~A 381 (605)
T 1o0s_A 303 IVAGLLTCTRVTKKLVSQEKYLFFGAGAA-STGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFA 381 (605)
T ss_dssp HHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTC
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhhhhCeEEEEECCCceeCCCCCchHHHHHHH
Confidence 45788999999999999999999999998 9999999887 784 49999654
Q ss_pred -----CCCHhhhcCC--CCEEEeccCCCCcccCCCcC------CCcEEEEeeecCC
Q 024306 170 -----TKNPEQITSE--ADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV 212 (269)
Q Consensus 170 -----t~~l~~~~~~--aDiVIsAtg~p~~i~~~~~~------~g~vViDv~~~~~ 212 (269)
..+|.+.++. +|++|-..+.|+.+++++++ +.-+|+=++ ||.
T Consensus 382 ~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NPt 436 (605)
T 1o0s_A 382 KDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALS-NPT 436 (605)
T ss_dssp BSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECC-SSG
T ss_pred hhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 1257788884 99999988888899999875 466787777 553
No 164
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.77 E-value=0.0011 Score=60.21 Aligned_cols=74 Identities=11% Similarity=0.186 Sum_probs=54.8
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------------------------CCHhhh
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------------KNPEQI 176 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------------------------------~~l~~~ 176 (269)
-++|.|||+|.+ |.++|..|++.|.+|++++++. .++.+.
T Consensus 6 ~~kI~vIGaG~M-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 6 AGDVLIVGSGLV-GRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHH-HHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CceEEEEeeCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 368999999886 9999999999999999997542 234567
Q ss_pred cCCCCEEEeccCCC-C----ccc--CCCcCCCcEEEEeeec
Q 024306 177 TSEADIVIAAAGVA-N----LVR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 177 ~~~aDiVIsAtg~p-~----~i~--~~~~~~g~vViDv~~~ 210 (269)
+++||+||.+++.. . ++. ...++++++|++....
T Consensus 85 v~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~ 125 (319)
T 2dpo_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred HhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 88999999999842 1 111 1246778888776543
No 165
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.77 E-value=0.0013 Score=51.51 Aligned_cols=54 Identities=15% Similarity=0.060 Sum_probs=41.5
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------C---Hhh-hcCCCCEEEeccCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------N---PEQ-ITSEADIVIAAAGV 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------------~---l~~-~~~~aDiVIsAtg~ 189 (269)
+.++++|+|+|.. |+.++..|.++|.+|+++.+... + +.+ .+.++|+||.+++.
T Consensus 5 ~~~~v~I~G~G~i-G~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 5 GRYEYIVIGSEAA-GVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp -CCSEEEECCSHH-HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred CCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence 4578999999885 99999999999999999976521 1 111 24678999998884
No 166
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=96.76 E-value=0.001 Score=58.53 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=35.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|+||.++|-|+++-+|+++++.|+++||+|.++.++
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~ 42 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIR 42 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 58999999999998888999999999999999999765
No 167
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.76 E-value=0.00074 Score=59.01 Aligned_cols=35 Identities=11% Similarity=0.274 Sum_probs=31.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~ 169 (269)
+++++|+|+|+||. |.++++.|+..|. +++++++.
T Consensus 29 l~~~~VlVvG~Gg~-G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 29 LKDSRVLIVGLGGL-GCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HHHCEEEEECCSHH-HHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCeEEEEeeCHH-HHHHHHHHHHcCCCeEEEEcCC
Confidence 56899999999997 9999999999997 79998654
No 168
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.75 E-value=0.0017 Score=54.90 Aligned_cols=56 Identities=11% Similarity=-0.004 Sum_probs=45.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhC--CCEEEEEeCCC--------------------CCHhhhcCCCCEEEeccCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALT--------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~--ga~Vti~~~~t--------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
.++++|+|.|++|.+|+.++..|.++ |++|+++.|+. .++.+.+++.|+||+.+|.
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 46789999999888999999999999 78999987742 1234567789999988874
No 169
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=96.75 E-value=0.0093 Score=53.73 Aligned_cols=147 Identities=12% Similarity=0.048 Sum_probs=100.7
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccc
Q 024306 22 SQTYVRNKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 99 (269)
Q Consensus 22 s~~y~~~~~~~~~~~Gi~~~~~~~~~~~--~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~ 99 (269)
|-.=--+-..+++++|.++.++.-.... .-|-+.+.++-|+.- +|+|.+-.|-. ..++.+.... .+-
T Consensus 56 STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~~------~~~~~la~~~---~vP 124 (301)
T 2ef0_A 56 SLRTRTTLEVAMVHLGGHAVYLDQKQVGIGEREPVRDVAKNLERF--VEGIAARVFRH------ETVEALARHA---KVP 124 (301)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEGGGSCTTTCCCHHHHHHHHTTT--CSEEEEECSSH------HHHHHHHHHC---SSC
T ss_pred CcchHHHHHHHHHHcCCeEEEECCcccccCCCCchHHHHHHHHHh--CCEEEEecCCh------HHHHHHHHHC---CCC
Confidence 3333334667999999999988743211 134578888888774 78999987732 2222221111 233
Q ss_pred cceecccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------
Q 024306 100 PLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------- 170 (269)
Q Consensus 100 ~~n~g~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------- 170 (269)
.+|.| .+.+.||=+.+ ++.+.++. ..++|.+|+++|-++-|++.++..|...|++|+++....
T Consensus 125 VINa~-------~~~~HPtQaLaDl~Ti~e~~-g~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~ 196 (301)
T 2ef0_A 125 VVNAL-------SDRAHPLQALADLLTLKEVF-GGLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLL 196 (301)
T ss_dssp EEEEE-------CSSCCHHHHHHHHHHHHHHH-SCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHH
T ss_pred EEeCC-------CCccCchHHHHHHHHHHHHh-CCcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHH
Confidence 45643 23456888777 44555554 479999999999988889999999999999999996542
Q ss_pred --------CCHhhhcCCCCEEEecc
Q 024306 171 --------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 171 --------~~l~~~~~~aDiVIsAt 187 (269)
.++.+.+++||+|.+-.
T Consensus 197 ~~~~~~~~~d~~eav~~aDvvy~~~ 221 (301)
T 2ef0_A 197 KRANAFFTHDPKEAALGAHALYTDV 221 (301)
T ss_dssp HHHTCEEESCHHHHHTTCSEEEECC
T ss_pred hhceeEEECCHHHHhcCCCEEEecC
Confidence 45678899999999743
No 170
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=96.75 E-value=0.00091 Score=58.16 Aligned_cols=55 Identities=13% Similarity=0.143 Sum_probs=45.9
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------CHhhhcCCCCEEEeccCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------------~l~~~~~~aDiVIsAtg~ 189 (269)
++|+|+|.|++|-+|+.++..|+++|++|+++.|... ++.+.+++.|+||+..|.
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~ 74 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGGI 74 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC
Confidence 5789999999888899999999999999999877531 234667889999988874
No 171
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=96.75 E-value=0.0018 Score=56.03 Aligned_cols=69 Identities=14% Similarity=0.140 Sum_probs=51.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------CCHhhhcCCCCEEEeccCCCCc---ccCCCc
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQITSEADIVIAAAGVANL---VRGSWL 198 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------~~l~~~~~~aDiVIsAtg~p~~---i~~~~~ 198 (269)
.+|.|||.|.+ |++++..|.+.|..|++++++. .++.+.++++|+||.+++ |.. +-. .+
T Consensus 4 m~i~iiG~G~m-G~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~v~~-~l 80 (259)
T 2ahr_A 4 MKIGIIGVGKM-ASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFETVLK-PL 80 (259)
T ss_dssp CEEEEECCSHH-HHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHHHHT-TS
T ss_pred cEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHHHHH-Hh
Confidence 47999999886 9999999999998899998752 245566789999999998 331 111 13
Q ss_pred CCCcEEEEee
Q 024306 199 KPGAVVLDVG 208 (269)
Q Consensus 199 ~~g~vViDv~ 208 (269)
+++.+++|+.
T Consensus 81 ~~~~~vv~~~ 90 (259)
T 2ahr_A 81 HFKQPIISMA 90 (259)
T ss_dssp CCCSCEEECC
T ss_pred ccCCEEEEeC
Confidence 4666777763
No 172
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=96.74 E-value=0.0015 Score=57.42 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=34.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+|+||.++|-|++.-+|+++|+.|+++|++|.++.++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 36899999999998888999999999999999999876
No 173
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.74 E-value=0.0083 Score=54.83 Aligned_cols=142 Identities=12% Similarity=0.049 Sum_probs=97.7
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~--~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..++.++|.++.++.-.... .-|-+.+.++-|+.- +|+|.+--|-. ..+..+.. -. ++-.+|.|
T Consensus 61 SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~--~D~IviR~~~~------~~~~~lA~--~~-~vPVINa~- 128 (333)
T 1duv_G 61 SFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRM--YDGIQYRGYGQ------EIVETLAE--YA-SVPVWNGL- 128 (333)
T ss_dssp HHHHHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHTTT--CSEEEEECSCH------HHHHHHHH--HH-SSCEEESC-
T ss_pred HHHHHHHHcCCeEEEECCccccCcCCCcHHHHHHHHHHh--CCEEEEEcCCc------hHHHHHHH--hC-CCCeEcCC-
Confidence 3567899999999988532210 134588888888774 78999987732 22222211 11 23345632
Q ss_pred cccCCCCCccccCCHHH-HHHHHHH-hCCCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC-------------
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIR-SGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL------------- 169 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~-~~~~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~------------- 169 (269)
++.+.||=+.+ ++.+.++ .+..++|.+++++|-+ ..|++.++..++..|++|+++...
T Consensus 129 ------~~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~ 202 (333)
T 1duv_G 129 ------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECR 202 (333)
T ss_dssp ------CSSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHH
T ss_pred ------CCCCCchHHHHHHHHHHHHhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHH
Confidence 34567998888 4555555 4547999999999997 567999999999999999999543
Q ss_pred ------------CCCHhhhcCCCCEEEecc
Q 024306 170 ------------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 ------------t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+.+++||+|.+-+
T Consensus 203 ~~a~~~G~~v~~~~d~~eav~~aDvvytd~ 232 (333)
T 1duv_G 203 ALAQQNGGNITLTEDVAKGVEGADFIYTDV 232 (333)
T ss_dssp HHHHHTTCEEEEESCHHHHHTTCSEEEECC
T ss_pred HHHHHcCCeEEEEECHHHHhCCCCEEEeCC
Confidence 235667899999999733
No 174
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.74 E-value=0.00099 Score=54.64 Aligned_cols=58 Identities=16% Similarity=0.130 Sum_probs=45.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhC-CCEEEEEeCCCC------------------C---Hhhh--cCCCCEEEecc
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTK------------------N---PEQI--TSEADIVIAAA 187 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~-ga~Vti~~~~t~------------------~---l~~~--~~~aDiVIsAt 187 (269)
.++.+++++|+|.|.+ |+.++..|.+. |.+|+++.++.. + +.+. +.++|+||.++
T Consensus 35 ~~~~~~~v~IiG~G~~-G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 35 INPGHAQVLILGMGRI-GTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp BCCTTCSEEEECCSHH-HHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred cCCCCCcEEEECCCHH-HHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 4567889999999876 99999999999 999999976520 1 2333 67889999988
Q ss_pred CCC
Q 024306 188 GVA 190 (269)
Q Consensus 188 g~p 190 (269)
+.+
T Consensus 114 ~~~ 116 (183)
T 3c85_A 114 PHH 116 (183)
T ss_dssp SSH
T ss_pred CCh
Confidence 853
No 175
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.74 E-value=0.014 Score=52.84 Aligned_cols=141 Identities=13% Similarity=0.154 Sum_probs=97.9
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~--~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..++.++|.++.++.-.... .-|-+.+.++-|+.- +|+|.+-.|-. ..++.+.... .+-.+|.|
T Consensus 63 SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~~------~~~~~lA~~~---~vPVINa~- 130 (315)
T 1pvv_A 63 SFEVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRY--VDAIMARVYDH------KDVEDLAKYA---TVPVINGL- 130 (315)
T ss_dssp HHHHHHHHTTSEEEEEEGGGSTTTTTCCHHHHHHHHTTT--CSEEEEECSSH------HHHHHHHHHC---SSCEEEEE-
T ss_pred HHHHHHHHcCCeEEEECCccccCCCCcCHHHHHHHHHHh--CcEEEEecCch------HHHHHHHHhC---CCCEEcCC-
Confidence 3567899999999988743210 134677888888774 78999987732 2222221111 23345642
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC---------------
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL--------------- 169 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~--------------- 169 (269)
++.+.||=+.+ ++.+.++. ..++|.+|+++|-++-|++.++..+...|++|+++...
T Consensus 131 ------~~~~HPtQaLaDl~Ti~e~~-g~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~ 203 (315)
T 1pvv_A 131 ------SDFSHPCQALADYMTIWEKK-GTIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQN 203 (315)
T ss_dssp ------CSSCCHHHHHHHHHHHHHHH-SCCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHH
T ss_pred ------CCCCCcHHHHHHHHHHHHHh-CCcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHH
Confidence 23456888887 45555555 47999999999998888999999999999999999643
Q ss_pred ----------CCCHhhhcCCCCEEEecc
Q 024306 170 ----------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 ----------t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+.+++||+|.+-+
T Consensus 204 a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 204 AAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp HHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred HHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 234567899999999743
No 176
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.74 E-value=0.0012 Score=56.19 Aligned_cols=57 Identities=16% Similarity=0.132 Sum_probs=45.8
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCCC---------------------CHhhhcCCCCEEEeccCCCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK---------------------NPEQITSEADIVIAAAGVAN 191 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~p~ 191 (269)
..|+|+|.|++|-+|+.++..|+++| ++|+++.|... ++.+.++.+|+||++.|.+.
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 45889999988888999999999999 89999877521 23456788999998777543
No 177
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.74 E-value=0.0018 Score=57.87 Aligned_cols=68 Identities=15% Similarity=0.171 Sum_probs=53.2
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeC--CC-------------------------C--CHhhhcCCCCEEEeccC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHA--LT-------------------------K--NPEQITSEADIVIAAAG 188 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~--~t-------------------------~--~l~~~~~~aDiVIsAtg 188 (269)
+|.|||+|.+ |.+++..|.+.|.+|+++++ +. . ++.+.++++|+||.+++
T Consensus 2 ~I~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 2 IVSILGAGAM-GSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp EEEEESCCHH-HHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred EEEEECcCHH-HHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 6899999886 99999999999999999988 41 0 23345778999999998
Q ss_pred CCCc------ccCCCcCCCcEEEEee
Q 024306 189 VANL------VRGSWLKPGAVVLDVG 208 (269)
Q Consensus 189 ~p~~------i~~~~~~~g~vViDv~ 208 (269)
.+.. +.+ ++++++|+|+.
T Consensus 81 ~~~~~~v~~~i~~--l~~~~~vv~~~ 104 (335)
T 1txg_A 81 TDGVLPVMSRILP--YLKDQYIVLIS 104 (335)
T ss_dssp GGGHHHHHHHHTT--TCCSCEEEECC
T ss_pred hHHHHHHHHHHhc--CCCCCEEEEEc
Confidence 6431 233 77889999984
No 178
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.72 E-value=0.0012 Score=59.86 Aligned_cols=94 Identities=19% Similarity=0.143 Sum_probs=59.1
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------CHh----
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------NPE---- 174 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------------~l~---- 174 (269)
|+....+...+.+...--.|++|+|+|++|.+|..+++++...|++|+++.++.. ++.
T Consensus 141 ~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~ 220 (342)
T 4eye_A 141 IANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVR 220 (342)
T ss_dssp TTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHH
T ss_pred hhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHH
Confidence 3333334455533333347999999999555699999999999999888766421 111
Q ss_pred hhc--CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeec
Q 024306 175 QIT--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 175 ~~~--~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
+.. +..|+||+++|.+.+ -.-+.++++-.++.+|..
T Consensus 221 ~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~~ 259 (342)
T 4eye_A 221 EATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFA 259 (342)
T ss_dssp HHTTTSCEEEEEESCC--CHHHHHHTEEEEEEEEEC---
T ss_pred HHhCCCCceEEEECCchhHHHHHHHhhcCCCEEEEEEcc
Confidence 112 258999999997643 223467777777788754
No 179
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=96.71 E-value=0.0028 Score=57.17 Aligned_cols=36 Identities=19% Similarity=0.369 Sum_probs=33.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHh--CCCEEEEEeC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQR--HHATVSIVHA 168 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~--~ga~Vti~~~ 168 (269)
++++++|+|.|++|.+|+.++..|++ +|++|+++.|
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 57899999999999999999999999 8999999876
No 180
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=96.71 E-value=0.0031 Score=55.04 Aligned_cols=39 Identities=31% Similarity=0.377 Sum_probs=35.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|+.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 45 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPE 45 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 468899999999988889999999999999999998764
No 181
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=96.70 E-value=0.0019 Score=61.10 Aligned_cols=80 Identities=23% Similarity=0.306 Sum_probs=56.4
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------------------CCHhhhc
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------KNPEQIT 177 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------------------------~~l~~~~ 177 (269)
.+...+-.+|.|||.|.+ |.++|..|++ |.+|+++++.. .++.+.+
T Consensus 30 ~~r~~~~mkIaVIGlG~m-G~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~ 107 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYV-GLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAY 107 (432)
T ss_dssp -----CCCEEEEECCSHH-HHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHH
T ss_pred cccccCCCEEEEECcCHH-HHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHH
Confidence 334445568999999886 9999999987 99999997541 2345678
Q ss_pred CCCCEEEeccCCCC----------ccc------CCCcCCCcEEEEeeecCC
Q 024306 178 SEADIVIAAAGVAN----------LVR------GSWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 178 ~~aDiVIsAtg~p~----------~i~------~~~~~~g~vViDv~~~~~ 212 (269)
++||+||.+++.|. .+. .. ++++++|||...-+.
T Consensus 108 ~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~p 157 (432)
T 3pid_A 108 RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPV 157 (432)
T ss_dssp TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCT
T ss_pred hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCCh
Confidence 89999999998651 010 12 688999999876543
No 182
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.70 E-value=0.011 Score=53.32 Aligned_cols=149 Identities=14% Similarity=0.084 Sum_probs=99.9
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCcccccccc
Q 024306 22 SQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 98 (269)
Q Consensus 22 s~~y~~~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~ 98 (269)
|-.=--+-..++.++|.++.++.-.... .-|-+.+.++-|+.- +|+|.+-.|-.. ....+.+.. .+
T Consensus 49 STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~--~D~iviR~~~~~--~~~~la~~~-------~v 117 (299)
T 1pg5_A 49 STRTYLSFQKAIINLGGDVIGFSGEESTSVAKGENLADTIRMLNNY--SDGIVMRHKYDG--ASRFASEIS-------DI 117 (299)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECC-------CCCHHHHHHHHHHH--CSEEEEEESSBT--HHHHHHHHC-------SS
T ss_pred CcchHHhHHHHHHHhCCEEEEeCCCCcccccCCCCHHHHHHHHHHh--CCEEEEeCCChh--HHHHHHHhC-------CC
Confidence 4433445667999999999888643211 124567777777763 689999887443 223333221 13
Q ss_pred ccceecccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhC-CCEEEEEeCC-----
Q 024306 99 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL----- 169 (269)
Q Consensus 99 ~~~n~g~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~g--g~vg~~~a~~L~~~-ga~Vti~~~~----- 169 (269)
-.+|.|. .+.+.||=+.+ ++.+.++. ..++|.+|+++|-+ +-|++.++..+... |++|+++...
T Consensus 118 PVINaG~------g~~~HPtQ~LaDl~Ti~e~~-g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~ 190 (299)
T 1pg5_A 118 PVINAGD------GKHEHPTQAVIDIYTINKHF-NTIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRAR 190 (299)
T ss_dssp CEEEEEE------TTTBCHHHHHHHHHHHHHHH-SCSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCC
T ss_pred CEEeCCC------CCCcCcHHHHHHHHHHHHHh-CCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCC
Confidence 3455422 34566998888 45555554 47999999999986 45799999999999 9999999543
Q ss_pred -------------CCCHhhhcCCCCEEEeccC
Q 024306 170 -------------TKNPEQITSEADIVIAAAG 188 (269)
Q Consensus 170 -------------t~~l~~~~~~aDiVIsAtg 188 (269)
+.++.+.+++||+|.+-.-
T Consensus 191 ~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 222 (299)
T 1pg5_A 191 KEILDELNYPVKEVENPFEVINEVDVLYVTRI 222 (299)
T ss_dssp HHHHTTCCSCEEEESCGGGTGGGCSEEEEECC
T ss_pred HHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCc
Confidence 1356788999999996653
No 183
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=96.69 E-value=0.0021 Score=56.26 Aligned_cols=60 Identities=30% Similarity=0.289 Sum_probs=46.0
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------C------Hh-------hhcCCCCEEEe
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------N------PE-------QITSEADIVIA 185 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------~------l~-------~~~~~aDiVIs 185 (269)
...+++||+++|.|+++-+|+++++.|+++|++|.++.+... | +. +....-|++|+
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~ 87 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVN 87 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 345789999999999888899999999999999999876531 1 11 12236799998
Q ss_pred ccCC
Q 024306 186 AAGV 189 (269)
Q Consensus 186 Atg~ 189 (269)
..|.
T Consensus 88 nAg~ 91 (269)
T 3vtz_A 88 NAGI 91 (269)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 8884
No 184
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=96.69 E-value=0.01 Score=53.55 Aligned_cols=141 Identities=13% Similarity=0.037 Sum_probs=97.9
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|.++.++.-. +. .-|-+.+.++-|+.- +|+|.+-.|-. ..+..+.... .+-.+|.|
T Consensus 53 SFe~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvls~~--~D~iviR~~~~------~~~~~lA~~~---~vPVINag 120 (307)
T 3tpf_A 53 AFELAITELGGKALFLSSN-DLQLSRGEPVKDTARVIGAM--VDFVMMRVNKH------ETLLEFARYS---KAPVINAL 120 (307)
T ss_dssp HHHHHHHHTTCEEEEECTT-TCCTTTSSCHHHHHHHHHHH--SSEEEEECSCH------HHHHHHHHHC---SSCEEEEE
T ss_pred hHHHHHHHcCCeEEEcCcc-cccCCCCCCHHHHHHHHHHh--CCEEEEecCCh------HHHHHHHHhC---CCCEEeCC
Confidence 4567899999999887532 11 134577777777773 78999987732 2222221111 23345653
Q ss_pred ccccCCCCCccccCCHHHHHHHHHHhCCCCc-cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------
Q 024306 105 NLAMRGREPLFIPCTPKGCIELLIRSGVEIM-GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------- 170 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~-gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------- 170 (269)
. +.+.||=+.+=+--++++...++ |++|+++|-++.|++.++..+...|++|+++....
T Consensus 121 ~-------~~~HPtQaLaDl~Ti~e~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~ 193 (307)
T 3tpf_A 121 S-------ELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMK 193 (307)
T ss_dssp C-------SSCCHHHHHHHHHHHHHTTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHH
T ss_pred C-------CCcCcHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHH
Confidence 2 24568877774444455555799 99999999999899999999999999999996532
Q ss_pred ------------CCHhhhcCCCCEEEecc
Q 024306 171 ------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 171 ------------~~l~~~~~~aDiVIsAt 187 (269)
.++.+.+++||+|.+-+
T Consensus 194 ~a~~~g~~~~~~~d~~eav~~aDvvyt~~ 222 (307)
T 3tpf_A 194 QALISGAKISLGYDKFEALKDKDVVITDT 222 (307)
T ss_dssp HHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred HHHHcCCeEEEEcCHHHHhcCCCEEEecC
Confidence 35567889999999766
No 185
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.69 E-value=0.0015 Score=57.96 Aligned_cols=88 Identities=13% Similarity=0.114 Sum_probs=58.0
Q ss_pred HHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC--------------------HhhhcCCC
Q 024306 121 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------------------PEQITSEA 180 (269)
Q Consensus 121 ~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~--------------------l~~~~~~a 180 (269)
..++..+.+.. --.|++|+|+|++|.+|..+++.+...|++|+.+.++... +.+.++.+
T Consensus 112 ~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~ 190 (302)
T 1iz0_A 112 LTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGL 190 (302)
T ss_dssp HHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSE
T ss_pred HHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCc
Confidence 33455565555 4479999999996667999999999999998888764211 11223568
Q ss_pred CEEEeccCCCCc-ccCCCcCCCcEEEEeeec
Q 024306 181 DIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 181 DiVIsAtg~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
|+||+ +|.+.+ -.-+.++++-.++.++..
T Consensus 191 d~vid-~g~~~~~~~~~~l~~~G~~v~~g~~ 220 (302)
T 1iz0_A 191 DLVLE-VRGKEVEESLGLLAHGGRLVYIGAA 220 (302)
T ss_dssp EEEEE-CSCTTHHHHHTTEEEEEEEEEC---
T ss_pred eEEEE-CCHHHHHHHHHhhccCCEEEEEeCC
Confidence 99999 887432 123456776677777754
No 186
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=96.69 E-value=0.0024 Score=54.43 Aligned_cols=37 Identities=30% Similarity=0.452 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.+++.|+++|++|.++.|.
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCC
Confidence 4689999999998889999999999999999999876
No 187
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.68 E-value=0.0018 Score=54.11 Aligned_cols=52 Identities=21% Similarity=0.192 Sum_probs=42.8
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------CHh----hhcCCCCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPE----QITSEADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------~l~----~~~~~aDiVIsAtg~ 189 (269)
+|+|.|++|.+|+.++..|+++|++|+++.|... |+. +.+...|+||++.|.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 6999999888899999999999999999987621 111 457789999998885
No 188
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.68 E-value=0.0018 Score=57.11 Aligned_cols=54 Identities=15% Similarity=0.129 Sum_probs=45.1
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------CHhhhcCCCCEEEeccCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------~l~~~~~~aDiVIsAtg~ 189 (269)
+++|+|.|++|.+|+.++..|.++|.+|+++.|... ++.+.++++|+||...+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCCHHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEccccHHHHHHhhcCCCEEEEcccc
Confidence 478999999999999999999999999999987622 134567889999988774
No 189
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=96.68 E-value=0.003 Score=59.76 Aligned_cols=77 Identities=26% Similarity=0.341 Sum_probs=54.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------CCHhh---------------hcCCCCEE
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQ---------------ITSEADIV 183 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------~~l~~---------------~~~~aDiV 183 (269)
-.|.+..|||.|.+ |.|+|..|++.|.+|++++++. +.+.+ -+++||+|
T Consensus 9 ~~~~~~~ViGlGyv-Glp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvv 87 (431)
T 3ojo_A 9 HHGSKLTVVGLGYI-GLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVF 87 (431)
T ss_dssp ---CEEEEECCSTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEE
T ss_pred ccCCccEEEeeCHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEE
Confidence 36889999999886 9999999999999999997762 11211 14579999
Q ss_pred EeccCCCCccc-----------------CCCcCCCcEEEEeeecC
Q 024306 184 IAAAGVANLVR-----------------GSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 184 IsAtg~p~~i~-----------------~~~~~~g~vViDv~~~~ 211 (269)
|.++|.|.-.+ ...+++|++|||...-+
T Consensus 88 ii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~ 132 (431)
T 3ojo_A 88 IIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIA 132 (431)
T ss_dssp EECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCC
T ss_pred EEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCC
Confidence 99999764111 12367888888877544
No 190
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.68 E-value=0.0016 Score=58.34 Aligned_cols=92 Identities=18% Similarity=0.144 Sum_probs=61.3
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC------------------CCC-Hhhhc
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL------------------TKN-PEQIT 177 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~------------------t~~-l~~~~ 177 (269)
|+....++..++..+ --.|.+|+|+|++|.+|..+++++...|++|+.+.+. ..+ +.+.+
T Consensus 135 ~~~~~ta~~al~~~~-~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~ 213 (321)
T 3tqh_A 135 PTAGLTALQALNQAE-VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAIS 213 (321)
T ss_dssp HHHHHHHHHHHHHTT-CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCC
T ss_pred hhHHHHHHHHHHhcC-CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhc
Confidence 333333455554333 3479999999855556999999999999987765332 234 55666
Q ss_pred CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeee
Q 024306 178 SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 178 ~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~ 209 (269)
+.+|+||.++|.+.. -.-+.++++-.++.++.
T Consensus 214 ~g~D~v~d~~g~~~~~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 214 TPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp SCEEEEEESSCHHHHHHHGGGEEEEEEEEECCS
T ss_pred cCCCEEEECCCcHHHHHHHHhccCCCEEEEeCC
Confidence 788999999996543 22345677766766664
No 191
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.67 E-value=0.0021 Score=61.66 Aligned_cols=75 Identities=16% Similarity=0.266 Sum_probs=56.6
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhcC---CCCEEEeccCCCCc-
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQITS---EADIVIAAAGVANL- 192 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~~~---~aDiVIsAtg~p~~- 192 (269)
-++|.|||.|.+ |.+++..|++.|.+|++.+++. .++.+.++ ++|+||.+++.+..
T Consensus 4 ~~kIgiIGlG~M-G~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 82 (484)
T 4gwg_A 4 QADIALIGLAVM-GQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAV 82 (484)
T ss_dssp CBSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHH
T ss_pred CCEEEEEChhHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHH
Confidence 357999999887 9999999999999999998763 23344443 59999999987521
Q ss_pred ---cc--CCCcCCCcEEEEeeecC
Q 024306 193 ---VR--GSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 193 ---i~--~~~~~~g~vViDv~~~~ 211 (269)
+. ...+++|.+|||++...
T Consensus 83 ~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 83 DDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp HHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCC
Confidence 21 23567899999988543
No 192
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.65 E-value=0.0015 Score=58.57 Aligned_cols=91 Identities=13% Similarity=0.083 Sum_probs=60.9
Q ss_pred HHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhh----hc
Q 024306 121 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQ----IT 177 (269)
Q Consensus 121 ~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~----~~ 177 (269)
..+...+.+..---.|++|+|+|++|.+|..+++++...|++|+++.++. .++.+ .+
T Consensus 126 ~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 126 LTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp HHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHh
Confidence 33444444333334699999999656679999999999999988876541 12222 22
Q ss_pred --CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeecC
Q 024306 178 --SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 178 --~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~~ 211 (269)
+..|+||+++|.+.+ -.-+.++++-.++.++...
T Consensus 206 ~~~g~Dvvid~~g~~~~~~~~~~l~~~G~iv~~g~~~ 242 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNAS 242 (325)
T ss_dssp TTCCEEEEEESSCGGGHHHHHTTEEEEEEEEECCCTT
T ss_pred CCCCceEEEECCChHHHHHHHHHhcCCCEEEEEecCC
Confidence 258999999997433 2335678888888888653
No 193
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.65 E-value=0.0026 Score=60.38 Aligned_cols=73 Identities=21% Similarity=0.234 Sum_probs=55.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------------CCHhhhcCCCCE
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADI 182 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------------------------~~l~~~~~~aDi 182 (269)
-++.|||.|-+ |.++|..|++.|.+|++++++. .++.+.+++||+
T Consensus 9 ~~~~vIGlG~v-G~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 9 VRIAMIGTGYV-GLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred eEEEEEcCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 47999999886 9999999999999999997652 234467789999
Q ss_pred EEeccCCCC----------ccc------CCCcCCCcEEEEeeec
Q 024306 183 VIAAAGVAN----------LVR------GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 183 VIsAtg~p~----------~i~------~~~~~~g~vViDv~~~ 210 (269)
||.++|.|. ++. ...++++++||+...-
T Consensus 88 vii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv 131 (446)
T 4a7p_A 88 VFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTV 131 (446)
T ss_dssp EEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCC
T ss_pred EEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 999988662 111 1246788888887643
No 194
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.64 E-value=0.0038 Score=57.27 Aligned_cols=92 Identities=16% Similarity=0.096 Sum_probs=62.4
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC--------------------Hhhh
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------------------PEQI 176 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~--------------------l~~~ 176 (269)
||....++..+++.++ -.|.+|+|+|+|+ +|..+++++..+|++|+.+.++... ..+.
