Query 024311
Match_columns 269
No_of_seqs 189 out of 2046
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 06:03:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024311.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024311hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bzb_A Uncharacterized protein 99.8 2.9E-19 9.9E-24 160.5 17.4 171 8-252 56-232 (281)
2 3g5l_A Putative S-adenosylmeth 99.5 3.3E-13 1.1E-17 117.5 15.5 134 33-256 42-215 (253)
3 3dlc_A Putative S-adenosyl-L-m 99.5 4E-13 1.4E-17 113.4 15.1 147 35-269 43-213 (219)
4 3p9n_A Possible methyltransfer 99.5 6.7E-13 2.3E-17 111.1 13.5 142 1-229 5-156 (189)
5 3dh0_A SAM dependent methyltra 99.5 4E-12 1.4E-16 108.0 18.1 145 35-267 37-190 (219)
6 3kkz_A Uncharacterized protein 99.5 1.9E-12 6.4E-17 114.0 16.3 134 34-254 45-193 (267)
7 3f4k_A Putative methyltransfer 99.5 3E-12 1E-16 111.4 17.4 150 14-253 28-192 (257)
8 3bus_A REBM, methyltransferase 99.4 5.6E-12 1.9E-16 110.8 18.6 151 14-254 44-213 (273)
9 1xxl_A YCGJ protein; structura 99.4 4.8E-12 1.6E-16 109.8 17.5 146 12-253 6-170 (239)
10 1nkv_A Hypothetical protein YJ 99.4 2.9E-12 1E-16 111.4 15.8 146 18-254 23-184 (256)
11 4hc4_A Protein arginine N-meth 99.4 7.3E-13 2.5E-17 124.1 11.3 104 32-223 80-186 (376)
12 3ujc_A Phosphoethanolamine N-m 99.4 3.7E-12 1.3E-16 110.9 15.1 149 12-254 36-203 (266)
13 3lcc_A Putative methyl chlorid 99.4 3.3E-12 1.1E-16 110.1 14.4 133 34-254 65-204 (235)
14 3lpm_A Putative methyltransfer 99.4 4.7E-12 1.6E-16 111.5 15.1 142 15-253 36-197 (259)
15 3h2b_A SAM-dependent methyltra 99.4 3.7E-12 1.3E-16 107.1 13.7 126 36-254 42-179 (203)
16 3dtn_A Putative methyltransfer 99.4 7.7E-12 2.6E-16 107.5 15.9 143 33-265 42-222 (234)
17 3l8d_A Methyltransferase; stru 99.4 9.6E-12 3.3E-16 107.1 16.6 129 35-254 53-197 (242)
18 4htf_A S-adenosylmethionine-de 99.4 8.2E-12 2.8E-16 110.8 16.5 133 35-253 68-228 (285)
19 2o57_A Putative sarcosine dime 99.4 1.9E-11 6.4E-16 109.0 18.4 152 16-254 63-231 (297)
20 3bkw_A MLL3908 protein, S-aden 99.4 8.6E-12 2.9E-16 107.3 15.4 103 34-226 42-144 (243)
21 3vc1_A Geranyl diphosphate 2-C 99.4 1.1E-11 3.7E-16 111.9 16.3 133 34-254 116-266 (312)
22 3sm3_A SAM-dependent methyltra 99.4 1.5E-11 5.2E-16 104.9 16.2 137 35-254 30-204 (235)
23 1vl5_A Unknown conserved prote 99.4 3.7E-11 1.3E-15 105.1 18.7 130 35-252 37-185 (260)
24 2p7i_A Hypothetical protein; p 99.4 9.3E-12 3.2E-16 106.8 14.5 128 34-254 41-196 (250)
25 3evz_A Methyltransferase; NYSG 99.4 1.7E-11 5.7E-16 105.2 15.6 129 34-255 54-203 (230)
26 3e23_A Uncharacterized protein 99.4 1.1E-11 3.9E-16 104.9 14.1 125 35-254 43-179 (211)
27 3mgg_A Methyltransferase; NYSG 99.4 2.7E-11 9.2E-16 106.7 16.9 135 33-254 35-195 (276)
28 1xtp_A LMAJ004091AAA; SGPP, st 99.4 5.3E-12 1.8E-16 109.5 11.9 132 34-254 92-235 (254)
29 3e05_A Precorrin-6Y C5,15-meth 99.3 4.9E-11 1.7E-15 100.7 17.5 125 34-254 39-164 (204)
30 3hnr_A Probable methyltransfer 99.3 6.5E-11 2.2E-15 100.5 18.3 122 35-249 45-193 (220)
31 3grz_A L11 mtase, ribosomal pr 99.3 1.8E-11 6.2E-16 103.3 14.8 138 13-253 44-181 (205)
32 1dus_A MJ0882; hypothetical pr 99.3 3.5E-11 1.2E-15 99.3 16.1 137 35-265 52-190 (194)
33 2ex4_A Adrenal gland protein A 99.3 1.5E-11 5.2E-16 106.5 14.5 133 35-254 79-222 (241)
34 1ve3_A Hypothetical protein PH 99.3 5.3E-11 1.8E-15 101.2 17.5 103 35-226 38-142 (227)
35 3gu3_A Methyltransferase; alph 99.3 4.8E-11 1.6E-15 106.3 17.5 106 34-228 21-128 (284)
36 3i9f_A Putative type 11 methyl 99.3 1.2E-11 3.9E-16 101.2 12.4 129 35-262 17-152 (170)
37 1kpg_A CFA synthase;, cyclopro 99.3 9.6E-11 3.3E-15 103.9 19.2 146 15-254 48-225 (287)
38 3pfg_A N-methyltransferase; N, 99.3 2.2E-11 7.4E-16 106.7 14.7 97 35-225 50-150 (263)
39 2fpo_A Methylase YHHF; structu 99.3 6.9E-12 2.4E-16 106.7 11.0 108 35-229 54-163 (202)
40 2yxd_A Probable cobalt-precorr 99.3 1.1E-10 3.9E-15 95.4 18.0 137 14-255 18-154 (183)
41 3g07_A 7SK snRNA methylphospha 99.3 6.4E-12 2.2E-16 112.9 11.3 83 185-268 174-286 (292)
42 3jwg_A HEN1, methyltransferase 99.3 4.6E-11 1.6E-15 101.7 16.1 127 14-226 12-141 (219)
43 4gek_A TRNA (CMO5U34)-methyltr 99.3 5.9E-11 2E-15 105.5 17.3 106 34-227 69-179 (261)
44 2fhp_A Methylase, putative; al 99.3 8.1E-12 2.8E-16 103.2 10.6 130 14-229 26-157 (187)
45 3cgg_A SAM-dependent methyltra 99.3 3E-11 1E-15 99.7 13.8 124 35-254 46-172 (195)
46 3e8s_A Putative SAM dependent 99.3 2.2E-11 7.5E-16 103.1 13.1 131 35-256 52-208 (227)
47 1y8c_A S-adenosylmethionine-de 99.3 7.8E-11 2.7E-15 101.1 16.4 101 35-225 37-141 (246)
48 3ofk_A Nodulation protein S; N 99.3 1.2E-11 4.2E-16 104.9 11.3 115 17-226 37-154 (216)
49 3hem_A Cyclopropane-fatty-acyl 99.3 1.2E-10 4.1E-15 104.3 18.2 131 34-254 71-240 (302)
50 2ift_A Putative methylase HI07 99.3 6E-12 2E-16 107.0 9.0 110 35-229 53-166 (201)
51 1l3i_A Precorrin-6Y methyltran 99.3 6E-11 2E-15 97.7 14.7 140 15-254 17-156 (192)
52 3jwh_A HEN1; methyltransferase 99.3 4.2E-11 1.4E-15 101.9 14.1 111 35-227 29-142 (217)
53 4fsd_A Arsenic methyltransfera 99.3 7.6E-11 2.6E-15 109.9 16.9 150 33-255 81-249 (383)
54 4hg2_A Methyltransferase type 99.3 2.6E-11 9E-16 107.7 12.9 107 18-225 28-134 (257)
55 2esr_A Methyltransferase; stru 99.3 7.6E-12 2.6E-16 103.1 8.7 129 12-229 11-141 (177)
56 3ou2_A SAM-dependent methyltra 99.3 9.4E-11 3.2E-15 98.9 15.7 136 35-265 46-211 (218)
57 2i62_A Nicotinamide N-methyltr 99.3 1E-11 3.5E-16 108.2 9.9 67 187-254 156-236 (265)
58 1ri5_A MRNA capping enzyme; me 99.3 3.6E-11 1.2E-15 106.4 13.3 108 34-226 63-174 (298)
59 2fk8_A Methoxy mycolic acid sy 99.3 1.3E-10 4.5E-15 104.7 16.9 116 17-226 76-194 (318)
60 2xvm_A Tellurite resistance pr 99.3 5.5E-11 1.9E-15 98.9 13.2 104 34-226 31-136 (199)
61 2nxc_A L11 mtase, ribosomal pr 99.3 5.8E-11 2E-15 104.7 13.8 138 13-254 104-241 (254)
62 3mti_A RRNA methylase; SAM-dep 99.3 1.8E-10 6E-15 95.5 15.4 52 16-73 8-59 (185)
63 3dmg_A Probable ribosomal RNA 99.3 1.4E-10 4.8E-15 108.7 16.4 127 12-229 212-343 (381)
64 3g5t_A Trans-aconitate 3-methy 99.3 1.2E-10 4E-15 104.3 15.2 110 35-224 36-147 (299)
65 2a14_A Indolethylamine N-methy 99.3 2.4E-11 8.3E-16 107.3 10.6 42 33-74 53-94 (263)
66 3njr_A Precorrin-6Y methylase; 99.3 2.4E-10 8.2E-15 97.4 16.4 119 34-249 54-172 (204)
67 2p35_A Trans-aconitate 2-methy 99.2 7.6E-11 2.6E-15 102.4 13.3 100 34-226 32-132 (259)
68 2yqz_A Hypothetical protein TT 99.2 4.8E-11 1.6E-15 103.8 11.9 103 34-225 38-140 (263)
69 3ccf_A Cyclopropane-fatty-acyl 99.2 1.6E-10 5.4E-15 102.3 15.2 98 35-226 57-154 (279)
70 1ws6_A Methyltransferase; stru 99.2 3.5E-11 1.2E-15 97.8 10.0 127 13-229 21-150 (171)
71 2ipx_A RRNA 2'-O-methyltransfe 99.2 2.1E-10 7.3E-15 99.0 15.5 132 34-253 76-213 (233)
72 3thr_A Glycine N-methyltransfe 99.2 3.6E-11 1.2E-15 106.8 10.8 111 35-226 57-175 (293)
73 1pjz_A Thiopurine S-methyltran 99.2 6.4E-11 2.2E-15 100.7 11.8 51 18-74 10-60 (203)
74 3ocj_A Putative exported prote 99.2 9.1E-11 3.1E-15 105.5 13.2 135 34-255 117-289 (305)
75 3dli_A Methyltransferase; PSI- 99.2 1.9E-10 6.6E-15 99.4 14.7 127 34-254 40-181 (240)
76 3m70_A Tellurite resistance pr 99.2 7.9E-11 2.7E-15 104.5 12.4 102 35-226 120-223 (286)
77 1yzh_A TRNA (guanine-N(7)-)-me 99.2 5.9E-10 2E-14 94.9 17.3 130 35-254 41-179 (214)
78 3q87_B N6 adenine specific DNA 99.2 4E-10 1.4E-14 93.2 15.6 51 14-72 8-58 (170)
79 2b3t_A Protein methyltransfera 99.2 6.7E-10 2.3E-14 98.5 18.1 145 14-257 93-263 (276)
80 2p8j_A S-adenosylmethionine-de 99.2 8.3E-11 2.8E-15 98.9 11.5 103 35-226 23-128 (209)
81 2fyt_A Protein arginine N-meth 99.2 8.9E-11 3E-15 108.1 12.4 104 33-223 62-168 (340)
82 3bxo_A N,N-dimethyltransferase 99.2 2E-10 6.8E-15 98.4 13.8 38 35-73 40-77 (239)
83 3m33_A Uncharacterized protein 99.2 6.9E-11 2.4E-15 101.7 10.8 116 35-254 48-164 (226)
84 3r0q_C Probable protein argini 99.2 8.2E-11 2.8E-15 109.7 11.9 109 32-228 60-171 (376)
85 1xdz_A Methyltransferase GIDB; 99.2 1.5E-10 5.2E-15 100.6 12.8 128 35-253 70-198 (240)
86 1nt2_A Fibrillarin-like PRE-rR 99.2 8.8E-10 3E-14 94.6 17.4 69 2-72 21-95 (210)
87 2frn_A Hypothetical protein PH 99.2 1.4E-10 4.8E-15 103.7 12.7 124 35-249 125-249 (278)
88 4dzr_A Protein-(glutamine-N5) 99.2 3.1E-11 1.1E-15 101.3 7.8 55 16-73 14-69 (215)
89 2kw5_A SLR1183 protein; struct 99.2 1.9E-10 6.4E-15 96.5 12.5 124 35-250 30-164 (202)
90 3q7e_A Protein arginine N-meth 99.2 1.4E-10 4.8E-15 107.0 12.6 105 33-224 64-171 (349)
91 3g2m_A PCZA361.24; SAM-depende 99.2 3.1E-10 1.1E-14 101.5 14.5 106 35-226 82-190 (299)
92 3ege_A Putative methyltransfer 99.2 8.1E-10 2.8E-14 97.0 16.9 110 17-225 20-129 (261)
93 3cc8_A Putative methyltransfer 99.2 2.6E-10 9.1E-15 96.6 13.2 128 34-254 31-182 (230)
94 2ozv_A Hypothetical protein AT 99.2 2.6E-10 9E-15 100.8 13.4 149 14-254 23-191 (260)
95 2gs9_A Hypothetical protein TT 99.2 1.5E-10 5.2E-15 97.7 11.3 98 35-227 36-133 (211)
96 3hm2_A Precorrin-6Y C5,15-meth 99.2 6.3E-10 2.2E-14 91.0 14.5 121 34-249 24-145 (178)
97 3d2l_A SAM-dependent methyltra 99.2 7.3E-10 2.5E-14 95.1 15.4 37 35-73 33-69 (243)
98 3g89_A Ribosomal RNA small sub 99.2 2.1E-10 7.3E-15 101.1 12.1 129 35-254 80-209 (249)
99 2pxx_A Uncharacterized protein 99.2 5.8E-10 2E-14 93.7 14.3 50 18-73 31-80 (215)
100 3eey_A Putative rRNA methylase 99.2 8.3E-10 2.8E-14 92.3 14.7 39 35-73 22-62 (197)
101 3u81_A Catechol O-methyltransf 99.1 4.7E-10 1.6E-14 96.2 13.2 136 35-256 58-195 (221)
102 2r3s_A Uncharacterized protein 99.1 1E-09 3.5E-14 99.2 16.2 132 35-254 165-320 (335)
103 3bkx_A SAM-dependent methyltra 99.1 1.5E-09 5.1E-14 95.3 16.7 109 34-226 42-159 (275)
104 1g6q_1 HnRNP arginine N-methyl 99.1 2.9E-10 1E-14 103.9 12.3 103 34-223 37-142 (328)
105 1zx0_A Guanidinoacetate N-meth 99.1 7.5E-11 2.6E-15 102.0 7.3 39 35-73 60-98 (236)
106 3ggd_A SAM-dependent methyltra 99.1 4.1E-10 1.4E-14 97.3 11.6 107 34-226 55-163 (245)
107 2g72_A Phenylethanolamine N-me 99.1 4.1E-10 1.4E-14 100.2 11.8 68 186-254 172-253 (289)
108 3orh_A Guanidinoacetate N-meth 99.1 8.7E-11 3E-15 102.4 7.2 105 35-225 60-169 (236)
109 2gb4_A Thiopurine S-methyltran 99.1 2.9E-10 1E-14 100.5 10.4 52 17-73 54-105 (252)
110 2b78_A Hypothetical protein SM 99.1 2.4E-10 8.2E-15 107.0 10.2 126 34-246 211-347 (385)
111 1jsx_A Glucose-inhibited divis 99.1 1.1E-09 3.7E-14 92.1 13.4 101 35-227 65-166 (207)
112 3c0k_A UPF0064 protein YCCW; P 99.1 4.7E-10 1.6E-14 105.0 12.1 124 35-245 220-354 (396)
113 1yb2_A Hypothetical protein TA 99.1 9.5E-10 3.3E-14 97.6 13.5 126 34-256 109-236 (275)
114 3mb5_A SAM-dependent methyltra 99.1 9.4E-10 3.2E-14 95.8 13.0 124 34-254 92-219 (255)
115 1fbn_A MJ fibrillarin homologu 99.1 1.4E-09 4.6E-14 93.9 13.9 132 35-254 74-210 (230)
116 2pwy_A TRNA (adenine-N(1)-)-me 99.1 2.8E-09 9.5E-14 92.5 15.7 125 34-255 95-222 (258)
117 1wzn_A SAM-dependent methyltra 99.1 9.5E-10 3.3E-14 95.3 12.6 39 34-73 40-78 (252)
118 3iv6_A Putative Zn-dependent a 99.1 6.4E-10 2.2E-14 99.2 11.5 39 34-73 44-82 (261)
119 4dcm_A Ribosomal RNA large sub 99.1 2.4E-09 8.1E-14 100.0 15.9 110 35-229 222-337 (375)
120 2fca_A TRNA (guanine-N(7)-)-me 99.1 2.8E-09 9.7E-14 91.2 15.2 129 35-253 38-175 (213)
121 3duw_A OMT, O-methyltransferas 99.1 1.7E-09 5.8E-14 92.3 13.5 136 35-255 58-205 (223)
122 2y1w_A Histone-arginine methyl 99.1 9.1E-10 3.1E-14 101.4 12.5 105 33-225 48-154 (348)
123 1o54_A SAM-dependent O-methylt 99.1 1.6E-09 5.4E-14 96.0 13.6 125 34-255 111-237 (277)
124 3gdh_A Trimethylguanosine synt 99.1 4.5E-11 1.5E-15 103.3 3.4 133 35-255 78-217 (241)
125 3kr9_A SAM-dependent methyltra 99.1 2.8E-09 9.5E-14 93.1 14.7 122 34-250 14-136 (225)
126 1ej0_A FTSJ; methyltransferase 99.1 2.8E-09 9.4E-14 86.0 13.8 141 14-254 5-158 (180)
127 2igt_A SAM dependent methyltra 99.1 1E-09 3.4E-14 100.9 12.4 46 35-86 153-198 (332)
128 2zfu_A Nucleomethylin, cerebra 99.1 1.7E-09 5.9E-14 91.6 12.9 63 186-253 113-175 (215)
129 3lec_A NADB-rossmann superfami 99.1 3.1E-09 1.1E-13 93.1 14.7 123 33-250 19-142 (230)
130 3tfw_A Putative O-methyltransf 99.1 2.1E-09 7.2E-14 94.1 13.6 134 35-255 63-208 (248)
131 3lbf_A Protein-L-isoaspartate 99.1 1.9E-09 6.5E-14 91.0 12.6 39 34-73 76-114 (210)
132 2avn_A Ubiquinone/menaquinone 99.0 1.6E-09 5.3E-14 95.0 12.2 100 35-228 54-154 (260)
133 2yvl_A TRMI protein, hypotheti 99.0 6.1E-09 2.1E-13 89.8 15.7 123 34-254 90-212 (248)
134 1qzz_A RDMB, aclacinomycin-10- 99.0 1E-08 3.5E-13 94.3 18.1 131 35-254 182-336 (374)
135 2as0_A Hypothetical protein PH 99.0 7.9E-10 2.7E-14 103.4 10.7 124 35-245 217-350 (396)
136 3a27_A TYW2, uncharacterized p 99.0 2.5E-09 8.5E-14 95.3 13.4 123 34-248 118-241 (272)
137 2ip2_A Probable phenazine-spec 99.0 1.2E-08 4E-13 92.6 18.1 131 36-255 168-320 (334)
138 1vlm_A SAM-dependent methyltra 99.0 3.7E-09 1.3E-13 90.1 13.8 69 186-255 100-186 (219)
139 3i53_A O-methyltransferase; CO 99.0 1.2E-08 4.1E-13 92.6 17.7 132 35-255 169-319 (332)
140 3gnl_A Uncharacterized protein 99.0 4.3E-09 1.5E-13 93.0 14.3 49 33-86 19-68 (244)
141 3gwz_A MMCR; methyltransferase 99.0 3.1E-08 1.1E-12 91.7 20.3 132 35-255 202-354 (369)
142 1wy7_A Hypothetical protein PH 99.0 6.8E-09 2.3E-13 87.3 14.4 60 13-73 28-87 (207)
143 3k6r_A Putative transferase PH 99.0 4.9E-09 1.7E-13 94.3 13.9 47 35-86 125-171 (278)
144 3dxy_A TRNA (guanine-N(7)-)-me 99.0 2.9E-09 9.9E-14 91.9 11.9 125 35-248 34-167 (218)
145 3bgv_A MRNA CAP guanine-N7 met 99.0 2.7E-09 9.3E-14 96.0 12.2 119 35-227 34-156 (313)
146 3bwc_A Spermidine synthase; SA 99.0 3.1E-09 1.1E-13 96.2 12.6 149 35-267 95-253 (304)
147 3b3j_A Histone-arginine methyl 99.0 9.3E-10 3.2E-14 106.0 9.4 38 34-72 157-194 (480)
148 1x19_A CRTF-related protein; m 99.0 1.7E-08 6E-13 92.6 17.6 131 35-254 190-345 (359)
149 2qm3_A Predicted methyltransfe 99.0 1.7E-08 6E-13 93.7 17.4 125 34-250 171-302 (373)
150 3v97_A Ribosomal RNA large sub 99.0 1.6E-09 5.4E-14 108.9 11.0 123 35-249 539-674 (703)
151 3ntv_A MW1564 protein; rossman 99.0 5.8E-09 2E-13 90.2 13.2 132 35-254 71-218 (232)
152 1g8a_A Fibrillarin-like PRE-rR 99.0 2.1E-08 7.1E-13 85.8 16.5 108 34-229 72-181 (227)
153 1tw3_A COMT, carminomycin 4-O- 99.0 1.8E-08 6.2E-13 92.2 17.1 131 35-254 183-336 (360)
154 3dp7_A SAM-dependent methyltra 99.0 1E-08 3.5E-13 94.7 15.3 134 35-254 179-339 (363)
155 2pjd_A Ribosomal RNA small sub 99.0 2.8E-09 9.7E-14 97.8 11.2 39 35-73 196-235 (343)
156 2vdw_A Vaccinia virus capping 99.0 6.9E-09 2.4E-13 94.0 13.6 41 186-227 127-170 (302)
157 3tr6_A O-methyltransferase; ce 99.0 7.4E-09 2.5E-13 88.2 13.1 136 35-254 64-211 (225)
158 4df3_A Fibrillarin-like rRNA/T 99.0 1E-08 3.5E-13 90.0 13.9 157 9-254 51-214 (233)
159 1i9g_A Hypothetical protein RV 98.9 1.4E-08 4.7E-13 89.5 14.5 128 34-255 98-228 (280)
160 4dmg_A Putative uncharacterize 98.9 3.8E-09 1.3E-13 99.3 11.4 46 35-86 214-259 (393)
161 4e2x_A TCAB9; kijanose, tetron 98.9 1.3E-08 4.3E-13 95.3 15.0 68 186-254 169-250 (416)
162 3id6_C Fibrillarin-like rRNA/T 98.9 2.2E-08 7.5E-13 87.8 15.4 54 18-72 60-115 (232)
163 2vdv_E TRNA (guanine-N(7)-)-me 98.9 1.3E-08 4.3E-13 88.7 13.7 47 35-82 49-96 (246)
164 1wxx_A TT1595, hypothetical pr 98.9 3.4E-09 1.2E-13 98.8 10.6 122 35-245 209-340 (382)
165 1ne2_A Hypothetical protein TA 98.9 2.1E-08 7.1E-13 84.1 14.5 40 34-73 50-89 (200)
166 3c3p_A Methyltransferase; NP_9 98.9 1.1E-08 3.6E-13 86.7 12.7 128 35-252 56-194 (210)
167 3adn_A Spermidine synthase; am 98.9 1.9E-08 6.6E-13 90.9 15.1 150 35-267 83-240 (294)
168 3mcz_A O-methyltransferase; ad 98.9 1.3E-08 4.6E-13 92.9 14.3 132 36-253 180-335 (352)
169 3htx_A HEN1; HEN1, small RNA m 98.9 1.9E-08 6.4E-13 102.1 16.5 126 18-229 708-837 (950)
170 3dr5_A Putative O-methyltransf 98.9 7.9E-09 2.7E-13 89.3 11.9 131 36-254 57-200 (221)
171 3fpf_A Mtnas, putative unchara 98.9 1.2E-08 4.2E-13 92.6 13.3 101 34-226 121-222 (298)
172 2yxe_A Protein-L-isoaspartate 98.9 1.6E-08 5.5E-13 85.5 13.3 40 34-73 76-117 (215)
173 3mq2_A 16S rRNA methyltransfer 98.9 6.1E-09 2.1E-13 88.5 10.7 38 35-72 27-65 (218)
174 3hp7_A Hemolysin, putative; st 98.9 2.1E-08 7.3E-13 90.7 14.4 55 14-72 68-122 (291)
175 1nv8_A HEMK protein; class I a 98.9 1.1E-08 3.8E-13 91.8 12.3 79 14-118 106-184 (284)
176 1vbf_A 231AA long hypothetical 98.9 1.5E-08 5.1E-13 86.7 12.5 55 13-73 53-107 (231)
177 2aot_A HMT, histamine N-methyl 98.9 2.6E-09 8.7E-14 95.4 8.0 65 186-251 133-215 (292)
178 3opn_A Putative hemolysin; str 98.9 4E-09 1.4E-13 92.1 9.0 56 13-72 19-74 (232)
179 3fzg_A 16S rRNA methylase; met 98.9 4.8E-09 1.6E-13 89.6 9.1 38 35-73 49-88 (200)
180 3tma_A Methyltransferase; thum 98.9 1.5E-08 5.1E-13 93.2 13.1 119 18-228 190-319 (354)
181 2gpy_A O-methyltransferase; st 98.9 3.5E-08 1.2E-12 84.8 14.6 105 35-225 54-159 (233)
182 2yx1_A Hypothetical protein MJ 98.9 1E-08 3.6E-13 94.0 11.6 112 35-247 195-306 (336)
183 2hnk_A SAM-dependent O-methylt 98.9 8.1E-09 2.8E-13 89.4 10.3 144 35-254 60-218 (239)
184 3tm4_A TRNA (guanine N2-)-meth 98.9 3.1E-08 1.1E-12 92.1 14.8 58 18-85 205-263 (373)
185 4azs_A Methyltransferase WBDD; 98.9 1.6E-09 5.3E-14 106.3 5.8 38 35-73 66-103 (569)
186 3reo_A (ISO)eugenol O-methyltr 98.9 1E-07 3.5E-12 88.2 17.6 138 35-269 203-367 (368)
187 1o9g_A RRNA methyltransferase; 98.9 1.1E-08 3.8E-13 89.1 10.2 46 35-81 51-99 (250)
188 3ckk_A TRNA (guanine-N(7)-)-me 98.8 4.3E-08 1.5E-12 85.5 13.9 40 35-74 46-86 (235)
189 1ixk_A Methyltransferase; open 98.8 4.4E-08 1.5E-12 89.1 14.5 46 35-85 118-165 (315)
190 3r3h_A O-methyltransferase, SA 98.8 6.4E-09 2.2E-13 91.1 8.4 136 35-254 60-207 (242)
191 1dl5_A Protein-L-isoaspartate 98.8 2.3E-08 7.8E-13 90.7 12.3 52 18-73 62-115 (317)
192 3lst_A CALO1 methyltransferase 98.8 4.4E-08 1.5E-12 89.7 14.3 68 188-256 247-335 (348)
193 3ajd_A Putative methyltransfer 98.8 4.1E-08 1.4E-12 87.3 13.4 46 35-85 83-130 (274)
194 1p91_A Ribosomal RNA large sub 98.8 1.8E-08 6E-13 88.3 10.7 39 35-73 85-124 (269)
195 2avd_A Catechol-O-methyltransf 98.8 2.6E-08 8.9E-13 85.0 11.3 136 35-254 69-216 (229)
196 2nyu_A Putative ribosomal RNA 98.8 3.7E-08 1.3E-12 81.8 11.6 50 15-68 6-65 (196)
197 2b25_A Hypothetical protein; s 98.8 8.8E-08 3E-12 87.2 15.1 40 34-73 104-145 (336)
198 1sui_A Caffeoyl-COA O-methyltr 98.8 1.4E-08 4.9E-13 89.1 9.5 109 35-225 79-189 (247)
199 1u2z_A Histone-lysine N-methyl 98.8 6.1E-08 2.1E-12 92.2 13.9 41 34-74 241-282 (433)
200 3c3y_A Pfomt, O-methyltransfer 98.8 6.1E-08 2.1E-12 84.2 12.8 137 35-254 70-223 (237)
201 1jg1_A PIMT;, protein-L-isoasp 98.8 4.8E-08 1.7E-12 84.2 11.8 54 16-73 76-129 (235)
202 3dou_A Ribosomal RNA large sub 98.8 3.7E-08 1.3E-12 83.2 10.8 49 15-68 9-57 (191)
203 1uwv_A 23S rRNA (uracil-5-)-me 98.8 1.9E-07 6.4E-12 88.5 16.9 136 16-249 271-406 (433)
204 1inl_A Spermidine synthase; be 98.8 8E-08 2.7E-12 86.6 13.6 40 35-74 90-130 (296)
205 2pbf_A Protein-L-isoaspartate 98.7 3E-08 1E-12 84.6 9.4 40 34-73 79-124 (227)
206 1fp2_A Isoflavone O-methyltran 98.7 2.7E-07 9.3E-12 84.5 16.3 68 188-256 246-340 (352)
207 2plw_A Ribosomal RNA methyltra 98.7 1.2E-07 4.2E-12 79.0 12.7 50 15-68 6-58 (201)
208 3cbg_A O-methyltransferase; cy 98.7 7.6E-08 2.6E-12 83.2 11.7 135 35-253 72-218 (232)
209 1mjf_A Spermidine synthase; sp 98.7 8.2E-08 2.8E-12 85.8 12.2 40 35-74 75-114 (281)
210 2h00_A Methyltransferase 10 do 98.7 4.8E-07 1.6E-11 78.6 16.8 39 35-73 65-104 (254)
211 1iy9_A Spermidine synthase; ro 98.7 1.3E-07 4.4E-12 84.4 13.5 40 35-74 75-115 (275)
212 2pt6_A Spermidine synthase; tr 98.7 7.4E-08 2.5E-12 88.0 12.0 39 35-73 116-155 (321)
213 2jjq_A Uncharacterized RNA met 98.7 1.5E-07 5E-12 89.3 14.4 46 35-86 290-335 (425)
214 1uir_A Polyamine aminopropyltr 98.7 1.5E-07 5.1E-12 85.5 13.6 40 35-74 77-117 (314)
215 3p9c_A Caffeic acid O-methyltr 98.7 4.6E-07 1.6E-11 83.7 17.0 135 35-266 201-362 (364)
216 2dul_A N(2),N(2)-dimethylguano 98.7 3.9E-08 1.3E-12 91.9 9.7 47 35-82 47-94 (378)
217 1i1n_A Protein-L-isoaspartate 98.7 3.7E-08 1.2E-12 84.1 8.6 41 34-74 76-118 (226)
218 2qe6_A Uncharacterized protein 98.7 1.5E-07 5.1E-12 83.9 12.7 113 36-227 78-197 (274)
219 2bm8_A Cephalosporin hydroxyla 98.7 7.6E-08 2.6E-12 83.8 10.5 122 35-248 81-208 (236)
220 3axs_A Probable N(2),N(2)-dime 98.7 3.7E-08 1.3E-12 92.6 8.7 47 35-86 52-100 (392)
221 3uwp_A Histone-lysine N-methyl 98.7 1.8E-07 6.2E-12 88.5 13.2 41 34-74 172-213 (438)
222 1af7_A Chemotaxis receptor met 98.7 4.1E-08 1.4E-12 88.0 8.2 40 186-226 211-252 (274)
223 2i7c_A Spermidine synthase; tr 98.7 1.9E-07 6.4E-12 83.6 12.4 40 35-74 78-118 (283)
224 1fp1_D Isoliquiritigenin 2'-O- 98.7 4.7E-07 1.6E-11 83.6 15.3 67 189-256 268-359 (372)
225 4a6d_A Hydroxyindole O-methylt 98.6 6.6E-07 2.3E-11 82.3 15.7 131 35-255 179-332 (353)
226 1zg3_A Isoflavanone 4'-O-methy 98.6 7.2E-07 2.5E-11 81.8 15.9 67 188-255 251-345 (358)
227 1xj5_A Spermidine synthase 1; 98.6 1.3E-07 4.5E-12 86.9 10.2 40 35-74 120-160 (334)
228 1r18_A Protein-L-isoaspartate( 98.6 8.7E-08 3E-12 82.1 8.3 41 34-74 83-130 (227)
229 3bt7_A TRNA (uracil-5-)-methyl 98.6 2.2E-07 7.5E-12 86.2 11.4 73 17-118 200-272 (369)
230 3p2e_A 16S rRNA methylase; met 98.6 5.6E-08 1.9E-12 84.2 6.6 37 35-71 24-62 (225)
231 3sso_A Methyltransferase; macr 98.6 6.1E-08 2.1E-12 91.4 7.1 37 187-225 287-323 (419)
232 3m6w_A RRNA methylase; rRNA me 98.6 3.4E-07 1.2E-11 87.8 12.0 46 35-85 101-148 (464)
233 2yxl_A PH0851 protein, 450AA l 98.6 1.4E-06 4.7E-11 82.9 15.8 45 35-84 259-305 (450)
234 1sqg_A SUN protein, FMU protei 98.6 8.7E-07 3E-11 83.7 14.2 46 35-85 246-292 (429)
235 3m4x_A NOL1/NOP2/SUN family pr 98.6 4.7E-07 1.6E-11 86.7 12.3 46 35-85 105-152 (456)
236 2o07_A Spermidine synthase; st 98.5 1.6E-07 5.4E-12 85.1 8.5 40 35-74 95-135 (304)
237 2ih2_A Modification methylase 98.5 1.2E-06 4E-11 81.6 14.3 51 17-71 25-77 (421)
238 2frx_A Hypothetical protein YE 98.5 1.7E-06 5.8E-11 83.2 15.2 46 35-85 117-164 (479)
239 1zq9_A Probable dimethyladenos 98.5 4.4E-07 1.5E-11 81.3 9.7 50 19-73 16-65 (285)
240 2b2c_A Spermidine synthase; be 98.5 1.9E-07 6.6E-12 85.1 7.2 40 35-74 108-148 (314)
241 3frh_A 16S rRNA methylase; met 98.5 1E-06 3.4E-11 77.8 11.3 37 35-73 105-141 (253)
242 2ld4_A Anamorsin; methyltransf 98.5 3.2E-07 1.1E-11 75.2 7.6 64 185-249 60-128 (176)
243 2xyq_A Putative 2'-O-methyl tr 98.5 8.9E-07 3.1E-11 80.0 11.1 62 187-255 122-195 (290)
244 2f8l_A Hypothetical protein LM 98.5 1.1E-06 3.8E-11 80.3 11.8 40 35-74 130-175 (344)
245 3gjy_A Spermidine synthase; AP 98.4 3.7E-07 1.3E-11 83.5 7.7 38 37-74 91-129 (317)
246 3lcv_B Sisomicin-gentamicin re 98.4 1E-06 3.5E-11 78.7 10.2 38 36-73 133-171 (281)
247 3ldu_A Putative methylase; str 98.4 1.1E-06 3.9E-11 82.1 11.1 53 18-74 182-273 (385)
248 2h1r_A Dimethyladenosine trans 98.4 1.2E-06 4E-11 79.1 10.6 39 34-73 41-79 (299)
249 2p41_A Type II methyltransfera 98.4 3.3E-06 1.1E-10 76.5 12.9 46 14-66 66-111 (305)
250 3k0b_A Predicted N6-adenine-sp 98.4 2.5E-06 8.7E-11 80.0 12.1 59 18-85 188-285 (393)
251 2cmg_A Spermidine synthase; tr 98.3 8.6E-07 2.9E-11 78.7 7.8 39 35-74 72-110 (262)
252 3ldg_A Putative uncharacterize 98.3 6E-06 2E-10 77.3 13.8 59 18-85 181-278 (384)
253 3gru_A Dimethyladenosine trans 98.3 3.8E-06 1.3E-10 75.9 11.4 39 34-73 49-87 (295)
254 2oxt_A Nucleoside-2'-O-methylt 98.3 1.5E-06 5.2E-11 77.2 8.2 48 14-68 58-105 (265)
255 2wa2_A Non-structural protein 98.2 1.8E-06 6.1E-11 77.2 7.6 48 14-68 66-113 (276)
256 1qam_A ERMC' methyltransferase 98.2 7.7E-06 2.6E-10 71.4 11.5 50 18-72 17-66 (244)
257 2r6z_A UPF0341 protein in RSP 98.2 9E-07 3.1E-11 78.4 5.4 33 35-68 83-115 (258)
258 4gqb_A Protein arginine N-meth 98.2 2.4E-06 8.1E-11 84.8 8.8 49 32-82 354-407 (637)
259 2qfm_A Spermine synthase; sper 98.2 2.3E-06 7.7E-11 79.6 7.0 40 35-74 188-227 (364)
260 3ll7_A Putative methyltransfer 98.2 3.5E-06 1.2E-10 79.5 7.7 37 36-73 94-130 (410)
261 2okc_A Type I restriction enzy 98.1 1.6E-05 5.3E-10 75.4 12.0 53 18-74 158-224 (445)
262 2b9e_A NOL1/NOP2/SUN domain fa 98.1 8.7E-05 3E-09 67.3 14.8 46 35-85 102-149 (309)
263 3ftd_A Dimethyladenosine trans 98.0 2.5E-05 8.7E-10 68.6 10.1 51 19-73 19-69 (249)
264 3fut_A Dimethyladenosine trans 98.0 3.7E-05 1.3E-09 68.6 11.2 36 35-72 47-82 (271)
265 3giw_A Protein of unknown func 98.0 0.00011 3.6E-09 65.9 13.1 37 191-228 163-202 (277)
266 3tqs_A Ribosomal RNA small sub 97.9 2.4E-05 8.2E-10 69.1 8.4 38 35-73 29-66 (255)
267 2oo3_A Protein involved in cat 97.9 2.9E-06 9.9E-11 76.2 1.9 153 3-249 59-218 (283)
268 1yub_A Ermam, rRNA methyltrans 97.9 5.5E-07 1.9E-11 78.5 -3.3 37 35-72 29-65 (245)
269 2k4m_A TR8_protein, UPF0146 pr 97.8 1.9E-05 6.4E-10 64.5 5.5 59 3-71 12-72 (153)
270 3ua3_A Protein arginine N-meth 97.8 2.3E-05 7.8E-10 78.4 7.0 37 35-71 409-459 (745)
271 1m6y_A S-adenosyl-methyltransf 97.8 6E-05 2.1E-09 68.2 8.9 62 35-120 26-88 (301)
272 3v97_A Ribosomal RNA large sub 97.8 0.00012 4.1E-09 73.4 11.4 35 18-56 177-211 (703)
273 2oyr_A UPF0341 protein YHIQ; a 97.8 2.3E-05 8E-10 69.5 5.2 36 37-73 90-125 (258)
274 3uzu_A Ribosomal RNA small sub 97.7 9.6E-05 3.3E-09 66.1 8.2 39 35-73 42-83 (279)
275 2ar0_A M.ecoki, type I restric 97.7 0.00022 7.4E-09 69.5 10.7 52 19-74 157-227 (541)
276 3evf_A RNA-directed RNA polyme 97.6 0.00025 8.6E-09 63.3 10.2 60 4-68 48-108 (277)
277 1qyr_A KSGA, high level kasuga 97.6 9.1E-05 3.1E-09 65.2 6.5 47 19-72 9-57 (252)
278 3lkd_A Type I restriction-modi 97.6 0.0018 6.1E-08 63.1 16.1 41 34-74 220-264 (542)
279 3s1s_A Restriction endonucleas 97.6 0.00045 1.5E-08 70.1 12.0 39 35-73 321-363 (878)
280 3cvo_A Methyltransferase-like 97.5 0.0012 4.1E-08 56.4 12.2 37 35-73 30-66 (202)
281 3khk_A Type I restriction-modi 97.4 0.0012 4.2E-08 64.3 12.9 45 206-251 376-421 (544)
282 3o4f_A Spermidine synthase; am 97.4 0.0044 1.5E-07 55.8 14.5 40 35-74 83-123 (294)
283 4auk_A Ribosomal RNA large sub 97.3 0.0045 1.5E-07 57.6 13.7 35 33-68 209-243 (375)
284 2zig_A TTHA0409, putative modi 97.2 0.00093 3.2E-08 59.7 7.8 50 18-73 223-272 (297)
285 2qy6_A UPF0209 protein YFCK; s 96.8 0.0042 1.4E-07 54.7 8.7 66 187-265 172-243 (257)
286 1g60_A Adenine-specific methyl 96.6 0.0044 1.5E-07 54.2 7.1 50 18-73 200-249 (260)
287 4fzv_A Putative methyltransfer 96.6 0.024 8.1E-07 52.4 12.2 59 14-85 135-194 (359)
288 3r24_A NSP16, 2'-O-methyl tran 96.0 0.068 2.3E-06 48.3 11.5 48 18-68 95-148 (344)
289 1g55_A DNA cytosine methyltran 95.9 0.029 9.8E-07 51.2 9.0 42 37-83 3-46 (343)
290 3c6k_A Spermine synthase; sper 95.8 0.011 3.8E-07 55.0 5.8 40 35-74 205-244 (381)
291 3g7u_A Cytosine-specific methy 95.4 0.033 1.1E-06 51.6 7.6 42 37-83 3-44 (376)
292 2px2_A Genome polyprotein [con 95.3 0.032 1.1E-06 49.3 6.5 49 3-56 46-94 (269)
293 3b5i_A S-adenosyl-L-methionine 95.3 0.069 2.4E-06 49.5 9.1 41 185-226 147-225 (374)
294 2wk1_A NOVP; transferase, O-me 95.0 0.058 2E-06 48.1 7.6 33 35-67 106-144 (282)
295 1wg8_A Predicted S-adenosylmet 94.7 0.11 3.6E-06 46.5 8.4 37 35-72 22-58 (285)
296 2efj_A 3,7-dimethylxanthine me 94.7 0.23 7.8E-06 46.2 11.0 19 36-54 53-71 (384)
297 2c7p_A Modification methylase 94.5 0.065 2.2E-06 48.6 6.7 46 33-83 8-53 (327)
298 3ufb_A Type I restriction-modi 93.9 1.7 5.9E-05 41.8 15.6 53 18-74 204-270 (530)
299 3qv2_A 5-cytosine DNA methyltr 93.6 1.1 3.8E-05 40.5 13.0 44 35-83 9-55 (327)
300 3lkz_A Non-structural protein 93.5 0.046 1.6E-06 49.3 3.6 61 3-68 67-128 (321)
301 3gcz_A Polyprotein; flavivirus 93.3 0.093 3.2E-06 46.8 5.2 52 12-68 72-124 (282)
302 2vz8_A Fatty acid synthase; tr 92.5 0.059 2E-06 61.1 3.3 39 187-226 1310-1348(2512)
303 1g60_A Adenine-specific methyl 90.8 0.5 1.7E-05 40.9 6.8 67 185-259 20-102 (260)
304 3p8z_A Mtase, non-structural p 90.8 0.25 8.4E-06 43.3 4.7 50 14-68 62-112 (267)
305 1i4w_A Mitochondrial replicati 90.2 0.52 1.8E-05 43.2 6.6 37 35-71 58-95 (353)
306 3eld_A Methyltransferase; flav 90.1 0.51 1.7E-05 42.4 6.3 59 5-68 56-115 (300)
307 1boo_A Protein (N-4 cytosine-s 89.0 1 3.6E-05 40.3 7.6 72 185-258 30-122 (323)
308 2py6_A Methyltransferase FKBM; 88.9 0.85 2.9E-05 42.4 7.1 47 34-85 225-274 (409)
309 1boo_A Protein (N-4 cytosine-s 88.5 0.82 2.8E-05 41.0 6.5 49 18-72 240-288 (323)
310 1m6e_X S-adenosyl-L-methionnin 88.3 0.22 7.5E-06 45.9 2.6 40 185-225 136-208 (359)
311 4dcm_A Ribosomal RNA large sub 88.0 12 0.00042 34.0 14.3 66 7-82 16-81 (375)
312 3ubt_Y Modification methylase 86.6 0.76 2.6E-05 40.8 5.1 42 37-83 1-42 (331)
313 1eg2_A Modification methylase 86.6 1.7 5.8E-05 39.0 7.4 73 185-259 55-143 (319)
314 1eg2_A Modification methylase 86.5 1.3 4.5E-05 39.8 6.6 50 17-72 229-281 (319)
315 2qrv_A DNA (cytosine-5)-methyl 84.4 1.7 5.7E-05 38.7 6.2 39 33-71 13-53 (295)
316 4h0n_A DNMT2; SAH binding, tra 83.6 1.6 5.6E-05 39.4 5.9 42 37-83 4-47 (333)
317 2zig_A TTHA0409, putative modi 80.8 5.1 0.00018 35.1 8.0 72 185-258 37-138 (297)
318 2dph_A Formaldehyde dismutase; 77.4 2.6 9E-05 38.4 5.1 38 34-71 184-223 (398)
319 3me5_A Cytosine-specific methy 75.4 3.4 0.00012 39.3 5.4 37 35-71 87-123 (482)
320 4dvj_A Putative zinc-dependent 73.3 8.1 0.00028 34.7 7.2 37 35-71 171-210 (363)
321 1f8f_A Benzyl alcohol dehydrog 73.1 4 0.00014 36.6 5.1 40 33-72 188-229 (371)
322 1kol_A Formaldehyde dehydrogen 70.6 5.7 0.0002 36.0 5.5 39 34-72 184-224 (398)
323 1pl8_A Human sorbitol dehydrog 70.2 6 0.00021 35.3 5.5 39 34-72 170-210 (356)
324 4fn4_A Short chain dehydrogena 62.4 31 0.0011 29.5 8.4 39 33-72 4-45 (254)
325 4ft4_B DNA (cytosine-5)-methyl 62.2 7.1 0.00024 39.0 4.7 43 35-82 211-259 (784)
326 3fpc_A NADP-dependent alcohol 60.9 9.1 0.00031 34.0 4.8 39 34-72 165-205 (352)
327 4dkj_A Cytosine-specific methy 59.9 9.2 0.00032 35.4 4.7 44 35-83 9-58 (403)
328 4fgs_A Probable dehydrogenase 59.2 18 0.00061 31.5 6.3 39 33-72 26-67 (273)
329 3swr_A DNA (cytosine-5)-methyl 58.8 12 0.00041 38.9 5.8 38 34-71 538-576 (1002)
330 2a9f_A Putative malic enzyme ( 58.3 17 0.00059 33.7 6.2 52 15-67 168-221 (398)
331 4g81_D Putative hexonate dehyd 57.9 13 0.00045 32.0 5.1 40 32-72 5-47 (255)
332 3tka_A Ribosomal RNA small sub 56.3 16 0.00054 33.3 5.5 39 35-73 57-97 (347)
333 1cdo_A Alcohol dehydrogenase; 56.2 11 0.00038 33.7 4.5 39 33-71 190-230 (374)
334 3iup_A Putative NADPH:quinone 55.9 12 0.00042 33.7 4.8 36 35-71 170-209 (379)
335 1p0f_A NADP-dependent alcohol 55.5 11 0.00037 33.8 4.3 39 33-71 189-229 (373)
336 3m6i_A L-arabinitol 4-dehydrog 54.5 18 0.00061 32.1 5.6 39 34-72 178-218 (363)
337 1zkd_A DUF185; NESG, RPR58, st 54.0 31 0.0011 31.8 7.2 36 36-71 81-124 (387)
338 2d8a_A PH0655, probable L-thre 53.8 17 0.00058 32.1 5.3 36 35-72 167-206 (348)
339 3s2e_A Zinc-containing alcohol 53.5 20 0.00067 31.5 5.7 39 33-72 164-204 (340)
340 3o38_A Short chain dehydrogena 53.0 59 0.002 27.0 8.5 38 33-71 19-60 (266)
341 4b79_A PA4098, probable short- 51.9 17 0.00057 31.2 4.7 38 32-70 7-47 (242)
342 2dpm_A M.dpnii 1, protein (ade 51.9 18 0.00061 31.7 5.1 48 18-73 23-70 (284)
343 4ej6_A Putative zinc-binding d 50.8 27 0.00094 31.2 6.3 39 34-72 181-221 (370)
344 1vl6_A Malate oxidoreductase; 50.2 26 0.00091 32.3 6.1 52 15-67 172-225 (388)
345 3qiv_A Short-chain dehydrogena 49.7 88 0.003 25.6 9.0 39 32-71 5-46 (253)
346 3h8v_A Ubiquitin-like modifier 49.2 8.6 0.00029 34.1 2.5 48 31-83 31-80 (292)
347 3ip1_A Alcohol dehydrogenase, 49.2 29 0.001 31.3 6.3 38 33-72 211-252 (404)
348 1e3i_A Alcohol dehydrogenase, 49.1 22 0.00076 31.7 5.4 39 33-71 193-233 (376)
349 3av4_A DNA (cytosine-5)-methyl 49.0 23 0.00077 38.0 6.0 37 35-71 850-887 (1330)
350 3ucx_A Short chain dehydrogena 48.9 1E+02 0.0034 25.7 9.3 38 33-71 8-48 (264)
351 1jvb_A NAD(H)-dependent alcoho 48.4 20 0.00068 31.6 4.9 38 34-72 169-210 (347)
352 3uko_A Alcohol dehydrogenase c 48.2 17 0.00059 32.5 4.5 39 33-71 191-231 (378)
353 2g1p_A DNA adenine methylase; 48.1 15 0.00052 32.0 3.9 47 18-73 16-62 (278)
354 1pqw_A Polyketide synthase; ro 47.5 12 0.00042 29.9 3.1 38 33-71 36-76 (198)
355 2h6e_A ADH-4, D-arabinose 1-de 46.3 32 0.0011 30.2 5.8 37 35-72 170-210 (344)
356 2dq4_A L-threonine 3-dehydroge 46.0 22 0.00076 31.2 4.8 37 35-71 164-202 (343)
357 2fzw_A Alcohol dehydrogenase c 45.1 26 0.00089 31.1 5.1 39 33-71 188-228 (373)
358 4eez_A Alcohol dehydrogenase 1 45.0 30 0.001 30.2 5.5 38 34-71 162-201 (348)
359 1v3u_A Leukotriene B4 12- hydr 44.7 22 0.00074 31.1 4.5 38 33-71 143-183 (333)
360 2jhf_A Alcohol dehydrogenase E 44.7 27 0.00092 31.1 5.2 39 33-71 189-229 (374)
361 4f3n_A Uncharacterized ACR, CO 44.3 27 0.00092 32.7 5.2 50 18-71 124-179 (432)
362 3jv7_A ADH-A; dehydrogenase, n 43.9 23 0.0008 31.1 4.6 39 34-72 170-210 (345)
363 3gaf_A 7-alpha-hydroxysteroid 43.8 1E+02 0.0034 25.6 8.5 39 32-71 8-49 (256)
364 1e3j_A NADP(H)-dependent ketos 42.7 29 0.001 30.6 5.1 38 34-72 167-206 (352)
365 1vj0_A Alcohol dehydrogenase, 42.5 36 0.0012 30.5 5.7 39 34-72 194-234 (380)
366 2cdc_A Glucose dehydrogenase g 42.5 29 0.00099 30.8 5.0 30 36-68 181-214 (366)
367 1piw_A Hypothetical zinc-type 42.4 25 0.00085 31.2 4.5 37 34-71 178-216 (360)
368 4a2c_A Galactitol-1-phosphate 41.5 37 0.0013 29.6 5.5 39 33-71 158-198 (346)
369 1uuf_A YAHK, zinc-type alcohol 40.9 25 0.00085 31.5 4.3 38 34-72 193-232 (369)
370 3h7a_A Short chain dehydrogena 40.4 83 0.0028 26.1 7.4 38 33-71 4-44 (252)
371 1pjc_A Protein (L-alanine dehy 39.9 48 0.0017 29.6 6.1 37 34-73 165-205 (361)
372 3ic5_A Putative saccharopine d 39.6 51 0.0017 23.2 5.2 35 35-71 4-42 (118)
373 2eih_A Alcohol dehydrogenase; 39.5 34 0.0012 30.0 5.0 38 34-72 165-205 (343)
374 2vhw_A Alanine dehydrogenase; 39.4 49 0.0017 29.8 6.1 37 33-72 165-205 (377)
375 2hcy_A Alcohol dehydrogenase 1 39.3 23 0.0008 31.1 3.8 38 33-71 167-207 (347)
376 2eez_A Alanine dehydrogenase; 39.1 50 0.0017 29.6 6.1 37 33-72 163-203 (369)
377 1h2b_A Alcohol dehydrogenase; 39.0 46 0.0016 29.4 5.8 35 34-71 185-224 (359)
378 3tjr_A Short chain dehydrogena 38.6 1.4E+02 0.0048 25.4 8.8 38 33-71 28-68 (301)
379 4egf_A L-xylulose reductase; s 38.6 1.1E+02 0.0038 25.4 8.0 38 33-71 17-57 (266)
380 3rkr_A Short chain oxidoreduct 38.5 1.3E+02 0.0043 25.0 8.3 38 33-71 26-66 (262)
381 3uog_A Alcohol dehydrogenase; 38.4 39 0.0013 29.9 5.2 38 33-71 187-226 (363)
382 1rjw_A ADH-HT, alcohol dehydro 38.3 43 0.0015 29.3 5.4 38 34-72 163-202 (339)
383 3tnl_A Shikimate dehydrogenase 37.9 79 0.0027 28.0 7.1 35 32-67 150-187 (315)
384 4b7c_A Probable oxidoreductase 37.7 27 0.00092 30.5 3.9 38 33-71 147-187 (336)
385 3two_A Mannitol dehydrogenase; 37.6 25 0.00085 31.0 3.7 38 33-71 174-213 (348)
386 2j3h_A NADP-dependent oxidored 37.1 28 0.00095 30.5 3.9 37 34-71 154-193 (345)
387 3jyo_A Quinate/shikimate dehyd 37.0 62 0.0021 28.1 6.2 38 33-71 124-164 (283)
388 4fs3_A Enoyl-[acyl-carrier-pro 36.9 42 0.0015 28.2 5.0 38 33-71 3-45 (256)
389 3svt_A Short-chain type dehydr 36.6 1.5E+02 0.005 24.9 8.4 39 32-71 7-48 (281)
390 4ibo_A Gluconate dehydrogenase 36.2 95 0.0033 26.1 7.2 38 33-71 23-63 (271)
391 1o5i_A 3-oxoacyl-(acyl carrier 35.7 65 0.0022 26.7 5.9 41 30-71 13-56 (249)
392 3lf2_A Short chain oxidoreduct 35.3 81 0.0028 26.3 6.5 39 32-71 4-45 (265)
393 4eso_A Putative oxidoreductase 35.2 75 0.0026 26.4 6.3 38 33-71 5-45 (255)
394 3goh_A Alcohol dehydrogenase, 35.1 31 0.001 29.9 3.8 37 33-71 140-178 (315)
395 3llv_A Exopolyphosphatase-rela 34.6 61 0.0021 24.0 5.1 34 35-71 5-42 (141)
396 3ond_A Adenosylhomocysteinase; 34.3 94 0.0032 29.5 7.3 37 32-71 261-301 (488)
397 3pk0_A Short-chain dehydrogena 34.3 1.3E+02 0.0045 24.9 7.7 39 32-71 6-47 (262)
398 3rwb_A TPLDH, pyridoxal 4-dehy 34.1 77 0.0026 26.1 6.1 38 33-71 3-43 (247)
399 2b5w_A Glucose dehydrogenase; 34.1 43 0.0015 29.6 4.7 33 37-69 174-210 (357)
400 1leh_A Leucine dehydrogenase; 34.0 66 0.0023 29.2 6.0 36 33-71 170-209 (364)
401 3f9i_A 3-oxoacyl-[acyl-carrier 33.7 69 0.0024 26.2 5.7 40 31-71 9-51 (249)
402 4fc7_A Peroxisomal 2,4-dienoyl 33.7 1.7E+02 0.0059 24.4 8.5 38 33-71 24-64 (277)
403 3f1l_A Uncharacterized oxidore 33.4 98 0.0033 25.5 6.7 39 32-71 8-49 (252)
404 3tfo_A Putative 3-oxoacyl-(acy 33.4 1.6E+02 0.0054 24.7 8.1 37 34-71 2-41 (264)
405 3lyl_A 3-oxoacyl-(acyl-carrier 33.2 1.7E+02 0.0059 23.6 8.2 37 34-71 3-42 (247)
406 3r1i_A Short-chain type dehydr 33.1 1.1E+02 0.0038 25.8 7.1 38 33-71 29-69 (276)
407 3vyw_A MNMC2; tRNA wobble urid 32.8 26 0.00088 31.3 2.9 56 187-254 185-245 (308)
408 3pwz_A Shikimate dehydrogenase 32.7 82 0.0028 27.1 6.2 39 32-71 116-157 (272)
409 1jw9_B Molybdopterin biosynthe 32.5 23 0.00078 30.1 2.5 36 33-68 28-65 (249)
410 1fmc_A 7 alpha-hydroxysteroid 32.1 2E+02 0.0068 23.2 8.5 38 32-71 7-48 (255)
411 3sx2_A Putative 3-ketoacyl-(ac 31.9 2.2E+02 0.0074 23.6 8.9 35 32-67 9-46 (278)
412 2ae2_A Protein (tropinone redu 31.8 2.1E+02 0.0073 23.4 9.3 39 32-71 5-46 (260)
413 3t7c_A Carveol dehydrogenase; 31.2 2.2E+02 0.0075 24.1 8.8 34 33-67 25-61 (299)
414 3pxx_A Carveol dehydrogenase; 31.1 2.3E+02 0.0077 23.5 8.8 34 33-67 7-43 (287)
415 3l77_A Short-chain alcohol deh 31.0 2E+02 0.0068 23.0 8.2 35 35-71 1-39 (235)
416 2zb4_A Prostaglandin reductase 31.0 48 0.0016 29.2 4.5 38 34-71 157-199 (357)
417 4hp8_A 2-deoxy-D-gluconate 3-d 31.0 50 0.0017 28.2 4.4 37 31-68 4-43 (247)
418 1wly_A CAAR, 2-haloacrylate re 30.9 52 0.0018 28.6 4.7 39 33-72 143-184 (333)
419 2rhc_B Actinorhodin polyketide 30.9 2.2E+02 0.0075 23.7 8.6 38 33-71 19-59 (277)
420 2g1u_A Hypothetical protein TM 30.8 70 0.0024 24.3 5.0 36 33-71 16-55 (155)
421 4dqx_A Probable oxidoreductase 30.6 1E+02 0.0035 26.0 6.4 39 32-71 23-64 (277)
422 1yb5_A Quinone oxidoreductase; 30.5 50 0.0017 29.2 4.5 37 34-71 169-208 (351)
423 3o26_A Salutaridine reductase; 30.5 1.5E+02 0.0052 24.7 7.5 38 33-71 9-49 (311)
424 3ftp_A 3-oxoacyl-[acyl-carrier 30.4 1.7E+02 0.0058 24.4 7.8 38 33-71 25-65 (270)
425 1iz0_A Quinone oxidoreductase; 30.3 28 0.00095 29.9 2.7 38 33-71 123-163 (302)
426 2qq5_A DHRS1, dehydrogenase/re 30.2 2.1E+02 0.0072 23.4 8.3 36 34-71 3-42 (260)
427 1zem_A Xylitol dehydrogenase; 30.2 2.2E+02 0.0075 23.4 8.4 38 33-71 4-44 (262)
428 3i1j_A Oxidoreductase, short c 29.9 98 0.0034 25.1 6.1 39 32-71 10-51 (247)
429 1x13_A NAD(P) transhydrogenase 29.9 56 0.0019 29.9 4.8 36 34-72 170-209 (401)
430 4imr_A 3-oxoacyl-(acyl-carrier 29.7 1.2E+02 0.004 25.6 6.7 38 33-71 30-70 (275)
431 3fwz_A Inner membrane protein 29.6 55 0.0019 24.6 4.1 32 37-71 8-43 (140)
432 2jah_A Clavulanic acid dehydro 29.2 2.3E+02 0.0079 23.0 8.8 38 33-71 4-44 (247)
433 3cxt_A Dehydrogenase with diff 29.2 2.2E+02 0.0075 24.1 8.4 38 33-71 31-71 (291)
434 4h15_A Short chain alcohol deh 29.2 54 0.0019 28.0 4.4 36 32-68 7-45 (261)
435 4dio_A NAD(P) transhydrogenase 29.1 61 0.0021 30.0 4.9 38 34-72 188-227 (405)
436 3gms_A Putative NADPH:quinone 29.1 27 0.00093 30.6 2.5 38 33-71 142-182 (340)
437 3gvc_A Oxidoreductase, probabl 29.1 94 0.0032 26.3 5.9 38 33-71 26-66 (277)
438 2l48_A N-acetylmuramoyl-L-alan 29.0 76 0.0026 22.9 4.3 58 187-250 17-81 (85)
439 3ged_A Short-chain dehydrogena 29.0 84 0.0029 26.6 5.5 35 36-71 2-39 (247)
440 1yqd_A Sinapyl alcohol dehydro 28.7 68 0.0023 28.4 5.1 34 35-71 187-224 (366)
441 3k31_A Enoyl-(acyl-carrier-pro 28.7 2E+02 0.007 24.3 8.1 37 33-70 27-68 (296)
442 3sju_A Keto reductase; short-c 28.6 1.9E+02 0.0065 24.2 7.8 39 32-71 20-61 (279)
443 2h7i_A Enoyl-[acyl-carrier-pro 28.5 60 0.0021 27.1 4.5 35 34-69 5-44 (269)
444 3zv4_A CIS-2,3-dihydrobiphenyl 28.5 1.1E+02 0.0038 25.8 6.3 37 34-71 3-42 (281)
445 4e6p_A Probable sorbitol dehyd 28.5 1.1E+02 0.0039 25.2 6.3 38 33-71 5-45 (259)
446 3ado_A Lambda-crystallin; L-gu 28.3 1.1E+02 0.0037 27.2 6.3 47 36-84 6-54 (319)
447 4gkb_A 3-oxoacyl-[acyl-carrier 28.1 54 0.0018 28.0 4.1 38 32-70 3-43 (258)
448 3awd_A GOX2181, putative polyo 28.0 2.4E+02 0.0082 22.8 8.6 37 33-71 10-50 (260)
449 4g65_A TRK system potassium up 28.0 1.1E+02 0.0036 28.5 6.4 34 36-71 3-39 (461)
450 3n74_A 3-ketoacyl-(acyl-carrie 27.9 1.2E+02 0.0042 24.8 6.4 39 32-71 5-46 (261)
451 1yb1_A 17-beta-hydroxysteroid 27.9 2.6E+02 0.0088 23.1 9.1 38 32-71 27-68 (272)
452 3pgx_A Carveol dehydrogenase; 27.9 2.5E+02 0.0086 23.3 8.5 33 33-66 12-47 (280)
453 3vtz_A Glucose 1-dehydrogenase 27.8 54 0.0018 27.6 4.1 38 31-69 9-49 (269)
454 3v2h_A D-beta-hydroxybutyrate 27.8 2.4E+02 0.0083 23.6 8.4 38 33-71 22-63 (281)
455 4dry_A 3-oxoacyl-[acyl-carrier 27.4 76 0.0026 26.9 5.0 39 32-71 29-70 (281)
456 3op4_A 3-oxoacyl-[acyl-carrier 27.3 99 0.0034 25.5 5.7 38 33-71 6-46 (248)
457 3ppi_A 3-hydroxyacyl-COA dehyd 27.2 88 0.003 26.2 5.4 38 33-71 27-67 (281)
458 3imf_A Short chain dehydrogena 27.0 1E+02 0.0034 25.6 5.6 38 33-71 3-43 (257)
459 3ioy_A Short-chain dehydrogena 26.8 1.4E+02 0.0049 25.7 6.8 38 33-71 5-45 (319)
460 1vl8_A Gluconate 5-dehydrogena 26.8 1.3E+02 0.0044 25.1 6.4 40 31-71 16-58 (267)
461 3uve_A Carveol dehydrogenase ( 26.7 2.7E+02 0.0092 23.1 8.5 34 33-67 8-44 (286)
462 3vrd_B FCCB subunit, flavocyto 26.6 47 0.0016 29.5 3.6 34 35-68 1-37 (401)
463 3rku_A Oxidoreductase YMR226C; 26.5 2.9E+02 0.0099 23.3 8.9 38 34-71 31-73 (287)
464 3tsc_A Putative oxidoreductase 26.4 2.8E+02 0.0094 23.0 8.7 33 33-66 8-43 (277)
465 3tox_A Short chain dehydrogena 26.4 85 0.0029 26.6 5.1 38 33-71 5-45 (280)
466 3o8q_A Shikimate 5-dehydrogena 26.4 1.2E+02 0.004 26.3 6.1 39 32-71 122-163 (281)
467 1ae1_A Tropinone reductase-I; 26.3 2.8E+02 0.0094 23.0 9.0 39 32-71 17-58 (273)
468 4da9_A Short-chain dehydrogena 26.3 2.8E+02 0.0097 23.1 9.3 38 33-71 26-67 (280)
469 1lss_A TRK system potassium up 26.2 1.7E+02 0.006 20.9 6.4 33 36-71 4-40 (140)
470 3nyw_A Putative oxidoreductase 25.9 1.2E+02 0.0041 25.0 6.0 38 33-71 4-44 (250)
471 2hmt_A YUAA protein; RCK, KTN, 25.9 79 0.0027 23.0 4.3 35 34-71 4-42 (144)
472 3t4x_A Oxidoreductase, short c 25.8 1E+02 0.0035 25.7 5.5 38 33-71 7-47 (267)
473 1rjd_A PPM1P, carboxy methyl t 25.7 3.4E+02 0.012 23.8 13.2 37 36-73 98-135 (334)
474 1yf3_A DNA adenine methylase; 25.2 32 0.0011 29.5 2.1 45 19-73 14-58 (259)
475 3p2y_A Alanine dehydrogenase/p 24.9 72 0.0025 29.2 4.5 36 34-72 182-221 (381)
476 3qwb_A Probable quinone oxidor 24.9 64 0.0022 28.0 4.1 38 33-71 146-186 (334)
477 3nv9_A Malic enzyme; rossmann 24.6 72 0.0025 30.3 4.5 52 15-67 199-254 (487)
478 2j8z_A Quinone oxidoreductase; 24.5 62 0.0021 28.5 4.0 39 33-72 160-201 (354)
479 1yxm_A Pecra, peroxisomal tran 24.5 1.4E+02 0.0049 25.0 6.3 38 32-71 14-55 (303)
480 3tum_A Shikimate dehydrogenase 24.2 1.2E+02 0.0039 26.2 5.6 40 32-71 121-162 (269)
481 3eld_A Methyltransferase; flav 24.1 1.7E+02 0.0058 25.9 6.6 67 185-257 144-218 (300)
482 1iy8_A Levodione reductase; ox 24.1 1.5E+02 0.0051 24.5 6.2 39 32-71 9-50 (267)
483 4dmm_A 3-oxoacyl-[acyl-carrier 23.9 2.9E+02 0.0098 22.9 8.1 39 32-71 24-66 (269)
484 4eye_A Probable oxidoreductase 23.9 50 0.0017 29.0 3.2 38 33-71 157-197 (342)
485 1w6u_A 2,4-dienoyl-COA reducta 23.8 3.1E+02 0.011 22.7 8.7 38 32-71 22-63 (302)
486 2cf5_A Atccad5, CAD, cinnamyl 23.7 57 0.0019 28.8 3.6 34 35-71 180-217 (357)
487 2c0c_A Zinc binding alcohol de 23.7 88 0.003 27.6 4.9 37 34-71 162-201 (362)
488 2zat_A Dehydrogenase/reductase 23.5 3E+02 0.01 22.4 8.2 37 33-71 11-51 (260)
489 2gn4_A FLAA1 protein, UDP-GLCN 23.3 3.2E+02 0.011 23.5 8.5 38 33-71 18-60 (344)
490 5nul_A Flavodoxin; electron tr 23.3 2.2E+02 0.0075 20.8 6.8 59 188-249 45-108 (138)
491 1c1d_A L-phenylalanine dehydro 23.3 2.2E+02 0.0076 25.6 7.5 34 33-69 172-209 (355)
492 3c85_A Putative glutathione-re 23.3 1.4E+02 0.0047 23.2 5.5 36 33-71 36-76 (183)
493 3v8b_A Putative dehydrogenase, 23.0 1.5E+02 0.005 25.1 6.0 38 33-71 25-65 (283)
494 3rht_A (gatase1)-like protein; 22.9 76 0.0026 27.4 4.1 41 187-228 49-89 (259)
495 1xu9_A Corticosteroid 11-beta- 22.9 3.2E+02 0.011 22.7 8.2 37 33-71 25-65 (286)
496 3l4b_C TRKA K+ channel protien 22.7 1.7E+02 0.0057 23.5 6.1 31 38-71 2-36 (218)
497 3fpn_A Geobacillus stearotherm 22.6 1.4E+02 0.0048 22.5 5.1 54 202-258 4-57 (119)
498 3s55_A Putative short-chain de 22.4 3.3E+02 0.011 22.5 8.8 34 33-67 7-43 (281)
499 3grp_A 3-oxoacyl-(acyl carrier 22.3 1.4E+02 0.0047 25.0 5.7 39 32-71 23-64 (266)
500 1gpj_A Glutamyl-tRNA reductase 22.1 1.1E+02 0.0038 27.7 5.3 35 34-70 165-203 (404)
No 1
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.82 E-value=2.9e-19 Score=160.51 Aligned_cols=171 Identities=21% Similarity=0.284 Sum_probs=113.6
Q ss_pred cCceeeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeC-CHHHHHHhhHHHHHHHHHHh
Q 024311 8 GFLKCWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDL-SAETIRCTTVPNVLANLEQA 86 (269)
Q Consensus 8 ~G~~vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~-~~~vl~~~~~~Nl~~N~~~~ 86 (269)
.|+.+|+++..|++++.... ...++++|||||||+|..++.++..|+.+|+++|+ ++++++. ++.|...|
T Consensus 56 ~g~~~~~~~~~l~~~l~~~~----~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~-----a~~n~~~N 126 (281)
T 3bzb_A 56 WTSHVWSGARALADTLCWQP----ELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNS-----LESNIREH 126 (281)
T ss_dssp ------CHHHHHHHHHHHCG----GGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHH-----HHHHHHTT
T ss_pred CCceeecHHHHHHHHHHhcc----hhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHH-----HHHHHHHh
Confidence 47889999999999998864 23578899999999999999999988879999999 8999844 44444322
Q ss_pred hhhhccCCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccc
Q 024311 87 RERQSRQPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRR 166 (269)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 166 (269)
....... . .....++++..++|.+......