T Consensus 177 ~~~~~tA~~al~~~~~-~~g~~VlV~GaG~-vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~ 254 (369)
T 1uuf_A 177 LCAGITTYSPLRHWQA-GPGKKVGVVGIGG-LGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAH 254 (369)
T ss_dssp GTHHHHHHHHHHHTTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTT
T ss_pred hhhHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHh
Confidence 3433334566665433 3689999999976 5999999999999998877654211 1122
Q ss_pred cCCCCEEEeccCCCCcc--cCCCcCCCcEEEEeeec
Q 024306 177 TSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 177 ~~~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
...+|+||+++|.+..+ .-+.++++-.++.++..
T Consensus 255 ~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 255 LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp TTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC
T ss_pred hcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccC
Confidence 24689999999976533 23567777777777754
No 195
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.63 E-value=0.0024 Score=49.21 Aligned_cols=54 Identities=19% Similarity=0.286 Sum_probs=40.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------C---Hh-hhcCCCCEEEeccCCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------N---PE-QITSEADIVIAAAGVA 190 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------------~---l~-~~~~~aDiVIsAtg~p 190 (269)
+++++|+|+|.. |+.++..|.+.|.+|+++.++.. + +. ..+.++|+||.+++.+
T Consensus 4 ~m~i~IiG~G~i-G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 80 (140)
T 1lss_A 4 GMYIIIAGIGRV-GYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE 80 (140)
T ss_dssp -CEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred CCEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc
Confidence 468999999775 99999999999999999976421 1 11 1256789999998853
No 196
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.62 E-value=0.0023 Score=60.66 Aligned_cols=72 Identities=24% Similarity=0.310 Sum_probs=53.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------------CCHhhhcCCCCE
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADI 182 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------------------------~~l~~~~~~aDi 182 (269)
.+|.|||.|.+ |.++|..|++.|.+|++++++. .++.+.+++||+
T Consensus 3 mkI~VIG~G~v-G~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv 81 (450)
T 3gg2_A 3 LDIAVVGIGYV-GLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI 81 (450)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred CEEEEECcCHH-HHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence 47999999886 9999999999999999997641 134456788999
Q ss_pred EEeccCCCC---------cc---c---CCCcCCCcEEEEeee
Q 024306 183 VIAAAGVAN---------LV---R---GSWLKPGAVVLDVGT 209 (269)
Q Consensus 183 VIsAtg~p~---------~i---~---~~~~~~g~vViDv~~ 209 (269)
||.+++.|. .+ - ...++++++|++...
T Consensus 82 ViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST 123 (450)
T 3gg2_A 82 IFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST 123 (450)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred EEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence 999998762 11 0 113567888887764
No 197
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.62 E-value=0.022 Score=51.44 Aligned_cols=141 Identities=13% Similarity=0.118 Sum_probs=94.8
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~--~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..+++++|.++.++.-.... .-|-+.+.++-|+.- +|+|.+-.|-. ..+..+.... .+-.+|.|
T Consensus 56 SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~~------~~~~~lA~~~---~vPVINa~- 123 (307)
T 2i6u_A 56 SFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRY--VDAIVWRTFGQ------ERLDAMASVA---TVPVINAL- 123 (307)
T ss_dssp HHHHHHHHTTCEEEEEEGGGSGGGGTCCHHHHHHHHHHH--EEEEEEECSSH------HHHHHHHHHC---SSCEEESC-
T ss_pred HHHHHHHHcCCeEEEECCccccCCCCCCHHHHHHHHHHh--CCEEEEecCCh------hHHHHHHhhC---CCCEEcCC-
Confidence 3567899999999988642210 123466666666663 67888887732 2222221111 23345632
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCCC-------------
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHALT------------- 170 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~t------------- 170 (269)
.+.+.||=+.+ ++.+.++. ..++|.+|+++|-+ .-|++.++..+...|++|+++....
T Consensus 124 ------~~~~HPtQaLaDl~Ti~e~~-g~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~ 196 (307)
T 2i6u_A 124 ------SDEFHPCQVLADLQTIAERK-GALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAER 196 (307)
T ss_dssp ------CSSCCHHHHHHHHHHHHHHH-SCCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHH
T ss_pred ------CCCcCccHHHHHHHHHHHHh-CCcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHH
Confidence 24566998887 44555544 47999999999997 6679999999999999999996432
Q ss_pred ------------CCHhhhcCCCCEEEecc
Q 024306 171 ------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 171 ------------~~l~~~~~~aDiVIsAt 187 (269)
.++.+.+++||+|.+-+
T Consensus 197 ~a~~~G~~~~~~~d~~eav~~aDvvy~~~ 225 (307)
T 2i6u_A 197 RAQDTGASVTVTADAHAAAAGADVLVTDT 225 (307)
T ss_dssp HHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred HHHHcCCeEEEEECHHHHhcCCCEEEecc
Confidence 34567899999999743
No 198
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=96.61 E-value=0.023 Score=51.26 Aligned_cols=148 Identities=11% Similarity=0.084 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCcccccccc
Q 024306 22 SQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 98 (269)
Q Consensus 22 s~~y~~~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~ 98 (269)
|-.=--+-..++.++|.++.++.-+.+. .-|-+.+.++-|..- +|+|.+--|-.. ....+.+.. .+
T Consensus 51 STRTR~SFe~A~~~LGg~~i~l~~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~~~--~~~~lA~~~-------~v 119 (306)
T 4ekn_B 51 STRTRLSFETAMKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGY--ADIIVLRHPSEG--AARLASEYS-------QV 119 (306)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCTTTTSSSSCCHHHHHHHHHHH--CSEEEEECSSTT--HHHHHHHHC-------SS
T ss_pred ChhHHhhHHHHHHHcCCEEEEcCCcccccCCCCCCHHHHHHHHHHh--CcEEEEEcCChH--HHHHHHHhC-------CC
Confidence 3333334667899999999887431221 124466666666663 589999888543 223332222 12
Q ss_pred ccceecccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhC-CCEEEEEeCC-----
Q 024306 99 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL----- 169 (269)
Q Consensus 99 ~~~n~g~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~g--g~vg~~~a~~L~~~-ga~Vti~~~~----- 169 (269)
-.+|.| ..+.+.||=+.+ ++.+.++.+ .++|.+|+++|-+ +-|++.++..+... |++|+++...
T Consensus 120 PVINag------~g~~~HPtQ~LaDl~Ti~e~~g-~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~ 192 (306)
T 4ekn_B 120 PIINAG------DGSNQHPTQTLLDLYTIMREIG-RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLP 192 (306)
T ss_dssp CEEESC------SSSSCCHHHHHHHHHHHHHHHS-CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCC
T ss_pred CEEeCC------CCCCcCcHHHHHHHHHHHHHhC-CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccC
Confidence 334532 234566998887 445555554 7999999999986 45699999999999 9999998543
Q ss_pred ----------------CCCHhhhcCCCCEEEecc
Q 024306 170 ----------------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 ----------------t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+.+++||+|++..
T Consensus 193 ~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~ 226 (306)
T 4ekn_B 193 KDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTR 226 (306)
T ss_dssp HHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECC
T ss_pred HHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCC
Confidence 246678899999999764
No 199
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=96.61 E-value=0.002 Score=55.77 Aligned_cols=37 Identities=27% Similarity=0.325 Sum_probs=34.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 41 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADID 41 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999999998765
No 200
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.60 E-value=0.0019 Score=56.53 Aligned_cols=54 Identities=19% Similarity=0.218 Sum_probs=43.3
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------C------------------------CHhhhcCCCCEEE
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------K------------------------NPEQITSEADIVI 184 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------~------------------------~l~~~~~~aDiVI 184 (269)
+++|+|.|++|.+|+.++..|.++|++|+++.|.. . ++.+.++.+|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 57899999988889999999999999999887753 0 1235567789999
Q ss_pred eccCC
Q 024306 185 AAAGV 189 (269)
Q Consensus 185 sAtg~ 189 (269)
++++.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 88774
No 201
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=96.60 E-value=0.0018 Score=56.55 Aligned_cols=58 Identities=26% Similarity=0.276 Sum_probs=45.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------CH-------------hhhcCCCCEEEeccC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------NP-------------EQITSEADIVIAAAG 188 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------~l-------------~~~~~~aDiVIsAtg 188 (269)
.+++||+++|.|+++-+|++++..|+++|++|.++.|... ++ .+....-|++|+..|
T Consensus 24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg 103 (266)
T 3uxy_A 24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAG 103 (266)
T ss_dssp --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 3578999999999888899999999999999999877531 11 112246799999888
Q ss_pred C
Q 024306 189 V 189 (269)
Q Consensus 189 ~ 189 (269)
.
T Consensus 104 ~ 104 (266)
T 3uxy_A 104 V 104 (266)
T ss_dssp C
T ss_pred C
Confidence 4
No 202
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.59 E-value=0.017 Score=52.77 Aligned_cols=147 Identities=12% Similarity=0.064 Sum_probs=98.7
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCcccccccc
Q 024306 22 SQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 98 (269)
Q Consensus 22 s~~y~~~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~ 98 (269)
|-.=--+-..++.++|.++.++.-. +. .-|-+.+.++-|+.- +|+|.+--|-. ..+..+.... ++
T Consensus 56 STRTR~SFE~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvLs~~--~D~IviR~~~~------~~~~~lA~~s---~v 123 (335)
T 1dxh_A 56 STRTRCAFEVAAYDQGANVTYIDPN-SSQIGHKESMKDTARVLGRM--YDAIEYRGFKQ------EIVEELAKFA---GV 123 (335)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTT-TCCBTTTBCHHHHHHHHHHH--CSEEEEECSCH------HHHHHHHHHS---SS
T ss_pred CcchHHHHHHHHHHcCCeEEEECCc-cccCcCCCcHHHHHHHHHhh--CCEEEEecCCh------hHHHHHHHhC---CC
Confidence 3333334567899999999988632 21 134577777777763 68999887732 2222221111 23
Q ss_pred ccceecccccCCCCCccccCCHHHHHHHHHHhCC-CCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC-------
Q 024306 99 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGV-EIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL------- 169 (269)
Q Consensus 99 ~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~-~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~------- 169 (269)
-.+|.| ++.+.||=+.+=+--++++.. .++|.+++++|-+ ..|++.++..+...|++|+++...
T Consensus 124 PVINa~-------~~~~HPtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~ 196 (335)
T 1dxh_A 124 PVFNGL-------TDEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDE 196 (335)
T ss_dssp CEEEEE-------CSSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHH
T ss_pred CEEcCC-------CCCCCcHHHHHHHHHHHHHcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHH
Confidence 345642 245669888884444444444 8999999999997 567999999999999999999543
Q ss_pred ------------------CCCHhhhcCCCCEEEecc
Q 024306 170 ------------------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 ------------------t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+.+++||+|.+-+
T Consensus 197 ~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~ 232 (335)
T 1dxh_A 197 FVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDV 232 (335)
T ss_dssp HHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred HHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCC
Confidence 235667899999999733
No 203
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.0026 Score=61.19 Aligned_cols=73 Identities=21% Similarity=0.247 Sum_probs=55.6
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhcCC---CCEEEeccCCCC--
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSE---ADIVIAAAGVAN-- 191 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~~~~---aDiVIsAtg~p~-- 191 (269)
.++|.|||.|.+ |.+++..|++.|.+|++.+|+. .++.+.+++ +|+||.+++.+.
T Consensus 10 ~~~IgvIGlG~M-G~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 88 (497)
T 2p4q_A 10 SADFGLIGLAVM-GQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPV 88 (497)
T ss_dssp CCSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHH
T ss_pred CCCEEEEeeHHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHH
Confidence 357999999887 9999999999999999998753 134444554 999999998742
Q ss_pred --ccc--CCCcCCCcEEEEeee
Q 024306 192 --LVR--GSWLKPGAVVLDVGT 209 (269)
Q Consensus 192 --~i~--~~~~~~g~vViDv~~ 209 (269)
.+. ...+++|.+|||++.
T Consensus 89 ~~vl~~l~~~l~~g~iIId~s~ 110 (497)
T 2p4q_A 89 DALINQIVPLLEKGDIIIDGGN 110 (497)
T ss_dssp HHHHHHHGGGCCTTCEEEECSC
T ss_pred HHHHHHHHHhCCCCCEEEECCC
Confidence 121 134678999999874
No 204
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=96.58 E-value=0.044 Score=50.10 Aligned_cols=140 Identities=9% Similarity=0.053 Sum_probs=94.0
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|.++.++.-. +. .-|-+.+.++-|+.- +|+|.+--|-. ..+..+.... ++-.+|.|
T Consensus 80 SFE~A~~~LGg~~i~l~~~-~ssl~kgEsl~DTarvLs~~--~D~IviR~~~~------~~~~~lA~~~---~vPVINag 147 (339)
T 4a8t_A 80 SFETAMEQLGGHGEYLAPG-QIQLGGHETIEDTSRVLSRL--VDILMARVERH------HSIVDLANCA---TIPVINGM 147 (339)
T ss_dssp HHHHHHHHTTCEEEEECCC--CCSSSSSCHHHHHHHHHHH--CSEEEEECSSH------HHHHHHHHHC---SSCEEECC
T ss_pred HHHHHHHHcCCeEEEeCcc-cccCCCCcCHHHHHHHHHHh--CCEEEEecCcH------HHHHHHHHhC---CCCEEECC
Confidence 3567899999999987421 11 134466777777663 78998887632 2222221111 23345643
Q ss_pred ccccCCCCCccccCCHHHH-HHHHHHh--CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------
Q 024306 105 NLAMRGREPLFIPCTPKGC-IELLIRS--GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------- 170 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g~-~~~l~~~--~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------- 170 (269)
++.+.||=+.+= +.+.++. +.+++|++|+++|-++.|++.++..+...|++|+++....
T Consensus 148 -------~~~~HPtQaLaDl~Ti~e~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~ 220 (339)
T 4a8t_A 148 -------SDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKL 220 (339)
T ss_dssp -------CSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHH
T ss_pred -------CCCcCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHH
Confidence 244668877774 4444444 3379999999999998899999999999999999996542
Q ss_pred --------------CCHhhhcCCCCEEEecc
Q 024306 171 --------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 171 --------------~~l~~~~~~aDiVIsAt 187 (269)
.++. .+++||+|++-+
T Consensus 221 ~~~a~~~g~~v~~~~d~~-av~~aDvvytd~ 250 (339)
T 4a8t_A 221 AKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 250 (339)
T ss_dssp HHHHHHHCCEEEEECCGG-GGTTCSEEEECC
T ss_pred HHHHHHcCCEEEEECChh-HHcCCCEEEecC
Confidence 2455 789999999743
No 205
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.58 E-value=0.0015 Score=58.72 Aligned_cols=94 Identities=15% Similarity=0.087 Sum_probs=61.9
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------CHhhh
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQI 176 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------------~l~~~ 176 (269)
|+...-++..|.+..---.|++|+|+|++|.+|..+++++...|++|+.+.++.. ++.+.
T Consensus 131 ~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 210 (336)
T 4b7c_A 131 GMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAG 210 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHH
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHH
Confidence 3333445566644433457999999999555699999999999999888865421 11111
Q ss_pred c-----CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeec
Q 024306 177 T-----SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 177 ~-----~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
+ ...|++|+++|.+.+ -.-+.++++-.++.+|..
T Consensus 211 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 211 LKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp HHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCG
T ss_pred HHHhcCCCceEEEECCCcchHHHHHHHHhhCCEEEEEeec
Confidence 1 247888888885322 223467777777777754
No 206
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.58 E-value=0.0088 Score=57.23 Aligned_cols=75 Identities=25% Similarity=0.241 Sum_probs=56.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhC-CC-EEEEEeCCCC----C---H--------------------------------hh
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRH-HA-TVSIVHALTK----N---P--------------------------------EQ 175 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~-ga-~Vti~~~~t~----~---l--------------------------------~~ 175 (269)
++|.|||.|-+ |.++|..|++. |. +|+++++... . + .+
T Consensus 19 mkIaVIGlG~m-G~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~e 97 (478)
T 3g79_A 19 KKIGVLGMGYV-GIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFS 97 (478)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGG
T ss_pred CEEEEECcCHH-HHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHH
Confidence 68999999886 99999999999 99 9999976643 0 0 23
Q ss_pred hcCCCCEEEeccCCCCccc----C-------------CCcCCCcEEEEeeecCC
Q 024306 176 ITSEADIVIAAAGVANLVR----G-------------SWLKPGAVVLDVGTCPV 212 (269)
Q Consensus 176 ~~~~aDiVIsAtg~p~~i~----~-------------~~~~~g~vViDv~~~~~ 212 (269)
.+++||+||.++|.|.-.+ + ..+++|++|||...-+.
T Consensus 98 a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~p 151 (478)
T 3g79_A 98 RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITP 151 (478)
T ss_dssp GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCT
T ss_pred HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCCh
Confidence 4678999999998763111 1 13578999999875554
No 207
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.58 E-value=0.0024 Score=54.36 Aligned_cols=70 Identities=20% Similarity=0.197 Sum_probs=51.6
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEE-EeCCCC---------------CHhhhcCCCCEEEeccCCCC---c---c
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSI-VHALTK---------------NPEQITSEADIVIAAAGVAN---L---V 193 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti-~~~~t~---------------~l~~~~~~aDiVIsAtg~p~---~---i 193 (269)
-.+|.|||+|.+ |.+++..|.+.|.+|++ ++|+.. +..+.++++|+||.+++... . +
T Consensus 23 mmkI~IIG~G~m-G~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l 101 (220)
T 4huj_A 23 MTTYAIIGAGAI-GSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYDSIADIVTQV 101 (220)
T ss_dssp SCCEEEEECHHH-HHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGGGHHHHHTTC
T ss_pred CCEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChHHHHHHHHHh
Confidence 368999999886 99999999999999998 665532 12344688999999997322 1 2
Q ss_pred cCCCcCCCcEEEEeee
Q 024306 194 RGSWLKPGAVVLDVGT 209 (269)
Q Consensus 194 ~~~~~~~g~vViDv~~ 209 (269)
.+ + ++.+|+|+.-
T Consensus 102 ~~--~-~~~ivi~~~~ 114 (220)
T 4huj_A 102 SD--W-GGQIVVDASN 114 (220)
T ss_dssp SC--C-TTCEEEECCC
T ss_pred hc--c-CCCEEEEcCC
Confidence 22 3 5789999883
No 208
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=96.56 E-value=0.0038 Score=56.28 Aligned_cols=70 Identities=19% Similarity=0.220 Sum_probs=52.2
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------------CCHhhhcCCCCEEEeccCCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------------KNPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------------~~l~~~~~~aDiVIsAtg~p 190 (269)
.-+|.|||+|.+ |.+++..|++.|.+|++++|+. .+..+ +.++|+||.+++.+
T Consensus 14 ~~kI~iIG~G~m-G~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSW-GTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPVQ 91 (335)
T ss_dssp CCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCGG
T ss_pred CCcEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCHH
Confidence 357999999886 9999999999999999998752 12334 67899999999853
Q ss_pred Cc--ccCCCcC-CCcEEEEee
Q 024306 191 NL--VRGSWLK-PGAVVLDVG 208 (269)
Q Consensus 191 ~~--i~~~~~~-~g~vViDv~ 208 (269)
.. +-.+ ++ ++.+||++.
T Consensus 92 ~~~~v~~~-l~~~~~~vv~~~ 111 (335)
T 1z82_A 92 YIREHLLR-LPVKPSMVLNLS 111 (335)
T ss_dssp GHHHHHTT-CSSCCSEEEECC
T ss_pred HHHHHHHH-hCcCCCEEEEEe
Confidence 31 1111 22 688999986
No 209
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=96.56 E-value=0.01 Score=53.94 Aligned_cols=140 Identities=14% Similarity=0.146 Sum_probs=96.0
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|.++.++.-. +. .-|-+.+.++-|+.- +|+|.+--|-. ..+..+... -.+-.+|.|
T Consensus 65 SFE~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvLs~~--~D~iviR~~~~------~~~~~lA~~---~~vPVINag 132 (323)
T 3gd5_A 65 SFTVAMYQLGGQVIDLSPS-NTQVGRGEPVRDTARVLGRY--VDGLAIRTFAQ------TELEEYAHY---AGIPVINAL 132 (323)
T ss_dssp HHHHHHHHTTCEEEEC-----------CCHHHHHHHHTTT--CSEEEEECSSH------HHHHHHHHH---HCSCEEEEE
T ss_pred hHHHHHHHcCCeEEEeCcc-cccCCCCCCHHHHHHHHHHh--CCEEEEecCCh------hHHHHHHHh---CCCCEEeCC
Confidence 4567899999999876421 11 135588888888873 89999987732 222222111 123345653
Q ss_pred ccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------
Q 024306 105 NLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------- 170 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------- 170 (269)
. +.+.||=+.+ ++.+.++.+ .++|.+|+++|-++.|++.++..+...|++|+++....
T Consensus 133 ~-------~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~ 204 (323)
T 3gd5_A 133 T-------DHEHPCQVVADLLTIRENFG-RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASE 204 (323)
T ss_dssp C-------SSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHH
T ss_pred C-------CCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHH
Confidence 2 3456887777 455555554 79999999999998899999999999999999996432
Q ss_pred ------------CCHhhhcCCCCEEEecc
Q 024306 171 ------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 171 ------------~~l~~~~~~aDiVIsAt 187 (269)
.++.+.+++||+|++-+
T Consensus 205 ~a~~~g~~v~~~~d~~eav~~aDvvyt~~ 233 (323)
T 3gd5_A 205 IAGRTGAEVQILRDPFEAARGAHILYTDV 233 (323)
T ss_dssp HHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred HHHHcCCeEEEECCHHHHhcCCCEEEEec
Confidence 35667899999999654
No 210
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.56 E-value=0.014 Score=53.14 Aligned_cols=146 Identities=15% Similarity=0.094 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccc
Q 024306 22 SQTYVRNKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 99 (269)
Q Consensus 22 s~~y~~~~~~~~~~~Gi~~~~~~~~~~~--~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~ 99 (269)
|-.=--+-..++.++|.++.++.-.... .-|-+.+.++-|+.- +|+|.+--|-. ..+..+.... ++-
T Consensus 69 STRTR~SFE~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~--~D~iviR~~~~------~~~~~lA~~~---~vP 137 (325)
T 1vlv_A 69 STRTRLAFETAFAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRM--VDAIMFRGYKQ------ETVEKLAEYS---GVP 137 (325)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHTT--CSEEEEESSCH------HHHHHHHHHH---CSC
T ss_pred CcchHHHHHHHHHHcCCeEEEECCccccCCCCcCHHHHHHHHHHh--CCEEEEECCCh------HHHHHHHHhC---CCC
Confidence 3333334667899999999988632210 134577888888774 78999987732 2222221111 233
Q ss_pred cceecccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC--------
Q 024306 100 PLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL-------- 169 (269)
Q Consensus 100 ~~n~g~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~-------- 169 (269)
.+|. + ++.+.||=+.+ ++.+.++. ..++|.+|+++|-+ .-|++.++..|...|++|+++...
T Consensus 138 VINa-----~--~~~~HPtQaLaDl~Ti~e~~-g~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~ 209 (325)
T 1vlv_A 138 VYNG-----L--TDEFHPTQALADLMTIEENF-GRLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDV 209 (325)
T ss_dssp EEES-----C--CSSCCHHHHHHHHHHHHHHH-SCSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHH
T ss_pred EEeC-----C--CCCCCcHHHHHHHHHHHHHh-CCcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHH
Confidence 4553 1 23566998887 45555555 47999999999997 567999999999999999999543
Q ss_pred -----------------CCCHhhhcCCCCEEEec
Q 024306 170 -----------------TKNPEQITSEADIVIAA 186 (269)
Q Consensus 170 -----------------t~~l~~~~~~aDiVIsA 186 (269)
+.++.+.+++||+|.+-
T Consensus 210 ~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~ 243 (325)
T 1vlv_A 210 FKRCQEIVKETDGSVSFTSNLEEALAGADVVYTD 243 (325)
T ss_dssp HHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEec
Confidence 23566789999999964
No 211
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.55 E-value=0.0061 Score=55.76 Aligned_cols=76 Identities=20% Similarity=0.167 Sum_probs=51.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------------CCHhhhc---CCCCEEEeccCCCCc
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------KNPEQIT---SEADIVIAAAGVANL 192 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------------~~l~~~~---~~aDiVIsAtg~p~~ 192 (269)
-.|++|+|.|++|.+|..+++++...|++|+.+.+.. .++.+.+ ..+|+||+++|.+..
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~ 261 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTE 261 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhh
Confidence 4799999999755679999999999999977664321 1222222 357888988887621
Q ss_pred -c--cCCCcCCCcEEEEeee
Q 024306 193 -V--RGSWLKPGAVVLDVGT 209 (269)
Q Consensus 193 -i--~~~~~~~g~vViDv~~ 209 (269)
+ .-+.++++-.++.++.
T Consensus 262 ~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 262 TWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp HHGGGGBCSSSCCEEEESCC
T ss_pred hhHHHHHhhcCCcEEEEeCC
Confidence 2 2235677777777774
No 212
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=96.55 E-value=0.0026 Score=54.77 Aligned_cols=37 Identities=27% Similarity=0.321 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.++
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 39 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN 39 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998888999999999999999998765
No 213
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.55 E-value=0.0071 Score=55.01 Aligned_cols=93 Identities=15% Similarity=0.224 Sum_probs=63.1
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------CHhh
Q 024306 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQ 175 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------------~l~~ 175 (269)
+||....++..+++.++ -.|++|+|+|+|+ +|..+++++..+|++|+.+.+... ++.+
T Consensus 161 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~ 238 (360)
T 1piw_A 161 LLCGGLTVYSPLVRNGC-GPGKKVGIVGLGG-IGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGE 238 (360)
T ss_dssp GGTHHHHHHHHHHHTTC-STTCEEEEECCSH-HHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHH
T ss_pred hhhhHHHHHHHHHHcCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHH
Confidence 34544445666665333 3689999999955 599999999999999888765432 2222
Q ss_pred hc-CCCCEEEeccCC--CCccc--CCCcCCCcEEEEeeec
Q 024306 176 IT-SEADIVIAAAGV--ANLVR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 176 ~~-~~aDiVIsAtg~--p~~i~--~~~~~~g~vViDv~~~ 210 (269)
.+ ..+|+||.++|. +..+. -+.++++-.++.++..
T Consensus 239 ~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 239 KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCC
T ss_pred HhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCC
Confidence 22 358999999987 54432 3457777777777754
No 214
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.55 E-value=0.0012 Score=59.37 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=55.5
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhh----hc--CCCCEEEeccC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQ----IT--SEADIVIAAAG 188 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~----~~--~~aDiVIsAtg 188 (269)
-.|++|+|+|++|.+|..+++++..+|++|+++.++. .++.+ .. +..|+||+++|
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g 226 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVG 226 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCC
Confidence 4799999999656679999999999999988876641 12222 22 24899999998
Q ss_pred CCCc-ccCCCcCCCcEEEEeeecC
Q 024306 189 VANL-VRGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 189 ~p~~-i~~~~~~~g~vViDv~~~~ 211 (269)
.+.+ -.-+.++++-.++.+|...
T Consensus 227 ~~~~~~~~~~l~~~G~iv~~G~~~ 250 (334)
T 3qwb_A 227 KDTFEISLAALKRKGVFVSFGNAS 250 (334)
T ss_dssp GGGHHHHHHHEEEEEEEEECCCTT
T ss_pred hHHHHHHHHHhccCCEEEEEcCCC
Confidence 6432 2234677877888888643
No 215
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=96.54 E-value=0.0032 Score=54.77 Aligned_cols=57 Identities=14% Similarity=0.183 Sum_probs=45.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------C------Hhhhc-------CCCCEEEeccCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------N------PEQIT-------SEADIVIAAAGV 189 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------~------l~~~~-------~~aDiVIsAtg~ 189 (269)
+++||+++|.|+++-+|+.++..|+++|++|.++.|... | +.+.+ ...|+||+..|.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~ 84 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI 84 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 478999999999988999999999999999999877521 1 12222 368999988884
No 216
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.53 E-value=0.0037 Score=59.41 Aligned_cols=74 Identities=22% Similarity=0.269 Sum_probs=53.8
Q ss_pred ceEEEEcCCcccHHHHHHHHHhC--CCEEEEEeCCC---------------------------------CCHhhhcCCCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALT---------------------------------KNPEQITSEAD 181 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~--ga~Vti~~~~t---------------------------------~~l~~~~~~aD 181 (269)
.+|.|||.|.+ |.+++..|++. |.+|++++++. .++.+.+++||
T Consensus 6 mkI~VIG~G~m-G~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aD 84 (467)
T 2q3e_A 6 KKICCIGAGYV-GGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEAD 84 (467)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred cEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence 47999999886 99999999998 78999997642 12234567799
Q ss_pred EEEeccCCCCccc--------------------CCCcCCCcEEEEeeecC
Q 024306 182 IVIAAAGVANLVR--------------------GSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 182 iVIsAtg~p~~i~--------------------~~~~~~g~vViDv~~~~ 211 (269)
+||.+++.|.-.+ ...++++++|+|....+
T Consensus 85 vViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 134 (467)
T 2q3e_A 85 LVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVP 134 (467)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCC
T ss_pred EEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCC
Confidence 9999988654211 12357788999875443
No 217
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.52 E-value=0.0037 Score=59.80 Aligned_cols=54 Identities=19% Similarity=0.219 Sum_probs=45.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------CHhhhcCCCCEEEeccCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------~l~~~~~~aDiVIsAtg~ 189 (269)
+++|+|.|++|.+|+.++..|.++|.+|+++.|... .+.+.+.++|+||+..+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCCC
Confidence 789999999999999999999999999999987632 234667889999988774
No 218
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.52 E-value=0.0044 Score=58.49 Aligned_cols=37 Identities=22% Similarity=0.296 Sum_probs=34.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++||+|.|||.|++ |+++|+.|.++|++|++++.+.
T Consensus 6 ~~~~k~v~viG~G~s-G~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 6 TFENKKVLVLGLARS-GEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTTTCEEEEECCTTT-HHHHHHHHHHTTCEEEEEESSC
T ss_pred hcCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEeCCc
Confidence 578999999999998 9999999999999999998753
No 219
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=96.52 E-value=0.0027 Score=60.54 Aligned_cols=72 Identities=21% Similarity=0.280 Sum_probs=55.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------------CCHhhhcCC---CCEEEeccCCCC----
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------KNPEQITSE---ADIVIAAAGVAN---- 191 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------------~~l~~~~~~---aDiVIsAtg~p~---- 191 (269)
++|.|||.|.+ |.+++..|++.|.+|++++|+. .++.+.+++ +|+||.+++.+.