T Consensus 127 ~~~~~~~-----~---~~~~~~v~~~~~~~~~~~~~~~------------------------------------------ 156 (281)
T 3bzb_A 127 TANSCSS-----E---TVKRASPKVVPYRWGDSPDSLQ------------------------------------------ 156 (281)
T ss_dssp CC------------------CCCEEEECCTTSCTHHHH------------------------------------------
T ss_pred hhhhccc-----c---cCCCCCeEEEEecCCCccHHHH------------------------------------------
Confidence 1000000 0 0001357777788886321000
Q ss_pred cccccCchhhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcC---C-CCeEEEEEEcccccccCcchHHHHH
Q 024311 167 SRKLSGSRAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLR---P-PYGVVYLATKKNYVGFNNAARHLRS 242 (269)
Q Consensus 167 ~~~l~gs~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~---~-p~g~~~va~k~~~fg~~~~~~~F~~ 242 (269)
. .....+||+|+++|++|+...++.+++.+.++|+ + ++|++++....++.........|++
T Consensus 157 --------------~-~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~ 221 (281)
T 3bzb_A 157 --------------R-CTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFR 221 (281)
T ss_dssp --------------H-HHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHH
T ss_pred --------------h-hccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHH
Confidence 0 0023589999999999999999999999999998 4 3899888766654433445789999
Q ss_pred HhhhcC-ceeE
Q 024311 243 LVDEEG-IFGA 252 (269)
Q Consensus 243 ~~~~~g-~~~~ 252 (269)
.+++.| |-..
T Consensus 222 ~l~~~G~f~v~ 232 (281)
T 3bzb_A 222 LVNADGALIAE 232 (281)
T ss_dssp HHHHSTTEEEE
T ss_pred HHHhcCCEEEE
Confidence 999999 6433
No 2
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.51 E-value=3.3e-13 Score=117.54 Aligned_cols=134 Identities=20% Similarity=0.285 Sum_probs=99.0
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
..++++|||+|||+|..+..++..++.+|+++|+++.+++. .+.+.. ..++.+.
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~-----a~~~~~---------------------~~~~~~~ 95 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTE-----AKRKTT---------------------SPVVCYE 95 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHH-----HHHHCC---------------------CTTEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHH-----HHHhhc---------------------cCCeEEE
Confidence 34789999999999999999888888799999999998843 222210 1345665
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|....+ ...++||+|
T Consensus 96 ~~d~~~~~---------------------------------------------------------------~~~~~fD~v 112 (253)
T 3g5l_A 96 QKAIEDIA---------------------------------------------------------------IEPDAYNVV 112 (253)
T ss_dssp ECCGGGCC---------------------------------------------------------------CCTTCEEEE
T ss_pred EcchhhCC---------------------------------------------------------------CCCCCeEEE
Confidence 55543321 134689999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccc-------------------------ccc--------------
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNY-------------------------VGF-------------- 233 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~-------------------------fg~-------------- 233 (269)
+++.++++......+++.+.++|+ |+|++++.....+ |..
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (253)
T 3g5l_A 113 LSSLALHYIASFDDICKKVYINLK-SSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQK 191 (253)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEE
T ss_pred EEchhhhhhhhHHHHHHHHHHHcC-CCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCcc
Confidence 999999999999999999999999 8999998732211 100
Q ss_pred -CcchHHHHHHhhhcCceeEEEEe
Q 024311 234 -NNAARHLRSLVDEEGIFGAHLIK 256 (269)
Q Consensus 234 -~~~~~~F~~~~~~~g~~~~~~~~ 256 (269)
..+..++.+.+++.||-..++..
T Consensus 192 ~~~t~~~~~~~l~~aGF~~~~~~e 215 (253)
T 3g5l_A 192 YHRTVTTYIQTLLKNGFQINSVIE 215 (253)
T ss_dssp ECCCHHHHHHHHHHTTEEEEEEEC
T ss_pred EecCHHHHHHHHHHcCCeeeeeec
Confidence 01678899999999986555543
No 3
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.50 E-value=4e-13 Score=113.35 Aligned_cols=147 Identities=18% Similarity=0.267 Sum_probs=102.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..+..++.....+|+++|+++.+++. .+.|+... ...+++++..+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~-----a~~~~~~~-----------------~~~~~~~~~~~ 100 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEI-----ALKNIADA-----------------NLNDRIQIVQG 100 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHH-----HHHHHHHT-----------------TCTTTEEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHH-----HHHHHHhc-----------------cccCceEEEEc
Confidence 334999999999999988877643489999999999844 34444321 01235666666
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ...++||+|++
T Consensus 101 d~~~~~---------------------------------------------------------------~~~~~~D~v~~ 117 (219)
T 3dlc_A 101 DVHNIP---------------------------------------------------------------IEDNYADLIVS 117 (219)
T ss_dssp BTTBCS---------------------------------------------------------------SCTTCEEEEEE
T ss_pred CHHHCC---------------------------------------------------------------CCcccccEEEE
Confidence 654321 13468999999
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccc------------------------ccCcchHHHHHHhhhcCce
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYV------------------------GFNNAARHLRSLVDEEGIF 250 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~f------------------------g~~~~~~~F~~~~~~~g~~ 250 (269)
..++++......+++.+.++|+ |+|++++....... .......++.+.+++.||-
T Consensus 118 ~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 196 (219)
T 3dlc_A 118 RGSVFFWEDVATAFREIYRILK-SGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGIS 196 (219)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCS
T ss_pred CchHhhccCHHHHHHHHHHhCC-CCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCC
Confidence 9999999999999999999999 89999987411000 0001347788999999986
Q ss_pred eEEEEeeecCcceEEEEeC
Q 024311 251 GAHLIKEMTDRDIWKFFLK 269 (269)
Q Consensus 251 ~~~~~~~~~~~~i~~~~~~ 269 (269)
..++. ..+...|-.++|
T Consensus 197 ~v~~~--~~~~~~~~~~~k 213 (219)
T 3dlc_A 197 SYEII--LGDEGFWIIISK 213 (219)
T ss_dssp SEEEE--EETTEEEEEEBC
T ss_pred eEEEE--ecCCceEEEEec
Confidence 55553 234455666654
No 4
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.47 E-value=6.7e-13 Score=111.10 Aligned_cols=142 Identities=18% Similarity=0.249 Sum_probs=96.7
Q ss_pred CCCCCCccC------ceeeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHh
Q 024311 1 MISSKPDGF------LKCWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 1 ~~~g~ye~G------~~vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~ 74 (269)
+|.|+|.|- ...++.+-.+.+.+.+.... ....++.+|||||||+|..++.++..++.+|++.|+++++++
T Consensus 5 ii~g~~~g~~l~~~~~~~rp~~~~~~~~l~~~l~~-~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~-- 81 (189)
T 3p9n_A 5 IIGGVAGGRRIAVPPRGTRPTTDRVRESLFNIVTA-RRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAA-- 81 (189)
T ss_dssp CCSSTTTTCEEECCSCCC---CHHHHHHHHHHHHH-HSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHH--
T ss_pred EEeeccCCcEecCCCCCCccCcHHHHHHHHHHHHh-ccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHH--
Confidence 467777753 34566666666666554421 112578999999999999999877788889999999999984
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCC
Q 024311 75 TVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQD 154 (269)
Q Consensus 75 ~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~ 154 (269)
..+.|+..+. . .++++..+|+.+...
T Consensus 82 ---~a~~~~~~~~-----------------~-~~v~~~~~d~~~~~~--------------------------------- 107 (189)
T 3p9n_A 82 ---VIARNIEALG-----------------L-SGATLRRGAVAAVVA--------------------------------- 107 (189)
T ss_dssp ---HHHHHHHHHT-----------------C-SCEEEEESCHHHHHH---------------------------------
T ss_pred ---HHHHHHHHcC-----------------C-CceEEEEccHHHHHh---------------------------------
Confidence 4455554431 1 356776666543210
Q ss_pred CcccccCCcccccccccCchhhhhhcccccCCCCccEEEEecccccc--CCHHHHHHHHHH--hcCCCCeEEEEEEccc
Q 024311 155 GSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILLTEIPYSV--TSLKKLYLLIKK--CLRPPYGVVYLATKKN 229 (269)
Q Consensus 155 ~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIlasD~iY~~--~~~~~L~~~l~~--~L~~p~g~~~va~k~~ 229 (269)
.....+||+|++ |..|.. ...+.+++.+.+ +|+ |+|++++.+...
T Consensus 108 ----------------------------~~~~~~fD~i~~-~~p~~~~~~~~~~~l~~~~~~~~L~-pgG~l~~~~~~~ 156 (189)
T 3p9n_A 108 ----------------------------AGTTSPVDLVLA-DPPYNVDSADVDAILAALGTNGWTR-EGTVAVVERATT 156 (189)
T ss_dssp ----------------------------HCCSSCCSEEEE-CCCTTSCHHHHHHHHHHHHHSSSCC-TTCEEEEEEETT
T ss_pred ----------------------------hccCCCccEEEE-CCCCCcchhhHHHHHHHHHhcCccC-CCeEEEEEecCC
Confidence 012458999998 455655 567888899988 898 899999886553
No 5
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.46 E-value=4e-12 Score=108.02 Aligned_cols=145 Identities=14% Similarity=0.181 Sum_probs=100.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC--CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG--AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g--a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
.+.+|||+|||+|..+..++..+ ..+|++.|+++.+++. .+.+...+. . +++.+.
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~-----a~~~~~~~~-----------------~-~~~~~~ 93 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNY-----AWEKVNKLG-----------------L-KNVEVL 93 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHH-----HHHHHHHHT-----------------C-TTEEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHH-----HHHHHHHcC-----------------C-CcEEEE
Confidence 57899999999999998877764 3489999999999844 344443220 1 246666
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|....+ ...++||+|
T Consensus 94 ~~d~~~~~---------------------------------------------------------------~~~~~fD~v 110 (219)
T 3dh0_A 94 KSEENKIP---------------------------------------------------------------LPDNTVDFI 110 (219)
T ss_dssp ECBTTBCS---------------------------------------------------------------SCSSCEEEE
T ss_pred ecccccCC---------------------------------------------------------------CCCCCeeEE
Confidence 56544321 134589999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccc-------cCcchHHHHHHhhhcCceeEEEEeeecCcceEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVG-------FNNAARHLRSLVDEEGIFGAHLIKEMTDRDIWK 265 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg-------~~~~~~~F~~~~~~~g~~~~~~~~~~~~~~i~~ 265 (269)
+++.++++......+++.+.++|+ |+|++++..-..... ..-...++.+.+++.||-..++ .+.......-
T Consensus 111 ~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~-~~~~~~~~~~ 188 (219)
T 3dh0_A 111 FMAFTFHELSEPLKFLEELKRVAK-PFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV-VEVGKYCFGV 188 (219)
T ss_dssp EEESCGGGCSSHHHHHHHHHHHEE-EEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE-EEETTTEEEE
T ss_pred EeehhhhhcCCHHHHHHHHHHHhC-CCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE-EeeCCceEEE
Confidence 999999999999999999999999 899988874221100 0114688999999999754444 4444443333
Q ss_pred EE
Q 024311 266 FF 267 (269)
Q Consensus 266 ~~ 267 (269)
+.
T Consensus 189 ~~ 190 (219)
T 3dh0_A 189 YA 190 (219)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 6
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.46 E-value=1.9e-12 Score=113.95 Aligned_cols=134 Identities=16% Similarity=0.168 Sum_probs=98.0
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
..+.+|||+|||+|..++.++..+..+|+++|+++.+++. .+.|.... .+.+++++..
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~-----a~~~~~~~-----------------~~~~~v~~~~ 102 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDI-----FNRNARQS-----------------GLQNRVTGIV 102 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHH-----HHHHHHHT-----------------TCTTTEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHH-----HHHHHHHc-----------------CCCcCcEEEE
Confidence 4688999999999999998888766699999999999844 34444321 1234577777
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|+.+.+ ...++||+|+
T Consensus 103 ~d~~~~~---------------------------------------------------------------~~~~~fD~i~ 119 (267)
T 3kkz_A 103 GSMDDLP---------------------------------------------------------------FRNEELDLIW 119 (267)
T ss_dssp CCTTSCC---------------------------------------------------------------CCTTCEEEEE
T ss_pred cChhhCC---------------------------------------------------------------CCCCCEEEEE
Confidence 7765432 1345899999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccc---------------ccCcchHHHHHHhhhcCceeEEE
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYV---------------GFNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~f---------------g~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
+..++++. ..+.+++.+.++|+ |+|++++....... ..-.+...+.+.+++.||...++
T Consensus 120 ~~~~~~~~-~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 120 SEGAIYNI-GFERGLNEWRKYLK-KGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp ESSCGGGT-CHHHHHHHHGGGEE-EEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred EcCCceec-CHHHHHHHHHHHcC-CCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 99999998 78999999999999 89999887532110 01124567778899999754444
No 7
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.45 E-value=3e-12 Score=111.38 Aligned_cols=150 Identities=16% Similarity=0.144 Sum_probs=103.5
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccC
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQ 93 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~ 93 (269)
+.+..+...+..... ..-.+.+|||+|||+|..++.++..+..+|+++|+++.+++. .+.|...+
T Consensus 28 ~~~~~~~~~~l~~l~---~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~-----a~~~~~~~------- 92 (257)
T 3f4k_A 28 PGSPEATRKAVSFIN---ELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEI-----FNENAVKA------- 92 (257)
T ss_dssp SCCHHHHHHHHTTSC---CCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHH-----HHHHHHHT-------
T ss_pred CCCHHHHHHHHHHHh---cCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHH-----HHHHHHHc-------
Confidence 444444554444321 233677999999999999988887765699999999999844 34444321
Q ss_pred CCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCc
Q 024311 94 PESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGS 173 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs 173 (269)
.+..++++..+|+...+
T Consensus 93 ----------~~~~~~~~~~~d~~~~~----------------------------------------------------- 109 (257)
T 3f4k_A 93 ----------NCADRVKGITGSMDNLP----------------------------------------------------- 109 (257)
T ss_dssp ----------TCTTTEEEEECCTTSCS-----------------------------------------------------
T ss_pred ----------CCCCceEEEECChhhCC-----------------------------------------------------
Confidence 02234677777764421
Q ss_pred hhhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccc---------------ccCcchH
Q 024311 174 RAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYV---------------GFNNAAR 238 (269)
Q Consensus 174 ~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~f---------------g~~~~~~ 238 (269)
...++||+|++..++++. ..+.+++.+.++|+ |+|++++....... ..-.+..
T Consensus 110 ----------~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (257)
T 3f4k_A 110 ----------FQNEELDLIWSEGAIYNI-GFERGMNEWSKYLK-KGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIP 177 (257)
T ss_dssp ----------SCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEE-EEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHH
T ss_pred ----------CCCCCEEEEEecChHhhc-CHHHHHHHHHHHcC-CCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHH
Confidence 134689999999999998 68899999999999 89999887532100 0012456
Q ss_pred HHHHHhhhcCceeEE
Q 024311 239 HLRSLVDEEGIFGAH 253 (269)
Q Consensus 239 ~F~~~~~~~g~~~~~ 253 (269)
++.+.+++.||-..+
T Consensus 178 ~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 178 TCIDKMERAGYTPTA 192 (257)
T ss_dssp HHHHHHHHTTEEEEE
T ss_pred HHHHHHHHCCCeEEE
Confidence 778899999975444
No 8
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.45 E-value=5.6e-12 Score=110.79 Aligned_cols=151 Identities=21% Similarity=0.199 Sum_probs=104.1
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccC
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQ 93 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~ 93 (269)
++...+.+.+.+.. ....+.+|||+|||+|...+.++.....+|+++|+++.+++. .+.+....
T Consensus 44 ~~~~~~~~~l~~~~----~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~-----a~~~~~~~------- 107 (273)
T 3bus_A 44 DATDRLTDEMIALL----DVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQ-----ANARATAA------- 107 (273)
T ss_dssp HHHHHHHHHHHHHS----CCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHH-----HHHHHHHT-------
T ss_pred HHHHHHHHHHHHhc----CCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHH-----HHHHHHhc-------
Confidence 44556666666653 134678999999999999988776433499999999998844 33333221
Q ss_pred CCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCc
Q 024311 94 PESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGS 173 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs 173 (269)
....++++..+|....+
T Consensus 108 ----------~~~~~~~~~~~d~~~~~----------------------------------------------------- 124 (273)
T 3bus_A 108 ----------GLANRVTFSYADAMDLP----------------------------------------------------- 124 (273)
T ss_dssp ----------TCTTTEEEEECCTTSCC-----------------------------------------------------
T ss_pred ----------CCCcceEEEECccccCC-----------------------------------------------------
Confidence 01235666666654421
Q ss_pred hhhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccc-------------------cccC
Q 024311 174 RAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNY-------------------VGFN 234 (269)
Q Consensus 174 ~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~-------------------fg~~ 234 (269)
...++||+|++.+++++....+.+++.+.++|+ |+|++++...... .+..
T Consensus 125 ----------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (273)
T 3bus_A 125 ----------FEDASFDAVWALESLHHMPDRGRALREMARVLR-PGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSL 193 (273)
T ss_dssp ----------SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEE-EEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCC
T ss_pred ----------CCCCCccEEEEechhhhCCCHHHHHHHHHHHcC-CCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCC
Confidence 134589999999999999999999999999999 8999888642110 0111
Q ss_pred cchHHHHHHhhhcCceeEEE
Q 024311 235 NAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 235 ~~~~~F~~~~~~~g~~~~~~ 254 (269)
.+..++.+.+++.||-..++
T Consensus 194 ~~~~~~~~~l~~aGf~~~~~ 213 (273)
T 3bus_A 194 GGIDEYESDVRQAELVVTST 213 (273)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHcCCeEEEE
Confidence 24577888899999754433
No 9
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.44 E-value=4.8e-12 Score=109.83 Aligned_cols=146 Identities=14% Similarity=0.129 Sum_probs=102.3
Q ss_pred eeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhc
Q 024311 12 CWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQS 91 (269)
Q Consensus 12 vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~ 91 (269)
.|+++.-+++.+. ..++.+|||+|||+|..+..++..+. +|+++|+++.+++. .+.+...+.
T Consensus 6 ~~~~~~~~~~~~~--------~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~-----a~~~~~~~~---- 67 (239)
T 1xxl_A 6 HHHSLGLMIKTAE--------CRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEV-----ASSFAQEKG---- 67 (239)
T ss_dssp CHHHHHHHHHHHT--------CCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHH-----HHHHHHHHT----
T ss_pred cCCCcchHHHHhC--------cCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHH-----HHHHHHHcC----
Confidence 3555555555543 23678999999999999998888876 89999999999844 344443220
Q ss_pred cCCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCccccccccc
Q 024311 92 RQPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLS 171 (269)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (269)
.+++++..+|....+
T Consensus 68 --------------~~~v~~~~~d~~~~~--------------------------------------------------- 82 (239)
T 1xxl_A 68 --------------VENVRFQQGTAESLP--------------------------------------------------- 82 (239)
T ss_dssp --------------CCSEEEEECBTTBCC---------------------------------------------------
T ss_pred --------------CCCeEEEecccccCC---------------------------------------------------
Confidence 124666666654321
Q ss_pred CchhhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccc----------------c---c
Q 024311 172 GSRAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNY----------------V---G 232 (269)
Q Consensus 172 gs~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~----------------f---g 232 (269)
...++||+|+++.++++....+.+++.+.++|+ |+|++++...... . .
T Consensus 83 ------------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (239)
T 1xxl_A 83 ------------FPDDSFDIITCRYAAHHFSDVRKAVREVARVLK-QDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHV 149 (239)
T ss_dssp ------------SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCC
T ss_pred ------------CCCCcEEEEEECCchhhccCHHHHHHHHHHHcC-CCcEEEEEEcCCCCChhHHHHHHHHHHhcccccc
Confidence 134689999999999999999999999999999 8999888632110 0 0
Q ss_pred cCcchHHHHHHhhhcCceeEE
Q 024311 233 FNNAARHLRSLVDEEGIFGAH 253 (269)
Q Consensus 233 ~~~~~~~F~~~~~~~g~~~~~ 253 (269)
..-...++.+.+++.||-..+
T Consensus 150 ~~~~~~~~~~ll~~aGf~~~~ 170 (239)
T 1xxl_A 150 RESSLSEWQAMFSANQLAYQD 170 (239)
T ss_dssp CCCBHHHHHHHHHHTTEEEEE
T ss_pred CCCCHHHHHHHHHHCCCcEEE
Confidence 112467788899999974333
No 10
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.43 E-value=2.9e-12 Score=111.38 Aligned_cols=146 Identities=16% Similarity=0.069 Sum_probs=101.1
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCC
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESS 97 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~ 97 (269)
..++.+.... ....+.+|||+|||+|..++.++.....+|+++|+++.+++. .+.|....
T Consensus 23 ~~~~~l~~~~----~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~-----a~~~~~~~----------- 82 (256)
T 1nkv_A 23 EKYATLGRVL----RMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQ-----AKRRAEEL----------- 82 (256)
T ss_dssp HHHHHHHHHT----CCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHH-----HHHHHHHT-----------
T ss_pred HHHHHHHHhc----CCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHH-----HHHHHHhc-----------
Confidence 3444554442 134678999999999999987776523389999999999843 44444321
Q ss_pred CCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhh
Q 024311 98 LTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWE 177 (269)
Q Consensus 98 ~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~ 177 (269)
.+..++.+..+|+.+.+
T Consensus 83 ------~~~~~v~~~~~d~~~~~--------------------------------------------------------- 99 (256)
T 1nkv_A 83 ------GVSERVHFIHNDAAGYV--------------------------------------------------------- 99 (256)
T ss_dssp ------TCTTTEEEEESCCTTCC---------------------------------------------------------
T ss_pred ------CCCcceEEEECChHhCC---------------------------------------------------------
Confidence 02235777767665421
Q ss_pred hhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccc----------------cCcchHHHH
Q 024311 178 RASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVG----------------FNNAARHLR 241 (269)
Q Consensus 178 ~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg----------------~~~~~~~F~ 241 (269)
..++||+|++..++++......+++.+.++|+ |+|++++........ .-.+..++.
T Consensus 100 -------~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (256)
T 1nkv_A 100 -------ANEKCDVAACVGATWIAGGFAGAEELLAQSLK-PGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLV 171 (256)
T ss_dssp -------CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEE-EEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHH
T ss_pred -------cCCCCCEEEECCChHhcCCHHHHHHHHHHHcC-CCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHH
Confidence 13589999999999999889999999999999 899988864321000 011457888
Q ss_pred HHhhhcCceeEEE
Q 024311 242 SLVDEEGIFGAHL 254 (269)
Q Consensus 242 ~~~~~~g~~~~~~ 254 (269)
+.+++.||-..++
T Consensus 172 ~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 172 GAFDDLGYDVVEM 184 (256)
T ss_dssp HHHHTTTBCCCEE
T ss_pred HHHHHCCCeeEEE
Confidence 9999999854444
No 11
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.41 E-value=7.3e-13 Score=124.10 Aligned_cols=104 Identities=24% Similarity=0.257 Sum_probs=78.2
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 32 LSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
..++|++|||||||+|+++++||+.||++|++.|.++ +++. .+.++..|. +..+|.+
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~-----a~~~~~~n~-----------------~~~~i~~ 136 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQ-----AREVVRFNG-----------------LEDRVHV 136 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHH-----HHHHHHHTT-----------------CTTTEEE
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHH-----HHHHHHHcC-----------------CCceEEE
Confidence 3578999999999999999999999999999999986 5532 333443331 2345666
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
+.++.++. ..+++||+
T Consensus 137 i~~~~~~~----------------------------------------------------------------~lpe~~Dv 152 (376)
T 4hc4_A 137 LPGPVETV----------------------------------------------------------------ELPEQVDA 152 (376)
T ss_dssp EESCTTTC----------------------------------------------------------------CCSSCEEE
T ss_pred Eeeeeeee----------------------------------------------------------------cCCccccE
Confidence 66654432 13468999
Q ss_pred EEE---eccccccCCHHHHHHHHHHhcCCCCeEEE
Q 024311 192 ILL---TEIPYSVTSLKKLYLLIKKCLRPPYGVVY 223 (269)
Q Consensus 192 Ila---sD~iY~~~~~~~L~~~l~~~L~~p~g~~~ 223 (269)
||+ ...+..+..++.++...+++|+ |+|+++
T Consensus 153 ivsE~~~~~l~~e~~l~~~l~a~~r~Lk-p~G~~i 186 (376)
T 4hc4_A 153 IVSEWMGYGLLHESMLSSVLHARTKWLK-EGGLLL 186 (376)
T ss_dssp EECCCCBTTBTTTCSHHHHHHHHHHHEE-EEEEEE
T ss_pred EEeecccccccccchhhhHHHHHHhhCC-CCceEC
Confidence 997 6677788899999999999999 666544
No 12
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.41 E-value=3.7e-12 Score=110.85 Aligned_cols=149 Identities=15% Similarity=0.162 Sum_probs=104.2
Q ss_pred eeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhh
Q 024311 12 CWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQ 90 (269)
Q Consensus 12 vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~ 90 (269)
.++.+..+++.+.+.. ....+.+|||+|||+|..++.++.. +. +|+++|+++.+++. .+.+..
T Consensus 36 ~~~~~~~~~~~~~~~~----~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~-----a~~~~~------ 99 (266)
T 3ujc_A 36 ISSGGLEATKKILSDI----ELNENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNM-----ANERVS------ 99 (266)
T ss_dssp CSTTHHHHHHHHTTTC----CCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHH-----HHHTCC------
T ss_pred cccchHHHHHHHHHhc----CCCCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHH-----HHHHhh------
Confidence 4555666666666553 2346789999999999999887775 55 89999999998843 222210
Q ss_pred ccCCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccc
Q 024311 91 SRQPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKL 170 (269)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l 170 (269)
..+++++..+|....+
T Consensus 100 --------------~~~~~~~~~~d~~~~~-------------------------------------------------- 115 (266)
T 3ujc_A 100 --------------GNNKIIFEANDILTKE-------------------------------------------------- 115 (266)
T ss_dssp --------------SCTTEEEEECCTTTCC--------------------------------------------------
T ss_pred --------------cCCCeEEEECccccCC--------------------------------------------------
Confidence 0035666666654421
Q ss_pred cCchhhhhhcccccCCCCccEEEEecccccc--CCHHHHHHHHHHhcCCCCeEEEEEEccccc---------------c-
Q 024311 171 SGSRAWERASEADQGEGGYDVILLTEIPYSV--TSLKKLYLLIKKCLRPPYGVVYLATKKNYV---------------G- 232 (269)
Q Consensus 171 ~gs~~W~~~~~~~~~~~~fDlIlasD~iY~~--~~~~~L~~~l~~~L~~p~g~~~va~k~~~f---------------g- 232 (269)
...++||+|++.+++++. .....+++.+.++|+ |+|++++....... +
T Consensus 116 -------------~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (266)
T 3ujc_A 116 -------------FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLK-PTGTLLITDYCATEKENWDDEFKEYVKQRKY 181 (266)
T ss_dssp -------------CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEEESCGGGCCHHHHHHHHHHTC
T ss_pred -------------CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcC-CCCEEEEEEeccCCcccchHHHHHHHhcCCC
Confidence 134689999999999999 888999999999999 89999887522110 0
Q ss_pred cCcchHHHHHHhhhcCceeEEE
Q 024311 233 FNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 233 ~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
......++.+.+++.||-..++
T Consensus 182 ~~~~~~~~~~~l~~~Gf~~~~~ 203 (266)
T 3ujc_A 182 TLITVEEYADILTACNFKNVVS 203 (266)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEE
T ss_pred CCCCHHHHHHHHHHcCCeEEEE
Confidence 0124678889999999854444
No 13
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.41 E-value=3.3e-12 Score=110.13 Aligned_cols=133 Identities=13% Similarity=0.029 Sum_probs=94.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
+++.+|||+|||+|..++.++..+. +|+++|+++.+++. .+.+.... ....++.+..
T Consensus 65 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~-----a~~~~~~~-----------------~~~~~v~~~~ 121 (235)
T 3lcc_A 65 LPLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAK-----ANETYGSS-----------------PKAEYFSFVK 121 (235)
T ss_dssp SCCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHH-----HHHHHTTS-----------------GGGGGEEEEC
T ss_pred CCCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHH-----HHHHhhcc-----------------CCCcceEEEE
Confidence 3556999999999999988887766 89999999999844 33333210 0113566666
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|+...+ ...+||+|+
T Consensus 122 ~d~~~~~----------------------------------------------------------------~~~~fD~v~ 137 (235)
T 3lcc_A 122 EDVFTWR----------------------------------------------------------------PTELFDLIF 137 (235)
T ss_dssp CCTTTCC----------------------------------------------------------------CSSCEEEEE
T ss_pred CchhcCC----------------------------------------------------------------CCCCeeEEE
Confidence 6654321 234899999
Q ss_pred EeccccccC--CHHHHHHHHHHhcCCCCeEEEEEEccccccc-----CcchHHHHHHhhhcCceeEEE
Q 024311 194 LTEIPYSVT--SLKKLYLLIKKCLRPPYGVVYLATKKNYVGF-----NNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 194 asD~iY~~~--~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~-----~~~~~~F~~~~~~~g~~~~~~ 254 (269)
++.+++... ....+++.+.++|+ |+|++++..-...... .-...++.+.+++.||-..++
T Consensus 138 ~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 138 DYVFFCAIEPEMRPAWAKSMYELLK-PDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp EESSTTTSCGGGHHHHHHHHHHHEE-EEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred EChhhhcCCHHHHHHHHHHHHHHCC-CCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 999999876 88899999999999 8999887642211100 124678999999999754443
No 14
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.40 E-value=4.7e-12 Score=111.53 Aligned_cols=142 Identities=8% Similarity=0.134 Sum_probs=96.7
Q ss_pred cHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCC
Q 024311 15 SSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQP 94 (269)
Q Consensus 15 as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~ 94 (269)
-++.|+.++. ..+++.+|||+|||+|..++.++..+..+|++.|+++.+++. .+.|+..+.
T Consensus 36 d~~ll~~~~~-------~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~-----a~~n~~~~~------- 96 (259)
T 3lpm_A 36 DAVLLAKFSY-------LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADM-----AKRSVAYNQ------- 96 (259)
T ss_dssp HHHHHHHHCC-------CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHH-----HHHHHHHTT-------
T ss_pred HHHHHHHHhc-------CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHH-----HHHHHHHCC-------
Confidence 3666766651 112578999999999999999988877799999999999844 455554331
Q ss_pred CCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCch
Q 024311 95 ESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSR 174 (269)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~ 174 (269)
...+++++.+|..+...
T Consensus 97 ----------~~~~v~~~~~D~~~~~~----------------------------------------------------- 113 (259)
T 3lpm_A 97 ----------LEDQIEIIEYDLKKITD----------------------------------------------------- 113 (259)
T ss_dssp ----------CTTTEEEECSCGGGGGG-----------------------------------------------------
T ss_pred ----------CcccEEEEECcHHHhhh-----------------------------------------------------
Confidence 22356776666554210
Q ss_pred hhhhhcccccCCCCccEEEEecccccc--------------------CCHHHHHHHHHHhcCCCCeEEEEEEcccccccC
Q 024311 175 AWERASEADQGEGGYDVILLTEIPYSV--------------------TSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFN 234 (269)
Q Consensus 175 ~W~~~~~~~~~~~~fDlIlasD~iY~~--------------------~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~ 234 (269)
....++||+|++.-..|.. ..++.+++.+.++|+ |+|++++....
T Consensus 114 --------~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~------ 178 (259)
T 3lpm_A 114 --------LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLK-QGGKANFVHRP------ 178 (259)
T ss_dssp --------TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEE-EEEEEEEEECT------
T ss_pred --------hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHcc-CCcEEEEEEcH------
Confidence 0134689999984433332 234568889999999 89999986543
Q ss_pred cchHHHHHHhhhcCceeEE
Q 024311 235 NAARHLRSLVDEEGIFGAH 253 (269)
Q Consensus 235 ~~~~~F~~~~~~~g~~~~~ 253 (269)
....+++..+++.|+...+
T Consensus 179 ~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 179 ERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp TTHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHCCCceEE
Confidence 2467899999998874333
No 15
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.40 E-value=3.7e-12 Score=107.15 Aligned_cols=126 Identities=12% Similarity=0.106 Sum_probs=92.2
Q ss_pred CCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecCC
Q 024311 36 GKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAGD 115 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d 115 (269)
+.+|||+|||+|.....++..|. +|++.|+++.+++.+ +.+. +++.+..+|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a-----~~~~-----------------------~~~~~~~~d 92 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELA-----RQTH-----------------------PSVTFHHGT 92 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHH-----HHHC-----------------------TTSEEECCC
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHH-----HHhC-----------------------CCCeEEeCc
Confidence 77999999999999988888877 899999999988432 2221 234555555
Q ss_pred CCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEEe
Q 024311 116 WEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILLT 195 (269)
Q Consensus 116 w~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIlas 195 (269)
....+ ...++||+|++.
T Consensus 93 ~~~~~---------------------------------------------------------------~~~~~fD~v~~~ 109 (203)
T 3h2b_A 93 ITDLS---------------------------------------------------------------DSPKRWAGLLAW 109 (203)
T ss_dssp GGGGG---------------------------------------------------------------GSCCCEEEEEEE
T ss_pred ccccc---------------------------------------------------------------cCCCCeEEEEeh
Confidence 43321 134689999999
Q ss_pred ccccccC--CHHHHHHHHHHhcCCCCeEEEEEEcccc----cc------cCcchHHHHHHhhhcCceeEEE
Q 024311 196 EIPYSVT--SLKKLYLLIKKCLRPPYGVVYLATKKNY----VG------FNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 196 D~iY~~~--~~~~L~~~l~~~L~~p~g~~~va~k~~~----fg------~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
.++++.. ....+++.+.++|+ |+|++++...... +. ..-...++.+.+++.||-..++
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 179 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVE-DGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSS 179 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEE-EEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEE
T ss_pred hhHhcCCHHHHHHHHHHHHHHcC-CCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEE
Confidence 9999885 88999999999999 8999988752211 00 0014788999999999744443
No 16
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.40 E-value=7.7e-12 Score=107.46 Aligned_cols=143 Identities=17% Similarity=0.179 Sum_probs=100.5
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
..++.+|||+|||+|..+..++... ..+|+++|+++.+++. .+.+... ..++++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~-----a~~~~~~--------------------~~~~~~ 96 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEI-----AKNRFRG--------------------NLKVKY 96 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHH-----HHHHTCS--------------------CTTEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHH-----HHHhhcc--------------------CCCEEE
Confidence 3467899999999999998777663 3489999999998843 3333210 124566
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
..+|....+ ..++||+
T Consensus 97 ~~~d~~~~~----------------------------------------------------------------~~~~fD~ 112 (234)
T 3dtn_A 97 IEADYSKYD----------------------------------------------------------------FEEKYDM 112 (234)
T ss_dssp EESCTTTCC----------------------------------------------------------------CCSCEEE
T ss_pred EeCchhccC----------------------------------------------------------------CCCCceE
Confidence 656544321 1268999
Q ss_pred EEEeccccccCCHH--HHHHHHHHhcCCCCeEEEEEEccccc-------------------c----------------cC
Q 024311 192 ILLTEIPYSVTSLK--KLYLLIKKCLRPPYGVVYLATKKNYV-------------------G----------------FN 234 (269)
Q Consensus 192 IlasD~iY~~~~~~--~L~~~l~~~L~~p~g~~~va~k~~~f-------------------g----------------~~ 234 (269)
|+++.++++..... .+++.+.++|+ |+|+++++.....- | ..
T Consensus 113 v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (234)
T 3dtn_A 113 VVSALSIHHLEDEDKKELYKRSYSILK-ESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKD 191 (234)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcC-CCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccc
Confidence 99999999887555 48999999999 89999987522100 0 01
Q ss_pred cchHHHHHHhhhcCceeEEEEeeecCcceEE
Q 024311 235 NAARHLRSLVDEEGIFGAHLIKEMTDRDIWK 265 (269)
Q Consensus 235 ~~~~~F~~~~~~~g~~~~~~~~~~~~~~i~~ 265 (269)
-+..++.+.+++.||-.+++.+..-.-.+|.
T Consensus 192 ~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~ 222 (234)
T 3dtn_A 192 IEMNQQLNWLKEAGFRDVSCIYKYYQFAVMF 222 (234)
T ss_dssp CBHHHHHHHHHHTTCEEEEEEEEETTEEEEE
T ss_pred cCHHHHHHHHHHcCCCceeeeeeecceeEEE
Confidence 1446777899999998888877766666654
No 17
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.40 E-value=9.6e-12 Score=107.07 Aligned_cols=129 Identities=20% Similarity=0.209 Sum_probs=94.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..+..++..++ +|+++|+++.+++. .+.+. ...++++..+
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~-----a~~~~---------------------~~~~~~~~~~ 105 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQK-----GKERG---------------------EGPDLSFIKG 105 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHH-----HHTTT---------------------CBTTEEEEEC
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHH-----HHhhc---------------------ccCCceEEEc
Confidence 678999999999999998888877 89999999998843 22221 0134566555
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ...++||+|++
T Consensus 106 d~~~~~---------------------------------------------------------------~~~~~fD~v~~ 122 (242)
T 3l8d_A 106 DLSSLP---------------------------------------------------------------FENEQFEAIMA 122 (242)
T ss_dssp BTTBCS---------------------------------------------------------------SCTTCEEEEEE
T ss_pred chhcCC---------------------------------------------------------------CCCCCccEEEE
Confidence 544321 13468999999
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccc-----------c-----cCcchHHHHHHhhhcCceeEEE
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYV-----------G-----FNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~f-----------g-----~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
..++++......+++.+.++|+ |+|++++....... + ..-...++.+.+++.||-..+.
T Consensus 123 ~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 123 INSLEWTEEPLRALNEIKRVLK-SDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp ESCTTSSSCHHHHHHHHHHHEE-EEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred cChHhhccCHHHHHHHHHHHhC-CCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 9999999999999999999999 89999887521100 0 0013457889999999854444
No 18
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.40 E-value=8.2e-12 Score=110.83 Aligned_cols=133 Identities=21% Similarity=0.222 Sum_probs=96.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..++.++..+. +|+++|+++.+++. .+.++... ...++++++.+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~-----a~~~~~~~-----------------~~~~~v~~~~~ 124 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDR-----AKQAAEAK-----------------GVSDNMQFIHC 124 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHH-----HHHHHHC------------------CCGGGEEEEES
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHH-----HHHHHHhc-----------------CCCcceEEEEc
Confidence 578999999999999998888877 89999999999843 33443211 02245677666
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+. ...++||+|++
T Consensus 125 d~~~~~~--------------------------------------------------------------~~~~~fD~v~~ 142 (285)
T 4htf_A 125 AAQDVAS--------------------------------------------------------------HLETPVDLILF 142 (285)
T ss_dssp CGGGTGG--------------------------------------------------------------GCSSCEEEEEE
T ss_pred CHHHhhh--------------------------------------------------------------hcCCCceEEEE
Confidence 6554320 13468999999
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccc----------------------------ccCcchHHHHHHhhh
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYV----------------------------GFNNAARHLRSLVDE 246 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~f----------------------------g~~~~~~~F~~~~~~ 246 (269)
..++++......+++.+.++|+ |+|++++......- ...-+..++.+.+++
T Consensus 143 ~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 221 (285)
T 4htf_A 143 HAVLEWVADPRSVLQTLWSVLR-PGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEE 221 (285)
T ss_dssp ESCGGGCSCHHHHHHHHHHTEE-EEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHH
T ss_pred CchhhcccCHHHHHHHHHHHcC-CCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999 89999887531100 001135788899999
Q ss_pred cCceeEE
Q 024311 247 EGIFGAH 253 (269)
Q Consensus 247 ~g~~~~~ 253 (269)
.||-..+
T Consensus 222 aGf~v~~ 228 (285)
T 4htf_A 222 AGWQIMG 228 (285)
T ss_dssp TTCEEEE
T ss_pred CCCceee
Confidence 9985433
No 19
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.39 E-value=1.9e-11 Score=108.96 Aligned_cols=152 Identities=21% Similarity=0.261 Sum_probs=102.7
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCC
Q 024311 16 SIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQP 94 (269)
Q Consensus 16 s~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~ 94 (269)
...+++.+............+.+|||+|||+|...+.++.. +. +|+++|+++.+++.+ +.+....
T Consensus 63 ~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a-----~~~~~~~-------- 128 (297)
T 2o57_A 63 SLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRN-----EEYNNQA-------- 128 (297)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHH-----HHHHHHH--------
T ss_pred HHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHH-----HHHHHhc--------
Confidence 34455555554300001236789999999999999877765 66 899999999998543 3333221
Q ss_pred CCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCch
Q 024311 95 ESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSR 174 (269)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~ 174 (269)
...+++++..+|+...+
T Consensus 129 ---------~~~~~~~~~~~d~~~~~------------------------------------------------------ 145 (297)
T 2o57_A 129 ---------GLADNITVKYGSFLEIP------------------------------------------------------ 145 (297)
T ss_dssp ---------TCTTTEEEEECCTTSCS------------------------------------------------------
T ss_pred ---------CCCcceEEEEcCcccCC------------------------------------------------------
Confidence 02245677666655432
Q ss_pred hhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccc----------------cccCcchH
Q 024311 175 AWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNY----------------VGFNNAAR 238 (269)
Q Consensus 175 ~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~----------------fg~~~~~~ 238 (269)
...++||+|++.+++++......+++.+.++|+ |+|++++...... +.......
T Consensus 146 ---------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (297)
T 2o57_A 146 ---------CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLK-PRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLG 215 (297)
T ss_dssp ---------SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHH
T ss_pred ---------CCCCCEeEEEecchhhhcCCHHHHHHHHHHHcC-CCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHH
Confidence 134589999999999999999999999999999 8999888743211 00112456
Q ss_pred HHHHHhhhcCceeEEE
Q 024311 239 HLRSLVDEEGIFGAHL 254 (269)
Q Consensus 239 ~F~~~~~~~g~~~~~~ 254 (269)
.+.+.+++.||-..++
T Consensus 216 ~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 216 LYRSLAKECGLVTLRT 231 (297)
T ss_dssp HHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHCCCeEEEE
Confidence 7778899999754443
No 20
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.39 E-value=8.6e-12 Score=107.26 Aligned_cols=103 Identities=22% Similarity=0.337 Sum_probs=78.7
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.++.+|||+|||+|..+..++..+..+|+++|+++.+++. .+.+.. ..++++..
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~-----a~~~~~---------------------~~~~~~~~ 95 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLAR-----ARAAGP---------------------DTGITYER 95 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHH-----HHHTSC---------------------SSSEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHH-----HHHhcc---------------------cCCceEEE
Confidence 3678999999999999988888877689999999998843 222210 12355554
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|....+ ...++||+|+
T Consensus 96 ~d~~~~~---------------------------------------------------------------~~~~~fD~v~ 112 (243)
T 3bkw_A 96 ADLDKLH---------------------------------------------------------------LPQDSFDLAY 112 (243)
T ss_dssp CCGGGCC---------------------------------------------------------------CCTTCEEEEE
T ss_pred cChhhcc---------------------------------------------------------------CCCCCceEEE
Confidence 4433211 1345899999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
++.++++......+++.+.++|+ |+|++++..
T Consensus 113 ~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~ 144 (243)
T 3bkw_A 113 SSLALHYVEDVARLFRTVHQALS-PGGHFVFST 144 (243)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EeccccccchHHHHHHHHHHhcC-cCcEEEEEe
Confidence 99999999999999999999999 899998875
No 21
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.38 E-value=1.1e-11 Score=111.94 Aligned_cols=133 Identities=15% Similarity=0.101 Sum_probs=96.3
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
..+.+|||+|||+|..++.++.. ++ +|++.|+++.+++. .+.|...+ .+..++++.
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~-----a~~~~~~~-----------------~~~~~v~~~ 172 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADF-----GNRRAREL-----------------RIDDHVRSR 172 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHH-----HHHHHHHT-----------------TCTTTEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHH-----HHHHHHHc-----------------CCCCceEEE
Confidence 46789999999999999887776 65 89999999999843 44444332 122457777
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+.+ ...++||+|
T Consensus 173 ~~d~~~~~---------------------------------------------------------------~~~~~fD~V 189 (312)
T 3vc1_A 173 VCNMLDTP---------------------------------------------------------------FDKGAVTAS 189 (312)
T ss_dssp ECCTTSCC---------------------------------------------------------------CCTTCEEEE
T ss_pred ECChhcCC---------------------------------------------------------------CCCCCEeEE
Confidence 77655421 134689999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccc-----------------ccCcchHHHHHHhhhcCceeEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYV-----------------GFNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~f-----------------g~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
++.+++++.+ ...+++.+.++|+ |+|++++......- .......++.+.+++.||-..++
T Consensus 190 ~~~~~l~~~~-~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 190 WNNESTMYVD-LHDLFSEHSRFLK-VGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp EEESCGGGSC-HHHHHHHHHHHEE-EEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred EECCchhhCC-HHHHHHHHHHHcC-CCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 9999999984 9999999999999 89998887522110 01124677888999999754444
No 22
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.38 E-value=1.5e-11 Score=104.86 Aligned_cols=137 Identities=18% Similarity=0.256 Sum_probs=94.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..++.++..++ +|+++|+++.+++. .+.|.... .+. .....++.+..+
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~-----a~~~~~~~----------~~~---~~~~~~~~~~~~ 90 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRL-----AETAARSP----------GLN---QKTGGKAEFKVE 90 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHH-----HHHHTTCC----------SCC---SSSSCEEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHH-----HHHHHHhc----------CCc---cccCcceEEEEe
Confidence 678999999999999998888877 89999999998843 33333110 000 001124555555
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ...++||+|++
T Consensus 91 d~~~~~---------------------------------------------------------------~~~~~~D~v~~ 107 (235)
T 3sm3_A 91 NASSLS---------------------------------------------------------------FHDSSFDFAVM 107 (235)
T ss_dssp CTTSCC---------------------------------------------------------------SCTTCEEEEEE
T ss_pred cccccC---------------------------------------------------------------CCCCceeEEEE
Confidence 433221 13468999999
Q ss_pred eccccccCCHH---HHHHHHHHhcCCCCeEEEEEEcccc-----------------------------------cccCcc
Q 024311 195 TEIPYSVTSLK---KLYLLIKKCLRPPYGVVYLATKKNY-----------------------------------VGFNNA 236 (269)
Q Consensus 195 sD~iY~~~~~~---~L~~~l~~~L~~p~g~~~va~k~~~-----------------------------------fg~~~~ 236 (269)
+.++++..... .+++.+.++|+ |+|++++...... ....-.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLK-PGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFT 186 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEE-EEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBC
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcC-CCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCC
Confidence 99999988877 88999999998 8999988732110 000125
Q ss_pred hHHHHHHhhhcCceeEEE
Q 024311 237 ARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 237 ~~~F~~~~~~~g~~~~~~ 254 (269)
..++.+.+++.||-..++
T Consensus 187 ~~~l~~ll~~aGf~~~~~ 204 (235)
T 3sm3_A 187 EKELVFLLTDCRFEIDYF 204 (235)
T ss_dssp HHHHHHHHHTTTEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEE
Confidence 788999999999854444
No 23
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.37 E-value=3.7e-11 Score=105.06 Aligned_cols=130 Identities=15% Similarity=0.125 Sum_probs=93.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+.+|||+|||+|.....++..++ +|++.|.++.+++.+ +.+.... ..+++.+..+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a-----~~~~~~~------------------~~~~v~~~~~ 92 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVA-----RAFIEGN------------------GHQQVEYVQG 92 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHH-----HHHHHHT------------------TCCSEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHH-----HHHHHhc------------------CCCceEEEEe
Confidence 678999999999999988888876 999999999998543 3333221 0124666666
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ..+++||+|++
T Consensus 93 d~~~l~---------------------------------------------------------------~~~~~fD~V~~ 109 (260)
T 1vl5_A 93 DAEQMP---------------------------------------------------------------FTDERFHIVTC 109 (260)
T ss_dssp CC-CCC---------------------------------------------------------------SCTTCEEEEEE
T ss_pred cHHhCC---------------------------------------------------------------CCCCCEEEEEE
Confidence 654321 13468999999
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccc-------------------cccCcchHHHHHHhhhcCceeE
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNY-------------------VGFNNAARHLRSLVDEEGIFGA 252 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~-------------------fg~~~~~~~F~~~~~~~g~~~~ 252 (269)
+.++++..+.+.+++.+.++|+ |+|++++...... ....-...++.+.+++.||-..
T Consensus 110 ~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 185 (260)
T 1vl5_A 110 RIAAHHFPNPASFVSEAYRVLK-KGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELE 185 (260)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEE
T ss_pred hhhhHhcCCHHHHHHHHHHHcC-CCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEE
Confidence 9999999999999999999999 8999888632110 0011245678888999997433
No 24
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.37 E-value=9.3e-12 Score=106.80 Aligned_cols=128 Identities=20% Similarity=0.172 Sum_probs=93.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.++.+|||+|||+|.....++..++ +|+++|+++.+++.+ +.+. ..++++..
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a-----~~~~----------------------~~~v~~~~ 92 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHA-----QGRL----------------------KDGITYIH 92 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHH-----HHHS----------------------CSCEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHH-----HHhh----------------------hCCeEEEE
Confidence 4678999999999999998888877 899999999988432 2211 01455554
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+. ..+++||+|+
T Consensus 93 ~d~~~~----------------------------------------------------------------~~~~~fD~v~ 108 (250)
T 2p7i_A 93 SRFEDA----------------------------------------------------------------QLPRRYDNIV 108 (250)
T ss_dssp SCGGGC----------------------------------------------------------------CCSSCEEEEE
T ss_pred ccHHHc----------------------------------------------------------------CcCCcccEEE
Confidence 443321 1245899999
Q ss_pred EeccccccCCHHHHHHHHH-HhcCCCCeEEEEEEccccc-------------------------c--cCcchHHHHHHhh
Q 024311 194 LTEIPYSVTSLKKLYLLIK-KCLRPPYGVVYLATKKNYV-------------------------G--FNNAARHLRSLVD 245 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~-~~L~~p~g~~~va~k~~~f-------------------------g--~~~~~~~F~~~~~ 245 (269)
+..++++......+++.+. ++|+ |+|++++....... + ..-+..++.+.++
T Consensus 109 ~~~~l~~~~~~~~~l~~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 187 (250)
T 2p7i_A 109 LTHVLEHIDDPVALLKRINDDWLA-EGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDAS 187 (250)
T ss_dssp EESCGGGCSSHHHHHHHHHHTTEE-EEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHH
T ss_pred EhhHHHhhcCHHHHHHHHHHHhcC-CCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHH
Confidence 9999999999999999999 9999 89999987632110 0 0114678889999
Q ss_pred hcCceeEEE
Q 024311 246 EEGIFGAHL 254 (269)
Q Consensus 246 ~~g~~~~~~ 254 (269)
+.||-..++
T Consensus 188 ~~Gf~~~~~ 196 (250)
T 2p7i_A 188 RAGLQVTYR 196 (250)
T ss_dssp HTTCEEEEE
T ss_pred HCCCeEEEE
Confidence 999854443
No 25
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.36 E-value=1.7e-11 Score=105.19 Aligned_cols=129 Identities=20% Similarity=0.160 Sum_probs=90.1
Q ss_pred CCCCEEEEEcCC-CCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 34 FRGKRVLELSCG-YGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 34 ~~~~~VLELGcG-tGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
-++.+|||+||| +|..++.++.....+|+++|+++.+++ ..+.|+..+. .++++.
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~-----~a~~~~~~~~-------------------~~v~~~ 109 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFE-----YARRNIERNN-------------------SNVRLV 109 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHH-----HHHHHHHHTT-------------------CCCEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHH-----HHHHHHHHhC-------------------CCcEEE
Confidence 368899999999 999999888773348999999999984 4455554431 145666
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|+..... ...++||+|
T Consensus 110 ~~d~~~~~~--------------------------------------------------------------~~~~~fD~I 127 (230)
T 3evz_A 110 KSNGGIIKG--------------------------------------------------------------VVEGTFDVI 127 (230)
T ss_dssp ECSSCSSTT--------------------------------------------------------------TCCSCEEEE
T ss_pred eCCchhhhh--------------------------------------------------------------cccCceeEE
Confidence 666543210 123689999
Q ss_pred EEeccccccCC--------------------HHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeE
Q 024311 193 LLTEIPYSVTS--------------------LKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGA 252 (269)
Q Consensus 193 lasD~iY~~~~--------------------~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~ 252 (269)
++ +..|.+.. +..+++.+.++|+ |+|++++.....+ .....+.+.+++.|+ ..
T Consensus 128 ~~-npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~----~~~~~~~~~l~~~g~-~~ 200 (230)
T 3evz_A 128 FS-APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLN-PGGKVALYLPDKE----KLLNVIKERGIKLGY-SV 200 (230)
T ss_dssp EE-CCCCC---------------CCSSSCHHHHHHHHHHGGGEE-EEEEEEEEEESCH----HHHHHHHHHHHHTTC-EE
T ss_pred EE-CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhC-CCeEEEEEecccH----hHHHHHHHHHHHcCC-ce
Confidence 96 55554322 3778888889998 8999988755432 246789999999997 44
Q ss_pred EEE
Q 024311 253 HLI 255 (269)
Q Consensus 253 ~~~ 255 (269)
+.+
T Consensus 201 ~~~ 203 (230)
T 3evz_A 201 KDI 203 (230)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 26
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.36 E-value=1.1e-11 Score=104.88 Aligned_cols=125 Identities=23% Similarity=0.266 Sum_probs=90.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..+..++..+. +|+++|+++.+++. .+.+. + +.+..+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~-----a~~~~--~----------------------~~~~~~ 92 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAE-----ASRRL--G----------------------RPVRTM 92 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHH-----HHHHH--T----------------------SCCEEC
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHH-----HHHhc--C----------------------CceEEe
Confidence 578999999999999998888877 89999999998844 33332 1 111112
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|.... ...++||+|++
T Consensus 93 d~~~~----------------------------------------------------------------~~~~~fD~v~~ 108 (211)
T 3e23_A 93 LFHQL----------------------------------------------------------------DAIDAYDAVWA 108 (211)
T ss_dssp CGGGC----------------------------------------------------------------CCCSCEEEEEE
T ss_pred eeccC----------------------------------------------------------------CCCCcEEEEEe
Confidence 21110 13458999999
Q ss_pred eccccccC--CHHHHHHHHHHhcCCCCeEEEEEEcccccc---------cCcchHHHHHHhhhcC-ceeEEE
Q 024311 195 TEIPYSVT--SLKKLYLLIKKCLRPPYGVVYLATKKNYVG---------FNNAARHLRSLVDEEG-IFGAHL 254 (269)
Q Consensus 195 sD~iY~~~--~~~~L~~~l~~~L~~p~g~~~va~k~~~fg---------~~~~~~~F~~~~~~~g-~~~~~~ 254 (269)
+.++++.. ....+++.+.++|+ |+|++++........ ..-...++.+.+++.| |-..++
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 109 HACLLHVPRDELADVLKLIWRALK-PGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred cCchhhcCHHHHHHHHHHHHHhcC-CCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 99999887 77889999999999 899999885432100 0125788999999999 854444
No 27
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.35 E-value=2.7e-11 Score=106.69 Aligned_cols=135 Identities=22% Similarity=0.352 Sum_probs=95.0
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
.-++.+|||+|||+|.....++..+ ..+|+++|+++.+++. .+.|...+. .+++.+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~-----a~~~~~~~~------------------~~~~~~ 91 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEK-----ARENTEKNG------------------IKNVKF 91 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHH-----HHHHHHHTT------------------CCSEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHH-----HHHHHHHcC------------------CCCcEE
Confidence 3478899999999999998877764 3589999999999843 344443210 124566
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
...|....+ ...++||+
T Consensus 92 ~~~d~~~~~---------------------------------------------------------------~~~~~fD~ 108 (276)
T 3mgg_A 92 LQANIFSLP---------------------------------------------------------------FEDSSFDH 108 (276)
T ss_dssp EECCGGGCC---------------------------------------------------------------SCTTCEEE
T ss_pred EEcccccCC---------------------------------------------------------------CCCCCeeE
Confidence 555544321 13468999
Q ss_pred EEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccc---cc----------------------ccCcchHHHHHHhhh
Q 024311 192 ILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKN---YV----------------------GFNNAARHLRSLVDE 246 (269)
Q Consensus 192 IlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~---~f----------------------g~~~~~~~F~~~~~~ 246 (269)
|+++.++++....+.+++.+.++|+ |+|++++..... ++ +.......+...+++
T Consensus 109 v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 187 (276)
T 3mgg_A 109 IFVCFVLEHLQSPEEALKSLKKVLK-PGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQE 187 (276)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHH
T ss_pred EEEechhhhcCCHHHHHHHHHHHcC-CCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHH
Confidence 9999999999999999999999999 899988864211 00 001123567778999
Q ss_pred cCceeEEE
Q 024311 247 EGIFGAHL 254 (269)
Q Consensus 247 ~g~~~~~~ 254 (269)
.||-..++
T Consensus 188 aGf~~v~~ 195 (276)
T 3mgg_A 188 SGFEKIRV 195 (276)
T ss_dssp TTCEEEEE
T ss_pred CCCCeEEE
Confidence 99854444
No 28
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.35 E-value=5.3e-12 Score=109.47 Aligned_cols=132 Identities=17% Similarity=0.222 Sum_probs=94.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
..+.+|||+|||+|..+..++..+..+|++.|+++.+++. .+.+... ..++++..
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~-----a~~~~~~--------------------~~~~~~~~ 146 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEE-----AKRELAG--------------------MPVGKFIL 146 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHH-----HHHHTTT--------------------SSEEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHH-----HHHHhcc--------------------CCceEEEE
Confidence 3678999999999999988777666689999999998843 2333210 03566666
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|+...+ ...++||+|+
T Consensus 147 ~d~~~~~---------------------------------------------------------------~~~~~fD~v~ 163 (254)
T 1xtp_A 147 ASMETAT---------------------------------------------------------------LPPNTYDLIV 163 (254)
T ss_dssp SCGGGCC---------------------------------------------------------------CCSSCEEEEE
T ss_pred ccHHHCC---------------------------------------------------------------CCCCCeEEEE
Confidence 6544321 1345899999
Q ss_pred Eecccccc--CCHHHHHHHHHHhcCCCCeEEEEEEcccc-----cc-----cCcchHHHHHHhhhcCceeEEE
Q 024311 194 LTEIPYSV--TSLKKLYLLIKKCLRPPYGVVYLATKKNY-----VG-----FNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 194 asD~iY~~--~~~~~L~~~l~~~L~~p~g~~~va~k~~~-----fg-----~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
++.++++. .....+++.+.++|+ |+|++++...... .. ......++.+.+++.||-..++
T Consensus 164 ~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 164 IQWTAIYLTDADFVKFFKHCQQALT-PNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcC-CCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 99999988 457889999999999 8999988763110 00 0124578899999999855544
No 29
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.35 E-value=4.9e-11 Score=100.71 Aligned_cols=125 Identities=12% Similarity=0.089 Sum_probs=91.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
..+.+|||+|||+|..++.++..+ ..+|+++|+++++++. .+.|+..+. . .++++.
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~-----a~~~~~~~~-----------------~-~~v~~~ 95 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGF-----IRDNLKKFV-----------------A-RNVTLV 95 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHH-----HHHHHHHHT-----------------C-TTEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHH-----HHHHHHHhC-----------------C-CcEEEE
Confidence 367899999999999999888776 3599999999999844 444543321 1 245665
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+.. ....+||+|
T Consensus 96 ~~d~~~~~---------------------------------------------------------------~~~~~~D~i 112 (204)
T 3e05_A 96 EAFAPEGL---------------------------------------------------------------DDLPDPDRV 112 (204)
T ss_dssp ECCTTTTC---------------------------------------------------------------TTSCCCSEE
T ss_pred eCChhhhh---------------------------------------------------------------hcCCCCCEE
Confidence 55543210 022479999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
+.....+ ..+.+++.+.++|+ |+|++++..... .....+.+.+++.|+ ..++
T Consensus 113 ~~~~~~~---~~~~~l~~~~~~Lk-pgG~l~~~~~~~-----~~~~~~~~~l~~~g~-~~~~ 164 (204)
T 3e05_A 113 FIGGSGG---MLEEIIDAVDRRLK-SEGVIVLNAVTL-----DTLTKAVEFLEDHGY-MVEV 164 (204)
T ss_dssp EESCCTT---CHHHHHHHHHHHCC-TTCEEEEEECBH-----HHHHHHHHHHHHTTC-EEEE
T ss_pred EECCCCc---CHHHHHHHHHHhcC-CCeEEEEEeccc-----ccHHHHHHHHHHCCC-ceeE
Confidence 9977665 78899999999998 899999876543 357889999999997 4433
No 30
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.35 E-value=6.5e-11 Score=100.53 Aligned_cols=122 Identities=20% Similarity=0.134 Sum_probs=88.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..+..++..+. +|+++|+++.+++. .+.+.. .++++..+
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~-----a~~~~~----------------------~~~~~~~~ 96 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMI-----AKEKLP----------------------KEFSITEG 96 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHH-----HHHHSC----------------------TTCCEESC
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHH-----HHHhCC----------------------CceEEEeC
Confidence 578999999999999988888876 89999999998843 222210 13445445
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ .. ++||+|++
T Consensus 97 d~~~~~---------------------------------------------------------------~~-~~fD~v~~ 112 (220)
T 3hnr_A 97 DFLSFE---------------------------------------------------------------VP-TSIDTIVS 112 (220)
T ss_dssp CSSSCC---------------------------------------------------------------CC-SCCSEEEE
T ss_pred ChhhcC---------------------------------------------------------------CC-CCeEEEEE
Confidence 443321 12 68999999
Q ss_pred eccccccCCHHH--HHHHHHHhcCCCCeEEEEEEccccc--------------c-----------cCcchHHHHHHhhhc
Q 024311 195 TEIPYSVTSLKK--LYLLIKKCLRPPYGVVYLATKKNYV--------------G-----------FNNAARHLRSLVDEE 247 (269)
Q Consensus 195 sD~iY~~~~~~~--L~~~l~~~L~~p~g~~~va~k~~~f--------------g-----------~~~~~~~F~~~~~~~ 247 (269)
..++++...... +++.+.++|+ |+|.+++......- | .-.+..++.+.+++.
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 191 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLN-KGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENN 191 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSC-TTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHT
T ss_pred CcchhcCChHHHHHHHHHHHHhcC-CCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHC
Confidence 999999888776 9999999998 89999988422100 0 001457888999999
Q ss_pred Cc
Q 024311 248 GI 249 (269)
Q Consensus 248 g~ 249 (269)
||
T Consensus 192 Gf 193 (220)
T 3hnr_A 192 GF 193 (220)
T ss_dssp TE
T ss_pred CC
Confidence 97
No 31
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.35 E-value=1.8e-11 Score=103.32 Aligned_cols=138 Identities=15% Similarity=0.139 Sum_probs=96.6
Q ss_pred eccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhcc
Q 024311 13 WESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSR 92 (269)
Q Consensus 13 W~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~ 92 (269)
++....+.+++.... .++.+|||+|||+|..++.++..+..+|+++|+++.+++ ..+.|+..+.
T Consensus 44 ~~~~~~~~~~l~~~~------~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~-----~a~~~~~~~~----- 107 (205)
T 3grz_A 44 HQTTQLAMLGIERAM------VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMT-----AAEENAALNG----- 107 (205)
T ss_dssp HHHHHHHHHHHHHHC------SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHH-----HHHHHHHHTT-----
T ss_pred CccHHHHHHHHHHhc------cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHH-----HHHHHHHHcC-----
Confidence 455666666766542 257899999999999999888888779999999999984 4455553321
Q ss_pred CCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccC
Q 024311 93 QPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSG 172 (269)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~g 172 (269)
. .++++..+|+...
T Consensus 108 ------------~-~~v~~~~~d~~~~----------------------------------------------------- 121 (205)
T 3grz_A 108 ------------I-YDIALQKTSLLAD----------------------------------------------------- 121 (205)
T ss_dssp ------------C-CCCEEEESSTTTT-----------------------------------------------------
T ss_pred ------------C-CceEEEecccccc-----------------------------------------------------
Confidence 1 1255555554321
Q ss_pred chhhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeE
Q 024311 173 SRAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGA 252 (269)
Q Consensus 173 s~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~ 252 (269)
..++||+|++.-++. .+..+++.+.++|+ |+|++++..-.. .....+.+.+++.|+-..
T Consensus 122 ------------~~~~fD~i~~~~~~~---~~~~~l~~~~~~L~-~gG~l~~~~~~~-----~~~~~~~~~~~~~Gf~~~ 180 (205)
T 3grz_A 122 ------------VDGKFDLIVANILAE---ILLDLIPQLDSHLN-EDGQVIFSGIDY-----LQLPKIEQALAENSFQID 180 (205)
T ss_dssp ------------CCSCEEEEEEESCHH---HHHHHGGGSGGGEE-EEEEEEEEEEEG-----GGHHHHHHHHHHTTEEEE
T ss_pred ------------CCCCceEEEECCcHH---HHHHHHHHHHHhcC-CCCEEEEEecCc-----ccHHHHHHHHHHcCCceE
Confidence 235899999975543 25677888888898 899998864332 257789999999997433
Q ss_pred E
Q 024311 253 H 253 (269)
Q Consensus 253 ~ 253 (269)
+
T Consensus 181 ~ 181 (205)
T 3grz_A 181 L 181 (205)
T ss_dssp E
T ss_pred E
Confidence 3
No 32
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.35 E-value=3.5e-11 Score=99.28 Aligned_cols=137 Identities=17% Similarity=0.276 Sum_probs=93.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCC-eeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAP-SVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~ 113 (269)
++.+|||+|||+|..++.++..+ .+|+++|+++.+++. .+.|...+. ... ++++..
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~-~~v~~~D~~~~~~~~-----a~~~~~~~~-----------------~~~~~~~~~~ 108 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEV-KSTTMADINRRAIKL-----AKENIKLNN-----------------LDNYDIRVVH 108 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGS-SEEEEEESCHHHHHH-----HHHHHHHTT-----------------CTTSCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC-CeEEEEECCHHHHHH-----HHHHHHHcC-----------------CCccceEEEE
Confidence 67899999999999999888874 499999999999843 444443220 111 255655
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|+... ....+||+|+
T Consensus 109 ~d~~~~----------------------------------------------------------------~~~~~~D~v~ 124 (194)
T 1dus_A 109 SDLYEN----------------------------------------------------------------VKDRKYNKII 124 (194)
T ss_dssp CSTTTT----------------------------------------------------------------CTTSCEEEEE
T ss_pred Cchhcc----------------------------------------------------------------cccCCceEEE
Confidence 554321 1235899999
Q ss_pred Eeccccc-cCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEEEeeecCcceEE
Q 024311 194 LTEIPYS-VTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHLIKEMTDRDIWK 265 (269)
Q Consensus 194 asD~iY~-~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~~~~~~~~~i~~ 265 (269)
+..+++. ......+++.+.++|+ |+|++++..... ....++.+.+++. +...+++......-+|.
T Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~-----~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 190 (194)
T 1dus_A 125 TNPPIRAGKEVLHRIIEEGKELLK-DNGEIWVVIQTK-----QGAKSLAKYMKDV-FGNVETVTIKGGYRVLK 190 (194)
T ss_dssp ECCCSTTCHHHHHHHHHHHHHHEE-EEEEEEEEEEST-----HHHHHHHHHHHHH-HSCCEEEEEETTEEEEE
T ss_pred ECCCcccchhHHHHHHHHHHHHcC-CCCEEEEEECCC-----CChHHHHHHHHHH-hcceEEEecCCcEEEEE
Confidence 8665554 3566788999999998 899999887553 2455677888776 54556655554444444
No 33
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.35 E-value=1.5e-11 Score=106.49 Aligned_cols=133 Identities=15% Similarity=0.181 Sum_probs=93.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..++.++..+..+|+++|+++.+++. .+.|..... ..++++..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~-----a~~~~~~~~------------------~~~~~~~~~ 135 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQ-----AKTYLGEEG------------------KRVRNYFCC 135 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHH-----HHHHTGGGG------------------GGEEEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHH-----HHHHhhhcC------------------CceEEEEEc
Confidence 578999999999999988777766699999999999843 333332110 124555555
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|+...+ ...++||+|++
T Consensus 136 d~~~~~---------------------------------------------------------------~~~~~fD~v~~ 152 (241)
T 2ex4_A 136 GLQDFT---------------------------------------------------------------PEPDSYDVIWI 152 (241)
T ss_dssp CGGGCC---------------------------------------------------------------CCSSCEEEEEE
T ss_pred ChhhcC---------------------------------------------------------------CCCCCEEEEEE
Confidence 543221 12358999999
Q ss_pred eccccccCC--HHHHHHHHHHhcCCCCeEEEEEEcccc----cc-----cCcchHHHHHHhhhcCceeEEE
Q 024311 195 TEIPYSVTS--LKKLYLLIKKCLRPPYGVVYLATKKNY----VG-----FNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 195 sD~iY~~~~--~~~L~~~l~~~L~~p~g~~~va~k~~~----fg-----~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
..++++... ...+++.+.++|+ |+|++++...... |. ......++.+.+++.||-..+.
T Consensus 153 ~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 153 QWVIGHLTDQHLAEFLRRCKGSLR-PNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcC-CCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 999998766 5589999999999 8999988643211 00 0115789999999999854444
No 34
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.34 E-value=5.3e-11 Score=101.23 Aligned_cols=103 Identities=21% Similarity=0.364 Sum_probs=77.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+.+|||+|||+|..++.++..++ +|+++|+++++++. .+.|...+ ..++++..+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~-----a~~~~~~~-------------------~~~~~~~~~ 92 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRK-----AREYAKSR-------------------ESNVEFIVG 92 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHH-----HHHHHHHT-------------------TCCCEEEEC
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHH-----HHHHHHhc-------------------CCCceEEEC
Confidence 378999999999999998888887 99999999999843 44444322 124556555
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ...++||+|++
T Consensus 93 d~~~~~---------------------------------------------------------------~~~~~~D~v~~ 109 (227)
T 1ve3_A 93 DARKLS---------------------------------------------------------------FEDKTFDYVIF 109 (227)
T ss_dssp CTTSCC---------------------------------------------------------------SCTTCEEEEEE
T ss_pred chhcCC---------------------------------------------------------------CCCCcEEEEEE
Confidence 544321 13458999999
Q ss_pred ecc--ccccCCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 195 TEI--PYSVTSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 195 sD~--iY~~~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
.++ .++......+++.+.++|+ |+|++++..
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~ 142 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLK-PSGKFIMYF 142 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred cCchHhCCHHHHHHHHHHHHHHcC-CCcEEEEEe
Confidence 999 6666677889999999999 899888764
No 35
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.34 E-value=4.8e-11 Score=106.28 Aligned_cols=106 Identities=14% Similarity=0.209 Sum_probs=81.3
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
.++.+|||+|||+|..++.++.. + ..+|+++|+++.+++. .+.+... ...++++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~-----a~~~~~~-------------------~~~~v~~ 76 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAE-----ARELFRL-------------------LPYDSEF 76 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHH-----HHHHHHS-------------------SSSEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHH-----HHHHHHh-------------------cCCceEE
Confidence 46889999999999999888765 2 2489999999998843 3444321 1136777
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
..+|..+.+ ..++||+
T Consensus 77 ~~~d~~~~~----------------------------------------------------------------~~~~fD~ 92 (284)
T 3gu3_A 77 LEGDATEIE----------------------------------------------------------------LNDKYDI 92 (284)
T ss_dssp EESCTTTCC----------------------------------------------------------------CSSCEEE
T ss_pred EEcchhhcC----------------------------------------------------------------cCCCeeE
Confidence 666655321 1348999
Q ss_pred EEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcc
Q 024311 192 ILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKK 228 (269)
Q Consensus 192 IlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~ 228 (269)
|++..++++....+.+++.+.++|+ |+|.+++....
T Consensus 93 v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 128 (284)
T 3gu3_A 93 AICHAFLLHMTTPETMLQKMIHSVK-KGGKIICFEPH 128 (284)
T ss_dssp EEEESCGGGCSSHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred EEECChhhcCCCHHHHHHHHHHHcC-CCCEEEEEecc
Confidence 9999999999999999999999998 89999887544
No 36
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.34 E-value=1.2e-11 Score=101.22 Aligned_cols=129 Identities=11% Similarity=0.090 Sum_probs=91.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..+..++..+. +|++.|+++.+++.+ +.+. +++++..+
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a-----~~~~-----------------------~~v~~~~~ 67 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEV-----KEKF-----------------------DSVITLSD 67 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHH-----HHHC-----------------------TTSEEESS
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHH-----HHhC-----------------------CCcEEEeC
Confidence 577999999999999998888776 999999999988432 2220 23444444
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
| .+ ...++||+|++
T Consensus 68 d---~~---------------------------------------------------------------~~~~~~D~v~~ 81 (170)
T 3i9f_A 68 P---KE---------------------------------------------------------------IPDNSVDFILF 81 (170)
T ss_dssp G---GG---------------------------------------------------------------SCTTCEEEEEE
T ss_pred C---CC---------------------------------------------------------------CCCCceEEEEE
Confidence 3 10 13458999999
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc-------CcchHHHHHHhhhcCceeEEEEeeecCcc
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF-------NNAARHLRSLVDEEGIFGAHLIKEMTDRD 262 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~-------~~~~~~F~~~~~~~g~~~~~~~~~~~~~~ 262 (269)
++++++......+++.+.++|+ |+|++++......... .-...++.+.++ ||-..+. .+.....
T Consensus 82 ~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~-~~~~~~~ 152 (170)
T 3i9f_A 82 ANSFHDMDDKQHVISEVKRILK-DDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKR-FNPTPYH 152 (170)
T ss_dssp ESCSTTCSCHHHHHHHHHHHEE-EEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEE-ECSSTTE
T ss_pred ccchhcccCHHHHHHHHHHhcC-CCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEc-cCCCCce
Confidence 9999999999999999999999 8999988743221110 113567888888 8644443 4444333
No 37
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.33 E-value=9.6e-11 Score=103.86 Aligned_cols=146 Identities=16% Similarity=0.160 Sum_probs=98.4
Q ss_pred cHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHH-HcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccC
Q 024311 15 SSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFAC-LKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQ 93 (269)
Q Consensus 15 as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa-~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~ 93 (269)
+...+.+.+.+.. ....+.+|||+|||+|...+.++ ..|. +|+++|+++.+++. .+.+....
T Consensus 48 a~~~~~~~~~~~~----~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~-----a~~~~~~~------- 110 (287)
T 1kpg_A 48 AQIAKIDLALGKL----GLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANH-----VQQLVANS------- 110 (287)
T ss_dssp HHHHHHHHHHTTT----TCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHH-----HHHHHHTC-------
T ss_pred HHHHHHHHHHHHc----CCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHH-----HHHHHHhc-------
Confidence 3344555555542 13467899999999999998777 5676 99999999998843 33333211
Q ss_pred CCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCc
Q 024311 94 PESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGS 173 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs 173 (269)
...+++++..+|+..
T Consensus 111 ----------~~~~~~~~~~~d~~~------------------------------------------------------- 125 (287)
T 1kpg_A 111 ----------ENLRSKRVLLAGWEQ------------------------------------------------------- 125 (287)
T ss_dssp ----------CCCSCEEEEESCGGG-------------------------------------------------------
T ss_pred ----------CCCCCeEEEECChhh-------------------------------------------------------
Confidence 012345554444321
Q ss_pred hhhhhhcccccCCCCccEEEEecccccc--CCHHHHHHHHHHhcCCCCeEEEEEEccc----------------------
Q 024311 174 RAWERASEADQGEGGYDVILLTEIPYSV--TSLKKLYLLIKKCLRPPYGVVYLATKKN---------------------- 229 (269)
Q Consensus 174 ~~W~~~~~~~~~~~~fDlIlasD~iY~~--~~~~~L~~~l~~~L~~p~g~~~va~k~~---------------------- 229 (269)
.+++||+|++.+++++. .....+++.+.++|+ |+|++++.....
T Consensus 126 -----------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (287)
T 1kpg_A 126 -----------FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLP-ADGVMLLHTITGLHPKEIHERGLPMSFTFARFLK 193 (287)
T ss_dssp -----------CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSC-TTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHH
T ss_pred -----------CCCCeeEEEEeCchhhcChHHHHHHHHHHHHhcC-CCCEEEEEEecCCCccccccccccccccccchhh
Confidence 11589999999999988 788999999999999 899988864221
Q ss_pred -----ccc--cCcchHHHHHHhhhcCceeEEE
Q 024311 230 -----YVG--FNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 230 -----~fg--~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
.|. .-.+..++.+.+++.||-..++
T Consensus 194 ~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 225 (287)
T 1kpg_A 194 FIVTEIFPGGRLPSIPMVQECASANGFTVTRV 225 (287)
T ss_dssp HHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEE
T ss_pred hHHheeCCCCCCCCHHHHHHHHHhCCcEEEEE
Confidence 010 0115678888899999854444
No 38
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.33 E-value=2.2e-11 Score=106.70 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=73.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..+..++..++ +|+++|+++.+++.+ +.+. +++.+..+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a-----~~~~-----------------------~~~~~~~~ 100 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIA-----RRRN-----------------------PDAVLHHG 100 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHH-----HHHC-----------------------TTSEEEEC
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHH-----HhhC-----------------------CCCEEEEC
Confidence 568999999999999999888876 899999999988432 2221 13455555
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ..++||+|++
T Consensus 101 d~~~~~----------------------------------------------------------------~~~~fD~v~~ 116 (263)
T 3pfg_A 101 DMRDFS----------------------------------------------------------------LGRRFSAVTC 116 (263)
T ss_dssp CTTTCC----------------------------------------------------------------CSCCEEEEEE
T ss_pred ChHHCC----------------------------------------------------------------ccCCcCEEEE
Confidence 544321 2458999999
Q ss_pred ec-ccccc---CCHHHHHHHHHHhcCCCCeEEEEE
Q 024311 195 TE-IPYSV---TSLKKLYLLIKKCLRPPYGVVYLA 225 (269)
Q Consensus 195 sD-~iY~~---~~~~~L~~~l~~~L~~p~g~~~va 225 (269)
.. ++++. .....+++.+.++|+ |+|++++.
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~i~ 150 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVL-PDGVVVVE 150 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEE-EEEEEEEC
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcC-CCcEEEEE
Confidence 97 88776 356678889999998 89999885
No 39
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.33 E-value=6.9e-12 Score=106.69 Aligned_cols=108 Identities=13% Similarity=0.206 Sum_probs=78.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||||||+|..++.++..++.+|++.|+++.+++. .+.|+..+. . .+++++.+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~-----a~~~~~~~~-----------------~-~~v~~~~~ 110 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQ-----LIKNLATLK-----------------A-GNARVVNS 110 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHH-----HHHHHHHTT-----------------C-CSEEEECS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHH-----HHHHHHHcC-----------------C-CcEEEEEC
Confidence 578999999999999998777787799999999999844 455554321 1 24566555
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|..+.. .....+||+|++
T Consensus 111 D~~~~~--------------------------------------------------------------~~~~~~fD~V~~ 128 (202)
T 2fpo_A 111 NAMSFL--------------------------------------------------------------AQKGTPHNIVFV 128 (202)
T ss_dssp CHHHHH--------------------------------------------------------------SSCCCCEEEEEE
T ss_pred CHHHHH--------------------------------------------------------------hhcCCCCCEEEE
Confidence 533210 012358999997
Q ss_pred eccccccCCHHHHHHHHHH--hcCCCCeEEEEEEccc
Q 024311 195 TEIPYSVTSLKKLYLLIKK--CLRPPYGVVYLATKKN 229 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~--~L~~p~g~~~va~k~~ 229 (269)
|..|.....+.+++.+.+ +|+ |+|++++.+...
T Consensus 129 -~~p~~~~~~~~~l~~l~~~~~L~-pgG~l~i~~~~~ 163 (202)
T 2fpo_A 129 -DPPFRRGLLEETINLLEDNGWLA-DEALIYVESEVE 163 (202)
T ss_dssp -CCSSSTTTHHHHHHHHHHTTCEE-EEEEEEEEEEGG
T ss_pred -CCCCCCCcHHHHHHHHHhcCccC-CCcEEEEEECCC
Confidence 555888888888888876 488 899999887654
No 40
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=1.1e-10 Score=95.40 Aligned_cols=137 Identities=12% Similarity=0.143 Sum_probs=96.0
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccC
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQ 93 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~ 93 (269)
.....+.+++..... ..++.+|||+|||+|..++.++. +..+|+++|+++.+++. .+.|+..+.
T Consensus 18 ~~~~~~~~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~-----a~~~~~~~~------ 81 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLN----LNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEV-----TKQNLAKFN------ 81 (183)
T ss_dssp CCCHHHHHHHHHHHC----CCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHH-----HHHHHHHTT------
T ss_pred cCHHHHHHHHHHHcC----CCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHH-----HHHHHHHcC------
Confidence 444556666666541 34678999999999999988887 55699999999999843 445543320
Q ss_pred CCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCc
Q 024311 94 PESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGS 173 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs 173 (269)
. +++++..+|+.+ +
T Consensus 82 -----------~-~~~~~~~~d~~~-~----------------------------------------------------- 95 (183)
T 2yxd_A 82 -----------I-KNCQIIKGRAED-V----------------------------------------------------- 95 (183)
T ss_dssp -----------C-CSEEEEESCHHH-H-----------------------------------------------------
T ss_pred -----------C-CcEEEEECCccc-c-----------------------------------------------------
Confidence 1 245555554332 0
Q ss_pred hhhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEE
Q 024311 174 RAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAH 253 (269)
Q Consensus 174 ~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~ 253 (269)
...++||+|++..+ ...+.+++.+.++ |+|.+++..... ....++.+.+++.|+ ..+
T Consensus 96 ----------~~~~~~D~i~~~~~----~~~~~~l~~~~~~---~gG~l~~~~~~~-----~~~~~~~~~l~~~g~-~~~ 152 (183)
T 2yxd_A 96 ----------LDKLEFNKAFIGGT----KNIEKIIEILDKK---KINHIVANTIVL-----ENAAKIINEFESRGY-NVD 152 (183)
T ss_dssp ----------GGGCCCSEEEECSC----SCHHHHHHHHHHT---TCCEEEEEESCH-----HHHHHHHHHHHHTTC-EEE
T ss_pred ----------ccCCCCcEEEECCc----ccHHHHHHHHhhC---CCCEEEEEeccc-----ccHHHHHHHHHHcCC-eEE
Confidence 01258999999888 6788899999887 789988887443 257789999999994 444
Q ss_pred EE
Q 024311 254 LI 255 (269)
Q Consensus 254 ~~ 255 (269)
.+
T Consensus 153 ~~ 154 (183)
T 2yxd_A 153 AV 154 (183)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 41
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.33 E-value=6.4e-12 Score=112.89 Aligned_cols=83 Identities=24% Similarity=0.396 Sum_probs=53.9
Q ss_pred CCCCccEEEEecccccc------CCHHHHHHHHHHhcCCCCeEEEEEEcc----------------cccccCcchHHHHH
Q 024311 185 GEGGYDVILLTEIPYSV------TSLKKLYLLIKKCLRPPYGVVYLATKK----------------NYVGFNNAARHLRS 242 (269)
Q Consensus 185 ~~~~fDlIlasD~iY~~------~~~~~L~~~l~~~L~~p~g~~~va~k~----------------~~fg~~~~~~~F~~ 242 (269)
..++||+|++..++.+. .....+++.+.++|+ |+|++++.... .|....-...+|.+
T Consensus 174 ~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~Lk-pGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~ 252 (292)
T 3g07_A 174 QTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLR-PGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSS 252 (292)
T ss_dssp CCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHH
T ss_pred cCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhC-CCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHH
Confidence 45699999999998433 367789999999999 89999885210 01111112468889
Q ss_pred Hhhh--cCceeEEEEeeec------CcceEEEEe
Q 024311 243 LVDE--EGIFGAHLIKEMT------DRDIWKFFL 268 (269)
Q Consensus 243 ~~~~--~g~~~~~~~~~~~------~~~i~~~~~ 268 (269)
.+.+ .||-..+++.... ++.|+-|.+
T Consensus 253 ~L~~~~~GF~~~~~~~~~~~~~~g~~r~i~~~~k 286 (292)
T 3g07_A 253 YLTSPDVGFSSYELVATPHNTSKGFQRPVYLFHK 286 (292)
T ss_dssp HHTSTTTCCCEEEEC-----------CCCEEEEC
T ss_pred HHHhcCCCceEEEEeccCCCCCCCccceEEEEEc
Confidence 9998 8986666654321 466664443
No 42
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.33 E-value=4.6e-11 Score=101.69 Aligned_cols=127 Identities=15% Similarity=0.194 Sum_probs=83.7
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhcc
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRCTTVPNVLANLEQARERQSR 92 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~ 92 (269)
+-.....+++.+... ..++++|||+|||+|..+..++..+. .+|+++|+++.+++. .+.|+..+.
T Consensus 12 ~~~~~~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~-----a~~~~~~~~----- 77 (219)
T 3jwg_A 12 NLNQQRLGTVVAVLK----SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLER-----AKDRLKIDR----- 77 (219)
T ss_dssp CHHHHHHHHHHHHHH----HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHH-----HHHHHTGGG-----
T ss_pred cchHHHHHHHHHHHh----hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHH-----HHHHHHhhc-----
Confidence 334444555555432 13578999999999999988887664 599999999999844 333332110
Q ss_pred CCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccC
Q 024311 93 QPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSG 172 (269)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~g 172 (269)
+. .....++++..+|....+
T Consensus 78 -----~~---~~~~~~v~~~~~d~~~~~---------------------------------------------------- 97 (219)
T 3jwg_A 78 -----LP---EMQRKRISLFQSSLVYRD---------------------------------------------------- 97 (219)
T ss_dssp -----SC---HHHHTTEEEEECCSSSCC----------------------------------------------------
T ss_pred -----cc---cccCcceEEEeCcccccc----------------------------------------------------
Confidence 00 000024666666653211
Q ss_pred chhhhhhcccccCCCCccEEEEeccccccCCH--HHHHHHHHHhcCCCCeEEEEEE
Q 024311 173 SRAWERASEADQGEGGYDVILLTEIPYSVTSL--KKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 173 s~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~--~~L~~~l~~~L~~p~g~~~va~ 226 (269)
...++||+|++.+++++.... ..+++.+.++|+ |+|++++..
T Consensus 98 -----------~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~~i~~~ 141 (219)
T 3jwg_A 98 -----------KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTR-PQTVIVSTP 141 (219)
T ss_dssp -----------GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTC-CSEEEEEEE
T ss_pred -----------cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhC-CCEEEEEcc
Confidence 123589999999999998744 689999999998 788665543
No 43
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.32 E-value=5.9e-11 Score=105.50 Aligned_cols=106 Identities=18% Similarity=0.198 Sum_probs=76.4
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcC---CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKG---AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVH 110 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~g---a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 110 (269)
-.|.+|||||||+|...+.+++.. ..+|++.|+++.+|+.+ +.++... ....+|+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A-----~~~~~~~-----------------~~~~~v~ 126 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERC-----RRHIDAY-----------------KAPTPVD 126 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHH-----HHHHHTS-----------------CCSSCEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHH-----HHHHHhh-----------------ccCceEE
Confidence 367899999999999998877642 12899999999999543 3443211 0224577
Q ss_pred eecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCcc
Q 024311 111 FYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYD 190 (269)
Q Consensus 111 ~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fD 190 (269)
+..+|..+. ..++||
T Consensus 127 ~~~~D~~~~-----------------------------------------------------------------~~~~~d 141 (261)
T 4gek_A 127 VIEGDIRDI-----------------------------------------------------------------AIENAS 141 (261)
T ss_dssp EEESCTTTC-----------------------------------------------------------------CCCSEE
T ss_pred Eeecccccc-----------------------------------------------------------------cccccc
Confidence 766664432 124699
Q ss_pred EEEEeccccccC--CHHHHHHHHHHhcCCCCeEEEEEEc
Q 024311 191 VILLTEIPYSVT--SLKKLYLLIKKCLRPPYGVVYLATK 227 (269)
Q Consensus 191 lIlasD~iY~~~--~~~~L~~~l~~~L~~p~g~~~va~k 227 (269)
+|++.-++++.. ....+++.+.++|+ |+|+++++.+
T Consensus 142 ~v~~~~~l~~~~~~~~~~~l~~i~~~Lk-pGG~lii~e~ 179 (261)
T 4gek_A 142 MVVLNFTLQFLEPSERQALLDKIYQGLN-PGGALVLSEK 179 (261)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred cceeeeeeeecCchhHhHHHHHHHHHcC-CCcEEEEEec
Confidence 999999998754 33568999999999 9999988744
No 44
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.32 E-value=8.1e-12 Score=103.21 Aligned_cols=130 Identities=16% Similarity=0.184 Sum_probs=89.6
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccC
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQ 93 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~ 93 (269)
+....+++.+.+... ...++.+|||+|||+|..++.++..++.+|+++|+++.+++ ..+.|+..+.
T Consensus 26 p~~~~~~~~~~~~l~---~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~-----~a~~~~~~~~------ 91 (187)
T 2fhp_A 26 PTTDKVKESIFNMIG---PYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALK-----VIKENIAITK------ 91 (187)
T ss_dssp CCCHHHHHHHHHHHC---SCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHH-----HHHHHHHHHT------
T ss_pred cCHHHHHHHHHHHHH---hhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHH-----HHHHHHHHhC------
Confidence 445567777666542 23478899999999999999888887779999999999984 4455554331
Q ss_pred CCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCc
Q 024311 94 PESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGS 173 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs 173 (269)
+.++++++.+|+.+.... +
T Consensus 92 -----------~~~~~~~~~~d~~~~~~~-----------------------------------------------~--- 110 (187)
T 2fhp_A 92 -----------EPEKFEVRKMDANRALEQ-----------------------------------------------F--- 110 (187)
T ss_dssp -----------CGGGEEEEESCHHHHHHH-----------------------------------------------H---
T ss_pred -----------CCcceEEEECcHHHHHHH-----------------------------------------------H---
Confidence 123567766665432100 0
Q ss_pred hhhhhhcccccCCCCccEEEEeccccccCCHHHHHHHH--HHhcCCCCeEEEEEEccc
Q 024311 174 RAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLI--KKCLRPPYGVVYLATKKN 229 (269)
Q Consensus 174 ~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l--~~~L~~p~g~~~va~k~~ 229 (269)
.....+||+|++ +..|.....+.+++.+ .++|+ |+|++++.....
T Consensus 111 ---------~~~~~~fD~i~~-~~~~~~~~~~~~~~~l~~~~~L~-~gG~l~~~~~~~ 157 (187)
T 2fhp_A 111 ---------YEEKLQFDLVLL-DPPYAKQEIVSQLEKMLERQLLT-NEAVIVCETDKT 157 (187)
T ss_dssp ---------HHTTCCEEEEEE-CCCGGGCCHHHHHHHHHHTTCEE-EEEEEEEEEETT
T ss_pred ---------HhcCCCCCEEEE-CCCCCchhHHHHHHHHHHhcccC-CCCEEEEEeCCc
Confidence 012458999997 4557777888888888 66788 899998876543
No 45
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.31 E-value=3e-11 Score=99.74 Aligned_cols=124 Identities=18% Similarity=0.244 Sum_probs=89.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..++.++..+. +|+++|+++.+++. .+.|. +++.+...
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~-----a~~~~-----------------------~~~~~~~~ 96 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDY-----AKQDF-----------------------PEARWVVG 96 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHH-----HHHHC-----------------------TTSEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHH-----HHHhC-----------------------CCCcEEEc
Confidence 678999999999999988888876 89999999998843 22222 12344444
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ...++||+|++
T Consensus 97 d~~~~~---------------------------------------------------------------~~~~~~D~i~~ 113 (195)
T 3cgg_A 97 DLSVDQ---------------------------------------------------------------ISETDFDLIVS 113 (195)
T ss_dssp CTTTSC---------------------------------------------------------------CCCCCEEEEEE
T ss_pred ccccCC---------------------------------------------------------------CCCCceeEEEE
Confidence 433211 12458999999
Q ss_pred e-cccccc--CCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEE
Q 024311 195 T-EIPYSV--TSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 195 s-D~iY~~--~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
+ ++++.. +....+++.+.++|+ |+|++++...... +-...++.+.+++.|+-..+.
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~~~~l~-~~G~l~~~~~~~~---~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 114 AGNVMGFLAEDGREPALANIHRALG-ADGRAVIGFGAGR---GWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEETTS---SCCHHHHHHHHHHHTEEEEEE
T ss_pred CCcHHhhcChHHHHHHHHHHHHHhC-CCCEEEEEeCCCC---CcCHHHHHHHHHHcCCEEeee
Confidence 8 777655 445778899999998 8999988754321 236789999999999754444
No 46
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.31 E-value=2.2e-11 Score=103.13 Aligned_cols=131 Identities=18% Similarity=0.189 Sum_probs=91.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+.+|||+|||+|..+..++..++ +|+++|+++.+++.+ +.+ .++.+...
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a-----~~~------------------------~~~~~~~~ 101 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAA-----RAA------------------------GAGEVHLA 101 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHH-----HHT------------------------CSSCEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHH-----HHh------------------------cccccchh
Confidence 568999999999999998888877 899999999988432 222 01222222
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
+...... . ......+||+|++
T Consensus 102 ~~~~~~~------------------------------------------------~-----------~~~~~~~fD~v~~ 122 (227)
T 3e8s_A 102 SYAQLAE------------------------------------------------A-----------KVPVGKDYDLICA 122 (227)
T ss_dssp CHHHHHT------------------------------------------------T-----------CSCCCCCEEEEEE
T ss_pred hHHhhcc------------------------------------------------c-----------ccccCCCccEEEE
Confidence 3221100 0 0013446999999
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccc----------------ccC----------cchHHHHHHhhhcC
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYV----------------GFN----------NAARHLRSLVDEEG 248 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~f----------------g~~----------~~~~~F~~~~~~~g 248 (269)
+.+++ ......+++.+.++|+ |+|++++....... +.. -+..++.+.+++.|
T Consensus 123 ~~~l~-~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 200 (227)
T 3e8s_A 123 NFALL-HQDIIELLSAMRTLLV-PGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAG 200 (227)
T ss_dssp ESCCC-SSCCHHHHHHHHHTEE-EEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTT
T ss_pred Cchhh-hhhHHHHHHHHHHHhC-CCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcC
Confidence 99999 8888999999999999 89999987542110 100 15789999999999
Q ss_pred ceeEEEEe
Q 024311 249 IFGAHLIK 256 (269)
Q Consensus 249 ~~~~~~~~ 256 (269)
|-..++..
T Consensus 201 f~~~~~~~ 208 (227)
T 3e8s_A 201 LRLVSLQE 208 (227)
T ss_dssp EEEEEEEC
T ss_pred CeEEEEec
Confidence 86555543
No 47
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.30 E-value=7.8e-11 Score=101.07 Aligned_cols=101 Identities=21% Similarity=0.211 Sum_probs=74.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..+..++..+. +|+++|+++.+++. .+.+.... ..++++..+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~-----a~~~~~~~-------------------~~~~~~~~~ 91 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSE-----AENKFRSQ-------------------GLKPRLACQ 91 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHH-----HHHHHHHT-------------------TCCCEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHH-----HHHHHhhc-------------------CCCeEEEec
Confidence 678999999999999998888876 89999999999844 33333221 013444444
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ..++||+|++
T Consensus 92 d~~~~~----------------------------------------------------------------~~~~fD~v~~ 107 (246)
T 1y8c_A 92 DISNLN----------------------------------------------------------------INRKFDLITC 107 (246)
T ss_dssp CGGGCC----------------------------------------------------------------CSCCEEEEEE
T ss_pred ccccCC----------------------------------------------------------------ccCCceEEEE
Confidence 432210 1258999999
Q ss_pred ec-ccccc---CCHHHHHHHHHHhcCCCCeEEEEE
Q 024311 195 TE-IPYSV---TSLKKLYLLIKKCLRPPYGVVYLA 225 (269)
Q Consensus 195 sD-~iY~~---~~~~~L~~~l~~~L~~p~g~~~va 225 (269)
+. ++++. .....+++.+.++|+ |+|++++.
T Consensus 108 ~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~ 141 (246)
T 1y8c_A 108 CLDSTNYIIDSDDLKKYFKAVSNHLK-EGGVFIFD 141 (246)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHTTEE-EEEEEEEE
T ss_pred cCccccccCCHHHHHHHHHHHHHhcC-CCcEEEEE
Confidence 97 98877 567788888899998 89998874
No 48
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.30 E-value=1.2e-11 Score=104.87 Aligned_cols=115 Identities=16% Similarity=0.166 Sum_probs=82.9
Q ss_pred HHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCC
Q 024311 17 IDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPES 96 (269)
Q Consensus 17 ~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~ 96 (269)
..+.+++.... ...++.+|||+|||+|..++.++..+. +|+++|+++.+++. .+.|...
T Consensus 37 ~~~~~~l~~~~----~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~-----a~~~~~~----------- 95 (216)
T 3ofk_A 37 ERHTQLLRLSL----SSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGR-----ACQRTKR----------- 95 (216)
T ss_dssp HHHHHHHHHHT----TTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHH-----HHHHTTT-----------
T ss_pred HHHHHHHHHHc----ccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHH-----HHHhccc-----------
Confidence 34445554432 233678999999999999999888876 89999999998843 3333211
Q ss_pred CCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhh
Q 024311 97 SLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAW 176 (269)
Q Consensus 97 ~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W 176 (269)
.+++++..+|....+
T Consensus 96 ---------~~~~~~~~~d~~~~~-------------------------------------------------------- 110 (216)
T 3ofk_A 96 ---------WSHISWAATDILQFS-------------------------------------------------------- 110 (216)
T ss_dssp ---------CSSEEEEECCTTTCC--------------------------------------------------------
T ss_pred ---------CCCeEEEEcchhhCC--------------------------------------------------------
Confidence 125666666554321
Q ss_pred hhhcccccCCCCccEEEEeccccccCCHH---HHHHHHHHhcCCCCeEEEEEE
Q 024311 177 ERASEADQGEGGYDVILLTEIPYSVTSLK---KLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 177 ~~~~~~~~~~~~fDlIlasD~iY~~~~~~---~L~~~l~~~L~~p~g~~~va~ 226 (269)
..++||+|+++.++++....+ .+++.+.++|+ |+|++++++
T Consensus 111 --------~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~ 154 (216)
T 3ofk_A 111 --------TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLA-PGGHLVFGS 154 (216)
T ss_dssp --------CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred --------CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcC-CCCEEEEEe
Confidence 245899999999999888774 55888888998 899999875
No 49
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.30 E-value=1.2e-10 Score=104.32 Aligned_cols=131 Identities=15% Similarity=0.086 Sum_probs=92.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
-.+.+|||+|||+|..++.++.. |. +|+++|+++.+++. .+.+.... .+..++++.
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~-----a~~~~~~~-----------------~~~~~v~~~ 127 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDV-NVIGLTLSENQYAH-----DKAMFDEV-----------------DSPRRKEVR 127 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEECCHHHHHH-----HHHHHHHS-----------------CCSSCEEEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCC-EEEEEECCHHHHHH-----HHHHHHhc-----------------CCCCceEEE
Confidence 36789999999999999888876 74 89999999999844 34443221 022345555
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|+.+ ..++||+|
T Consensus 128 ~~d~~~------------------------------------------------------------------~~~~fD~v 141 (302)
T 3hem_A 128 IQGWEE------------------------------------------------------------------FDEPVDRI 141 (302)
T ss_dssp ECCGGG------------------------------------------------------------------CCCCCSEE
T ss_pred ECCHHH------------------------------------------------------------------cCCCccEE
Confidence 554321 14589999
Q ss_pred EEecccccc---------CCHHHHHHHHHHhcCCCCeEEEEEEccc---------------------------ccc--cC
Q 024311 193 LLTEIPYSV---------TSLKKLYLLIKKCLRPPYGVVYLATKKN---------------------------YVG--FN 234 (269)
Q Consensus 193 lasD~iY~~---------~~~~~L~~~l~~~L~~p~g~~~va~k~~---------------------------~fg--~~ 234 (269)
++..++++. ...+.+++.+.++|+ |+|++++..-.. .|. .-
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 220 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTP-DDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRL 220 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSC-TTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCC
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcC-CCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCC
Confidence 999999887 445889999999998 899988864211 010 11
Q ss_pred cchHHHHHHhhhcCceeEEE
Q 024311 235 NAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 235 ~~~~~F~~~~~~~g~~~~~~ 254 (269)
.+..++.+.+++.||-..++
T Consensus 221 ~s~~~~~~~l~~aGf~~~~~ 240 (302)
T 3hem_A 221 PRISQVDYYSSNAGWKVERY 240 (302)
T ss_dssp CCHHHHHHHHHHHTCEEEEE
T ss_pred CCHHHHHHHHHhCCcEEEEE
Confidence 24678888999999754444
No 50
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.30 E-value=6e-12 Score=107.02 Aligned_cols=110 Identities=19% Similarity=0.324 Sum_probs=77.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCC-Ceeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLA-PSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~ 113 (269)
++.+|||+|||+|..++.++..++.+|++.|+++++++ ..+.|+..+. +. .+++++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~-----~a~~~~~~~~-----------------~~~~~v~~~~ 110 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVAN-----QLKKNLQTLK-----------------CSSEQAEVIN 110 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHH-----HHHHHHHHTT-----------------CCTTTEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHH-----HHHHHHHHhC-----------------CCccceEEEE
Confidence 57899999999999999877778779999999999984 4455554321 11 2456655
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCC-ccEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGG-YDVI 192 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~-fDlI 192 (269)
+|..+.. + ....++ ||+|
T Consensus 111 ~d~~~~~--------------------------------------------------~-----------~~~~~~~fD~I 129 (201)
T 2ift_A 111 QSSLDFL--------------------------------------------------K-----------QPQNQPHFDVV 129 (201)
T ss_dssp SCHHHHT--------------------------------------------------T-----------SCCSSCCEEEE
T ss_pred CCHHHHH--------------------------------------------------H-----------hhccCCCCCEE
Confidence 5532210 0 012357 9999
Q ss_pred EEeccccccCCHHHHHHHH--HHhcCCCCeEEEEEEccc
Q 024311 193 LLTEIPYSVTSLKKLYLLI--KKCLRPPYGVVYLATKKN 229 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l--~~~L~~p~g~~~va~k~~ 229 (269)
++ |..|.....+.+++.+ .++|+ |+|++++.+...
T Consensus 130 ~~-~~~~~~~~~~~~l~~~~~~~~Lk-pgG~l~i~~~~~ 166 (201)
T 2ift_A 130 FL-DPPFHFNLAEQAISLLCENNWLK-PNALIYVETEKD 166 (201)
T ss_dssp EE-CCCSSSCHHHHHHHHHHHTTCEE-EEEEEEEEEESS
T ss_pred EE-CCCCCCccHHHHHHHHHhcCccC-CCcEEEEEECCC
Confidence 98 4557777788888888 45688 899999887654
No 51
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.30 E-value=6e-11 Score=97.69 Aligned_cols=140 Identities=16% Similarity=0.190 Sum_probs=96.2
Q ss_pred cHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCC
Q 024311 15 SSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQP 94 (269)
Q Consensus 15 as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~ 94 (269)
....+..++.... ...++.+|||+|||+|..++.++..+ .+|+++|+++.+++ ..+.|+..+.
T Consensus 17 ~~~~~~~~~~~~~----~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~-----~a~~~~~~~~------- 79 (192)
T 1l3i_A 17 TAMEVRCLIMCLA----EPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAIS-----TTEMNLQRHG------- 79 (192)
T ss_dssp CCHHHHHHHHHHH----CCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHH-----HHHHHHHHTT-------
T ss_pred ChHHHHHHHHHhc----CCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHH-----HHHHHHHHcC-------
Confidence 3445556665543 23467899999999999999988877 59999999999984 3445543320
Q ss_pred CCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCch
Q 024311 95 ESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSR 174 (269)
Q Consensus 95 ~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~ 174 (269)
...++++..+|+.+. +
T Consensus 80 ----------~~~~~~~~~~d~~~~--------------------------------------------------~---- 95 (192)
T 1l3i_A 80 ----------LGDNVTLMEGDAPEA--------------------------------------------------L---- 95 (192)
T ss_dssp ----------CCTTEEEEESCHHHH--------------------------------------------------H----
T ss_pred ----------CCcceEEEecCHHHh--------------------------------------------------c----
Confidence 112455544443220 0
Q ss_pred hhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEE
Q 024311 175 AWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 175 ~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
....+||+|+++.++. ....+++.+.++|+ |+|++++..... ....++.+.+++.|+ ..+.
T Consensus 96 ---------~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~-~gG~l~~~~~~~-----~~~~~~~~~l~~~g~-~~~~ 156 (192)
T 1l3i_A 96 ---------CKIPDIDIAVVGGSGG---ELQEILRIIKDKLK-PGGRIIVTAILL-----ETKFEAMECLRDLGF-DVNI 156 (192)
T ss_dssp ---------TTSCCEEEEEESCCTT---CHHHHHHHHHHTEE-EEEEEEEEECBH-----HHHHHHHHHHHHTTC-CCEE
T ss_pred ---------ccCCCCCEEEECCchH---HHHHHHHHHHHhcC-CCcEEEEEecCc-----chHHHHHHHHHHCCC-ceEE
Confidence 0114899999876653 56889999999998 899988876543 256788999999997 4443
No 52
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.30 E-value=4.2e-11 Score=101.95 Aligned_cols=111 Identities=17% Similarity=0.221 Sum_probs=76.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+++|||+|||+|..+..++..+. .+|+++|+++.+++. .+.|+..+. +. .....++++..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~-----a~~~~~~~~----------~~---~~~~~~v~~~~ 90 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEI-----AQERLDRLR----------LP---RNQWERLQLIQ 90 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHH-----HHHHHTTCC----------CC---HHHHTTEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHH-----HHHHHHHhc----------CC---cccCcceEEEe
Confidence 577999999999999988887654 599999999999844 344432110 00 00012466666
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|....+ ...++||+|+
T Consensus 91 ~d~~~~~---------------------------------------------------------------~~~~~fD~v~ 107 (217)
T 3jwh_A 91 GALTYQD---------------------------------------------------------------KRFHGYDAAT 107 (217)
T ss_dssp CCTTSCC---------------------------------------------------------------GGGCSCSEEE
T ss_pred CCccccc---------------------------------------------------------------ccCCCcCEEe
Confidence 6543211 1235899999
Q ss_pred EeccccccC--CHHHHHHHHHHhcCCCCeEEEEEEc
Q 024311 194 LTEIPYSVT--SLKKLYLLIKKCLRPPYGVVYLATK 227 (269)
Q Consensus 194 asD~iY~~~--~~~~L~~~l~~~L~~p~g~~~va~k 227 (269)
+.+++++.. ....+++.+.++|+ |+|++++...
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~ 142 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQ-PKIVIVTTPN 142 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTC-CSEEEEEEEB
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcC-CCEEEEEccC
Confidence 999999876 44789999999998 8896666543
No 53
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.29 E-value=7.6e-11 Score=109.91 Aligned_cols=150 Identities=23% Similarity=0.265 Sum_probs=100.5
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHc--CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeee
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLK--GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVH 110 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~--ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 110 (269)
..++.+|||||||+|..++.++.. ...+|+++|+++.+++.+ +.|+..+....... ...++++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a-----~~~~~~~~~~~~g~----------~~~~~v~ 145 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVA-----RKYVEYHAEKFFGS----------PSRSNVR 145 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHH-----HHTHHHHHHHHHSS----------TTCCCEE
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHH-----HHHHHHhhhhcccc----------cCCCceE
Confidence 347889999999999999877664 234899999999998543 33333221000000 0114678
Q ss_pred eecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCcc
Q 024311 111 FYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYD 190 (269)
Q Consensus 111 ~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fD 190 (269)
|..+|+....... ......++||
T Consensus 146 ~~~~d~~~l~~~~---------------------------------------------------------~~~~~~~~fD 168 (383)
T 4fsd_A 146 FLKGFIENLATAE---------------------------------------------------------PEGVPDSSVD 168 (383)
T ss_dssp EEESCTTCGGGCB---------------------------------------------------------SCCCCTTCEE
T ss_pred EEEccHHHhhhcc---------------------------------------------------------cCCCCCCCEE
Confidence 8888776542100 0002356899
Q ss_pred EEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccc-------------c----cCcchHHHHHHhhhcCceeEE
Q 024311 191 VILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYV-------------G----FNNAARHLRSLVDEEGIFGAH 253 (269)
Q Consensus 191 lIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~f-------------g----~~~~~~~F~~~~~~~g~~~~~ 253 (269)
+|++..++++....+.+++.+.++|+ |+|++++....... + ..-...++.+.+++.||-..+
T Consensus 169 ~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~ 247 (383)
T 4fsd_A 169 IVISNCVCNLSTNKLALFKEIHRVLR-DGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDVR 247 (383)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCEE
T ss_pred EEEEccchhcCCCHHHHHHHHHHHcC-CCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceEE
Confidence 99999999999999999999999999 89999887421110 0 012358899999999985554
Q ss_pred EE
Q 024311 254 LI 255 (269)
Q Consensus 254 ~~ 255 (269)
++
T Consensus 248 ~~ 249 (383)
T 4fsd_A 248 LV 249 (383)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 54
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.29 E-value=2.6e-11 Score=107.69 Aligned_cols=107 Identities=19% Similarity=0.179 Sum_probs=80.9
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCC
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESS 97 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~ 97 (269)
.|.++|.+.. -.+.+|||||||+|..+..++..+. +|+++|.++.+++.+.
T Consensus 28 ~l~~~l~~~~------~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~---------------------- 78 (257)
T 4hg2_A 28 ALFRWLGEVA------PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQAL---------------------- 78 (257)
T ss_dssp HHHHHHHHHS------SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCC----------------------
T ss_pred HHHHHHHHhc------CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhh----------------------
Confidence 4667777653 1356999999999999988888876 8999999999884320
Q ss_pred CCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhh
Q 024311 98 LTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWE 177 (269)
Q Consensus 98 ~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~ 177 (269)
..+++.+..++.++++
T Consensus 79 -------~~~~v~~~~~~~e~~~--------------------------------------------------------- 94 (257)
T 4hg2_A 79 -------RHPRVTYAVAPAEDTG--------------------------------------------------------- 94 (257)
T ss_dssp -------CCTTEEEEECCTTCCC---------------------------------------------------------
T ss_pred -------hcCCceeehhhhhhhc---------------------------------------------------------
Confidence 1135677666655432
Q ss_pred hhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEE
Q 024311 178 RASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLA 225 (269)
Q Consensus 178 ~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va 225 (269)
..+++||+|+++.++++. ..+.+++.++++|+ |+|++.+.
T Consensus 95 ------~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLk-pgG~l~~~ 134 (257)
T 4hg2_A 95 ------LPPASVDVAIAAQAMHWF-DLDRFWAELRRVAR-PGAVFAAV 134 (257)
T ss_dssp ------CCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEE-EEEEEEEE
T ss_pred ------ccCCcccEEEEeeehhHh-hHHHHHHHHHHHcC-CCCEEEEE
Confidence 245689999999999776 58889999999999 88876554
No 55
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.29 E-value=7.6e-12 Score=103.13 Aligned_cols=129 Identities=19% Similarity=0.210 Sum_probs=82.9
Q ss_pred eeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhc
Q 024311 12 CWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQS 91 (269)
Q Consensus 12 vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~ 91 (269)
.-+....+.+.+..... ...++++|||+|||+|..++.++..+..+|+++|+++.+++ ..+.|+..+.
T Consensus 11 ~rp~~~~~~~~~~~~l~---~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~-----~a~~~~~~~~---- 78 (177)
T 2esr_A 11 TRPTSDKVRGAIFNMIG---PYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQA-----IIQDNIIMTK---- 78 (177)
T ss_dssp -------CHHHHHHHHC---SCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHH-----HHHHHHHTTT----
T ss_pred CCcCHHHHHHHHHHHHH---hhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHH-----HHHHHHHHcC----
Confidence 33445555666655432 13478899999999999999888887779999999999984 4455553220
Q ss_pred cCCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCccccccccc
Q 024311 92 RQPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLS 171 (269)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (269)
+..++++..+|+.+..
T Consensus 79 -------------~~~~~~~~~~d~~~~~--------------------------------------------------- 94 (177)
T 2esr_A 79 -------------AENRFTLLKMEAERAI--------------------------------------------------- 94 (177)
T ss_dssp -------------CGGGEEEECSCHHHHH---------------------------------------------------
T ss_pred -------------CCCceEEEECcHHHhH---------------------------------------------------
Confidence 1234666555543210
Q ss_pred CchhhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHH--HhcCCCCeEEEEEEccc
Q 024311 172 GSRAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIK--KCLRPPYGVVYLATKKN 229 (269)
Q Consensus 172 gs~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~--~~L~~p~g~~~va~k~~ 229 (269)
+ ....+||+|++ +..|.....+.+++.+. ++|+ |+|++++.+...
T Consensus 95 ---------~--~~~~~fD~i~~-~~~~~~~~~~~~~~~l~~~~~L~-~gG~l~~~~~~~ 141 (177)
T 2esr_A 95 ---------D--CLTGRFDLVFL-DPPYAKETIVATIEALAAKNLLS-EQVMVVCETDKT 141 (177)
T ss_dssp ---------H--HBCSCEEEEEE-CCSSHHHHHHHHHHHHHHTTCEE-EEEEEEEEEETT
T ss_pred ---------H--hhcCCCCEEEE-CCCCCcchHHHHHHHHHhCCCcC-CCcEEEEEECCc
Confidence 0 02246999997 55565556677777776 7788 899999886543
No 56
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.29 E-value=9.4e-11 Score=98.92 Aligned_cols=136 Identities=18% Similarity=0.157 Sum_probs=94.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+.+|||+|||+|..+..++..+. +|++.|+++.+++.+.. . ..+++++..+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~---------~------------------~~~~~~~~~~ 97 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR---------H------------------GLDNVEFRQQ 97 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG---------G------------------CCTTEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh---------c------------------CCCCeEEEec
Confidence 567999999999999988888876 89999999998854311 0 0124566555
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|.... ...++||+|++
T Consensus 98 d~~~~----------------------------------------------------------------~~~~~~D~v~~ 113 (218)
T 3ou2_A 98 DLFDW----------------------------------------------------------------TPDRQWDAVFF 113 (218)
T ss_dssp CTTSC----------------------------------------------------------------CCSSCEEEEEE
T ss_pred ccccC----------------------------------------------------------------CCCCceeEEEE
Confidence 54321 13458999999
Q ss_pred eccccccCC--HHHHHHHHHHhcCCCCeEEEEEEccc--------c-----------ccc---------CcchHHHHHHh
Q 024311 195 TEIPYSVTS--LKKLYLLIKKCLRPPYGVVYLATKKN--------Y-----------VGF---------NNAARHLRSLV 244 (269)
Q Consensus 195 sD~iY~~~~--~~~L~~~l~~~L~~p~g~~~va~k~~--------~-----------fg~---------~~~~~~F~~~~ 244 (269)
+.++++... ...+++.+.++|+ |+|++++..... + ++. -....++.+.+
T Consensus 114 ~~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 192 (218)
T 3ou2_A 114 AHWLAHVPDDRFEAFWESVRSAVA-PGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERL 192 (218)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHH
T ss_pred echhhcCCHHHHHHHHHHHHHHcC-CCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHH
Confidence 999998877 3788999999998 899988874311 0 000 01457889999
Q ss_pred hhcCceeEEEEeeecCcceEE
Q 024311 245 DEEGIFGAHLIKEMTDRDIWK 265 (269)
Q Consensus 245 ~~~g~~~~~~~~~~~~~~i~~ 265 (269)
++.|| ++.. ++..+.....