T Consensus 6 ~~IgvIG~G~m-G~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~ 84 (474)
T 2iz1_A 6 ANFGVVGMAVM-GKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDA 84 (474)
T ss_dssp BSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHH
T ss_pred CcEEEEeeHHH-HHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHH
Confidence 57999999886 9999999999999999998752 234455554 999999998742
Q ss_pred ccc--CCCcCCCcEEEEeee
Q 024306 192 LVR--GSWLKPGAVVLDVGT 209 (269)
Q Consensus 192 ~i~--~~~~~~g~vViDv~~ 209 (269)
.+. ...+++|.+|||++.
T Consensus 85 vl~~l~~~l~~g~iiId~s~ 104 (474)
T 2iz1_A 85 TIKSLLPLLDIGDILIDGGN 104 (474)
T ss_dssp HHHHHGGGCCTTCEEEECSC
T ss_pred HHHHHHhhCCCCCEEEECCC
Confidence 121 235678899999874
No 220
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.51 E-value=0.013 Score=53.01 Aligned_cols=140 Identities=12% Similarity=0.120 Sum_probs=97.1
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|.++.++.-. +. .-|-+.+.++-|+.- +|+|.+--|-. ..+..+.... .+-.+|.|
T Consensus 62 SFE~A~~~LGg~~i~l~~~-~ss~~kgEsl~DTarvls~~--~D~iviR~~~~------~~~~~lA~~~---~vPVINag 129 (309)
T 4f2g_A 62 SFEAGIFQLGGHAVFMSTR-DTQLGRGEPVEDSAQVISRM--VDIIMIRTFEQ------DIIQRFAENS---RVPVINGL 129 (309)
T ss_dssp HHHHHHHHTTCEEEEECCS-SCEETBEECHHHHHHHHHHH--CSEEEEECSCH------HHHHHHHHTC---SSCEEEEE
T ss_pred hHHHHHHHcCCeEEEcCcc-cccCCCCCCHHHHHHHHHHh--CCEEEEecCCH------HHHHHHHHhC---CCCEEECC
Confidence 4567899999999877532 11 134577777777763 78999987732 2222221111 23355653
Q ss_pred ccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC--------------
Q 024306 105 NLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-------------- 169 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~-------------- 169 (269)
.+.+.||=+.+ ++.+.|+.+ +++|++|+++|-++.|++.++..+...|++|+++...
T Consensus 130 -------~~~~HPtQaLaDl~Ti~e~~g-~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g 201 (309)
T 4f2g_A 130 -------TNEYHPCQVLADIFTYYEHRG-PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESA 201 (309)
T ss_dssp -------CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGG
T ss_pred -------CCccCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcC
Confidence 23456887777 445555554 7999999999999999999999999999999998542
Q ss_pred -----CCCHhhhcCCCCEEEecc
Q 024306 170 -----TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 -----t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+.+++||+|++-+
T Consensus 202 ~~v~~~~d~~eav~~aDvvyt~~ 224 (309)
T 4f2g_A 202 PFYQVFDDPNEACKGADLVTTDV 224 (309)
T ss_dssp GGEEECSSHHHHTTTCSEEEECC
T ss_pred CeEEEEcCHHHHhcCCCEEEecc
Confidence 236678899999999755
No 221
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=96.51 E-value=0.0039 Score=54.21 Aligned_cols=57 Identities=11% Similarity=0.134 Sum_probs=44.2
Q ss_pred ccceEEEEcC----------------CcccHHHHHHHHHhCCCEEEEEeCCCC----------------------CHhhh
Q 024306 135 MGKNAVVIGR----------------SNIVGLPTSLLLQRHHATVSIVHALTK----------------------NPEQI 176 (269)
Q Consensus 135 ~gk~v~ViG~----------------gg~vg~~~a~~L~~~ga~Vti~~~~t~----------------------~l~~~ 176 (269)
+||+|+|-|+ +|-+|.++|..|..+||+|+++++... .+.+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~~v~~~ 81 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQER 81 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHHHHHHh
Confidence 5899999998 565599999999999999999987531 01234
Q ss_pred cCCCCEEEeccCCCC
Q 024306 177 TSEADIVIAAAGVAN 191 (269)
Q Consensus 177 ~~~aDiVIsAtg~p~ 191 (269)
...+|++|.+.+...
T Consensus 82 ~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 82 VQDYQVLIHSMAVSD 96 (232)
T ss_dssp GGGCSEEEECSBCCS
T ss_pred cCCCCEEEEcCcccc
Confidence 567999999888544
No 222
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=96.51 E-value=0.0048 Score=56.10 Aligned_cols=57 Identities=23% Similarity=0.249 Sum_probs=46.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCCC-----------------------CHhhhcCCCCEEEeccC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK-----------------------NPEQITSEADIVIAAAG 188 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t~-----------------------~l~~~~~~aDiVIsAtg 188 (269)
.+++++|+|.|++|.+|+.++..|.++| ++|+++.|... .+.+.++.+|+||...+
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 4678999999999999999999999999 99999876421 12345678899998877
Q ss_pred C
Q 024306 189 V 189 (269)
Q Consensus 189 ~ 189 (269)
.
T Consensus 109 ~ 109 (377)
T 2q1s_A 109 Y 109 (377)
T ss_dssp C
T ss_pred c
Confidence 4
No 223
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=96.51 E-value=0.0023 Score=55.73 Aligned_cols=39 Identities=26% Similarity=0.293 Sum_probs=32.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.+++||+++|.|+++-+|++++..|+++|++|.++.|+.
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 357899999999988889999999999999999998764
No 224
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.50 E-value=0.0034 Score=59.63 Aligned_cols=58 Identities=14% Similarity=0.224 Sum_probs=47.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-CC-----------------HhhhcCCCCEEEeccCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KN-----------------PEQITSEADIVIAAAGVA 190 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-~~-----------------l~~~~~~aDiVIsAtg~p 190 (269)
.+++|++|+|+|.|.+ |...+..|.+.||.|+++.... +. -.+.+.++|+||.+|+.+
T Consensus 8 ~~l~~~~vlVvGgG~v-a~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~~ 83 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDV-AERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDD 83 (457)
T ss_dssp ECCBTCEEEEECCSHH-HHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCH
T ss_pred EECCCCEEEEECCCHH-HHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCCH
Confidence 4689999999999986 9999999999999999987542 00 123467899999999975
No 225
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=96.50 E-value=0.0016 Score=57.34 Aligned_cols=71 Identities=21% Similarity=0.343 Sum_probs=52.8
Q ss_pred ceEEEEcCCcccHHHHHHHHHhC--CCEEEEEeCCC----------------CCHhhhcCCCCEEEeccCCCC---ccc-
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVR- 194 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~--ga~Vti~~~~t----------------~~l~~~~~~aDiVIsAtg~p~---~i~- 194 (269)
++|.|||.|.+ |.+++..|.+. +.+|++++++. .++.+.++++|+||.+++... .+.
T Consensus 7 ~~I~iIG~G~m-G~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~ 85 (290)
T 3b1f_A 7 KTIYIAGLGLI-GASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFIKI 85 (290)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHHHHHHHH
T ss_pred ceEEEEeeCHH-HHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHHHHHHHH
Confidence 68999999886 99999999887 56899987652 234456788999999998422 221
Q ss_pred -CCC-cCCCcEEEEee
Q 024306 195 -GSW-LKPGAVVLDVG 208 (269)
Q Consensus 195 -~~~-~~~g~vViDv~ 208 (269)
... ++++.+|+|++
T Consensus 86 l~~~~l~~~~ivi~~~ 101 (290)
T 3b1f_A 86 LADLDLKEDVIITDAG 101 (290)
T ss_dssp HHTSCCCTTCEEECCC
T ss_pred HHhcCCCCCCEEEECC
Confidence 234 67888888875
No 226
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.50 E-value=0.0022 Score=57.67 Aligned_cols=56 Identities=20% Similarity=0.246 Sum_probs=44.6
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------CCHhhhcC--CCCEEE
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITS--EADIVI 184 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------------------~~l~~~~~--~aDiVI 184 (269)
+.++|+|+|++|.+|+.++..|.++|.+|+++.|.. .++.+.++ ++|+||
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 88 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV 88 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence 467899999988899999999999999999998754 11345567 899999
Q ss_pred eccCCC
Q 024306 185 AAAGVA 190 (269)
Q Consensus 185 sAtg~p 190 (269)
++++..
T Consensus 89 ~~a~~~ 94 (346)
T 3i6i_A 89 STVGGE 94 (346)
T ss_dssp ECCCGG
T ss_pred ECCchh
Confidence 888753
No 227
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.49 E-value=0.0016 Score=60.90 Aligned_cols=71 Identities=15% Similarity=0.231 Sum_probs=51.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC---CEEEEEeCCCC----------------------------CHhhhcCC--CCEE
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALTK----------------------------NPEQITSE--ADIV 183 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~g---a~Vti~~~~t~----------------------------~l~~~~~~--aDiV 183 (269)
++|+|+|+|++ |+.++..|++.+ ..|+++.|+.. ++.+.+++ +|+|
T Consensus 2 ~kVlIiGaGgi-G~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV 80 (405)
T 4ina_A 2 AKVLQIGAGGV-GGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV 80 (405)
T ss_dssp CEEEEECCSHH-HHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence 58999999875 999999999998 38999977521 12334444 8999
Q ss_pred EeccCCC-C-cccCCCcCCCcEEEEee
Q 024306 184 IAAAGVA-N-LVRGSWLKPGAVVLDVG 208 (269)
Q Consensus 184 IsAtg~p-~-~i~~~~~~~g~vViDv~ 208 (269)
|+++|.. + .+-...++.|..++|+.
T Consensus 81 in~ag~~~~~~v~~a~l~~g~~vvD~a 107 (405)
T 4ina_A 81 LNIALPYQDLTIMEACLRTGVPYLDTA 107 (405)
T ss_dssp EECSCGGGHHHHHHHHHHHTCCEEESS
T ss_pred EECCCcccChHHHHHHHHhCCCEEEec
Confidence 9999842 1 13334566788899974
No 228
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=96.48 E-value=0.0031 Score=54.25 Aligned_cols=38 Identities=24% Similarity=0.247 Sum_probs=34.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~ 42 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD 42 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 46789999999998888999999999999999999876
No 229
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.48 E-value=0.0032 Score=55.69 Aligned_cols=54 Identities=15% Similarity=0.099 Sum_probs=43.7
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-C-----------------------------CHhhhcCCCCEEEe
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-K-----------------------------NPEQITSEADIVIA 185 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-~-----------------------------~l~~~~~~aDiVIs 185 (269)
.++|+|+|++|.+|+.++..|.++|++|+++.|.. . ++.+.++.+|+||+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 46899999988889999999999999999987763 0 13456778899998
Q ss_pred ccCC
Q 024306 186 AAGV 189 (269)
Q Consensus 186 Atg~ 189 (269)
+++.
T Consensus 84 ~a~~ 87 (321)
T 3c1o_A 84 ALPF 87 (321)
T ss_dssp CCCG
T ss_pred CCCc
Confidence 8774
No 230
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.48 E-value=0.004 Score=56.19 Aligned_cols=93 Identities=14% Similarity=0.134 Sum_probs=62.9
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhh
Q 024306 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQI 176 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~ 176 (269)
+||....++..+++.++ -.|++|+|+|+|+ +|..+++++...|++|+.+.++. .++.+.
T Consensus 146 l~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~-vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~ 223 (339)
T 1rjw_A 146 IFCAGVTTYKALKVTGA-KPGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKF 223 (339)
T ss_dssp GGTHHHHHHHHHHHHTC-CTTCEEEEECCST-THHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHH
T ss_pred hhhhHHHHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHH
Confidence 45544445666665543 3689999999977 69999999999999988886531 122222
Q ss_pred ----cCCCCEEEeccCCCCccc--CCCcCCCcEEEEeeec
Q 024306 177 ----TSEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 177 ----~~~aDiVIsAtg~p~~i~--~~~~~~g~vViDv~~~ 210 (269)
...+|+||+++|.+..+. -+.++++-.++.++..
T Consensus 224 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 224 MKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp HHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred HHHHhCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEeccc
Confidence 246899999999743322 2346776677777754
No 231
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=96.48 E-value=0.0026 Score=55.14 Aligned_cols=37 Identities=24% Similarity=0.246 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998888999999999999999998775
No 232
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.48 E-value=0.016 Score=52.35 Aligned_cols=164 Identities=12% Similarity=0.044 Sum_probs=109.8
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|.++.++.-.... .-|-+.+..+-|+.- +|+|.+-.|-.. ....+.+.. .+-.+|.|
T Consensus 61 SFe~A~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~--~D~iviR~~~~~--~~~~la~~~-------~vPVINag 129 (308)
T 1ml4_A 61 SFESAMHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQY--CDVIVIRHPKEG--AARLAAEVA-------EVPVINAG 129 (308)
T ss_dssp HHHHHHHHTTCEEEEESCGGGSGGGGTCCHHHHHHHHTTT--CSEEEEEESSTT--HHHHHHHTC-------SSCEEEEE
T ss_pred HHHHHHHHhCCeEEEeCCCccccccCCCCHHHHHHHHHHh--CcEEEEecCChh--HHHHHHHhC-------CCCEEeCc
Confidence 4567899999999888533211 125678888888774 789999887443 223333321 13345642
Q ss_pred ccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCC--cccHHHHHHHHHhCCCEEEEEeCC-------------
Q 024306 105 NLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL------------- 169 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~g--g~vg~~~a~~L~~~ga~Vti~~~~------------- 169 (269)
. .+.+.||=+.+=+--++++...++|.+|+++|-+ +-|++.++..+...|++|+++...
T Consensus 130 ~------g~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~ 203 (308)
T 1ml4_A 130 D------GSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELR 203 (308)
T ss_dssp E------TTSCCHHHHHHHHHHHHHHSSCSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHH
T ss_pred c------CCccCcHHHHHHHHHHHHHhCCCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHH
Confidence 2 1345688888844444445557999999999986 357999999999999999999543
Q ss_pred --------CCCHhhhcCCCCEEEeccCC----C----------Cc-ccCCCc---CCCcEEEEee
Q 024306 170 --------TKNPEQITSEADIVIAAAGV----A----------NL-VRGSWL---KPGAVVLDVG 208 (269)
Q Consensus 170 --------t~~l~~~~~~aDiVIsAtg~----p----------~~-i~~~~~---~~g~vViDv~ 208 (269)
+.++.+.+++||+|.+-.=. + .+ ++.+.+ +++++|+=..
T Consensus 204 ~~g~~~~~~~d~~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 204 EKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp HTTCCEEEESCTHHHHTTCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred HcCCeEEEEcCHHHHhcCCCEEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 13567889999999975521 1 23 666665 4677776544
No 233
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=96.48 E-value=0.0027 Score=54.41 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=34.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 45789999999998888999999999999999998775
No 234
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.48 E-value=0.0023 Score=56.41 Aligned_cols=71 Identities=17% Similarity=0.345 Sum_probs=51.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------------CHhhhcC---CCCEEEecc
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------NPEQITS---EADIVIAAA 187 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------------------~l~~~~~---~aDiVIsAt 187 (269)
.+|.|||+|.+ |.+++..|.+.|.+|++++++.. +..+... ++|+||.++
T Consensus 4 m~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v 82 (316)
T 2ew2_A 4 MKIAIAGAGAM-GSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT 82 (316)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred CeEEEECcCHH-HHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence 47999999886 99999999999999999987521 1112233 899999999
Q ss_pred CCCC---ccc--CCCcCCCcEEEEee
Q 024306 188 GVAN---LVR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 188 g~p~---~i~--~~~~~~g~vViDv~ 208 (269)
+.+. .+. ...++++++|+++.
T Consensus 83 ~~~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 83 KAQQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp CHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred ccccHHHHHHHHHHhcCCCCEEEEec
Confidence 8432 111 22467788888875
No 235
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.48 E-value=0.0028 Score=56.44 Aligned_cols=36 Identities=19% Similarity=0.357 Sum_probs=32.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.+++|++|+|+|.|.+ |...+..|.+.||.|+++..
T Consensus 9 ~~l~~k~VLVVGgG~v-a~rka~~Ll~~Ga~VtViap 44 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEV-GLTRLYKLMPTGCKLTLVSP 44 (274)
T ss_dssp ECCTTCEEEEEEESHH-HHHHHHHHGGGTCEEEEEEE
T ss_pred EEcCCCEEEEECCcHH-HHHHHHHHHhCCCEEEEEcC
Confidence 4689999999999986 99999999999999998853
No 236
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=96.47 E-value=0.031 Score=51.47 Aligned_cols=140 Identities=9% Similarity=0.053 Sum_probs=96.2
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|.++.++.-. +. .-|-+.+.++-|+.- +|+|.+--|-. ..+..+.... ++-.+|.|
T Consensus 58 SFE~A~~~LGg~vi~l~~~-~ssl~kgEsl~DTarvLs~y--~D~IviR~~~~------~~~~~lA~~~---~vPVINag 125 (355)
T 4a8p_A 58 SFETAMEQLGGHGEYLAPG-QIQLGGHETIEDTSRVLSRL--VDILMARVERH------HSIVDLANCA---TIPVINGM 125 (355)
T ss_dssp HHHHHHHHTTCEEEEECBT-TBCBTTTBCHHHHHHHHTTT--CSEEEEECSSH------HHHHHHHHHC---SSCEEECC
T ss_pred hHHHHHHHcCCeEEEeCcc-cccCCCCcCHHHHHHHHHHh--CCEEEEecCcH------HHHHHHHHhC---CCCEEeCC
Confidence 3567899999999987532 11 135688888888874 89999987732 2222221111 23345643
Q ss_pred ccccCCCCCccccCCHHHH-HHHHHHh--CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------
Q 024306 105 NLAMRGREPLFIPCTPKGC-IELLIRS--GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------- 170 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g~-~~~l~~~--~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------- 170 (269)
++.+.||=+.+= +.+.++. +.+++|.+|+++|-++.|++.++..+...|++|+++....
T Consensus 126 -------~~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~ 198 (355)
T 4a8p_A 126 -------SDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKL 198 (355)
T ss_dssp -------CSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHH
T ss_pred -------CCCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHH
Confidence 244668877774 4444444 3379999999999998899999999999999999996542
Q ss_pred --------------CCHhhhcCCCCEEEecc
Q 024306 171 --------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 171 --------------~~l~~~~~~aDiVIsAt 187 (269)
.++. .+++||+|.+-+
T Consensus 199 ~~~a~~~G~~v~~~~d~~-av~~aDVVytd~ 228 (355)
T 4a8p_A 199 AKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 228 (355)
T ss_dssp HHHHHHHSCEEEEECCGG-GGTTCSEEEECC
T ss_pred HHHHHHcCCeEEEECCHH-HHcCCCEEEecc
Confidence 2455 789999999743
No 237
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.47 E-value=0.0035 Score=57.21 Aligned_cols=95 Identities=22% Similarity=0.253 Sum_probs=62.2
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhh-
Q 024306 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQ- 175 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~- 175 (269)
+||....+...+.+..---.|++|+|+|+|+ +|..+++++...|++|+++.+.. .++.+
T Consensus 170 l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~ 248 (363)
T 3uog_A 170 LPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVER 248 (363)
T ss_dssp TTTHHHHHHHHHTTTTCCCTTCEEEEESSBH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHH
T ss_pred cccHHHHHHHHHHHhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHH
Confidence 3444444555553333334799999999665 59999999999999988876541 12222
Q ss_pred ---hc--CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeecC
Q 024306 176 ---IT--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 176 ---~~--~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~~ 211 (269)
.. +.+|+||+++|.+.+ -.-+.++++-.++.+|...
T Consensus 249 v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~ 290 (363)
T 3uog_A 249 VYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLE 290 (363)
T ss_dssp HHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCS
T ss_pred HHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCC
Confidence 22 258999999984322 2234577877888888653
No 238
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=96.47 E-value=0.0027 Score=55.31 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999998888999999999999999998775
No 239
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=96.47 E-value=0.0019 Score=53.22 Aligned_cols=53 Identities=19% Similarity=0.297 Sum_probs=41.9
Q ss_pred cc-eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------CHhhhcC---CCCEEEeccCC
Q 024306 136 GK-NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------NPEQITS---EADIVIAAAGV 189 (269)
Q Consensus 136 gk-~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------~l~~~~~---~aDiVIsAtg~ 189 (269)
+| +++|.|+++-+|+.++..|+ +|++|+++.|... ++.+.++ ..|+||+..|.
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~ 68 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATGS 68 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 56 89999999999999999999 9999999987631 1233333 47999988884
No 240
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.47 E-value=0.0045 Score=56.00 Aligned_cols=93 Identities=13% Similarity=0.090 Sum_probs=61.5
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------CCHhhh
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------KNPEQI 176 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------------~~l~~~ 176 (269)
||....++..+++.++ -.|++|+|+|++|.+|..+++.+..+|++|+++.++. .++.+.
T Consensus 152 ~~~~~ta~~~l~~~~~-~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~ 230 (347)
T 2hcy_A 152 LCAGITVYKALKSANL-MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGA 230 (347)
T ss_dssp GTHHHHHHHHHHTTTC-CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHH
T ss_pred hhhHHHHHHHHHhcCC-CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHH
Confidence 4433334555654432 3689999999966679999999999999988876542 122222
Q ss_pred cC-----CCCEEEeccCCCCcc--cCCCcCCCcEEEEeeec
Q 024306 177 TS-----EADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 177 ~~-----~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
++ ..|+||+++|.+..+ --+.++++-.++.++..
T Consensus 231 ~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 231 VLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp HHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCC
T ss_pred HHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 22 479999998864332 23456776677777754
No 241
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=96.46 E-value=0.034 Score=51.17 Aligned_cols=142 Identities=12% Similarity=0.140 Sum_probs=96.4
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~--~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..++.++|.++.++...... .-|-+.+.++-|..- +|+|.+-.|-.. ....+.+. -.+-.+|.|
T Consensus 83 SFE~A~~~LGg~~i~l~~~~s~l~kgEsl~DTarvLs~~--~D~IviR~~~~~--~~~~lA~~-------s~vPVINag- 150 (353)
T 3sds_A 83 STEGAVVKMGGHPMFLGKDDIQLGVNESLYDTSVVISSM--VSCIVARVGPHS--DIANLAKH-------SSVPVINAL- 150 (353)
T ss_dssp HHHHHHHHTTCEEEEECTTTC--CCSSCHHHHHHHHHTS--CSEEEEECSSHH--HHHHHHHH-------CSSCEEEEE-
T ss_pred HHHHHHHHcCCeEEecCCccccccCCccHHHHHHHHHHh--cCEEEEEeCChH--HHHHHHhh-------CCCCEEECC-
Confidence 4567899999999877532210 125677888888774 789988766221 11222221 123345653
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhCCC------------CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSGVE------------IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-- 170 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~~~------------l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-- 170 (269)
.+.+.||=+.+ ++.+.|+.+.- ++|.+|+++|-+..|++.++..|...|++|+++....
T Consensus 151 ------~d~~HPtQaLaDl~TI~E~~G~~~~~~~~~~~~~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~ 224 (353)
T 3sds_A 151 ------CDTFHPLQAIADFLTIHESFASQSATHGTHPSSLGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYE 224 (353)
T ss_dssp ------CSSCCHHHHHHHHHHHHHHTC--------CTTCCSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred ------CCCCCcHHHHHHHHHHHHHhCCCcccccccccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccC
Confidence 12456887777 55555665532 5999999999999999999999999999999985431
Q ss_pred -------------------------CCHhhhcCCCCEEEecc
Q 024306 171 -------------------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 171 -------------------------~~l~~~~~~aDiVIsAt 187 (269)
.++.+.+++||+|++-+
T Consensus 225 ~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvytd~ 266 (353)
T 3sds_A 225 IPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVTDT 266 (353)
T ss_dssp CCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEECC
T ss_pred CCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEeCC
Confidence 35667899999999754
No 242
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=96.45 E-value=0.0032 Score=56.50 Aligned_cols=52 Identities=21% Similarity=0.252 Sum_probs=42.9
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcCCCCEEEeccCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~ 189 (269)
.-|+|.|||.|-+ |.++|..|+ .|.+|++.+++.. ++.+ +++||+||.+++-
T Consensus 11 ~~~~V~vIG~G~M-G~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe 83 (293)
T 1zej_A 11 HHMKVFVIGAGLM-GRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFE 83 (293)
T ss_dssp -CCEEEEECCSHH-HHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCS
T ss_pred CCCeEEEEeeCHH-HHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcC
Confidence 4589999999887 999999999 9999999987631 2333 7889999999984
No 243
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=96.45 E-value=0.0041 Score=55.47 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=43.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------CHhhhcCC--CCEEEecc
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------NPEQITSE--ADIVIAAA 187 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------------~l~~~~~~--aDiVIsAt 187 (269)
.+++++|+|.|++|.+|+.++..|+++|++|+++.|... .+.+.++. .|+||+..
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 97 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA 97 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence 357899999999998999999999999999999876521 12234555 89999887
Q ss_pred CC
Q 024306 188 GV 189 (269)
Q Consensus 188 g~ 189 (269)
+.
T Consensus 98 ~~ 99 (333)
T 2q1w_A 98 AS 99 (333)
T ss_dssp CC
T ss_pred ee
Confidence 74
No 244
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=96.45 E-value=0.0043 Score=53.74 Aligned_cols=39 Identities=18% Similarity=0.207 Sum_probs=33.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.++++|+++|.|+++-+|++++..|+++|++|.++.|+.
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 55 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSG 55 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 357899999999998899999999999999999987753
No 245
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=96.45 E-value=0.0038 Score=56.03 Aligned_cols=57 Identities=14% Similarity=0.141 Sum_probs=46.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------------------CHhhhcCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------------NPEQITSEA 180 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------------------------~l~~~~~~a 180 (269)
++++++|+|.|++|.+|+.++..|.++|++|+++.|... ++.+.++..
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 367899999999888999999999999999999876421 123456788
Q ss_pred CEEEeccCC
Q 024306 181 DIVIAAAGV 189 (269)
Q Consensus 181 DiVIsAtg~ 189 (269)
|+||...+.
T Consensus 104 d~vih~A~~ 112 (352)
T 1sb8_A 104 DYVLHQAAL 112 (352)
T ss_dssp SEEEECCSC
T ss_pred CEEEECCcc
Confidence 999988874
No 246
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=96.44 E-value=0.0039 Score=54.29 Aligned_cols=40 Identities=23% Similarity=0.247 Sum_probs=35.4
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
...+++||+++|.|+++-+|+.+++.|+++|++|.++.|.
T Consensus 23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467899999999998888999999999999999998774
No 247
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=96.44 E-value=0.0035 Score=54.73 Aligned_cols=38 Identities=24% Similarity=0.168 Sum_probs=34.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 54 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN 54 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999998888999999999999999998775
No 248
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=96.42 E-value=0.0044 Score=54.73 Aligned_cols=38 Identities=21% Similarity=0.353 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999998888999999999999999988765
No 249
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=96.41 E-value=0.0033 Score=54.34 Aligned_cols=49 Identities=16% Similarity=0.215 Sum_probs=40.4
Q ss_pred eEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCCC---------------CHhhhcCCCCEEEeccC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK---------------NPEQITSEADIVIAAAG 188 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t~---------------~l~~~~~~aDiVIsAtg 188 (269)
+|.|||.|.+ |.+++..|.+.| .+|++++++.. +..+.+ ++|+||.+++
T Consensus 2 ~i~iiG~G~m-G~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~ 66 (263)
T 1yqg_A 2 NVYFLGGGNM-AAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK 66 (263)
T ss_dssp EEEEECCSHH-HHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC
T ss_pred EEEEECchHH-HHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC
Confidence 6899999886 999999999999 89999987631 233445 8999999998
No 250
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.41 E-value=0.011 Score=54.17 Aligned_cols=140 Identities=14% Similarity=0.170 Sum_probs=95.0
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|.++.++.-. +. .-|-+.+.++-|+.- +|+|.+--|-.. ....+.+.. .+-.+|.|
T Consensus 87 SFE~A~~~LGg~vi~l~~~-~ss~~kgEsl~DTarvLs~y--~D~IviR~~~~~--~~~~lA~~~-------~vPVINag 154 (340)
T 4ep1_A 87 SFEAGMVQLGGHGMFLNGK-EMQMGRGETVSDTAKVLSHY--IDGIMIRTFSHA--DVEELAKES-------SIPVINGL 154 (340)
T ss_dssp HHHHHHHHTTCEEEEEESC-C------CCTTHHHHHHHHH--CSEEEEECSCHH--HHHHHHHHC-------SSCEEEEE
T ss_pred HHHHHHHHcCCeEEEcCcc-cccCCCCCCHHHHHHHHHHh--CCEEEEecCChh--HHHHHHHhC-------CCCEEeCC
Confidence 4567899999999887532 21 123466666666663 788998877322 112222211 23345653
Q ss_pred ccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------
Q 024306 105 NLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------- 170 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------- 170 (269)
. +.+.||=+.+ ++.+.++.+ .++|.+|+++|-++.|++.++..+...|++|+++....
T Consensus 155 ~-------~~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~ 226 (340)
T 4ep1_A 155 T-------DDHHPCQALADLMTIYEETN-TFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALA 226 (340)
T ss_dssp C-------SSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHH
T ss_pred C-------CCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHH
Confidence 2 2456887777 455555554 69999999999998899999999999999999996432
Q ss_pred ------------CCHhhhcCCCCEEEecc
Q 024306 171 ------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 171 ------------~~l~~~~~~aDiVIsAt 187 (269)
.++.+.+++||+|++-.
T Consensus 227 ~a~~~G~~v~~~~d~~eav~~aDVvyt~~ 255 (340)
T 4ep1_A 227 IAKETGAEIEILHNPELAVNEADFIYTDV 255 (340)
T ss_dssp HHHHHCCCEEEESCHHHHHTTCSEEEECC
T ss_pred HHHHcCCeEEEECCHHHHhCCCCEEEecC
Confidence 35667899999999654
No 251
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=96.41 E-value=0.0033 Score=60.90 Aligned_cols=166 Identities=13% Similarity=0.173 Sum_probs=110.2
Q ss_pred HHHHHHHHc-CCe---EEEEEcCCCC-------C-------------------HHHHHHHHHhhhcCCCcCEEEEeCCCC
Q 024306 28 NKIKACEEV-GIK---SIVTEFADGC-------T-------------------EDEVLNALSNYNQDSSINGILVQLPLP 77 (269)
Q Consensus 28 ~~~~~~~~~-Gi~---~~~~~~~~~~-------~-------------------~~~l~~~i~~ln~d~~v~Gi~V~~Pl~ 77 (269)
.|.-.|..+ ||+ +.-++|+..+ + .+|+.++++..-- ..-+|+.