T Consensus 193 ~~aGf-~v~~-~~~~~~~~~~ 211 (218)
T 3ou2_A 193 TALGW-SCSV-DEVHPGFLYA 211 (218)
T ss_dssp HHTTE-EEEE-EEEETTEEEE
T ss_pred HHCCC-EEEe-eeccccceEe
Confidence 99997 3333 5555554443
No 57
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.29 E-value=1e-11 Score=108.17 Aligned_cols=67 Identities=16% Similarity=0.161 Sum_probs=49.2
Q ss_pred CCccEEEEecccc----ccCCHHHHHHHHHHhcCCCCeEEEEEEcc--ccccc--------CcchHHHHHHhhhcCceeE
Q 024311 187 GGYDVILLTEIPY----SVTSLKKLYLLIKKCLRPPYGVVYLATKK--NYVGF--------NNAARHLRSLVDEEGIFGA 252 (269)
Q Consensus 187 ~~fDlIlasD~iY----~~~~~~~L~~~l~~~L~~p~g~~~va~k~--~~fg~--------~~~~~~F~~~~~~~g~~~~ 252 (269)
++||+|+++.+++ +......+++.+.++|+ |+|++++.... .++.. .-...++.+.+++.||-..
T Consensus 156 ~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 234 (265)
T 2i62_A 156 PPADCLLSTLCLDAACPDLPAYRTALRNLGSLLK-PGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIE 234 (265)
T ss_dssp CCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEE
T ss_pred CCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCC-CCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEE
Confidence 6899999999999 66677889999999999 89998886421 11111 1135588899999998544
Q ss_pred EE
Q 024311 253 HL 254 (269)
Q Consensus 253 ~~ 254 (269)
++
T Consensus 235 ~~ 236 (265)
T 2i62_A 235 QF 236 (265)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 58
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.28 E-value=3.6e-11 Score=106.41 Aligned_cols=108 Identities=24% Similarity=0.151 Sum_probs=78.8
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.++.+|||+|||+|..++.++..+..+|+++|+++.+++. .+.+.... ....++++..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~-----a~~~~~~~-----------------~~~~~v~~~~ 120 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSIND-----ARVRARNM-----------------KRRFKVFFRA 120 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHH-----HHHHHHTS-----------------CCSSEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHH-----HHHHHHhc-----------------CCCccEEEEE
Confidence 3678999999999988888877777799999999999843 33343211 0123566666
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|....+. ...++||+|+
T Consensus 121 ~d~~~~~~--------------------------------------------------------------~~~~~fD~v~ 138 (298)
T 1ri5_A 121 QDSYGRHM--------------------------------------------------------------DLGKEFDVIS 138 (298)
T ss_dssp SCTTTSCC--------------------------------------------------------------CCSSCEEEEE
T ss_pred CCcccccc--------------------------------------------------------------CCCCCcCEEE
Confidence 66544210 0245899999
Q ss_pred Eeccccc----cCCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 194 LTEIPYS----VTSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 194 asD~iY~----~~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
+..++++ ......+++.+.++|+ |+|++++..
T Consensus 139 ~~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 174 (298)
T 1ri5_A 139 SQFSFHYAFSTSESLDIAQRNIARHLR-PGGYFIMTV 174 (298)
T ss_dssp EESCGGGGGSSHHHHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred ECchhhhhcCCHHHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 9999865 4556778899999998 899998875
No 59
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.27 E-value=1.3e-10 Score=104.68 Aligned_cols=116 Identities=16% Similarity=0.126 Sum_probs=81.7
Q ss_pred HHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCC
Q 024311 17 IDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPE 95 (269)
Q Consensus 17 ~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~ 95 (269)
..+.+.+.+.. ....+.+|||+|||+|...+.++.. |+ +|+++|+++.+++. .+.+....
T Consensus 76 ~~~~~~~~~~~----~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~-----a~~~~~~~--------- 136 (318)
T 2fk8_A 76 YAKVDLNLDKL----DLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHAR-----CEQVLASI--------- 136 (318)
T ss_dssp HHHHHHHHTTS----CCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHH-----HHHHHHTS---------
T ss_pred HHHHHHHHHhc----CCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHH-----HHHHHHhc---------
Confidence 34445555442 2346789999999999999887765 77 89999999999844 33333211
Q ss_pred CCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchh
Q 024311 96 SSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRA 175 (269)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~ 175 (269)
....++++..+|..+
T Consensus 137 --------~~~~~v~~~~~d~~~--------------------------------------------------------- 151 (318)
T 2fk8_A 137 --------DTNRSRQVLLQGWED--------------------------------------------------------- 151 (318)
T ss_dssp --------CCSSCEEEEESCGGG---------------------------------------------------------
T ss_pred --------CCCCceEEEECChHH---------------------------------------------------------
Confidence 012345554443221
Q ss_pred hhhhcccccCCCCccEEEEecccccc--CCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 176 WERASEADQGEGGYDVILLTEIPYSV--TSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 176 W~~~~~~~~~~~~fDlIlasD~iY~~--~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
.+++||+|++.+++++. .....+++.+.++|+ |+|++++..
T Consensus 152 ---------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 194 (318)
T 2fk8_A 152 ---------FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMP-ADGRMTVQS 194 (318)
T ss_dssp ---------CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSC-TTCEEEEEE
T ss_pred ---------CCCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcC-CCcEEEEEE
Confidence 12589999999999887 688999999999999 899988864
No 60
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.27 E-value=5.5e-11 Score=98.94 Aligned_cols=104 Identities=23% Similarity=0.348 Sum_probs=77.3
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.++.+|||+|||+|..++.++..+. +|+++|+++.+++. .+.|...+. . +++++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~-----a~~~~~~~~-----------------~-~~~~~~~ 86 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIAN-----VERIKSIEN-----------------L-DNLHTRV 86 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHH-----HHHHHHHHT-----------------C-TTEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHH-----HHHHHHhCC-----------------C-CCcEEEE
Confidence 3677999999999999988888876 89999999999843 344443220 0 2355554
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|....+ . .++||+|+
T Consensus 87 ~d~~~~~---------------------------------------------------------------~-~~~~D~v~ 102 (199)
T 2xvm_A 87 VDLNNLT---------------------------------------------------------------F-DRQYDFIL 102 (199)
T ss_dssp CCGGGCC---------------------------------------------------------------C-CCCEEEEE
T ss_pred cchhhCC---------------------------------------------------------------C-CCCceEEE
Confidence 4433210 1 45899999
Q ss_pred EeccccccC--CHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 194 LTEIPYSVT--SLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 194 asD~iY~~~--~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
++.++++.. ....+++.+.++|+ |+|++++..
T Consensus 103 ~~~~l~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~ 136 (199)
T 2xvm_A 103 STVVLMFLEAKTIPGLIANMQRCTK-PGGYNLIVA 136 (199)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcC-CCeEEEEEE
Confidence 999999776 78899999999999 899877653
No 61
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.27 E-value=5.8e-11 Score=104.72 Aligned_cols=138 Identities=20% Similarity=0.222 Sum_probs=95.1
Q ss_pred eccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhcc
Q 024311 13 WESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSR 92 (269)
Q Consensus 13 W~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~ 92 (269)
.+......++|... ...+.+|||+|||+|..++.++..|+ +|+++|+++.++ ...+.|...+.
T Consensus 104 ~~tt~~~~~~l~~~------~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v-----~~a~~n~~~~~----- 166 (254)
T 2nxc_A 104 HETTRLALKALARH------LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVL-----PQAEANAKRNG----- 166 (254)
T ss_dssp SHHHHHHHHHHHHH------CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGH-----HHHHHHHHHTT-----
T ss_pred CHHHHHHHHHHHHh------cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHH-----HHHHHHHHHcC-----
Confidence 44555566666554 23578999999999999999999998 999999999988 44555654431
Q ss_pred CCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccC
Q 024311 93 QPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSG 172 (269)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~g 172 (269)
.. +++..+|+...
T Consensus 167 ------------~~--v~~~~~d~~~~----------------------------------------------------- 179 (254)
T 2nxc_A 167 ------------VR--PRFLEGSLEAA----------------------------------------------------- 179 (254)
T ss_dssp ------------CC--CEEEESCHHHH-----------------------------------------------------
T ss_pred ------------Cc--EEEEECChhhc-----------------------------------------------------
Confidence 11 34433332210
Q ss_pred chhhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeE
Q 024311 173 SRAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGA 252 (269)
Q Consensus 173 s~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~ 252 (269)
....+||+|+++ .+++ ....++..+.++|+ |+|+++++.-.. .....+.+.+++.||-..
T Consensus 180 -----------~~~~~fD~Vv~n-~~~~--~~~~~l~~~~~~Lk-pgG~lils~~~~-----~~~~~v~~~l~~~Gf~~~ 239 (254)
T 2nxc_A 180 -----------LPFGPFDLLVAN-LYAE--LHAALAPRYREALV-PGGRALLTGILK-----DRAPLVREAMAGAGFRPL 239 (254)
T ss_dssp -----------GGGCCEEEEEEE-CCHH--HHHHHHHHHHHHEE-EEEEEEEEEEEG-----GGHHHHHHHHHHTTCEEE
T ss_pred -----------CcCCCCCEEEEC-CcHH--HHHHHHHHHHHHcC-CCCEEEEEeecc-----CCHHHHHHHHHHCCCEEE
Confidence 013489999985 3332 36778888999998 899998875332 257889999999998544
Q ss_pred EE
Q 024311 253 HL 254 (269)
Q Consensus 253 ~~ 254 (269)
++
T Consensus 240 ~~ 241 (254)
T 2nxc_A 240 EE 241 (254)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 62
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.25 E-value=1.8e-10 Score=95.51 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=40.0
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 16 SIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 16 s~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
...++..+... ..-.+.+|||+|||+|..++.++..+ .+|++.|+++++++.
T Consensus 8 ~~~~~~~~l~~-----~~~~~~~vLDiGcG~G~~~~~la~~~-~~v~~vD~s~~~l~~ 59 (185)
T 3mti_A 8 PIHMSHDFLAE-----VLDDESIVVDATMGNGNDTAFLAGLS-KKVYAFDVQEQALGK 59 (185)
T ss_dssp HHHHHHHHHHT-----TCCTTCEEEESCCTTSHHHHHHHTTS-SEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHH-----hCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEECCHHHHHH
Confidence 34455554443 23368899999999999999988885 499999999999844
No 63
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.25 E-value=1.4e-10 Score=108.66 Aligned_cols=127 Identities=21% Similarity=0.265 Sum_probs=90.8
Q ss_pred eeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhc
Q 024311 12 CWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQS 91 (269)
Q Consensus 12 vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~ 91 (269)
+-+.+..|.+++..... ....++.+|||||||+|..++.++..++ +|+++|+++.+++ ..+.|+..+.
T Consensus 212 ~d~~t~~ll~~l~~~l~--~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~-----~A~~n~~~~~---- 279 (381)
T 3dmg_A 212 VDPASLLLLEALQERLG--PEGVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVL-----SLQKGLEANA---- 279 (381)
T ss_dssp CCHHHHHHHHHHHHHHC--TTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHH-----HHHHHHHHTT----
T ss_pred CCHHHHHHHHHHHHhhc--ccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHH-----HHHHHHHHcC----
Confidence 34566777777766431 1234788999999999999999998887 9999999999984 4455554331
Q ss_pred cCCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCccccccccc
Q 024311 92 RQPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLS 171 (269)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (269)
.+++++.+|.....
T Consensus 280 ---------------~~v~~~~~D~~~~~--------------------------------------------------- 293 (381)
T 3dmg_A 280 ---------------LKAQALHSDVDEAL--------------------------------------------------- 293 (381)
T ss_dssp ---------------CCCEEEECSTTTTS---------------------------------------------------
T ss_pred ---------------CCeEEEEcchhhcc---------------------------------------------------
Confidence 12455555544321
Q ss_pred CchhhhhhcccccCCCCccEEEEeccccc-----cCCHHHHHHHHHHhcCCCCeEEEEEEccc
Q 024311 172 GSRAWERASEADQGEGGYDVILLTEIPYS-----VTSLKKLYLLIKKCLRPPYGVVYLATKKN 229 (269)
Q Consensus 172 gs~~W~~~~~~~~~~~~fDlIlasD~iY~-----~~~~~~L~~~l~~~L~~p~g~~~va~k~~ 229 (269)
...++||+|++...++. ......+++.+.++|+ |+|+++|.+.++
T Consensus 294 ------------~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~Lk-pGG~l~iv~n~~ 343 (381)
T 3dmg_A 294 ------------TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLR-PGGVFFLVSNPF 343 (381)
T ss_dssp ------------CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEE-EEEEEEEEECTT
T ss_pred ------------ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcC-cCcEEEEEEcCC
Confidence 12368999998766665 4556788999999999 899999987664
No 64
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.25 E-value=1.2e-10 Score=104.27 Aligned_cols=110 Identities=19% Similarity=0.189 Sum_probs=80.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHH--cCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACL--KGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~--~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++.+|||+|||+|..++.++. .+..+|+++|+++.+++. .+.|..... ...++++|.
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~-----a~~~~~~~~----------------~~~~~v~~~ 94 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKT-----AEVIKEGSP----------------DTYKNVSFK 94 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHH-----HHHHHHHCC-----------------CCTTEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHH-----HHHHHHhcc----------------CCCCceEEE
Confidence 688999999999999988774 345699999999999844 334432210 012467888
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+.+. . . ......++||+|
T Consensus 95 ~~d~~~~~~-~----~----------------------------------------------------~~~~~~~~fD~V 117 (299)
T 3g5t_A 95 ISSSDDFKF-L----G----------------------------------------------------ADSVDKQKIDMI 117 (299)
T ss_dssp ECCTTCCGG-G----C----------------------------------------------------TTTTTSSCEEEE
T ss_pred EcCHHhCCc-c----c----------------------------------------------------cccccCCCeeEE
Confidence 888766431 0 0 000123689999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYL 224 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~v 224 (269)
+++.++++. ....+++.+.++|+ |+|.+++
T Consensus 118 ~~~~~l~~~-~~~~~l~~~~~~Lk-pgG~l~i 147 (299)
T 3g5t_A 118 TAVECAHWF-DFEKFQRSAYANLR-KDGTIAI 147 (299)
T ss_dssp EEESCGGGS-CHHHHHHHHHHHEE-EEEEEEE
T ss_pred eHhhHHHHh-CHHHHHHHHHHhcC-CCcEEEE
Confidence 999999999 99999999999999 8998877
No 65
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.25 E-value=2.4e-11 Score=107.28 Aligned_cols=42 Identities=10% Similarity=0.272 Sum_probs=36.6
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHh
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~ 74 (269)
..+|++|||||||+|+..+.++..|+.+|+++|+++.+++.+
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a 94 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREEL 94 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHH
Confidence 457899999999999888888888887899999999999653
No 66
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.25 E-value=2.4e-10 Score=97.43 Aligned_cols=119 Identities=18% Similarity=0.173 Sum_probs=85.6
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
..+.+|||+|||+|..++.++..+. +|++.|+++++++. .+.|+..+. ...++++..
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~-~v~~vD~s~~~~~~-----a~~~~~~~g-----------------~~~~v~~~~ 110 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGG-RAITIEPRADRIEN-----IQKNIDTYG-----------------LSPRMRAVQ 110 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHH-----HHHHHHHTT-----------------CTTTEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC-EEEEEeCCHHHHHH-----HHHHHHHcC-----------------CCCCEEEEe
Confidence 3678999999999999999888854 89999999999844 344543320 112566665
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+.. .....||+|+
T Consensus 111 ~d~~~~~---------------------------------------------------------------~~~~~~D~v~ 127 (204)
T 3njr_A 111 GTAPAAL---------------------------------------------------------------ADLPLPEAVF 127 (204)
T ss_dssp SCTTGGG---------------------------------------------------------------TTSCCCSEEE
T ss_pred Cchhhhc---------------------------------------------------------------ccCCCCCEEE
Confidence 5543310 0224799999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCc
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGI 249 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~ 249 (269)
....+ ..+ +++.+.++|+ |+|++++..... +...++.+.+++.|+
T Consensus 128 ~~~~~----~~~-~l~~~~~~Lk-pgG~lv~~~~~~-----~~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 128 IGGGG----SQA-LYDRLWEWLA-PGTRIVANAVTL-----ESETLLTQLHARHGG 172 (204)
T ss_dssp ECSCC----CHH-HHHHHHHHSC-TTCEEEEEECSH-----HHHHHHHHHHHHHCS
T ss_pred ECCcc----cHH-HHHHHHHhcC-CCcEEEEEecCc-----ccHHHHHHHHHhCCC
Confidence 75533 455 8999999998 899998876543 367889999999985
No 67
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.24 E-value=7.6e-11 Score=102.38 Aligned_cols=100 Identities=16% Similarity=0.156 Sum_probs=76.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
..+.+|||+|||+|..+..++.. +..+|+++|+++.+++.+ +.+. +++++.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a-----~~~~-----------------------~~~~~~ 83 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKA-----ADRL-----------------------PNTNFG 83 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHH-----HHHS-----------------------TTSEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHH-----HHhC-----------------------CCcEEE
Confidence 36789999999999999877765 234899999999988432 2221 234555
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|....+ ...+||+|
T Consensus 84 ~~d~~~~~----------------------------------------------------------------~~~~fD~v 99 (259)
T 2p35_A 84 KADLATWK----------------------------------------------------------------PAQKADLL 99 (259)
T ss_dssp ECCTTTCC----------------------------------------------------------------CSSCEEEE
T ss_pred ECChhhcC----------------------------------------------------------------ccCCcCEE
Confidence 45543211 23589999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
+++.++++......+++.+.++|+ |+|++++..
T Consensus 100 ~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~ 132 (259)
T 2p35_A 100 YANAVFQWVPDHLAVLSQLMDQLE-SGGVLAVQM 132 (259)
T ss_dssp EEESCGGGSTTHHHHHHHHGGGEE-EEEEEEEEE
T ss_pred EEeCchhhCCCHHHHHHHHHHhcC-CCeEEEEEe
Confidence 999999999999999999999999 899998875
No 68
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.24 E-value=4.8e-11 Score=103.76 Aligned_cols=103 Identities=16% Similarity=0.163 Sum_probs=79.8
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
-++.+|||+|||+|..++.++..+. +|+++|.++.+++. .+.+. .. ..+++++..
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~-----a~~~~-~~------------------~~~~~~~~~ 92 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEV-----FRQKI-AG------------------VDRKVQVVQ 92 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHH-----HHHHT-TT------------------SCTTEEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHH-----HHHHh-hc------------------cCCceEEEE
Confidence 3678999999999999988887776 89999999998843 23332 00 123566766
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|+...+ ...++||+|+
T Consensus 93 ~d~~~~~---------------------------------------------------------------~~~~~fD~v~ 109 (263)
T 2yqz_A 93 ADARAIP---------------------------------------------------------------LPDESVHGVI 109 (263)
T ss_dssp SCTTSCC---------------------------------------------------------------SCTTCEEEEE
T ss_pred cccccCC---------------------------------------------------------------CCCCCeeEEE
Confidence 6654321 1345899999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEE
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLA 225 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va 225 (269)
++.++++....+.+++.+.++|+ |+|.+++.
T Consensus 110 ~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~~~ 140 (263)
T 2yqz_A 110 VVHLWHLVPDWPKVLAEAIRVLK-PGGALLEG 140 (263)
T ss_dssp EESCGGGCTTHHHHHHHHHHHEE-EEEEEEEE
T ss_pred ECCchhhcCCHHHHHHHHHHHCC-CCcEEEEE
Confidence 99999999999999999999999 89988876
No 69
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.24 E-value=1.6e-10 Score=102.30 Aligned_cols=98 Identities=22% Similarity=0.244 Sum_probs=75.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+.+|||+|||+|.....++..+. +|+++|.++.+++.+ +.+. +++.+..+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a-----~~~~-----------------------~~~~~~~~ 107 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKA-----RQNY-----------------------PHLHFDVA 107 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHH-----HHHC-----------------------TTSCEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHH-----HhhC-----------------------CCCEEEEC
Confidence 678999999999999988887665 899999999988432 2111 12344444
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ..++||+|++
T Consensus 108 d~~~~~----------------------------------------------------------------~~~~fD~v~~ 123 (279)
T 3ccf_A 108 DARNFR----------------------------------------------------------------VDKPLDAVFS 123 (279)
T ss_dssp CTTTCC----------------------------------------------------------------CSSCEEEEEE
T ss_pred ChhhCC----------------------------------------------------------------cCCCcCEEEE
Confidence 433211 1358999999
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
+.++++....+.+++.+.++|+ |+|++++..
T Consensus 124 ~~~l~~~~d~~~~l~~~~~~Lk-pgG~l~~~~ 154 (279)
T 3ccf_A 124 NAMLHWVKEPEAAIASIHQALK-SGGRFVAEF 154 (279)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred cchhhhCcCHHHHHHHHHHhcC-CCcEEEEEe
Confidence 9999998899999999999999 899988864
No 70
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.24 E-value=3.5e-11 Score=97.82 Aligned_cols=127 Identities=21% Similarity=0.269 Sum_probs=84.5
Q ss_pred eccHHHHHHHHhhhhhcCCCCC-CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhc
Q 024311 13 WESSIDLVNVLKHEIRDGQLSF-RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQS 91 (269)
Q Consensus 13 W~as~~La~~L~~~~~~~~~~~-~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~ 91 (269)
.+....+.+.+..... ..+ ++++|||+|||+|..++.++..++ +|++.|+++.+++ ..+.|+..+.
T Consensus 21 ~~~~~~~~~~~~~~~~---~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~-----~a~~~~~~~~---- 87 (171)
T 1ws6_A 21 RPSPVRLRKALFDYLR---LRYPRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVR-----LLKENVRRTG---- 87 (171)
T ss_dssp CCCCHHHHHHHHHHHH---HHCTTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHH-----HHHHHHHHHT----
T ss_pred CCCHHHHHHHHHHHHH---hhccCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHH-----HHHHHHHHcC----
Confidence 4455555655554432 112 678999999999999999998888 4999999999984 4455554331
Q ss_pred cCCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCccccccccc
Q 024311 92 RQPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLS 171 (269)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (269)
. +++++.+|+.+....
T Consensus 88 -------------~--~~~~~~~d~~~~~~~------------------------------------------------- 103 (171)
T 1ws6_A 88 -------------L--GARVVALPVEVFLPE------------------------------------------------- 103 (171)
T ss_dssp -------------C--CCEEECSCHHHHHHH-------------------------------------------------
T ss_pred -------------C--ceEEEeccHHHHHHh-------------------------------------------------
Confidence 1 455555554431000
Q ss_pred CchhhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHH--HhcCCCCeEEEEEEccc
Q 024311 172 GSRAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIK--KCLRPPYGVVYLATKKN 229 (269)
Q Consensus 172 gs~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~--~~L~~p~g~~~va~k~~ 229 (269)
+ .....+||+|++.. .|. ...+.+++.+. ++|+ |+|++++.+...
T Consensus 104 ----~------~~~~~~~D~i~~~~-~~~-~~~~~~~~~~~~~~~L~-~gG~~~~~~~~~ 150 (171)
T 1ws6_A 104 ----A------KAQGERFTVAFMAP-PYA-MDLAALFGELLASGLVE-AGGLYVLQHPKD 150 (171)
T ss_dssp ----H------HHTTCCEEEEEECC-CTT-SCTTHHHHHHHHHTCEE-EEEEEEEEEETT
T ss_pred ----h------hccCCceEEEEECC-CCc-hhHHHHHHHHHhhcccC-CCcEEEEEeCCc
Confidence 0 01234899999854 455 66777888887 8888 899999887653
No 71
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.24 E-value=2.1e-10 Score=98.96 Aligned_cols=132 Identities=17% Similarity=0.124 Sum_probs=85.0
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
..+.+|||+|||+|..++.++.. | ..+|++.|+++.+++ .+..|...+ .++.+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~-----~~~~~a~~~--------------------~~v~~ 130 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGR-----DLINLAKKR--------------------TNIIP 130 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHH-----HHHHHHHHC--------------------TTEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHH-----HHHHHhhcc--------------------CCeEE
Confidence 35789999999999999887765 3 358999999998873 333333221 24566
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
..+|..+...++ ....+||+
T Consensus 131 ~~~d~~~~~~~~------------------------------------------------------------~~~~~~D~ 150 (233)
T 2ipx_A 131 VIEDARHPHKYR------------------------------------------------------------MLIAMVDV 150 (233)
T ss_dssp ECSCTTCGGGGG------------------------------------------------------------GGCCCEEE
T ss_pred EEcccCChhhhc------------------------------------------------------------ccCCcEEE
Confidence 666654321000 12358999
Q ss_pred EEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHH-H---HHHhhhcCceeEE
Q 024311 192 ILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARH-L---RSLVDEEGIFGAH 253 (269)
Q Consensus 192 IlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~-F---~~~~~~~g~~~~~ 253 (269)
|++ |.. .+.....++..+.++|+ |+|++++..+............ | ++.+++.||-..+
T Consensus 151 V~~-~~~-~~~~~~~~~~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 213 (233)
T 2ipx_A 151 IFA-DVA-QPDQTRIVALNAHTFLR-NGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQE 213 (233)
T ss_dssp EEE-CCC-CTTHHHHHHHHHHHHEE-EEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEE
T ss_pred EEE-cCC-CccHHHHHHHHHHHHcC-CCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEE
Confidence 997 555 45555667888889999 8999999866532111111111 2 6788889974444
No 72
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.23 E-value=3.6e-11 Score=106.80 Aligned_cols=111 Identities=19% Similarity=0.296 Sum_probs=78.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+.+|||||||+|..++.++..|+ +|+++|+++.+++.+ +.|........ ...++.+..+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a-----~~~~~~~~~~~--------------~~~~~~~~~~ 116 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYA-----LKERWNRRKEP--------------AFDKWVIEEA 116 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHH-----HHHHHHTTTSH--------------HHHTCEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHH-----HHhhhhccccc--------------ccceeeEeec
Confidence 578999999999999999888888 999999999998543 33332110000 0012334344
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|+...+. +| ...++||+|++
T Consensus 117 d~~~~~~-----------------------------------------------------~~-------~~~~~fD~V~~ 136 (293)
T 3thr_A 117 NWLTLDK-----------------------------------------------------DV-------PAGDGFDAVIC 136 (293)
T ss_dssp CGGGHHH-----------------------------------------------------HS-------CCTTCEEEEEE
T ss_pred ChhhCcc-----------------------------------------------------cc-------ccCCCeEEEEE
Confidence 4333210 00 13468999999
Q ss_pred e-ccccccCC-------HHHHHHHHHHhcCCCCeEEEEEE
Q 024311 195 T-EIPYSVTS-------LKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 195 s-D~iY~~~~-------~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
. +++++... ...+++.+.++|+ |+|++++..
T Consensus 137 ~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 175 (293)
T 3thr_A 137 LGNSFAHLPDSKGDQSEHRLALKNIASMVR-PGGLLVIDH 175 (293)
T ss_dssp CTTCGGGSCCSSSSSHHHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred cChHHhhcCccccCHHHHHHHHHHHHHHcC-CCeEEEEEe
Confidence 8 99988888 8999999999999 899998764
No 73
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.23 E-value=6.4e-11 Score=100.72 Aligned_cols=51 Identities=24% Similarity=0.185 Sum_probs=40.8
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHh
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~ 74 (269)
.|.+|+.... .-++.+|||+|||+|...+.++..|. +|++.|+++.+++.+
T Consensus 10 ~l~~~~~~l~-----~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a 60 (203)
T 1pjz_A 10 DLQQYWSSLN-----VVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERY 60 (203)
T ss_dssp HHHHHHHHHC-----CCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHH
T ss_pred HHHHHHHhcc-----cCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 4666665431 23678999999999999998888887 899999999999543
No 74
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.23 E-value=9.1e-11 Score=105.53 Aligned_cols=135 Identities=16% Similarity=0.113 Sum_probs=93.2
Q ss_pred CCCCEEEEEcCCCCHHHHHHH--HcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFAC--LKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa--~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
..+.+|||+|||+|..++.++ .....+|+++|+++.+++. .+.|.... ....++++
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~-----a~~~~~~~-----------------~~~~~v~~ 174 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDG-----ATRLAAGH-----------------ALAGQITL 174 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHH-----HHHHHTTS-----------------TTGGGEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHH-----HHHHHHhc-----------------CCCCceEE
Confidence 367899999999999888764 3444599999999999843 44444211 01234666
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
+.+|..+.+ .. ++||+
T Consensus 175 ~~~d~~~~~---------------------------------------------------------------~~-~~fD~ 190 (305)
T 3ocj_A 175 HRQDAWKLD---------------------------------------------------------------TR-EGYDL 190 (305)
T ss_dssp EECCGGGCC---------------------------------------------------------------CC-SCEEE
T ss_pred EECchhcCC---------------------------------------------------------------cc-CCeEE
Confidence 666644321 12 68999
Q ss_pred EEEeccccccCCHHH---HHHHHHHhcCCCCeEEEEEEccc-------c-c---c----------------------cCc
Q 024311 192 ILLTEIPYSVTSLKK---LYLLIKKCLRPPYGVVYLATKKN-------Y-V---G----------------------FNN 235 (269)
Q Consensus 192 IlasD~iY~~~~~~~---L~~~l~~~L~~p~g~~~va~k~~-------~-f---g----------------------~~~ 235 (269)
|++..++++...... +++.+.++|+ |+|++++..-.. + + + .-.
T Consensus 191 v~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (305)
T 3ocj_A 191 LTSNGLNIYEPDDARVTELYRRFWQALK-PGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALR 269 (305)
T ss_dssp EECCSSGGGCCCHHHHHHHHHHHHHHEE-EEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCC
T ss_pred EEECChhhhcCCHHHHHHHHHHHHHhcC-CCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccC
Confidence 999999987666655 7899999999 899999875211 1 0 0 002
Q ss_pred chHHHHHHhhhcCceeEEEE
Q 024311 236 AARHLRSLVDEEGIFGAHLI 255 (269)
Q Consensus 236 ~~~~F~~~~~~~g~~~~~~~ 255 (269)
+..++.+.+++.||-..++.
T Consensus 270 ~~~~~~~~l~~aGF~~v~~~ 289 (305)
T 3ocj_A 270 THAQTRAQLEEAGFTDLRFE 289 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEE
Confidence 57788999999998655553
No 75
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.22 E-value=1.9e-10 Score=99.41 Aligned_cols=127 Identities=13% Similarity=0.138 Sum_probs=89.0
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
-.+++|||+|||+|..+..++..++ +|+++|+++.+++.+ +.+ +++..
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a-----~~~--------------------------~~~~~ 87 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFC-----EGK--------------------------FNVVK 87 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHH-----HTT--------------------------SEEEC
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHH-----Hhh--------------------------cceee
Confidence 3678999999999999988888877 799999999887432 111 22222
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+.. .....++||+|+
T Consensus 88 ~d~~~~~-------------------------------------------------------------~~~~~~~fD~i~ 106 (240)
T 3dli_A 88 SDAIEYL-------------------------------------------------------------KSLPDKYLDGVM 106 (240)
T ss_dssp SCHHHHH-------------------------------------------------------------HTSCTTCBSEEE
T ss_pred ccHHHHh-------------------------------------------------------------hhcCCCCeeEEE
Confidence 2211100 002346899999
Q ss_pred EeccccccC--CHHHHHHHHHHhcCCCCeEEEEEEcccc---------cc----cCcchHHHHHHhhhcCceeEEE
Q 024311 194 LTEIPYSVT--SLKKLYLLIKKCLRPPYGVVYLATKKNY---------VG----FNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 194 asD~iY~~~--~~~~L~~~l~~~L~~p~g~~~va~k~~~---------fg----~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
+..++++.. ....+++.+.++|+ |+|++++...... .. ..-....+...+++.||-..++
T Consensus 107 ~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 107 ISHFVEHLDPERLFELLSLCYSKMK-YSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHHBC-TTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred ECCchhhCCcHHHHHHHHHHHHHcC-CCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 999999988 66999999999999 8999888753211 00 0113577888999999854444
No 76
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.22 E-value=7.9e-11 Score=104.47 Aligned_cols=102 Identities=19% Similarity=0.211 Sum_probs=77.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..++.++..|. +|+++|+++.+++. .+.|...+. .++++..+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~-----a~~~~~~~~-------------------~~~~~~~~ 174 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAF-----LNETKEKEN-------------------LNISTALY 174 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHH-----HHHHHHHTT-------------------CCEEEEEC
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHH-----HHHHHHHcC-------------------CceEEEEe
Confidence 688999999999999999998887 89999999999843 444443220 14555555
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ..++||+|++
T Consensus 175 d~~~~~----------------------------------------------------------------~~~~fD~i~~ 190 (286)
T 3m70_A 175 DINAAN----------------------------------------------------------------IQENYDFIVS 190 (286)
T ss_dssp CGGGCC----------------------------------------------------------------CCSCEEEEEE
T ss_pred cccccc----------------------------------------------------------------ccCCccEEEE
Confidence 433211 2458999999
Q ss_pred ecccccc--CCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 195 TEIPYSV--TSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 195 sD~iY~~--~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
+.++++. ...+.+++.+.++|+ |+|++++.+
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~ 223 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTN-VGGYNLIVA 223 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred ccchhhCCHHHHHHHHHHHHHhcC-CCcEEEEEE
Confidence 9999855 567799999999998 899977654
No 77
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.22 E-value=5.9e-10 Score=94.92 Aligned_cols=130 Identities=13% Similarity=0.047 Sum_probs=88.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||||||+|..++.++... ..+|+++|+++.+++. .+.|+..+. + .+++++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~-----a~~~~~~~~-----------------~-~~v~~~~ 97 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSY-----ALDKVLEVG-----------------V-PNIKLLW 97 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHH-----HHHHHHHHC-----------------C-SSEEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHH-----HHHHHHHcC-----------------C-CCEEEEe
Confidence 47799999999999998877764 3489999999999843 444543320 1 3677777
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|+...+.. ...++||+|+
T Consensus 98 ~d~~~~~~~-------------------------------------------------------------~~~~~~D~i~ 116 (214)
T 1yzh_A 98 VDGSDLTDY-------------------------------------------------------------FEDGEIDRLY 116 (214)
T ss_dssp CCSSCGGGT-------------------------------------------------------------SCTTCCSEEE
T ss_pred CCHHHHHhh-------------------------------------------------------------cCCCCCCEEE
Confidence 776653210 1235799999
Q ss_pred EeccccccC--------CHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEE
Q 024311 194 LTEIPYSVT--------SLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 194 asD~iY~~~--------~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
+.-..-++. ..+.+++.+.++|+ |+|++++.+.... -.....+.+++.|+....+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~-----~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 117 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILP-ENGEIHFKTDNRG-----LFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHSC-TTCEEEEEESCHH-----HHHHHHHHHHHHTCEEEEE
T ss_pred EECCCCccccchhhhccCCHHHHHHHHHHcC-CCcEEEEEeCCHH-----HHHHHHHHHHHCCCeeeec
Confidence 863322111 34689999999998 8999999874321 1345667788888754444
No 78
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.22 E-value=4e-10 Score=93.17 Aligned_cols=51 Identities=25% Similarity=0.302 Sum_probs=40.5
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHH
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
+.+..|++++... ..++.+|||+|||+|..++.++..+ +|+++|+++.+++
T Consensus 8 ~~~~~l~~~l~~~------~~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~ 58 (170)
T 3q87_B 8 EDTYTLMDALERE------GLEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALE 58 (170)
T ss_dssp HHHHHHHHHHHHH------TCCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHH
T ss_pred ccHHHHHHHHHhh------cCCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHh
Confidence 3455666665442 2357799999999999999999887 9999999999883
No 79
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.22 E-value=6.7e-10 Score=98.52 Aligned_cols=145 Identities=12% Similarity=0.144 Sum_probs=96.6
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHH-cCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhcc
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACL-KGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSR 92 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~-~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~ 92 (269)
+.+..+++++.+... .++.+|||+|||+|..++.++. .+..+|+++|+++.+++ ..+.|...+.
T Consensus 93 ~~te~l~~~~l~~~~-----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~-----~a~~n~~~~~----- 157 (276)
T 2b3t_A 93 PDTECLVEQALARLP-----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVS-----LAQRNAQHLA----- 157 (276)
T ss_dssp TTHHHHHHHHHHHSC-----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHH-----HHHHHHHHHT-----
T ss_pred chHHHHHHHHHHhcc-----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHH-----HHHHHHHHcC-----
Confidence 456677777766531 3567999999999999988775 34459999999999984 3455554321
Q ss_pred CCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccC
Q 024311 93 QPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSG 172 (269)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~g 172 (269)
. +++++..+|+...
T Consensus 158 ------------~-~~v~~~~~d~~~~----------------------------------------------------- 171 (276)
T 2b3t_A 158 ------------I-KNIHILQSDWFSA----------------------------------------------------- 171 (276)
T ss_dssp ------------C-CSEEEECCSTTGG-----------------------------------------------------
T ss_pred ------------C-CceEEEEcchhhh-----------------------------------------------------
Confidence 1 2467766665431
Q ss_pred chhhhhhcccccCCCCccEEEEe-------------cccc-cc-----------CCHHHHHHHHHHhcCCCCeEEEEEEc
Q 024311 173 SRAWERASEADQGEGGYDVILLT-------------EIPY-SV-----------TSLKKLYLLIKKCLRPPYGVVYLATK 227 (269)
Q Consensus 173 s~~W~~~~~~~~~~~~fDlIlas-------------D~iY-~~-----------~~~~~L~~~l~~~L~~p~g~~~va~k 227 (269)
...++||+|++. ++++ .| ..+..+++.+.++|+ |+|++++...
T Consensus 172 -----------~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 239 (276)
T 2b3t_A 172 -----------LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALV-SGGFLLLEHG 239 (276)
T ss_dssp -----------GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEE-EEEEEEEECC
T ss_pred -----------cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcC-CCCEEEEEEC
Confidence 013479999985 2222 11 234677888888998 8999888643
Q ss_pred ccccccCcchHHHHHHhhhcCceeEEEEee
Q 024311 228 KNYVGFNNAARHLRSLVDEEGIFGAHLIKE 257 (269)
Q Consensus 228 ~~~fg~~~~~~~F~~~~~~~g~~~~~~~~~ 257 (269)
. ....++.+.+++.||...++..+
T Consensus 240 ~------~~~~~~~~~l~~~Gf~~v~~~~d 263 (276)
T 2b3t_A 240 W------QQGEAVRQAFILAGYHDVETCRD 263 (276)
T ss_dssp S------SCHHHHHHHHHHTTCTTCCEEEC
T ss_pred c------hHHHHHHHHHHHCCCcEEEEEec
Confidence 2 23567888888899754554433
No 80
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.21 E-value=8.3e-11 Score=98.93 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=73.3
Q ss_pred CCCEEEEEcCCCCHHHH-HHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGI-FACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl-~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||+|||+|...+ .++..+. +|++.|.++.+++. .+.+...+ ..++++..
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~-----a~~~~~~~-------------------~~~~~~~~ 77 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKK-----AENFSREN-------------------NFKLNISK 77 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHH-----HHHHHHHH-------------------TCCCCEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHH-----HHHHHHhc-------------------CCceEEEE
Confidence 57899999999998753 4455565 89999999999854 33333221 01344444
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|....+ ...++||+|+
T Consensus 78 ~d~~~~~---------------------------------------------------------------~~~~~fD~v~ 94 (209)
T 2p8j_A 78 GDIRKLP---------------------------------------------------------------FKDESMSFVY 94 (209)
T ss_dssp CCTTSCC---------------------------------------------------------------SCTTCEEEEE
T ss_pred CchhhCC---------------------------------------------------------------CCCCceeEEE
Confidence 4443221 1345899999
Q ss_pred Eecccccc--CCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 194 LTEIPYSV--TSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 194 asD~iY~~--~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
+..++++. .....+++.+.++|+ |+|++++..
T Consensus 95 ~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 128 (209)
T 2p8j_A 95 SYGTIFHMRKNDVKEAIDEIKRVLK-PGGLACINF 128 (209)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EcChHHhCCHHHHHHHHHHHHHHcC-CCcEEEEEE
Confidence 99999887 677889999999999 899988864
No 81
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.21 E-value=8.9e-11 Score=108.07 Aligned_cols=104 Identities=26% Similarity=0.333 Sum_probs=76.0
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
..++++|||+|||+|..++.++..|+.+|++.|.++ +++. .+.|+..+. ...+++++
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~-----a~~~~~~~~-----------------~~~~i~~~ 118 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQ-----AMDIIRLNK-----------------LEDTITLI 118 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHH-----HHHHHHHTT-----------------CTTTEEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHH-----HHHHHHHcC-----------------CCCcEEEE
Confidence 457889999999999999999998888999999996 7743 344443321 22356666
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+.+ ...++||+|
T Consensus 119 ~~d~~~~~---------------------------------------------------------------~~~~~~D~I 135 (340)
T 2fyt_A 119 KGKIEEVH---------------------------------------------------------------LPVEKVDVI 135 (340)
T ss_dssp ESCTTTSC---------------------------------------------------------------CSCSCEEEE
T ss_pred EeeHHHhc---------------------------------------------------------------CCCCcEEEE
Confidence 66544321 123589999
Q ss_pred EEec---cccccCCHHHHHHHHHHhcCCCCeEEE
Q 024311 193 LLTE---IPYSVTSLKKLYLLIKKCLRPPYGVVY 223 (269)
Q Consensus 193 lasD---~iY~~~~~~~L~~~l~~~L~~p~g~~~ 223 (269)
++.. .+.+....+.++..+.++|+ |+|+++
T Consensus 136 vs~~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~li 168 (340)
T 2fyt_A 136 ISEWMGYFLLFESMLDSVLYAKNKYLA-KGGSVY 168 (340)
T ss_dssp EECCCBTTBTTTCHHHHHHHHHHHHEE-EEEEEE
T ss_pred EEcCchhhccCHHHHHHHHHHHHhhcC-CCcEEE
Confidence 9876 35556677888999999999 889876
No 82
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.21 E-value=2e-10 Score=98.42 Aligned_cols=38 Identities=16% Similarity=0.192 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
++.+|||+|||+|..+..++..++ +|+++|.++.+++.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~ 77 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTH 77 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHH
T ss_pred CCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHH
Confidence 578999999999999988887776 89999999998844
No 83
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.20 E-value=6.9e-11 Score=101.71 Aligned_cols=116 Identities=17% Similarity=0.134 Sum_probs=83.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..++.++..++ +|+++|+++.+++.+ +.|. +++++..+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a-----~~~~-----------------------~~~~~~~~ 98 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLA-----RANA-----------------------PHADVYEW 98 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHH-----HHHC-----------------------TTSEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHH-----HHhC-----------------------CCceEEEc
Confidence 678999999999999999888876 899999999988442 2221 24566666
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccC-CCCccEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQG-EGGYDVIL 193 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~-~~~fDlIl 193 (269)
|+.+.. + .. .++||+|+
T Consensus 99 d~~~~~--------------------------------------------------~------------~~~~~~fD~v~ 116 (226)
T 3m33_A 99 NGKGEL--------------------------------------------------P------------AGLGAPFGLIV 116 (226)
T ss_dssp CSCSSC--------------------------------------------------C------------TTCCCCEEEEE
T ss_pred chhhcc--------------------------------------------------C------------CcCCCCEEEEE
Confidence 664210 0 12 46899999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEE
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
++ .....+++.+.++|+ |+|+++... .......+.+.+++.|+...++
T Consensus 117 ~~------~~~~~~l~~~~~~Lk-pgG~l~~~~------~~~~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 117 SR------RGPTSVILRLPELAA-PDAHFLYVG------PRLNVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp EE------SCCSGGGGGHHHHEE-EEEEEEEEE------SSSCCTHHHHHHHHTTCEEEEE
T ss_pred eC------CCHHHHHHHHHHHcC-CCcEEEEeC------CcCCHHHHHHHHHHCCCeEEEE
Confidence 97 356677888889999 899888222 1235678899999999854443
No 84
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.20 E-value=8.2e-11 Score=109.72 Aligned_cols=109 Identities=23% Similarity=0.344 Sum_probs=79.1
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 32 LSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
...++++|||||||+|..++.++..|+++|+++|.+ .+++. .+.|+..+. ...++++
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~-----a~~~~~~~~-----------------~~~~v~~ 116 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADH-----ARALVKANN-----------------LDHIVEV 116 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHH-----HHHHHHHTT-----------------CTTTEEE
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHH-----HHHHHHHcC-----------------CCCeEEE
Confidence 356899999999999999999999998899999999 78743 344443321 2234666
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
+.+|..+.+ ..++||+
T Consensus 117 ~~~d~~~~~----------------------------------------------------------------~~~~~D~ 132 (376)
T 3r0q_C 117 IEGSVEDIS----------------------------------------------------------------LPEKVDV 132 (376)
T ss_dssp EESCGGGCC----------------------------------------------------------------CSSCEEE
T ss_pred EECchhhcC----------------------------------------------------------------cCCcceE
Confidence 666654321 2268999
Q ss_pred EEEecccccc---CCHHHHHHHHHHhcCCCCeEEEEEEcc
Q 024311 192 ILLTEIPYSV---TSLKKLYLLIKKCLRPPYGVVYLATKK 228 (269)
Q Consensus 192 IlasD~iY~~---~~~~~L~~~l~~~L~~p~g~~~va~k~ 228 (269)
|++.-+.|.. ...+.++..+.++|+ |+|++++....
T Consensus 133 Iv~~~~~~~l~~e~~~~~~l~~~~~~Lk-pgG~li~~~~~ 171 (376)
T 3r0q_C 133 IISEWMGYFLLRESMFDSVISARDRWLK-PTGVMYPSHAR 171 (376)
T ss_dssp EEECCCBTTBTTTCTHHHHHHHHHHHEE-EEEEEESSEEE
T ss_pred EEEcChhhcccchHHHHHHHHHHHhhCC-CCeEEEEecCe
Confidence 9984434443 668889999999999 89988765433
No 85
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.20 E-value=1.5e-10 Score=100.56 Aligned_cols=128 Identities=13% Similarity=0.118 Sum_probs=86.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||+|||+|.+++.++.. ...+|++.|.++.+++. ++.|...+. + .+++++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~-----a~~~~~~~~-----------------~-~~v~~~~ 126 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITF-----LEKLSEALQ-----------------L-ENTTFCH 126 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHH-----HHHHHHHHT-----------------C-SSEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHH-----HHHHHHHcC-----------------C-CCEEEEe
Confidence 6789999999999999887753 33589999999999844 344443320 1 2466666
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+.+. .....++||+|+
T Consensus 127 ~d~~~~~~------------------------------------------------------------~~~~~~~fD~V~ 146 (240)
T 1xdz_A 127 DRAETFGQ------------------------------------------------------------RKDVRESYDIVT 146 (240)
T ss_dssp SCHHHHTT------------------------------------------------------------CTTTTTCEEEEE
T ss_pred ccHHHhcc------------------------------------------------------------cccccCCccEEE
Confidence 65433210 000245899999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEE
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAH 253 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~ 253 (269)
+..+ ...+.+++.+.++|+ |+|++++...... .....++...+++.|+...+
T Consensus 147 ~~~~----~~~~~~l~~~~~~Lk-pgG~l~~~~g~~~---~~~~~~~~~~l~~~g~~~~~ 198 (240)
T 1xdz_A 147 ARAV----ARLSVLSELCLPLVK-KNGLFVALKAASA---EEELNAGKKAITTLGGELEN 198 (240)
T ss_dssp EECC----SCHHHHHHHHGGGEE-EEEEEEEEECC-C---HHHHHHHHHHHHHTTEEEEE
T ss_pred Eecc----CCHHHHHHHHHHhcC-CCCEEEEEeCCCc---hHHHHHHHHHHHHcCCeEeE
Confidence 8662 568899999999999 8999887633221 12456788888899974333
No 86
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.20 E-value=8.8e-10 Score=94.58 Aligned_cols=69 Identities=17% Similarity=0.098 Sum_probs=46.5
Q ss_pred CCCCCcc----CceeeccHH-HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHH
Q 024311 2 ISSKPDG----FLKCWESSI-DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIR 72 (269)
Q Consensus 2 ~~g~ye~----G~~vW~as~-~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~ 72 (269)
.+.+|.. ....|..-. .++..+..... ...-.|.+|||||||+|..+..++.. +..+|++.|+++.+++
T Consensus 21 ~~~~Y~~~~~~~y~~~~~~~~~l~~~~~~~l~--~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~ 95 (210)
T 1nt2_A 21 YGSHYGEKVFDGYREWVPWRSKLAAMILKGHR--LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFE 95 (210)
T ss_dssp CCCSSSCCEETTEEECCGGGCHHHHHHHTSCC--CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHH
T ss_pred CccccchhhhhhhhhcChhHHHHHHHHHhhcc--cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHH
Confidence 4567777 788886532 23333333211 11236789999999999988776654 3358999999999874
No 87
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.20 E-value=1.4e-10 Score=103.65 Aligned_cols=124 Identities=14% Similarity=0.168 Sum_probs=87.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.|.+|||+|||+|..++.++..++.+|++.|.++.+++. .+.|+..|. +..++++..+
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~-----a~~n~~~n~-----------------~~~~v~~~~~ 182 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKF-----LVENIHLNK-----------------VEDRMSAYNM 182 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHH-----HHHHHHHTT-----------------CTTTEEEECS
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHH-----HHHHHHHcC-----------------CCceEEEEEC
Confidence 488999999999999999999888689999999999844 455554431 1234666666
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|..+.. ...+||+|++
T Consensus 183 D~~~~~----------------------------------------------------------------~~~~fD~Vi~ 198 (278)
T 2frn_A 183 DNRDFP----------------------------------------------------------------GENIADRILM 198 (278)
T ss_dssp CTTTCC----------------------------------------------------------------CCSCEEEEEE
T ss_pred CHHHhc----------------------------------------------------------------ccCCccEEEE
Confidence 644321 1458999998
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEEccc-ccccCcchHHHHHHhhhcCc
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKN-YVGFNNAARHLRSLVDEEGI 249 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~-~fg~~~~~~~F~~~~~~~g~ 249 (269)
|..+ ....++..+.++|+ |+|++++.+... ..........+.+.+++.|+
T Consensus 199 -~~p~---~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~ 249 (278)
T 2frn_A 199 -GYVV---RTHEFIPKALSIAK-DGAIIHYHNTVPEKLMPREPFETFKRITKEYGY 249 (278)
T ss_dssp -CCCS---SGGGGHHHHHHHEE-EEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTC
T ss_pred -CCch---hHHHHHHHHHHHCC-CCeEEEEEEeeccccccccHHHHHHHHHHHcCC
Confidence 4433 34567778888998 899988865432 11123456778888888896
No 88
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.19 E-value=3.1e-11 Score=101.32 Aligned_cols=55 Identities=22% Similarity=0.234 Sum_probs=37.5
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHH
Q 024311 16 SIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRC 73 (269)
Q Consensus 16 s~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~ 73 (269)
+..+++++.+... ...++.+|||+|||+|..++.++..++ .+|+++|+++.+++.
T Consensus 14 ~~~~~~~~~~~l~---~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~ 69 (215)
T 4dzr_A 14 TEVLVEEAIRFLK---RMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAV 69 (215)
T ss_dssp HHHHHHHHHHHHT---TCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------
T ss_pred HHHHHHHHHHHhh---hcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHH
Confidence 4556666666542 124688999999999999998887753 389999999999844
No 89
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.19 E-value=1.9e-10 Score=96.51 Aligned_cols=124 Identities=17% Similarity=0.146 Sum_probs=84.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+ +|||+|||+|..++.++..+. +|+++|+++.+++. .+.+.... ..++.+..+
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~-----a~~~~~~~-------------------~~~~~~~~~ 83 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAK-----AKQLAQEK-------------------GVKITTVQS 83 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHH-----HHHHHHHH-------------------TCCEEEECC
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHH-----HHHHHHhc-------------------CCceEEEEc
Confidence 45 999999999999988888877 89999999999844 33443221 013455544
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ...++||+|++
T Consensus 84 d~~~~~---------------------------------------------------------------~~~~~fD~v~~ 100 (202)
T 2kw5_A 84 NLADFD---------------------------------------------------------------IVADAWEGIVS 100 (202)
T ss_dssp BTTTBS---------------------------------------------------------------CCTTTCSEEEE
T ss_pred ChhhcC---------------------------------------------------------------CCcCCccEEEE
Confidence 433211 13458999999
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEEccc---cc--cc------CcchHHHHHHhhhcCce
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKN---YV--GF------NNAARHLRSLVDEEGIF 250 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~---~f--g~------~~~~~~F~~~~~~~g~~ 250 (269)
+.+.+.......+++.+.++|+ |+|++++..... .+ +. .-+..++.+.++ ||-
T Consensus 101 ~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~ 164 (202)
T 2kw5_A 101 IFCHLPSSLRQQLYPKVYQGLK-PGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLN 164 (202)
T ss_dssp ECCCCCHHHHHHHHHHHHTTCC-SSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSC
T ss_pred EhhcCCHHHHHHHHHHHHHhcC-CCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--Cce
Confidence 7665545667888999999998 899988874211 00 10 124577778777 863
No 90
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.19 E-value=1.4e-10 Score=107.03 Aligned_cols=105 Identities=23% Similarity=0.300 Sum_probs=78.4
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
..++++|||+|||+|..++.++..|+.+|++.|.++ +++. .+.|...+. ...+++++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~-----a~~~~~~~~-----------------~~~~v~~~ 120 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDY-----AVKIVKANK-----------------LDHVVTII 120 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHH-----HHHHHHHTT-----------------CTTTEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHH-----HHHHHHHcC-----------------CCCcEEEE
Confidence 457899999999999999999999888999999995 7733 344443321 22357777
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|+.+.+ ...++||+|
T Consensus 121 ~~d~~~~~---------------------------------------------------------------~~~~~fD~I 137 (349)
T 3q7e_A 121 KGKVEEVE---------------------------------------------------------------LPVEKVDII 137 (349)
T ss_dssp ESCTTTCC---------------------------------------------------------------CSSSCEEEE
T ss_pred ECcHHHcc---------------------------------------------------------------CCCCceEEE
Confidence 77766531 124589999
Q ss_pred EEecc---ccccCCHHHHHHHHHHhcCCCCeEEEE
Q 024311 193 LLTEI---PYSVTSLKKLYLLIKKCLRPPYGVVYL 224 (269)
Q Consensus 193 lasD~---iY~~~~~~~L~~~l~~~L~~p~g~~~v 224 (269)
++.-+ +......+.++..+.++|+ |+|+++.
T Consensus 138 is~~~~~~l~~~~~~~~~l~~~~r~Lk-pgG~li~ 171 (349)
T 3q7e_A 138 ISEWMGYCLFYESMLNTVLHARDKWLA-PDGLIFP 171 (349)
T ss_dssp EECCCBBTBTBTCCHHHHHHHHHHHEE-EEEEEES
T ss_pred EEccccccccCchhHHHHHHHHHHhCC-CCCEEcc
Confidence 98554 4556889999999999998 8898754
No 91
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.19 E-value=3.1e-10 Score=101.45 Aligned_cols=106 Identities=19% Similarity=0.246 Sum_probs=73.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+.+|||||||+|..++.++..|. +|+++|+++.+++. .+.+...... .+..++++..+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~-----a~~~~~~~~~---------------~~~~~v~~~~~ 140 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAA-----FRKRLAEAPA---------------DVRDRCTLVQG 140 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHH-----HHHHHHTSCH---------------HHHTTEEEEEC
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHH-----HHHHHhhccc---------------ccccceEEEeC
Confidence 455999999999999998888876 89999999999854 3333321100 00024666666
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ..++||+|++
T Consensus 141 d~~~~~----------------------------------------------------------------~~~~fD~v~~ 156 (299)
T 3g2m_A 141 DMSAFA----------------------------------------------------------------LDKRFGTVVI 156 (299)
T ss_dssp BTTBCC----------------------------------------------------------------CSCCEEEEEE
T ss_pred chhcCC----------------------------------------------------------------cCCCcCEEEE
Confidence 654321 2458999986
Q ss_pred e-ccccccC--CHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 195 T-EIPYSVT--SLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 195 s-D~iY~~~--~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
+ .+++... ....+++.+.++|+ |+|++++..
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~ 190 (299)
T 3g2m_A 157 SSGSINELDEADRRGLYASVREHLE-PGGKFLLSL 190 (299)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CCcccccCCHHHHHHHHHHHHHHcC-CCcEEEEEe
Confidence 5 5555443 36788999999999 899988864
No 92
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.18 E-value=8.1e-10 Score=97.00 Aligned_cols=110 Identities=18% Similarity=0.246 Sum_probs=82.0
Q ss_pred HHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCC
Q 024311 17 IDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPES 96 (269)
Q Consensus 17 ~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~ 96 (269)
..+++.+.+... ...+.+|||+|||+|..++.++..++ +|+++|+++.+++.+.
T Consensus 20 ~~~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~--------------------- 73 (261)
T 3ege_A 20 IRIVNAIINLLN----LPKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAV--------------------- 73 (261)
T ss_dssp HHHHHHHHHHHC----CCTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSC---------------------
T ss_pred HHHHHHHHHHhC----CCCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHH---------------------
Confidence 356677766542 23678999999999999998888765 8999999998873210
Q ss_pred CCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhh
Q 024311 97 SLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAW 176 (269)
Q Consensus 97 ~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W 176 (269)
...+++|..+|....+
T Consensus 74 --------~~~~~~~~~~d~~~~~-------------------------------------------------------- 89 (261)
T 3ege_A 74 --------VHPQVEWFTGYAENLA-------------------------------------------------------- 89 (261)
T ss_dssp --------CCTTEEEECCCTTSCC--------------------------------------------------------
T ss_pred --------hccCCEEEECchhhCC--------------------------------------------------------
Confidence 0125666666654421
Q ss_pred hhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEE
Q 024311 177 ERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLA 225 (269)
Q Consensus 177 ~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va 225 (269)
...++||+|++..++++....+.+++.+.++|+ +|.+++.
T Consensus 90 -------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk--gG~~~~~ 129 (261)
T 3ege_A 90 -------LPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR--DGTIVLL 129 (261)
T ss_dssp -------SCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC--SSCEEEE
T ss_pred -------CCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC--CcEEEEE
Confidence 134689999999999999999999999999998 6655444
No 93
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.18 E-value=2.6e-10 Score=96.58 Aligned_cols=128 Identities=16% Similarity=0.150 Sum_probs=89.6
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.++.+|||+|||+|..+..++..| .+|+++|+++.+++.+ +.+. .++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~-----~~~~-------------------------~~~~~ 79 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQA-----KEKL-------------------------DHVVL 79 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHH-----HTTS-------------------------SEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHH-----HHhC-------------------------CcEEE
Confidence 367899999999999998888776 5999999999887432 1111 12222
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..... . ....++||+|+
T Consensus 80 ~d~~~~~-------------------------------------------------~------------~~~~~~fD~v~ 98 (230)
T 3cc8_A 80 GDIETMD-------------------------------------------------M------------PYEEEQFDCVI 98 (230)
T ss_dssp SCTTTCC-------------------------------------------------C------------CSCTTCEEEEE
T ss_pred cchhhcC-------------------------------------------------C------------CCCCCccCEEE
Confidence 3322210 0 01346899999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccc------------cc------------cCcchHHHHHHhhhcCc
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNY------------VG------------FNNAARHLRSLVDEEGI 249 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~------------fg------------~~~~~~~F~~~~~~~g~ 249 (269)
+++++++......+++.+.++|+ |+|.+++...... +. ..-+..++.+.+++.||
T Consensus 99 ~~~~l~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 177 (230)
T 3cc8_A 99 FGDVLEHLFDPWAVIEKVKPYIK-QNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGY 177 (230)
T ss_dssp EESCGGGSSCHHHHHHHTGGGEE-EEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTE
T ss_pred ECChhhhcCCHHHHHHHHHHHcC-CCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCC
Confidence 99999999999999999999998 8999988753210 00 01146788899999997
Q ss_pred eeEEE
Q 024311 250 FGAHL 254 (269)
Q Consensus 250 ~~~~~ 254 (269)
-..++
T Consensus 178 ~~~~~ 182 (230)
T 3cc8_A 178 SISKV 182 (230)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 44443
No 94
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.18 E-value=2.6e-10 Score=100.79 Aligned_cols=149 Identities=13% Similarity=0.197 Sum_probs=93.9
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhcc
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSR 92 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~ 92 (269)
--++.|+.++. ..++.+|||||||+|..++.++... ..+|++.|+++.+++. .+.|+..... +
T Consensus 23 ~D~~lL~~~~~--------~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~-----a~~n~~~~~~--~- 86 (260)
T 2ozv_A 23 MDAMLLASLVA--------DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEF-----ARRSLELPDN--A- 86 (260)
T ss_dssp CHHHHHHHTCC--------CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHH-----HHHHTTSGGG--T-
T ss_pred cHHHHHHHHhc--------ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHH-----HHHHHHhhhh--C-
Confidence 34556666542 2256799999999999999888765 3589999999999854 3444422000 0
Q ss_pred CCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccC
Q 024311 93 QPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSG 172 (269)
Q Consensus 93 ~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~g 172 (269)
.+..+++++.+|..+....