T Consensus 162 GKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG--~~~~I~~----- 234 (564)
T 1pj3_A 162 GKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYG--RNTLIQF----- 234 (564)
T ss_dssp HHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHC--TTCEEEE-----
T ss_pred hHHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcC--CCcEEee-----
Confidence 566656655 799 8888887632 2 4566666665321 2334665
Q ss_pred CCCCHHHHHhcCCccc-cccccccceecccccCCCCCccccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHH
Q 024306 78 QHLDEGKILDAVSLEK-DVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLL 156 (269)
Q Consensus 78 ~~~~~~~i~~~i~p~k-dvdg~~~~n~g~l~~g~~~~~~~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L 156 (269)
|.+...+.+..++-.+ ++-.+|.--.| | --.+..|++..++-.+.++++.++++.|+|.+ |.+++.+|
T Consensus 235 EDf~~~~af~il~ryr~~ipvFnDDiqG-------T---a~V~lAgllnAlki~gk~l~d~riv~~GAGaA-gigia~ll 303 (564)
T 1pj3_A 235 EDFGNHNAFRFLRKYREKYCTFNDDIQG-------T---AAVALAGLLAAQKVISKPISEHKILFLGAGEA-ALGIANLI 303 (564)
T ss_dssp CSCCHHHHHHHHHHHTTTSSEEEHHHHH-------H---HHHHHHHHHHHHHHHCCCGGGCCEEEECCSHH-HHHHHHHH
T ss_pred hhcCCccHHHHHHHhccCCCEeCCCCch-------H---HHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHH-HHHHHHHH
Confidence 5555544444333322 32222111111 1 11245788999999999999999999999998 99999998
Q ss_pred Hh----CCC-------EEEEEeCC--------C------------------CCHhhhcC--CCCEEEeccCCCCcccCCC
Q 024306 157 QR----HHA-------TVSIVHAL--------T------------------KNPEQITS--EADIVIAAAGVANLVRGSW 197 (269)
Q Consensus 157 ~~----~ga-------~Vti~~~~--------t------------------~~l~~~~~--~aDiVIsAtg~p~~i~~~~ 197 (269)
.. .|. ++++|+++ . .+|.+.++ .+|++|-..+.|+.+++++
T Consensus 304 ~~~m~~~Gl~~eeA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~ev 383 (564)
T 1pj3_A 304 VMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDV 383 (564)
T ss_dssp HHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHH
T ss_pred HHHHHHcCCChHHhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHH
Confidence 85 783 58999653 0 24777777 5999998888888999998
Q ss_pred cC------CCcEEEEeeecCC
Q 024306 198 LK------PGAVVLDVGTCPV 212 (269)
Q Consensus 198 ~~------~g~vViDv~~~~~ 212 (269)
++ +.-+|+=++ ||.
T Consensus 384 v~~Ma~~~~~PIIFaLS-NPt 403 (564)
T 1pj3_A 384 IRAMASINERPVIFALS-NPT 403 (564)
T ss_dssp HHHHHHHCSSCEEEECC-SSG
T ss_pred HHHHHhcCCCCEEEECC-CCC
Confidence 75 466777777 553
No 252
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=96.41 E-value=0.0032 Score=55.24 Aligned_cols=56 Identities=14% Similarity=0.182 Sum_probs=42.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----C---Hh------------hhcCCCCEEEeccCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----N---PE------------QITSEADIVIAAAGV 189 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----~---l~------------~~~~~aDiVIsAtg~ 189 (269)
+.+++|+|.|++|.+|+.++..|.++|++|+++.|... . +. .-+.+.|+||.+.+.
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~d~vi~~a~~ 79 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLSDVRLVYHLASH 79 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHTTEEEEEECCCC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccccCCEEEECCcc
Confidence 46799999999998999999999999999999987543 1 11 112268999988874
No 253
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.40 E-value=0.0012 Score=54.66 Aligned_cols=78 Identities=14% Similarity=0.199 Sum_probs=51.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHh----hhc--CCCCEEEeccC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE----QIT--SEADIVIAAAG 188 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~----~~~--~~aDiVIsAtg 188 (269)
-.|++|+|+|+++.+|+.+++.+...|++|+++.++. .+.. +.. ...|++|+++|
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 3789999999655569999999999999988876542 1111 112 24788888887
Q ss_pred CCCc-ccCCCcCCCcEEEEeeecC
Q 024306 189 VANL-VRGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 189 ~p~~-i~~~~~~~g~vViDv~~~~ 211 (269)
.+.+ -..+.++++-.++.++...
T Consensus 117 ~~~~~~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 117 GEAIQRGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp THHHHHHHHTEEEEEEEEECSCGG
T ss_pred hHHHHHHHHHhccCCEEEEEcCCC
Confidence 4221 1223566766777777543
No 254
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.40 E-value=0.0044 Score=56.34 Aligned_cols=55 Identities=24% Similarity=0.297 Sum_probs=44.0
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC--------------------------CCCHhhhcCCCCEEEeccC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL--------------------------TKNPEQITSEADIVIAAAG 188 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~--------------------------t~~l~~~~~~aDiVIsAtg 188 (269)
..+|+|||+|. +|.+++..|+..|. +|++..+. +.++.+.+++||+||.++|
T Consensus 9 ~~kI~VIGaG~-vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g 87 (331)
T 1pzg_A 9 RKKVAMIGSGM-IGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG 87 (331)
T ss_dssp CCEEEEECCSH-HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred CCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccC
Confidence 35899999966 59999999999886 88888543 1355567899999999998
Q ss_pred CCC
Q 024306 189 VAN 191 (269)
Q Consensus 189 ~p~ 191 (269)
.|.
T Consensus 88 ~p~ 90 (331)
T 1pzg_A 88 LTK 90 (331)
T ss_dssp CSS
T ss_pred CCC
Confidence 653
No 255
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=96.40 E-value=0.0031 Score=54.31 Aligned_cols=38 Identities=29% Similarity=0.284 Sum_probs=34.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|.
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999998888999999999999999998775
No 256
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=96.40 E-value=0.0047 Score=54.81 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=34.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..|+||.++|-|++.-+|+++|+.|+++||+|.++.|+
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 35899999999998878999999999999999999876
No 257
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.39 E-value=0.0049 Score=56.64 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=30.3
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 168 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~ 168 (269)
+++++|+|+|+||. |.+++..|+..|. ++++++.
T Consensus 116 L~~~~VlvvG~Ggl-Gs~va~~La~aGvg~i~lvD~ 150 (353)
T 3h5n_A 116 LKNAKVVILGCGGI-GNHVSVILATSGIGEIILIDN 150 (353)
T ss_dssp HHTCEEEEECCSHH-HHHHHHHHHHHTCSEEEEEEC
T ss_pred HhCCeEEEECCCHH-HHHHHHHHHhCCCCeEEEECC
Confidence 46899999999997 9999999999996 7999864
No 258
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=96.39 E-value=0.0026 Score=56.10 Aligned_cols=55 Identities=15% Similarity=0.192 Sum_probs=44.6
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------CCHhhhcC--CCCEEEeccCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------KNPEQITS--EADIVIAAAGV 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------~~l~~~~~--~aDiVIsAtg~ 189 (269)
++++|+|.|++|.+|+.++..|.++|++|+++.+.. .++.+.++ ..|+||...+.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih~a~~ 65 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAK 65 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCccCCccCHHHHHHHHHhcCCCEEEEcCee
Confidence 468999999999999999999999999988876542 12445666 89999988874
No 259
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=96.39 E-value=0.0039 Score=54.19 Aligned_cols=36 Identities=17% Similarity=0.068 Sum_probs=33.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|+++|.|+++-+|++++..|+++|++|.++.|.
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 689999999998888999999999999999999775
No 260
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=96.39 E-value=0.003 Score=54.63 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998888999999999999999998775
No 261
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=96.38 E-value=0.004 Score=52.94 Aligned_cols=36 Identities=14% Similarity=0.174 Sum_probs=32.8
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+||+++|.|+++-+|+.+++.|+++|++|+++.|+.
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCc
Confidence 689999999998899999999999999999987763
No 262
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=96.38 E-value=0.0033 Score=53.75 Aligned_cols=39 Identities=23% Similarity=0.361 Sum_probs=35.5
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..++++|+++|.|+++-+|+.++..|+++|++|.++.|+
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 456899999999998889999999999999999999775
No 263
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=96.38 E-value=0.007 Score=55.09 Aligned_cols=56 Identities=14% Similarity=0.050 Sum_probs=45.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcCCCCEEEeccCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~ 189 (269)
.++++|+|.|++|.+|+.++..|.++|++|+++.|... ++.+.++..|+||...+.
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~ 103 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 103 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence 46789999999998999999999999999999877531 134567789999988774
No 264
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=96.38 E-value=0.0032 Score=55.27 Aligned_cols=37 Identities=27% Similarity=0.196 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 62 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARD 62 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999999998765
No 265
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.38 E-value=0.0043 Score=54.04 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=51.3
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC---------------------HhhhcCCCCEEEeccCCCCc---c
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PEQITSEADIVIAAAGVANL---V 193 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~---------------------l~~~~~~aDiVIsAtg~p~~---i 193 (269)
+|.|||+|.+ |.+++..|.+.|.+|++++|+... ..+.++++|+||.+++.+.. +
T Consensus 2 ~i~iiG~G~~-G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v~ 80 (291)
T 1ks9_A 2 KITVLGCGAL-GQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAV 80 (291)
T ss_dssp EEEEECCSHH-HHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHH
T ss_pred eEEEECcCHH-HHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHhHHHHH
Confidence 6999999876 999999999999999999775321 12345679999999986432 1
Q ss_pred c--CCCcCCCcEEEEee
Q 024306 194 R--GSWLKPGAVVLDVG 208 (269)
Q Consensus 194 ~--~~~~~~g~vViDv~ 208 (269)
. ...++++++|+|+.
T Consensus 81 ~~l~~~l~~~~~vv~~~ 97 (291)
T 1ks9_A 81 KSLASTLPVTTPILLIH 97 (291)
T ss_dssp HHHHTTSCTTSCEEEEC
T ss_pred HHHHhhCCCCCEEEEec
Confidence 1 12456778888874
No 266
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.37 E-value=0.002 Score=58.60 Aligned_cols=77 Identities=16% Similarity=0.168 Sum_probs=54.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhc-----CCCCEEEeccCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQIT-----SEADIVIAAAGV 189 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~~-----~~aDiVIsAtg~ 189 (269)
-.|++|+|+|++|.+|..+++++...|++|+++.++. .++.+.+ ...|++|+++|.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 245 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA 245 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH
Confidence 3799999997656679999999999999988886542 2222222 258999999997
Q ss_pred CCc-ccCCCcCCCcEEEEeeec
Q 024306 190 ANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 190 p~~-i~~~~~~~g~vViDv~~~ 210 (269)
+.+ -..+.++++-.++.++..
T Consensus 246 ~~~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 246 AYFERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp GGHHHHHHTEEEEEEEEECCCT
T ss_pred HHHHHHHHHhccCCEEEEEEec
Confidence 533 223456777777777754
No 267
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=96.37 E-value=0.0025 Score=55.46 Aligned_cols=55 Identities=13% Similarity=0.166 Sum_probs=45.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC------HhhhcC--CCCEEEeccCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN------PEQITS--EADIVIAAAGV 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~------l~~~~~--~aDiVIsAtg~ 189 (269)
.-++|+|.|++|.+|+.++..|.++|++|+++.|..-+ +.+.++ ..|+||...+.
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 73 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAH 73 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 45889999999999999999999999999999876422 345566 68999988874
No 268
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=96.37 E-value=0.0038 Score=54.80 Aligned_cols=39 Identities=18% Similarity=0.293 Sum_probs=35.1
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..+++||+++|.|+++-+|++++..|+++|++|.++.++
T Consensus 22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 356899999999998888999999999999999998765
No 269
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=96.36 E-value=0.0055 Score=53.90 Aligned_cols=39 Identities=23% Similarity=0.331 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|+.
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence 357899999999988889999999999999999987764
No 270
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=96.36 E-value=0.0043 Score=53.99 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999999998765
No 271
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.36 E-value=0.0043 Score=54.37 Aligned_cols=52 Identities=19% Similarity=0.246 Sum_probs=43.9
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC--------HhhhcCCCCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------PEQITSEADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~--------l~~~~~~aDiVIsAtg~ 189 (269)
||+|.|++|.+|+.++..|.++|.+|+++.|+... ..+.+.++|.||+..+.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~l~~~d~vihla~~ 61 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPSCDAAVNLAGE 61 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTEEEHHHHHHHCCCSCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCeeecchhhHhhccCCCEEEEeccC
Confidence 69999999999999999999999999999886421 23567899999987763
No 272
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.36 E-value=0.0025 Score=57.17 Aligned_cols=88 Identities=15% Similarity=0.010 Sum_probs=58.1
Q ss_pred HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------CCHhhhc-----
Q 024306 123 CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------KNPEQIT----- 177 (269)
Q Consensus 123 ~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------------~~l~~~~----- 177 (269)
++..+.+..---.|++|+|.|+++.+|..+++.+..+|++|+++.++. .++.+.+
T Consensus 133 a~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~ 212 (333)
T 1v3u_A 133 AYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASP 212 (333)
T ss_dssp HHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCT
T ss_pred HHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhC
Confidence 344453332334799999999955569999999999999988886541 1222222
Q ss_pred CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeec
Q 024306 178 SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 178 ~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
...|++|+++|.+.+ -.-+.++++-.++-++..
T Consensus 213 ~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~ 246 (333)
T 1v3u_A 213 DGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAI 246 (333)
T ss_dssp TCEEEEEESSCHHHHHHHHTTEEEEEEEEECCCC
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCEEEEEecc
Confidence 247999999986432 122456777777777753
No 273
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.36 E-value=0.0042 Score=55.97 Aligned_cols=70 Identities=16% Similarity=0.189 Sum_probs=51.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------------------------CCHhhhcCCCCEEEecc
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-----------------------------~~l~~~~~~aDiVIsAt 187 (269)
.+|.|||+|.+ |..++..|.+.|.+|+++.++. .++.+.++++|+||.++
T Consensus 5 mki~iiG~G~~-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 83 (359)
T 1bg6_A 5 KTYAVLGLGNG-GHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 83 (359)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CeEEEECCCHH-HHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence 58999999876 9999999999999999997641 12334567899999999
Q ss_pred CCCCc---cc--CCCcCCCcEEEEe
Q 024306 188 GVANL---VR--GSWLKPGAVVLDV 207 (269)
Q Consensus 188 g~p~~---i~--~~~~~~g~vViDv 207 (269)
+.... +. ...++++++|+++
T Consensus 84 ~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 84 PAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred CchHHHHHHHHHHHhCCCCCEEEEc
Confidence 85431 11 1245677777776
No 274
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=96.36 E-value=0.0037 Score=54.91 Aligned_cols=37 Identities=16% Similarity=0.229 Sum_probs=34.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|.
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 38 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKS 38 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 4789999999998888999999999999999999775
No 275
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.35 E-value=0.0052 Score=48.86 Aligned_cols=54 Identities=17% Similarity=0.236 Sum_probs=42.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------------CHhh-hcCCCCEEEeccC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------------NPEQ-ITSEADIVIAAAG 188 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------------------~l~~-~~~~aDiVIsAtg 188 (269)
..++++|+|+|.. |+.++..|.+.|.+|+++.+..+ .+.+ .+.+||.||.+++
T Consensus 2 ~~~~vlI~G~G~v-G~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 2 RKDHFIVCGHSIL-AINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CCSCEEEECCSHH-HHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCCcEEEECCCHH-HHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence 3578999999775 99999999999999999977520 0122 2778999999988
Q ss_pred C
Q 024306 189 V 189 (269)
Q Consensus 189 ~ 189 (269)
.
T Consensus 81 ~ 81 (153)
T 1id1_A 81 N 81 (153)
T ss_dssp C
T ss_pred C
Confidence 5
No 276
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=96.35 E-value=0.0034 Score=54.85 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=34.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.+.
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999998888999999999999999998765
No 277
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=96.35 E-value=0.0056 Score=53.82 Aligned_cols=33 Identities=15% Similarity=0.073 Sum_probs=30.3
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
||+|+|.|++|.+|+.++..|+++|++|+++.|
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r 33 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIR 33 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEe
Confidence 689999999998999999999999999988765
No 278
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=96.35 E-value=0.0055 Score=53.59 Aligned_cols=39 Identities=26% Similarity=0.307 Sum_probs=34.4
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..+++||+++|.|+++-+|+++++.|+++|++|.++.++
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999999998888999999999999999888443
No 279
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=96.34 E-value=0.0033 Score=55.33 Aligned_cols=38 Identities=24% Similarity=0.263 Sum_probs=33.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|++++..|+++|++|.++.|.
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADID 62 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35899999999998888999999999999999999765
No 280
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.33 E-value=0.0071 Score=53.46 Aligned_cols=37 Identities=19% Similarity=0.048 Sum_probs=32.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++++|+|.|++|.+|+.++..|+++|++|+++.|.
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999998889999999999999999987653
No 281
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.33 E-value=0.043 Score=50.57 Aligned_cols=147 Identities=12% Similarity=0.050 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccc
Q 024306 22 SQTYVRNKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 99 (269)
Q Consensus 22 s~~y~~~~~~~~~~~Gi~~~~~~~~~~~--~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~ 99 (269)
|-.=--+-..++.++|.++.++.-.... .-|-+.+.++-|+.- +|+|.+--|-. ..+..+.... ++-
T Consensus 78 STRTR~SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~--~D~IviR~~~~------~~~~~lA~~s---~vP 146 (359)
T 2w37_A 78 STRTRSAFTTASIDLGAHPEYLGQNDIQLGKKESTSDTAKVLGSM--FDGIEFRGFKQ------SDAEILARDS---GVP 146 (359)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHHH--CSEEEEESSCH------HHHHHHHHHS---SSC
T ss_pred CccHHHHHHHHHHHcCCeEEEeCCccccCCCCcCHHHHHHHHHHh--cCEEEEecCCh------HHHHHHHHhC---CCC
Confidence 3333334667999999999988532210 124566777767663 68898887732 2222221111 234
Q ss_pred cceecccccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC--------
Q 024306 100 PLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL-------- 169 (269)
Q Consensus 100 ~~n~g~l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~-------- 169 (269)
.+|.| ++.+.||=+.+ ++.+.++.+ .++|.+++++|-+ ..|++.++..++..|++|+++...
T Consensus 147 VINa~-------~~~~HPtQaLaDl~Ti~E~~g-~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~ 218 (359)
T 2w37_A 147 VWNGL-------TDEWHPTQMLADFMTVKENFG-KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEET 218 (359)
T ss_dssp EEEEE-------CSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHH
T ss_pred EEcCC-------CCCCCccHHHHHHHHHHHHhC-CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHH
Confidence 55642 24466888887 455555554 7999999999997 567999999999999999999543
Q ss_pred -----------------CCCHhhhcCCCCEEEecc
Q 024306 170 -----------------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 -----------------t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+.+++||+|.+-+
T Consensus 219 ~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~ 253 (359)
T 2w37_A 219 QNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDV 253 (359)
T ss_dssp HHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcc
Confidence 235667899999999743
No 282
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=96.33 E-value=0.0019 Score=54.55 Aligned_cols=57 Identities=21% Similarity=0.209 Sum_probs=44.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------CHh---hhcCCCCEEEeccCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------NPE---QITSEADIVIAAAGV 189 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------~l~---~~~~~aDiVIsAtg~ 189 (269)
++++|+++|.|+++-+|+++++.|+++|++|.++.|... ++. +.+..-|++|+..|.
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~g~id~lv~nAg~ 69 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFETIGAFDHLIVTAGS 69 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGTCCTTCHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcccCCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 368999999999888899999999999999999876531 122 223467999988884
No 283
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.33 E-value=0.0052 Score=54.29 Aligned_cols=53 Identities=11% Similarity=0.153 Sum_probs=42.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-------------------------CHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-------------------------~l~~~~~~aDiVIsAtg~ 189 (269)
++|+|+|++|.+|+.++..|.++|++|+++.|... ++.+.++.+|+||++++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~ 89 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF 89 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence 68999999888899999999999999999877642 123556778999988774
No 284
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=96.32 E-value=0.0031 Score=54.59 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=35.2
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 45 (256)
T 3gaf_A 7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK 45 (256)
T ss_dssp TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 356899999999998888999999999999999998765
No 285
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.32 E-value=0.0037 Score=56.16 Aligned_cols=77 Identities=18% Similarity=0.163 Sum_probs=54.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHh----hhc--CCCCEEEeccC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE----QIT--SEADIVIAAAG 188 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~----~~~--~~aDiVIsAtg 188 (269)
-.|++|+|.|++|.+|..+++.+..+|++|+++.++. .+.. +.. ...|++|+++|
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g 223 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIG 223 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCc
Confidence 3789999999755569999999999999988886542 1111 112 25799999998
Q ss_pred CCCc-ccCCCcCCCcEEEEeeec
Q 024306 189 VANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 189 ~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
.+.+ -.-+.++++-.++.++..
T Consensus 224 ~~~~~~~~~~l~~~G~iv~~g~~ 246 (333)
T 1wly_A 224 KDTLQKSLDCLRPRGMCAAYGHA 246 (333)
T ss_dssp TTTHHHHHHTEEEEEEEEECCCT
T ss_pred HHHHHHHHHhhccCCEEEEEecC
Confidence 7322 123456777778888754
No 286
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=96.32 E-value=0.0035 Score=55.16 Aligned_cols=54 Identities=11% Similarity=0.183 Sum_probs=40.0
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------CCHhhhcC--CCCEEEeccCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITS--EADIVIAAAGV 189 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------~~l~~~~~--~aDiVIsAtg~ 189 (269)
+++|+|.|++|.+|+.++..|.++|++|+++.|.. .++.+.++ +.|+||...+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 70 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAE 70 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC--
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence 68999999988899999999999999999887542 12334454 37999988874
No 287
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.31 E-value=0.014 Score=53.13 Aligned_cols=163 Identities=11% Similarity=0.083 Sum_probs=107.9
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~--~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..++.++|.++.++.-.... .-|-+.+.++-|+.- +|+|.+-.|-. ..+..+.. -. .+-.+|.|
T Consensus 63 SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~~------~~~~~lA~--~~-~vPVINa~- 130 (321)
T 1oth_A 63 STETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSM--ADAVLARVYKQ------SDLDTLAK--EA-SIPIINGL- 130 (321)
T ss_dssp HHHHHHHHTTCEEEEEETTTSCBTTTBCHHHHHHHHHHH--CSEEEEECSCH------HHHHHHHH--HC-SSCEEESC-
T ss_pred HHHHHHHHcCCeEEEECCCcCcCCCCCCHHHHHHHHHHh--CCEEEEeCCCh------hHHHHHHH--hC-CCCEEcCC-
Confidence 3567899999999988643210 134566777777663 68899887732 22222211 11 23345632
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------- 170 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------- 170 (269)
.+.+.||=+.+ ++.+.++. ..++|.+|+++|-+..|++.++..+...|++|+++....
T Consensus 131 ------~~~~HPtQaLaDl~Ti~e~~-g~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~ 203 (321)
T 1oth_A 131 ------SDLYHPIQILADYLTLQEHY-SSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQY 203 (321)
T ss_dssp ------CSSCCHHHHHHHHHHHHHHH-SCCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHH
T ss_pred ------CCCCCcHHHHHHHHHHHHHh-CCcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHH
Confidence 24566998877 45555554 479999999999988889999999999999999996432
Q ss_pred -----------CCHhhhcCCCCEEEecc----CCC-----------Cc-ccCCCc---CCCcEEEEeee
Q 024306 171 -----------KNPEQITSEADIVIAAA----GVA-----------NL-VRGSWL---KPGAVVLDVGT 209 (269)
Q Consensus 171 -----------~~l~~~~~~aDiVIsAt----g~p-----------~~-i~~~~~---~~g~vViDv~~ 209 (269)
.++.+.+++||+|.+-+ |.. .+ ++.+.+ +++++|+=..-
T Consensus 204 a~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~lP 272 (321)
T 1oth_A 204 AKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLP 272 (321)
T ss_dssp HHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSC
T ss_pred HHHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCCC
Confidence 34567899999999844 311 12 455543 56777776654
No 288
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.31 E-value=0.0038 Score=57.00 Aligned_cols=90 Identities=16% Similarity=0.087 Sum_probs=58.0
Q ss_pred HHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhc----
Q 024306 121 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQIT---- 177 (269)
Q Consensus 121 ~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~~---- 177 (269)
..+...+.+..---.|++|+|+|++|.+|..+++++...|++|+.+.+.. .++.+.+
T Consensus 149 ~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~ 228 (362)
T 2c0c_A 149 TTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEY 228 (362)
T ss_dssp HHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhc
Confidence 33445554443334799999999755579999999999999988876541 1222222
Q ss_pred -CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeec
Q 024306 178 -SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 178 -~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
..+|+||+++|.+.+ -.-+.++++-.++.++..
T Consensus 229 ~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 229 PEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp TTCEEEEEECSCTHHHHHHHHHEEEEEEEEECCCG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhcCCEEEEEeCC
Confidence 247999988886321 122346666667777754
No 289
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.31 E-value=0.007 Score=54.94 Aligned_cols=54 Identities=28% Similarity=0.456 Sum_probs=43.2
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------------CCHhhhcCCCCEEEeccC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAG 188 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t--------------------------~~l~~~~~~aDiVIsAtg 188 (269)
.++|.|||+|. +|.+++..|+..|. +|++..+.. .++ +.+++||+||.++|
T Consensus 14 ~~kI~ViGaG~-vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 14 RKKISIIGAGQ-IGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 36899999966 59999999999997 888886542 234 67899999999998
Q ss_pred CCC
Q 024306 189 VAN 191 (269)
Q Consensus 189 ~p~ 191 (269)
.|.
T Consensus 92 ~p~ 94 (328)
T 2hjr_A 92 VPR 94 (328)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 290
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=96.31 E-value=0.0043 Score=54.94 Aligned_cols=36 Identities=22% Similarity=0.140 Sum_probs=31.9
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
++++|+|.|++|.+|+.++..|+++|++|+++.|..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCC
Confidence 578999999988899999999999999999987653
No 291
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=96.30 E-value=0.0063 Score=53.46 Aligned_cols=37 Identities=24% Similarity=0.343 Sum_probs=33.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.++++|+++|.|+++-+|++++..|+++|++|.++.+
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3678999999999888899999999999999999877
No 292
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=96.29 E-value=0.0043 Score=56.05 Aligned_cols=72 Identities=18% Similarity=0.207 Sum_probs=53.7
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCC-------CEEEEEeCCCC---------------------------------CHhh
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHH-------ATVSIVHALTK---------------------------------NPEQ 175 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~g-------a~Vti~~~~t~---------------------------------~l~~ 175 (269)
.++|.|||+|.+ |.+++..|++.| .+|++++++.. ++.+
T Consensus 8 ~mkI~iIG~G~m-G~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (354)
T 1x0v_A 8 SKKVCIVGSGNW-GSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ 86 (354)
T ss_dssp CEEEEEECCSHH-HHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred CCeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence 358999999886 999999999988 78999977543 1234
Q ss_pred hcCCCCEEEeccCCCC---ccc--CCCcCCCcEEEEee
Q 024306 176 ITSEADIVIAAAGVAN---LVR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 176 ~~~~aDiVIsAtg~p~---~i~--~~~~~~g~vViDv~ 208 (269)
.+++||+||.+++... .+. ...++++++|+++.
T Consensus 87 ~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~ 124 (354)
T 1x0v_A 87 AAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLI 124 (354)
T ss_dssp HHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECC
T ss_pred HHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEEC
Confidence 4678999999998532 111 23467889999985
No 293
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=96.29 E-value=0.0033 Score=54.20 Aligned_cols=37 Identities=32% Similarity=0.312 Sum_probs=30.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||.++|.|+++-+|+++++.|+++|++|.++.+.
T Consensus 6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 42 (257)
T 3tl3_A 6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR 42 (257)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc
Confidence 5789999999998888999999999999999998765
No 294
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=96.29 E-value=0.0036 Score=56.64 Aligned_cols=58 Identities=14% Similarity=0.114 Sum_probs=47.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhC-CC-EEEEEeCCC-------------------------CCHhhhcCCCCEEEe
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRH-HA-TVSIVHALT-------------------------KNPEQITSEADIVIA 185 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~-ga-~Vti~~~~t-------------------------~~l~~~~~~aDiVIs 185 (269)
.+++|+|+|.|++|.+|+.++..|+++ |+ +|+++.|.. ..+.+.++..|+||.
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 368999999999998999999999999 97 899987651 123456778999998
Q ss_pred ccCCC
Q 024306 186 AAGVA 190 (269)
Q Consensus 186 Atg~p 190 (269)
+++..
T Consensus 98 ~Aa~~ 102 (344)
T 2gn4_A 98 AAALK 102 (344)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 88743
No 295
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=96.29 E-value=0.0094 Score=50.36 Aligned_cols=35 Identities=23% Similarity=0.163 Sum_probs=31.8
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999998888999999999999999998775
No 296
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.29 E-value=0.0041 Score=54.42 Aligned_cols=54 Identities=13% Similarity=0.180 Sum_probs=43.2
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------------------CHhhhcCCCCEEEe
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------------------NPEQITSEADIVIA 185 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------------------------~l~~~~~~aDiVIs 185 (269)
.++|+|+|++|.+|+.++..|.++|.+|+++.|... ++.+.++.+|+||+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 478999999888899999999999999998877521 12345677899998
Q ss_pred ccCC
Q 024306 186 AAGV 189 (269)
Q Consensus 186 Atg~ 189 (269)
+++.
T Consensus 84 ~a~~ 87 (308)
T 1qyc_A 84 TVGS 87 (308)
T ss_dssp CCCG
T ss_pred CCcc
Confidence 8774
No 297
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=96.28 E-value=0.0039 Score=53.95 Aligned_cols=38 Identities=26% Similarity=0.226 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 45789999999998888999999999999999998775
No 298
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=96.28 E-value=0.005 Score=53.76 Aligned_cols=38 Identities=26% Similarity=0.273 Sum_probs=34.2
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.+.
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~ 61 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYAS 61 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999999998888999999999999999888663
No 299
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=96.26 E-value=0.03 Score=51.60 Aligned_cols=142 Identities=13% Similarity=0.069 Sum_probs=94.9
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC--CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFADGC--TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~--~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..+++++|.++.+..-.... .-|-+.+.++-|..- +|+|.+--|-. ..++.+..... + |++.
T Consensus 87 SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~--~D~IviR~~~~------~~~~~la~~s~---v-PVIN-- 152 (358)
T 4h31_A 87 AFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRM--YDGIQYRGFGQ------AIVEELGAFAG---V-PVWN-- 152 (358)
T ss_dssp HHHHHHHHTTCEEEEECSSSSCBTTTBCHHHHHHHHHHH--CSEEEEECSCH------HHHHHHHHHSS---S-CEEE--
T ss_pred HHHHHHHHcCCeEEECCcccccccCccchhHHHHHhhcc--CceeEecccch------hHHHHhhhhcc---C-ceEC--
Confidence 3566899999999876543211 235577777777774 78998876622 22333222111 1 3332
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhC-CCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCC-------------
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSG-VEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL------------- 169 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~-~~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~------------- 169 (269)
|. .+...||=+.+ ++.+.++.+ ..++|.+|+++|-+ ..|++..+.++...|++|+++...
T Consensus 153 ---G~-g~~~HPtQaL~Dl~Ti~e~~~~~~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~ 228 (358)
T 4h31_A 153 ---GL-TDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQ 228 (358)
T ss_dssp ---SC-CSSCCHHHHHHHHHHHHHTTTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHH
T ss_pred ---CC-CcCCCchHHHHHHHHHHHHhcCCCcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHH
Confidence 21 34556887777 444455444 37999999999965 457999999999999999999643
Q ss_pred ------------CCCHhhhcCCCCEEEecc
Q 024306 170 ------------TKNPEQITSEADIVIAAA 187 (269)
Q Consensus 170 ------------t~~l~~~~~~aDiVIsAt 187 (269)
+.++.+.+++||+|.+-+
T Consensus 229 ~~~~~~g~~v~~~~d~~eav~~aDvvyt~~ 258 (358)
T 4h31_A 229 AIAKQTGGKITLTENVAEGVQGCDFLYTDV 258 (358)
T ss_dssp HHHHHHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred HHHHHcCCcceeccCHHHHhccCcEEEEEE
Confidence 246778999999999543
No 300
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=96.26 E-value=0.0047 Score=53.19 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=32.3
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.-+|+++|.|+++-+|+.+++.|+++|++|.++.|+.
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3479999999988889999999999999999998764
No 301
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.26 E-value=0.0062 Score=52.79 Aligned_cols=53 Identities=9% Similarity=-0.007 Sum_probs=41.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhh----------------cCCCCEEEeccCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQI----------------TSEADIVIAAAGV 189 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~~~----------------~~~aDiVIsAtg~ 189 (269)
.++|+|.|+ |.+|+.++..|.++|.+|+++.|........ +.++|+||.+++.
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~ 73 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAP 73 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCc
Confidence 378999998 6679999999999999999998874322110 6778999988773
No 302
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=96.25 E-value=0.005 Score=54.64 Aligned_cols=38 Identities=26% Similarity=0.330 Sum_probs=34.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 45899999999998888999999999999999998775
No 303
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.25 E-value=0.0051 Score=56.40 Aligned_cols=57 Identities=9% Similarity=0.293 Sum_probs=43.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCC-----------------------CCCHhhhcCCCCEEEeccC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHAL-----------------------TKNPEQITSEADIVIAAAG 188 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~-----------------------t~~l~~~~~~aDiVIsAtg 188 (269)
+.+++|+|||++|.||.++++.|+.+|. +|.+++.. +.++.+.+++||+||.+.|
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 3578999999855569999999998883 68888543 1356678999999999988
Q ss_pred CC
Q 024306 189 VA 190 (269)
Q Consensus 189 ~p 190 (269)
.|
T Consensus 86 ~p 87 (343)
T 3fi9_A 86 AP 87 (343)
T ss_dssp --
T ss_pred CC
Confidence 65
No 304
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=96.24 E-value=0.0059 Score=52.95 Aligned_cols=38 Identities=13% Similarity=0.088 Sum_probs=34.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..++||+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 34789999999998888999999999999999998775
No 305
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.23 E-value=0.009 Score=53.97 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=63.6
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhC-CCEEEEEeCCC-------------------CC---
Q 024306 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALT-------------------KN--- 172 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~-ga~Vti~~~~t-------------------~~--- 172 (269)
+||....++..+++.++ -.|++|+|+|+|+.+|..+++++... |++|+++.++. .+
T Consensus 152 l~~~~~ta~~~l~~~~~-~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 230 (347)
T 1jvb_A 152 LTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLA 230 (347)
T ss_dssp GGTHHHHHHHHHHHTTC-CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHH
T ss_pred chhhHHHHHHHHHhcCC-CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHH
Confidence 34544445566655333 37899999999966799999999999 99988876541 12
Q ss_pred -Hhhhc--CCCCEEEeccCCCCcc--cCCCcCCCcEEEEeeec
Q 024306 173 -PEQIT--SEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 173 -l~~~~--~~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
+.+.. ...|++|+++|.+..+ .-+.++++-.++.++..
T Consensus 231 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 231 EIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp HHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSS
T ss_pred HHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCC
Confidence 12233 3589999999975332 23457777777777754
No 306
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=96.22 E-value=0.0035 Score=54.91 Aligned_cols=38 Identities=24% Similarity=0.203 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|++++..|+++|++|.++.|.
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~ 59 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTD 59 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999998888999999999999999988664
No 307
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.20 E-value=0.0066 Score=57.01 Aligned_cols=73 Identities=14% Similarity=0.152 Sum_probs=53.6
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------------CCHhhhcCCCCEE
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADIV 183 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------------------------~~l~~~~~~aDiV 183 (269)
+|.|||.|.+ |.+++..|++.|.+|++++++. .++.+.+++||+|
T Consensus 2 kI~VIG~G~v-G~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 2 RISIFGLGYV-GAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp EEEEECCSTT-HHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred EEEEECCCHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 6899999886 9999999999999999997641 1233456789999
Q ss_pred EeccCCCCc---------cc------CCCcCC---CcEEEEeeecC
Q 024306 184 IAAAGVANL---------VR------GSWLKP---GAVVLDVGTCP 211 (269)
Q Consensus 184 IsAtg~p~~---------i~------~~~~~~---g~vViDv~~~~ 211 (269)
|.+++.|.- +. ...+++ +++|++....+
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~ 126 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVL 126 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCC
T ss_pred EEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcC
Confidence 999986541 11 113567 88898875444
No 308
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.20 E-value=0.019 Score=54.36 Aligned_cols=84 Identities=21% Similarity=0.302 Sum_probs=63.4
Q ss_pred HHHHHHHhCCCCccceEEEEcCC---------cccHHHHHHHHHhCCCEEEEEeCCC---------------CCHhhhcC
Q 024306 123 CIELLIRSGVEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQITS 178 (269)
Q Consensus 123 ~~~~l~~~~~~l~gk~v~ViG~g---------g~vg~~~a~~L~~~ga~Vti~~~~t---------------~~l~~~~~ 178 (269)
+++.+++...+++|++|+|+|-. .+-+..++..|.++|++|.+..... .++.+.++
T Consensus 320 vv~~l~~~~~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~~ 399 (444)
T 3vtf_A 320 AVQLLEERLGGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALLD 399 (444)
T ss_dssp HHHHHHHHHTCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHHH
T ss_pred HHHHHHHHccccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHHh
Confidence 45556666667899999999943 2226789999999999999997542 35667889
Q ss_pred CCCEEEeccCCCCcccCCCcCCCcEEEEee
Q 024306 179 EADIVIAAAGVANLVRGSWLKPGAVVLDVG 208 (269)
Q Consensus 179 ~aDiVIsAtg~p~~i~~~~~~~g~vViDv~ 208 (269)
+||.||-+|..+.|-..+| ++.+|+|..
T Consensus 400 ~aDavvi~t~h~ef~~ld~--~~~vv~D~R 427 (444)
T 3vtf_A 400 QVEGVIIATAWPQYEGLDY--RGKVVVDGR 427 (444)
T ss_dssp HCSEEEECSCCGGGGGSCC--TTCEEEESS
T ss_pred CCCEEEEccCCHHHhCCCc--CCCEEEECC
Confidence 9999999999877644444 467899954
No 309
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=96.19 E-value=0.006 Score=53.93 Aligned_cols=52 Identities=19% Similarity=0.205 Sum_probs=44.3
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC---EEEEEeCCC---------------CCHhhhcCCCCEEEeccC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---------------KNPEQITSEADIVIAAAG 188 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga---~Vti~~~~t---------------~~l~~~~~~aDiVIsAtg 188 (269)
.++|.|||+|.+ |.+++..|.+.|. +|++++++. .+..+.++++|+||.+++
T Consensus 3 ~~~I~iIG~G~m-G~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~ 72 (280)
T 3tri_A 3 TSNITFIGGGNM-ARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVK 72 (280)
T ss_dssp CSCEEEESCSHH-HHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSC
T ss_pred CCEEEEEcccHH-HHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeC
Confidence 468999999887 9999999999997 799998763 245677889999999995
No 310
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=96.19 E-value=0.0096 Score=52.15 Aligned_cols=53 Identities=21% Similarity=0.138 Sum_probs=41.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------------CHhhhcCCCCEEEeccCCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------------~l~~~~~~aDiVIsAtg~p 190 (269)
++|+|.|++|.+|+.++..|.++|++|+++.|... ++.+.++. |+||+..+.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~ 73 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAANP 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCSSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCCCC
Confidence 47999999888999999999999999999876431 12233444 9999887743
No 311
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=96.19 E-value=0.0036 Score=57.40 Aligned_cols=71 Identities=13% Similarity=0.155 Sum_probs=52.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC-------CEEEEEeCCCC---------------------------------CHhhh
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHH-------ATVSIVHALTK---------------------------------NPEQI 176 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~g-------a~Vti~~~~t~---------------------------------~l~~~ 176 (269)
++|.|||+|.+ |.+++..|++.| .+|++++++.. ++.+.
T Consensus 22 ~kI~iIGaG~m-G~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 22 LKISILGSGNW-ASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp BCEEEECCSHH-HHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CEEEEECcCHH-HHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 47999999886 999999999988 88999987543 12244
Q ss_pred cCCCCEEEeccCCCC---c---ccCC---CcCCCcEEEEee
Q 024306 177 TSEADIVIAAAGVAN---L---VRGS---WLKPGAVVLDVG 208 (269)
Q Consensus 177 ~~~aDiVIsAtg~p~---~---i~~~---~~~~g~vViDv~ 208 (269)
+++||+||.+++... . +.+. .++++++|+++.
T Consensus 101 ~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~ 141 (375)
T 1yj8_A 101 INDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLT 141 (375)
T ss_dssp HTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECC
T ss_pred HcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeC
Confidence 678999999998422 1 2220 577888998875
No 312
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=96.18 E-value=0.0088 Score=52.49 Aligned_cols=37 Identities=19% Similarity=0.174 Sum_probs=33.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.+++||.++|.|+++-+|++++..|+++|++|.++.+
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 4578999999999888899999999999999998875
No 313
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=96.18 E-value=0.0044 Score=52.25 Aligned_cols=54 Identities=22% Similarity=0.303 Sum_probs=42.6
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------CHhhhcC------CCCEEEeccCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQITS------EADIVIAAAGV 189 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------~l~~~~~------~aDiVIsAtg~ 189 (269)
+|+++|.|+++-+|+.++..|+++|++|.++.|... ++.+.++ ..|++|+..|.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~ 76 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV 76 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccc
Confidence 689999999988999999999999999999877531 1223333 57999988874
No 314
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.18 E-value=0.0084 Score=54.28 Aligned_cols=52 Identities=21% Similarity=0.333 Sum_probs=41.9
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------------CCHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t--------------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
++|+|||+|. +|.+++..|+..|. +|.++.... .++ +.+++||+||.++|.
T Consensus 5 ~kI~VIGaG~-vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~ 82 (322)
T 1t2d_A 5 AKIVLVGSGM-IGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGF 82 (322)
T ss_dssp CEEEEECCSH-HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSC
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 5899999966 59999999999996 887775431 244 678999999999986
Q ss_pred C
Q 024306 190 A 190 (269)
Q Consensus 190 p 190 (269)
|
T Consensus 83 p 83 (322)
T 1t2d_A 83 T 83 (322)
T ss_dssp S
T ss_pred C
Confidence 5
No 315
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=96.17 E-value=0.0053 Score=53.48 Aligned_cols=37 Identities=22% Similarity=-0.024 Sum_probs=32.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++|+++|.|+++-+|++++..|+++|++|.++.|..
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 39 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT 39 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999988889999999999999999987763
No 316
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.16 E-value=0.0043 Score=48.78 Aligned_cols=53 Identities=13% Similarity=0.132 Sum_probs=41.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------C---Hhh-hcCCCCEEEeccCCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------N---PEQ-ITSEADIVIAAAGVA 190 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------------~---l~~-~~~~aDiVIsAtg~p 190 (269)
.+++|+|.|.. |+.++..|.++|..|+++.+... + +.+ .+.+||+||.+++..
T Consensus 8 ~~viIiG~G~~-G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 8 NHALLVGYGRV-GSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp SCEEEECCSHH-HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred CCEEEECcCHH-HHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 57999999886 99999999999999999976521 1 111 257899999998853
No 317
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.16 E-value=0.0057 Score=58.25 Aligned_cols=71 Identities=11% Similarity=0.136 Sum_probs=53.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------------------CHhhhcCCCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------------NPEQITSEAD 181 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------------------------~l~~~~~~aD 181 (269)
++|.|||+|-+ |.++|..|++.|.+|++.+++.. ++ +.+++||
T Consensus 55 ~kVaVIGaG~M-G~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl-~al~~aD 132 (460)
T 3k6j_A 55 NSVAIIGGGTM-GKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF-HKLSNCD 132 (460)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-GGCTTCS
T ss_pred CEEEEECCCHH-HHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-HHHccCC
Confidence 68999999886 99999999999999999976521 22 3578999
Q ss_pred EEEeccCCC-C----ccc--CCCcCCCcEEEEeee
Q 024306 182 IVIAAAGVA-N----LVR--GSWLKPGAVVLDVGT 209 (269)
Q Consensus 182 iVIsAtg~p-~----~i~--~~~~~~g~vViDv~~ 209 (269)
+||.|++.. . ++. ...+++++++++...
T Consensus 133 lVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTS 167 (460)
T 3k6j_A 133 LIVESVIEDMKLKKELFANLENICKSTCIFGTNTS 167 (460)
T ss_dssp EEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCS
T ss_pred EEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCC
Confidence 999999842 1 111 234678888876543
No 318
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.16 E-value=0.0066 Score=54.62 Aligned_cols=93 Identities=16% Similarity=0.109 Sum_probs=61.2
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhh
Q 024306 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQI 176 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~ 176 (269)
+||....+...++..+ .-.|++|+|+|+|+ +|..+++++..+|++|+.+.++. .++.+.
T Consensus 148 l~~~~~ta~~~l~~~~-~~~g~~VlV~GaG~-vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~ 225 (340)
T 3s2e_A 148 ILCAGVTVYKGLKVTD-TRPGQWVVISGIGG-LGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAW 225 (340)
T ss_dssp GGTHHHHHHHHHHTTT-CCTTSEEEEECCST-THHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHH
T ss_pred ccchhHHHHHHHHHcC-CCCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHH
Confidence 3444444566664332 24799999999977 59999999999999988875531 122222
Q ss_pred c----CCCCEEEeccCCCCcc--cCCCcCCCcEEEEeeec
Q 024306 177 T----SEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 177 ~----~~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
+ ..+|+||.++|.+..+ .-+.++++-.++.++..
T Consensus 226 ~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 226 LQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp HHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCC
T ss_pred HHHhCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCC
Confidence 2 2578888888765432 22356777777777754
No 319
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=96.15 E-value=0.0071 Score=54.30 Aligned_cols=57 Identities=18% Similarity=0.302 Sum_probs=41.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCCCC--------------------HhhhcC-----CCCEEEec
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTKN--------------------PEQITS-----EADIVIAA 186 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t~~--------------------l~~~~~-----~aDiVIsA 186 (269)
++++++|+|.|++|.+|+.++..|.++| ++|+++.|.... +.+.++ ..|+||..
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~ 122 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHE 122 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence 3578999999999989999999999999 899998765321 123344 58999988
Q ss_pred cCC
Q 024306 187 AGV 189 (269)
Q Consensus 187 tg~ 189 (269)
.+.
T Consensus 123 A~~ 125 (357)
T 2x6t_A 123 GAC 125 (357)
T ss_dssp CSC
T ss_pred Ccc
Confidence 874
No 320
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=96.15 E-value=0.0058 Score=53.18 Aligned_cols=38 Identities=29% Similarity=0.276 Sum_probs=33.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.++
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~ 51 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYAN 51 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 35899999999998888999999999999999887543
No 321
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.14 E-value=0.0099 Score=54.03 Aligned_cols=55 Identities=24% Similarity=0.295 Sum_probs=43.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------------CCHhhhcCCCCEEEec
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAA 186 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t--------------------------~~l~~~~~~aDiVIsA 186 (269)
.+..+|.|||+|.+ |.+++..|+..|. +|++++... .+ .+.+++||+||.+
T Consensus 5 m~~~kI~viGaG~v-G~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d-~~a~~~aDiVIia 82 (324)
T 3gvi_A 5 MARNKIALIGSGMI-GGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND-YAAIEGADVVIVT 82 (324)
T ss_dssp -CCCEEEEECCSHH-HHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS-GGGGTTCSEEEEC
T ss_pred CcCCEEEEECCCHH-HHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC-HHHHCCCCEEEEc
Confidence 35678999999765 9999999999987 888885431 22 3678999999999
Q ss_pred cCCC
Q 024306 187 AGVA 190 (269)
Q Consensus 187 tg~p 190 (269)
+|.|
T Consensus 83 ag~p 86 (324)
T 3gvi_A 83 AGVP 86 (324)
T ss_dssp CSCC
T ss_pred cCcC
Confidence 9865
No 322
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=96.14 E-value=0.0057 Score=53.85 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=32.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++++|.++|.|+++-+|++++..|+++|++|.++.|.
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998888999999999999999999775
No 323
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.14 E-value=0.0043 Score=53.99 Aligned_cols=53 Identities=13% Similarity=0.137 Sum_probs=41.3
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------CHhhhcCC-CCEEEeccC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------NPEQITSE-ADIVIAAAG 188 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------~l~~~~~~-aDiVIsAtg 188 (269)
++++|+|.|+ |.+|+.++..|.++|.+|+++.|... .+.+.++. +|+||...+
T Consensus 2 ~~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECC-SHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 4678999997 55699999999999999999987631 12344555 999997775
No 324
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=96.13 E-value=0.0096 Score=50.36 Aligned_cols=53 Identities=21% Similarity=0.212 Sum_probs=42.4
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC--------------Hhhhc----CCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN--------------PEQIT----SEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~--------------l~~~~----~~aDiVIsAtg~ 189 (269)
|+++|.|++|-+|+.++..|+++|++|+++.|.... +.+.+ ...|+||+..|.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~ 72 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV 72 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence 579999998888999999999999999999876421 22333 378999988874
No 325
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=96.13 E-value=0.007 Score=53.54 Aligned_cols=38 Identities=13% Similarity=0.152 Sum_probs=33.4
Q ss_pred CCCccceEEEEcCCcc--cHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNI--VGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~--vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++. +|+++++.|+++|++|.++.|.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~ 66 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG 66 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 3589999999999755 6999999999999999988765
No 326
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=96.13 E-value=0.0023 Score=58.05 Aligned_cols=53 Identities=26% Similarity=0.308 Sum_probs=45.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeC-CC-CCHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA-LT-KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~-~t-~~l~~~~~~aDiVIsAtg~ 189 (269)
.+|+|.|++|.+|+.++..|.++|. +|+.+.+ .. .++.+.++++|+||...+.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~ 56 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGV 56 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHHHCSEEEECCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhccCCEEEECCcC
Confidence 3799999999999999999999998 9999988 43 3466778899999988874
No 327
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=96.12 E-value=0.005 Score=53.87 Aligned_cols=38 Identities=26% Similarity=0.204 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||.++|.|+++-+|++++..|+++|++|.++.|.
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 61 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATT 61 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999998888999999999999999998765
No 328
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=96.11 E-value=0.0049 Score=59.22 Aligned_cols=74 Identities=22% Similarity=0.156 Sum_probs=55.1
Q ss_pred Ccc-ceEEEEcCCcccHHHHHHHHHhC------CCEEEEEeCCC-------------------CCHhhhcCCCCEEEecc
Q 024306 134 IMG-KNAVVIGRSNIVGLPTSLLLQRH------HATVSIVHALT-------------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 134 l~g-k~v~ViG~gg~vg~~~a~~L~~~------ga~Vti~~~~t-------------------~~l~~~~~~aDiVIsAt 187 (269)
++| |+|.|||.|.+ |.+++..|.+. |.+|++..+.. .++.+.+++||+||.++
T Consensus 51 L~GiKkIgIIGlGsM-G~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaV 129 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLI 129 (525)
T ss_dssp TTTCSEEEEECCTTH-HHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECS
T ss_pred hcCCCEEEEEeEhHH-HHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECC
Confidence 688 99999999987 99999999998 88888775542 13456788999999999
Q ss_pred CC---CCccc--CCCcCCCcEEEEee
Q 024306 188 GV---ANLVR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 188 g~---p~~i~--~~~~~~g~vViDv~ 208 (269)
+- +..+. ...+++|++|+...
T Consensus 130 P~~~~~eVl~eI~p~LK~GaILs~Aa 155 (525)
T 3fr7_A 130 SDAAQADNYEKIFSHMKPNSILGLSH 155 (525)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEESS
T ss_pred ChHHHHHHHHHHHHhcCCCCeEEEeC
Confidence 83 22232 12367888765543
No 329
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=96.11 E-value=0.0032 Score=60.12 Aligned_cols=72 Identities=17% Similarity=0.268 Sum_probs=54.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhhc---CCCCEEEeccCCCCc--
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQIT---SEADIVIAAAGVANL-- 192 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~~---~~aDiVIsAtg~p~~-- 192 (269)
.+|.|||.|.+ |.+++..|++.|.+|++++|+. .++.+.+ +++|+||.+++.+..
T Consensus 3 m~IgvIG~G~m-G~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~ 81 (482)
T 2pgd_A 3 ADIALIGLAVM-GQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (482)
T ss_dssp BSEEEECCSHH-HHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CeEEEEChHHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHH
Confidence 47999999886 9999999999999999998753 1233443 489999999987521
Q ss_pred --cc--CCCcCCCcEEEEeee
Q 024306 193 --VR--GSWLKPGAVVLDVGT 209 (269)
Q Consensus 193 --i~--~~~~~~g~vViDv~~ 209 (269)
+. ...++++.+|||++.
T Consensus 82 ~vl~~l~~~l~~g~iII~~s~ 102 (482)
T 2pgd_A 82 NFIEKLVPLLDIGDIIIDGGN 102 (482)
T ss_dssp HHHHHHHHHCCTTCEEEECSC
T ss_pred HHHHHHHhhcCCCCEEEECCC
Confidence 21 124678889999863
No 330
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=96.11 E-value=0.0042 Score=54.22 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=32.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++.+|+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 45789999999998888999999999999999999775
No 331
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=96.11 E-value=0.0034 Score=54.51 Aligned_cols=52 Identities=13% Similarity=0.183 Sum_probs=43.3
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC------HhhhcC--CCCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN------PEQITS--EADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~------l~~~~~--~aDiVIsAtg~ 189 (269)
+|+|.|++|.+|+.++..|.++|++|+++.|..-+ +.+.++ ..|+||+..+.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~ 66 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 66 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 89999998889999999999999999999886433 344555 58999988874
No 332
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=96.10 E-value=0.0078 Score=51.74 Aligned_cols=39 Identities=10% Similarity=-0.043 Sum_probs=33.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCC---CEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~g---a~Vti~~~~t 170 (269)
.++++|+++|.|+++-+|+.+++.|+++| ++|+++.|..
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~ 58 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNR 58 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCT
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecCh
Confidence 35789999999999999999999999999 8999987763
No 333
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=96.10 E-value=0.0042 Score=54.71 Aligned_cols=37 Identities=32% Similarity=0.431 Sum_probs=33.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 5789999999998888999999999999999988765
No 334
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=96.09 E-value=0.0053 Score=53.70 Aligned_cols=36 Identities=19% Similarity=0.142 Sum_probs=32.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 478999999998888999999999999999998775
No 335
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.09 E-value=0.008 Score=53.95 Aligned_cols=75 Identities=20% Similarity=0.290 Sum_probs=50.6
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------------CCHhhhcCCCCEE
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------KNPEQITSEADIV 183 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------------------~~l~~~~~~aDiV 183 (269)
+++...++|+|||+|.. |.+++..|++.|.+|+++ ++. .+. +.+..+|+|
T Consensus 14 ~~~~~~~kI~IiGaGa~-G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~v 90 (318)
T 3hwr_A 14 NLYFQGMKVAIMGAGAV-GCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLV 90 (318)
T ss_dssp ------CEEEEESCSHH-HHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEE
T ss_pred hhhccCCcEEEECcCHH-HHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEE
Confidence 34556789999999886 999999999999999998 442 112 235789999
Q ss_pred EeccCCCCc---cc--CCCcCCCcEEEEee
Q 024306 184 IAAAGVANL---VR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 184 IsAtg~p~~---i~--~~~~~~g~vViDv~ 208 (269)
|.+++.... +. ...++++++|+.+.
T Consensus 91 ilavk~~~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 91 LFCVKSTDTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp EECCCGGGHHHHHHHHTTTSCTTCEEEEEC
T ss_pred EEEcccccHHHHHHHHHHhcCCCCEEEEeC
Confidence 999986431 11 23456777777653
No 336
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=96.09 E-value=0.0095 Score=50.89 Aligned_cols=53 Identities=15% Similarity=0.177 Sum_probs=42.1
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC--------------CHhhhcC----CCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NPEQITS----EADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~--------------~l~~~~~----~aDiVIsAtg~ 189 (269)
|+++|.|+++-+|+.+++.|+++|++|+++.|+.. ++.+.++ .-|++|+..|.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~ 72 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGL 72 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHhCCCCCEEEECCCC
Confidence 57999999988999999999999999999987642 1223343 34999988884
No 337
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.08 E-value=0.0085 Score=53.81 Aligned_cols=54 Identities=20% Similarity=0.322 Sum_probs=42.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------------CCHhhhcCCCCEEEeccC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAG 188 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t--------------------------~~l~~~~~~aDiVIsAtg 188 (269)
.++|.|||+|.+ |.+++..|+..|. +|+++++.. .++ +.+++||+||.++|
T Consensus 4 ~~kI~VIGaG~~-G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg 81 (317)
T 2ewd_A 4 RRKIAVIGSGQI-GGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITAS 81 (317)
T ss_dssp CCEEEEECCSHH-HHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred CCEEEEECCCHH-HHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 468999999765 9999999999997 899886542 123 46789999999998
Q ss_pred CCC
Q 024306 189 VAN 191 (269)
Q Consensus 189 ~p~ 191 (269)
.|.
T Consensus 82 ~p~ 84 (317)
T 2ewd_A 82 IPG 84 (317)
T ss_dssp CSS
T ss_pred CCC
Confidence 543
No 338
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=96.08 E-value=0.0051 Score=53.11 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=34.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.+++||+++|.|+++-+|++++..|+++|++|.++.|+.
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357899999999998889999999999999999998763
No 339
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.07 E-value=0.0071 Score=53.01 Aligned_cols=54 Identities=11% Similarity=0.105 Sum_probs=43.5
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------------------------CHhhhcCCCCEEEec
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------NPEQITSEADIVIAA 186 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------------------------~l~~~~~~aDiVIsA 186 (269)
.++|+|+|++|.+|+.++..|.++|.+|+++.|... ++.+.++.+|+||+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 478999999888899999999999999999877521 133566778999988
Q ss_pred cCC
Q 024306 187 AGV 189 (269)
Q Consensus 187 tg~ 189 (269)
++.
T Consensus 84 a~~ 86 (313)
T 1qyd_A 84 LAG 86 (313)
T ss_dssp CCC
T ss_pred Ccc
Confidence 774
No 340
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=96.06 E-value=0.0088 Score=54.70 Aligned_cols=77 Identities=10% Similarity=0.012 Sum_probs=53.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC------------------CCCHhhhc-----CCCCEEEeccCCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL------------------TKNPEQIT-----SEADIVIAAAGVA 190 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~------------------t~~l~~~~-----~~aDiVIsAtg~p 190 (269)
-.|++|+|+|++|.+|..+++++...|++|+...+. ..++.+.+ ..+|++|.++|.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~ 242 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV 242 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCch
Confidence 579999999997777999999999999986655321 12222222 2389999999975
Q ss_pred Cccc--CCCc-CCCcEEEEeeec
Q 024306 191 NLVR--GSWL-KPGAVVLDVGTC 210 (269)
Q Consensus 191 ~~i~--~~~~-~~g~vViDv~~~ 210 (269)
..+. -+.+ +++-.++.++..
T Consensus 243 ~~~~~~~~~l~~~~G~iv~~g~~ 265 (371)
T 3gqv_A 243 ESTTFCFAAIGRAGGHYVSLNPF 265 (371)
T ss_dssp HHHHHHHHHSCTTCEEEEESSCC
T ss_pred HHHHHHHHHhhcCCCEEEEEecC
Confidence 4332 2346 577777788753
No 341
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=96.05 E-value=0.0086 Score=52.99 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=32.9
Q ss_pred CCCccceEEEEcCCc--ccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSN--IVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg--~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++ -+|+++++.|+++|++|.++.+.
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 457899999999973 35999999999999999998765
No 342
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.04 E-value=0.0029 Score=57.54 Aligned_cols=87 Identities=25% Similarity=0.236 Sum_probs=56.5
Q ss_pred HHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHh----hhc--
Q 024306 123 CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE----QIT-- 177 (269)
Q Consensus 123 ~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~----~~~-- 177 (269)
++..+.+..---.|++|+|.|++|.+|..+++.+..+|++|+.+.++. .+.. +..
T Consensus 158 a~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~ 237 (351)
T 1yb5_A 158 AYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGE 237 (351)
T ss_dssp HHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCT
T ss_pred HHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCC
Confidence 344454322223689999999955579999999999999988876541 1111 112
Q ss_pred CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeee
Q 024306 178 SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGT 209 (269)
Q Consensus 178 ~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~ 209 (269)
+..|+||+++|.+.+ -.-+.++++-.++.++.
T Consensus 238 ~~~D~vi~~~G~~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 238 KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp TCEEEEEESCHHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCcEEEEECCChHHHHHHHHhccCCCEEEEEec
Confidence 258999999886432 12234667666777774
No 343
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=96.04 E-value=0.011 Score=52.44 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=31.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++|+|.|++|.+|+.++..|+++|++|+++.|.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecC
Confidence 46899999998889999999999999999998764
No 344
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=96.04 E-value=0.0064 Score=50.21 Aligned_cols=55 Identities=11% Similarity=0.045 Sum_probs=41.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCCC-----------CHh--hhcCC--CCEEEeccCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK-----------NPE--QITSE--ADIVIAAAGV 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t~-----------~l~--~~~~~--aDiVIsAtg~ 189 (269)
.+++|+|.|++|.+|+.++..|.++|+ +|+++.|... ++. +.+.+ .|+||+++|.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~~ 75 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGT 75 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhhhcEEEECeee
Confidence 468999999988899999999999998 8998876532 111 11222 7999988774
No 345
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=96.03 E-value=0.0051 Score=51.95 Aligned_cols=35 Identities=23% Similarity=0.259 Sum_probs=32.0
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+|+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 47889999999999999999999999999998775
No 346
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=96.02 E-value=0.0078 Score=53.53 Aligned_cols=58 Identities=16% Similarity=0.381 Sum_probs=45.7
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCC-------CEEEEEeCCCC---------------------CHhhhc-CCCCE
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHH-------ATVSIVHALTK---------------------NPEQIT-SEADI 182 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~g-------a~Vti~~~~t~---------------------~l~~~~-~~aDi 182 (269)
..+++++|+|.|++|.+|+.++..|.++| ++|+++.|... .+.+.+ ...|+
T Consensus 10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~ 89 (342)
T 2hrz_A 10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDV 89 (342)
T ss_dssp SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence 45789999999998889999999999999 78988876421 123345 47899
Q ss_pred EEeccCC
Q 024306 183 VIAAAGV 189 (269)
Q Consensus 183 VIsAtg~ 189 (269)
||...+.