T Consensus 87 -----------~l~~~v~~~~~D~~~~~~~-------------------------------------------------- 105 (260)
T 2ozv_A 87 -----------AFSARIEVLEADVTLRAKA-------------------------------------------------- 105 (260)
T ss_dssp -----------TTGGGEEEEECCTTCCHHH--------------------------------------------------
T ss_pred -----------CCcceEEEEeCCHHHHhhh--------------------------------------------------
Confidence 0123567777776653100
Q ss_pred chhhhhhcccccCCCCccEEEEeccccccC-------------------CHHHHHHHHHHhcCCCCeEEEEEEccccccc
Q 024311 173 SRAWERASEADQGEGGYDVILLTEIPYSVT-------------------SLKKLYLLIKKCLRPPYGVVYLATKKNYVGF 233 (269)
Q Consensus 173 s~~W~~~~~~~~~~~~fDlIlasD~iY~~~-------------------~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~ 233 (269)
+. .......+||+|++. ..|... .++.+++.+.++|+ |+|++++.....
T Consensus 106 ---~~---~~~~~~~~fD~Vv~n-PPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~---- 173 (260)
T 2ozv_A 106 ---RV---EAGLPDEHFHHVIMN-PPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMV-SGGQLSLISRPQ---- 173 (260)
T ss_dssp ---HH---HTTCCTTCEEEEEEC-CCC---------------------CCHHHHHHHHHHHEE-EEEEEEEEECGG----
T ss_pred ---hh---hhccCCCCcCEEEEC-CCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcC-CCCEEEEEEcHH----
Confidence 00 000134589999984 444432 37788999999999 899998876543
Q ss_pred CcchHHHHHHhhhcCceeEEE
Q 024311 234 NNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 234 ~~~~~~F~~~~~~~g~~~~~~ 254 (269)
...++++.+++. +...++
T Consensus 174 --~~~~~~~~l~~~-~~~~~i 191 (260)
T 2ozv_A 174 --SVAEIIAACGSR-FGGLEI 191 (260)
T ss_dssp --GHHHHHHHHTTT-EEEEEE
T ss_pred --HHHHHHHHHHhc-CCceEE
Confidence 356788888874 543443
No 95
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.17 E-value=1.5e-10 Score=97.72 Aligned_cols=98 Identities=20% Similarity=0.202 Sum_probs=73.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|..+..+ +..+|+++|.++.+++.+ +.+. +++++..+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a-----~~~~-----------------------~~~~~~~~ 84 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVG-----RRRA-----------------------PEATWVRA 84 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHH-----HHHC-----------------------TTSEEECC
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHH-----HHhC-----------------------CCcEEEEc
Confidence 7889999999999877665 555899999999988432 2221 12344444
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ...++||+|++
T Consensus 85 d~~~~~---------------------------------------------------------------~~~~~fD~v~~ 101 (211)
T 2gs9_A 85 WGEALP---------------------------------------------------------------FPGESFDVVLL 101 (211)
T ss_dssp CTTSCC---------------------------------------------------------------SCSSCEEEEEE
T ss_pred ccccCC---------------------------------------------------------------CCCCcEEEEEE
Confidence 433211 13458999999
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEEc
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATK 227 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k 227 (269)
..++++......+++.+.++|+ |+|++++...
T Consensus 102 ~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~ 133 (211)
T 2gs9_A 102 FTTLEFVEDVERVLLEARRVLR-PGGALVVGVL 133 (211)
T ss_dssp ESCTTTCSCHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred cChhhhcCCHHHHHHHHHHHcC-CCCEEEEEec
Confidence 9999999999999999999999 8999988753
No 96
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.17 E-value=6.3e-10 Score=90.99 Aligned_cols=121 Identities=14% Similarity=0.040 Sum_probs=82.7
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
..+.+|||+|||+|..++.++.. +..+|+++|+++.+++. .+.|+..+. ...++ ++
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~-----a~~~~~~~~-----------------~~~~~-~~ 80 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRER-----ILSNAINLG-----------------VSDRI-AV 80 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHH-----HHHHHHTTT-----------------CTTSE-EE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHH-----HHHHHHHhC-----------------CCCCE-EE
Confidence 36779999999999999887765 34589999999999844 344443210 11234 43
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
..|..+. ++ ...++||+|
T Consensus 81 ~~d~~~~--------------------------------------------------~~------------~~~~~~D~i 98 (178)
T 3hm2_A 81 QQGAPRA--------------------------------------------------FD------------DVPDNPDVI 98 (178)
T ss_dssp ECCTTGG--------------------------------------------------GG------------GCCSCCSEE
T ss_pred ecchHhh--------------------------------------------------hh------------ccCCCCCEE
Confidence 3332210 00 122589999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCc
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGI 249 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~ 249 (269)
+.+.++++ ..+++.+.++|+ |+|++++..... .....+.+.+++.|+
T Consensus 99 ~~~~~~~~----~~~l~~~~~~L~-~gG~l~~~~~~~-----~~~~~~~~~~~~~~~ 145 (178)
T 3hm2_A 99 FIGGGLTA----PGVFAAAWKRLP-VGGRLVANAVTV-----ESEQMLWALRKQFGG 145 (178)
T ss_dssp EECC-TTC----TTHHHHHHHTCC-TTCEEEEEECSH-----HHHHHHHHHHHHHCC
T ss_pred EECCcccH----HHHHHHHHHhcC-CCCEEEEEeecc-----ccHHHHHHHHHHcCC
Confidence 99888876 678888889998 899998876543 256678888888875
No 97
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.17 E-value=7.3e-10 Score=95.08 Aligned_cols=37 Identities=30% Similarity=0.461 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
.+.+|||+|||+|..++.++.. .+|+++|+++.+++.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~ 69 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEI 69 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHH
Confidence 4689999999999999888776 499999999999844
No 98
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.16 E-value=2.1e-10 Score=101.07 Aligned_cols=129 Identities=18% Similarity=0.145 Sum_probs=88.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||+|||+|.+++.++.. +..+|++.|.++.+++ .++.|...+. + .+++++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~-----~a~~~~~~~~-----------------l-~~v~~~~ 136 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVA-----FVERAIEVLG-----------------L-KGARALW 136 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHH-----HHHHHHHHHT-----------------C-SSEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHH-----HHHHHHHHhC-----------------C-CceEEEE
Confidence 6789999999999999988765 4569999999999984 3455554321 1 2467766
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|.++.+. .....++||+|+
T Consensus 137 ~d~~~~~~------------------------------------------------------------~~~~~~~fD~I~ 156 (249)
T 3g89_A 137 GRAEVLAR------------------------------------------------------------EAGHREAYARAV 156 (249)
T ss_dssp CCHHHHTT------------------------------------------------------------STTTTTCEEEEE
T ss_pred CcHHHhhc------------------------------------------------------------ccccCCCceEEE
Confidence 66543210 001246899999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEE
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
+.-+ ..++.+++.+.++|+ |+|++++...... ...+.++...++..|+...++
T Consensus 157 s~a~----~~~~~ll~~~~~~Lk-pgG~l~~~~g~~~---~~e~~~~~~~l~~~G~~~~~~ 209 (249)
T 3g89_A 157 ARAV----APLCVLSELLLPFLE-VGGAAVAMKGPRV---EEELAPLPPALERLGGRLGEV 209 (249)
T ss_dssp EESS----CCHHHHHHHHGGGEE-EEEEEEEEECSCC---HHHHTTHHHHHHHHTEEEEEE
T ss_pred ECCc----CCHHHHHHHHHHHcC-CCeEEEEEeCCCc---HHHHHHHHHHHHHcCCeEEEE
Confidence 8543 467889999999999 8998776443221 235677888888889754443
No 99
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.16 E-value=5.8e-10 Score=93.67 Aligned_cols=50 Identities=24% Similarity=0.294 Sum_probs=40.4
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
.+.++|.... ..+.+|||+|||+|..++.++..+..+|+++|+++.+++.
T Consensus 31 ~~~~~l~~~~------~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~ 80 (215)
T 2pxx_A 31 SFRALLEPEL------RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAA 80 (215)
T ss_dssp HHHHHHGGGC------CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHH
T ss_pred HHHHHHHHhc------CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHH
Confidence 4566665542 3677999999999999998888887689999999998843
No 100
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.15 E-value=8.3e-10 Score=92.31 Aligned_cols=39 Identities=26% Similarity=0.402 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc--CCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK--GAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~--ga~~Vv~tD~~~~vl~~ 73 (269)
.+.+|||+|||+|..++.++.. +..+|++.|+++.+++.
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~ 62 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIAN 62 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHH
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHH
Confidence 5789999999999999887765 33599999999999844
No 101
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.15 E-value=4.7e-10 Score=96.15 Aligned_cols=136 Identities=15% Similarity=0.087 Sum_probs=85.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||||||+|..++.++.. + ..+|+++|+++.+++. .+.|+..+. +..+++++
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~-----a~~~~~~~~-----------------~~~~v~~~ 115 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAI-----TQQMLNFAG-----------------LQDKVTIL 115 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHH-----HHHHHHHHT-----------------CGGGEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHH-----HHHHHHHcC-----------------CCCceEEE
Confidence 5789999999999999888863 2 3489999999999843 455554321 12357777
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+... .+. .....++||+|
T Consensus 116 ~~d~~~~l~-----------------------------------------------~~~----------~~~~~~~fD~V 138 (221)
T 3u81_A 116 NGASQDLIP-----------------------------------------------QLK----------KKYDVDTLDMV 138 (221)
T ss_dssp ESCHHHHGG-----------------------------------------------GTT----------TTSCCCCCSEE
T ss_pred ECCHHHHHH-----------------------------------------------HHH----------HhcCCCceEEE
Confidence 666433100 000 00123689999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEEEe
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHLIK 256 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~~~ 256 (269)
+..-..........++..+ ++|+ |+|++++..-.. .+...|++++++...+....+.
T Consensus 139 ~~d~~~~~~~~~~~~~~~~-~~Lk-pgG~lv~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~ 195 (221)
T 3u81_A 139 FLDHWKDRYLPDTLLLEKC-GLLR-KGTVLLADNVIV-----PGTPDFLAYVRGSSSFECTHYS 195 (221)
T ss_dssp EECSCGGGHHHHHHHHHHT-TCCC-TTCEEEESCCCC-----CCCHHHHHHHHHCTTEEEEEEE
T ss_pred EEcCCcccchHHHHHHHhc-cccC-CCeEEEEeCCCC-----cchHHHHHHHhhCCCceEEEcc
Confidence 9743332222222344444 7888 899887754332 3568999999988766666544
No 102
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.15 E-value=1e-09 Score=99.25 Aligned_cols=132 Identities=21% Similarity=0.211 Sum_probs=91.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||+|||+|..++.++.. +..+++++|++ .+++. .+.|+.... +..++++..
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~-----a~~~~~~~~-----------------~~~~v~~~~ 221 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEV-----AKENARIQG-----------------VASRYHTIA 221 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHH-----HHHHHHHHT-----------------CGGGEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHH-----HHHHHHhcC-----------------CCcceEEEe
Confidence 5689999999999998777765 23489999998 88843 444443220 123567766
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|....+ ....||+|+
T Consensus 222 ~d~~~~~----------------------------------------------------------------~~~~~D~v~ 237 (335)
T 2r3s_A 222 GSAFEVD----------------------------------------------------------------YGNDYDLVL 237 (335)
T ss_dssp SCTTTSC----------------------------------------------------------------CCSCEEEEE
T ss_pred cccccCC----------------------------------------------------------------CCCCCcEEE
Confidence 6644321 122499999
Q ss_pred Eecccccc--CCHHHHHHHHHHhcCCCCeEEEEEEcccc---------------------cccCcchHHHHHHhhhcCce
Q 024311 194 LTEIPYSV--TSLKKLYLLIKKCLRPPYGVVYLATKKNY---------------------VGFNNAARHLRSLVDEEGIF 250 (269)
Q Consensus 194 asD~iY~~--~~~~~L~~~l~~~L~~p~g~~~va~k~~~---------------------fg~~~~~~~F~~~~~~~g~~ 250 (269)
++.++++. +....+++.+.++|+ |+|+++|...... .+...+..++.+.+++.||-
T Consensus 238 ~~~~l~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~ 316 (335)
T 2r3s_A 238 LPNFLHHFDVATCEQLLRKIKTALA-VEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFS 316 (335)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCS
T ss_pred EcchhccCCHHHHHHHHHHHHHhCC-CCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCC
Confidence 99999987 445688999999998 8998887643211 11223578899999999986
Q ss_pred eEEE
Q 024311 251 GAHL 254 (269)
Q Consensus 251 ~~~~ 254 (269)
..++
T Consensus 317 ~~~~ 320 (335)
T 2r3s_A 317 HSQL 320 (335)
T ss_dssp EEEE
T ss_pred eeeE
Confidence 5555
No 103
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.15 E-value=1.5e-09 Score=95.26 Aligned_cols=109 Identities=20% Similarity=0.249 Sum_probs=77.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-CC-CeEEEEeCCHH------HHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCC
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-GA-GTVHFQDLSAE------TIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTL 105 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-ga-~~Vv~tD~~~~------vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~ 105 (269)
.++.+|||+|||+|..++.++.. |+ .+|+++|+++. +++ ..+.|+..+ ..
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~-----~a~~~~~~~-----------------~~ 99 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLG-----QAWNHLLAG-----------------PL 99 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHH-----HHHHHHHTS-----------------TT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHH-----HHHHHHHhc-----------------CC
Confidence 36889999999999999887766 43 58999999986 663 333443221 01
Q ss_pred CCeeeeecCC-CCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhccccc
Q 024311 106 APSVHFYAGD-WEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQ 184 (269)
Q Consensus 106 ~~~v~~~~~d-w~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~ 184 (269)
.+++++..+| ..... + ..
T Consensus 100 ~~~v~~~~~d~~~~~~-------------------------------------------------~------------~~ 118 (275)
T 3bkx_A 100 GDRLTVHFNTNLSDDL-------------------------------------------------G------------PI 118 (275)
T ss_dssp GGGEEEECSCCTTTCC-------------------------------------------------G------------GG
T ss_pred CCceEEEECChhhhcc-------------------------------------------------C------------CC
Confidence 2356666665 11100 0 01
Q ss_pred CCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 185 GEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 185 ~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
..++||+|++..++++......+.+.++++++ |+|++++..
T Consensus 119 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~-~gG~l~~~~ 159 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFASANALALLFKNMAA-VCDHVDVAE 159 (275)
T ss_dssp TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTT-TCSEEEEEE
T ss_pred CCCCEEEEEEccchhhCCCHHHHHHHHHHHhC-CCCEEEEEE
Confidence 34689999999999999999998888888776 899988863
No 104
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.14 E-value=2.9e-10 Score=103.95 Aligned_cols=103 Identities=21% Similarity=0.323 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.++++|||+|||+|..++.++..|+.+|+++|.++ +++. .+.|+..+. ...+++++.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~-----a~~~~~~~~-----------------~~~~i~~~~ 93 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEM-----AKELVELNG-----------------FSDKITLLR 93 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHH-----HHHHHHHTT-----------------CTTTEEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHH-----HHHHHHHcC-----------------CCCCEEEEE
Confidence 46889999999999999999998888999999994 6633 344443221 223566666
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+.+ ...++||+|+
T Consensus 94 ~d~~~~~---------------------------------------------------------------~~~~~~D~Iv 110 (328)
T 1g6q_1 94 GKLEDVH---------------------------------------------------------------LPFPKVDIII 110 (328)
T ss_dssp SCTTTSC---------------------------------------------------------------CSSSCEEEEE
T ss_pred Cchhhcc---------------------------------------------------------------CCCCcccEEE
Confidence 6544321 1235899999
Q ss_pred Eec---cccccCCHHHHHHHHHHhcCCCCeEEE
Q 024311 194 LTE---IPYSVTSLKKLYLLIKKCLRPPYGVVY 223 (269)
Q Consensus 194 asD---~iY~~~~~~~L~~~l~~~L~~p~g~~~ 223 (269)
+.- .+.+....+.++..++++|+ |+|+++
T Consensus 111 s~~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~li 142 (328)
T 1g6q_1 111 SEWMGYFLLYESMMDTVLYARDHYLV-EGGLIF 142 (328)
T ss_dssp ECCCBTTBSTTCCHHHHHHHHHHHEE-EEEEEE
T ss_pred EeCchhhcccHHHHHHHHHHHHhhcC-CCeEEE
Confidence 863 44456778889999999999 888876
No 105
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.13 E-value=7.5e-11 Score=102.02 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=34.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
.+.+|||+|||+|..++.++..+..+|+++|+++.+++.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~ 98 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQR 98 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHH
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHH
Confidence 577999999999999988887776689999999999854
No 106
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.12 E-value=4.1e-10 Score=97.34 Aligned_cols=107 Identities=16% Similarity=0.106 Sum_probs=79.7
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
..+.+|||+|||+|..++.++..+. +|+++|+++.+++. .+.|.. ..++++..
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~-----a~~~~~---------------------~~~~~~~~ 107 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEI-----AAKENT---------------------AANISYRL 107 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHH-----HHHHSC---------------------CTTEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHH-----HHHhCc---------------------ccCceEEE
Confidence 4678999999999999999988887 89999999998843 232220 12567777
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+.+... .| .....||+|+
T Consensus 108 ~d~~~~~~~~---------------------~~-------------------------------------~~~~~~d~v~ 129 (245)
T 3ggd_A 108 LDGLVPEQAA---------------------QI-------------------------------------HSEIGDANIY 129 (245)
T ss_dssp CCTTCHHHHH---------------------HH-------------------------------------HHHHCSCEEE
T ss_pred Cccccccccc---------------------cc-------------------------------------ccccCccEEE
Confidence 7766532100 00 0112599999
Q ss_pred EeccccccC--CHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 194 LTEIPYSVT--SLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 194 asD~iY~~~--~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
+..++++.. ....+++.+.++|+ |+|++++..
T Consensus 130 ~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~ 163 (245)
T 3ggd_A 130 MRTGFHHIPVEKRELLGQSLRILLG-KQGAMYLIE 163 (245)
T ss_dssp EESSSTTSCGGGHHHHHHHHHHHHT-TTCEEEEEE
T ss_pred EcchhhcCCHHHHHHHHHHHHHHcC-CCCEEEEEe
Confidence 999999988 78899999999999 899877764
No 107
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.12 E-value=4.1e-10 Score=100.24 Aligned_cols=68 Identities=16% Similarity=0.112 Sum_probs=49.6
Q ss_pred CCCccEEEEeccccc----cCCHHHHHHHHHHhcCCCCeEEEEEEc--cccccc--------CcchHHHHHHhhhcCcee
Q 024311 186 EGGYDVILLTEIPYS----VTSLKKLYLLIKKCLRPPYGVVYLATK--KNYVGF--------NNAARHLRSLVDEEGIFG 251 (269)
Q Consensus 186 ~~~fDlIlasD~iY~----~~~~~~L~~~l~~~L~~p~g~~~va~k--~~~fg~--------~~~~~~F~~~~~~~g~~~ 251 (269)
.++||+|+++.++++ ......+++.+.++|+ |+|++++... ..++.. .-+..++.+.+++.||-.
T Consensus 172 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lk-pGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~ 250 (289)
T 2g72_A 172 PLPADALVSAFCLEAVSPDLASFQRALDHITTLLR-PGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKV 250 (289)
T ss_dssp CSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcC-CCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeE
Confidence 457999999999988 5578889999999999 8999888631 111101 124678889999999754
Q ss_pred EEE
Q 024311 252 AHL 254 (269)
Q Consensus 252 ~~~ 254 (269)
.++
T Consensus 251 ~~~ 253 (289)
T 2g72_A 251 RDL 253 (289)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 108
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.11 E-value=8.7e-11 Score=102.38 Aligned_cols=105 Identities=18% Similarity=0.239 Sum_probs=73.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.|.+|||+|||+|.....++..++.+|+++|.++++++. .+.+... ...+++++.+
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~-----a~~~~~~-------------------~~~~~~~~~~ 115 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQR-----LRDWAPR-------------------QTHKVIPLKG 115 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHH-----HHHHGGG-------------------CSSEEEEEES
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHH-----HHHHHhh-------------------CCCceEEEee
Confidence 688999999999999988887766689999999999844 3333211 1245667777
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
||..... .....+||.|+.
T Consensus 116 ~a~~~~~-------------------------------------------------------------~~~~~~FD~i~~ 134 (236)
T 3orh_A 116 LWEDVAP-------------------------------------------------------------TLPDGHFDGILY 134 (236)
T ss_dssp CHHHHGG-------------------------------------------------------------GSCTTCEEEEEE
T ss_pred hHHhhcc-------------------------------------------------------------cccccCCceEEE
Confidence 7654310 023457998874
Q ss_pred -----eccccccCCHHHHHHHHHHhcCCCCeEEEEE
Q 024311 195 -----TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLA 225 (269)
Q Consensus 195 -----sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va 225 (269)
...+.+....+.+++.+.++|+ |+|++.+.
T Consensus 135 D~~~~~~~~~~~~~~~~~~~e~~rvLk-PGG~l~f~ 169 (236)
T 3orh_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLK-PGGVLTYC 169 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEE-EEEEEEEC
T ss_pred eeeecccchhhhcchhhhhhhhhheeC-CCCEEEEE
Confidence 3333444456778899999999 99988754
No 109
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.11 E-value=2.9e-10 Score=100.51 Aligned_cols=52 Identities=25% Similarity=0.202 Sum_probs=41.7
Q ss_pred HHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 17 IDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 17 ~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
..|.+|+..... ..++.+|||+|||+|...+.++..|. +|++.|+++.+++.
T Consensus 54 ~~l~~~~~~~~~----~~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~ 105 (252)
T 2gb4_A 54 QLLKKHLDTFLK----GQSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIRE 105 (252)
T ss_dssp HHHHHHHHHHHT----TCCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHH
T ss_pred HHHHHHHHHhcc----CCCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHH
Confidence 356777755421 12678999999999999999998988 89999999999854
No 110
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.10 E-value=2.4e-10 Score=107.00 Aligned_cols=126 Identities=19% Similarity=0.186 Sum_probs=85.3
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCC-eeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAP-SVHFY 112 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~ 112 (269)
..+++|||+|||+|..++.+|..|+++|++.|.++.+++ ..+.|+..|. +.. +++|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~-----~A~~N~~~n~-----------------~~~~~v~~~ 268 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRA-----LSLAHFEANH-----------------LDMANHQLV 268 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHH-----HHHHHHHHTT-----------------CCCTTEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHH-----HHHHHHHHcC-----------------CCccceEEE
Confidence 367899999999999999999888889999999999994 4455555431 122 56777
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+... .|. ....+||+|
T Consensus 269 ~~D~~~~l~-----------------------------------------------------~~~------~~~~~fD~I 289 (385)
T 2b78_A 269 VMDVFDYFK-----------------------------------------------------YAR------RHHLTYDII 289 (385)
T ss_dssp ESCHHHHHH-----------------------------------------------------HHH------HTTCCEEEE
T ss_pred ECCHHHHHH-----------------------------------------------------HHH------HhCCCccEE
Confidence 666443100 000 123589999
Q ss_pred EEecccccc----------CCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhh
Q 024311 193 LLTEIPYSV----------TSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDE 246 (269)
Q Consensus 193 lasD~iY~~----------~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~ 246 (269)
+. |..|.. ..+..++..+.++|+ |+|++++++....+ ..+.|.+.+++
T Consensus 290 i~-DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~-pgG~l~~~~~~~~~----~~~~~~~~i~~ 347 (385)
T 2b78_A 290 II-DPPSFARNKKEVFSVSKDYHKLIRQGLEILS-ENGLIIASTNAANM----TVSQFKKQIEK 347 (385)
T ss_dssp EE-CCCCC-----CCCCHHHHHHHHHHHHHHTEE-EEEEEEEEECCTTS----CHHHHHHHHHH
T ss_pred EE-CCCCCCCChhhHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCCCcC----CHHHHHHHHHH
Confidence 97 555531 223345666677888 99999999877654 35667666553
No 111
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.10 E-value=1.1e-09 Score=92.13 Aligned_cols=101 Identities=20% Similarity=0.312 Sum_probs=72.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
++.+|||+|||+|..++.++.. +..+|+++|.++.+++. .+.|...+. . .++++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~-----a~~~~~~~~-----------------~-~~v~~~~ 121 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRF-----LRQVQHELK-----------------L-ENIEPVQ 121 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHH-----HHHHHHHTT-----------------C-SSEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHH-----HHHHHHHcC-----------------C-CCeEEEe
Confidence 5789999999999999887764 34599999999999843 444543320 1 2366666
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|+...+ ..++||+|+
T Consensus 122 ~d~~~~~----------------------------------------------------------------~~~~~D~i~ 137 (207)
T 1jsx_A 122 SRVEEFP----------------------------------------------------------------SEPPFDGVI 137 (207)
T ss_dssp CCTTTSC----------------------------------------------------------------CCSCEEEEE
T ss_pred cchhhCC----------------------------------------------------------------ccCCcCEEE
Confidence 6654321 134899999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEEEc
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATK 227 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k 227 (269)
+.. ....+.+++.+.++|+ |+|.+++...
T Consensus 138 ~~~----~~~~~~~l~~~~~~L~-~gG~l~~~~~ 166 (207)
T 1jsx_A 138 SRA----FASLNDMVSWCHHLPG-EQGRFYALKG 166 (207)
T ss_dssp CSC----SSSHHHHHHHHTTSEE-EEEEEEEEES
T ss_pred Eec----cCCHHHHHHHHHHhcC-CCcEEEEEeC
Confidence 743 2567889999999998 8999888754
No 112
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.10 E-value=4.7e-10 Score=105.03 Aligned_cols=124 Identities=21% Similarity=0.256 Sum_probs=85.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCC-CCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTL-APSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~ 113 (269)
++++|||||||+|..++.++..|+.+|++.|+++.+++ ..+.|+..|. + ..+++++.
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~-----~a~~n~~~ng-----------------l~~~~v~~~~ 277 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALD-----IARQNVELNK-----------------LDLSKAEFVR 277 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHH-----HHHHHHHHTT-----------------CCGGGEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHH-----HHHHHHHHcC-----------------CCccceEEEE
Confidence 67899999999999999999988889999999999984 4455554431 1 12566766
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+... .+ .....+||+|+
T Consensus 278 ~D~~~~~~-----------------------------------------------------~~------~~~~~~fD~Ii 298 (396)
T 3c0k_A 278 DDVFKLLR-----------------------------------------------------TY------RDRGEKFDVIV 298 (396)
T ss_dssp SCHHHHHH-----------------------------------------------------HH------HHTTCCEEEEE
T ss_pred CCHHHHHH-----------------------------------------------------HH------HhcCCCCCEEE
Confidence 66443210 00 01235899999
Q ss_pred Eecccccc----------CCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhh
Q 024311 194 LTEIPYSV----------TSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVD 245 (269)
Q Consensus 194 asD~iY~~----------~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~ 245 (269)
+ |..|.. ..+..++..+.++|+ |+|++++++....+. .+.|.+.++
T Consensus 299 ~-dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~----~~~~~~~i~ 354 (396)
T 3c0k_A 299 M-DPPKFVENKSQLMGACRGYKDINMLAIQLLN-EGGILLTFSCSGLMT----SDLFQKIIA 354 (396)
T ss_dssp E-CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEE-EEEEEEEEECCTTCC----HHHHHHHHH
T ss_pred E-CCCCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCCCcCC----HHHHHHHHH
Confidence 8 655532 456677777788898 899999988765442 335554443
No 113
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.10 E-value=9.5e-10 Score=97.59 Aligned_cols=126 Identities=14% Similarity=0.217 Sum_probs=88.2
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc--CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK--GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~--ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
..+.+|||+|||+|..++.++.. +..+|++.|.++.+++ ..+.|+..+. -..++++
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~-----~a~~~~~~~~-----------------g~~~v~~ 166 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLK-----KAMDNLSEFY-----------------DIGNVRT 166 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHH-----HHHHHHHTTS-----------------CCTTEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHH-----HHHHHHHhcC-----------------CCCcEEE
Confidence 36789999999999999887765 2359999999999984 3444543210 0124556
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
..+|+.+. ...++||+
T Consensus 167 ~~~d~~~~----------------------------------------------------------------~~~~~fD~ 182 (275)
T 1yb2_A 167 SRSDIADF----------------------------------------------------------------ISDQMYDA 182 (275)
T ss_dssp ECSCTTTC----------------------------------------------------------------CCSCCEEE
T ss_pred EECchhcc----------------------------------------------------------------CcCCCccE
Confidence 55554321 12358999
Q ss_pred EEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEEEe
Q 024311 192 ILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHLIK 256 (269)
Q Consensus 192 IlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~~~ 256 (269)
|++ +......+++.+.++|+ |+|++++.+... .....+.+.+++.|+...++..
T Consensus 183 Vi~-----~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~-----~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 183 VIA-----DIPDPWNHVQKIASMMK-PGSVATFYLPNF-----DQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp EEE-----CCSCGGGSHHHHHHTEE-EEEEEEEEESSH-----HHHHHHHHHSGGGTEEEEEEEE
T ss_pred EEE-----cCcCHHHHHHHHHHHcC-CCCEEEEEeCCH-----HHHHHHHHHHHHCCCeEEEEEE
Confidence 998 34455678888999998 899999887653 2467888999999976555543
No 114
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.10 E-value=9.4e-10 Score=95.77 Aligned_cols=124 Identities=19% Similarity=0.202 Sum_probs=87.2
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
..+.+|||+|||+|..++.++.. + ..+|++.|+++++++. .+.|+..+. ...++++
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~-----a~~~~~~~~-----------------~~~~v~~ 149 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKL-----AWENIKWAG-----------------FDDRVTI 149 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHH-----HHHHHHHHT-----------------CTTTEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHH-----HHHHHHHcC-----------------CCCceEE
Confidence 46889999999999999888776 4 4599999999999844 445543321 1123566
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
..+|..+. ....+||+
T Consensus 150 ~~~d~~~~----------------------------------------------------------------~~~~~~D~ 165 (255)
T 3mb5_A 150 KLKDIYEG----------------------------------------------------------------IEEENVDH 165 (255)
T ss_dssp ECSCGGGC----------------------------------------------------------------CCCCSEEE
T ss_pred EECchhhc----------------------------------------------------------------cCCCCcCE
Confidence 55553321 12357999
Q ss_pred EEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcC--ceeEEE
Q 024311 192 ILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEG--IFGAHL 254 (269)
Q Consensus 192 IlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g--~~~~~~ 254 (269)
|++ ++.....+++.+.++|+ |+|++++..... ....++.+.+++.| |...++
T Consensus 166 v~~-----~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~-----~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 166 VIL-----DLPQPERVVEHAAKALK-PGGFFVAYTPCS-----NQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp EEE-----CSSCGGGGHHHHHHHEE-EEEEEEEEESSH-----HHHHHHHHHHHHTGGGBSCCEE
T ss_pred EEE-----CCCCHHHHHHHHHHHcC-CCCEEEEEECCH-----HHHHHHHHHHHHcCCCccccEE
Confidence 997 34455677888889998 899998876433 24678889999999 755555
No 115
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.09 E-value=1.4e-09 Score=93.91 Aligned_cols=132 Identities=15% Similarity=0.121 Sum_probs=82.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||+|||+|..++.++.. |..+|++.|+++.+++. ++.|... .+++.+..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~-----a~~~~~~--------------------~~~v~~~~ 128 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRE-----LLDACAE--------------------RENIIPIL 128 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHH-----HHHHTTT--------------------CTTEEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHH-----HHHHhhc--------------------CCCeEEEE
Confidence 6789999999999999887765 55699999999998843 3333211 13456655
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|...... .+ ....+||+|+
T Consensus 129 ~d~~~~~~-----------------------------------------------~~-------------~~~~~~D~v~ 148 (230)
T 1fbn_A 129 GDANKPQE-----------------------------------------------YA-------------NIVEKVDVIY 148 (230)
T ss_dssp CCTTCGGG-----------------------------------------------GT-------------TTSCCEEEEE
T ss_pred CCCCCccc-----------------------------------------------cc-------------ccCccEEEEE
Confidence 55443110 00 0125899999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcc----hHHHHHHhhhcCceeEEE
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNA----ARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~----~~~F~~~~~~~g~~~~~~ 254 (269)
.|+ ..+...+.+++.+.++|+ |+|++++..+......+.. ..+-+..+++.||-..++
T Consensus 149 -~~~-~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~l~~l~~~Gf~~~~~ 210 (230)
T 1fbn_A 149 -EDV-AQPNQAEILIKNAKWFLK-KGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDE 210 (230)
T ss_dssp -ECC-CSTTHHHHHHHHHHHHEE-EEEEEEEEEEGGGTCSSSCHHHHHHHHHHHHHHHTEEEEEE
T ss_pred -Eec-CChhHHHHHHHHHHHhCC-CCcEEEEEEecCCCCCCCCHHHhhHHHHHHHHHCCCEEEEE
Confidence 343 334445788999999999 8999998744322111111 112233778888743333
No 116
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.09 E-value=2.8e-09 Score=92.51 Aligned_cols=125 Identities=20% Similarity=0.201 Sum_probs=87.3
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHh-hhhhccCCCCCCCCCccCCCCeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQA-RERQSRQPESSLTPSRQTLAPSVH 110 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~-~~~~~~~~~~~~~~~~~~~~~~v~ 110 (269)
..+.+|||+|||+|..++.++.. + ..+|++.|.++.+++. .+.|+..+ . ..+++
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~-----a~~~~~~~~g------------------~~~v~ 151 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQ-----AERNVRAFWQ------------------VENVR 151 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHH-----HHHHHHHHCC------------------CCCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHH-----HHHHHHHhcC------------------CCCEE
Confidence 46789999999999999888776 4 3599999999999844 34444321 0 12455
Q ss_pred eecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCcc
Q 024311 111 FYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYD 190 (269)
Q Consensus 111 ~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fD 190 (269)
+..+|..+.+ ...++||
T Consensus 152 ~~~~d~~~~~---------------------------------------------------------------~~~~~~D 168 (258)
T 2pwy_A 152 FHLGKLEEAE---------------------------------------------------------------LEEAAYD 168 (258)
T ss_dssp EEESCGGGCC---------------------------------------------------------------CCTTCEE
T ss_pred EEECchhhcC---------------------------------------------------------------CCCCCcC
Confidence 5555433210 1235899
Q ss_pred EEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEEE
Q 024311 191 VILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHLI 255 (269)
Q Consensus 191 lIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~~ 255 (269)
+|+. ++.....+++.+.++|+ |+|++++..... ....++++.+++.||...++.
T Consensus 169 ~v~~-----~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~-----~~~~~~~~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 169 GVAL-----DLMEPWKVLEKAALALK-PDRFLVAYLPNI-----TQVLELVRAAEAHPFRLERVL 222 (258)
T ss_dssp EEEE-----ESSCGGGGHHHHHHHEE-EEEEEEEEESCH-----HHHHHHHHHHTTTTEEEEEEE
T ss_pred EEEE-----CCcCHHHHHHHHHHhCC-CCCEEEEEeCCH-----HHHHHHHHHHHHCCCceEEEE
Confidence 9997 24455678888999998 899988877543 246788888999997655543
No 117
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.09 E-value=9.5e-10 Score=95.30 Aligned_cols=39 Identities=36% Similarity=0.553 Sum_probs=34.5
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
.++.+|||+|||+|..++.++..|. +|++.|+++.+++.
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~ 78 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRV 78 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHH
Confidence 3578999999999999998888877 89999999999844
No 118
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.08 E-value=6.4e-10 Score=99.21 Aligned_cols=39 Identities=21% Similarity=0.106 Sum_probs=35.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
..+.+|||||||+|..++.++..|+ +|+++|.++.+++.
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~ 82 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDD 82 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHH
Confidence 4688999999999999999998887 89999999999843
No 119
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.08 E-value=2.4e-09 Score=100.02 Aligned_cols=110 Identities=16% Similarity=0.251 Sum_probs=73.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||||||+|..++.++..+ ..+|+++|+++.+++. .+.|+..+.. . ...+++|..
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~-----Ar~n~~~ngl-~--------------~~~~v~~~~ 281 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAS-----SRLNVETNMP-E--------------ALDRCEFMI 281 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHH-----HHHHHHHHCG-G--------------GGGGEEEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHH-----HHHHHHHcCC-C--------------cCceEEEEe
Confidence 45799999999999999988875 4599999999999844 4455543310 0 001344444
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
.|.... ...++||+|+
T Consensus 282 ~D~~~~----------------------------------------------------------------~~~~~fD~Ii 297 (375)
T 4dcm_A 282 NNALSG----------------------------------------------------------------VEPFRFNAVL 297 (375)
T ss_dssp CSTTTT----------------------------------------------------------------CCTTCEEEEE
T ss_pred chhhcc----------------------------------------------------------------CCCCCeeEEE
Confidence 443220 1345899999
Q ss_pred Eecccccc-----CCHHHHHHHHHHhcCCCCeEEEEEEccc
Q 024311 194 LTEIPYSV-----TSLKKLYLLIKKCLRPPYGVVYLATKKN 229 (269)
Q Consensus 194 asD~iY~~-----~~~~~L~~~l~~~L~~p~g~~~va~k~~ 229 (269)
+...++.. .....+++.+.++|+ |+|++++...++
T Consensus 298 ~nppfh~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~iv~n~~ 337 (375)
T 4dcm_A 298 CNPPFHQQHALTDNVAWEMFHHARRCLK-INGELYIVANRH 337 (375)
T ss_dssp ECCCC-------CCHHHHHHHHHHHHEE-EEEEEEEEEETT
T ss_pred ECCCcccCcccCHHHHHHHHHHHHHhCC-CCcEEEEEEECC
Confidence 97666532 223468889999999 899999876553
No 120
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.08 E-value=2.8e-09 Score=91.23 Aligned_cols=129 Identities=12% Similarity=0.017 Sum_probs=83.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||||||+|..++.++... ..+|+++|+++.+++. .+.|+..+ -.++++++.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~-----a~~~~~~~------------------~~~nv~~~~ 94 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVT-----AVQKVKDS------------------EAQNVKLLN 94 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHH-----HHHHHHHS------------------CCSSEEEEC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHH-----HHHHHHHc------------------CCCCEEEEe
Confidence 46799999999999998877653 3589999999999844 34444321 013577776
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|....+.. ...+.||.|+
T Consensus 95 ~d~~~l~~~-------------------------------------------------------------~~~~~~d~v~ 113 (213)
T 2fca_A 95 IDADTLTDV-------------------------------------------------------------FEPGEVKRVY 113 (213)
T ss_dssp CCGGGHHHH-------------------------------------------------------------CCTTSCCEEE
T ss_pred CCHHHHHhh-------------------------------------------------------------cCcCCcCEEE
Confidence 765542100 1234688887
Q ss_pred EeccccccC--------CHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEE
Q 024311 194 LTEIPYSVT--------SLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAH 253 (269)
Q Consensus 194 asD~iY~~~--------~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~ 253 (269)
..-..-++. ..+.+++.+.++|+ |+|.+++.+....+ ....++.+++.|+....
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lk-pgG~l~~~td~~~~-----~~~~~~~~~~~g~~~~~ 175 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMG-KGGSIHFKTDNRGL-----FEYSLKSFSEYGLLLTY 175 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHT-TSCEEEEEESCHHH-----HHHHHHHHHHHTCEEEE
T ss_pred EECCCCCcCccccccccCcHHHHHHHHHHcC-CCCEEEEEeCCHHH-----HHHHHHHHHHCCCcccc
Confidence 642211111 14789999999999 89999998743211 23445667777764333
No 121
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.07 E-value=1.7e-09 Score=92.27 Aligned_cols=136 Identities=18% Similarity=0.171 Sum_probs=87.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||+|||+|..++.++.. + ..+|+++|+++.+++. .+.|+... ....++++.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~-----a~~~~~~~-----------------~~~~~v~~~ 115 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADI-----ARSNIERA-----------------NLNDRVEVR 115 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHH-----HHHHHHHT-----------------TCTTTEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHH-----HHHHHHHc-----------------CCCCcEEEE
Confidence 5789999999999999888765 1 2489999999999843 44555332 022346776
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+... ... .....+||+|
T Consensus 116 ~~d~~~~~~--------------------------------------------------------~~~--~~~~~~fD~v 137 (223)
T 3duw_A 116 TGLALDSLQ--------------------------------------------------------QIE--NEKYEPFDFI 137 (223)
T ss_dssp ESCHHHHHH--------------------------------------------------------HHH--HTTCCCCSEE
T ss_pred EcCHHHHHH--------------------------------------------------------HHH--hcCCCCcCEE
Confidence 666432100 000 0122579999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc----------CcchHHHHHHhhhcCceeEEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF----------NNAARHLRSLVDEEGIFGAHLI 255 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~----------~~~~~~F~~~~~~~g~~~~~~~ 255 (269)
+. |.. ...++.+++.+.++|+ |+|++++..-. +.|. ...+.+|.+.++...-+...++
T Consensus 138 ~~-d~~--~~~~~~~l~~~~~~L~-pgG~lv~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 205 (223)
T 3duw_A 138 FI-DAD--KQNNPAYFEWALKLSR-PGTVIIGDNVV-REGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATAL 205 (223)
T ss_dssp EE-CSC--GGGHHHHHHHHHHTCC-TTCEEEEESCS-GGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred EE-cCC--cHHHHHHHHHHHHhcC-CCcEEEEeCCC-cCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEE
Confidence 96 332 4567888999999998 88977665322 2110 0235889999988766655553
No 122
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.07 E-value=9.1e-10 Score=101.44 Aligned_cols=105 Identities=25% Similarity=0.413 Sum_probs=73.4
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
..++++|||+|||+|..++.++..|+.+|++.|.++ +++. .+.|+..+. +..++++.
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~-----a~~~~~~~~-----------------l~~~v~~~ 104 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQH-----AEVLVKSNN-----------------LTDRIVVI 104 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHH-----HHHHHHHTT-----------------CTTTEEEE
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHH-----HHHHHHHcC-----------------CCCcEEEE
Confidence 347899999999999999999998888999999996 6532 333333220 22356666
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+.+ .+++||+|
T Consensus 105 ~~d~~~~~----------------------------------------------------------------~~~~~D~I 120 (348)
T 2y1w_A 105 PGKVEEVS----------------------------------------------------------------LPEQVDII 120 (348)
T ss_dssp ESCTTTCC----------------------------------------------------------------CSSCEEEE
T ss_pred EcchhhCC----------------------------------------------------------------CCCceeEE
Confidence 66654321 22479999
Q ss_pred EEecccccc--CCHHHHHHHHHHhcCCCCeEEEEE
Q 024311 193 LLTEIPYSV--TSLKKLYLLIKKCLRPPYGVVYLA 225 (269)
Q Consensus 193 lasD~iY~~--~~~~~L~~~l~~~L~~p~g~~~va 225 (269)
++..+.|+. +.....+..++++|+ |+|++++.
T Consensus 121 vs~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~ 154 (348)
T 2y1w_A 121 ISEPMGYMLFNERMLESYLHAKKYLK-PSGNMFPT 154 (348)
T ss_dssp EECCCBTTBTTTSHHHHHHHGGGGEE-EEEEEESC
T ss_pred EEeCchhcCChHHHHHHHHHHHhhcC-CCeEEEEe
Confidence 998777643 344555666788998 89988754
No 123
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.07 E-value=1.6e-09 Score=96.04 Aligned_cols=125 Identities=18% Similarity=0.141 Sum_probs=86.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
..+.+|||+|||+|..++.++.. + ..+|++.|.++++++. .+.|+..+. +..++++
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~-----a~~~~~~~~-----------------~~~~v~~ 168 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKL-----AESNLTKWG-----------------LIERVTI 168 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHH-----HHHHHHHTT-----------------CGGGEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHH-----HHHHHHHcC-----------------CCCCEEE
Confidence 36789999999999999888776 4 4599999999999844 444443220 1124555
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
..+|+.+. ....+||+
T Consensus 169 ~~~d~~~~----------------------------------------------------------------~~~~~~D~ 184 (277)
T 1o54_A 169 KVRDISEG----------------------------------------------------------------FDEKDVDA 184 (277)
T ss_dssp ECCCGGGC----------------------------------------------------------------CSCCSEEE
T ss_pred EECCHHHc----------------------------------------------------------------ccCCccCE
Confidence 44443221 12347999
Q ss_pred EEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEEE
Q 024311 192 ILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHLI 255 (269)
Q Consensus 192 IlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~~ 255 (269)
|++ | +.....+++.+.++|+ |+|++++..... ....++.+.+++.||...++.
T Consensus 185 V~~-~----~~~~~~~l~~~~~~L~-pgG~l~~~~~~~-----~~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 185 LFL-D----VPDPWNYIDKCWEALK-GGGRFATVCPTT-----NQVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp EEE-C----CSCGGGTHHHHHHHEE-EEEEEEEEESSH-----HHHHHHHHHHHHSSEEEEEEE
T ss_pred EEE-C----CcCHHHHHHHHHHHcC-CCCEEEEEeCCH-----HHHHHHHHHHHHCCCceeEEE
Confidence 997 3 3445577888888998 899998877543 246788888889897655553
No 124
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.07 E-value=4.5e-11 Score=103.33 Aligned_cols=133 Identities=21% Similarity=0.186 Sum_probs=85.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+.+|||+|||+|..++.++..+. +|+++|+++.+++. .+.|+..+. +..++++..+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~-~v~~vD~s~~~~~~-----a~~~~~~~~-----------------~~~~~~~~~~ 134 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGM-RVIAIDIDPVKIAL-----ARNNAEVYG-----------------IADKIEFICG 134 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHH-----HHHHHHHTT-----------------CGGGEEEEES
T ss_pred CCCEEEECccccCHHHHHHHHcCC-EEEEEECCHHHHHH-----HHHHHHHcC-----------------CCcCeEEEEC
Confidence 688999999999999999998884 99999999999844 455554320 1135666666
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|+...+ ...+||+|++
T Consensus 135 d~~~~~----------------------------------------------------------------~~~~~D~v~~ 150 (241)
T 3gdh_A 135 DFLLLA----------------------------------------------------------------SFLKADVVFL 150 (241)
T ss_dssp CHHHHG----------------------------------------------------------------GGCCCSEEEE
T ss_pred ChHHhc----------------------------------------------------------------ccCCCCEEEE
Confidence 543311 2348999998
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccc-------cccCcchHHHHHHhhhcCceeEEEE
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNY-------VGFNNAARHLRSLVDEEGIFGAHLI 255 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~-------fg~~~~~~~F~~~~~~~g~~~~~~~ 255 (269)
...+.........+..++++|+ |+|.+++...+.+ ....-....+...++..|.+..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~L~-pgG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~ 217 (241)
T 3gdh_A 151 SPPWGGPDYATAETFDIRTMMS-PDGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQN 217 (241)
T ss_dssp CCCCSSGGGGGSSSBCTTTSCS-SCHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEEE
T ss_pred CCCcCCcchhhhHHHHHHhhcC-CcceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEEEeh
Confidence 6666655555545556677787 7777554421111 0111245677777777776554443
No 125
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.07 E-value=2.8e-09 Score=93.14 Aligned_cols=122 Identities=11% Similarity=0.101 Sum_probs=82.3
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
-+|.+|||+|||+|..++.++..+ +.+|+++|.++..+ ...+.|+..+. +..++++.
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al-----~~A~~N~~~~g-----------------l~~~i~~~ 71 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPY-----QSAVKNVEAHG-----------------LKEKIQVR 71 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHH-----HHHHHHHHHTT-----------------CTTTEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHH-----HHHHHHHHHcC-----------------CCceEEEE
Confidence 367799999999999999999987 46899999999998 44556665431 22356666
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|+-+. + ....+||+|
T Consensus 72 ~~d~l~~--------------------------------------------------l-------------~~~~~~D~I 88 (225)
T 3kr9_A 72 LANGLAA--------------------------------------------------F-------------EETDQVSVI 88 (225)
T ss_dssp ECSGGGG--------------------------------------------------C-------------CGGGCCCEE
T ss_pred ECchhhh--------------------------------------------------c-------------ccCcCCCEE
Confidence 6654321 0 011269988
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCce
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIF 250 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~ 250 (269)
+-+-.-- .....++......|+ +++.+++.... +.....+.+++.||.
T Consensus 89 viaG~Gg--~~i~~Il~~~~~~L~-~~~~lVlq~~~-------~~~~vr~~L~~~Gf~ 136 (225)
T 3kr9_A 89 TIAGMGG--RLIARILEEGLGKLA-NVERLILQPNN-------REDDLRIWLQDHGFQ 136 (225)
T ss_dssp EEEEECH--HHHHHHHHHTGGGCT-TCCEEEEEESS-------CHHHHHHHHHHTTEE
T ss_pred EEcCCCh--HHHHHHHHHHHHHhC-CCCEEEEECCC-------CHHHHHHHHHHCCCE
Confidence 8554321 234556666666777 77776665442 577888889999974
No 126
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.07 E-value=2.8e-09 Score=86.02 Aligned_cols=141 Identities=14% Similarity=0.163 Sum_probs=90.9
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc-CC-CeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhc
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK-GA-GTVHFQDLSAETIRCTTVPNVLANLEQARERQS 91 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~-ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~ 91 (269)
.+...+.+.+... .....+.+|||+|||+|..++.++.. |+ .+|+++|.++ +++.
T Consensus 5 r~~~~l~~~~~~~----~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------------------ 61 (180)
T 1ej0_A 5 RAWFKLDEIQQSD----KLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI------------------ 61 (180)
T ss_dssp HHHHHHHHHHHHH----CCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC------------------
T ss_pred hHHHHHHHHHHHh----CCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc------------------
Confidence 3445556655543 12346789999999999999887765 44 5999999998 5410
Q ss_pred cCCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCccccccccc
Q 024311 92 RQPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLS 171 (269)
Q Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (269)
+++++..+|+...+...
T Consensus 62 ---------------~~~~~~~~d~~~~~~~~------------------------------------------------ 78 (180)
T 1ej0_A 62 ---------------VGVDFLQGDFRDELVMK------------------------------------------------ 78 (180)
T ss_dssp ---------------TTEEEEESCTTSHHHHH------------------------------------------------
T ss_pred ---------------CcEEEEEcccccchhhh------------------------------------------------
Confidence 23555556655432100
Q ss_pred CchhhhhhcccccCCCCccEEEEeccccccCCH-----------HHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHH
Q 024311 172 GSRAWERASEADQGEGGYDVILLTEIPYSVTSL-----------KKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHL 240 (269)
Q Consensus 172 gs~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~-----------~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F 240 (269)
.. .......+||+|++..+++..... ..+++.+.++|+ |+|.+++.... ......+
T Consensus 79 ------~~-~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~-----~~~~~~~ 145 (180)
T 1ej0_A 79 ------AL-LERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLA-PGGSFVVKVFQ-----GEGFDEY 145 (180)
T ss_dssp ------HH-HHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEES-----STTHHHH
T ss_pred ------hh-hccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcC-CCcEEEEEEec-----CCcHHHH
Confidence 00 000134589999997777665554 688899999998 89998886533 2346677
Q ss_pred HHHhhhcCceeEEE
Q 024311 241 RSLVDEEGIFGAHL 254 (269)
Q Consensus 241 ~~~~~~~g~~~~~~ 254 (269)
.+.+++. +-..++
T Consensus 146 ~~~~~~~-~~~~~~ 158 (180)
T 1ej0_A 146 LREIRSL-FTKVKV 158 (180)
T ss_dssp HHHHHHH-EEEEEE
T ss_pred HHHHHHh-hhhEEe
Confidence 7777764 433343
No 127
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.06 E-value=1e-09 Score=100.93 Aligned_cols=46 Identities=30% Similarity=0.271 Sum_probs=38.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQA 86 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~ 86 (269)
++.+|||||||+|..++.++..|+ +|++.|+++.+++. .+.|+..+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~-----a~~n~~~~ 198 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGW-----AKENQVLA 198 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHH-----HHHHHHHH
T ss_pred CCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHH-----HHHHHHHc
Confidence 567999999999999999999988 99999999999944 45555443
No 128
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.06 E-value=1.7e-09 Score=91.56 Aligned_cols=63 Identities=16% Similarity=0.207 Sum_probs=51.2
Q ss_pred CCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEE
Q 024311 186 EGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAH 253 (269)
Q Consensus 186 ~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~ 253 (269)
.++||+|+++.+++. .....+++.+.++|+ |+|++++......+ ....++.+.+++.||-..+
T Consensus 113 ~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L~-~gG~l~i~~~~~~~---~~~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 113 DESVDVAVFCLSLMG-TNIRDFLEEANRVLK-PGGLLKVAEVSSRF---EDVRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp TTCEEEEEEESCCCS-SCHHHHHHHHHHHEE-EEEEEEEEECGGGC---SCHHHHHHHHHHTTEEEEE
T ss_pred CCCEeEEEEehhccc-cCHHHHHHHHHHhCC-CCeEEEEEEcCCCC---CCHHHHHHHHHHCCCEEEE
Confidence 458999999999974 778899999999999 89999987654433 3678999999999975444
No 129
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.06 E-value=3.1e-09 Score=93.10 Aligned_cols=123 Identities=12% Similarity=0.108 Sum_probs=82.7
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
.-+|.+|||+|||+|..++.++..+ +.+|+++|+++..+ ...+.|+..+. +..++++
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al-----~~A~~N~~~~g-----------------l~~~I~~ 76 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPY-----QSALKNVSEHG-----------------LTSKIDV 76 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHH-----HHHHHHHHHTT-----------------CTTTEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHH-----HHHHHHHHHcC-----------------CCCcEEE
Confidence 3467899999999999999999987 46899999999998 44556665431 2235676
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
..+|+-+.. ....+||+
T Consensus 77 ~~gD~l~~~---------------------------------------------------------------~~~~~~D~ 93 (230)
T 3lec_A 77 RLANGLSAF---------------------------------------------------------------EEADNIDT 93 (230)
T ss_dssp EECSGGGGC---------------------------------------------------------------CGGGCCCE
T ss_pred EECchhhcc---------------------------------------------------------------ccccccCE
Confidence 666643310 01227999
Q ss_pred EEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCce
Q 024311 192 ILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIF 250 (269)
Q Consensus 192 IlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~ 250 (269)
|+-+=.-- .....++......|+ ++|.+++.... +.....+.+.+.||.
T Consensus 94 IviaGmGg--~lI~~IL~~~~~~l~-~~~~lIlqp~~-------~~~~lr~~L~~~Gf~ 142 (230)
T 3lec_A 94 ITICGMGG--RLIADILNNDIDKLQ-HVKTLVLQPNN-------REDDLRKWLAANDFE 142 (230)
T ss_dssp EEEEEECH--HHHHHHHHHTGGGGT-TCCEEEEEESS-------CHHHHHHHHHHTTEE
T ss_pred EEEeCCch--HHHHHHHHHHHHHhC-cCCEEEEECCC-------ChHHHHHHHHHCCCE
Confidence 87443332 234445555555676 77776666532 477888889999974
No 130
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.06 E-value=2.1e-09 Score=94.13 Aligned_cols=134 Identities=16% Similarity=0.148 Sum_probs=89.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||+|||+|..++.++.. + ..+|+++|+++++++. .+.|+..+ ....++++.
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~-----a~~~~~~~-----------------g~~~~v~~~ 120 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQV-----ARENLQLA-----------------GVDQRVTLR 120 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHH-----HHHHHHHT-----------------TCTTTEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHH-----HHHHHHHc-----------------CCCCcEEEE
Confidence 5789999999999999887765 2 3599999999999843 44555332 022356776
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+.. + .....++||+|
T Consensus 121 ~~d~~~~l--~----------------------------------------------------------~~~~~~~fD~V 140 (248)
T 3tfw_A 121 EGPALQSL--E----------------------------------------------------------SLGECPAFDLI 140 (248)
T ss_dssp ESCHHHHH--H----------------------------------------------------------TCCSCCCCSEE
T ss_pred EcCHHHHH--H----------------------------------------------------------hcCCCCCeEEE
Confidence 66643210 0 00123589999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc----------CcchHHHHHHhhhcCceeEEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF----------NNAARHLRSLVDEEGIFGAHLI 255 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~----------~~~~~~F~~~~~~~g~~~~~~~ 255 (269)
+. |. .....+.+++.+.++|+ |+|++++..-. +.|. ...+.+|.+.+.+..-+...++
T Consensus 141 ~~-d~--~~~~~~~~l~~~~~~Lk-pGG~lv~~~~~-~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 208 (248)
T 3tfw_A 141 FI-DA--DKPNNPHYLRWALRYSR-PGTLIIGDNVV-RDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATAL 208 (248)
T ss_dssp EE-CS--CGGGHHHHHHHHHHTCC-TTCEEEEECCS-GGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred EE-CC--chHHHHHHHHHHHHhcC-CCeEEEEeCCC-cCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEe
Confidence 97 43 35567788999999998 89988765332 2111 1246789999888765665554
No 131
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.05 E-value=1.9e-09 Score=90.97 Aligned_cols=39 Identities=18% Similarity=0.038 Sum_probs=34.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
.++.+|||+|||+|..++.++..+. +|+++|+++.+++.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~~-~v~~vD~~~~~~~~ 114 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLVQ-HVCSVERIKGLQWQ 114 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC-EEEEEecCHHHHHH
Confidence 4688999999999999988888765 99999999999843
No 132
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.04 E-value=1.6e-09 Score=95.00 Aligned_cols=100 Identities=23% Similarity=0.288 Sum_probs=72.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+.+|||+|||+|..+..++..+. +|+++|+++.+++.+ +.+.. .+ +..+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a-----~~~~~----------------------~~--~~~~ 103 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVA-----REKGV----------------------KN--VVEA 103 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHH-----HHHTC----------------------SC--EEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHH-----HhhcC----------------------CC--EEEC
Confidence 678999999999999998888876 899999999988432 22210 01 2223
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+ ...++||+|++
T Consensus 104 d~~~~~---------------------------------------------------------------~~~~~fD~v~~ 120 (260)
T 2avn_A 104 KAEDLP---------------------------------------------------------------FPSGAFEAVLA 120 (260)
T ss_dssp CTTSCC---------------------------------------------------------------SCTTCEEEEEE
T ss_pred cHHHCC---------------------------------------------------------------CCCCCEEEEEE
Confidence 322211 13458999999
Q ss_pred ecccccc-CCHHHHHHHHHHhcCCCCeEEEEEEcc
Q 024311 195 TEIPYSV-TSLKKLYLLIKKCLRPPYGVVYLATKK 228 (269)
Q Consensus 195 sD~iY~~-~~~~~L~~~l~~~L~~p~g~~~va~k~ 228 (269)
..++++. .....+++.+.++|+ |+|++++....
T Consensus 121 ~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 154 (260)
T 2avn_A 121 LGDVLSYVENKDKAFSEIRRVLV-PDGLLIATVDN 154 (260)
T ss_dssp CSSHHHHCSCHHHHHHHHHHHEE-EEEEEEEEEEB
T ss_pred cchhhhccccHHHHHHHHHHHcC-CCeEEEEEeCC
Confidence 8866543 668899999999999 89999887644
No 133
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.04 E-value=6.1e-09 Score=89.83 Aligned_cols=123 Identities=20% Similarity=0.194 Sum_probs=82.7
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
..+.+|||+|||+|..++.++.. ..+|+++|.++++++. .+.|...+. +.+++++..
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~-----a~~~~~~~~-----------------~~~~~~~~~ 146 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKT-----AQKNLKKFN-----------------LGKNVKFFN 146 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHH-----HHHHHHHTT-----------------CCTTEEEEC
T ss_pred CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHH-----HHHHHHHcC-----------------CCCcEEEEE
Confidence 36789999999999999888877 4599999999999843 444443220 123455544
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
.|+.+.. ....+||+|+
T Consensus 147 ~d~~~~~---------------------------------------------------------------~~~~~~D~v~ 163 (248)
T 2yvl_A 147 VDFKDAE---------------------------------------------------------------VPEGIFHAAF 163 (248)
T ss_dssp SCTTTSC---------------------------------------------------------------CCTTCBSEEE
T ss_pred cChhhcc---------------------------------------------------------------cCCCcccEEE
Confidence 4433210 0234799999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEE
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
. ++.....+++.+.++|+ |+|++++..... ....++.+.+++. +...++
T Consensus 164 ~-----~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~-----~~~~~~~~~l~~~-f~~~~~ 212 (248)
T 2yvl_A 164 V-----DVREPWHYLEKVHKSLM-EGAPVGFLLPTA-----NQVIKLLESIENY-FGNLEV 212 (248)
T ss_dssp E-----CSSCGGGGHHHHHHHBC-TTCEEEEEESSH-----HHHHHHHHHSTTT-EEEEEE
T ss_pred E-----CCcCHHHHHHHHHHHcC-CCCEEEEEeCCH-----HHHHHHHHHHHhh-CCcceE
Confidence 7 23355567888888998 899998887643 2356777777766 544443
No 134
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.04 E-value=1e-08 Score=94.25 Aligned_cols=131 Identities=18% Similarity=0.144 Sum_probs=89.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
++.+|||+|||+|..++.++... ..+++++|+ +.+++ ..+.|+..+ .+..++++..
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~-----~a~~~~~~~-----------------~~~~~v~~~~ 238 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAE-----RARRRFADA-----------------GLADRVTVAE 238 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHH-----HHHHHHHHT-----------------TCTTTEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHH-----HHHHHHHhc-----------------CCCCceEEEe
Confidence 57899999999999998877654 348999999 99884 344444321 0223566666
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+. .+..||+|+
T Consensus 239 ~d~~~~-----------------------------------------------------------------~~~~~D~v~ 253 (374)
T 1qzz_A 239 GDFFKP-----------------------------------------------------------------LPVTADVVL 253 (374)
T ss_dssp CCTTSC-----------------------------------------------------------------CSCCEEEEE
T ss_pred CCCCCc-----------------------------------------------------------------CCCCCCEEE
Confidence 654320 112499999
Q ss_pred EeccccccCCHH--HHHHHHHHhcCCCCeEEEEEEc--ccc------------------c-ccCcchHHHHHHhhhcCce
Q 024311 194 LTEIPYSVTSLK--KLYLLIKKCLRPPYGVVYLATK--KNY------------------V-GFNNAARHLRSLVDEEGIF 250 (269)
Q Consensus 194 asD~iY~~~~~~--~L~~~l~~~L~~p~g~~~va~k--~~~------------------f-g~~~~~~~F~~~~~~~g~~ 250 (269)
++.++++..... .+++.+.++|+ |+|+++|... ... . |...+..++.+.+++.||-
T Consensus 254 ~~~vl~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~ 332 (374)
T 1qzz_A 254 LSFVLLNWSDEDALTILRGCVRALE-PGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLA 332 (374)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEE
T ss_pred EeccccCCCHHHHHHHHHHHHHhcC-CCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCc
Confidence 999998766553 78999999998 8998887654 110 0 1112577888999999975
Q ss_pred eEEE
Q 024311 251 GAHL 254 (269)
Q Consensus 251 ~~~~ 254 (269)
..++
T Consensus 333 ~~~~ 336 (374)
T 1qzz_A 333 LASE 336 (374)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 4444
No 135
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.04 E-value=7.9e-10 Score=103.41 Aligned_cols=124 Identities=19% Similarity=0.202 Sum_probs=83.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+++|||+|||+|..++.++..|+++|+++|+++.+++ ..+.|+..|. +..+++++.+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~-----~a~~n~~~n~-----------------~~~~v~~~~~ 274 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIE-----TAKENAKLNG-----------------VEDRMKFIVG 274 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHH-----HHHHHHHHTT-----------------CGGGEEEEES
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHH-----HHHHHHHHcC-----------------CCccceEEEC
Confidence 67899999999999999999888889999999999984 4455554431 1125667666
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|..+.... + .....+||+|+.