T Consensus 90 vih~A~~ 96 (342)
T 2hrz_A 90 IFHLAAI 96 (342)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9988774
No 347
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=96.02 E-value=0.0051 Score=53.08 Aligned_cols=53 Identities=11% Similarity=0.165 Sum_probs=44.2
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCC----CEEEEEeCCC--------CCHhhhcCCCCEEEeccCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT--------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~g----a~Vti~~~~t--------~~l~~~~~~aDiVIsAtg~ 189 (269)
..+|.|||.|.+ |.+++..|.+.| .+|++++++. .+..+.++++|+||.+++.
T Consensus 4 ~m~i~iiG~G~m-G~~~a~~l~~~g~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~ 68 (262)
T 2rcy_A 4 NIKLGFMGLGQM-GSALAHGIANANIIKKENLFYYGPSKKNTTLNYMSSNEELARHCDIIVCAVKP 68 (262)
T ss_dssp SSCEEEECCSHH-HHHHHHHHHHHTSSCGGGEEEECSSCCSSSSEECSCHHHHHHHCSEEEECSCT
T ss_pred CCEEEEECcCHH-HHHHHHHHHHCCCCCCCeEEEEeCCcccCceEEeCCHHHHHhcCCEEEEEeCH
Confidence 457999999886 999999999888 5799998764 2566778899999999983
No 348
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=96.02 E-value=0.0054 Score=53.77 Aligned_cols=37 Identities=22% Similarity=0.162 Sum_probs=31.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|.++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 61 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR 61 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4689999999998888999999999999999998775
No 349
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=96.01 E-value=0.0048 Score=54.25 Aligned_cols=38 Identities=24% Similarity=0.216 Sum_probs=34.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRD 49 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 46899999999998888999999999999999999775
No 350
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.01 E-value=0.0028 Score=57.30 Aligned_cols=91 Identities=16% Similarity=0.172 Sum_probs=60.9
Q ss_pred cCCHHHHHHHHHHh-----CCCCccceEEEEcCCcccHHHHHHHHHhC--CCEEEEEeCCCC--------------CH--
Q 024306 117 PCTPKGCIELLIRS-----GVEIMGKNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALTK--------------NP-- 173 (269)
Q Consensus 117 p~t~~g~~~~l~~~-----~~~l~gk~v~ViG~gg~vg~~~a~~L~~~--ga~Vti~~~~t~--------------~l-- 173 (269)
||....++..++.. ++ .|++|+|+|+|+ +|..+++++... |++|+.+.++.. +.
T Consensus 149 ~~~~~ta~~al~~~~~~~~~~--~g~~VlV~GaG~-vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~ 225 (344)
T 2h6e_A 149 ADAGTTSMGAIRQALPFISKF--AEPVVIVNGIGG-LAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKD 225 (344)
T ss_dssp GTHHHHHHHHHHHHHHHHTTC--SSCEEEEECCSH-HHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHH
T ss_pred hhhhHHHHHHHHhhhhcccCC--CCCEEEEECCCH-HHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEecccc
Confidence 44444445666655 55 899999999965 699999999988 999888865421 11
Q ss_pred -----hhhc--CCCCEEEeccCCCCcc--cCCCcCCCcEEEEeeec
Q 024306 174 -----EQIT--SEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 174 -----~~~~--~~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
.+.. +.+|+||+++|.+..+ .-+.++++-.++.++..
T Consensus 226 ~~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 271 (344)
T 2h6e_A 226 AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGME 271 (344)
T ss_dssp HHHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred chHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCC
Confidence 0111 1589999999976332 22456777677777754
No 351
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=96.01 E-value=0.013 Score=49.86 Aligned_cols=34 Identities=24% Similarity=0.209 Sum_probs=31.5
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+|+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRN 35 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999999889999999999999999998775
No 352
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=96.01 E-value=0.0085 Score=52.29 Aligned_cols=39 Identities=28% Similarity=0.396 Sum_probs=35.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|+.
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 40 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSA 40 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccc
Confidence 468999999999998889999999999999999998764
No 353
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=96.01 E-value=0.011 Score=51.61 Aligned_cols=53 Identities=19% Similarity=0.122 Sum_probs=42.7
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCCCCC-----------------------HhhhcCCCCEEEeccC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTKN-----------------------PEQITSEADIVIAAAG 188 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~t~~-----------------------l~~~~~~aDiVIsAtg 188 (269)
.++|+|.|++|.+|+.++..|.++| ++|+++.|.... +.+.++.+|+||+.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 5789999998889999999999998 899998776321 2345677888887766
No 354
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=96.00 E-value=0.0069 Score=53.12 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=34.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 65 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARH 65 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999998888999999999999999999775
No 355
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=96.00 E-value=0.0043 Score=53.54 Aligned_cols=37 Identities=19% Similarity=0.305 Sum_probs=33.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998888999999999999999998775
No 356
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.99 E-value=0.0083 Score=54.59 Aligned_cols=58 Identities=16% Similarity=0.298 Sum_probs=44.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC-----------------------CCHhhhcCCCCEEEec
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-----------------------KNPEQITSEADIVIAA 186 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t-----------------------~~l~~~~~~aDiVIsA 186 (269)
.+-.+++|.|||+|.+ |.+++..|+..+. ++.+++... .+..+.+++||+||.+
T Consensus 5 ~~~~~~kV~ViGaG~v-G~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ 83 (326)
T 3vku_A 5 TDKDHQKVILVGDGAV-GSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVIT 83 (326)
T ss_dssp --CCCCEEEEECCSHH-HHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEEC
T ss_pred ccCCCCEEEEECCCHH-HHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEEC
Confidence 3457789999999775 9999999998885 788886531 1224678999999999
Q ss_pred cCCC
Q 024306 187 AGVA 190 (269)
Q Consensus 187 tg~p 190 (269)
.|.|
T Consensus 84 ag~~ 87 (326)
T 3vku_A 84 AGAP 87 (326)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9864
No 357
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=95.99 E-value=0.0098 Score=52.86 Aligned_cols=36 Identities=19% Similarity=0.102 Sum_probs=29.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++|+|+|.|++|.+|+.++..|+++|++|+++.|.
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~ 38 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRD 38 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECC
Confidence 368999999999989999999999999999876554
No 358
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=95.98 E-value=0.0076 Score=51.72 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=31.4
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
||+++|.|+++-+|+++++.|+++|++|.++.+.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6899999998888999999999999999999775
No 359
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=95.98 E-value=0.012 Score=53.29 Aligned_cols=94 Identities=11% Similarity=0.065 Sum_probs=58.3
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCC-----------------------
Q 024306 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN----------------------- 172 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~----------------------- 172 (269)
+|+.+..++..+.+..---.|.+|+|+|++|.+|..+++++...|++|.++.+..++
T Consensus 148 l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~ 227 (357)
T 1zsy_A 148 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELR 227 (357)
T ss_dssp TTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHH
T ss_pred hcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcch
Confidence 344444445555554333479999999996667999999999999986554322111
Q ss_pred ---HhhhcC---CCCEEEeccCCCCcc-cCCCcCCCcEEEEeee
Q 024306 173 ---PEQITS---EADIVIAAAGVANLV-RGSWLKPGAVVLDVGT 209 (269)
Q Consensus 173 ---l~~~~~---~aDiVIsAtg~p~~i-~~~~~~~g~vViDv~~ 209 (269)
+.+.+. .+|+||.++|.+... .-+.++++-.++.+|.
T Consensus 228 ~~~~~~~~~~~~~~Dvvid~~g~~~~~~~~~~l~~~G~iv~~G~ 271 (357)
T 1zsy_A 228 RPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGG 271 (357)
T ss_dssp SGGGGGTTSSSCCCSEEEESSCHHHHHHHHTTSCTTCEEEECCC
T ss_pred HHHHHHHHhCCCCceEEEECCCcHHHHHHHHhhCCCCEEEEEec
Confidence 111122 378888888854331 2345677767777764
No 360
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.98 E-value=0.0044 Score=55.41 Aligned_cols=76 Identities=13% Similarity=0.113 Sum_probs=53.3
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHh----hhc--CCCCEEEeccC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE----QIT--SEADIVIAAAG 188 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~----~~~--~~aDiVIsAtg 188 (269)
-.|++|+|.|+++.+|..+++.+...|++|+++.++. .+.. +.+ ...|++|+++|
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g 218 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG 218 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence 3699999999755569999999999999988886541 1111 112 24799999998
Q ss_pred CCCcc--cCCCcCCCcEEEEeeec
Q 024306 189 VANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 189 ~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
+..+ .-+.++++-.++.++..
T Consensus 219 -~~~~~~~~~~l~~~G~iv~~g~~ 241 (327)
T 1qor_A 219 -RDTWERSLDCLQRRGLMVSFGNS 241 (327)
T ss_dssp -GGGHHHHHHTEEEEEEEEECCCT
T ss_pred -hHHHHHHHHHhcCCCEEEEEecC
Confidence 3322 23456777777788754
No 361
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.97 E-value=0.0037 Score=56.55 Aligned_cols=84 Identities=14% Similarity=0.247 Sum_probs=57.6
Q ss_pred HHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC-------------------CCHhhhc------
Q 024306 124 IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQIT------ 177 (269)
Q Consensus 124 ~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t-------------------~~l~~~~------ 177 (269)
+..++..++ .|++|+|+|+|+ +|..+++++..+|+ +|+.+.++. .++.+.+
T Consensus 158 ~~~l~~~~~--~g~~VlV~GaG~-vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g 234 (348)
T 2d8a_A 158 VDTVLAGPI--SGKSVLITGAGP-LGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDG 234 (348)
T ss_dssp HHHHTTSCC--TTCCEEEECCSH-HHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTT
T ss_pred HHHHHhcCC--CCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCC
Confidence 334433334 899999999955 59999999999999 888876541 1222222
Q ss_pred CCCCEEEeccCCCCccc--CCCcCCCcEEEEeeec
Q 024306 178 SEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 178 ~~aDiVIsAtg~p~~i~--~~~~~~g~vViDv~~~ 210 (269)
+.+|+||+++|.+..+. -+.++++-.++.++..
T Consensus 235 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~ 269 (348)
T 2d8a_A 235 NGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLY 269 (348)
T ss_dssp SCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccC
Confidence 25899999999744322 2356777778888864
No 362
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.96 E-value=0.0045 Score=56.24 Aligned_cols=77 Identities=12% Similarity=0.072 Sum_probs=53.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHh----hhc--CCCCEEEeccC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE----QIT--SEADIVIAAAG 188 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~----~~~--~~aDiVIsAtg 188 (269)
-.|++|+|.|++|.+|..+++.+...|++|+++.++. .+.. +.. ...|++|+++|
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G 240 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIG 240 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCC
Confidence 3689999999755579999999999999988876542 1111 122 25799999998
Q ss_pred CCCc-ccCCCcCCCcEEEEeeec
Q 024306 189 VANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 189 ~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
.+.+ -.-+.++++-.++.++..
T Consensus 241 ~~~~~~~~~~l~~~G~iv~~G~~ 263 (354)
T 2j8z_A 241 GSYWEKNVNCLALDGRWVLYGLM 263 (354)
T ss_dssp GGGHHHHHHHEEEEEEEEECCCT
T ss_pred chHHHHHHHhccCCCEEEEEecc
Confidence 7532 122356777777778754
No 363
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=95.94 E-value=0.0094 Score=53.41 Aligned_cols=36 Identities=33% Similarity=0.224 Sum_probs=32.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++++|+|.|++|.+|+.++..|.++|++|+++.|.
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999998765
No 364
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.93 E-value=0.0077 Score=52.79 Aligned_cols=36 Identities=22% Similarity=0.102 Sum_probs=30.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||+++|.|+++-+|+++++.|+++|++|.++.|.
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999998888999999999999999998775
No 365
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=95.93 E-value=0.0089 Score=50.56 Aligned_cols=38 Identities=26% Similarity=0.266 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+.+++.|+++|++|+++.|.
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998889999999999999999998765
No 366
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.93 E-value=0.011 Score=52.57 Aligned_cols=88 Identities=11% Similarity=0.039 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhh--------------h-cCCCCEEE
Q 024306 120 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQ--------------I-TSEADIVI 184 (269)
Q Consensus 120 ~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~~--------------~-~~~aDiVI 184 (269)
..-++..+ +..---.|.+|+|+|+ |.+|..+++++...|++|+.+. +...++. . -+.+|+||
T Consensus 128 ~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~ 204 (315)
T 3goh_A 128 LLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIF 204 (315)
T ss_dssp HHHHHHHH-TTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEE
T ss_pred HHHHHHHH-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEE
Confidence 33345555 2323347999999999 4569999999999999988776 3322211 0 14589999
Q ss_pred eccCCCCc-ccCCCcCCCcEEEEeeec
Q 024306 185 AAAGVANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 185 sAtg~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
.++|.+.. -.-+.++++-.++.++..
T Consensus 205 d~~g~~~~~~~~~~l~~~G~~v~~g~~ 231 (315)
T 3goh_A 205 DAVNSQNAAALVPSLKANGHIICIQDR 231 (315)
T ss_dssp CC-------TTGGGEEEEEEEEEECCC
T ss_pred ECCCchhHHHHHHHhcCCCEEEEEeCC
Confidence 99997654 223457777777777643
No 367
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=95.93 E-value=0.015 Score=51.91 Aligned_cols=36 Identities=19% Similarity=0.213 Sum_probs=31.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++++|+|.|++|.+|+.++..|.++|++|+++.|.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999989999999999999999998764
No 368
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=95.92 E-value=0.0077 Score=52.77 Aligned_cols=39 Identities=23% Similarity=0.220 Sum_probs=35.1
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.+++||+++|.|+++-+|++++..|+++|++|.++.|+.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 67 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKP 67 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 468999999999988889999999999999999997763
No 369
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=95.92 E-value=0.011 Score=51.55 Aligned_cols=39 Identities=13% Similarity=0.139 Sum_probs=33.4
Q ss_pred CCCccceEEEEcCCcc--cHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNI--VGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~--vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
-+++||+++|.|+++. +|+++++.|+++|++|.++.+..
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 3578999999997644 69999999999999999987753
No 370
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=95.91 E-value=0.0033 Score=56.09 Aligned_cols=86 Identities=22% Similarity=0.185 Sum_probs=53.4
Q ss_pred HHHHHHhCCCCc-cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCCCHhhh--c-------------------CCCC
Q 024306 124 IELLIRSGVEIM-GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQI--T-------------------SEAD 181 (269)
Q Consensus 124 ~~~l~~~~~~l~-gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~~l~~~--~-------------------~~aD 181 (269)
+..+++.++... |+ |+|+|++|.+|..+++++...|++|+.+.++...++.. + ...|
T Consensus 135 l~~~~~~~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d 213 (324)
T 3nx4_A 135 VMALEDAGIRPQDGE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWA 213 (324)
T ss_dssp HHHHHHTTCCGGGCC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEE
T ss_pred HHHhhhcccCCCCCe-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCcc
Confidence 344444444433 45 99999966679999999999999988876543221100 0 2357
Q ss_pred EEEeccCCCCc-ccCCCcCCCcEEEEeeec
Q 024306 182 IVIAAAGVANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 182 iVIsAtg~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
++|.++|.+.+ -.-+.++++-.++.++..
T Consensus 214 ~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 214 GAIDTVGDKVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp EEEESSCHHHHHHHHHTEEEEEEEEECCCT
T ss_pred EEEECCCcHHHHHHHHHHhcCCEEEEEecC
Confidence 77777775422 122356676677777754
No 371
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=95.91 E-value=0.0056 Score=56.67 Aligned_cols=36 Identities=11% Similarity=0.255 Sum_probs=32.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCC-CEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~g-a~Vti~~~~ 169 (269)
+++|+|+|.|++|.+|+.++..|+++| ++|+++.|.
T Consensus 33 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~ 69 (399)
T 3nzo_A 33 VSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDIS 69 (399)
T ss_dssp HHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred hCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECC
Confidence 578999999999999999999999999 689998765
No 372
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=95.90 E-value=0.011 Score=51.92 Aligned_cols=57 Identities=16% Similarity=0.156 Sum_probs=42.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC-----------C------HhhhcCC--CCEEEeccCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------N------PEQITSE--ADIVIAAAGV 189 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~-----------~------l~~~~~~--aDiVIsAtg~ 189 (269)
..+-++|+|.|++|.+|+.++..|.++|++|+++.|... + +.+.++. .|+||...+.
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 84 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAK 84 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 346788999999999999999999999999999877531 1 2334444 7999988774
No 373
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.90 E-value=0.012 Score=53.64 Aligned_cols=77 Identities=18% Similarity=0.169 Sum_probs=53.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC---------------------CCHhhhcC-----CCCEEEec
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT---------------------KNPEQITS-----EADIVIAA 186 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t---------------------~~l~~~~~-----~aDiVIsA 186 (269)
-.|++|+|+|+|+ ||..+++++...|+ +|+.+.+.. .++.+.++ .+|+||.+
T Consensus 190 ~~g~~VlV~GaG~-vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~ 268 (373)
T 1p0f_A 190 TPGSTCAVFGLGG-VGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC 268 (373)
T ss_dssp CTTCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEEC
Confidence 3689999999866 59999999999999 788775431 11222221 58999999
Q ss_pred cCCCCcc--cCCCcCCC-cEEEEeeecC
Q 024306 187 AGVANLV--RGSWLKPG-AVVLDVGTCP 211 (269)
Q Consensus 187 tg~p~~i--~~~~~~~g-~vViDv~~~~ 211 (269)
+|.+..+ .-+.++++ -.++.++...
T Consensus 269 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~ 296 (373)
T 1p0f_A 269 AGRIETMMNALQSTYCGSGVTVVLGLAS 296 (373)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEECCCCC
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEccCC
Confidence 9975432 23467777 7777887543
No 374
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=95.89 E-value=0.0071 Score=56.34 Aligned_cols=70 Identities=27% Similarity=0.375 Sum_probs=51.6
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------------------CCHhhhcCCCCEEEe
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------KNPEQITSEADIVIA 185 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------------------------~~l~~~~~~aDiVIs 185 (269)
+|.|||.|.+ |.+++..|++ |.+|++++++. .+..+.+++||+||.
T Consensus 2 kI~VIG~G~v-G~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 2 KIAVAGSGYV-GLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp EEEEECCSHH-HHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred EEEEECCCHH-HHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 6899999886 9999999998 99999997642 122345667999999
Q ss_pred ccCCCC-----------c------ccCCCcCCCcEEEEeeecC
Q 024306 186 AAGVAN-----------L------VRGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 186 Atg~p~-----------~------i~~~~~~~g~vViDv~~~~ 211 (269)
+++.|. . +.+ ++++++|++...++
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~~~i~~--l~~~~iVV~~ST~~ 120 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVIKEVLS--VNSHATLIIKSTIP 120 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHHHHHHH--HCSSCEEEECSCCC
T ss_pred ecCCCcccCCCCccHHHHHHHHHHHHh--hCCCCEEEEeCCCC
Confidence 998761 1 111 57888888844443
No 375
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=95.89 E-value=0.0048 Score=55.83 Aligned_cols=92 Identities=12% Similarity=-0.040 Sum_probs=58.9
Q ss_pred cCCHHHHHHHHHHhCCCCcc-ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHhhh
Q 024306 117 PCTPKGCIELLIRSGVEIMG-KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQI 176 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~g-k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~~~ 176 (269)
|+.+..+..+++..+ ..| +.++|.|++|.+|..+++++...|++|+.+.++. .++.+.
T Consensus 147 ~~~~~ta~~~~~~~~--~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~ 224 (349)
T 3pi7_A 147 IVNPLTAIAMFDIVK--QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEAT 224 (349)
T ss_dssp SHHHHHHHHHHHHHH--HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHH
T ss_pred cccHHHHHHHHHHHh--hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHH
Confidence 333333444444443 345 6777776656679999999999999988876542 122222
Q ss_pred c------CCCCEEEeccCCCCc-ccCCCcCCCcEEEEeeec
Q 024306 177 T------SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 177 ~------~~aDiVIsAtg~p~~-i~~~~~~~g~vViDv~~~ 210 (269)
+ +..|+||+++|.+.. -.-+.++++-.++.+|..
T Consensus 225 v~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 265 (349)
T 3pi7_A 225 LREVMKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRL 265 (349)
T ss_dssp HHHHHHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCS
T ss_pred HHHHhcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEecc
Confidence 2 358999999996543 122357787788888854
No 376
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=95.89 E-value=0.065 Score=48.78 Aligned_cols=141 Identities=11% Similarity=0.025 Sum_probs=94.8
Q ss_pred HHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceec
Q 024306 28 NKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIG 104 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~~~---~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g 104 (269)
+-..++.++|.++.+..|..+. .-|-+.+.++-|+.- +|+|.+--|-.. ....+.++. .+-.+|.|
T Consensus 61 SFE~A~~~LGg~~i~~~l~~~ss~~kgEsl~DTarvls~~--~D~iviR~~~~~--~~~~lA~~~-------~vPVINag 129 (328)
T 3grf_A 61 SLETAMTRLGGHAIYYELGANSNVGGKETVQDTAEVFSRM--VDICTARLATKE--MMREMAQHA-------SVPCINAL 129 (328)
T ss_dssp HHHHHHHHHTCEEEEEEC----------CHHHHHHHHTTT--CSEEEEECSSHH--HHHHHHHHC-------SSCEEESS
T ss_pred HHHHHHHHCCCeEEccccCccccCCCCCCHHHHHHHHHhh--CCEEEEecCChh--HHHHHHHhC-------CCCEEeCC
Confidence 4567899999999985554321 134578888888873 899999877321 112222221 12344542
Q ss_pred ccccCCCCCccccCCHHH-HHHHHHHhC------CCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCCC------
Q 024306 105 NLAMRGREPLFIPCTPKG-CIELLIRSG------VEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHALT------ 170 (269)
Q Consensus 105 ~l~~g~~~~~~~p~t~~g-~~~~l~~~~------~~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~t------ 170 (269)
++.+.||=+.+ ++.+.++.+ ..++|.+|+++|-+ ..|++.++..+...|++|+++....
T Consensus 130 -------~~~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~ 202 (328)
T 3grf_A 130 -------DDFGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPI 202 (328)
T ss_dssp -------CSSCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCC
T ss_pred -------CCCCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCC
Confidence 22466887777 556666665 27999999999987 6679999999999999999985431
Q ss_pred -----------------------CCHhhhcCCCCEEEec
Q 024306 171 -----------------------KNPEQITSEADIVIAA 186 (269)
Q Consensus 171 -----------------------~~l~~~~~~aDiVIsA 186 (269)
.++.+.+++||+|.+.
T Consensus 203 ~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvytd 241 (328)
T 3grf_A 203 KEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTD 241 (328)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCEEEec
Confidence 2455678999999974
No 377
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.88 E-value=0.0097 Score=54.63 Aligned_cols=72 Identities=8% Similarity=0.073 Sum_probs=55.3
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------CCHhhhcCCCCEEEecc
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------------------~~l~~~~~~aDiVIsAt 187 (269)
..+|.|||+|.. |.+++..|++.|.+|++..|.. .++.+.+++||+||.++
T Consensus 29 ~mkI~VIGaG~m-G~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV 107 (356)
T 3k96_A 29 KHPIAILGAGSW-GTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV 107 (356)
T ss_dssp CSCEEEECCSHH-HHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred CCeEEEECccHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence 468999999886 9999999999999999997641 24556788999999999
Q ss_pred CCCC---ccc--CCCcCCCcEEEEee
Q 024306 188 GVAN---LVR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 188 g~p~---~i~--~~~~~~g~vViDv~ 208 (269)
+... .+. ...++++++|+++.
T Consensus 108 p~~~~~~vl~~i~~~l~~~~ivvs~~ 133 (356)
T 3k96_A 108 PSFAFHEVITRMKPLIDAKTRIAWGT 133 (356)
T ss_dssp CHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 8532 111 23467888888874
No 378
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=95.88 E-value=0.0078 Score=51.51 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.+++.|+++|++|+++.|.
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 47 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRS 47 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESS
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCc
Confidence 4789999999999989999999999999999999874
No 379
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.87 E-value=0.013 Score=53.51 Aligned_cols=76 Identities=21% Similarity=0.196 Sum_probs=53.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCCC---------------------CHhhhcC-----CCCEEEec
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------NPEQITS-----EADIVIAA 186 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t~---------------------~l~~~~~-----~aDiVIsA 186 (269)
-.|++|+|+|+|+ +|..+++++..+|+ +|+.+.++.. ++.+.++ .+|+||++
T Consensus 191 ~~g~~VlV~GaG~-vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 269 (374)
T 1cdo_A 191 EPGSTCAVFGLGA-VGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269 (374)
T ss_dssp CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEEC
Confidence 4689999999866 59999999999999 7887754321 1222221 48999999
Q ss_pred cCCCCcc--cCCCcCCC-cEEEEeeec
Q 024306 187 AGVANLV--RGSWLKPG-AVVLDVGTC 210 (269)
Q Consensus 187 tg~p~~i--~~~~~~~g-~vViDv~~~ 210 (269)
+|.+..+ .-+.++++ -.++.++..
T Consensus 270 ~g~~~~~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 270 VGNVGVMRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCCHHHHHHHHHHhhcCCcEEEEEcCC
Confidence 9875432 23467777 777777754
No 380
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.86 E-value=0.011 Score=53.86 Aligned_cols=77 Identities=19% Similarity=0.207 Sum_probs=53.8
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCCC---------------------CHhhhc-----CCCCEEEec
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------NPEQIT-----SEADIVIAA 186 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t~---------------------~l~~~~-----~~aDiVIsA 186 (269)
-.|++|+|+|+|+ +|..+++++..+|+ +|+.+.+... ++.+.+ ..+|+||++
T Consensus 190 ~~g~~VlV~GaG~-vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~ 268 (374)
T 2jhf_A 190 TQGSTCAVFGLGG-VGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268 (374)
T ss_dssp CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEEC
Confidence 4789999999866 59999999999999 7887754321 122222 147999999
Q ss_pred cCCCCcc--cCCCcCCC-cEEEEeeecC
Q 024306 187 AGVANLV--RGSWLKPG-AVVLDVGTCP 211 (269)
Q Consensus 187 tg~p~~i--~~~~~~~g-~vViDv~~~~ 211 (269)
+|.+..+ .-+.++++ -.++.++...
T Consensus 269 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~ 296 (374)
T 2jhf_A 269 IGRLDTMVTALSCCQEAYGVSVIVGVPP 296 (374)
T ss_dssp SCCHHHHHHHHHHBCTTTCEEEECSCCC
T ss_pred CCCHHHHHHHHHHhhcCCcEEEEeccCC
Confidence 9875433 23457777 7777787543
No 381
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=95.86 E-value=0.0073 Score=52.86 Aligned_cols=40 Identities=20% Similarity=0.220 Sum_probs=36.1
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.++|+||.++|-|++.-+|++++..|+++||+|.++.++.
T Consensus 4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~ 43 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRA 43 (247)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 3689999999999988889999999999999999998763
No 382
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=95.84 E-value=0.006 Score=54.16 Aligned_cols=39 Identities=15% Similarity=0.299 Sum_probs=35.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|..
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 75 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSP 75 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 568999999999988889999999999999999997763
No 383
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=95.84 E-value=0.0097 Score=50.66 Aligned_cols=38 Identities=18% Similarity=0.237 Sum_probs=34.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999999999999999999999998775
No 384
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=95.82 E-value=0.0079 Score=51.34 Aligned_cols=36 Identities=25% Similarity=0.197 Sum_probs=29.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|++++..|++ |+.|.++.|.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~ 37 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRN 37 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESC
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCC
Confidence 46799999999988889999999987 8899988775
No 385
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=95.82 E-value=0.01 Score=50.32 Aligned_cols=37 Identities=24% Similarity=0.252 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.+++.|+++|++|.++.|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999999998775
No 386
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=95.82 E-value=0.0083 Score=55.50 Aligned_cols=38 Identities=13% Similarity=0.023 Sum_probs=33.3
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK 171 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~ 171 (269)
..+++|+|.|++|.+|+.++..|.++|++|+++.|...
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 46789999999999999999999999999998877643
No 387
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.82 E-value=0.0076 Score=54.38 Aligned_cols=75 Identities=17% Similarity=0.143 Sum_probs=52.8
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-------------------CCHh----hhc--CCCCEEEeccCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE----QIT--SEADIVIAAAGV 189 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-------------------~~l~----~~~--~~aDiVIsAtg~ 189 (269)
.|++|+|+|++|.+|..+++++..+|++|+.+.++. .++. +.. ...|+||+++|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g- 244 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG- 244 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 689999999966679999999999999988876541 1211 222 25799999999
Q ss_pred CCcc--cCCCcCCCcEEEEeeec
Q 024306 190 ANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 190 p~~i--~~~~~~~g~vViDv~~~ 210 (269)
+..+ .-+.++++-.++.++..
T Consensus 245 ~~~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 245 ALYFEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp SSSHHHHHHHEEEEEEEEESSCC
T ss_pred HHHHHHHHHhhccCCEEEEEecC
Confidence 4332 22346776677777754
No 388
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=95.82 E-value=0.016 Score=51.34 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=29.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
+|+|+|.|++|.+|+.++..|.++|++|+++.|
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc
Confidence 789999999888999999999999999987654
No 389
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=95.81 E-value=0.0091 Score=51.61 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=49.5
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC-C-------------CCHhhhcCCCCEEEeccCCCCc---cc--CCCc
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-T-------------KNPEQITSEADIVIAAAGVANL---VR--GSWL 198 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~-t-------------~~l~~~~~~aDiVIsAtg~p~~---i~--~~~~ 198 (269)
+|.|||.|.+ |.+++..|.+.|.+|+++++. . .+..+.++++|+||.+++.+.. +. .+.+
T Consensus 2 ~I~iIG~G~m-G~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~ 80 (264)
T 1i36_A 2 RVGFIGFGEV-AQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVALGAARRAGRHV 80 (264)
T ss_dssp EEEEESCSHH-HHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTC
T ss_pred eEEEEechHH-HHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCcCCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhc
Confidence 6899999887 999999999999999987662 1 1334567889999999986431 11 1124
Q ss_pred CCCcEEEEee
Q 024306 199 KPGAVVLDVG 208 (269)
Q Consensus 199 ~~g~vViDv~ 208 (269)
++ +++|+.
T Consensus 81 ~~--~vi~~s 88 (264)
T 1i36_A 81 RG--IYVDIN 88 (264)
T ss_dssp CS--EEEECS
T ss_pred Cc--EEEEcc
Confidence 44 888875
No 390
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.81 E-value=0.018 Score=50.96 Aligned_cols=53 Identities=19% Similarity=0.271 Sum_probs=41.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~ 189 (269)
.+|+|.|++|.+|+.++..|.++|++|+++.|... ++.+.++..|+||...+.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 47999999898999999999999999999877532 133556788999988774
No 391
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=95.81 E-value=0.085 Score=48.69 Aligned_cols=162 Identities=16% Similarity=0.111 Sum_probs=104.7
Q ss_pred HHHHHHHHcCCeEEEEEcCC-C-CCHHHHHHHHHhhhcCCCcCEEEEeCCCCCCCCHHHHHhcCCccccccccccceecc
Q 024306 28 NKIKACEEVGIKSIVTEFAD-G-CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGN 105 (269)
Q Consensus 28 ~~~~~~~~~Gi~~~~~~~~~-~-~~~~~l~~~i~~ln~d~~v~Gi~V~~Pl~~~~~~~~i~~~i~p~kdvdg~~~~n~g~ 105 (269)
+-..++.++|.++.++.-.. . -.-|-+.+.++-|..- +|+|.+--|-. ..+..+.... ++-.+|.|
T Consensus 88 SFE~A~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~~--~D~IviR~~~~------~~~~~lA~~s---~vPVINa~- 155 (365)
T 4amu_A 88 AFEVAASDLGAGVTYIGPSGSNMGKKESIEDTAKVLGRF--YDGIEFRGFAQ------SDVDALVKYS---GVPVWNGL- 155 (365)
T ss_dssp HHHHHHHHHTCEEEEECHHHHCCSSSSCHHHHHHHHHHH--CSEEEEECSCH------HHHHHHHHHH---CSCEEEEE-
T ss_pred HHHHHHHhCCCEEEEcCCccccCCCCcCHHHHHHHHHhh--CcEEEEecCCh------hHHHHHHHhC---CCCEEeCC-
Confidence 45678999999999873210 0 0124466666666663 68998876632 2222222111 23345652
Q ss_pred cccCCCCCccccCCHHH-HHHHHHHhCCCCccceEEEEcCC-cccHHHHHHHHHhCCCEEEEEeCCC-------------
Q 024306 106 LAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHALT------------- 170 (269)
Q Consensus 106 l~~g~~~~~~~p~t~~g-~~~~l~~~~~~l~gk~v~ViG~g-g~vg~~~a~~L~~~ga~Vti~~~~t------------- 170 (269)
++.+.||=+.+ ++.+.|+.+ .++|++|+++|-+ ..|++.++.+++..|++|+++....
T Consensus 156 ------~~~~HPtQaLaDl~Ti~E~~G-~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~ 228 (365)
T 4amu_A 156 ------TDDEHPTQIIADFMTMKEKFG-NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKC 228 (365)
T ss_dssp ------CSSCCHHHHHHHHHHHHHHHS-SCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHH
T ss_pred ------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHH
Confidence 23456887777 455555555 5999999999987 4579999999999999999985421
Q ss_pred --------------CCHhhhcCCCCEEEecc----CCC------------Cc-ccCCCc---CCCcEEEEee
Q 024306 171 --------------KNPEQITSEADIVIAAA----GVA------------NL-VRGSWL---KPGAVVLDVG 208 (269)
Q Consensus 171 --------------~~l~~~~~~aDiVIsAt----g~p------------~~-i~~~~~---~~g~vViDv~ 208 (269)
.++.+.+++||+|.+-+ |.+ .+ ++.+.+ +++++|+=+.
T Consensus 229 ~~~~~~~g~~i~~~~d~~eav~~aDVVytd~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 229 IELFKRNGGSLRFSTDKILAAQDADVIYTDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp HHHHHHHSCEEEEESCHHHHTTTCSEEEECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECS
T ss_pred HHHHHHcCCEEEEECCHHHHhcCCCEEEecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 34567899999999742 311 13 566654 4677776655
No 392
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.81 E-value=0.0099 Score=54.38 Aligned_cols=93 Identities=15% Similarity=0.170 Sum_probs=60.2
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCCC---------------------CHh
Q 024306 117 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------NPE 174 (269)
Q Consensus 117 p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t~---------------------~l~ 174 (269)
||.....+..+.+..---.|.+|+|+|+|+ +|..+++++...|+ +|+.+.+... ++.
T Consensus 175 ~~~~~ta~~al~~~~~~~~g~~VlV~GaG~-vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~ 253 (378)
T 3uko_A 175 GCGVPTGLGAVWNTAKVEPGSNVAIFGLGT-VGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQ 253 (378)
T ss_dssp GTHHHHHHHHHHTTTCCCTTCCEEEECCSH-HHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHH
T ss_pred hhhHHHHHHHHHhhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHH
Confidence 333333344343332234699999999966 59999999999999 6888764421 122
Q ss_pred hhcC-----CCCEEEeccCCCCcc--cCCCcCCC-cEEEEeeec
Q 024306 175 QITS-----EADIVIAAAGVANLV--RGSWLKPG-AVVLDVGTC 210 (269)
Q Consensus 175 ~~~~-----~aDiVIsAtg~p~~i--~~~~~~~g-~vViDv~~~ 210 (269)
+.++ .+|+||.++|.+..+ .-+.++++ -.++.+|..
T Consensus 254 ~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 254 EVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp HHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred HHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEccc
Confidence 2111 489999999976443 23467885 777788864
No 393
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=95.79 E-value=0.011 Score=50.56 Aligned_cols=36 Identities=31% Similarity=0.277 Sum_probs=31.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+.+|+++|.|+++-+|+++++.|+++|++|.++.+.
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999998888999999999999999887653
No 394
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=95.79 E-value=0.011 Score=50.91 Aligned_cols=38 Identities=29% Similarity=0.374 Sum_probs=34.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+.++..|+++|++|.++.|+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 45789999999998888999999999999999998765
No 395
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.78 E-value=0.009 Score=54.08 Aligned_cols=88 Identities=20% Similarity=0.175 Sum_probs=60.4
Q ss_pred HHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC-------------------CCHh----hhc
Q 024306 122 GCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPE----QIT 177 (269)
Q Consensus 122 g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t-------------------~~l~----~~~ 177 (269)
-++..++..++ -.|.+|+|+|+|+ +|..+++++...|+ +|+.+.+.. .++. +.+
T Consensus 154 ta~~al~~~~~-~~g~~VlV~GaG~-vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t 231 (352)
T 3fpc_A 154 TGFHGAELANI-KLGDTVCVIGIGP-VGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKAT 231 (352)
T ss_dssp HHHHHHHHTTC-CTTCCEEEECCSH-HHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHT
T ss_pred HHHHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHc
Confidence 34455544433 4699999999876 59999999999999 688886542 1222 222
Q ss_pred C--CCCEEEeccCCCCcc--cCCCcCCCcEEEEeeecC
Q 024306 178 S--EADIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 178 ~--~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~~ 211 (269)
. .+|+||+++|.+..+ .-+.++++-.++.++...
T Consensus 232 ~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~ 269 (352)
T 3fpc_A 232 DGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLG 269 (352)
T ss_dssp TTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCC
T ss_pred CCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccC
Confidence 2 489999999986543 234678877788887653
No 396
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.76 E-value=0.013 Score=52.48 Aligned_cols=51 Identities=16% Similarity=0.307 Sum_probs=41.4
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCC--------------------------CCCHhhhcCCCCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHAL--------------------------TKNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~--------------------------t~~l~~~~~~aDiVIsAtg~ 189 (269)
+|.|||+|. +|.+++..|+..+. +|+++.+. +.+ .+.+++||+||.++|.
T Consensus 2 kI~ViGaG~-vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 2 KLGFVGAGR-VGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp EEEEECCSH-HHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred EEEEECCCH-HHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 699999966 49999999998886 78888543 123 5788999999999986
Q ss_pred C
Q 024306 190 A 190 (269)
Q Consensus 190 p 190 (269)
|
T Consensus 80 ~ 80 (294)
T 1oju_A 80 A 80 (294)
T ss_dssp C
T ss_pred C
Confidence 5
No 397
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.76 E-value=0.016 Score=51.96 Aligned_cols=52 Identities=21% Similarity=0.376 Sum_probs=40.8
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC--------------------------CCHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t--------------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
.+|+|||+|. ||.+++..|+..|. +|.+++... .++ +.+++||+||.++|.
T Consensus 3 ~kI~VIGaG~-vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~ 80 (309)
T 1ur5_A 3 KKISIIGAGF-VGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA 80 (309)
T ss_dssp CEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CEEEEECCCH-HHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCC
Confidence 5799999966 59999999999985 877775431 233 668999999999986
Q ss_pred C
Q 024306 190 A 190 (269)
Q Consensus 190 p 190 (269)
|
T Consensus 81 p 81 (309)
T 1ur5_A 81 P 81 (309)
T ss_dssp -
T ss_pred C
Confidence 5
No 398
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.75 E-value=0.009 Score=56.10 Aligned_cols=37 Identities=24% Similarity=0.329 Sum_probs=33.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
++++|+|+|||.|++ |.+++..|.++|++|+.++++.
T Consensus 2 ~~~~~~v~viG~G~~-G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLT-GLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp CCTTCCEEEECCHHH-HHHHHHHHHTTTCCCEEEESSS
T ss_pred CCCCCEEEEEeecHH-HHHHHHHHHhCCCEEEEEECCC
Confidence 367899999999998 9999999999999999998753
No 399
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.75 E-value=0.017 Score=52.65 Aligned_cols=75 Identities=19% Similarity=0.203 Sum_probs=52.7
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCCC---------------------CHhhhc-----CCCCEEEec
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------NPEQIT-----SEADIVIAA 186 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t~---------------------~l~~~~-----~~aDiVIsA 186 (269)
-.|++|+|+|+|+ +|..+++++...|+ +|+.+.+... ++.+.+ ..+|+||++
T Consensus 194 ~~g~~VlV~GaG~-vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~ 272 (376)
T 1e3i_A 194 TPGSTCAVFGLGC-VGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDC 272 (376)
T ss_dssp CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEEC
Confidence 3689999999866 59999999999999 7887754321 122222 148999999
Q ss_pred cCCCCcc--cCCCcCCC-cEEEEeee
Q 024306 187 AGVANLV--RGSWLKPG-AVVLDVGT 209 (269)
Q Consensus 187 tg~p~~i--~~~~~~~g-~vViDv~~ 209 (269)
+|.+..+ .-+.++++ -.++-++.
T Consensus 273 ~G~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 273 AGTAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCCHHHHHHHHHHhhcCCCEEEEECC
Confidence 9875432 23467777 67777776
No 400
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.75 E-value=0.043 Score=49.06 Aligned_cols=71 Identities=21% Similarity=0.275 Sum_probs=50.2
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---------------------------CCHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---------------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
.+|+|||+|.. |..++..|++.|.+|+++.|.. .+..+..+.+|+||-++..
T Consensus 3 mkI~IiGaGai-G~~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~ 81 (320)
T 3i83_A 3 LNILVIGTGAI-GSFYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV 81 (320)
T ss_dssp CEEEEESCCHH-HHHHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence 57999999886 9999999999999999987652 1122233479999999985
Q ss_pred CCc---c--cCCCcCCCcEEEEee
Q 024306 190 ANL---V--RGSWLKPGAVVLDVG 208 (269)
Q Consensus 190 p~~---i--~~~~~~~g~vViDv~ 208 (269)
... + -...++++++|+.+.
T Consensus 82 ~~~~~~l~~l~~~l~~~t~Iv~~~ 105 (320)
T 3i83_A 82 VEGADRVGLLRDAVAPDTGIVLIS 105 (320)
T ss_dssp CTTCCHHHHHTTSCCTTCEEEEEC
T ss_pred CChHHHHHHHHhhcCCCCEEEEeC
Confidence 332 1 123456677776653
No 401
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=95.74 E-value=0.0061 Score=52.52 Aligned_cols=54 Identities=19% Similarity=0.193 Sum_probs=44.0
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC------------------CHhhhcCCCCEEEeccCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~------------------~l~~~~~~aDiVIsAtg~ 189 (269)
.|+|+|.|++|.+|+.++..|.++|++|+++.|... .+.+.++..|+||+..+.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 368999999888999999999999999998876531 134567789999988774
No 402
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=95.74 E-value=0.01 Score=51.10 Aligned_cols=37 Identities=11% Similarity=0.082 Sum_probs=31.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++.+|+++|.|+++-+|+++++.|+++|++|.++.+.
T Consensus 4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence 4568999999998888999999999999999988554
No 403
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=95.74 E-value=0.012 Score=51.06 Aligned_cols=38 Identities=32% Similarity=0.289 Sum_probs=34.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||.++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 56899999999998888999999999999999998765
No 404
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=95.74 E-value=0.011 Score=50.44 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=34.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.+++.|+++|++|.++.|.
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999989999999999999999998765
No 405
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=95.73 E-value=0.0087 Score=51.28 Aligned_cols=70 Identities=20% Similarity=0.231 Sum_probs=52.8
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEE-EEEeCCC------CCHhhhc-CCCCEEEeccCCC-Cc-ccCCCcCCCcEEEEe
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATV-SIVHALT------KNPEQIT-SEADIVIAAAGVA-NL-VRGSWLKPGAVVLDV 207 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~V-ti~~~~t------~~l~~~~-~~aDiVIsAtg~p-~~-i~~~~~~~g~vViDv 207 (269)
+|.|||.|.+ |+.++..|.+.|.++ .++++.. .++.+.+ .++|+||.+++.. +. +-...++.|..|++.
T Consensus 2 ~vgiIG~G~m-G~~~~~~l~~~g~~lv~v~d~~~~~~~~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~~~l~~G~~vv~~ 80 (236)
T 2dc1_A 2 LVGLIGYGAI-GKFLAEWLERNGFEIAAILDVRGEHEKMVRGIDEFLQREMDVAVEAASQQAVKDYAEKILKAGIDLIVL 80 (236)
T ss_dssp EEEEECCSHH-HHHHHHHHHHTTCEEEEEECSSCCCTTEESSHHHHTTSCCSEEEECSCHHHHHHHHHHHHHTTCEEEES
T ss_pred EEEEECCCHH-HHHHHHHHhcCCCEEEEEEecCcchhhhcCCHHHHhcCCCCEEEECCCHHHHHHHHHHHHHCCCcEEEE
Confidence 6899999876 999999998888886 6887653 2567777 6899999999832 21 223456788888886
Q ss_pred e
Q 024306 208 G 208 (269)
Q Consensus 208 ~ 208 (269)
.
T Consensus 81 ~ 81 (236)
T 2dc1_A 81 S 81 (236)
T ss_dssp C
T ss_pred C
Confidence 5
No 406
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=95.73 E-value=0.012 Score=50.80 Aligned_cols=38 Identities=29% Similarity=0.411 Sum_probs=34.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|++++..|+++|++|.++.|.
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 45 (263)
T 3ak4_A 8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLD 45 (263)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999889999999999999999998765
No 407
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=95.73 E-value=0.011 Score=51.40 Aligned_cols=40 Identities=20% Similarity=0.232 Sum_probs=35.0
Q ss_pred hCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 130 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 130 ~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
...+++||+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467899999999999889999999999999999998765
No 408
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.73 E-value=0.0075 Score=57.54 Aligned_cols=71 Identities=13% Similarity=0.245 Sum_probs=52.9
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------CCHhhhcC---CCCEEEeccCCCC-
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------KNPEQITS---EADIVIAAAGVAN- 191 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------------~~l~~~~~---~aDiVIsAtg~p~- 191 (269)
+|.|||.|.+ |.+++..|++.|.+|++++|+. .++.+.++ .+|+||.+++.+.
T Consensus 3 kIgVIG~G~m-G~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 3 DVGVVGLGVM-GANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp SEEEECCSHH-HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred EEEEEChHHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 6999999886 9999999999999999998752 12334444 4999999998742
Q ss_pred c---cc--CCCcCCCcEEEEeee
Q 024306 192 L---VR--GSWLKPGAVVLDVGT 209 (269)
Q Consensus 192 ~---i~--~~~~~~g~vViDv~~ 209 (269)
. +. ...++++.+|||++.
T Consensus 82 v~~vl~~l~~~l~~g~iIId~sn 104 (478)
T 1pgj_A 82 TDSTIEQLKKVFEKGDILVDTGN 104 (478)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCC
T ss_pred HHHHHHHHHhhCCCCCEEEECCC
Confidence 1 21 124678899999863
No 409
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=95.72 E-value=0.009 Score=51.24 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=35.4
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
..+++||+++|.|+++-+|+.+++.|+++|++|.++.|+.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 49 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS 49 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3457899999999988899999999999999999987753
No 410
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=95.71 E-value=0.012 Score=52.24 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=30.1
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
+|+|+|.|++|.+|+.++..|.++|++|+++.|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 578999999888999999999999999998865
No 411
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=95.70 E-value=0.011 Score=51.49 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=30.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+|+|+|-|+++-+|+++|+.|+++|++|.++.++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4889999988778999999999999999999875
No 412
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=95.70 E-value=0.012 Score=50.75 Aligned_cols=37 Identities=24% Similarity=0.171 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999888999999999999999998765
No 413
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=95.70 E-value=0.012 Score=50.88 Aligned_cols=37 Identities=32% Similarity=0.340 Sum_probs=34.2
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999999999775
No 414
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.70 E-value=0.022 Score=51.65 Aligned_cols=55 Identities=25% Similarity=0.314 Sum_probs=43.0
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC-------------------------CCHhhhcCCCCEEEeccC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------------KNPEQITSEADIVIAAAG 188 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t-------------------------~~l~~~~~~aDiVIsAtg 188 (269)
+.++|.|||+|.+ |.+++..|+..+. +|.+++... .+..+.+++||+||.++|
T Consensus 4 ~~~kI~iiGaG~v-G~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 4 ARKKITLVGAGNI-GGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAG 82 (321)
T ss_dssp CCCEEEEECCSHH-HHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCC
Confidence 4578999999775 9999999998886 888885431 012467899999999998
Q ss_pred CC
Q 024306 189 VA 190 (269)
Q Consensus 189 ~p 190 (269)
.|
T Consensus 83 ~p 84 (321)
T 3p7m_A 83 VP 84 (321)
T ss_dssp CC
T ss_pred cC
Confidence 65
No 415
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=95.69 E-value=0.011 Score=52.60 Aligned_cols=53 Identities=21% Similarity=0.337 Sum_probs=42.7
Q ss_pred ceEEEEcCCcccHHHHHHHHHhC--CCEEEEEeCCCC--------------------------CHhhhcCCCCEEEeccC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALTK--------------------------NPEQITSEADIVIAAAG 188 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~--ga~Vti~~~~t~--------------------------~l~~~~~~aDiVIsAtg 188 (269)
++|+|.|++|.+|+.++..|.++ |++|+++.|... .+.+.++.+|+||...+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 84 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA 84 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence 68999999999999999999998 789998876420 12356678899998887
Q ss_pred C
Q 024306 189 V 189 (269)
Q Consensus 189 ~ 189 (269)
.
T Consensus 85 ~ 85 (348)
T 1oc2_A 85 E 85 (348)
T ss_dssp C
T ss_pred c
Confidence 4
No 416
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.69 E-value=0.016 Score=52.71 Aligned_cols=77 Identities=18% Similarity=0.161 Sum_probs=54.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCCC---------------------CHhhhcC-----CCCEEEec
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK---------------------NPEQITS-----EADIVIAA 186 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t~---------------------~l~~~~~-----~aDiVIsA 186 (269)
-.|++|+|+|+|+ +|..+++++...|+ +|+.+.+... ++.+.++ .+|+||++
T Consensus 189 ~~g~~VlV~GaG~-vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~ 267 (373)
T 2fzw_A 189 EPGSVCAVFGLGG-VGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFEC 267 (373)
T ss_dssp CTTCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEEC
Confidence 4689999999866 59999999999999 7887754321 1222221 48999999
Q ss_pred cCCCCcc--cCCCcCCC-cEEEEeeecC
Q 024306 187 AGVANLV--RGSWLKPG-AVVLDVGTCP 211 (269)
Q Consensus 187 tg~p~~i--~~~~~~~g-~vViDv~~~~ 211 (269)
+|.+..+ .-+.++++ -.++.++...
T Consensus 268 ~g~~~~~~~~~~~l~~~~G~iv~~G~~~ 295 (373)
T 2fzw_A 268 IGNVKVMRAALEACHKGWGVSVVVGVAA 295 (373)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEECSCCC
T ss_pred CCcHHHHHHHHHhhccCCcEEEEEecCC
Confidence 9875432 23467887 7777888543
No 417
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.69 E-value=0.012 Score=53.41 Aligned_cols=52 Identities=10% Similarity=0.135 Sum_probs=43.2
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC---------------------------------------CCCHhhh
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---------------------------------------TKNPEQI 176 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~---------------------------------------t~~l~~~ 176 (269)
-++|.|||+|-+ |+.+|..++..|.+|++.... +.++.+.
T Consensus 6 ~~~VaViGaG~M-G~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 6 AGDVLIVGSGLV-GRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHH-HHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCeEEEECCcHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 468999999886 999999999999999999543 1245678
Q ss_pred cCCCCEEEeccC
Q 024306 177 TSEADIVIAAAG 188 (269)
Q Consensus 177 ~~~aDiVIsAtg 188 (269)
+++||+||-|+.
T Consensus 85 ~~~ad~ViEav~ 96 (319)
T 3ado_A 85 VEGVVHIQECVP 96 (319)
T ss_dssp TTTEEEEEECCC
T ss_pred hccCcEEeeccc
Confidence 899999998886
No 418
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=95.69 E-value=0.01 Score=50.30 Aligned_cols=38 Identities=24% Similarity=0.301 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+.+++.|+++|++|+++.|.
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999999999999999999999999998765
No 419
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=95.68 E-value=0.013 Score=51.87 Aligned_cols=36 Identities=25% Similarity=0.146 Sum_probs=30.9
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
-.+++|+|.|++|.+|+.++..|.++|++|+++.|.
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 468899999999999999999999999999998775
No 420
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=95.68 E-value=0.015 Score=51.26 Aligned_cols=53 Identities=15% Similarity=0.195 Sum_probs=42.0
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcC--CCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITS--EADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------~l~~~~~--~aDiVIsAtg~ 189 (269)
++|+|.|++|.+|+.++..|.++|++|+++.|... .+.+.++ ..|+||...+.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~ 77 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAAD 77 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 57999999999999999999999999998876421 1234455 78999988774
No 421
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=95.68 E-value=0.0081 Score=50.10 Aligned_cols=70 Identities=16% Similarity=0.191 Sum_probs=50.2
Q ss_pred eEEEEc-CCcccHHHHHHHHHhCCCEEEEEeCCCC---------------------CHhhhcCCCCEEEeccCCCC---c
Q 024306 138 NAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAGVAN---L 192 (269)
Q Consensus 138 ~v~ViG-~gg~vg~~~a~~L~~~ga~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~p~---~ 192 (269)
+++|+| +|. +|++++..|.+.|.+|++++|+.. ++.+.++++|+||.+++... .
T Consensus 2 ~i~iiGa~G~-~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~~~~~~~ 80 (212)
T 1jay_A 2 RVALLGGTGN-LGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDT 80 (212)
T ss_dssp EEEEETTTSH-HHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHH
T ss_pred eEEEEcCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCChhhHHHH
Confidence 689999 655 599999999999999999987521 12344677999999998422 1
Q ss_pred cc--CCCcCCCcEEEEeee
Q 024306 193 VR--GSWLKPGAVVLDVGT 209 (269)
Q Consensus 193 i~--~~~~~~g~vViDv~~ 209 (269)
+. ...+ ++.+++|+..
T Consensus 81 ~~~l~~~~-~~~~vi~~~~ 98 (212)
T 1jay_A 81 ARDLKNIL-REKIVVSPLV 98 (212)
T ss_dssp HHHTHHHH-TTSEEEECCC
T ss_pred HHHHHHHc-CCCEEEEcCC
Confidence 11 0123 4889999874
No 422
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=95.67 E-value=0.013 Score=52.35 Aligned_cols=54 Identities=19% Similarity=0.157 Sum_probs=43.4
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCC-----CEEEEEeCCCC--------------------CHhhhcCC---CCEEEecc
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHH-----ATVSIVHALTK--------------------NPEQITSE---ADIVIAAA 187 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~g-----a~Vti~~~~t~--------------------~l~~~~~~---aDiVIsAt 187 (269)
|++|+|.|++|.+|+.++..|.++| .+|+++.|... .+.+.++. .|+||..+
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a 80 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT 80 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence 5789999999999999999999999 89998876421 13355666 89999887
Q ss_pred CC
Q 024306 188 GV 189 (269)
Q Consensus 188 g~ 189 (269)
+.
T Consensus 81 ~~ 82 (364)
T 2v6g_A 81 WA 82 (364)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 423
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.67 E-value=0.0065 Score=52.57 Aligned_cols=53 Identities=9% Similarity=0.080 Sum_probs=42.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhC--CCEEEEEeCCCC---------------------CHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALTK---------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~--ga~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~ 189 (269)
|+|+|.|++|.+|+.++..|.++ |++|+++.|... ++.+.++++|+||..++.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 57999999888999999999998 889999877532 134566778999977763
No 424
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=95.67 E-value=0.012 Score=50.39 Aligned_cols=37 Identities=27% Similarity=0.326 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 5789999999998888999999999999999998765
No 425
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.67 E-value=0.021 Score=52.05 Aligned_cols=55 Identities=18% Similarity=0.420 Sum_probs=43.2
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCC-------------------------CCCHhhhcCCCCEEEec
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHAL-------------------------TKNPEQITSEADIVIAA 186 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~-------------------------t~~l~~~~~~aDiVIsA 186 (269)
...++|.|||+|.+ |.++++.|+.+|. ++.+++.. +.+. +.+++||+||.+
T Consensus 17 ~~~~kV~ViGaG~v-G~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~aDiVvi~ 94 (331)
T 4aj2_A 17 VPQNKITVVGVGAV-GMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANSKLVIIT 94 (331)
T ss_dssp CCSSEEEEECCSHH-HHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTEEEEEEC
T ss_pred CCCCEEEEECCCHH-HHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCCCEEEEc
Confidence 46789999999765 9999999998885 68888543 1222 468999999999
Q ss_pred cCCC
Q 024306 187 AGVA 190 (269)
Q Consensus 187 tg~p 190 (269)
.|.|
T Consensus 95 aG~~ 98 (331)
T 4aj2_A 95 AGAR 98 (331)
T ss_dssp CSCC
T ss_pred cCCC
Confidence 9864
No 426
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=95.66 E-value=0.012 Score=50.31 Aligned_cols=37 Identities=24% Similarity=0.214 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++++|+++|.|+++-+|+.++..|+++|++|+++.|.
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999989999999999999999998765
No 427
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=95.65 E-value=0.012 Score=50.50 Aligned_cols=37 Identities=22% Similarity=0.224 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998888999999999999999998765
No 428
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=95.65 E-value=0.011 Score=51.59 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=34.8
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|.
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998888999999999999999999876
No 429
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.65 E-value=0.015 Score=55.54 Aligned_cols=74 Identities=23% Similarity=0.411 Sum_probs=53.3
Q ss_pred ceEEEEcCCcccHHHHHHHHHhC--CCEEEEEeCCC---------------C------------------CHhhhcCCCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALT---------------K------------------NPEQITSEAD 181 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~--ga~Vti~~~~t---------------~------------------~l~~~~~~aD 181 (269)
.+|.|||.|.+ |.++|..|++. |.+|++++++. + ++.+.+++||
T Consensus 10 mkI~VIG~G~v-G~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aD 88 (481)
T 2o3j_A 10 SKVVCVGAGYV-GGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEAD 88 (481)
T ss_dssp CEEEEECCSTT-HHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred CEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCC
Confidence 48999999886 99999999998 67999997641 1 1234467899
Q ss_pred EEEeccCCCCc--------------cc------CCCcCCCcEEEEeeecC
Q 024306 182 IVIAAAGVANL--------------VR------GSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 182 iVIsAtg~p~~--------------i~------~~~~~~g~vViDv~~~~ 211 (269)
+||.+++.|.- +. ...++++++|+|....+
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 138 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVP 138 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 99999886521 11 12357789999865443
No 430
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=95.65 E-value=0.013 Score=50.23 Aligned_cols=37 Identities=16% Similarity=0.226 Sum_probs=33.6
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIE 38 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3679999999998888999999999999999998775
No 431
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=95.64 E-value=0.012 Score=50.57 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=34.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++||+++|.|+++-+|++++..|+++|++|.++.|+.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP 40 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 46899999999998889999999999999999987753
No 432
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=95.64 E-value=0.013 Score=50.24 Aligned_cols=37 Identities=30% Similarity=0.346 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARR 40 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4789999999999888999999999999999998775
No 433
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.64 E-value=0.0086 Score=54.60 Aligned_cols=94 Identities=16% Similarity=0.154 Sum_probs=60.1
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCCC-------------------CCHhh
Q 024306 116 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQ 175 (269)
Q Consensus 116 ~p~t~~g~~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~t-------------------~~l~~ 175 (269)
+||...-++..+.+..---.|++|+|+|+|+ +|..+++++...|+ .|+.+.+.. .++.+
T Consensus 171 l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~-vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~ 249 (371)
T 1f8f_A 171 LGCGIQTGAGACINALKVTPASSFVTWGAGA-VGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVA 249 (371)
T ss_dssp GGTHHHHHHHHHHTTTCCCTTCEEEEESCSH-HHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHH
T ss_pred hcchHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHH
Confidence 3444334444553222223689999999866 59999999988999 677775431 12222
Q ss_pred hcC-----CCCEEEeccCCCCcc--cCCCcCCCcEEEEeeec
Q 024306 176 ITS-----EADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 176 ~~~-----~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~ 210 (269)
.++ .+|+||+++|.+..+ .-+.++++-.++.++..
T Consensus 250 ~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 250 AIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp HHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCC
T ss_pred HHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCC
Confidence 221 479999999875432 23467777777778764
No 434
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.64 E-value=0.01 Score=51.39 Aligned_cols=38 Identities=21% Similarity=0.371 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899999999998888999999999999999998765
No 435
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=95.63 E-value=0.013 Score=51.25 Aligned_cols=38 Identities=21% Similarity=0.174 Sum_probs=34.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999998888999999999999999998765
No 436
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=95.63 E-value=0.011 Score=50.34 Aligned_cols=37 Identities=19% Similarity=0.280 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++||+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 4789999999998888999999999999999998765
No 437
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=95.63 E-value=0.01 Score=50.49 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=34.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+.++..|+++|++|+++.|.
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35789999999998889999999999999999998765
No 438
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=95.61 E-value=0.013 Score=51.05 Aligned_cols=38 Identities=21% Similarity=0.352 Sum_probs=34.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|.
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 35789999999998888999999999999999998874
No 439
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.61 E-value=0.031 Score=50.33 Aligned_cols=120 Identities=16% Similarity=0.065 Sum_probs=66.3
Q ss_pred cceEEEEcCCcccHHH-HHHHHHhCCCEEEEEeCCCC-CHhhhcCCCCEEEeccCCCCcccCCCcC---CCcEEEEeeec
Q 024306 136 GKNAVVIGRSNIVGLP-TSLLLQRHHATVSIVHALTK-NPEQITSEADIVIAAAGVANLVRGSWLK---PGAVVLDVGTC 210 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~-~a~~L~~~ga~Vti~~~~t~-~l~~~~~~aDiVIsAtg~p~~i~~~~~~---~g~vViDv~~~ 210 (269)
.|++.|||.|++ |.+ +|++|.++|++|++++++.. ...+.+++..+-+. .|. .++.+. ...+|+--+++
T Consensus 4 ~~~i~~iGiGg~-Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~-~g~----~~~~l~~~~~d~vV~Spgi~ 77 (326)
T 3eag_A 4 MKHIHIIGIGGT-FMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVY-EGF----DAAQLDEFKADVYVIGNVAK 77 (326)
T ss_dssp CCEEEEESCCSH-HHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEE-ESC----CGGGGGSCCCSEEEECTTCC
T ss_pred CcEEEEEEECHH-HHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEE-CCC----CHHHcCCCCCCEEEECCCcC
Confidence 478999999998 995 89999999999999987642 22222332222221 111 111111 12333333333
Q ss_pred CCCCCC----CCCCceeecccchHH-HhhHcceecccCCcccHHHHHHHHHHHHHHH
Q 024306 211 PVDDPS----CEYGYRLMGDVCYEE-AMRLASVITPVPGGVGPMTVAMLLSNTLDSA 262 (269)
Q Consensus 211 ~~~~~~----~~~~~~l~GDvd~~~-~~~~~~~~tpvpgGvGp~T~~mLl~n~v~a~ 262 (269)
+.. |. ...|-++++++++-. ...+...+.-|-|--|.=|+..|+.+++++.