T Consensus 275 d~~~~~~~-----------------------------------------------------~------~~~~~~fD~Vi~ 295 (396)
T 2as0_A 275 SAFEEMEK-----------------------------------------------------L------QKKGEKFDIVVL 295 (396)
T ss_dssp CHHHHHHH-----------------------------------------------------H------HHTTCCEEEEEE
T ss_pred CHHHHHHH-----------------------------------------------------H------HhhCCCCCEEEE
Confidence 64432100 0 012458999997
Q ss_pred ecccccc----------CCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhh
Q 024311 195 TEIPYSV----------TSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVD 245 (269)
Q Consensus 195 sD~iY~~----------~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~ 245 (269)
|..|.. ..+..++..+.++|+ |+|++++++....+ ....|.+.++
T Consensus 296 -dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~~~----~~~~~~~~v~ 350 (396)
T 2as0_A 296 -DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVK-DGGILVTCSCSQHV----DLQMFKDMII 350 (396)
T ss_dssp -CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEE-EEEEEEEEECCTTS----CHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEECCCCC----CHHHHHHHHH
Confidence 665543 335567777777888 89988887765543 2344554443
No 136
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.04 E-value=2.5e-09 Score=95.26 Aligned_cols=123 Identities=12% Similarity=0.038 Sum_probs=81.8
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
.++.+|||+|||+|..++.++.. ++.+|++.|.++.+++ .++.|+..|. + .++.++
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~-----~a~~n~~~n~-----------------l-~~~~~~ 174 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYH-----YLCENIKLNK-----------------L-NNVIPI 174 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHH-----HHHHHHHHTT-----------------C-SSEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHH-----HHHHHHHHcC-----------------C-CCEEEE
Confidence 46789999999999999998876 4569999999999984 4455554431 1 235555
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+.+ ...+||+|
T Consensus 175 ~~d~~~~~----------------------------------------------------------------~~~~~D~V 190 (272)
T 3a27_A 175 LADNRDVE----------------------------------------------------------------LKDVADRV 190 (272)
T ss_dssp ESCGGGCC----------------------------------------------------------------CTTCEEEE
T ss_pred ECChHHcC----------------------------------------------------------------ccCCceEE
Confidence 55433210 13479999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcC
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEG 248 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g 248 (269)
+. |..+ ....++..+.+.|+ |+|++++.+....-...+...+.++.+++..
T Consensus 191 i~-d~p~---~~~~~l~~~~~~Lk-pgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~ 241 (272)
T 3a27_A 191 IM-GYVH---KTHKFLDKTFEFLK-DRGVIHYHETVAEKIMYERPIERLKFYAEKN 241 (272)
T ss_dssp EE-CCCS---SGGGGHHHHHHHEE-EEEEEEEEEEEEGGGTTTHHHHHHHHHHHHT
T ss_pred EE-CCcc---cHHHHHHHHHHHcC-CCCEEEEEEcCccccccccHHHHHHHHHHHh
Confidence 87 4444 55667777778898 8999998765542111233445556666543
No 137
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.04 E-value=1.2e-08 Score=92.56 Aligned_cols=131 Identities=15% Similarity=0.150 Sum_probs=89.2
Q ss_pred CCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 36 GKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
+.+|||+|||+|..++.++.. +..+++++|+ +.+++. .+.|+.... ...++++..+
T Consensus 168 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~-----a~~~~~~~~-----------------~~~~v~~~~~ 224 (334)
T 2ip2_A 168 GRSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGV-----ARDNLSSLL-----------------AGERVSLVGG 224 (334)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHH-----HHHHTHHHH-----------------HTTSEEEEES
T ss_pred CCEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHH-----HHHHHhhcC-----------------CCCcEEEecC
Confidence 389999999999988777664 3348999999 888843 333332210 1235666655
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|..+ + .+.+||+|++
T Consensus 225 d~~~-~----------------------------------------------------------------~~~~~D~v~~ 239 (334)
T 2ip2_A 225 DMLQ-E----------------------------------------------------------------VPSNGDIYLL 239 (334)
T ss_dssp CTTT-C----------------------------------------------------------------CCSSCSEEEE
T ss_pred CCCC-C----------------------------------------------------------------CCCCCCEEEE
Confidence 5432 0 1247999999
Q ss_pred eccccccCCH--HHHHHHHHHhcCCCCeEEEEEEcccc-------------------cccCcchHHHHHHhhhcCceeEE
Q 024311 195 TEIPYSVTSL--KKLYLLIKKCLRPPYGVVYLATKKNY-------------------VGFNNAARHLRSLVDEEGIFGAH 253 (269)
Q Consensus 195 sD~iY~~~~~--~~L~~~l~~~L~~p~g~~~va~k~~~-------------------fg~~~~~~~F~~~~~~~g~~~~~ 253 (269)
..++++.... ..+++.+.+.|+ |+|+++|...... -|...+..++.+.+++.||-..+
T Consensus 240 ~~vl~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 318 (334)
T 2ip2_A 240 SRIIGDLDEAASLRLLGNCREAMA-GDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVER 318 (334)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHSC-TTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred chhccCCCHHHHHHHHHHHHHhcC-CCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeE
Confidence 9999865444 489999999998 8999888732110 01223578899999999985555
Q ss_pred EE
Q 024311 254 LI 255 (269)
Q Consensus 254 ~~ 255 (269)
+.
T Consensus 319 ~~ 320 (334)
T 2ip2_A 319 IV 320 (334)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 138
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.03 E-value=3.7e-09 Score=90.12 Aligned_cols=69 Identities=12% Similarity=0.112 Sum_probs=52.7
Q ss_pred CCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccc----------------cc--cCcchHHHHHHhhhc
Q 024311 186 EGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNY----------------VG--FNNAARHLRSLVDEE 247 (269)
Q Consensus 186 ~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~----------------fg--~~~~~~~F~~~~~~~ 247 (269)
.++||+|++..++++......+++.+.++|+ |+|.+++...... +. ..-+..++.+.+++.
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 178 (219)
T 1vlm_A 100 DESFDFALMVTTICFVDDPERALKEAYRILK-KGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKA 178 (219)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHHHHHEE-EEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHT
T ss_pred CCCeeEEEEcchHhhccCHHHHHHHHHHHcC-CCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHC
Confidence 4589999999999999999999999999999 8999988743210 00 012568889999999
Q ss_pred CceeEEEE
Q 024311 248 GIFGAHLI 255 (269)
Q Consensus 248 g~~~~~~~ 255 (269)
||-..++.
T Consensus 179 Gf~~~~~~ 186 (219)
T 1vlm_A 179 GFEEFKVV 186 (219)
T ss_dssp TCEEEEEE
T ss_pred CCeEEEEe
Confidence 98555543
No 139
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.02 E-value=1.2e-08 Score=92.62 Aligned_cols=132 Identities=13% Similarity=0.044 Sum_probs=91.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
...+|||+|||+|...+.++.. +..++++.|+ +.+++ ..+.++... .+..+++|..
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~-----~a~~~~~~~-----------------~~~~~v~~~~ 225 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPAS-----AAHRRFLDT-----------------GLSGRAQVVV 225 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHH-----HHHHHHHHT-----------------TCTTTEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHH-----HHHHhhhhc-----------------CcCcCeEEec
Confidence 4579999999999988776654 3458999999 98884 344444321 1224577766
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+ + .+.+||+|+
T Consensus 226 ~d~~~-~----------------------------------------------------------------~p~~~D~v~ 240 (332)
T 3i53_A 226 GSFFD-P----------------------------------------------------------------LPAGAGGYV 240 (332)
T ss_dssp CCTTS-C----------------------------------------------------------------CCCSCSEEE
T ss_pred CCCCC-C----------------------------------------------------------------CCCCCcEEE
Confidence 65431 0 112899999
Q ss_pred EeccccccCC--HHHHHHHHHHhcCCCCeEEEEEEcccc----------------cccCcchHHHHHHhhhcCceeEEEE
Q 024311 194 LTEIPYSVTS--LKKLYLLIKKCLRPPYGVVYLATKKNY----------------VGFNNAARHLRSLVDEEGIFGAHLI 255 (269)
Q Consensus 194 asD~iY~~~~--~~~L~~~l~~~L~~p~g~~~va~k~~~----------------fg~~~~~~~F~~~~~~~g~~~~~~~ 255 (269)
+..++++... ...+++.+++.|+ |+|+++|...... .|...+..++.+.+++.||-..++.
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 319 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAG-SGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAH 319 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHT-TTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred EehhhccCCHHHHHHHHHHHHHhcC-CCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 9999987766 4789999999998 8999988643110 1112357889999999998655553
No 140
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.02 E-value=4.3e-09 Score=92.99 Aligned_cols=49 Identities=8% Similarity=0.116 Sum_probs=39.9
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHh
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQA 86 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~ 86 (269)
.-+|.+|||+|||+|..++.++..+ +.+|+++|+++..++ ..+.|+..+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~-----~A~~N~~~~ 68 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQ-----SAQKQVRSS 68 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHH-----HHHHHHHHT
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHH-----HHHHHHHHc
Confidence 3467899999999999999999987 458999999999984 455565443
No 141
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.01 E-value=3.1e-08 Score=91.65 Aligned_cols=132 Identities=13% Similarity=0.115 Sum_probs=92.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||+|||+|...+.++... ..+++++|+ +.+++ ..+.++... .+..+++|..
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~-----~a~~~~~~~-----------------~l~~~v~~~~ 258 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAE-----EARELLTGR-----------------GLADRCEILP 258 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHH-----HHHHHHHHT-----------------TCTTTEEEEE
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHH-----HHHHhhhhc-----------------CcCCceEEec
Confidence 56899999999999998777653 348999999 98884 444444321 1224567766
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+ + .+.+||+|+
T Consensus 259 ~d~~~-~----------------------------------------------------------------~p~~~D~v~ 273 (369)
T 3gwz_A 259 GDFFE-T----------------------------------------------------------------IPDGADVYL 273 (369)
T ss_dssp CCTTT-C----------------------------------------------------------------CCSSCSEEE
T ss_pred cCCCC-C----------------------------------------------------------------CCCCceEEE
Confidence 65441 0 112799999
Q ss_pred EeccccccCCHH--HHHHHHHHhcCCCCeEEEEEEccccc------------------ccCcchHHHHHHhhhcCceeEE
Q 024311 194 LTEIPYSVTSLK--KLYLLIKKCLRPPYGVVYLATKKNYV------------------GFNNAARHLRSLVDEEGIFGAH 253 (269)
Q Consensus 194 asD~iY~~~~~~--~L~~~l~~~L~~p~g~~~va~k~~~f------------------g~~~~~~~F~~~~~~~g~~~~~ 253 (269)
++.++++..... .+++.+++.|+ |+|+++|......- |...+..+|.+.+++.||-..+
T Consensus 274 ~~~vlh~~~d~~~~~~L~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 352 (369)
T 3gwz_A 274 IKHVLHDWDDDDVVRILRRIATAMK-PDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVER 352 (369)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCC-TTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEE
T ss_pred hhhhhccCCHHHHHHHHHHHHHHcC-CCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEE
Confidence 999998877655 68999999998 89999886322100 1123568899999999986555
Q ss_pred EE
Q 024311 254 LI 255 (269)
Q Consensus 254 ~~ 255 (269)
+.
T Consensus 353 ~~ 354 (369)
T 3gwz_A 353 SL 354 (369)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 142
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.01 E-value=6.8e-09 Score=87.33 Aligned_cols=60 Identities=22% Similarity=0.198 Sum_probs=44.6
Q ss_pred eccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 13 WESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 13 W~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
|.....+++.+....... ...++.+|||+|||+|..++.++..|+.+|++.|+++.+++.
T Consensus 28 ~~~~~~~~~~l~~~~~~~-~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~ 87 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSL-GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDV 87 (207)
T ss_dssp CCCCHHHHHHHHHHHHHT-TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred ecCchHHHHHHHHHHHHc-CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHH
Confidence 445555555555433211 234788999999999999999998887789999999999843
No 143
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.00 E-value=4.9e-09 Score=94.34 Aligned_cols=47 Identities=15% Similarity=0.177 Sum_probs=40.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQA 86 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~ 86 (269)
.|.+|||+|||+|..++.+|+.|+.+|++.|.||..+ ..++.|+..|
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~-----~~~~~N~~~N 171 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTF-----KFLVENIHLN 171 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHH-----HHHHHHHHHT
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHH-----HHHHHHHHHc
Confidence 6889999999999999999999988999999999998 4455566554
No 144
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.00 E-value=2.9e-09 Score=91.91 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=81.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||||||+|..++.+|...+ .+|++.|.++.++.. .+.|+..+. ..+++++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~-----a~~~~~~~~------------------l~nv~~~~ 90 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGA-----CLASAHEEG------------------LSNLRVMC 90 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHH-----HHHHHHHTT------------------CSSEEEEC
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHH-----HHHHHHHhC------------------CCcEEEEE
Confidence 577999999999999988776543 489999999999843 444443220 13567766
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+.. .. ....+.||.|+
T Consensus 91 ~Da~~~l--------------------------------------------------------~~----~~~~~~~d~v~ 110 (218)
T 3dxy_A 91 HDAVEVL--------------------------------------------------------HK----MIPDNSLRMVQ 110 (218)
T ss_dssp SCHHHHH--------------------------------------------------------HH----HSCTTCEEEEE
T ss_pred CCHHHHH--------------------------------------------------------HH----HcCCCChheEE
Confidence 6533210 00 01345899999
Q ss_pred Ee--ccccccCCH------HHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcC
Q 024311 194 LT--EIPYSVTSL------KKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEG 248 (269)
Q Consensus 194 as--D~iY~~~~~------~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g 248 (269)
.. |..+..... +.+++.+.++|+ |+|++++++....+ .....+.++..+
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~Lk-pGG~l~i~td~~~~-----~~~~~~~~~~~~ 167 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQ-LGGVFHMATDWEPY-----AEHMLEVMSSID 167 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEE-EEEEEEEEESCHHH-----HHHHHHHHHTST
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcC-CCcEEEEEeCCHHH-----HHHHHHHHHhCC
Confidence 86 544333332 359999999999 99999999864322 334555555443
No 145
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.00 E-value=2.7e-09 Score=96.03 Aligned_cols=119 Identities=16% Similarity=0.121 Sum_probs=78.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
++.+|||+|||+|.....++..+..+|+++|+++.+++.+ +.+...... +. ......++++..+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a-----~~~~~~~~~---~~--------~~~~~~~~~~~~~ 97 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQC-----QQRYEDMKN---RR--------DSEYIFSAEFITA 97 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHH-----HHHHHHHHS---SS--------CC-CCCEEEEEEC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHH-----HHHHHHhhh---cc--------cccccceEEEEEe
Confidence 5779999999999988777766666999999999998543 333322100 00 0001235677777
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+... .+ ....++||+|++
T Consensus 98 D~~~~~~~~---------------------------------------------~~------------~~~~~~fD~V~~ 120 (313)
T 3bgv_A 98 DSSKELLID---------------------------------------------KF------------RDPQMCFDICSC 120 (313)
T ss_dssp CTTTSCSTT---------------------------------------------TC------------SSTTCCEEEEEE
T ss_pred cccccchhh---------------------------------------------hc------------ccCCCCEEEEEE
Confidence 766532000 00 012358999999
Q ss_pred ecccccc-C---CHHHHHHHHHHhcCCCCeEEEEEEc
Q 024311 195 TEIPYSV-T---SLKKLYLLIKKCLRPPYGVVYLATK 227 (269)
Q Consensus 195 sD~iY~~-~---~~~~L~~~l~~~L~~p~g~~~va~k 227 (269)
+.++++. . ....+++.+.++|+ |+|++++++.
T Consensus 121 ~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~ 156 (313)
T 3bgv_A 121 QFVCHYSFESYEQADMMLRNACERLS-PGGYFIGTTP 156 (313)
T ss_dssp ETCGGGGGGSHHHHHHHHHHHHTTEE-EEEEEEEEEE
T ss_pred ecchhhccCCHHHHHHHHHHHHHHhC-CCcEEEEecC
Confidence 9999765 3 34678888888998 8999988754
No 146
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.00 E-value=3.1e-09 Score=96.22 Aligned_cols=149 Identities=14% Similarity=0.191 Sum_probs=92.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHH-hhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQ-ARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||||||+|.....++.. +..+|++.|+++.+++.+ +.|+.. +.. . ..+++++.
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a-----~~~~~~~~~~-~--------------~~~~v~~~ 154 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQS-----KQHFPQISRS-L--------------ADPRATVR 154 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHH-----HHHCHHHHGG-G--------------GCTTEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHH-----HHHhHHhhcc-c--------------CCCcEEEE
Confidence 5689999999999999888766 346999999999999654 223211 100 0 12356665
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|...... ....++||+|
T Consensus 155 ~~D~~~~~~-------------------------------------------------------------~~~~~~fDvI 173 (304)
T 3bwc_A 155 VGDGLAFVR-------------------------------------------------------------QTPDNTYDVV 173 (304)
T ss_dssp ESCHHHHHH-------------------------------------------------------------SSCTTCEEEE
T ss_pred ECcHHHHHH-------------------------------------------------------------hccCCceeEE
Confidence 555332110 0024589999
Q ss_pred EEecccccc-CCH----HHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEEEee-ec--CcceE
Q 024311 193 LLTEIPYSV-TSL----KKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHLIKE-MT--DRDIW 264 (269)
Q Consensus 193 lasD~iY~~-~~~----~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~~~~-~~--~~~i~ 264 (269)
++ |..+.. ... ..+++.++++|+ |+|++++.....++ .......+.+.+++.||-.+++... .. ..+.|
T Consensus 174 i~-d~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~~~~~-~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w 250 (304)
T 3bwc_A 174 II-DTTDPAGPASKLFGEAFYKDVLRILK-PDGICCNQGESIWL-DLELIEKMSRFIRETGFASVQYALMHVPTYPCGSI 250 (304)
T ss_dssp EE-ECC---------CCHHHHHHHHHHEE-EEEEEEEEECCTTT-CHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCC
T ss_pred EE-CCCCccccchhhhHHHHHHHHHHhcC-CCcEEEEecCCccc-chHHHHHHHHHHHhCCCCcEEEEEeecccccCcce
Confidence 98 443321 111 578899999999 89998887654332 1235678888999999855554332 12 24667
Q ss_pred EEE
Q 024311 265 KFF 267 (269)
Q Consensus 265 ~~~ 267 (269)
.|.
T Consensus 251 ~f~ 253 (304)
T 3bwc_A 251 GTL 253 (304)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 147
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.99 E-value=9.3e-10 Score=106.03 Aligned_cols=38 Identities=32% Similarity=0.572 Sum_probs=34.0
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
.++++|||+|||+|.+++.++..++.+|+++|.++ +++
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~ 194 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQ 194 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHH
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHH
Confidence 47889999999999999999988888999999987 763
No 148
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.99 E-value=1.7e-08 Score=92.63 Aligned_cols=131 Identities=15% Similarity=0.098 Sum_probs=91.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||+|||+|..+..++... ..+|+++|+ +.+++ ..+.|+... ....++++..
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~-----~a~~~~~~~-----------------~~~~~v~~~~ 246 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAID-----LVNENAAEK-----------------GVADRMRGIA 246 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHH-----HHHHHHHHT-----------------TCTTTEEEEE
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHH-----HHHHHHHhc-----------------CCCCCEEEEe
Confidence 57899999999999998777653 348999999 98884 344444321 0123466766
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+.+ ...+|+|+
T Consensus 247 ~d~~~~~-----------------------------------------------------------------~~~~D~v~ 261 (359)
T 1x19_A 247 VDIYKES-----------------------------------------------------------------YPEADAVL 261 (359)
T ss_dssp CCTTTSC-----------------------------------------------------------------CCCCSEEE
T ss_pred CccccCC-----------------------------------------------------------------CCCCCEEE
Confidence 6644321 11349999
Q ss_pred EeccccccCC--HHHHHHHHHHhcCCCCeEEEEEEccc----------------ccccC------cchHHHHHHhhhcCc
Q 024311 194 LTEIPYSVTS--LKKLYLLIKKCLRPPYGVVYLATKKN----------------YVGFN------NAARHLRSLVDEEGI 249 (269)
Q Consensus 194 asD~iY~~~~--~~~L~~~l~~~L~~p~g~~~va~k~~----------------~fg~~------~~~~~F~~~~~~~g~ 249 (269)
++.++++... ...+++.+.++|+ |+|+++|..... ..+.+ .+..++.+.+++.||
T Consensus 262 ~~~vlh~~~d~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf 340 (359)
T 1x19_A 262 FCRILYSANEQLSTIMCKKAFDAMR-SGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGY 340 (359)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCC-TTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTC
T ss_pred EechhccCCHHHHHHHHHHHHHhcC-CCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCC
Confidence 9999987766 7788999999998 899987764111 01212 467899999999998
Q ss_pred eeEEE
Q 024311 250 FGAHL 254 (269)
Q Consensus 250 ~~~~~ 254 (269)
-..++
T Consensus 341 ~~v~~ 345 (359)
T 1x19_A 341 KDVTM 345 (359)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 55554
No 149
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.98 E-value=1.7e-08 Score=93.67 Aligned_cols=125 Identities=14% Similarity=0.236 Sum_probs=84.4
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
.++++|||+| |+|..++.++..++ .+|++.|+++.+++. .+.|+..+. +. +++++
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~-----a~~~~~~~g-----------------~~-~v~~~ 226 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKF-----IEKAANEIG-----------------YE-DIEIF 226 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHH-----HHHHHHHHT-----------------CC-CEEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHH-----HHHHHHHcC-----------------CC-CEEEE
Confidence 4689999999 99999999988876 799999999999944 455554331 12 57777
Q ss_pred cCCCCC-cchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 113 AGDWEE-LPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 113 ~~dw~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
.+|... ++. ...++||+
T Consensus 227 ~~D~~~~l~~--------------------------------------------------------------~~~~~fD~ 244 (373)
T 2qm3_A 227 TFDLRKPLPD--------------------------------------------------------------YALHKFDT 244 (373)
T ss_dssp CCCTTSCCCT--------------------------------------------------------------TTSSCBSE
T ss_pred EChhhhhchh--------------------------------------------------------------hccCCccE
Confidence 777654 110 02347999
Q ss_pred EEEeccccccCCHHHHHHHHHHhcCCCCe-EEEEEEcccccccCcch---HHHHHHhh-hcCce
Q 024311 192 ILLTEIPYSVTSLKKLYLLIKKCLRPPYG-VVYLATKKNYVGFNNAA---RHLRSLVD-EEGIF 250 (269)
Q Consensus 192 IlasD~iY~~~~~~~L~~~l~~~L~~p~g-~~~va~k~~~fg~~~~~---~~F~~~~~-~~g~~ 250 (269)
|+. |..|.......+++.+.++|+ |+| ++++++... .++. ....+.++ +.|+-
T Consensus 245 Vi~-~~p~~~~~~~~~l~~~~~~Lk-pgG~~~~~~~~~~----~~~~~~~~~~~~~l~~~~g~~ 302 (373)
T 2qm3_A 245 FIT-DPPETLEAIRAFVGRGIATLK-GPRCAGYFGITRR----ESSLDKWREIQKLLLNEFNVV 302 (373)
T ss_dssp EEE-CCCSSHHHHHHHHHHHHHTBC-STTCEEEEEECTT----TCCHHHHHHHHHHHHHTSCCE
T ss_pred EEE-CCCCchHHHHHHHHHHHHHcc-cCCeEEEEEEecC----cCCHHHHHHHHHHHHHhcCcc
Confidence 997 666665446778888888998 888 546555331 1233 34445565 66753
No 150
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.98 E-value=1.6e-09 Score=108.93 Aligned_cols=123 Identities=21% Similarity=0.260 Sum_probs=86.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCC-Ceeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLA-PSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~ 113 (269)
+|++|||||||||..++.++..|+.+|++.|+++.+++. .+.|+..|. +. .+++++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~-----a~~N~~~ng-----------------l~~~~v~~i~ 596 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEW-----AERNLRLNG-----------------LTGRAHRLIQ 596 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHH-----HHHHHHHTT-----------------CCSTTEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHH-----HHHHHHHcC-----------------CCccceEEEe
Confidence 688999999999999999999999889999999999944 455554431 11 2466655
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+. -. ....+||+|+
T Consensus 597 ~D~~~~---------------------------------------------------------l~-----~~~~~fD~Ii 614 (703)
T 3v97_A 597 ADCLAW---------------------------------------------------------LR-----EANEQFDLIF 614 (703)
T ss_dssp SCHHHH---------------------------------------------------------HH-----HCCCCEEEEE
T ss_pred cCHHHH---------------------------------------------------------HH-----hcCCCccEEE
Confidence 553321 00 1235899999
Q ss_pred Eecccccc------------CCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCc
Q 024311 194 LTEIPYSV------------TSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGI 249 (269)
Q Consensus 194 asD~iY~~------------~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~ 249 (269)
. |..|.. ..+..++..+.++|+ |+|++++++..+.|... .+.+++.|+
T Consensus 615 ~-DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lk-pgG~L~~s~~~~~~~~~------~~~l~~~g~ 674 (703)
T 3v97_A 615 I-DPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLR-AGGTIMFSNNKRGFRMD------LDGLAKLGL 674 (703)
T ss_dssp E-CCCSBC-------CCBHHHHHHHHHHHHHHHEE-EEEEEEEEECCTTCCCC------HHHHHHTTE
T ss_pred E-CCccccCCccchhHHHHHHHHHHHHHHHHHhcC-CCcEEEEEECCcccccC------HHHHHHcCC
Confidence 7 554422 345667888888998 89999999888766432 344455564
No 151
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.98 E-value=5.8e-09 Score=90.21 Aligned_cols=132 Identities=17% Similarity=0.224 Sum_probs=86.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
++++|||+|||+|..++.++... ..+|++.|+++.+++. .+.|+... .+..+++++.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~-----a~~~~~~~-----------------~~~~~v~~~~ 128 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQY-----AKQNLATY-----------------HFENQVRIIE 128 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHH-----HHHHHHHT-----------------TCTTTEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHH-----HHHHHHHc-----------------CCCCcEEEEE
Confidence 57899999999999998888732 4599999999999843 44554332 0223567766
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+.. . ....++||+|+
T Consensus 129 ~d~~~~~--------------------------------------------------------~-----~~~~~~fD~V~ 147 (232)
T 3ntv_A 129 GNALEQF--------------------------------------------------------E-----NVNDKVYDMIF 147 (232)
T ss_dssp SCGGGCH--------------------------------------------------------H-----HHTTSCEEEEE
T ss_pred CCHHHHH--------------------------------------------------------H-----hhccCCccEEE
Confidence 6644310 0 00145899999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc---------------CcchHHHHHHhhhcCceeEEE
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF---------------NNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~---------------~~~~~~F~~~~~~~g~~~~~~ 254 (269)
.. .....++.+++.+.++|+ |+|++++.. ..+.|. ...+.+|.+.+.+..-+...+
T Consensus 148 ~~---~~~~~~~~~l~~~~~~Lk-pgG~lv~d~-~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 218 (232)
T 3ntv_A 148 ID---AAKAQSKKFFEIYTPLLK-HQGLVITDN-VLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNF 218 (232)
T ss_dssp EE---TTSSSHHHHHHHHGGGEE-EEEEEEEEC-TTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred Ec---CcHHHHHHHHHHHHHhcC-CCeEEEEee-CCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEE
Confidence 63 346678889999999999 899887632 222221 013577888887665444443
No 152
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.98 E-value=2.1e-08 Score=85.77 Aligned_cols=108 Identities=21% Similarity=0.170 Sum_probs=72.7
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-CC-CeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-GA-GTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
..+.+|||+|||+|..++.++.. |+ .+|++.|.++.+++ .++.|... .+++++
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~-----~~~~~~~~--------------------~~~v~~ 126 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLR-----ELVPIVEE--------------------RRNIVP 126 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHH-----HHHHHHSS--------------------CTTEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHH-----HHHHHHhc--------------------cCCCEE
Confidence 36789999999999999887754 43 58999999999884 33444321 035666
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
..+|....... .....+||+
T Consensus 127 ~~~d~~~~~~~------------------------------------------------------------~~~~~~~D~ 146 (227)
T 1g8a_A 127 ILGDATKPEEY------------------------------------------------------------RALVPKVDV 146 (227)
T ss_dssp EECCTTCGGGG------------------------------------------------------------TTTCCCEEE
T ss_pred EEccCCCcchh------------------------------------------------------------hcccCCceE
Confidence 66654432100 012348999
Q ss_pred EEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccc
Q 024311 192 ILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKN 229 (269)
Q Consensus 192 IlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~ 229 (269)
|++ |.. .+.....++..+.++|+ |+|.+++..+..
T Consensus 147 v~~-~~~-~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 181 (227)
T 1g8a_A 147 IFE-DVA-QPTQAKILIDNAEVYLK-RGGYGMIAVKSR 181 (227)
T ss_dssp EEE-CCC-STTHHHHHHHHHHHHEE-EEEEEEEEEEGG
T ss_pred EEE-CCC-CHhHHHHHHHHHHHhcC-CCCEEEEEEecC
Confidence 996 554 34444466888999999 899988875543
No 153
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.98 E-value=1.8e-08 Score=92.23 Aligned_cols=131 Identities=16% Similarity=0.190 Sum_probs=90.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
++.+|||+|||+|..++.++..++ .+++++|+ +.+++ ..+.|+..+ ....++++..
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~-----~a~~~~~~~-----------------~~~~~v~~~~ 239 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVD-----TARSYLKDE-----------------GLSDRVDVVE 239 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHH-----HHHHHHHHT-----------------TCTTTEEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHH-----HHHHHHHhc-----------------CCCCceEEEe
Confidence 578999999999999987776543 48999999 88884 344454321 0123567766
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|+.+. .+.+||+|+
T Consensus 240 ~d~~~~-----------------------------------------------------------------~~~~~D~v~ 254 (360)
T 1tw3_A 240 GDFFEP-----------------------------------------------------------------LPRKADAII 254 (360)
T ss_dssp CCTTSC-----------------------------------------------------------------CSSCEEEEE
T ss_pred CCCCCC-----------------------------------------------------------------CCCCccEEE
Confidence 664421 112499999
Q ss_pred EeccccccCCH--HHHHHHHHHhcCCCCeEEEEEEcc-cc------c-------------ccCcchHHHHHHhhhcCcee
Q 024311 194 LTEIPYSVTSL--KKLYLLIKKCLRPPYGVVYLATKK-NY------V-------------GFNNAARHLRSLVDEEGIFG 251 (269)
Q Consensus 194 asD~iY~~~~~--~~L~~~l~~~L~~p~g~~~va~k~-~~------f-------------g~~~~~~~F~~~~~~~g~~~ 251 (269)
++.++++.... ..+++.+.++|+ |+|+++|.... .. + |...+..++.+.+++.||-.
T Consensus 255 ~~~vl~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 333 (360)
T 1tw3_A 255 LSFVLLNWPDHDAVRILTRCAEALE-PGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVV 333 (360)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEE-EEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEE
T ss_pred EcccccCCCHHHHHHHHHHHHHhcC-CCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeE
Confidence 99999876544 478999999998 89998887432 10 0 11125678889999999755
Q ss_pred EEE
Q 024311 252 AHL 254 (269)
Q Consensus 252 ~~~ 254 (269)
.++
T Consensus 334 ~~~ 336 (360)
T 1tw3_A 334 EEV 336 (360)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 154
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.97 E-value=1e-08 Score=94.69 Aligned_cols=134 Identities=10% Similarity=0.101 Sum_probs=89.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
..++|||+|||+|...+.++... ..+|++.|. +++++ ..+.++... ....++++..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~-----~a~~~~~~~-----------------~~~~~v~~~~ 235 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLE-----MMRKQTAGL-----------------SGSERIHGHG 235 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHH-----HHHHHHTTC-----------------TTGGGEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHH-----HHHHHHHhc-----------------CcccceEEEE
Confidence 56799999999999998777643 348999999 88883 344443211 0124567766
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..... + ..+.+||+|+
T Consensus 236 ~d~~~~~-------------------------------------------------~-------------~~p~~~D~v~ 253 (363)
T 3dp7_A 236 ANLLDRD-------------------------------------------------V-------------PFPTGFDAVW 253 (363)
T ss_dssp CCCCSSS-------------------------------------------------C-------------CCCCCCSEEE
T ss_pred ccccccC-------------------------------------------------C-------------CCCCCcCEEE
Confidence 6644310 0 0125899999
Q ss_pred EeccccccCC--HHHHHHHHHHhcCCCCeEEEEEEcccc----------------------c--ccCcchHHHHHHhhhc
Q 024311 194 LTEIPYSVTS--LKKLYLLIKKCLRPPYGVVYLATKKNY----------------------V--GFNNAARHLRSLVDEE 247 (269)
Q Consensus 194 asD~iY~~~~--~~~L~~~l~~~L~~p~g~~~va~k~~~----------------------f--g~~~~~~~F~~~~~~~ 247 (269)
++.++++... ...+++.+++.|+ |+|+++|...... . +...+..++.+.+++.
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~A 332 (363)
T 3dp7_A 254 MSQFLDCFSEEEVISILTRVAQSIG-KDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENA 332 (363)
T ss_dssp EESCSTTSCHHHHHHHHHHHHHHCC-TTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTT
T ss_pred EechhhhCCHHHHHHHHHHHHHhcC-CCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHc
Confidence 9999986543 4578899999998 8999888532110 0 1112578899999999
Q ss_pred CceeEEE
Q 024311 248 GIFGAHL 254 (269)
Q Consensus 248 g~~~~~~ 254 (269)
||-..++
T Consensus 333 Gf~~v~~ 339 (363)
T 3dp7_A 333 GLEVEEI 339 (363)
T ss_dssp TEEESCC
T ss_pred CCeEEEE
Confidence 9754444
No 155
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.97 E-value=2.8e-09 Score=97.78 Aligned_cols=39 Identities=21% Similarity=0.383 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~ 73 (269)
.+.+|||||||+|..++.++..++ .+|+++|+++.+++.
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~ 235 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEA 235 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHH
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHH
Confidence 356999999999999999888775 389999999999843
No 156
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.97 E-value=6.9e-09 Score=93.97 Aligned_cols=41 Identities=12% Similarity=0.040 Sum_probs=34.1
Q ss_pred CCCccEEEEecccc---ccCCHHHHHHHHHHhcCCCCeEEEEEEc
Q 024311 186 EGGYDVILLTEIPY---SVTSLKKLYLLIKKCLRPPYGVVYLATK 227 (269)
Q Consensus 186 ~~~fDlIlasD~iY---~~~~~~~L~~~l~~~L~~p~g~~~va~k 227 (269)
.++||+|++..+++ ++.....+++.+.++|+ |+|++++++.
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lk-pGG~~i~~~~ 170 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTA-SGGKVLITTM 170 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcC-CCCEEEEEeC
Confidence 45899999998884 33567899999999999 9999988764
No 157
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.96 E-value=7.4e-09 Score=88.23 Aligned_cols=136 Identities=18% Similarity=0.165 Sum_probs=87.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||+|||+|..++.++.. + ..+|+++|+++++++ ..+.|+..+. ...++++.
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~-----~a~~~~~~~~-----------------~~~~v~~~ 121 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTA-----LAKEYWEKAG-----------------LSDKIGLR 121 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHH-----HHHHHHHHTT-----------------CTTTEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHH-----HHHHHHHHCC-----------------CCCceEEE
Confidence 5779999999999999888765 2 459999999999984 3445553320 22356776
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+... . + ......++||+|
T Consensus 122 ~~d~~~~~~---~--------------------------------------------~----------~~~~~~~~fD~v 144 (225)
T 3tr6_A 122 LSPAKDTLA---E--------------------------------------------L----------IHAGQAWQYDLI 144 (225)
T ss_dssp ESCHHHHHH---H--------------------------------------------H----------HTTTCTTCEEEE
T ss_pred eCCHHHHHH---H--------------------------------------------h----------hhccCCCCccEE
Confidence 666432110 0 0 000122689999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc----------CcchHHHHHHhhhcCceeEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF----------NNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~----------~~~~~~F~~~~~~~g~~~~~~ 254 (269)
+. |. ....+..+++.+.++|+ |+|++++..-. +.|. ...+.+|.+.+....-+...+
T Consensus 145 ~~-~~--~~~~~~~~l~~~~~~L~-pgG~lv~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 211 (225)
T 3tr6_A 145 YI-DA--DKANTDLYYEESLKLLR-EGGLIAVDNVL-RRGQVADEENQSENNQLIRLFNQKVYKDERVDMIL 211 (225)
T ss_dssp EE-CS--CGGGHHHHHHHHHHHEE-EEEEEEEECSS-GGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EE-CC--CHHHHHHHHHHHHHhcC-CCcEEEEeCCC-cCCcccCccccChHHHHHHHHHHHHhcCCCeEEEE
Confidence 94 33 24567888999999999 89988875322 1121 014678888888765444444
No 158
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.96 E-value=1e-08 Score=89.95 Aligned_cols=157 Identities=14% Similarity=0.129 Sum_probs=96.5
Q ss_pred CceeeccHH-HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc-CC-CeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 9 FLKCWESSI-DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK-GA-GTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 9 G~~vW~as~-~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~-ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
++++|+--. -||..|..-.. .-..-.|.+|||||||+|.....+|.. |. .+|++.|+++++++. ++.|...
T Consensus 51 e~r~w~p~rsklaa~i~~gl~-~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~-----l~~~a~~ 124 (233)
T 4df3_A 51 EYREWNAYRSKLAAALLKGLI-ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRD-----LLTVVRD 124 (233)
T ss_dssp EEEECCTTTCHHHHHHHTTCS-CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHH-----HHHHSTT
T ss_pred eeeeECCCchHHHHHHHhchh-hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHH-----HHHhhHh
Confidence 688998655 45555544321 112447899999999999988777753 43 589999999999843 3333210
Q ss_pred hhhhhccCCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCccc
Q 024311 86 ARERQSRQPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSR 165 (269)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 165 (269)
.+++..+.+|-.....
T Consensus 125 --------------------~~ni~~V~~d~~~p~~-------------------------------------------- 140 (233)
T 4df3_A 125 --------------------RRNIFPILGDARFPEK-------------------------------------------- 140 (233)
T ss_dssp --------------------CTTEEEEESCTTCGGG--------------------------------------------
T ss_pred --------------------hcCeeEEEEeccCccc--------------------------------------------
Confidence 1234444333222110
Q ss_pred ccccccCchhhhhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc-Ccch---HHHH
Q 024311 166 RSRKLSGSRAWERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF-NNAA---RHLR 241 (269)
Q Consensus 166 ~~~~l~gs~~W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~-~~~~---~~F~ 241 (269)
.......+|+|+. |+ +.+...+.++..+++.|+ |+|+++|+.+.+-... .... .+=.
T Consensus 141 ----------------~~~~~~~vDvVf~-d~-~~~~~~~~~l~~~~r~LK-pGG~lvI~ik~r~~d~~~p~~~~~~~ev 201 (233)
T 4df3_A 141 ----------------YRHLVEGVDGLYA-DV-AQPEQAAIVVRNARFFLR-DGGYMLMAIKARSIDVTTEPSEVYKREI 201 (233)
T ss_dssp ----------------GTTTCCCEEEEEE-CC-CCTTHHHHHHHHHHHHEE-EEEEEEEEEECCHHHHHTCCCHHHHHHH
T ss_pred ----------------cccccceEEEEEE-ec-cCChhHHHHHHHHHHhcc-CCCEEEEEEecccCCCCCChHHHHHHHH
Confidence 0023458999985 65 456667788899999999 9999998865543211 1111 2335
Q ss_pred HHhhhcCceeEEE
Q 024311 242 SLVDEEGIFGAHL 254 (269)
Q Consensus 242 ~~~~~~g~~~~~~ 254 (269)
+.+++.||--.+.
T Consensus 202 ~~L~~~GF~l~e~ 214 (233)
T 4df3_A 202 KTLMDGGLEIKDV 214 (233)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHCCCEEEEE
Confidence 5667789744443
No 159
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.95 E-value=1.4e-08 Score=89.51 Aligned_cols=128 Identities=16% Similarity=0.165 Sum_probs=84.0
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
..+.+|||+|||+|..++.++.. + ..+|++.|+++++++. .+.|+..+. . .+..++++
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~-----a~~~~~~~~---g------------~~~~~v~~ 157 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEH-----ARRNVSGCY---G------------QPPDNWRL 157 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHH-----HHHHHHHHH---T------------SCCTTEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHH-----HHHHHHHhc---C------------CCCCcEEE
Confidence 46789999999999999887764 3 4599999999999844 344443210 0 00124555
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccE
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDV 191 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDl 191 (269)
..+|..+.+ ....+||+
T Consensus 158 ~~~d~~~~~---------------------------------------------------------------~~~~~~D~ 174 (280)
T 1i9g_A 158 VVSDLADSE---------------------------------------------------------------LPDGSVDR 174 (280)
T ss_dssp ECSCGGGCC---------------------------------------------------------------CCTTCEEE
T ss_pred EECchHhcC---------------------------------------------------------------CCCCceeE
Confidence 544433210 12457999
Q ss_pred EEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhh-cCceeEEEE
Q 024311 192 ILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDE-EGIFGAHLI 255 (269)
Q Consensus 192 IlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~-~g~~~~~~~ 255 (269)
|++ + ......+++.+.++|+ |+|++++..... ....++++.+++ .++...+++
T Consensus 175 v~~-~----~~~~~~~l~~~~~~L~-pgG~l~~~~~~~-----~~~~~~~~~l~~~~~f~~~~~~ 228 (280)
T 1i9g_A 175 AVL-D----MLAPWEVLDAVSRLLV-AGGVLMVYVATV-----TQLSRIVEALRAKQCWTEPRAW 228 (280)
T ss_dssp EEE-E----SSCGGGGHHHHHHHEE-EEEEEEEEESSH-----HHHHHHHHHHHHHSSBCCCEEE
T ss_pred EEE-C----CcCHHHHHHHHHHhCC-CCCEEEEEeCCH-----HHHHHHHHHHHhcCCcCCcEEE
Confidence 998 3 3345577888899998 899988876543 246677777777 566544443
No 160
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.94 E-value=3.8e-09 Score=99.34 Aligned_cols=46 Identities=24% Similarity=0.146 Sum_probs=38.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQA 86 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~ 86 (269)
.|++|||+|||+|..++.++..|+. |++.|+++.+++. .+.|+..|
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~-----a~~n~~~n 259 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGV-----LDQAALRL 259 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHH-----HHHHHHHH
T ss_pred CCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHH-----HHHHHHHh
Confidence 3899999999999999999999985 9999999999944 45555444
No 161
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.94 E-value=1.3e-08 Score=95.29 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=52.4
Q ss_pred CCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcc-------cccc-------cCcchHHHHHHhhhcCcee
Q 024311 186 EGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKK-------NYVG-------FNNAARHLRSLVDEEGIFG 251 (269)
Q Consensus 186 ~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~-------~~fg-------~~~~~~~F~~~~~~~g~~~ 251 (269)
.++||+|++..++++..+...+++.++++|+ |+|++++.... ..|. ..-+...+...+++.||-.
T Consensus 169 ~~~fD~I~~~~vl~h~~d~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~ 247 (416)
T 4e2x_A 169 EGPANVIYAANTLCHIPYVQSVLEGVDALLA-PDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFEL 247 (416)
T ss_dssp HCCEEEEEEESCGGGCTTHHHHHHHHHHHEE-EEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEE
T ss_pred CCCEEEEEECChHHhcCCHHHHHHHHHHHcC-CCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEE
Confidence 4689999999999999999999999999999 89999987532 0010 0014578889999999754
Q ss_pred EEE
Q 024311 252 AHL 254 (269)
Q Consensus 252 ~~~ 254 (269)
.++
T Consensus 248 ~~~ 250 (416)
T 4e2x_A 248 VDV 250 (416)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 162
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.94 E-value=2.2e-08 Score=87.76 Aligned_cols=54 Identities=17% Similarity=0.181 Sum_probs=37.5
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIR 72 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~ 72 (269)
.++..|..... .-..-.|.+|||||||+|.....++.. + ..+|++.|+++.+++
T Consensus 60 kla~~ll~~l~-~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~ 115 (232)
T 3id6_C 60 KLAGAILKGLK-TNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVR 115 (232)
T ss_dssp HHHHHHHTTCS-CCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHH
T ss_pred HHHHHHHhhhh-hcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHH
Confidence 35555544321 112346889999999999888666643 3 358999999999873
No 163
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.94 E-value=1.3e-08 Score=88.75 Aligned_cols=47 Identities=11% Similarity=0.151 Sum_probs=37.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHHhhHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRCTTVPNVLAN 82 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~~~~~Nl~~N 82 (269)
++.+|||+|||+|..++.++..++ .+|++.|+++.+++.+ ..|+..|
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a-~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYV-EDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHH-HHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHH-HHHHHHH
Confidence 678999999999999999888765 3899999999998543 2444433
No 164
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.94 E-value=3.4e-09 Score=98.81 Aligned_cols=122 Identities=21% Similarity=0.232 Sum_probs=82.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.+.+|||+|||+|..++.++.. +.+|+++|.++.+++ ..+.|+..|. + .+++++.+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~-----~a~~n~~~n~-----------------~-~~~~~~~~ 264 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALR-----RAEENARLNG-----------------L-GNVRVLEA 264 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHH-----HHHHHHHHTT-----------------C-TTEEEEES
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHH-----HHHHHHHHcC-----------------C-CCceEEEC
Confidence 6789999999999999998887 669999999999984 4455554431 1 13666666
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|..+... .+ .....+||+|+.
T Consensus 265 d~~~~~~-----------------------------------------------------~~------~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 265 NAFDLLR-----------------------------------------------------RL------EKEGERFDLVVL 285 (382)
T ss_dssp CHHHHHH-----------------------------------------------------HH------HHTTCCEEEEEE
T ss_pred CHHHHHH-----------------------------------------------------HH------HhcCCCeeEEEE
Confidence 5433110 00 012458999997
Q ss_pred ecccccc----------CCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhh
Q 024311 195 TEIPYSV----------TSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVD 245 (269)
Q Consensus 195 sD~iY~~----------~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~ 245 (269)
|..|.. ..+..++..+.++|+ |+|++++++....+ ....|.+.++
T Consensus 286 -dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~----~~~~~~~~i~ 340 (382)
T 1wxx_A 286 -DPPAFAKGKKDVERAYRAYKEVNLRAIKLLK-EGGILATASCSHHM----TEPLFYAMVA 340 (382)
T ss_dssp -CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEE-EEEEEEEEECCTTS----CHHHHHHHHH
T ss_pred -CCCCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCCCC----CHHHHHHHHH
Confidence 766644 335567777888898 89999998776544 2344554443
No 165
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.93 E-value=2.1e-08 Score=84.15 Aligned_cols=40 Identities=25% Similarity=0.410 Sum_probs=35.4
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
..+.+|||+|||+|..++.++..|+.+|++.|+++.+++.
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~ 89 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIET 89 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHH
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHH
Confidence 4678999999999999999888887789999999998843
No 166
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.93 E-value=1.1e-08 Score=86.72 Aligned_cols=128 Identities=14% Similarity=0.161 Sum_probs=81.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||+|||+|..++.++.. + ..+|+++|+++.+++. .+.|+..+. ...++++.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~-----a~~~~~~~~-----------------~~~~v~~~ 113 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEH-----ARRMLHDNG-----------------LIDRVELQ 113 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHH-----HHHHHHHHS-----------------GGGGEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHH-----HHHHHHHCC-----------------CCceEEEE
Confidence 5679999999999999887765 2 3489999999999854 344443220 11245555
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+.. ....+ ||+|
T Consensus 114 ~~d~~~~~--------------------------------------------------------------~~~~~-fD~v 130 (210)
T 3c3p_A 114 VGDPLGIA--------------------------------------------------------------AGQRD-IDIL 130 (210)
T ss_dssp ESCHHHHH--------------------------------------------------------------TTCCS-EEEE
T ss_pred EecHHHHh--------------------------------------------------------------ccCCC-CCEE
Confidence 55432210 01234 9999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccc---------cCcchHHHHHHhhhcCceeE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVG---------FNNAARHLRSLVDEEGIFGA 252 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg---------~~~~~~~F~~~~~~~g~~~~ 252 (269)
+.. ......+.+++.+.++|+ |+|++++..- .+.| ....+.+|.+.+.+..-+..
T Consensus 131 ~~~---~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 194 (210)
T 3c3p_A 131 FMD---CDVFNGADVLERMNRCLA-KNALLIAVNA-LRRGSVAESHEDPETAALREFNHHLSRRRDFFT 194 (210)
T ss_dssp EEE---TTTSCHHHHHHHHGGGEE-EEEEEEEESS-SSCC------------CCCHHHHHHTTCTTEEE
T ss_pred EEc---CChhhhHHHHHHHHHhcC-CCeEEEEECc-cccCcccCcccchHHHHHHHHHHHHhhCCCeEE
Confidence 974 335678889999999999 8998887432 1111 11246778888876543333
No 167
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.93 E-value=1.9e-08 Score=90.88 Aligned_cols=150 Identities=17% Similarity=0.181 Sum_probs=87.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
+.++|||||||+|..+..+++. +..+|++.|+++.+++.+ +.|+..... . . ...++++++.
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~a-----r~~~~~~~~--~-----~------~~~~rv~~~~ 144 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFC-----RQYLPNHNA--G-----S------YDDPRFKLVI 144 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHH-----HHHCHHHHS--S-----C------TTCTTCCEEC
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHH-----HHhhhhccc--c-----c------ccCCceEEEE
Confidence 4679999999999999887776 456899999999999654 333322100 0 0 0123556655
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..... ....++||+||
T Consensus 145 ~D~~~~l--------------------------------------------------------------~~~~~~fDvIi 162 (294)
T 3adn_A 145 DDGVNFV--------------------------------------------------------------NQTSQTFDVII 162 (294)
T ss_dssp SCSCC-----------------------------------------------------------------CCCCCEEEEE
T ss_pred ChHHHHH--------------------------------------------------------------hhcCCCccEEE
Confidence 5543310 01345899999
Q ss_pred E--eccccccCCH--HHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEEEe-eec--CcceEEE
Q 024311 194 L--TEIPYSVTSL--KKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHLIK-EMT--DRDIWKF 266 (269)
Q Consensus 194 a--sD~iY~~~~~--~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~~~-~~~--~~~i~~~ 266 (269)
. .|-......+ ..+++.++++|+ |+|++.+-+...++ ...........+++. |-.+.... ... .++.|.|
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~Lk-pgG~lv~~~~s~~~-~~~~~~~~~~~l~~~-F~~v~~~~~~vp~~p~g~~~f 239 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLN-PGGIFVAQNGVCFL-QQEEAIDSHRKLSHY-FSDVGFYQAAIPTYYGGIMTF 239 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEE-EEEEEEEEEEECSS-CCHHHHHHHHHHHHH-CSEEEEEEEECTTSSSSEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcC-CCCEEEEecCCccc-chHHHHHHHHHHHHH-CCCeEEEEEEecccCCCceEE
Confidence 8 3322111111 678899999999 89998876544332 123456666666665 22233222 222 3477776
Q ss_pred E
Q 024311 267 F 267 (269)
Q Consensus 267 ~ 267 (269)
.
T Consensus 240 ~ 240 (294)
T 3adn_A 240 A 240 (294)
T ss_dssp E
T ss_pred E
Confidence 4
No 168
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.93 E-value=1.3e-08 Score=92.85 Aligned_cols=132 Identities=16% Similarity=0.176 Sum_probs=91.1
Q ss_pred CCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 36 GKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
+.+|||+|||+|.....++... ..++++.|+ +++++ ..+.+.... ....++++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~-----~a~~~~~~~-----------------~~~~~v~~~~~ 236 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRD-----AARKTIHAH-----------------DLGGRVEFFEK 236 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHH-----HHHHHHHHT-----------------TCGGGEEEEEC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHH-----HHHHHHHhc-----------------CCCCceEEEeC
Confidence 7899999999999997777653 358999999 77773 344444321 01235777767
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|....+. ....+||+|++
T Consensus 237 d~~~~~~--------------------------------------------------------------~~~~~~D~v~~ 254 (352)
T 3mcz_A 237 NLLDARN--------------------------------------------------------------FEGGAADVVML 254 (352)
T ss_dssp CTTCGGG--------------------------------------------------------------GTTCCEEEEEE
T ss_pred CcccCcc--------------------------------------------------------------cCCCCccEEEE
Confidence 6554210 02346999999
Q ss_pred eccccccCC--HHHHHHHHHHhcCCCCeEEEEEEccc--------------------c-cccCcchHHHHHHhhhcCcee
Q 024311 195 TEIPYSVTS--LKKLYLLIKKCLRPPYGVVYLATKKN--------------------Y-VGFNNAARHLRSLVDEEGIFG 251 (269)
Q Consensus 195 sD~iY~~~~--~~~L~~~l~~~L~~p~g~~~va~k~~--------------------~-fg~~~~~~~F~~~~~~~g~~~ 251 (269)
+.++++... ...+++.+++.|+ |+|+++|..... . -|...+..++.+.+++.||-.
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 333 (352)
T 3mcz_A 255 NDCLHYFDAREAREVIGHAAGLVK-PGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAV 333 (352)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHTEE-EEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEE
T ss_pred ecccccCCHHHHHHHHHHHHHHcC-CCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCce
Confidence 999987654 4789999999998 899998864210 0 122235788999999999854
Q ss_pred EE
Q 024311 252 AH 253 (269)
Q Consensus 252 ~~ 253 (269)
.+
T Consensus 334 ~~ 335 (352)
T 3mcz_A 334 GE 335 (352)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 169
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.93 E-value=1.9e-08 Score=102.05 Aligned_cols=126 Identities=14% Similarity=0.106 Sum_probs=86.0
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCC--CeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCC
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGA--GTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPE 95 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga--~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~ 95 (269)
...+++..... ...+.+|||||||+|..++.++..++ .+|++.|+++.+++.+ +.++........
T Consensus 708 qRle~LLelL~----~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~A-----ReRLa~~lnAkr---- 774 (950)
T 3htx_A 708 QRVEYALKHIR----ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARA-----AKMLHVKLNKEA---- 774 (950)
T ss_dssp HHHHHHHHHHH----HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHH-----HHHHHHHTTTTC----
T ss_pred HHHHHHHHHhc----ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHH-----HHHhhhccchhh----
Confidence 34445544432 12688999999999999999998873 5899999999999553 222221100000
Q ss_pred CCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchh
Q 024311 96 SSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRA 175 (269)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~ 175 (269)
...++++|+.+|....+
T Consensus 775 --------~gl~nVefiqGDa~dLp------------------------------------------------------- 791 (950)
T 3htx_A 775 --------CNVKSATLYDGSILEFD------------------------------------------------------- 791 (950)
T ss_dssp --------SSCSEEEEEESCTTSCC-------------------------------------------------------
T ss_pred --------cCCCceEEEECchHhCC-------------------------------------------------------
Confidence 01246788777766532
Q ss_pred hhhhcccccCCCCccEEEEeccccccCCHH--HHHHHHHHhcCCCCeEEEEEEccc
Q 024311 176 WERASEADQGEGGYDVILLTEIPYSVTSLK--KLYLLIKKCLRPPYGVVYLATKKN 229 (269)
Q Consensus 176 W~~~~~~~~~~~~fDlIlasD~iY~~~~~~--~L~~~l~~~L~~p~g~~~va~k~~ 229 (269)
...++||+|++.+++.+..... .+++.+.++|+ |+ .++|.+..+
T Consensus 792 --------~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLK-PG-~LIISTPN~ 837 (950)
T 3htx_A 792 --------SRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFH-PK-LLIVSTPNY 837 (950)
T ss_dssp --------TTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTC-CS-EEEEEECBG
T ss_pred --------cccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcC-CC-EEEEEecCc
Confidence 1345899999999999877644 48899999999 76 777776543
No 170
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.93 E-value=7.9e-09 Score=89.34 Aligned_cols=131 Identities=20% Similarity=0.175 Sum_probs=85.1
Q ss_pred CCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCC-Ceeeee
Q 024311 36 GKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLA-PSVHFY 112 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~ 112 (269)
+.+|||||||+|..++.++.. + ..+|++.|.++++++. .+.|+..+. .. .++++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~-----a~~~~~~~g-----------------~~~~~i~~~ 114 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQ-----AKALFREAG-----------------YSPSRVRFL 114 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHH-----HHHHHHHTT-----------------CCGGGEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHH-----HHHHHHHcC-----------------CCcCcEEEE
Confidence 449999999999999887763 2 3589999999999843 455554321 22 356666
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+.. + ....++||+|
T Consensus 115 ~gda~~~l--------------------------------------------------~-----------~~~~~~fD~V 133 (221)
T 3dr5_A 115 LSRPLDVM--------------------------------------------------S-----------RLANDSYQLV 133 (221)
T ss_dssp CSCHHHHG--------------------------------------------------G-----------GSCTTCEEEE
T ss_pred EcCHHHHH--------------------------------------------------H-----------HhcCCCcCeE
Confidence 55533210 0 0124689999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc------Cc----chHHHHHHhhhcCceeEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF------NN----AARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~------~~----~~~~F~~~~~~~g~~~~~~ 254 (269)
+. |. ....+..+++.+.++|+ |+|++++..-. +.|. .+ .+.+|.+++++..-+.+.+
T Consensus 134 ~~-d~--~~~~~~~~l~~~~~~Lk-pGG~lv~dn~~-~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 200 (221)
T 3dr5_A 134 FG-QV--SPMDLKALVDAAWPLLR-RGGALVLADAL-LDGTIADQTRKDRDTQAARDADEYIRSIEGAHVAR 200 (221)
T ss_dssp EE-CC--CTTTHHHHHHHHHHHEE-EEEEEEETTTT-GGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred EE-cC--cHHHHHHHHHHHHHHcC-CCcEEEEeCCC-CCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEE
Confidence 97 43 34567788999999999 88988874322 1111 11 3578999988765444444
No 171
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.92 E-value=1.2e-08 Score=92.55 Aligned_cols=101 Identities=16% Similarity=0.235 Sum_probs=71.3
Q ss_pred CCCCEEEEEcCCCC-HHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 34 FRGKRVLELSCGYG-LPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 34 ~~~~~VLELGcGtG-l~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
-.+.+|||+|||+| +.++.+++....+|++.|+++++++.+ +.|+... .+ .+++|.
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~A-----r~~~~~~-----------------gl-~~v~~v 177 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELS-----RKVIEGL-----------------GV-DGVNVI 177 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHH-----HHHHHHH-----------------TC-CSEEEE
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHH-----HHHHHhc-----------------CC-CCeEEE
Confidence 47889999999997 566777764334899999999999543 3444321 02 356665
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|-.+. ...+||+|
T Consensus 178 ~gDa~~l-----------------------------------------------------------------~d~~FDvV 192 (298)
T 3fpf_A 178 TGDETVI-----------------------------------------------------------------DGLEFDVL 192 (298)
T ss_dssp ESCGGGG-----------------------------------------------------------------GGCCCSEE
T ss_pred ECchhhC-----------------------------------------------------------------CCCCcCEE
Confidence 5542211 13589999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
+.+-. ....+.+++.+.+.|+ |+|++++..
T Consensus 193 ~~~a~---~~d~~~~l~el~r~Lk-PGG~Lvv~~ 222 (298)
T 3fpf_A 193 MVAAL---AEPKRRVFRNIHRYVD-TETRIIYRT 222 (298)
T ss_dssp EECTT---CSCHHHHHHHHHHHCC-TTCEEEEEE
T ss_pred EECCC---ccCHHHHHHHHHHHcC-CCcEEEEEc
Confidence 97544 4678899999999999 899988764
No 172
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.92 E-value=1.6e-08 Score=85.55 Aligned_cols=40 Identities=23% Similarity=0.184 Sum_probs=33.5
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcC-C-CeEEEEeCCHHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKG-A-GTVHFQDLSAETIRC 73 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~g-a-~~Vv~tD~~~~vl~~ 73 (269)
..+.+|||+|||+|..++.++..+ + .+|+++|.++.+++.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~ 117 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEK 117 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHH
Confidence 467899999999999998777654 2 589999999999844
No 173
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.92 E-value=6.1e-09 Score=88.46 Aligned_cols=38 Identities=16% Similarity=0.119 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIR 72 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~ 72 (269)
.+.+|||+|||+|..++.++... ..+|+++|+++.+++
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~ 65 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRME 65 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGH
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHH
Confidence 57799999999999998888764 358999999999874
No 174
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.91 E-value=2.1e-08 Score=90.69 Aligned_cols=55 Identities=16% Similarity=0.126 Sum_probs=45.3
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHH
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
.+++-|.+.|... .....|++|||+|||||..+..++..|+.+|++.|.++.+|.
T Consensus 68 rg~~Kl~~~l~~~----~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~ 122 (291)
T 3hp7_A 68 RGGLKLEKALAVF----NLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLV 122 (291)
T ss_dssp TTHHHHHHHHHHT----TCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSC
T ss_pred chHHHHHHHHHhc----CCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHH
Confidence 5666677777654 245689999999999999998888889889999999998873
No 175
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.90 E-value=1.1e-08 Score=91.77 Aligned_cols=79 Identities=20% Similarity=0.281 Sum_probs=53.9
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccC
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQ 93 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~ 93 (269)
+.+..|++++.+... ...+.+|||+|||+|..++.++..+..+|+++|+++++++. .+.|...+.
T Consensus 106 ~~te~lv~~~l~~~~----~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~-----A~~n~~~~~------ 170 (284)
T 1nv8_A 106 PETEELVELALELIR----KYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEI-----ARKNAERHG------ 170 (284)
T ss_dssp TTHHHHHHHHHHHHH----HHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHH-----HHHHHHHTT------
T ss_pred hhHHHHHHHHHHHhc----ccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHH-----HHHHHHHcC------
Confidence 344566776665432 11467999999999999998887743589999999999944 445554321
Q ss_pred CCCCCCCCccCCCCeeeeecCCCCC
Q 024311 94 PESSLTPSRQTLAPSVHFYAGDWEE 118 (269)
Q Consensus 94 ~~~~~~~~~~~~~~~v~~~~~dw~~ 118 (269)
+..+++|+.+||..
T Consensus 171 -----------l~~~v~~~~~D~~~ 184 (284)
T 1nv8_A 171 -----------VSDRFFVRKGEFLE 184 (284)
T ss_dssp -----------CTTSEEEEESSTTG
T ss_pred -----------CCCceEEEECcchh
Confidence 22347787777664
No 176
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.90 E-value=1.5e-08 Score=86.68 Aligned_cols=55 Identities=16% Similarity=0.175 Sum_probs=40.6
Q ss_pred eccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 13 WESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 13 W~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
|... .+++++.... ....+.+|||+|||+|..++.++..+ .+|+++|+++.+++.
T Consensus 53 ~~~~-~~~~~~~~~~----~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~ 107 (231)
T 1vbf_A 53 TTAL-NLGIFMLDEL----DLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNY 107 (231)
T ss_dssp ECCH-HHHHHHHHHT----TCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHH
T ss_pred cCCH-HHHHHHHHhc----CCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHH
Confidence 4443 3444454442 13367899999999999998888877 599999999998843
No 177
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.90 E-value=2.6e-09 Score=95.40 Aligned_cols=65 Identities=12% Similarity=0.180 Sum_probs=50.0
Q ss_pred CCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccc-------c------cc-----cCcchHHHHHHhhhc
Q 024311 186 EGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKN-------Y------VG-----FNNAARHLRSLVDEE 247 (269)
Q Consensus 186 ~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~-------~------fg-----~~~~~~~F~~~~~~~ 247 (269)
.++||+|+++.++++..+.+..++.++++|+ |+|+++++.... + ++ ..-+..++...+++.
T Consensus 133 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 211 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVKDIPATLKFFHSLLG-TNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNL 211 (292)
T ss_dssp CCCEEEEEEESCGGGCSCHHHHHHHHHHTEE-EEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHHH
T ss_pred CCceeEEEEeeeeeecCCHHHHHHHHHHHcC-CCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHHC
Confidence 4689999999999999999999999999999 899988863211 0 00 012356778889999
Q ss_pred Ccee
Q 024311 248 GIFG 251 (269)
Q Consensus 248 g~~~ 251 (269)
||-.
T Consensus 212 Gf~~ 215 (292)
T 2aot_A 212 GLKY 215 (292)
T ss_dssp TCCE
T ss_pred CCce
Confidence 9743
No 178
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.89 E-value=4e-09 Score=92.08 Aligned_cols=56 Identities=21% Similarity=0.227 Sum_probs=45.4
Q ss_pred eccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHH
Q 024311 13 WESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 13 W~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
-.++..|.+.|... ....++++|||||||||..+..++..|+.+|++.|+++.+++
T Consensus 19 srg~~kL~~~L~~~----~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~ 74 (232)
T 3opn_A 19 SRGGLKLEKALKEF----HLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLA 74 (232)
T ss_dssp STTHHHHHHHHHHT----TCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCC
T ss_pred CCcHHHHHHHHHHc----CCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHH
Confidence 35666777777654 235578999999999999998888888789999999998873
No 179
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.89 E-value=4.8e-09 Score=89.64 Aligned_cols=38 Identities=16% Similarity=0.370 Sum_probs=33.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc--CCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK--GAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~--ga~~Vv~tD~~~~vl~~ 73 (269)
...+|||||||+|.+++.++.. ++ +|+++|+|+.+++.
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~lei 88 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAF 88 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHH
Confidence 4669999999999999988765 55 99999999999954
No 180
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.89 E-value=1.5e-08 Score=93.19 Aligned_cols=119 Identities=23% Similarity=0.134 Sum_probs=81.0
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcC--CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCC
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKG--AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPE 95 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~g--a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~ 95 (269)
.|+..+.... ..-.+.+|||+|||+|...+.++..+ ..+|++.|+++.+++ ..+.|+..+.
T Consensus 190 ~la~~l~~~~----~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~-----~a~~n~~~~g-------- 252 (354)
T 3tma_A 190 VLAQALLRLA----DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLG-----LAREAALASG-------- 252 (354)
T ss_dssp HHHHHHHHHT----TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHH-----HHHHHHHHTT--------
T ss_pred HHHHHHHHHh----CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHH-----HHHHHHHHcC--------
Confidence 4566555542 12367899999999999999888754 358999999999994 4556664421
Q ss_pred CCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchh
Q 024311 96 SSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRA 175 (269)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~ 175 (269)
+. ++++..+|..+.+
T Consensus 253 ---------~~-~i~~~~~D~~~~~------------------------------------------------------- 267 (354)
T 3tma_A 253 ---------LS-WIRFLRADARHLP------------------------------------------------------- 267 (354)
T ss_dssp ---------CT-TCEEEECCGGGGG-------------------------------------------------------
T ss_pred ---------CC-ceEEEeCChhhCc-------------------------------------------------------
Confidence 12 4566656544321
Q ss_pred hhhhcccccCCCCccEEEEeccccccCC---------HHHHHHHHHHhcCCCCeEEEEEEcc
Q 024311 176 WERASEADQGEGGYDVILLTEIPYSVTS---------LKKLYLLIKKCLRPPYGVVYLATKK 228 (269)
Q Consensus 176 W~~~~~~~~~~~~fDlIlasD~iY~~~~---------~~~L~~~l~~~L~~p~g~~~va~k~ 228 (269)
.....||+|++ |..|.... +..+++.++++|+ |+|.+++.+..
T Consensus 268 --------~~~~~~D~Ii~-npPyg~r~~~~~~~~~~~~~~~~~~~~~Lk-pgG~l~i~t~~ 319 (354)
T 3tma_A 268 --------RFFPEVDRILA-NPPHGLRLGRKEGLFHLYWDFLRGALALLP-PGGRVALLTLR 319 (354)
T ss_dssp --------GTCCCCSEEEE-CCCSCC----CHHHHHHHHHHHHHHHHTSC-TTCEEEEEESC
T ss_pred --------cccCCCCEEEE-CCCCcCccCCcccHHHHHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 12235899997 66775433 3678889999998 88999888653
No 181
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.89 E-value=3.5e-08 Score=84.79 Aligned_cols=105 Identities=14% Similarity=0.196 Sum_probs=71.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
++.+|||+|||+|..++.++... ..+|+++|.++.+++. .+.|+..+. ...++++..
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~-----a~~~~~~~~-----------------~~~~v~~~~ 111 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEE-----AHKHVKALG-----------------LESRIELLF 111 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHH-----HHHHHHHTT-----------------CTTTEEEEC
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHH-----HHHHHHHcC-----------------CCCcEEEEE
Confidence 57799999999999998877652 3599999999998843 444543320 123466655
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|...... .....++||+|+
T Consensus 112 ~d~~~~~~------------------------------------------------------------~~~~~~~fD~I~ 131 (233)
T 2gpy_A 112 GDALQLGE------------------------------------------------------------KLELYPLFDVLF 131 (233)
T ss_dssp SCGGGSHH------------------------------------------------------------HHTTSCCEEEEE
T ss_pred CCHHHHHH------------------------------------------------------------hcccCCCccEEE
Confidence 55433100 000135899999
Q ss_pred EeccccccCCHHHHHHHHHHhcCCCCeEEEEE
Q 024311 194 LTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLA 225 (269)
Q Consensus 194 asD~iY~~~~~~~L~~~l~~~L~~p~g~~~va 225 (269)
..... .....+++.+.++|+ |+|++++.
T Consensus 132 ~~~~~---~~~~~~l~~~~~~L~-pgG~lv~~ 159 (233)
T 2gpy_A 132 IDAAK---GQYRRFFDMYSPMVR-PGGLILSD 159 (233)
T ss_dssp EEGGG---SCHHHHHHHHGGGEE-EEEEEEEE
T ss_pred ECCCH---HHHHHHHHHHHHHcC-CCeEEEEE
Confidence 85442 467888999999998 89998886
No 182
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.88 E-value=1e-08 Score=94.02 Aligned_cols=112 Identities=16% Similarity=0.161 Sum_probs=78.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecC
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAG 114 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 114 (269)
.|.+|||+|||+|..++. +. ++.+|++.|.++.+++ .++.|+..|. +..+++++.+
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~-----~a~~n~~~n~-----------------l~~~v~~~~~ 250 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIE-----LLKKNIKLNK-----------------LEHKIIPILS 250 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHH-----HHHHHHHHTT-----------------CTTTEEEEES
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHH-----HHHHHHHHcC-----------------CCCcEEEEEC
Confidence 688999999999999999 77 6779999999999984 4556665441 1234555545
Q ss_pred CCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEEE
Q 024311 115 DWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILL 194 (269)
Q Consensus 115 dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIla 194 (269)
|..+ .. .+||+|+.
T Consensus 251 D~~~-----------------------------------------------------------------~~-~~fD~Vi~ 264 (336)
T 2yx1_A 251 DVRE-----------------------------------------------------------------VD-VKGNRVIM 264 (336)
T ss_dssp CGGG-----------------------------------------------------------------CC-CCEEEEEE
T ss_pred ChHH-----------------------------------------------------------------hc-CCCcEEEE
Confidence 4321 01 58999998
Q ss_pred eccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhc
Q 024311 195 TEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEE 247 (269)
Q Consensus 195 sD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~ 247 (269)
|..|.. ..+++.+.++|+ |+|.+++.+.... ...+.+.+++.
T Consensus 265 -dpP~~~---~~~l~~~~~~L~-~gG~l~~~~~~~~------~~~~~~~l~~~ 306 (336)
T 2yx1_A 265 -NLPKFA---HKFIDKALDIVE-EGGVIHYYTIGKD------FDKAIKLFEKK 306 (336)
T ss_dssp -CCTTTG---GGGHHHHHHHEE-EEEEEEEEEEESS------SHHHHHHHHHH
T ss_pred -CCcHhH---HHHHHHHHHHcC-CCCEEEEEEeecC------chHHHHHHHHh
Confidence 655443 367778888898 8898777644321 45677777766
No 183
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.88 E-value=8.1e-09 Score=89.39 Aligned_cols=144 Identities=19% Similarity=0.262 Sum_probs=88.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC--CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG--AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g--a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||+|||+|..++.++... ..+|++.|+++.+++. .+.|+..+. ...++++.
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~-----a~~~~~~~g-----------------~~~~v~~~ 117 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNV-----ARKYWKENG-----------------LENKIFLK 117 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHH-----HHHHHHHTT-----------------CGGGEEEE
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHH-----HHHHHHHcC-----------------CCCCEEEE
Confidence 57799999999999998877652 3599999999998844 344443210 11246666
Q ss_pred cCCCCCc-chhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCC--CCc
Q 024311 113 AGDWEEL-PTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGE--GGY 189 (269)
Q Consensus 113 ~~dw~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~--~~f 189 (269)
.+|..+. +... .+ .. ...|...+ .. ++|
T Consensus 118 ~~d~~~~~~~~~----~~----------------------------------------~~-~~~~~~~f----~~~~~~f 148 (239)
T 2hnk_A 118 LGSALETLQVLI----DS----------------------------------------KS-APSWASDF----AFGPSSI 148 (239)
T ss_dssp ESCHHHHHHHHH----HC----------------------------------------SS-CCGGGTTT----CCSTTCE
T ss_pred ECCHHHHHHHHH----hh----------------------------------------cc-cccccccc----cCCCCCc
Confidence 6654331 1000 00 00 00143322 22 689
Q ss_pred cEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc----------CcchHHHHHHhhhcCceeEEE
Q 024311 190 DVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF----------NNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 190 DlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~----------~~~~~~F~~~~~~~g~~~~~~ 254 (269)
|+|+.. +....++.+++.+.++|+ |+|++++..-. +.|. ...+..|.+.+.....+.+..
T Consensus 149 D~I~~~---~~~~~~~~~l~~~~~~L~-pgG~lv~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (239)
T 2hnk_A 149 DLFFLD---ADKENYPNYYPLILKLLK-PGGLLIADNVL-WDGSVADLSHQEPSTVGIRKFNELVYNDSLVDVSL 218 (239)
T ss_dssp EEEEEC---SCGGGHHHHHHHHHHHEE-EEEEEEEECSS-GGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred CEEEEe---CCHHHHHHHHHHHHHHcC-CCeEEEEEccc-cCCcccCccccchHHHHHHHHHHHHhhCCCeEEEE
Confidence 999975 345667788999999998 89998876422 1120 013567888887766555544
No 184
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.88 E-value=3.1e-08 Score=92.11 Aligned_cols=58 Identities=19% Similarity=0.173 Sum_probs=43.3
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
.++..|.... ...+.+|||+|||+|...+.++..+. .+|+++|+++.+++. .+.|+..
T Consensus 205 ~la~~l~~~~-----~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~-----A~~n~~~ 263 (373)
T 3tm4_A 205 SIANAMIELA-----ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIG-----AEMNALA 263 (373)
T ss_dssp HHHHHHHHHH-----TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHH-----HHHHHHH
T ss_pred HHHHHHHHhh-----cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHH-----HHHHHHH
Confidence 4555554442 22578999999999999999998876 389999999999944 4555543
No 185
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.87 E-value=1.6e-09 Score=106.27 Aligned_cols=38 Identities=34% Similarity=0.460 Sum_probs=34.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
++.+|||+|||.|+.+..+|+.|+ +|++.|.++..|+.
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~ 103 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINV 103 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHH
Confidence 567999999999999999999999 89999999988743
No 186
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.86 E-value=1e-07 Score=88.21 Aligned_cols=138 Identities=17% Similarity=0.131 Sum_probs=94.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||+|||+|...+.++... ..++++.|+ +++++... ..++++|..
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----------------------------~~~~v~~~~ 252 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP-----------------------------AFSGVEHLG 252 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----------------------------CCTTEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh-----------------------------hcCCCEEEe
Confidence 46799999999999997776643 348999999 87763210 013566666
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+ + ... . |+|+
T Consensus 253 ~d~~~-~---------------------------------------------------------------~p~-~-D~v~ 266 (368)
T 3reo_A 253 GDMFD-G---------------------------------------------------------------VPK-G-DAIF 266 (368)
T ss_dssp CCTTT-C---------------------------------------------------------------CCC-C-SEEE
T ss_pred cCCCC-C---------------------------------------------------------------CCC-C-CEEE
Confidence 65432 1 011 2 9999
Q ss_pred EeccccccCC--HHHHHHHHHHhcCCCCeEEEEEEccc------------------------ccccCcchHHHHHHhhhc
Q 024311 194 LTEIPYSVTS--LKKLYLLIKKCLRPPYGVVYLATKKN------------------------YVGFNNAARHLRSLVDEE 247 (269)
Q Consensus 194 asD~iY~~~~--~~~L~~~l~~~L~~p~g~~~va~k~~------------------------~fg~~~~~~~F~~~~~~~ 247 (269)
.+.++++... ...+++.+++.|+ |+|+++|..... .-|...+..++.+.+++.
T Consensus 267 ~~~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~A 345 (368)
T 3reo_A 267 IKWICHDWSDEHCLKLLKNCYAALP-DHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMAS 345 (368)
T ss_dssp EESCGGGBCHHHHHHHHHHHHHHSC-TTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHT
T ss_pred EechhhcCCHHHHHHHHHHHHHHcC-CCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHC
Confidence 9999986654 3478999999998 899988863211 012223567899999999
Q ss_pred CceeEEEEeeecCcceEEEEeC
Q 024311 248 GIFGAHLIKEMTDRDIWKFFLK 269 (269)
Q Consensus 248 g~~~~~~~~~~~~~~i~~~~~~ 269 (269)
||-.+++..-.....|..+++|
T Consensus 346 GF~~v~~~~~~~~~~vie~~k~ 367 (368)
T 3reo_A 346 GFRGFKVASCAFNTYVMEFLKT 367 (368)
T ss_dssp TCCEEEEEEEETTEEEEEEECC
T ss_pred CCeeeEEEEeCCCcEEEEEEeC
Confidence 9977777665555566666654
No 187
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.85 E-value=1.1e-08 Score=89.09 Aligned_cols=46 Identities=15% Similarity=0.155 Sum_probs=36.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc---CCCeEEEEeCCHHHHHHhhHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK---GAGTVHFQDLSAETIRCTTVPNVLA 81 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~---ga~~Vv~tD~~~~vl~~~~~~Nl~~ 81 (269)
.+.+|||+|||+|..++.++.. +..+|+++|+++.+++.+ ..|+..
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A-~~~~~~ 99 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELA-AKNLAL 99 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHH-HHHHHT
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHH-HHHHHH
Confidence 5679999999999999887765 234899999999999654 344443
No 188
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.85 E-value=4.3e-08 Score=85.49 Aligned_cols=40 Identities=10% Similarity=0.065 Sum_probs=33.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~ 74 (269)
++.+|||||||+|...+.+|... ...|++.|+++.+++.+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A 86 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYV 86 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHH
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHH
Confidence 56799999999999998887753 35899999999998543
No 189
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.85 E-value=4.4e-08 Score=89.06 Aligned_cols=46 Identities=17% Similarity=0.259 Sum_probs=35.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc--CCCeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK--GAGTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~--ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
.|.+|||+|||+|..++.++.. +..+|++.|+++.+++ .++.|+..
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~-----~a~~~~~~ 165 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLR-----ETRLNLSR 165 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHH-----HHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHH-----HHHHHHHH
Confidence 5789999999999999877754 2358999999999884 44555543
No 190
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.84 E-value=6.4e-09 Score=91.06 Aligned_cols=136 Identities=19% Similarity=0.253 Sum_probs=87.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||+|||+|..++.++.. + ..+|++.|+++++++. .+.|+..+ .+..+++++
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~-----a~~~~~~~-----------------g~~~~i~~~ 117 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKH-----AHPYWREA-----------------KQEHKIKLR 117 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCC-----SHHHHHHT-----------------TCTTTEEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHH-----HHHHHHHc-----------------CCCCcEEEE
Confidence 5679999999999999888763 2 3489999999988743 33444322 022467777
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+... .... ....++||+|
T Consensus 118 ~gda~~~l~--------------------------------------------------------~~~~-~~~~~~fD~V 140 (242)
T 3r3h_A 118 LGPALDTLH--------------------------------------------------------SLLN-EGGEHQFDFI 140 (242)
T ss_dssp ESCHHHHHH--------------------------------------------------------HHHH-HHCSSCEEEE
T ss_pred EcCHHHHHH--------------------------------------------------------HHhh-ccCCCCEeEE
Confidence 666432110 0000 0014589999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc----------CcchHHHHHHhhhcCceeEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF----------NNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~----------~~~~~~F~~~~~~~g~~~~~~ 254 (269)
+. |.. ...+..+++.+.++|+ |+|++++..-. +.|. ...+.+|.+.+.+..-+.+.+
T Consensus 141 ~~-d~~--~~~~~~~l~~~~~~Lk-pGG~lv~d~~~-~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 207 (242)
T 3r3h_A 141 FI-DAD--KTNYLNYYELALKLVT-PKGLIAIDNIF-WDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSL 207 (242)
T ss_dssp EE-ESC--GGGHHHHHHHHHHHEE-EEEEEEEECSS-SSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEE
T ss_pred EE-cCC--hHHhHHHHHHHHHhcC-CCeEEEEECCc-cCCcccCccccChHHHHHHHHHHHHhhCCCEEEEE
Confidence 97 332 5567788889999998 89988875322 2221 013788999998876555544
No 191
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.84 E-value=2.3e-08 Score=90.68 Aligned_cols=52 Identities=21% Similarity=0.192 Sum_probs=38.5
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCC--CeEEEEeCCHHHHHH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGA--GTVHFQDLSAETIRC 73 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga--~~Vv~tD~~~~vl~~ 73 (269)
.+.+.+.... ....+.+|||+|||+|..++.++..+. .+|+++|+++++++.
T Consensus 62 ~~~~~l~~~l----~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~ 115 (317)
T 1dl5_A 62 SLMALFMEWV----GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEI 115 (317)
T ss_dssp HHHHHHHHHT----TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHH
T ss_pred HHHHHHHHhc----CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHH
Confidence 4444554442 123678999999999999988877654 369999999999843
No 192
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.84 E-value=4.4e-08 Score=89.72 Aligned_cols=68 Identities=16% Similarity=0.155 Sum_probs=51.7
Q ss_pred CccEEEEeccccccCCH--HHHHHHHHHhcCCCCeEEEEEEcccc-------------------cccCcchHHHHHHhhh
Q 024311 188 GYDVILLTEIPYSVTSL--KKLYLLIKKCLRPPYGVVYLATKKNY-------------------VGFNNAARHLRSLVDE 246 (269)
Q Consensus 188 ~fDlIlasD~iY~~~~~--~~L~~~l~~~L~~p~g~~~va~k~~~-------------------fg~~~~~~~F~~~~~~ 246 (269)
+||+|+++.++++.... ..+++.+++.|+ |+|+++|...... .|...+..++.+.+++
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~Lk-pgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~ 325 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMP-AHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTA 325 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCC-TTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHH
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcC-CCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHH
Confidence 89999999999988766 589999999998 8999988642110 0112357889999999
Q ss_pred cCceeEEEEe
Q 024311 247 EGIFGAHLIK 256 (269)
Q Consensus 247 ~g~~~~~~~~ 256 (269)
.||-..++..
T Consensus 326 aGf~~~~~~~ 335 (348)
T 3lst_A 326 AGLRLDRVVG 335 (348)
T ss_dssp TTEEEEEEEE
T ss_pred CCCceEEEEE
Confidence 9986666644
No 193
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.83 E-value=4.1e-08 Score=87.27 Aligned_cols=46 Identities=15% Similarity=0.249 Sum_probs=35.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHH--cCCCeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACL--KGAGTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~--~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
.|.+|||+|||+|..++.++. .+..+|++.|.++..++ .++.|+..
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~-----~~~~~~~~ 130 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTK-----ALKSNINR 130 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHH-----HHHHHHHH
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHH-----HHHHHHHH
Confidence 578999999999999977665 34469999999999884 44555543
No 194
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.83 E-value=1.8e-08 Score=88.32 Aligned_cols=39 Identities=23% Similarity=0.231 Sum_probs=32.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~ 73 (269)
.+.+|||+|||+|..+..++.. +..+|++.|.++.+++.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~ 124 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKA 124 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHH
Confidence 6789999999999999877765 23489999999998843
No 195
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.82 E-value=2.6e-08 Score=85.03 Aligned_cols=136 Identities=18% Similarity=0.168 Sum_probs=85.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||+|||+|..++.++.. + ..+|+++|.++.+++. .+.|+..+. ...++++.
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~-----a~~~~~~~g-----------------~~~~i~~~ 126 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPEL-----GRPLWRQAE-----------------AEHKIDLR 126 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHH-----HHHHHHHTT-----------------CTTTEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHH-----HHHHHHHCC-----------------CCCeEEEE
Confidence 6789999999999999888764 2 3599999999998844 344443220 12356666
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+... ..... ...++||+|
T Consensus 127 ~~d~~~~~~--------------------------------------------------------~~~~~-~~~~~~D~v 149 (229)
T 2avd_A 127 LKPALETLD--------------------------------------------------------ELLAA-GEAGTFDVA 149 (229)
T ss_dssp ESCHHHHHH--------------------------------------------------------HHHHT-TCTTCEEEE
T ss_pred EcCHHHHHH--------------------------------------------------------HHHhc-CCCCCccEE
Confidence 555432100 00000 012589999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc----------CcchHHHHHHhhhcCceeEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF----------NNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~----------~~~~~~F~~~~~~~g~~~~~~ 254 (269)
+. |.. ...+..+++.+.++|+ |+|++++..-. +.|. ...+.+|.+.+.+..-+.+.+
T Consensus 150 ~~-d~~--~~~~~~~l~~~~~~L~-pgG~lv~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 216 (229)
T 2avd_A 150 VV-DAD--KENCSAYYERCLQLLR-PGGILAVLRVL-WRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISL 216 (229)
T ss_dssp EE-CSC--STTHHHHHHHHHHHEE-EEEEEEEECCS-GGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EE-CCC--HHHHHHHHHHHHHHcC-CCeEEEEECCC-cCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEE
Confidence 98 332 4567788999999998 89988875321 1110 113578888887765444443
No 196
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.81 E-value=3.7e-08 Score=81.79 Aligned_cols=50 Identities=32% Similarity=0.270 Sum_probs=36.5
Q ss_pred cHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc-CC---------CeEEEEeCCH
Q 024311 15 SSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK-GA---------GTVHFQDLSA 68 (269)
Q Consensus 15 as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~-ga---------~~Vv~tD~~~ 68 (269)
++..|.+..... ...-.+.+|||||||+|..++.++.. ++ .+|++.|+++
T Consensus 6 ~~~kl~~l~~~~----~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~ 65 (196)
T 2nyu_A 6 SAFKLLEVNERH----QILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLH 65 (196)
T ss_dssp HHHHHHHHHHHH----CCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSC
T ss_pred HHHHHHHHHHhc----CCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechh
Confidence 344555554443 22346789999999999999887765 53 5899999987
No 197
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.81 E-value=8.8e-08 Score=87.22 Aligned_cols=40 Identities=25% Similarity=0.306 Sum_probs=34.7
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-CC-CeEEEEeCCHHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-GA-GTVHFQDLSAETIRC 73 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-ga-~~Vv~tD~~~~vl~~ 73 (269)
..+.+|||+|||+|..++.++.. |+ .+|++.|+++.+++.
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~ 145 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDL 145 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHH
Confidence 46889999999999999888875 65 699999999999854
No 198
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.81 E-value=1.4e-08 Score=89.05 Aligned_cols=109 Identities=16% Similarity=0.217 Sum_probs=72.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||+|||+|..++.++.. + ..+|++.|+++++++. .+.|+..+. +..+++++
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~-----a~~~~~~~g-----------------~~~~i~~~ 136 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYEL-----GLPVIKKAG-----------------VDHKIDFR 136 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHH-----HHHHHHHTT-----------------CGGGEEEE
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHH-----HHHHHHHcC-----------------CCCCeEEE
Confidence 5679999999999999887764 2 2489999999999844 444543320 12356776
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+.. + .........++||+|
T Consensus 137 ~gda~~~l--~------------------------------------------------------~l~~~~~~~~~fD~V 160 (247)
T 1sui_A 137 EGPALPVL--D------------------------------------------------------EMIKDEKNHGSYDFI 160 (247)
T ss_dssp ESCHHHHH--H------------------------------------------------------HHHHSGGGTTCBSEE
T ss_pred ECCHHHHH--H------------------------------------------------------HHHhccCCCCCEEEE
Confidence 66643310 0 000000014589999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLA 225 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va 225 (269)
+. |. ....+..+++.+.++|+ |+|++++.
T Consensus 161 ~~-d~--~~~~~~~~l~~~~~~Lk-pGG~lv~d 189 (247)
T 1sui_A 161 FV-DA--DKDNYLNYHKRLIDLVK-VGGVIGYD 189 (247)
T ss_dssp EE-CS--CSTTHHHHHHHHHHHBC-TTCCEEEE
T ss_pred EE-cC--chHHHHHHHHHHHHhCC-CCeEEEEe
Confidence 97 32 24568889999999998 89988765
No 199
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.79 E-value=6.1e-08 Score=92.22 Aligned_cols=41 Identities=20% Similarity=0.256 Sum_probs=35.2
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHh
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~ 74 (269)
..+.+|||||||+|..++.++.. |..+|++.|+++.+++.+
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A 282 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLT 282 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 36889999999999999888874 666899999999988654
No 200
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.79 E-value=6.1e-08 Score=84.25 Aligned_cols=137 Identities=17% Similarity=0.198 Sum_probs=85.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||+|||+|..++.++.. + ..+|++.|+++++++. .+.|+..+. ...++++.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~-----a~~~~~~~g-----------------~~~~i~~~ 127 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEI-----GLPFIRKAG-----------------VEHKINFI 127 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHH-----HHHHHHHTT-----------------CGGGEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHH-----HHHHHHHcC-----------------CCCcEEEE
Confidence 5779999999999999887764 2 3599999999999843 445553320 12356776
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+... . ........++||+|
T Consensus 128 ~gda~~~l~---~-----------------------------------------------------l~~~~~~~~~fD~I 151 (237)
T 3c3y_A 128 ESDAMLALD---N-----------------------------------------------------LLQGQESEGSYDFG 151 (237)
T ss_dssp ESCHHHHHH---H-----------------------------------------------------HHHSTTCTTCEEEE
T ss_pred EcCHHHHHH---H-----------------------------------------------------HHhccCCCCCcCEE
Confidence 666443100 0 00000014589999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc---------------CcchHHHHHHhhhcCceeEEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF---------------NNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~---------------~~~~~~F~~~~~~~g~~~~~~ 254 (269)
+. | .....+..+++.+.++|+ |+|++++..-. +.|. ...+.+|.+.+.+..-+...+
T Consensus 152 ~~-d--~~~~~~~~~l~~~~~~L~-pGG~lv~d~~~-~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~~~~~~~~~ 223 (237)
T 3c3y_A 152 FV-D--ADKPNYIKYHERLMKLVK-VGGIVAYDNTL-WGGTVAQPESEVPDFMKENREAVIELNKLLAADPRIEIVH 223 (237)
T ss_dssp EE-C--SCGGGHHHHHHHHHHHEE-EEEEEEEECTT-GGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EE-C--CchHHHHHHHHHHHHhcC-CCeEEEEecCC-cCCccCCCcccchhhHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 97 3 235567889999999998 89988775321 1110 012348888887765554444
No 201
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.78 E-value=4.8e-08 Score=84.23 Aligned_cols=54 Identities=15% Similarity=0.102 Sum_probs=39.7
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 16 SIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 16 s~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
...++..+.... ....+.+|||+|||+|..++.++..+..+|+++|+++.+++.
T Consensus 76 ~~~~~~~~~~~l----~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~ 129 (235)
T 1jg1_A 76 APHMVAIMLEIA----NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEF 129 (235)
T ss_dssp CHHHHHHHHHHH----TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHH
T ss_pred cHHHHHHHHHhc----CCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence 344555555543 133677999999999999988776643589999999998843
No 202
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.78 E-value=3.7e-08 Score=83.23 Aligned_cols=49 Identities=16% Similarity=0.097 Sum_probs=38.4
Q ss_pred cHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCH
Q 024311 15 SSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSA 68 (269)
Q Consensus 15 as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~ 68 (269)
|+.-|.+.+.+.. ..-++.+|||||||+|..++.++..++ +|++.|+++
T Consensus 9 a~~KL~ei~~~~~----~~~~g~~VLDlG~G~G~~s~~la~~~~-~V~gvD~~~ 57 (191)
T 3dou_A 9 AAFKLEFLLDRYR----VVRKGDAVIEIGSSPGGWTQVLNSLAR-KIISIDLQE 57 (191)
T ss_dssp HHHHHHHHHHHHC----CSCTTCEEEEESCTTCHHHHHHTTTCS-EEEEEESSC
T ss_pred HHHHHHHHHHHcC----CCCCCCEEEEEeecCCHHHHHHHHcCC-cEEEEeccc
Confidence 5666666665541 234688999999999999999888754 899999986
No 203
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.78 E-value=1.9e-07 Score=88.55 Aligned_cols=136 Identities=21% Similarity=0.229 Sum_probs=89.7
Q ss_pred HHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCC
Q 024311 16 SIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPE 95 (269)
Q Consensus 16 s~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~ 95 (269)
+..|.+++.+... ...+.+|||||||+|..++.++..+ .+|+++|+++++++ ..+.|+..+.
T Consensus 271 ~e~l~~~~~~~l~----~~~~~~VLDlgcG~G~~~~~la~~~-~~V~gvD~s~~al~-----~A~~n~~~~~-------- 332 (433)
T 1uwv_A 271 NQKMVARALEWLD----VQPEDRVLDLFCGMGNFTLPLATQA-ASVVGVEGVPALVE-----KGQQNARLNG-------- 332 (433)
T ss_dssp HHHHHHHHHHHHT----CCTTCEEEEESCTTTTTHHHHHTTS-SEEEEEESCHHHHH-----HHHHHHHHTT--------
T ss_pred HHHHHHHHHHhhc----CCCCCEEEECCCCCCHHHHHHHhhC-CEEEEEeCCHHHHH-----HHHHHHHHcC--------
Confidence 4456666655431 2357799999999999999998874 49999999999984 4555654431
Q ss_pred CCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchh
Q 024311 96 SSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRA 175 (269)
Q Consensus 96 ~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~ 175 (269)
+ .+++|+.+|+.+... .+
T Consensus 333 ---------~-~~v~f~~~d~~~~l~-----------------------------------------------~~----- 350 (433)
T 1uwv_A 333 ---------L-QNVTFYHENLEEDVT-----------------------------------------------KQ----- 350 (433)
T ss_dssp ---------C-CSEEEEECCTTSCCS-----------------------------------------------SS-----
T ss_pred ---------C-CceEEEECCHHHHhh-----------------------------------------------hh-----
Confidence 1 267888888765210 00
Q ss_pred hhhhcccccCCCCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCc
Q 024311 176 WERASEADQGEGGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGI 249 (269)
Q Consensus 176 W~~~~~~~~~~~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~ 249 (269)
.....+||+|+. |..|... ..+++.|.. ++ |++++|+++.... ...-...+.+.|+
T Consensus 351 -------~~~~~~fD~Vv~-dPPr~g~--~~~~~~l~~-~~-p~~ivyvsc~p~t------lard~~~l~~~Gy 406 (433)
T 1uwv_A 351 -------PWAKNGFDKVLL-DPARAGA--AGVMQQIIK-LE-PIRIVYVSCNPAT------LARDSEALLKAGY 406 (433)
T ss_dssp -------GGGTTCCSEEEE-CCCTTCC--HHHHHHHHH-HC-CSEEEEEESCHHH------HHHHHHHHHHTTC
T ss_pred -------hhhcCCCCEEEE-CCCCccH--HHHHHHHHh-cC-CCeEEEEECChHH------HHhhHHHHHHCCc
Confidence 012347999997 8887654 356666665 45 8899999876542 3333455566675
No 204
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.78 E-value=8e-08 Score=86.64 Aligned_cols=40 Identities=15% Similarity=0.073 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~ 74 (269)
++++|||||||+|..++.++.. +..+|++.|+++.+++.+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a 130 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAA 130 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence 4679999999999999888876 557999999999999553
No 205
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.75 E-value=3e-08 Score=84.63 Aligned_cols=40 Identities=15% Similarity=0.196 Sum_probs=33.4
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCC------CeEEEEeCCHHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGA------GTVHFQDLSAETIRC 73 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga------~~Vv~tD~~~~vl~~ 73 (269)
..+.+|||+|||+|..++.++.... .+|+++|+++++++.
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~ 124 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNF 124 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHH
Confidence 3678999999999999988776542 489999999999854
No 206
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.74 E-value=2.7e-07 Score=84.48 Aligned_cols=68 Identities=18% Similarity=0.147 Sum_probs=50.2
Q ss_pred CccEEEEeccccccCCHH--HHHHHHHHhcCCC---CeEEEEEEcccc---------------------c-ccCcchHHH
Q 024311 188 GYDVILLTEIPYSVTSLK--KLYLLIKKCLRPP---YGVVYLATKKNY---------------------V-GFNNAARHL 240 (269)
Q Consensus 188 ~fDlIlasD~iY~~~~~~--~L~~~l~~~L~~p---~g~~~va~k~~~---------------------f-g~~~~~~~F 240 (269)
.||+|+++.++++....+ .+++.+++.|+ | +|+++|...... + |...+..++
T Consensus 246 ~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~-p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~ 324 (352)
T 1fp2_A 246 NADAVLLKYILHNWTDKDCLRILKKCKEAVT-NDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEW 324 (352)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHHS-GGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHH
T ss_pred CccEEEeehhhccCCHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHH
Confidence 399999999999887766 89999999999 7 898887632110 0 112346788
Q ss_pred HHHhhhcCceeEEEEe
Q 024311 241 RSLVDEEGIFGAHLIK 256 (269)
Q Consensus 241 ~~~~~~~g~~~~~~~~ 256 (269)
.+.+++.||-..++..
T Consensus 325 ~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 325 KKLFIEAGFQHYKISP 340 (352)
T ss_dssp HHHHHHTTCCEEEEEE
T ss_pred HHHHHHCCCCeeEEEe
Confidence 9999999986555543
No 207
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.74 E-value=1.2e-07 Score=79.04 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=37.3
Q ss_pred cHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc-C--CCeEEEEeCCH
Q 024311 15 SSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK-G--AGTVHFQDLSA 68 (269)
Q Consensus 15 as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~-g--a~~Vv~tD~~~ 68 (269)
++..|.+.+.+. ...-.+.+|||||||+|..++.++.. + ..+|++.|+++
T Consensus 6 ~~~kl~~~~~~~----~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 6 AAYKLIELDNKY----LFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp THHHHHHHHHHH----CCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHHHHHHHc----CCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 566677755543 12336789999999999999887764 3 35899999987
No 208
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.74 E-value=7.6e-08 Score=83.22 Aligned_cols=135 Identities=13% Similarity=0.143 Sum_probs=83.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFY 112 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 112 (269)
++++|||+|||+|..++.++.. + ..+|+++|.+++.++. .+.|+..+. ...++++.
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~-----a~~~~~~~g-----------------~~~~i~~~ 129 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAI-----AKKYWQKAG-----------------VAEKISLR 129 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHH-----HHHHHHHHT-----------------CGGGEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHH-----HHHHHHHcC-----------------CCCcEEEE
Confidence 5679999999999999888764 2 2489999999998844 344443220 11346665
Q ss_pred cCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEE
Q 024311 113 AGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVI 192 (269)
Q Consensus 113 ~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlI 192 (269)
.+|..+.. . .. ......++||+|
T Consensus 130 ~~d~~~~l--~------------------------------------------------------~l-~~~~~~~~fD~V 152 (232)
T 3cbg_A 130 LGPALATL--E------------------------------------------------------QL-TQGKPLPEFDLI 152 (232)
T ss_dssp ESCHHHHH--H------------------------------------------------------HH-HTSSSCCCEEEE
T ss_pred EcCHHHHH--H------------------------------------------------------HH-HhcCCCCCcCEE
Confidence 55533210 0 00 000011589999
Q ss_pred EEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEccccccc----------CcchHHHHHHhhhcCceeEE
Q 024311 193 LLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGF----------NNAARHLRSLVDEEGIFGAH 253 (269)
Q Consensus 193 lasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~----------~~~~~~F~~~~~~~g~~~~~ 253 (269)
+. |.. ...+..+++.+.++|+ |+|++++..-.+ .|. ...+.+|.+.+.+..-+...
T Consensus 153 ~~-d~~--~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 218 (232)
T 3cbg_A 153 FI-DAD--KRNYPRYYEIGLNLLR-RGGLMVIDNVLW-HGKVTEVDPQEAQTQVLQQFNRDLAQDERVRIS 218 (232)
T ss_dssp EE-CSC--GGGHHHHHHHHHHTEE-EEEEEEEECTTG-GGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEE
T ss_pred EE-CCC--HHHHHHHHHHHHHHcC-CCeEEEEeCCCc-CCccCCcccCChHHHHHHHHHHHHhhCCCeEEE
Confidence 96 332 4567888899999998 899988753221 110 01356788888765434333
No 209
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.74 E-value=8.2e-08 Score=85.82 Aligned_cols=40 Identities=20% Similarity=0.200 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~ 74 (269)
++++|||||||+|..++.++..+..+|++.|+++.+++.+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~a 114 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVS 114 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHH
Confidence 5689999999999999888877767999999999999654
No 210
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.74 E-value=4.8e-07 Score=78.63 Aligned_cols=39 Identities=5% Similarity=-0.054 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~ 73 (269)
++.+|||+|||+|..++.++.. ...+|+++|+++.+++.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~ 104 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNY 104 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHH
Confidence 5789999999999988776654 23489999999999944
No 211
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.74 E-value=1.3e-07 Score=84.39 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=35.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~ 74 (269)
++++|||||||+|..+..+++. +..+|++.|+++.+++.+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~a 115 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYS 115 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHH
Confidence 5789999999999999888876 667999999999999654
No 212
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.73 E-value=7.4e-08 Score=87.98 Aligned_cols=39 Identities=18% Similarity=0.167 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~ 73 (269)
++++|||||||+|..++.+++. +..+|++.|+++++++.
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ 155 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEV 155 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHH
Confidence 4679999999999999888876 45699999999999854
No 213
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.73 E-value=1.5e-07 Score=89.35 Aligned_cols=46 Identities=26% Similarity=0.378 Sum_probs=37.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQA 86 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~ 86 (269)
.+.+|||||||+|..++.++..+. +|++.|+++++++ ..+.|+..|
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~-----~A~~n~~~n 335 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIE-----MARRNVEIN 335 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHH-----HHHHHHHHH
T ss_pred CCCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHH-----HHHHHHHHc
Confidence 577999999999999999888755 8999999999984 445555443
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.72 E-value=1.5e-07 Score=85.52 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=34.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~ 74 (269)
++++|||||||+|..+..++.. +..+|++.|+++.+++.+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a 117 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVA 117 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence 5679999999999999888876 456999999999999654
No 215
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.72 E-value=4.6e-07 Score=83.74 Aligned_cols=135 Identities=19% Similarity=0.104 Sum_probs=90.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||+|||+|.....++.. +..++++.|+ +++++... ..++++|..
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----------------------------~~~~v~~~~ 250 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP-----------------------------QFPGVTHVG 250 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----------------------------CCTTEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh-----------------------------hcCCeEEEe
Confidence 5689999999999999777654 3458999999 87762210 013566666
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|..+ + ... . |+|+
T Consensus 251 ~D~~~-~---------------------------------------------------------------~p~-~-D~v~ 264 (364)
T 3p9c_A 251 GDMFK-E---------------------------------------------------------------VPS-G-DTIL 264 (364)
T ss_dssp CCTTT-C---------------------------------------------------------------CCC-C-SEEE
T ss_pred CCcCC-C---------------------------------------------------------------CCC-C-CEEE
Confidence 65432 1 011 2 9999
Q ss_pred EeccccccC--CHHHHHHHHHHhcCCCCeEEEEEEccc------------------------ccccCcchHHHHHHhhhc
Q 024311 194 LTEIPYSVT--SLKKLYLLIKKCLRPPYGVVYLATKKN------------------------YVGFNNAARHLRSLVDEE 247 (269)
Q Consensus 194 asD~iY~~~--~~~~L~~~l~~~L~~p~g~~~va~k~~------------------------~fg~~~~~~~F~~~~~~~ 247 (269)
.+.++++.. ....+++.+++.|+ |+|+++|..... .-|...+..+|.+.+++.
T Consensus 265 ~~~vlh~~~d~~~~~~L~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~A 343 (364)
T 3p9c_A 265 MKWILHDWSDQHCATLLKNCYDALP-AHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGA 343 (364)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSC-TTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHT
T ss_pred ehHHhccCCHHHHHHHHHHHHHHcC-CCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHC
Confidence 999999664 45578999999998 899988863211 011223467899999999
Q ss_pred CceeEEEEeeecCcceEEE
Q 024311 248 GIFGAHLIKEMTDRDIWKF 266 (269)
Q Consensus 248 g~~~~~~~~~~~~~~i~~~ 266 (269)
||-.+++..-.....|-.+
T Consensus 344 GF~~v~~~~~~~~~~vie~ 362 (364)
T 3p9c_A 344 GFTGVKSTYIYANAWAIEF 362 (364)
T ss_dssp TCCEEEEEEEETTEEEEEE
T ss_pred CCceEEEEEcCCceEEEEE
Confidence 9876776554444444443
No 216
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.71 E-value=3.9e-08 Score=91.93 Aligned_cols=47 Identities=30% Similarity=0.357 Sum_probs=37.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLAN 82 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N 82 (269)
.+.+|||+|||+|..|+.++.. ++.+|++.|.+++.++.+ ..|+++|
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a-~~N~~~n 94 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELM-KRNVMLN 94 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHH-HHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHH-HHHHHHh
Confidence 5789999999999999998876 666899999999998442 3444433
No 217
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.71 E-value=3.7e-08 Score=84.06 Aligned_cols=41 Identities=22% Similarity=0.277 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc-CC-CeEEEEeCCHHHHHHh
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK-GA-GTVHFQDLSAETIRCT 74 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~-ga-~~Vv~tD~~~~vl~~~ 74 (269)
..+.+|||+|||+|..++.++.. +. .+|+++|+++.+++.+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a 118 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDS 118 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHH
Confidence 36789999999999999877764 43 4899999999998543
No 218
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.70 E-value=1.5e-07 Score=83.89 Aligned_cols=113 Identities=13% Similarity=0.158 Sum_probs=76.9
Q ss_pred CCEEEEEcCCC---CHHHHHHHHc-CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeee
Q 024311 36 GKRVLELSCGY---GLPGIFACLK-GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHF 111 (269)
Q Consensus 36 ~~~VLELGcGt---Gl~gl~aa~~-ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 111 (269)
..+|||||||+ |.....++.. ...+|++.|+++.+|+.+ +.++.. ..++++
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~A-----r~~~~~--------------------~~~v~~ 132 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHG-----RALLAK--------------------DPNTAV 132 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHH-----HHHHTT--------------------CTTEEE
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHH-----HHhcCC--------------------CCCeEE
Confidence 47999999999 9777555543 234899999999998542 332210 135778
Q ss_pred ecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhc-ccccCCCCcc
Q 024311 112 YAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERAS-EADQGEGGYD 190 (269)
Q Consensus 112 ~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~-~~~~~~~~fD 190 (269)
+.+|..+.+..... .. .......+||
T Consensus 133 ~~~D~~~~~~~~~~-----------------------------------------------------~~~~~~~d~~~~d 159 (274)
T 2qe6_A 133 FTADVRDPEYILNH-----------------------------------------------------PDVRRMIDFSRPA 159 (274)
T ss_dssp EECCTTCHHHHHHS-----------------------------------------------------HHHHHHCCTTSCC
T ss_pred EEeeCCCchhhhcc-----------------------------------------------------chhhccCCCCCCE
Confidence 77776653221100 00 0001224899
Q ss_pred EEEEeccccccCC--HHHHHHHHHHhcCCCCeEEEEEEc
Q 024311 191 VILLTEIPYSVTS--LKKLYLLIKKCLRPPYGVVYLATK 227 (269)
Q Consensus 191 lIlasD~iY~~~~--~~~L~~~l~~~L~~p~g~~~va~k 227 (269)
+|++..++++... ...+++.+.+.|+ |+|.+++...
T Consensus 160 ~v~~~~vlh~~~d~~~~~~l~~~~~~L~-pGG~l~i~~~ 197 (274)
T 2qe6_A 160 AIMLVGMLHYLSPDVVDRVVGAYRDALA-PGSYLFMTSL 197 (274)
T ss_dssp EEEETTTGGGSCTTTHHHHHHHHHHHSC-TTCEEEEEEE
T ss_pred EEEEechhhhCCcHHHHHHHHHHHHhCC-CCcEEEEEEe
Confidence 9999999998765 8899999999998 8999888753
No 219
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.70 E-value=7.6e-08 Score=83.83 Aligned_cols=122 Identities=11% Similarity=0.015 Sum_probs=77.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-----CCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCee
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-----GAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSV 109 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-----ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v 109 (269)
++.+|||||||+|..++.++.. ...+|++.|+++++++.+. + ...++
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~----------------------~~~~v 132 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------S----------------------DMENI 132 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------G----------------------GCTTE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------c----------------------cCCce
Confidence 4679999999999999887765 2358999999998874321 0 11357
Q ss_pred eeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCc
Q 024311 110 HFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGY 189 (269)
Q Consensus 110 ~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~f 189 (269)
+++.+|..+...+. .....+|
T Consensus 133 ~~~~gD~~~~~~l~-----------------------------------------------------------~~~~~~f 153 (236)
T 2bm8_A 133 TLHQGDCSDLTTFE-----------------------------------------------------------HLREMAH 153 (236)
T ss_dssp EEEECCSSCSGGGG-----------------------------------------------------------GGSSSCS
T ss_pred EEEECcchhHHHHH-----------------------------------------------------------hhccCCC
Confidence 77777766531000 0122379
Q ss_pred cEEEEeccccccCCHHHHHHHHHH-hcCCCCeEEEEEEcccccccCcchHHHHHHhhhcC
Q 024311 190 DVILLTEIPYSVTSLKKLYLLIKK-CLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEG 248 (269)
Q Consensus 190 DlIlasD~iY~~~~~~~L~~~l~~-~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g 248 (269)
|+|+... .+ ..++.++..+.+ +|+ |+|++++..-.. ++.+.....+.+.+++.+
T Consensus 154 D~I~~d~-~~--~~~~~~l~~~~r~~Lk-pGG~lv~~d~~~-~~~~~~~~~~~~~l~~~~ 208 (236)
T 2bm8_A 154 PLIFIDN-AH--ANTFNIMKWAVDHLLE-EGDYFIIEDMIP-YWYRYAPQLFSEYLGAFR 208 (236)
T ss_dssp SEEEEES-SC--SSHHHHHHHHHHHTCC-TTCEEEECSCHH-HHHHHCHHHHHHHHHTTT
T ss_pred CEEEECC-ch--HhHHHHHHHHHHhhCC-CCCEEEEEeCcc-cccccCHHHHHHHHHhCc
Confidence 9998633 33 367788888886 998 899988853211 111112236666666654
No 220
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.69 E-value=3.7e-08 Score=92.65 Aligned_cols=47 Identities=19% Similarity=0.187 Sum_probs=38.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc--CCCeEEEEeCCHHHHHHhhHHHHHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLK--GAGTVHFQDLSAETIRCTTVPNVLANLEQA 86 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~--ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~ 86 (269)
.|.+|||++||+|..|+.++.. |+++|++.|.++..+ ..++.|+..|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av-----~~~~~N~~~N 100 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAI-----EIMKENFKLN 100 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHH-----HHHHHHHHHT
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHH-----HHHHHHHHHh
Confidence 4779999999999999998874 667999999999998 4456666554
No 221
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.68 E-value=1.8e-07 Score=88.53 Aligned_cols=41 Identities=7% Similarity=-0.001 Sum_probs=34.8
Q ss_pred CCCCEEEEEcCCCCHHHHHHHH-cCCCeEEEEeCCHHHHHHh
Q 024311 34 FRGKRVLELSCGYGLPGIFACL-KGAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~-~ga~~Vv~tD~~~~vl~~~ 74 (269)
-.+.+|||||||+|.+.+.+|. .++.+|++.|+++.+++.+
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelA 213 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYA 213 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 3678999999999999987774 5776799999999998654
No 222
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.67 E-value=4.1e-08 Score=88.01 Aligned_cols=40 Identities=18% Similarity=0.347 Sum_probs=31.5
Q ss_pred CCCccEEEEeccccc--cCCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 186 EGGYDVILLTEIPYS--VTSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 186 ~~~fDlIlasD~iY~--~~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
.++||+|++..++.. ++....+++.+.+.|+ |+|.+++..
T Consensus 211 ~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~-pgG~L~lg~ 252 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLK-PDGLLFAGH 252 (274)
T ss_dssp CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEE-EEEEEEECT
T ss_pred CCCeeEEEECCchHhCCHHHHHHHHHHHHHHhC-CCcEEEEEe
Confidence 358999999988643 3344788999999999 999998864
No 223
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.67 E-value=1.9e-07 Score=83.64 Aligned_cols=40 Identities=18% Similarity=0.163 Sum_probs=34.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~ 74 (269)
++++|||||||+|.....+++.. ..+|++.|+++.+++.+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a 118 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVS 118 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHH
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHH
Confidence 56899999999999998887763 46999999999998543
No 224
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.66 E-value=4.7e-07 Score=83.60 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=49.8
Q ss_pred ccEEEEeccccccCCHH--HHHHHHHHhcCCCCeEEEEEEccc--------------cc---------ccCcchHHHHHH
Q 024311 189 YDVILLTEIPYSVTSLK--KLYLLIKKCLRPPYGVVYLATKKN--------------YV---------GFNNAARHLRSL 243 (269)
Q Consensus 189 fDlIlasD~iY~~~~~~--~L~~~l~~~L~~p~g~~~va~k~~--------------~f---------g~~~~~~~F~~~ 243 (269)
||+|+++.++++..... .+++.+++.|+ |+|+++|..... .+ |...+..++.+.
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~l 346 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALS-PNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKL 346 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHH
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcC-CCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHH
Confidence 99999999999887766 89999999999 899988862110 00 112256788899
Q ss_pred hhhcCceeEEEEe
Q 024311 244 VDEEGIFGAHLIK 256 (269)
Q Consensus 244 ~~~~g~~~~~~~~ 256 (269)
+++.||-..++..
T Consensus 347 l~~aGf~~~~~~~ 359 (372)
T 1fp1_D 347 SKLSGFSKFQVAC 359 (372)
T ss_dssp HHHTTCSEEEEEE
T ss_pred HHHCCCceEEEEE
Confidence 9999986555543
No 225
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.65 E-value=6.6e-07 Score=82.35 Aligned_cols=131 Identities=14% Similarity=0.096 Sum_probs=89.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
..++|+|+|||+|...+.++...+ .++++.|. |++++ ..+.+... ...++|++..
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~-----~a~~~~~~------------------~~~~rv~~~~ 234 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVW-----TAKQHFSF------------------QEEEQIDFQE 234 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHH-----HHHHHSCC--------------------CCSEEEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHH-----HHHHhhhh------------------cccCceeeec
Confidence 457999999999999987776543 57899998 77773 33333211 0134677777
Q ss_pred CCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcccccCCcccccccccCchhhhhhcccccCCCCccEEE
Q 024311 114 GDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSIIGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVIL 193 (269)
Q Consensus 114 ~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIl 193 (269)
+|.... ....+|+|+
T Consensus 235 gD~~~~-----------------------------------------------------------------~~~~~D~~~ 249 (353)
T 4a6d_A 235 GDFFKD-----------------------------------------------------------------PLPEADLYI 249 (353)
T ss_dssp SCTTTS-----------------------------------------------------------------CCCCCSEEE
T ss_pred CccccC-----------------------------------------------------------------CCCCceEEE
Confidence 764321 123579999
Q ss_pred EeccccccCCH--HHHHHHHHHhcCCCCeEEEEEEcccc-----------c---------ccCcchHHHHHHhhhcCcee
Q 024311 194 LTEIPYSVTSL--KKLYLLIKKCLRPPYGVVYLATKKNY-----------V---------GFNNAARHLRSLVDEEGIFG 251 (269)
Q Consensus 194 asD~iY~~~~~--~~L~~~l~~~L~~p~g~~~va~k~~~-----------f---------g~~~~~~~F~~~~~~~g~~~ 251 (269)
.+.++++.++- ..+++.+++.|+ |+|+++|.-.... + |...+..+|.+.+++.||-.
T Consensus 250 ~~~vlh~~~d~~~~~iL~~~~~al~-pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~ 328 (353)
T 4a6d_A 250 LARVLHDWADGKCSHLLERIYHTCK-PGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRD 328 (353)
T ss_dssp EESSGGGSCHHHHHHHHHHHHHHCC-TTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEE
T ss_pred eeeecccCCHHHHHHHHHHHHhhCC-CCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCce
Confidence 99999987654 467889999998 8999888642110 0 12235688999999999866
Q ss_pred EEEE
Q 024311 252 AHLI 255 (269)
Q Consensus 252 ~~~~ 255 (269)
+++.
T Consensus 329 v~v~ 332 (353)
T 4a6d_A 329 FQFK 332 (353)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6653
No 226
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.64 E-value=7.2e-07 Score=81.82 Aligned_cols=67 Identities=15% Similarity=0.146 Sum_probs=49.7
Q ss_pred CccEEEEeccccccCCHH--HHHHHHHHhcCCC---CeEEEEEEcccc--------------c---------ccCcchHH
Q 024311 188 GYDVILLTEIPYSVTSLK--KLYLLIKKCLRPP---YGVVYLATKKNY--------------V---------GFNNAARH 239 (269)
Q Consensus 188 ~fDlIlasD~iY~~~~~~--~L~~~l~~~L~~p---~g~~~va~k~~~--------------f---------g~~~~~~~ 239 (269)
.||+|+++.++++..... .+++.+++.|+ | +|+++|...... + |...+..+
T Consensus 251 ~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~-p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e 329 (358)
T 1zg3_A 251 SADAVLLKWVLHDWNDEQSLKILKNSKEAIS-HKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQE 329 (358)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHTG-GGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHH
T ss_pred CceEEEEcccccCCCHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHH
Confidence 499999999999887755 89999999999 7 898888632110 0 11225678
Q ss_pred HHHHhhhcCceeEEEE
Q 024311 240 LRSLVDEEGIFGAHLI 255 (269)
Q Consensus 240 F~~~~~~~g~~~~~~~ 255 (269)
+.+.+++.||-..++.
T Consensus 330 ~~~ll~~aGf~~~~~~ 345 (358)
T 1zg3_A 330 WEKLIYDAGFSSYKIT 345 (358)
T ss_dssp HHHHHHHTTCCEEEEE
T ss_pred HHHHHHHcCCCeeEEE
Confidence 8899999998655553
No 227
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.62 E-value=1.3e-07 Score=86.92 Aligned_cols=40 Identities=13% Similarity=0.113 Sum_probs=34.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~ 74 (269)
++++|||||||+|..++.+++.. ..+|++.|+++.+++.+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~A 160 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVS 160 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHH
Confidence 56799999999999998888763 46999999999999654
No 228
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.62 E-value=8.7e-08 Score=82.07 Aligned_cols=41 Identities=22% Similarity=0.203 Sum_probs=33.3
Q ss_pred CCCCEEEEEcCCCCHHHHHHHH-cCC------CeEEEEeCCHHHHHHh
Q 024311 34 FRGKRVLELSCGYGLPGIFACL-KGA------GTVHFQDLSAETIRCT 74 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~-~ga------~~Vv~tD~~~~vl~~~ 74 (269)
..+.+|||+|||+|..+..++. .+. .+|+++|+++++++.+
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a 130 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRS 130 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHH
Confidence 3678999999999999877765 342 4899999999998554
No 229
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.61 E-value=2.2e-07 Score=86.16 Aligned_cols=73 Identities=16% Similarity=0.178 Sum_probs=52.9
Q ss_pred HHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCC
Q 024311 17 IDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPES 96 (269)
Q Consensus 17 ~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~ 96 (269)
..|.+++.+.. ...+.+|||||||+|..++.+|.. +.+|++.|.+++++ ...+.|+..|.
T Consensus 200 ~~l~~~~~~~~-----~~~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai-----~~a~~n~~~ng--------- 259 (369)
T 3bt7_A 200 IQMLEWALDVT-----KGSKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSV-----AAAQYNIAANH--------- 259 (369)
T ss_dssp HHHHHHHHHHT-----TTCCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHH-----HHHHHHHHHTT---------
T ss_pred HHHHHHHHHHh-----hcCCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHH-----HHHHHHHHHcC---------
Confidence 56666666553 224679999999999999988874 55999999999998 44556665431
Q ss_pred CCCCCccCCCCeeeeecCCCCC
Q 024311 97 SLTPSRQTLAPSVHFYAGDWEE 118 (269)
Q Consensus 97 ~~~~~~~~~~~~v~~~~~dw~~ 118 (269)
+ .+++|+.+|..+
T Consensus 260 --------~-~~v~~~~~d~~~ 272 (369)
T 3bt7_A 260 --------I-DNVQIIRMAAEE 272 (369)
T ss_dssp --------C-CSEEEECCCSHH
T ss_pred --------C-CceEEEECCHHH
Confidence 1 367787777654
No 230
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.60 E-value=5.6e-08 Score=84.16 Aligned_cols=37 Identities=11% Similarity=-0.054 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCC-HHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLS-AETI 71 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~-~~vl 71 (269)
.+.+|||||||+|...+.++.. ...+|++.|++ +.++
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml 62 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLF 62 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGH
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHH
Confidence 5679999999999999887743 33489999999 6665
No 231
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.59 E-value=6.1e-08 Score=91.40 Aligned_cols=37 Identities=14% Similarity=0.312 Sum_probs=29.6
Q ss_pred CCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEE
Q 024311 187 GGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLA 225 (269)
Q Consensus 187 ~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va 225 (269)
++||+|++ |...........++.+.++|+ |+|++++.
T Consensus 287 ~sFDlVis-dgsH~~~d~~~aL~el~rvLK-PGGvlVi~ 323 (419)
T 3sso_A 287 GPFDIVID-DGSHINAHVRTSFAALFPHVR-PGGLYVIE 323 (419)
T ss_dssp CCEEEEEE-CSCCCHHHHHHHHHHHGGGEE-EEEEEEEE
T ss_pred CCccEEEE-CCcccchhHHHHHHHHHHhcC-CCeEEEEE
Confidence 58999997 555555567778888889999 89999887
No 232
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.57 E-value=3.4e-07 Score=87.78 Aligned_cols=46 Identities=24% Similarity=0.441 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc--CCCeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK--GAGTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~--ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
.|.+|||+|||+|..++.+|.. +..+|++.|+++..+ ..++.|+..
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l-----~~a~~n~~r 148 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRV-----RGLLENVER 148 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHH-----HHHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-----HHHHHHHHH
Confidence 5789999999999999777653 235899999999998 445566544
No 233
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.56 E-value=1.4e-06 Score=82.95 Aligned_cols=45 Identities=13% Similarity=0.167 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CC-CeEEEEeCCHHHHHHhhHHHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GA-GTVHFQDLSAETIRCTTVPNVLANLE 84 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~ 84 (269)
.|.+|||+|||+|..++.++.. +. .+|++.|.++..++ .++.|+.