T Consensus 78 ~~~-p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~ 133 (326)
T 3eag_A 78 RGM-DVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYA 133 (326)
T ss_dssp TTC-HHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred CCC-HHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHc
Confidence 211 00 001225677665321 1111222334568889999999999988764
No 440
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=95.61 E-value=0.014 Score=50.25 Aligned_cols=38 Identities=24% Similarity=0.265 Sum_probs=33.4
Q ss_pred CCCccceEEEEcCCcc--cHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNI--VGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~--vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|++|. +|+++++.|+++|++|.++.|.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 4688999999999865 7999999999999999988654
No 441
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.60 E-value=0.023 Score=53.45 Aligned_cols=53 Identities=21% Similarity=0.306 Sum_probs=44.5
Q ss_pred cccCCHHHHHHH----HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE-EEeC
Q 024306 115 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHA 168 (269)
Q Consensus 115 ~~p~t~~g~~~~----l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vt-i~~~ 168 (269)
..+.|++|++.. +++.+.+++||+|+|.|.|++ |..+++.|.+.|++|. ++++
T Consensus 193 r~~aTg~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnV-G~~~a~~L~~~GakVVavsD~ 250 (419)
T 3aoe_E 193 RDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQV-GAAVALHAERLGMRVVAVATS 250 (419)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEEET
T ss_pred CccchHHHHHHHHHHHHHhcCCCccCCEEEEECcCHH-HHHHHHHHHHCCCEEEEEEcC
Confidence 346799987655 456789999999999999885 9999999999999966 7766
No 442
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=95.60 E-value=0.013 Score=50.17 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=34.4
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++||+++|.|+++-+|++++..|+++|++|.++.|+.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 47899999999998899999999999999999987764
No 443
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=95.60 E-value=0.013 Score=50.39 Aligned_cols=37 Identities=32% Similarity=0.357 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRN 40 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999999998775
No 444
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=95.60 E-value=0.013 Score=50.83 Aligned_cols=38 Identities=11% Similarity=0.190 Sum_probs=34.9
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++++|+++|.|+++-+|+.++..|+++|++|+++.|.
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 56899999999999989999999999999999998775
No 445
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=95.60 E-value=0.011 Score=51.27 Aligned_cols=38 Identities=26% Similarity=0.237 Sum_probs=34.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
+++||+++|.|+++-+|+.++..|+++|++|+++.|..
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 68 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSH 68 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999998899999999999999999987754
No 446
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=95.59 E-value=0.0059 Score=52.89 Aligned_cols=35 Identities=26% Similarity=0.244 Sum_probs=31.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEE-eCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV-HAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~-~~~ 169 (269)
+||+++|.|+++-+|+++++.|+++|++|.++ .|.
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~ 38 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARS 38 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 68999999998888999999999999998886 544
No 447
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.59 E-value=0.0074 Score=55.27 Aligned_cols=86 Identities=28% Similarity=0.362 Sum_probs=58.7
Q ss_pred HHHHHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC-------------------CCCHhhhcC-----
Q 024306 124 IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL-------------------TKNPEQITS----- 178 (269)
Q Consensus 124 ~~~l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~-------------------t~~l~~~~~----- 178 (269)
+..++..++ -.|++|+|+|+|+ ||..+++++...|+ +|+++.+. ..++.+.++
T Consensus 172 ~~~l~~~~~-~~g~~VlV~GaG~-vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~ 249 (370)
T 4ej6_A 172 LHGVDLSGI-KAGSTVAILGGGV-IGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGL 249 (370)
T ss_dssp HHHHHHHTC-CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSS
T ss_pred HHHHHhcCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhc
Confidence 444544443 3689999999966 59999999999999 78777443 123333333
Q ss_pred ---CCCEEEeccCCCCcc--cCCCcCCCcEEEEeeecC
Q 024306 179 ---EADIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 179 ---~aDiVIsAtg~p~~i--~~~~~~~g~vViDv~~~~ 211 (269)
.+|+||+++|.+..+ .-+.++++-.++.+|...
T Consensus 250 ~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~ 287 (370)
T 4ej6_A 250 VPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLP 287 (370)
T ss_dssp STTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCC
T ss_pred cCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccC
Confidence 489999999965433 233577777777888654
No 448
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=95.58 E-value=0.011 Score=50.28 Aligned_cols=37 Identities=24% Similarity=0.281 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.+++.|+++|++|+++.|.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999999999999999999999998765
No 449
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=95.58 E-value=0.014 Score=50.51 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=30.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEe
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH 167 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~ 167 (269)
++.+|+++|.|+++-+|+.+++.|+++|++|.++.
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~ 57 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHY 57 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 46899999999988889999999999999987754
No 450
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.58 E-value=0.011 Score=51.26 Aligned_cols=52 Identities=12% Similarity=0.066 Sum_probs=43.1
Q ss_pred eEEEEcCCcccHHHHHHHHHhC-CCEEEEEeCCC---------------------CCHhhhcCCCCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALT---------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~-ga~Vti~~~~t---------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
+|+|.|++|.+|+.++..|.++ |++|+++.|.. .++.+.++.+|+||...+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 6999999988999999999998 88999987752 1245678899999988874
No 451
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=95.57 E-value=0.011 Score=50.87 Aligned_cols=37 Identities=27% Similarity=0.357 Sum_probs=33.3
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.+++.|+++|++|.++.|.
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3679999999998888999999999999999988764
No 452
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=95.57 E-value=0.01 Score=51.84 Aligned_cols=54 Identities=13% Similarity=0.169 Sum_probs=43.0
Q ss_pred cceEEEEcCCcccHHHHHHHHHhC--CCEEEEEeCCCC-------------------CHhhhcC--CCCEEEeccCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALTK-------------------NPEQITS--EADIVIAAAGV 189 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~--ga~Vti~~~~t~-------------------~l~~~~~--~aDiVIsAtg~ 189 (269)
+++|+|.|++|.+|+.++..|.++ |++|+++.|... ++.+.++ ..|+||...+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~ 78 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL 78 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 578999999898999999999998 889998876531 1234455 78999988774
No 453
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=95.56 E-value=0.014 Score=50.48 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.+++.|+++|++|.++.|+
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999889999999999999999998765
No 454
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=95.56 E-value=0.014 Score=50.74 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=33.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.+.
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 5789999999998888999999999999999998654
No 455
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=95.56 E-value=0.012 Score=50.36 Aligned_cols=37 Identities=19% Similarity=0.243 Sum_probs=33.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDIN 39 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4689999999998888999999999999999998775
No 456
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.54 E-value=0.017 Score=51.65 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=41.5
Q ss_pred ceEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCC-------------------------CCHhhhcCCCCEEEeccCC
Q 024306 137 KNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT-------------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 137 k~v~ViG~gg~vg~~~a~~L~~~g--a~Vti~~~~t-------------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
++|.|||+|.+ |.+++..|+..| .+|+++++.. .++ +.+++||+||.+++.
T Consensus 2 ~kI~VIGaG~~-G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~ 79 (309)
T 1hyh_A 2 RKIGIIGLGNV-GAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGN 79 (309)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCC
Confidence 47999998775 999999999988 6899986642 122 456789999999986
Q ss_pred CC
Q 024306 190 AN 191 (269)
Q Consensus 190 p~ 191 (269)
|.
T Consensus 80 ~~ 81 (309)
T 1hyh_A 80 IK 81 (309)
T ss_dssp GG
T ss_pred cc
Confidence 44
No 457
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=95.53 E-value=0.013 Score=50.90 Aligned_cols=37 Identities=19% Similarity=0.112 Sum_probs=33.8
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~ 65 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCART 65 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 4689999999999989999999999999999998775
No 458
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=95.53 E-value=0.015 Score=50.29 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|++++..|+++|++|.++.|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999888999999999999999998765
No 459
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=95.53 E-value=0.0078 Score=53.64 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=29.5
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~g--a~Vti~~~~ 169 (269)
..++++|+|.|++|.+|+.++..|.++| .+|+...+.
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 3578999999999999999999999999 567766543
No 460
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=95.53 E-value=0.011 Score=51.43 Aligned_cols=35 Identities=31% Similarity=0.226 Sum_probs=30.1
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
++||.++|.|+++-+|++++..|+++|++|.++.+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYA 59 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEES
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 57999999999888899999999999999988743
No 461
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=95.52 E-value=0.012 Score=50.59 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=34.5
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999999889999999999999999998775
No 462
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.51 E-value=0.0032 Score=57.00 Aligned_cols=76 Identities=22% Similarity=0.138 Sum_probs=51.6
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC-----------------CCHhhh----c--CCCCEEEeccCCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------KNPEQI----T--SEADIVIAAAGVA 190 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t-----------------~~l~~~----~--~~aDiVIsAtg~p 190 (269)
-.|++|+|+|++|.+|..+++++...|++|+.+ ++. .++.+. + +.+|+||+++|.+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vid~~g~~ 227 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGP 227 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEEESSCTH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEEECCCcH
Confidence 369999999965667999999999999998777 321 122221 1 3589999999864
Q ss_pred Cc-ccCCCcCCCcEEEEeeec
Q 024306 191 NL-VRGSWLKPGAVVLDVGTC 210 (269)
Q Consensus 191 ~~-i~~~~~~~g~vViDv~~~ 210 (269)
.+ -.-+.++++-.++.++..
T Consensus 228 ~~~~~~~~l~~~G~iv~~g~~ 248 (343)
T 3gaz_A 228 VLDASFSAVKRFGHVVSCLGW 248 (343)
T ss_dssp HHHHHHHHEEEEEEEEESCCC
T ss_pred HHHHHHHHHhcCCeEEEEccc
Confidence 32 123356776667666643
No 463
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=95.51 E-value=0.015 Score=50.82 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=34.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.+.
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH
Confidence 57899999999998888999999999999999988754
No 464
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=95.51 E-value=0.0089 Score=54.39 Aligned_cols=70 Identities=20% Similarity=0.283 Sum_probs=52.5
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----------------------------CCHhhhcCCCCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----------------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
+|.|||+|.+ |.+++..|++.|.+|++++++. .++.+.++++|+||.+++.
T Consensus 17 kI~iIG~G~m-G~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~ 95 (366)
T 1evy_A 17 KAVVFGSGAF-GTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT 95 (366)
T ss_dssp EEEEECCSHH-HHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH
T ss_pred eEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh
Confidence 7999999886 9999999999999999997652 1234557789999999984
Q ss_pred CC---cccC------CCcCC-CcEEEEee
Q 024306 190 AN---LVRG------SWLKP-GAVVLDVG 208 (269)
Q Consensus 190 p~---~i~~------~~~~~-g~vViDv~ 208 (269)
.. .+.. ..+++ +++|+|+.
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~ 124 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCT 124 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEEC
Confidence 22 2221 23566 88888886
No 465
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=95.51 E-value=0.012 Score=55.55 Aligned_cols=38 Identities=13% Similarity=0.107 Sum_probs=34.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhC---CCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRH---HATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~---ga~Vti~~~~ 169 (269)
...++++|+|.|++|.+|+.++..|.++ |++|+++.|.
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~ 109 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRA 109 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECS
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECC
Confidence 4568999999999999999999999998 8999998874
No 466
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=95.51 E-value=0.015 Score=50.17 Aligned_cols=38 Identities=26% Similarity=0.293 Sum_probs=34.3
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++++|+++|.|+++-+|+.+++.|+++|++|.++.|.
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 49 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA 49 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35789999999999889999999999999999998765
No 467
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.50 E-value=0.0099 Score=50.04 Aligned_cols=52 Identities=13% Similarity=0.140 Sum_probs=41.0
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCCC----------------------CHhh-hcCCCCEEEeccCCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------------NPEQ-ITSEADIVIAAAGVA 190 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t~----------------------~l~~-~~~~aDiVIsAtg~p 190 (269)
+|+|+|+|.. |+.++..|.++|.+|+++.+... .+.+ .+.+||+||.+++..
T Consensus 2 ~iiIiG~G~~-G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 76 (218)
T 3l4b_C 2 KVIIIGGETT-AYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD 76 (218)
T ss_dssp CEEEECCHHH-HHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH
T ss_pred EEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc
Confidence 6899999775 99999999999999999976521 1222 367899999999853
No 468
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.50 E-value=0.038 Score=43.73 Aligned_cols=55 Identities=11% Similarity=0.085 Sum_probs=44.5
Q ss_pred CccceEEEEcC----CcccHHHHHHHHHhCCCEEEEEeCCC---------CCHhhhcCCCCEEEeccCC
Q 024306 134 IMGKNAVVIGR----SNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 134 l~gk~v~ViG~----gg~vg~~~a~~L~~~ga~Vti~~~~t---------~~l~~~~~~aDiVIsAtg~ 189 (269)
++.++|.|||+ |.+ |++++..|.+.|.+|+..+.+. +++.+.....|++|.+++.
T Consensus 12 ~~p~~IavIGaS~~~g~~-G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp~ 79 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKY-GNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPP 79 (138)
T ss_dssp --CCEEEEETCCSCTTSH-HHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSCH
T ss_pred cCCCeEEEEeecCCCCCH-HHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeCH
Confidence 46789999999 665 9999999999999988888753 3566667789999999984
No 469
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=95.49 E-value=0.015 Score=50.45 Aligned_cols=38 Identities=21% Similarity=0.210 Sum_probs=34.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|++++..|+++|++|.++.+.
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLC 46 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence 46899999999998888999999999999999988754
No 470
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.49 E-value=0.0094 Score=57.03 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=29.6
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
-++|.|||+|.+ |.++|..|++.|.+|++++++
T Consensus 5 ~~kVgVIGaG~M-G~~IA~~la~aG~~V~l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTM-GAGIAEVAASHGHQVLLYDIS 37 (483)
T ss_dssp CCCEEEECCSHH-HHHHHHHHHHTTCCEEEECSC
T ss_pred CCEEEEECcCHH-HHHHHHHHHHCCCeEEEEECC
Confidence 368999999886 999999999999999999765
No 471
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=95.48 E-value=0.015 Score=50.73 Aligned_cols=37 Identities=19% Similarity=0.261 Sum_probs=34.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999888999999999999999998775
No 472
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=95.48 E-value=0.013 Score=49.57 Aligned_cols=34 Identities=26% Similarity=0.330 Sum_probs=31.5
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEe
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH 167 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~ 167 (269)
++||+++|.|+++-+|+.++..|+++|++|.++.
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 6789999999999899999999999999999883
No 473
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=95.47 E-value=0.016 Score=50.51 Aligned_cols=38 Identities=24% Similarity=0.181 Sum_probs=34.6
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 42 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD 42 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999999889999999999999999998775
No 474
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=95.47 E-value=0.016 Score=50.61 Aligned_cols=37 Identities=19% Similarity=0.144 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|++++..|+++|++|.++.|.
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999989999999999999999998775
No 475
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=95.47 E-value=0.015 Score=50.87 Aligned_cols=37 Identities=24% Similarity=0.240 Sum_probs=34.0
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999999998775
No 476
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=95.46 E-value=0.012 Score=50.61 Aligned_cols=37 Identities=32% Similarity=0.346 Sum_probs=33.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.++..|+++|++|.++.|+
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998888999999999999999998765
No 477
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=95.44 E-value=0.017 Score=50.09 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=31.1
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
+++|.++|.|+++-+|+.+++.|+++|++|.++.+
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~ 57 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHS 57 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 57899999999888899999999999999988864
No 478
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=95.44 E-value=0.028 Score=51.51 Aligned_cols=76 Identities=21% Similarity=0.275 Sum_probs=52.4
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCC---CEEEEEeCCCC----------CH------hhhcCCCCEEEeccCCC--Cccc
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALTK----------NP------EQITSEADIVIAAAGVA--NLVR 194 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~g---a~Vti~~~~t~----------~l------~~~~~~aDiVIsAtg~p--~~i~ 194 (269)
|-+|.|+|+.|.+|.-+.++|.++. .++..+.+... ++ .+.+.++|+||.|+|.- .-+-
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~a 80 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQA 80 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCCTTCSEEEECSCHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCCHHHhccCCEEEECCChHHHHHHH
Confidence 4579999999999999999999874 24555543321 11 12357899999999841 1122
Q ss_pred CCCcCCCcEEEEeeecC
Q 024306 195 GSWLKPGAVVLDVGTCP 211 (269)
Q Consensus 195 ~~~~~~g~vViDv~~~~ 211 (269)
+..++.|+.|||.....
T Consensus 81 ~~~~~~G~~vID~Sa~~ 97 (344)
T 3tz6_A 81 PRFAAAGVTVIDNSSAW 97 (344)
T ss_dssp HHHHHTTCEEEECSSTT
T ss_pred HHHHhCCCEEEECCCcc
Confidence 33456799999999764
No 479
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.44 E-value=0.019 Score=51.76 Aligned_cols=75 Identities=13% Similarity=0.080 Sum_probs=52.2
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC------------------CCHhhhc-----CCCCEEEeccCCCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------KNPEQIT-----SEADIVIAAAGVAN 191 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t------------------~~l~~~~-----~~aDiVIsAtg~p~ 191 (269)
.|++|+|+|++|.+|..+++++...|++|+.+.++. .++.+.+ +..|+||+++|.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~ 229 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDM 229 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchH
Confidence 699999997666679999999999999988886642 1222222 24799999998654
Q ss_pred ccc--CCCcCCCcEEEEeee
Q 024306 192 LVR--GSWLKPGAVVLDVGT 209 (269)
Q Consensus 192 ~i~--~~~~~~g~vViDv~~ 209 (269)
.+. -+.++++-.++.++.
T Consensus 230 ~~~~~~~~l~~~G~iv~~~~ 249 (346)
T 3fbg_A 230 YYDDMIQLVKPRGHIATIVA 249 (346)
T ss_dssp HHHHHHHHEEEEEEEEESSC
T ss_pred HHHHHHHHhccCCEEEEECC
Confidence 322 245677666666653
No 480
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=95.43 E-value=0.016 Score=50.87 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=33.9
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999999999999999998765
No 481
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.42 E-value=0.021 Score=51.53 Aligned_cols=71 Identities=17% Similarity=0.238 Sum_probs=52.3
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC--------------------------CCHhhhcCCCCEEEeccCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t--------------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
..+|+|||+|.+ |.+++..|++.|.+|+++.|.. .+..+ +..+|+||.+++.
T Consensus 3 ~mkI~IiGaG~~-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAV-GGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHH-HHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHH-HHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 368999999876 9999999999999999997631 12333 5789999999985
Q ss_pred CCc---cc--CCCcCCCcEEEEee
Q 024306 190 ANL---VR--GSWLKPGAVVLDVG 208 (269)
Q Consensus 190 p~~---i~--~~~~~~g~vViDv~ 208 (269)
+.. +. ...++++++|+.+.
T Consensus 81 ~~~~~~~~~l~~~l~~~~~iv~~~ 104 (335)
T 3ghy_A 81 PALESVAAGIAPLIGPGTCVVVAM 104 (335)
T ss_dssp HHHHHHHGGGSSSCCTTCEEEECC
T ss_pred hhHHHHHHHHHhhCCCCCEEEEEC
Confidence 321 11 23467788888765
No 482
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.41 E-value=0.026 Score=50.59 Aligned_cols=51 Identities=29% Similarity=0.486 Sum_probs=39.6
Q ss_pred eEEEEcCCcccHHHHHHHHHhC--CCEEEEEeCCC--------------------------CCHhhhcCCCCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALT--------------------------KNPEQITSEADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~--ga~Vti~~~~t--------------------------~~l~~~~~~aDiVIsAtg~ 189 (269)
+|.|||+|. +|.+++..|+.. +.+|+++.+.. .++.+ +++||+||.++|.
T Consensus 2 kI~VIGaG~-vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 2 KITVIGAGN-VGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp EEEEECCSH-HHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred EEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 699999966 599999999885 67899986542 12333 7889999999986
Q ss_pred C
Q 024306 190 A 190 (269)
Q Consensus 190 p 190 (269)
|
T Consensus 80 p 80 (310)
T 1guz_A 80 P 80 (310)
T ss_dssp C
T ss_pred C
Confidence 5
No 483
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=95.41 E-value=0.014 Score=49.67 Aligned_cols=37 Identities=27% Similarity=0.223 Sum_probs=33.7
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.+++.|+++|++|.++.|.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATS 38 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998888999999999999999988765
No 484
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.40 E-value=0.011 Score=53.72 Aligned_cols=74 Identities=18% Similarity=0.217 Sum_probs=53.9
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC---CCHh----------------hhc----CCCCEEEeccCCCCc
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---KNPE----------------QIT----SEADIVIAAAGVANL 192 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t---~~l~----------------~~~----~~aDiVIsAtg~p~~ 192 (269)
|++|+|+|+|+ +|..+++++..+|++|+++.+.. ..++ +.+ ..+|+||+++|.+..
T Consensus 181 g~~VlV~GaG~-vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 259 (366)
T 2cdc_A 181 CRKVLVVGTGP-IGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADVN 259 (366)
T ss_dssp TCEEEEESCHH-HHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCCTH
T ss_pred CCEEEEECCCH-HHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCChHH
Confidence 99999999955 69999999999999998887754 2211 011 247999999997644
Q ss_pred c-c--CCCcCCCcEEEEeeec
Q 024306 193 V-R--GSWLKPGAVVLDVGTC 210 (269)
Q Consensus 193 i-~--~~~~~~g~vViDv~~~ 210 (269)
+ . .+.++++-.++.++..
T Consensus 260 ~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 260 ILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp HHHHHGGGEEEEEEEEECSCC
T ss_pred HHHHHHHHHhcCCEEEEEecC
Confidence 3 2 3456777777777754
No 485
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.40 E-value=0.021 Score=51.67 Aligned_cols=55 Identities=29% Similarity=0.404 Sum_probs=44.0
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC-EEEEEeCC--C-------------------------CCHhhhcCCCCEEEec
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL--T-------------------------KNPEQITSEADIVIAA 186 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga-~Vti~~~~--t-------------------------~~l~~~~~~aDiVIsA 186 (269)
+.++|.|||+|.+ |.+++..|+..|. +|+++.+. . .+-.+.+++||+||.+
T Consensus 7 ~~~kv~ViGaG~v-G~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIia 85 (315)
T 3tl2_A 7 KRKKVSVIGAGFT-GATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVIT 85 (315)
T ss_dssp CCCEEEEECCSHH-HHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEe
Confidence 4678999999765 9999999999998 89998765 1 0113678999999999
Q ss_pred cCCC
Q 024306 187 AGVA 190 (269)
Q Consensus 187 tg~p 190 (269)
+|.|
T Consensus 86 ag~p 89 (315)
T 3tl2_A 86 AGIA 89 (315)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 9864
No 486
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.40 E-value=0.017 Score=52.68 Aligned_cols=54 Identities=19% Similarity=0.372 Sum_probs=42.1
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCC--EEEEEeCCC-------------------------CCHhhhcCCCCEEEecc
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------------KNPEQITSEADIVIAAA 187 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga--~Vti~~~~t-------------------------~~l~~~~~~aDiVIsAt 187 (269)
..++|.|||+|. ||.+++..|+..|. +|.+++... .++. .+++||+||.+.
T Consensus 20 ~~~kV~ViGaG~-vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-~~~daDiVIita 97 (330)
T 3ldh_A 20 SYNKITVVGCDA-VGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-VSAGSKLVVITA 97 (330)
T ss_dssp CCCEEEEESTTH-HHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-SCSSCSEEEECC
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-HhCCCCEEEEeC
Confidence 457899999966 59999999998885 788885431 2333 389999999998
Q ss_pred CCC
Q 024306 188 GVA 190 (269)
Q Consensus 188 g~p 190 (269)
|.|
T Consensus 98 G~p 100 (330)
T 3ldh_A 98 GAR 100 (330)
T ss_dssp SCC
T ss_pred CCC
Confidence 865
No 487
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=95.40 E-value=0.01 Score=51.60 Aligned_cols=51 Identities=16% Similarity=0.263 Sum_probs=41.4
Q ss_pred eEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC----C------CHhhhcCC--CCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----K------NPEQITSE--ADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t----~------~l~~~~~~--aDiVIsAtg~ 189 (269)
+|+|.|++|.+|+.++..|. +|++|+++.|.. - ++.+.+++ .|+||...+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~ 64 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAH 64 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEECccc
Confidence 69999999989999999999 899999998763 1 23455554 8999988874
No 488
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=95.39 E-value=0.011 Score=50.55 Aligned_cols=35 Identities=17% Similarity=0.136 Sum_probs=31.7
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++|+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 57899999998888999999999999999999876
No 489
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=95.38 E-value=0.013 Score=50.72 Aligned_cols=38 Identities=26% Similarity=0.289 Sum_probs=34.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.+++||+++|.|+++-+|+++++.|+++|++|.++.|+
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~ 43 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRR 43 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998888999999999999999998765
No 490
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=95.37 E-value=0.012 Score=51.77 Aligned_cols=39 Identities=23% Similarity=0.112 Sum_probs=30.9
Q ss_pred CCCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 131 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 131 ~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
..+++||+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 66 (281)
T 4dry_A 28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRR 66 (281)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 356899999999998888999999999999999998775
No 491
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=95.37 E-value=0.013 Score=50.42 Aligned_cols=37 Identities=27% Similarity=0.290 Sum_probs=33.4
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
++||+++|.|+++-+|+++++.|+++|++|.++.|+.
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 38 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD 38 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 6789999999988889999999999999999987653
No 492
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=95.37 E-value=0.019 Score=48.89 Aligned_cols=37 Identities=11% Similarity=0.122 Sum_probs=33.0
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 170 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~t 170 (269)
.++|+++|.|+++-+|+.+++.|+++|++|.++.|+.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVE 41 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 4789999999998899999999999999999988763
No 493
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=95.37 E-value=0.015 Score=51.45 Aligned_cols=55 Identities=16% Similarity=0.172 Sum_probs=41.8
Q ss_pred ccceEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCCC---------------------C------HhhhcCCCCEEEe
Q 024306 135 MGKNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALTK---------------------N------PEQITSEADIVIA 185 (269)
Q Consensus 135 ~gk~v~ViG~gg~vg~~~a~~L~~~g--a~Vti~~~~t~---------------------~------l~~~~~~aDiVIs 185 (269)
++++|+|.|++|.+|+.++..|.++| ++|+++.|... + +.+.+...|+||.
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 81 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH 81 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence 35789999998889999999999986 78988865320 1 2234467899998
Q ss_pred ccCC
Q 024306 186 AAGV 189 (269)
Q Consensus 186 Atg~ 189 (269)
..+.
T Consensus 82 ~A~~ 85 (336)
T 2hun_A 82 LAAE 85 (336)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8774
No 494
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=95.37 E-value=0.014 Score=50.19 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=34.4
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
.++++|+++|.|+++-+|+.+++.|+++|++|+++.|.
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN 47 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999889999999999999999998775
No 495
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=95.36 E-value=0.015 Score=49.79 Aligned_cols=37 Identities=22% Similarity=0.339 Sum_probs=33.1
Q ss_pred CCccceEEEEcCCcccHHHHHHHHHhCCCE-EEEEeCC
Q 024306 133 EIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHAL 169 (269)
Q Consensus 133 ~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~-Vti~~~~ 169 (269)
+++||+++|.|+++-+|+.++..|+++|++ |.++.|.
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~ 39 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRV 39 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecC
Confidence 468999999999888899999999999996 8888765
No 496
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=95.36 E-value=0.017 Score=49.79 Aligned_cols=36 Identities=28% Similarity=0.260 Sum_probs=33.1
Q ss_pred CccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeCC
Q 024306 134 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 169 (269)
Q Consensus 134 l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~~ 169 (269)
++||+++|.|+++-+|++++..|+++|++|.++.|+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECC
Confidence 678999999999889999999999999999998765
No 497
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=95.35 E-value=0.017 Score=50.33 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=34.0
Q ss_pred CCCccceEEEEcCCcccHHHHHHHHHhCCCEEEEEeC
Q 024306 132 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 168 (269)
Q Consensus 132 ~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vti~~~ 168 (269)
.+++||.++|.|+++-+|+++++.|+++|++|.++.+
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence 4689999999999888899999999999999999876
No 498
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.34 E-value=0.012 Score=50.72 Aligned_cols=52 Identities=6% Similarity=0.035 Sum_probs=40.7
Q ss_pred eEEEEcCCcccHHHHHHHHHhC--CCEEEEEeCCCC---------------------CHhhhcCCCCEEEeccCC
Q 024306 138 NAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALTK---------------------NPEQITSEADIVIAAAGV 189 (269)
Q Consensus 138 ~v~ViG~gg~vg~~~a~~L~~~--ga~Vti~~~~t~---------------------~l~~~~~~aDiVIsAtg~ 189 (269)
+|+|.|++|.+|+.++..|.++ |++|+++.|... ++.+.++.+|+||..++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 75 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSS 75 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 4899999888999999999998 889998876531 134567788999987763
No 499
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.34 E-value=0.021 Score=51.63 Aligned_cols=56 Identities=20% Similarity=0.445 Sum_probs=42.7
Q ss_pred cceEEEEcCCcccHHHHHHHHHhCC--CEEEEEeCCC-----------------------CCHhhhcCCCCEEEeccCCC
Q 024306 136 GKNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT-----------------------KNPEQITSEADIVIAAAGVA 190 (269)
Q Consensus 136 gk~v~ViG~gg~vg~~~a~~L~~~g--a~Vti~~~~t-----------------------~~l~~~~~~aDiVIsAtg~p 190 (269)
..+|+|+|++|.||.+++..|+.+| .+|+++.... .++.+.+++||+||.++|.|
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~ 87 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVP 87 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcC
Confidence 3589999976667999999999888 5788876321 12345689999999999865
Q ss_pred C
Q 024306 191 N 191 (269)
Q Consensus 191 ~ 191 (269)
.
T Consensus 88 ~ 88 (326)
T 1smk_A 88 R 88 (326)
T ss_dssp C
T ss_pred C
Confidence 3
No 500
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.33 E-value=0.03 Score=52.92 Aligned_cols=53 Identities=19% Similarity=0.276 Sum_probs=44.0
Q ss_pred cccCCHHHHHHH----HHHhCCCCccceEEEEcCCcccHHHHHHHHHhCCCEEE-EEeC
Q 024306 115 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHA 168 (269)
Q Consensus 115 ~~p~t~~g~~~~----l~~~~~~l~gk~v~ViG~gg~vg~~~a~~L~~~ga~Vt-i~~~ 168 (269)
..+.|++|++.. +++.+.+++|++|+|.|.|.+ |..+++.|.++|++|. ++.+
T Consensus 210 r~~aTg~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGnV-G~~~a~~L~e~GakvVavsD~ 267 (440)
T 3aog_A 210 RRDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGNV-GNAAARAFHDHGARVVAVQDH 267 (440)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTCCSTTCEEEEECCSHH-HHHHHHHHHHTTCEEEEEECS
T ss_pred CCcchHHHHHHHHHHHHHhcCCCccCCEEEEeccCHH-HHHHHHHHHHCCCEEEEEEcC
Confidence 346798987655 456789999999999999885 9999999999999965 7765
Done!