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~-----~~~~~~~ 305 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMK-----RLKDFVK 305 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHH-----HHHHHHH
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHH-----HHHHHHH
Confidence 5779999999999988776653 32 58999999999884 4455554
No 234
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.56 E-value=8.7e-07 Score=83.70 Aligned_cols=46 Identities=20% Similarity=0.284 Sum_probs=36.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
.|.+|||+|||+|..++.++..+. .+|++.|.++..+ ..++.|+..
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l-----~~~~~~~~~ 292 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRL-----SRVYDNLKR 292 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTH-----HHHHHHHHH
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHH-----HHHHHHHHH
Confidence 577999999999999987776543 5899999999888 445555543
No 235
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.55 E-value=4.7e-07 Score=86.67 Aligned_cols=46 Identities=20% Similarity=0.323 Sum_probs=35.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc--CCCeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK--GAGTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~--ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
.|.+|||+|||+|..++.+|.. +..+|++.|+++..++ -++.|+..
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~-----~~~~n~~r 152 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAK-----ILSENIER 152 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHH-----HHHHHHHH
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHH-----HHHHHHHH
Confidence 5789999999999888776653 3358999999999884 45555544
No 236
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.55 E-value=1.6e-07 Score=85.14 Aligned_cols=40 Identities=15% Similarity=0.114 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~ 74 (269)
++++|||||||+|..++.++..+ ..+|++.|+++++++.+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a 135 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVS 135 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHH
Confidence 56899999999999999888764 46999999999999654
No 237
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.54 E-value=1.2e-06 Score=81.62 Aligned_cols=51 Identities=20% Similarity=0.134 Sum_probs=39.2
Q ss_pred HHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc--CCCeEEEEeCCHHHH
Q 024311 17 IDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK--GAGTVHFQDLSAETI 71 (269)
Q Consensus 17 ~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~--ga~~Vv~tD~~~~vl 71 (269)
..+++++.+... ..++.+|||+|||+|...+.++.. ...+|++.|+++.++
T Consensus 25 ~~l~~~~~~~~~----~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~ 77 (421)
T 2ih2_A 25 PEVVDFMVSLAE----APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKAL 77 (421)
T ss_dssp HHHHHHHHHHCC----CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTC
T ss_pred HHHHHHHHHhhc----cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHH
Confidence 457777777642 134669999999999999888764 345899999999876
No 238
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.52 E-value=1.7e-06 Score=83.21 Aligned_cols=46 Identities=17% Similarity=0.326 Sum_probs=35.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
.|.+|||+|||+|..++.+|.. + ..+|++.|+++..++ .++.|+..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~-----~~~~n~~r 164 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVK-----VLHANISR 164 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHH-----HHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHH-----HHHHHHHH
Confidence 5789999999999998776654 2 358999999999984 44555543
No 239
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.49 E-value=4.4e-07 Score=81.29 Aligned_cols=50 Identities=18% Similarity=0.106 Sum_probs=38.8
Q ss_pred HHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 19 LVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 19 La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
+++.+.+.. ....+.+|||+|||+|..+..++..+. +|++.|+++.+++.
T Consensus 16 i~~~i~~~~----~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~ 65 (285)
T 1zq9_A 16 IINSIIDKA----ALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAE 65 (285)
T ss_dssp HHHHHHHHT----CCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHH
T ss_pred HHHHHHHhc----CCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHH
Confidence 445555443 123678999999999999988888776 89999999999843
No 240
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.48 E-value=1.9e-07 Score=85.07 Aligned_cols=40 Identities=20% Similarity=0.103 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~ 74 (269)
++++|||||||+|..++.++.. +..+|++.|+++.+++.+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~A 148 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVA 148 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHH
Confidence 4679999999999999888876 346999999999998543
No 241
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.47 E-value=1e-06 Score=77.84 Aligned_cols=37 Identities=22% Similarity=0.386 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
...+|||||||+|.+++... ++.+|+++|+++.+++.
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ 141 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDV 141 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHH
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHH
Confidence 56799999999999999877 66699999999999944
No 242
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.47 E-value=3.2e-07 Score=75.19 Aligned_cols=64 Identities=25% Similarity=0.339 Sum_probs=49.9
Q ss_pred CCCCccEEEEecccccc-CCHHHHHHHHHHhcCCCCeEEEEEEccccc----ccCcchHHHHHHhhhcCc
Q 024311 185 GEGGYDVILLTEIPYSV-TSLKKLYLLIKKCLRPPYGVVYLATKKNYV----GFNNAARHLRSLVDEEGI 249 (269)
Q Consensus 185 ~~~~fDlIlasD~iY~~-~~~~~L~~~l~~~L~~p~g~~~va~k~~~f----g~~~~~~~F~~~~~~~g~ 249 (269)
..++||+|+++.++++. ...+.+++.++++|+ |+|++++....... .......++.+.+++.||
T Consensus 60 ~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 60 KESSFDIILSGLVPGSTTLHSAEILAEIARILR-PGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEE-EEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred CCCCEeEEEECChhhhcccCHHHHHHHHHHHCC-CCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 34689999999999987 788999999999999 89999986432110 001246789999999998
No 243
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.47 E-value=8.9e-07 Score=79.95 Aligned_cols=62 Identities=16% Similarity=0.154 Sum_probs=42.9
Q ss_pred CCccEEEEeccccc------------cCCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEE
Q 024311 187 GGYDVILLTEIPYS------------VTSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 187 ~~fDlIlasD~iY~------------~~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
.+||+|++ |+..+ ...++.+++.+.++|+ |+|.+++..-.. +..+++...+++.||..+++
T Consensus 122 ~~fD~Vvs-n~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lk-pGG~~v~~~~~~-----~~~~~l~~~l~~~GF~~v~~ 194 (290)
T 2xyq_A 122 NKWDLIIS-DMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLA-LGGSIAVKITEH-----SWNADLYKLMGHFSWWTAFV 194 (290)
T ss_dssp SCEEEEEE-CCCCCC---CCSCCCCCCTHHHHHHHHHHHHEE-EEEEEEEEECSS-----SCCHHHHHHHTTEEEEEEEE
T ss_pred CcccEEEE-cCCccccccccccccchHHHHHHHHHHHHHhcC-CCcEEEEEEecc-----CCHHHHHHHHHHcCCcEEEE
Confidence 47999997 33211 1235678889999999 899988864332 23568999999988755555
Q ss_pred E
Q 024311 255 I 255 (269)
Q Consensus 255 ~ 255 (269)
+
T Consensus 195 ~ 195 (290)
T 2xyq_A 195 T 195 (290)
T ss_dssp E
T ss_pred E
Confidence 4
No 244
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.46 E-value=1.1e-06 Score=80.34 Aligned_cols=40 Identities=13% Similarity=0.021 Sum_probs=32.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCC------CeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGA------GTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga------~~Vv~tD~~~~vl~~~ 74 (269)
.+.+|||+|||+|...+.++.... .+|+++|+++.+++.+
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a 175 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLA 175 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHH
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHH
Confidence 567999999999998887775432 4899999999998554
No 245
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.43 E-value=3.7e-07 Score=83.48 Aligned_cols=38 Identities=18% Similarity=0.103 Sum_probs=31.7
Q ss_pred CEEEEEcCCCCHHHHHHHH-cCCCeEEEEeCCHHHHHHh
Q 024311 37 KRVLELSCGYGLPGIFACL-KGAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 37 ~~VLELGcGtGl~gl~aa~-~ga~~Vv~tD~~~~vl~~~ 74 (269)
.+|||||||+|.....+++ ....+|++.|+++.+++.+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~A 129 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLS 129 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHH
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHH
Confidence 4999999999999988776 4344899999999998543
No 246
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.43 E-value=1e-06 Score=78.66 Aligned_cols=38 Identities=13% Similarity=0.090 Sum_probs=32.9
Q ss_pred CCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHH
Q 024311 36 GKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRC 73 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~ 73 (269)
..+|||||||+|.+++.++.. +..+|++.|+|+.+++.
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~ 171 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGF 171 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHH
Confidence 569999999999999887765 56699999999999944
No 247
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.43 E-value=1.1e-06 Score=82.06 Aligned_cols=53 Identities=23% Similarity=0.168 Sum_probs=39.8
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCC---------------------------------------
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGA--------------------------------------- 58 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga--------------------------------------- 58 (269)
.||..|.... ....+.+|||++||+|...+.||..++
T Consensus 182 ~lAa~ll~~~----~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 182 TLAAGLIYLT----PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp HHHHHHHHTS----CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred HHHHHHHHhh----CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 4666665542 123678999999999999998887543
Q ss_pred CeEEEEeCCHHHHHHh
Q 024311 59 GTVHFQDLSAETIRCT 74 (269)
Q Consensus 59 ~~Vv~tD~~~~vl~~~ 74 (269)
.+|++.|+++.+++.+
T Consensus 258 ~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIA 273 (385)
T ss_dssp CCEEEEESCHHHHHHH
T ss_pred ceEEEEECCHHHHHHH
Confidence 3699999999999543
No 248
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.42 E-value=1.2e-06 Score=79.08 Aligned_cols=39 Identities=23% Similarity=0.218 Sum_probs=34.1
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
..+.+|||+|||+|..++.++..+. +|++.|+++.+++.
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~ 79 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISE 79 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHH
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHH
Confidence 3678999999999999998888765 89999999999843
No 249
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.39 E-value=3.3e-06 Score=76.54 Aligned_cols=46 Identities=20% Similarity=0.169 Sum_probs=34.5
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeC
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDL 66 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~ 66 (269)
.++..|.+.+.+. ....+.+|||||||+|..+..++.. .+|++.|.
T Consensus 66 R~a~KL~~i~~~~-----~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~ 111 (305)
T 2p41_A 66 RGSAKLRWFVERN-----LVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKG 111 (305)
T ss_dssp THHHHHHHHHHTT-----SSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEE
T ss_pred cHHHHHHHHHHcC-----CCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEec
Confidence 3555666555441 2335789999999999999888877 37999998
No 250
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.37 E-value=2.5e-06 Score=79.99 Aligned_cols=59 Identities=20% Similarity=0.155 Sum_probs=41.8
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCC---------------------------------------
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGA--------------------------------------- 58 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga--------------------------------------- 58 (269)
.||..|.... ..-.+..|||.+||+|...+.||..++
T Consensus 188 ~lAa~ll~l~----~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 188 TMAAALVLLT----SWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp HHHHHHHHHS----CCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHHh----CCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 3555555442 123577999999999999988887543
Q ss_pred CeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 59 GTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 59 ~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
.+|++.|+++.+++. .+.|+..
T Consensus 264 ~~V~GvDid~~al~~-----Ar~Na~~ 285 (393)
T 3k0b_A 264 LNIIGGDIDARLIEI-----AKQNAVE 285 (393)
T ss_dssp CCEEEEESCHHHHHH-----HHHHHHH
T ss_pred ceEEEEECCHHHHHH-----HHHHHHH
Confidence 259999999999954 4555543
No 251
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.35 E-value=8.6e-07 Score=78.68 Aligned_cols=39 Identities=10% Similarity=-0.121 Sum_probs=33.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~ 74 (269)
.+++|||||||+|.....++..+ .+|++.|+++.+++.+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~a 110 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSF 110 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGG
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHH
Confidence 56799999999998888777666 7999999999998654
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.34 E-value=6e-06 Score=77.27 Aligned_cols=59 Identities=17% Similarity=0.189 Sum_probs=42.5
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCC---------------------------------------
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGA--------------------------------------- 58 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga--------------------------------------- 58 (269)
.||..|.... ..-.+..|||.+||+|...+.||..+.
T Consensus 181 ~LAaall~l~----~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 181 NMAAAIILLS----NWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp HHHHHHHHHT----TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred HHHHHHHHHh----CCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 4666555542 123577999999999999998887543
Q ss_pred CeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 59 GTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 59 ~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
.+|++.|+++.+++. .+.|+..
T Consensus 257 ~~v~GvDid~~al~~-----Ar~Na~~ 278 (384)
T 3ldg_A 257 LDISGFDFDGRMVEI-----ARKNARE 278 (384)
T ss_dssp CCEEEEESCHHHHHH-----HHHHHHH
T ss_pred ceEEEEECCHHHHHH-----HHHHHHH
Confidence 259999999999944 4555543
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.32 E-value=3.8e-06 Score=75.92 Aligned_cols=39 Identities=15% Similarity=0.119 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
..+.+|||+|||+|..+..++..+. +|++.|+++.++..
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~~~-~V~aVEid~~li~~ 87 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKNAK-KVYVIEIDKSLEPY 87 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCGGGHHH
T ss_pred CCcCEEEEECCCchHHHHHHHhcCC-EEEEEECCHHHHHH
Confidence 3678999999999999988887754 99999999998843
No 254
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.30 E-value=1.5e-06 Score=77.24 Aligned_cols=48 Identities=19% Similarity=0.163 Sum_probs=36.6
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCH
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSA 68 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~ 68 (269)
.++.-|.+.+... ....+.+|||||||+|..+..++.. .+|++.|+++
T Consensus 58 R~a~KL~~i~~~~-----~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~ 105 (265)
T 2oxt_A 58 RGTAKLAWMEERG-----YVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT 105 (265)
T ss_dssp THHHHHHHHHHHT-----SCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC
T ss_pred hHHHHHHHHHHcC-----CCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch
Confidence 4555565555442 3346889999999999999888877 4899999987
No 255
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.25 E-value=1.8e-06 Score=77.25 Aligned_cols=48 Identities=17% Similarity=0.135 Sum_probs=35.6
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCH
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSA 68 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~ 68 (269)
.++..|.+.+.. .....+.+|||||||+|..+..++.. .+|++.|+++
T Consensus 66 R~a~KL~~i~~~-----~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~ 113 (276)
T 2wa2_A 66 RGTAKLAWIDER-----GGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT 113 (276)
T ss_dssp HHHHHHHHHHHT-----TSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC
T ss_pred hHHHHHHHHHHc-----CCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch
Confidence 344445444433 12346889999999999999888877 4899999987
No 256
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.25 E-value=7.7e-06 Score=71.43 Aligned_cols=50 Identities=10% Similarity=0.106 Sum_probs=38.9
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
.+++.+.+.. ....+.+|||+|||+|..+..++..+. +|++.|+++.+++
T Consensus 17 ~~~~~i~~~~----~~~~~~~VLDiG~G~G~lt~~l~~~~~-~v~~vD~~~~~~~ 66 (244)
T 1qam_A 17 HNIDKIMTNI----RLNEHDNIFEIGSGKGHFTLELVQRCN-FVTAIEIDHKLCK 66 (244)
T ss_dssp HHHHHHHTTC----CCCTTCEEEEECCTTSHHHHHHHHHSS-EEEEECSCHHHHH
T ss_pred HHHHHHHHhC----CCCCCCEEEEEeCCchHHHHHHHHcCC-eEEEEECCHHHHH
Confidence 4455555442 123678999999999999998888874 8999999999884
No 257
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.24 E-value=9e-07 Score=78.41 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSA 68 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~ 68 (269)
.+.+|||+|||+|..++.+|..|. +|++.|.++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~ 115 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHP 115 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCC-EEEEEECCh
Confidence 467999999999999999998876 899999999
No 258
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.24 E-value=2.4e-06 Score=84.80 Aligned_cols=49 Identities=10% Similarity=-0.004 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHHHcCC---C--eEEEEeCCHHHHHHhhHHHHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGIFACLKGA---G--TVHFQDLSAETIRCTTVPNVLAN 82 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl~aa~~ga---~--~Vv~tD~~~~vl~~~~~~Nl~~N 82 (269)
...+++.||++|||+|+++..++++++ . +|++.+-|+-.. .++.++..|
T Consensus 354 ~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~--~a~~~v~~N 407 (637)
T 4gqb_A 354 KDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV--VTLENWQFE 407 (637)
T ss_dssp TTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH--HHHHHHHHH
T ss_pred ccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH--HHHHHHHhc
Confidence 355778999999999999766555443 3 689999998543 334455444
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.18 E-value=2.3e-06 Score=79.59 Aligned_cols=40 Identities=23% Similarity=0.095 Sum_probs=35.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~ 74 (269)
++++||+||||+|..+..+++.++.+|++.|+++.+++.+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~A 227 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGC 227 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHH
Confidence 6789999999999999888887778999999999999553
No 260
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.15 E-value=3.5e-06 Score=79.55 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=33.8
Q ss_pred CCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 36 GKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
|.+|||||||+|..++.++..++ +|++.|.++.+++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~ 130 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVA 130 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHH
Confidence 89999999999999999888876 99999999999844
No 261
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.14 E-value=1.6e-05 Score=75.42 Aligned_cols=53 Identities=19% Similarity=0.164 Sum_probs=38.2
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc--------------CCCeEEEEeCCHHHHHHh
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK--------------GAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~--------------ga~~Vv~tD~~~~vl~~~ 74 (269)
.++++|.+... ...+.+|||.|||+|...+.++.. ...++++.|+++.+++.+
T Consensus 158 ~v~~~mv~~l~----~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA 224 (445)
T 2okc_A 158 PLIQAMVDCIN----PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLA 224 (445)
T ss_dssp HHHHHHHHHHC----CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhC----CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHH
Confidence 45666665542 235779999999999888776642 224799999999998554
No 262
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.06 E-value=8.7e-05 Score=67.31 Aligned_cols=46 Identities=17% Similarity=0.242 Sum_probs=36.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc--CCCeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK--GAGTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~--ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
.|.+|||+|||+|..++.++.. +..+|++.|.++..+ ..++.|+..
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l-----~~~~~n~~r 149 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRL-----ASMATLLAR 149 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHH-----HHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHH-----HHHHHHHHH
Confidence 5789999999999888776653 346899999999988 445566543
No 263
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.02 E-value=2.5e-05 Score=68.60 Aligned_cols=51 Identities=16% Similarity=0.161 Sum_probs=39.7
Q ss_pred HHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 19 LVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 19 La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
+++.+.+.. ....+.+|||+|||+|..+..++..|+.+|++.|+++.+++.
T Consensus 19 i~~~iv~~~----~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~ 69 (249)
T 3ftd_A 19 VLKKIAEEL----NIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVEN 69 (249)
T ss_dssp HHHHHHHHT----TCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHH
T ss_pred HHHHHHHhc----CCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHH
Confidence 344555443 123678999999999999999988876799999999998843
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.01 E-value=3.7e-05 Score=68.59 Aligned_cols=36 Identities=22% Similarity=0.142 Sum_probs=32.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
.+ +|||+|||+|..+..++..++ +|++.|+++.+++
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~ 82 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRP 82 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHH
T ss_pred CC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHH
Confidence 56 999999999999999888875 8999999999884
No 265
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.96 E-value=0.00011 Score=65.95 Aligned_cols=37 Identities=8% Similarity=-0.053 Sum_probs=29.8
Q ss_pred EEEEeccccccCCH---HHHHHHHHHhcCCCCeEEEEEEcc
Q 024311 191 VILLTEIPYSVTSL---KKLYLLIKKCLRPPYGVVYLATKK 228 (269)
Q Consensus 191 lIlasD~iY~~~~~---~~L~~~l~~~L~~p~g~~~va~k~ 228 (269)
.|++.-++++.... ..+++.+.+.|+ |+|.+.++...
T Consensus 163 av~~~avLH~l~d~~~p~~~l~~l~~~L~-PGG~Lvls~~~ 202 (277)
T 3giw_A 163 ALTVIAIVHFVLDEDDAVGIVRRLLEPLP-SGSYLAMSIGT 202 (277)
T ss_dssp EEEEESCGGGSCGGGCHHHHHHHHHTTSC-TTCEEEEEEEC
T ss_pred hHHhhhhHhcCCchhhHHHHHHHHHHhCC-CCcEEEEEecc
Confidence 57778888887774 578999999998 99999988654
No 266
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.94 E-value=2.4e-05 Score=69.13 Aligned_cols=38 Identities=8% Similarity=0.201 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
.+.+|||+|||+|..+..++..+. +|++.|+++++++.
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~-~V~avEid~~~~~~ 66 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECD-NLALVEIDRDLVAF 66 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSS-EEEEEECCHHHHHH
T ss_pred CcCEEEEEcccccHHHHHHHHhCC-EEEEEECCHHHHHH
Confidence 578999999999999999888874 89999999999843
No 267
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.90 E-value=2.9e-06 Score=76.25 Aligned_cols=153 Identities=10% Similarity=0.007 Sum_probs=101.4
Q ss_pred CCCCccCc-eeecc----HHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHH
Q 024311 3 SSKPDGFL-KCWES----SIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVP 77 (269)
Q Consensus 3 ~g~ye~G~-~vW~a----s~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~ 77 (269)
+|-|+.|. ++|.+ .-.|..|+.-.. .+.+..+||+=+|+|..|+.+.+ ++.++++.|.++..+ .
T Consensus 59 tgE~~~GI~rl~~~~~~~p~~l~~yf~~l~-----~~n~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~-----~ 127 (283)
T 2oo3_A 59 TEEYKEGINPVWLDRENLPSLFLEYISVIK-----QINLNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEY-----N 127 (283)
T ss_dssp CCGGGGTHHHHHHTGGGSCGGGHHHHHHHH-----HHSSSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHH-----H
T ss_pred cHHHHHHHHHHHhcccCCcHHHHHHHHHHH-----HhcCCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHH-----H
Confidence 56677775 56762 223455655432 14567899999999999999888 557999999999887 5
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeecCCCCCcchhhhhhccccccccccccccccccccccCCCCCCCcc
Q 024311 78 NVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYAGDWEELPTVLSVVRNDVSEVTTGMSLSFSEEDFMDGCSSQDGSI 157 (269)
Q Consensus 78 Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dw~~~~~~~~~~~~d~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 157 (269)
.++.|+.. ..+++++..|-... +.
T Consensus 128 ~L~~Nl~~--------------------~~~~~V~~~D~~~~---L~--------------------------------- 151 (283)
T 2oo3_A 128 FLLKLPHF--------------------NKKVYVNHTDGVSK---LN--------------------------------- 151 (283)
T ss_dssp HHTTSCCT--------------------TSCEEEECSCHHHH---HH---------------------------------
T ss_pred HHHHHhCc--------------------CCcEEEEeCcHHHH---HH---------------------------------
Confidence 56666521 12344444431110 00
Q ss_pred cccCCcccccccccCchhhhhhcccccCCCCccEEEEeccccc-cCCHHHHHHHHHHh-cCCCCeEEEEEEcccccccCc
Q 024311 158 IGQDSSSRRSRKLSGSRAWERASEADQGEGGYDVILLTEIPYS-VTSLKKLYLLIKKC-LRPPYGVVYLATKKNYVGFNN 235 (269)
Q Consensus 158 ~~~~~~~~~~~~l~gs~~W~~~~~~~~~~~~fDlIlasD~iY~-~~~~~~L~~~l~~~-L~~p~g~~~va~k~~~fg~~~ 235 (269)
.......+||+|+. |..|. ...++.+++.|... .+.|+|++.|-++... ..
T Consensus 152 -----------------------~l~~~~~~fdLVfi-DPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~---~~ 204 (283)
T 2oo3_A 152 -----------------------ALLPPPEKRGLIFI-DPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVN---KA 204 (283)
T ss_dssp -----------------------HHCSCTTSCEEEEE-CCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESS---HH
T ss_pred -----------------------HhcCCCCCccEEEE-CCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccc---hH
Confidence 00012347999999 99999 46888888888773 3348898877765532 23
Q ss_pred chHHHHHHhhhcCc
Q 024311 236 AARHLRSLVDEEGI 249 (269)
Q Consensus 236 ~~~~F~~~~~~~g~ 249 (269)
..+.|.+.+++.|.
T Consensus 205 ~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 205 WTEQFLRKMREISS 218 (283)
T ss_dssp HHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhcCC
Confidence 57899999998875
No 268
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.88 E-value=5.5e-07 Score=78.48 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
.+.+|||+|||+|..++.++..+ .+|++.|+++.+++
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~ 65 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFN 65 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHH
Confidence 67799999999999998888887 48999999998773
No 269
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.84 E-value=1.9e-05 Score=64.45 Aligned_cols=59 Identities=19% Similarity=0.148 Sum_probs=45.3
Q ss_pred CCCCccCceeeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCH-HHHHHHH-cCCCeEEEEeCCHHHH
Q 024311 3 SSKPDGFLKCWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGL-PGIFACL-KGAGTVHFQDLSAETI 71 (269)
Q Consensus 3 ~g~ye~G~~vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl-~gl~aa~-~ga~~Vv~tD~~~~vl 71 (269)
||---.|++.|+ .|++||.+.. ..+.+|||+|||.|. .+..++. .|. .|++||+++..+
T Consensus 12 ~~~~~~~~~m~e---~LaeYI~~~~------~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av 72 (153)
T 2k4m_A 12 SGLVPRGSHMWN---DLAVYIIRCS------GPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHG 72 (153)
T ss_dssp CCCCCCCCHHHH---HHHHHHHHHS------CSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSST
T ss_pred CCcccchhhHHH---HHHHHHHhcC------CCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCcccc
Confidence 344455677754 5999998873 235699999999994 8888876 887 899999998644
No 270
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.83 E-value=2.3e-05 Score=78.35 Aligned_cols=37 Identities=14% Similarity=0.081 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc----C----------CCeEEEEeCCHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK----G----------AGTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~----g----------a~~Vv~tD~~~~vl 71 (269)
+++.||++|||+|.++..++.+ + +.+|++.|-|+...
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~ 459 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAI 459 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHH
Confidence 4679999999999998543221 2 34999999998655
No 271
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.81 E-value=6e-05 Score=68.21 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC-CCeEEEEeCCHHHHHHhhHHHHHHHHHHhhhhhccCCCCCCCCCccCCCCeeeeec
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG-AGTVHFQDLSAETIRCTTVPNVLANLEQARERQSRQPESSLTPSRQTLAPSVHFYA 113 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 113 (269)
.+.+|||+|||+|..++.++... ..+|++.|.++++++ ..+.|+..+ ..++.++.
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~-----~A~~~~~~~-------------------g~~v~~v~ 81 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLR-----IAEEKLKEF-------------------SDRVSLFK 81 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHH-----HHHHHTGGG-------------------TTTEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHH-----HHHHHHHhc-------------------CCcEEEEE
Confidence 57899999999999998877653 459999999999984 344444221 13577888
Q ss_pred CCCCCcc
Q 024311 114 GDWEELP 120 (269)
Q Consensus 114 ~dw~~~~ 120 (269)
+|...++
T Consensus 82 ~d~~~l~ 88 (301)
T 1m6y_A 82 VSYREAD 88 (301)
T ss_dssp CCGGGHH
T ss_pred CCHHHHH
Confidence 8876654
No 272
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.78 E-value=0.00012 Score=73.44 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=25.3
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK 56 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ 56 (269)
.||..|..... .-.+..|||.+||+|...+.||..
T Consensus 177 ~LAa~ll~~~~----~~~~~~llDP~CGSGt~lIeAa~~ 211 (703)
T 3v97_A 177 TLAAAIVMRSG----WQPGTPLLDPMCGSGTLLIEAAML 211 (703)
T ss_dssp HHHHHHHHHTT----CCTTSCEEETTCTTSHHHHHHHHH
T ss_pred HHHHHHHHhhC----CCCCCeEEecCCCCcHHHHHHHHH
Confidence 46666655431 225679999999999999888764
No 273
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.76 E-value=2.3e-05 Score=69.46 Aligned_cols=36 Identities=14% Similarity=0.215 Sum_probs=32.5
Q ss_pred CEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 37 KRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 37 ~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
.+|||+|||+|..++.++..|+ +|++.|.++.+...
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l 125 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAAL 125 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHH
Confidence 7999999999999999998887 79999999987643
No 274
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.69 E-value=9.6e-05 Score=66.11 Aligned_cols=39 Identities=26% Similarity=0.300 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCC---eEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAG---TVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~---~Vv~tD~~~~vl~~ 73 (269)
.+.+|||+|||+|..+..++..+.. +|++.|+++.+++.
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~ 83 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGR 83 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHH
Confidence 6789999999999999888876652 29999999999854
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.65 E-value=0.00022 Score=69.47 Aligned_cols=52 Identities=17% Similarity=0.013 Sum_probs=36.3
Q ss_pred HHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc----C---------------CCeEEEEeCCHHHHHHh
Q 024311 19 LVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK----G---------------AGTVHFQDLSAETIRCT 74 (269)
Q Consensus 19 La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~----g---------------a~~Vv~tD~~~~vl~~~ 74 (269)
++++|.+... ...+.+|||.+||+|...+.++.. + ..++++.|+++.+++.+
T Consensus 157 iv~~mv~~l~----p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 157 LIKTIIHLLK----PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp HHHHHHHHHC----CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred HHHHHHHHhc----cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 4555554431 235779999999999877766542 1 13799999999998654
No 276
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.65 E-value=0.00025 Score=63.33 Aligned_cols=60 Identities=20% Similarity=0.142 Sum_probs=45.3
Q ss_pred CCCccCceeeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCH
Q 024311 4 SKPDGFLKCWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSA 68 (269)
Q Consensus 4 g~ye~G~~vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~ 68 (269)
|.-.+|.-+=.|+.-|.+...+. ..-.+.+|||||||+|--+-+|+.. ++..|++.|..-
T Consensus 48 ~~~~~~~YrSRaA~KL~ei~ek~-----~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGv 108 (277)
T 3evf_A 48 GKVDTGVAVSRGTAKLRWFHERG-----YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGR 108 (277)
T ss_dssp TCCSSCBCSSTHHHHHHHHHHTT-----SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred CCccCCCccccHHHHHHHHHHhC-----CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEec
Confidence 44455666778899999888874 2336679999999999999877654 666788888753
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.59 E-value=9.1e-05 Score=65.22 Aligned_cols=47 Identities=11% Similarity=0.184 Sum_probs=34.7
Q ss_pred HHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCe--EEEEeCCHHHHH
Q 024311 19 LVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGT--VHFQDLSAETIR 72 (269)
Q Consensus 19 La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~--Vv~tD~~~~vl~ 72 (269)
+++.+.+... ...+.+|||+|||+|..+. ++. +. + |++.|+++.++.
T Consensus 9 i~~~iv~~~~----~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~ 57 (252)
T 1qyr_A 9 VIDSIVSAIN----PQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAA 57 (252)
T ss_dssp HHHHHHHHHC----CCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHH
T ss_pred HHHHHHHhcC----CCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHH
Confidence 4455554431 2357799999999999888 654 43 6 999999999983
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.58 E-value=0.0018 Score=63.11 Aligned_cols=41 Identities=17% Similarity=0.042 Sum_probs=32.4
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHc----CCCeEEEEeCCHHHHHHh
Q 024311 34 FRGKRVLELSCGYGLPGIFACLK----GAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~----ga~~Vv~tD~~~~vl~~~ 74 (269)
..+.+|||.+||+|..-+.++.. +..+++++|+++.+++.+
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA 264 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLA 264 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHH
Confidence 46789999999999776666543 345899999999988654
No 279
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.58 E-value=0.00045 Score=70.14 Aligned_cols=39 Identities=8% Similarity=-0.006 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC----CCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG----AGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g----a~~Vv~tD~~~~vl~~ 73 (269)
.+.+|||.|||+|...+.++... ..++++.|+++.+++.
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~L 363 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLEL 363 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHH
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHH
Confidence 57899999999998888877643 2479999999988754
No 280
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.51 E-value=0.0012 Score=56.39 Aligned_cols=37 Identities=16% Similarity=0.095 Sum_probs=28.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
+.++|||+||| ..++.+|+....+|+..|.+++..+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ 66 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARM 66 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHH
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 45699999985 67788777533599999999988743
No 281
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.44 E-value=0.0012 Score=64.25 Aligned_cols=45 Identities=18% Similarity=0.201 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCCCCeEEEEEEcc-cccccCcchHHHHHHhhhcCcee
Q 024311 206 KLYLLIKKCLRPPYGVVYLATKK-NYVGFNNAARHLRSLVDEEGIFG 251 (269)
Q Consensus 206 ~L~~~l~~~L~~p~g~~~va~k~-~~fg~~~~~~~F~~~~~~~g~~~ 251 (269)
.+++.+.++|+ |+|++.+.... .-|+.+++...+.+.+-+.+.+.
T Consensus 376 ~Fl~~~l~~Lk-~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~l~ 421 (544)
T 3khk_A 376 AWMLHMLYHLA-PTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLVE 421 (544)
T ss_dssp HHHHHHHHTEE-EEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHhc-cCceEEEEecchhhhcCcchHHHHHHHHHhCCcHh
Confidence 45666667788 78887666544 33432246678888888877643
No 282
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.36 E-value=0.0044 Score=55.83 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~~ 74 (269)
..++||=||-|.|...-.+.+. +..+|++.|++++|++.+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a 123 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFC 123 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHH
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHH
Confidence 4679999999999777666654 457999999999999765
No 283
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.26 E-value=0.0045 Score=57.55 Aligned_cols=35 Identities=14% Similarity=-0.077 Sum_probs=30.4
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCH
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSA 68 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~ 68 (269)
.-.|.+||||||.+|--+-.++..|+ +|++.|..+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~ 243 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGP 243 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhh
Confidence 44799999999999988888888887 899999854
No 284
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.16 E-value=0.00093 Score=59.74 Aligned_cols=50 Identities=26% Similarity=0.209 Sum_probs=40.7
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
.|++.+.... ...|..|||++||+|.++++|+..|. ++++.|+++++++.
T Consensus 223 ~l~~~~i~~~-----~~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~ 272 (297)
T 2zig_A 223 ELAERLVRMF-----SFVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQL 272 (297)
T ss_dssp HHHHHHHHHH-----CCTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred HHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHH
Confidence 4555555442 23688999999999999999999987 89999999999844
No 285
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=96.80 E-value=0.0042 Score=54.69 Aligned_cols=66 Identities=18% Similarity=0.236 Sum_probs=40.8
Q ss_pred CCccEEEEecccccc----CC-HHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEEEeee-cC
Q 024311 187 GGYDVILLTEIPYSV----TS-LKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHLIKEM-TD 260 (269)
Q Consensus 187 ~~fDlIlasD~iY~~----~~-~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~~~~~-~~ 260 (269)
..||+|+. |. +.+ +. .+.+++.+.++|+ |+|++.. + . ....+...+++.||-..++ .-+ .+
T Consensus 172 ~~~D~ifl-D~-fsp~~~p~lw~~~~l~~l~~~L~-pGG~l~t-y-----s---aa~~vrr~L~~aGF~v~~~-~g~~~k 238 (257)
T 2qy6_A 172 QKVDAWFL-DG-FAPAKNPDMWTQNLFNAMARLAR-PGGTLAT-F-----T---SAGFVRRGLQEAGFTMQKR-KGFGRK 238 (257)
T ss_dssp TCEEEEEE-CS-SCTTTCGGGCCHHHHHHHHHHEE-EEEEEEE-S-----C---CBHHHHHHHHHHTEEEEEE-CCSTTC
T ss_pred CeEEEEEE-CC-CCcccChhhcCHHHHHHHHHHcC-CCcEEEE-E-----e---CCHHHHHHHHHCCCEEEeC-CCCCCC
Confidence 37999998 64 222 21 4568999999999 8887652 1 1 1236778888899743333 222 24
Q ss_pred cceEE
Q 024311 261 RDIWK 265 (269)
Q Consensus 261 ~~i~~ 265 (269)
+++-+
T Consensus 239 r~m~~ 243 (257)
T 2qy6_A 239 REMLC 243 (257)
T ss_dssp CCEEE
T ss_pred CceEE
Confidence 55443
No 286
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.58 E-value=0.0044 Score=54.23 Aligned_cols=50 Identities=26% Similarity=0.218 Sum_probs=40.1
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
.|++.+.... ...|..|||..||+|-++++|...|. ++++.|+++..++.
T Consensus 200 ~l~~~~i~~~-----~~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~ 249 (260)
T 1g60_A 200 DLIERIIRAS-----SNPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQ 249 (260)
T ss_dssp HHHHHHHHHH-----CCTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred HHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHH
Confidence 4555554432 24678999999999999999999987 89999999988854
No 287
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.55 E-value=0.024 Score=52.38 Aligned_cols=59 Identities=24% Similarity=0.198 Sum_probs=41.0
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
.||..-+..|.- -.|.+|||+.||.|-=++.++..+. ..|++.|.++.-+ .-++.|+..
T Consensus 135 ~aS~l~~~~L~~--------~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~-----~~l~~~l~r 194 (359)
T 4fzv_A 135 AASLLPVLALGL--------QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRI-----ARLQKILHS 194 (359)
T ss_dssp GGGHHHHHHHCC--------CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHH-----HHHHHHHHH
T ss_pred HHHHHHHHHhCC--------CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHH-----HHHHHHHHH
Confidence 466666655532 2577999999999977766665544 4799999999876 344555543
No 288
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.00 E-value=0.068 Score=48.31 Aligned_cols=48 Identities=19% Similarity=0.115 Sum_probs=32.2
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCC---HHH-HHHHHcCCC--eEEEEeCCH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYG---LPG-IFACLKGAG--TVHFQDLSA 68 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtG---l~g-l~aa~~ga~--~Vv~tD~~~ 68 (269)
.|++||.+.. -..-.|.+|||||||.- .|| .++.+.++. .|+..|+++
T Consensus 95 qlcqyl~~~~---~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~ 148 (344)
T 3r24_A 95 QLCQYLNTLT---LAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLND 148 (344)
T ss_dssp HHHHHHTTSC---CCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSC
T ss_pred HHHHHhcccc---EeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcc
Confidence 5788885531 23447899999999542 344 455555553 899999977
No 289
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.91 E-value=0.029 Score=51.23 Aligned_cols=42 Identities=26% Similarity=0.070 Sum_probs=35.2
Q ss_pred CEEEEEcCCCCHHHHHHHHcC--CCeEEEEeCCHHHHHHhhHHHHHHHH
Q 024311 37 KRVLELSCGYGLPGIFACLKG--AGTVHFQDLSAETIRCTTVPNVLANL 83 (269)
Q Consensus 37 ~~VLELGcGtGl~gl~aa~~g--a~~Vv~tD~~~~vl~~~~~~Nl~~N~ 83 (269)
.+||||.||+|..++.+...| ++.|++.|+++..+ ...+.|.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~-----~~~~~N~ 46 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVAN-----EVYKYNF 46 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHH-----HHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHH-----HHHHHhc
Confidence 589999999999999998888 55799999999887 4455554
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=95.80 E-value=0.011 Score=55.05 Aligned_cols=40 Identities=23% Similarity=0.095 Sum_probs=34.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHh
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~ 74 (269)
..++||=||-|.|...-.+.+...++|++.|++++|++.+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~a 244 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGC 244 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHH
Confidence 4689999999999888777777778999999999999654
No 291
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.43 E-value=0.033 Score=51.56 Aligned_cols=42 Identities=19% Similarity=0.176 Sum_probs=35.3
Q ss_pred CEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHH
Q 024311 37 KRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANL 83 (269)
Q Consensus 37 ~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~ 83 (269)
.+||||-||+|.+++-+...|...|.+.|+++..+ ...+.|.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~-----~t~~~N~ 44 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAI-----NTHAINF 44 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHH-----HHHHHHC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHH-----HHHHHhC
Confidence 48999999999999999889997788999999876 4455554
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.26 E-value=0.032 Score=49.30 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=32.4
Q ss_pred CCCCccCceeeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc
Q 024311 3 SSKPDGFLKCWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK 56 (269)
Q Consensus 3 ~g~ye~G~~vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ 56 (269)
.|.-.+|--.=.|+.-|.+.-.+. ..-.|.+||||||+.|-=+-+|+..
T Consensus 46 ~g~~~~g~yRSRAayKL~EIdeK~-----likpg~~VVDLGaAPGGWSQvAa~~ 94 (269)
T 2px2_A 46 EGNKVGGHPVSRGTAKLRWLVERR-----FVQPIGKVVDLGCGRGGWSYYAATM 94 (269)
T ss_dssp ----CCSCCSSTHHHHHHHHHHTT-----SCCCCEEEEEETCTTSHHHHHHTTS
T ss_pred cCCCcCCCcccHHHHHHHHHHHcC-----CCCCCCEEEEcCCCCCHHHHHHhhh
Confidence 344455555556677776555442 3446889999999999888888765
No 293
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.25 E-value=0.069 Score=49.52 Aligned_cols=41 Identities=10% Similarity=0.019 Sum_probs=32.2
Q ss_pred CCCCccEEEEeccccccC--------------------------------------CHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 185 GEGGYDVILLTEIPYSVT--------------------------------------SLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 185 ~~~~fDlIlasD~iY~~~--------------------------------------~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
..+.||+|+++=++++.+ ++..+++...+.|+ |+|++++..
T Consensus 147 P~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~-pGG~mvl~~ 225 (374)
T 3b5i_A 147 PARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVK-RGGAMFLVC 225 (374)
T ss_dssp CTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEE
Confidence 467999999999999976 33346777788898 889877663
No 294
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=95.02 E-value=0.058 Score=48.10 Aligned_cols=33 Identities=18% Similarity=-0.047 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc------CCCeEEEEeCC
Q 024311 35 RGKRVLELSCGYGLPGIFACLK------GAGTVHFQDLS 67 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~------ga~~Vv~tD~~ 67 (269)
..++|||+|+..|..++.++.. ...+|++.|..
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~Dtf 144 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSF 144 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECS
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECC
Confidence 3559999999999988775532 13589999963
No 295
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=94.72 E-value=0.11 Score=46.54 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
.+..+||.+||.|--+..++..+. +|++.|.+++++.
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~~g-~VigiD~Dp~Ai~ 58 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILERGG-RVIGLDQDPEAVA 58 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred CCCEEEEeCCCCcHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 577999999999988887777654 8999999999984
No 296
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=94.70 E-value=0.23 Score=46.21 Aligned_cols=19 Identities=21% Similarity=0.260 Sum_probs=15.7
Q ss_pred CCEEEEEcCCCCHHHHHHH
Q 024311 36 GKRVLELSCGYGLPGIFAC 54 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~aa 54 (269)
..+|+||||++|-.++.+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v 71 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTV 71 (384)
T ss_dssp EEEEEEETCCSSHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHH
Confidence 5799999999998876654
No 297
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.51 E-value=0.065 Score=48.64 Aligned_cols=46 Identities=20% Similarity=0.127 Sum_probs=39.0
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANL 83 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~ 83 (269)
..++.+||||.||+|..++.+.+.|.+.|++.|+++..+ ...+.|.
T Consensus 8 ~~~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~-----~t~~~N~ 53 (327)
T 2c7p_A 8 QLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQ-----EVYEMNF 53 (327)
T ss_dssp TTTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHH-----HHHHHHH
T ss_pred ccCCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHH-----HHHHHHc
Confidence 346789999999999999999999998899999999877 4566665
No 298
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=93.88 E-value=1.7 Score=41.79 Aligned_cols=53 Identities=15% Similarity=0.133 Sum_probs=35.4
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHc--------------CCCeEEEEeCCHHHHHHh
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLK--------------GAGTVHFQDLSAETIRCT 74 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~--------------ga~~Vv~tD~~~~vl~~~ 74 (269)
.++++|.+... ...+.+|+|-.||+|..-+.+... ....+++.|.++.+.+.+
T Consensus 204 ~Vv~lmv~l~~----p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la 270 (530)
T 3ufb_A 204 PVVRFMVEVMD----PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLV 270 (530)
T ss_dssp HHHHHHHHHHC----CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHH
T ss_pred HHHHHHHHhhc----cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHH
Confidence 45566665542 235679999999999554444321 013699999999988654
No 299
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.57 E-value=1.1 Score=40.46 Aligned_cols=44 Identities=14% Similarity=-0.023 Sum_probs=35.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCC--CeE-EEEeCCHHHHHHhhHHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGA--GTV-HFQDLSAETIRCTTVPNVLANL 83 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga--~~V-v~tD~~~~vl~~~~~~Nl~~N~ 83 (269)
+..+|+||-||+|..++.+...|. ..| .+.|+++... ...+.|.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~-----~ty~~N~ 55 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIAN-----KIYSKNF 55 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHH-----HHHHHHH
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHH-----HHHHHHC
Confidence 345999999999999988888884 567 7999999876 4556665
No 300
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=93.54 E-value=0.046 Score=49.29 Aligned_cols=61 Identities=16% Similarity=0.119 Sum_probs=45.8
Q ss_pred CCCCccCceeeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHH-HHHcCCCeEEEEeCCH
Q 024311 3 SSKPDGFLKCWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIF-ACLKGAGTVHFQDLSA 68 (269)
Q Consensus 3 ~g~ye~G~~vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~-aa~~ga~~Vv~tD~~~ 68 (269)
.|.-.+|--+=.++.-|.+...+. ....+.+||||||++|--+-. +.+.|+++|++.|...
T Consensus 67 ~g~~~~g~y~SR~~~KL~ei~~~~-----~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~ 128 (321)
T 3lkz_A 67 EGNVTGGHPVSRGTAKLRWLVERR-----FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGG 128 (321)
T ss_dssp HTCCSSCCCSSTHHHHHHHHHHTT-----SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCS
T ss_pred cCcCcCCCccchHHHHHHHHHHhc-----CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCC
Confidence 355566767777888887777663 234677999999999988874 4457888999999854
No 301
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=93.31 E-value=0.093 Score=46.81 Aligned_cols=52 Identities=23% Similarity=0.192 Sum_probs=39.4
Q ss_pred eeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHH-HcCCCeEEEEeCCH
Q 024311 12 CWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFAC-LKGAGTVHFQDLSA 68 (269)
Q Consensus 12 vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa-~~ga~~Vv~tD~~~ 68 (269)
+=.|+.-|.+...+. ....+.+|||||||+|--+-+|+ ..++..|++.|...
T Consensus 72 rSRAAfKL~ei~eK~-----~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~ 124 (282)
T 3gcz_A 72 VSRGSAKLRWMEERG-----YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGV 124 (282)
T ss_dssp SSTHHHHHHHHHHTT-----SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred ecHHHHHHHHHHHhc-----CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEecc
Confidence 345777787777664 24467799999999998888777 45777899888854
No 302
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.48 E-value=0.059 Score=61.07 Aligned_cols=39 Identities=15% Similarity=0.099 Sum_probs=14.4
Q ss_pred CCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEE
Q 024311 187 GGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLAT 226 (269)
Q Consensus 187 ~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~ 226 (269)
..||+||++.+++........++.++++|+ |+|.+++..
T Consensus 1310 ~~ydlvia~~vl~~t~~~~~~l~~~~~lL~-p~G~l~~~e 1348 (2512)
T 2vz8_A 1310 GKADLLVCNCALATLGDPAVAVGNMAATLK-EGGFLLLHT 1348 (2512)
T ss_dssp --CCEEEEECC---------------------CCEEEEEE
T ss_pred CceeEEEEcccccccccHHHHHHHHHHhcC-CCcEEEEEe
Confidence 469999999999988778888888899998 888877653
No 303
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=90.81 E-value=0.5 Score=40.90 Aligned_cols=67 Identities=10% Similarity=0.193 Sum_probs=47.4
Q ss_pred CCCCccEEEEeccccccC---------------CHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCc
Q 024311 185 GEGGYDVILLTEIPYSVT---------------SLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGI 249 (269)
Q Consensus 185 ~~~~fDlIlasD~iY~~~---------------~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~ 249 (269)
..++||+|+. |..|... .....++.+.++|+ |+|.++|...... ...++..+++.||
T Consensus 20 ~~~~vdlI~~-DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk-~~g~i~v~~~d~~------~~~~~~~~~~~gf 91 (260)
T 1g60_A 20 ENKSVQLAVI-DPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLD-KDGSLYIFNTPFN------CAFICQYLVSKGM 91 (260)
T ss_dssp CTTCEEEEEE-CCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEE-EEEEEEEEECHHH------HHHHHHHHHHTTC
T ss_pred cccccCEEEE-CCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhc-CCeEEEEEcCcHH------HHHHHHHHHhhcc
Confidence 3468999998 9999865 34556777788898 8999998753321 2345667778887
Q ss_pred -eeEEEEeeec
Q 024311 250 -FGAHLIKEMT 259 (269)
Q Consensus 250 -~~~~~~~~~~ 259 (269)
+...++|...
T Consensus 92 ~~~~~iiW~K~ 102 (260)
T 1g60_A 92 IFQNWITWDKR 102 (260)
T ss_dssp EEEEEEEECCC
T ss_pred ceeEEEEEEec
Confidence 5667777544
No 304
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=90.79 E-value=0.25 Score=43.32 Aligned_cols=50 Identities=24% Similarity=0.254 Sum_probs=37.2
Q ss_pred ccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHH-HHHHcCCCeEEEEeCCH
Q 024311 14 ESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGI-FACLKGAGTVHFQDLSA 68 (269)
Q Consensus 14 ~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl-~aa~~ga~~Vv~tD~~~ 68 (269)
.|+.-|.+...+. ....+.+||||||++|--+- ++.+.|+++|++.|...
T Consensus 62 Ra~~KL~ei~ek~-----~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~ 112 (267)
T 3p8z_A 62 RGSAKLQWFVERN-----MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGG 112 (267)
T ss_dssp THHHHHHHHHHTT-----SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCS
T ss_pred hHHHHHHHHHHhc-----CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCC
Confidence 4566666555543 23467799999999998886 45567888999999854
No 305
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=90.16 E-value=0.52 Score=43.25 Aligned_cols=37 Identities=16% Similarity=0.165 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl 71 (269)
.+..|||+|.|.|.+...++.. .+++|++.+.++..+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~ 95 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLY 95 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHH
Confidence 4679999999999988776653 456899999999876
No 306
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=90.09 E-value=0.51 Score=42.36 Aligned_cols=59 Identities=20% Similarity=0.165 Sum_probs=44.9
Q ss_pred CCccCceeeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHH-cCCCeEEEEeCCH
Q 024311 5 KPDGFLKCWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACL-KGAGTVHFQDLSA 68 (269)
Q Consensus 5 ~ye~G~~vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~-~ga~~Vv~tD~~~ 68 (269)
.-.+|.-.=.|++-|.+...+. ....+++||||||++|--+-+|+. .++..|++.|...
T Consensus 56 ~~~~g~yrSRaa~KL~ei~ek~-----l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~ 115 (300)
T 3eld_A 56 RTDVGISVSRGAAKIRWLHERG-----YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGI 115 (300)
T ss_dssp CSSSCCCSSTTHHHHHHHHHHT-----SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred CccCCCccchHHHHHHHHHHhC-----CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecc
Confidence 3344566667888888888762 345889999999999988877775 4777898888854
No 307
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.01 E-value=1 Score=40.27 Aligned_cols=72 Identities=18% Similarity=0.290 Sum_probs=48.3
Q ss_pred CCCCccEEEEeccccccC---------------CHHHHHHHHHHhcCCCCeEEEEEEccccc-cc----CcchHHHHHHh
Q 024311 185 GEGGYDVILLTEIPYSVT---------------SLKKLYLLIKKCLRPPYGVVYLATKKNYV-GF----NNAARHLRSLV 244 (269)
Q Consensus 185 ~~~~fDlIlasD~iY~~~---------------~~~~L~~~l~~~L~~p~g~~~va~k~~~f-g~----~~~~~~F~~~~ 244 (269)
..++||+|+. |..|... .+...+..++++|+ |+|.++|.....+. |. -......++.+
T Consensus 30 ~~~svDlI~t-DPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk-~~G~i~i~~~d~~~~g~~~~~~~~~~~i~~~~ 107 (323)
T 1boo_A 30 PEESISLVMT-SPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLK-PDGSFVVDFGGAYMKGVPARSIYNFRVLIRMI 107 (323)
T ss_dssp CSSCEEEEEE-CCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEECCCEETTEEEECCHHHHHHHHHH
T ss_pred CCCCeeEEEE-CCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCc-CCcEEEEEECCEecCCCcccccchHHHHHHHH
Confidence 3568999998 9999765 35667778888998 89999987554321 10 00134455667
Q ss_pred hhcCc-eeEEEEeee
Q 024311 245 DEEGI-FGAHLIKEM 258 (269)
Q Consensus 245 ~~~g~-~~~~~~~~~ 258 (269)
++.|+ +...++|..
T Consensus 108 ~~~Gf~~~~~iiW~k 122 (323)
T 1boo_A 108 DEVGFFLAEDFYWFN 122 (323)
T ss_dssp HTTCCEEEEEEEEEC
T ss_pred HhCCCEEEEEEEEec
Confidence 88886 455677754
No 308
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=88.88 E-value=0.85 Score=42.35 Aligned_cols=47 Identities=9% Similarity=0.075 Sum_probs=36.2
Q ss_pred CCCCEEEEEcCCCCHHHHHHH-Hc-C-CCeEEEEeCCHHHHHHhhHHHHHHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFAC-LK-G-AGTVHFQDLSAETIRCTTVPNVLANLEQ 85 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa-~~-g-a~~Vv~tD~~~~vl~~~~~~Nl~~N~~~ 85 (269)
-.+..|+|+||+.|..++.++ .. + ..+|++-+-+|... +.++.|+..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~-----~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINL-----QTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHH-----HHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHH-----HHHHHHHHh
Confidence 377899999999999998766 43 3 26999999999988 444555543
No 309
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=88.51 E-value=0.82 Score=40.97 Aligned_cols=49 Identities=12% Similarity=0.122 Sum_probs=39.0
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
.|++++.... .-.|..|||--||+|-++++|..+|. +.++.|+++...+
T Consensus 240 ~l~~~~i~~~-----~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~ 288 (323)
T 1boo_A 240 KLPEFFIRML-----TEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVA 288 (323)
T ss_dssp HHHHHHHHHH-----CCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred HHHHHHHHHh-----CCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHH
Confidence 4555554432 23678999999999999999999987 8999999998763
No 310
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=88.29 E-value=0.22 Score=45.88 Aligned_cols=40 Identities=10% Similarity=-0.002 Sum_probs=28.9
Q ss_pred CCCCccEEEEeccccccCCHH---------------------------------HHHHHHHHhcCCCCeEEEEE
Q 024311 185 GEGGYDVILLTEIPYSVTSLK---------------------------------KLYLLIKKCLRPPYGVVYLA 225 (269)
Q Consensus 185 ~~~~fDlIlasD~iY~~~~~~---------------------------------~L~~~l~~~L~~p~g~~~va 225 (269)
..+.+|+|.++=++++.+..+ .+++...+-|+ |+|++++.
T Consensus 136 p~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~-pGG~mvl~ 208 (359)
T 1m6e_X 136 PRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVV-PGGRMVLT 208 (359)
T ss_dssp CTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBC-TTCEEEEE
T ss_pred CCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEE
Confidence 456888888888888755433 34677778898 88887765
No 311
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=88.03 E-value=12 Score=33.96 Aligned_cols=66 Identities=20% Similarity=0.166 Sum_probs=39.6
Q ss_pred ccCceeeccHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHH
Q 024311 7 DGFLKCWESSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLAN 82 (269)
Q Consensus 7 e~G~~vW~as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N 82 (269)
.-.+..|+|+-. ||..+.... -.+.+||-++.+-|.+++.++..+. ..++| .-+-+.++..|+.+|
T Consensus 16 ~~~l~a~da~d~---~ll~~~~~~---~~~~~~~~~~d~~gal~~~~~~~~~--~~~~d--s~~~~~~~~~n~~~~ 81 (375)
T 4dcm_A 16 VNPLQAWEAADE---YLLQQLDDT---EIRGPVLILNDAFGALSCALAEHKP--YSIGD--SYISELATRENLRLN 81 (375)
T ss_dssp SCSCCSCCHHHH---HHHHTTTTC---CCCSCEEEECCSSSHHHHHTGGGCC--EEEES--CHHHHHHHHHHHHHT
T ss_pred CCCCCccchHHH---HHHHhhhhc---cCCCCEEEECCCCCHHHHhhccCCc--eEEEh--HHHHHHHHHHHHHHc
Confidence 356788998864 444432111 1456899999999998887765443 44566 223334444555444
No 312
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=86.62 E-value=0.76 Score=40.78 Aligned_cols=42 Identities=12% Similarity=0.021 Sum_probs=34.3
Q ss_pred CEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHH
Q 024311 37 KRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRCTTVPNVLANL 83 (269)
Q Consensus 37 ~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~ 83 (269)
.+||||-||+|..++.+-..|..-|.+.|+++... ...+.|.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~-----~ty~~N~ 42 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIW-----KTYESNH 42 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTH-----HHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHH-----HHHHHHC
Confidence 47999999999888888888997788999998776 4455554
No 313
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.56 E-value=1.7 Score=38.99 Aligned_cols=73 Identities=15% Similarity=0.272 Sum_probs=49.4
Q ss_pred CCCCccEEEEeccccccC------------CHHHHHHHHHHhcCCCCeEEEEEEcccccc-cC-cchHHHHHHhhhcC-c
Q 024311 185 GEGGYDVILLTEIPYSVT------------SLKKLYLLIKKCLRPPYGVVYLATKKNYVG-FN-NAARHLRSLVDEEG-I 249 (269)
Q Consensus 185 ~~~~fDlIlasD~iY~~~------------~~~~L~~~l~~~L~~p~g~~~va~k~~~fg-~~-~~~~~F~~~~~~~g-~ 249 (269)
..++||+|+. |..|... .....+..+.++|+ |+|.++|....++.+ .. ..+...++.++..| +
T Consensus 55 ~~~svDlI~t-DPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk-~~G~i~i~~~~~~~~~~~~~~l~~l~~~i~~~G~~ 132 (319)
T 1eg2_A 55 PDDSVQLIIC-DPPYNIMLADWDDHMDYIGWAKRWLAEAERVLS-PTGSIAIFGGLQYQGEAGSGDLISIISHMRQNSKM 132 (319)
T ss_dssp CTTCEEEEEE-CCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEE-EEEEEEEEECSCCCCCTTBCCHHHHHHHHHHHCCC
T ss_pred ccCCcCEEEE-CCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcC-CCeEEEEEcCcccccccccccHHHHHHHHhCcccc
Confidence 3458999999 9999764 33455666778898 899999887665431 00 12355667777776 4
Q ss_pred -eeEEEEeeec
Q 024311 250 -FGAHLIKEMT 259 (269)
Q Consensus 250 -~~~~~~~~~~ 259 (269)
+...++|...
T Consensus 133 ~~~~~IIW~K~ 143 (319)
T 1eg2_A 133 LLANLIIWNYP 143 (319)
T ss_dssp EEEEEEEEECS
T ss_pred eeEEEEEEECC
Confidence 6677778643
No 314
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.51 E-value=1.3 Score=39.76 Aligned_cols=50 Identities=22% Similarity=0.322 Sum_probs=41.1
Q ss_pred HHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCH---HHHH
Q 024311 17 IDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSA---ETIR 72 (269)
Q Consensus 17 ~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~---~vl~ 72 (269)
..|++++.... .-.|..|||--||+|-++++|..+|. +.++.|+++ +..+
T Consensus 229 ~~l~~~~i~~~-----~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~ 281 (319)
T 1eg2_A 229 AAVIERLVRAL-----SHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQ 281 (319)
T ss_dssp HHHHHHHHHHH-----SCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHH
T ss_pred HHHHHHHHHHh-----CCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHH
Confidence 56777776653 23678999999999999999999986 899999999 7664
No 315
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=84.36 E-value=1.7 Score=38.74 Aligned_cols=39 Identities=18% Similarity=0.090 Sum_probs=33.1
Q ss_pred CCCCCEEEEEcCCCCHHHHHHHHcCCCe--EEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIFACLKGAGT--VHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa~~ga~~--Vv~tD~~~~vl 71 (269)
.-...+||||-||.|-.++.+...|..- |.+.|+++...
T Consensus 13 ~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~ 53 (295)
T 2qrv_A 13 KRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSI 53 (295)
T ss_dssp CCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHH
T ss_pred cCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHH
Confidence 3466799999999999998888888865 68999999876
No 316
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=83.62 E-value=1.6 Score=39.41 Aligned_cols=42 Identities=21% Similarity=0.127 Sum_probs=33.6
Q ss_pred CEEEEEcCCCCHHHHHHHHcCC--CeEEEEeCCHHHHHHhhHHHHHHHH
Q 024311 37 KRVLELSCGYGLPGIFACLKGA--GTVHFQDLSAETIRCTTVPNVLANL 83 (269)
Q Consensus 37 ~~VLELGcGtGl~gl~aa~~ga--~~Vv~tD~~~~vl~~~~~~Nl~~N~ 83 (269)
.+|+||-||+|..++.+...|. +.|.+.|+++... ...+.|.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~-----~ty~~N~ 47 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVAN-----SVYKHNF 47 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHH-----HHHHHHC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHH-----HHHHHhC
Confidence 3899999999988888887786 5688999999876 4455554
No 317
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=80.80 E-value=5.1 Score=35.05 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=44.0
Q ss_pred CCCCccEEEEeccccccCC---------------------HHHHHHHHHHhcCCCCeEEEEEEccccc-----ccC---c
Q 024311 185 GEGGYDVILLTEIPYSVTS---------------------LKKLYLLIKKCLRPPYGVVYLATKKNYV-----GFN---N 235 (269)
Q Consensus 185 ~~~~fDlIlasD~iY~~~~---------------------~~~L~~~l~~~L~~p~g~~~va~k~~~f-----g~~---~ 235 (269)
..++||+|++ |..|.... +..+++.+.++|+ |+|.+++...-.+. |.. .
T Consensus 37 ~~~s~DlIvt-dPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk-~~G~l~i~~~d~~~~~~~~g~~~~~~ 114 (297)
T 2zig_A 37 PEASVHLVVT-SPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLV-PGGRLVIVVGDVAVARRRFGRHLVFP 114 (297)
T ss_dssp CTTCEEEEEE-CCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEECCEEEECC----EEEEC
T ss_pred CCCceeEEEE-CCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcC-CCcEEEEEECCCccccccCCcccccc
Confidence 3468999998 88886421 1345667778898 89998887542221 100 0
Q ss_pred chHHHHHHhhhcCc-eeEEEEeee
Q 024311 236 AARHLRSLVDEEGI-FGAHLIKEM 258 (269)
Q Consensus 236 ~~~~F~~~~~~~g~-~~~~~~~~~ 258 (269)
-.......+++.|+ +...++|.-
T Consensus 115 ~~~~l~~~~~~~Gf~~~~~iiW~K 138 (297)
T 2zig_A 115 LHADIQVRCRKLGFDNLNPIIWHK 138 (297)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEC
T ss_pred cHHHHHHHHHHcCCeeeccEEEeC
Confidence 01346667888897 455666753
No 318
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=77.41 E-value=2.6 Score=38.36 Aligned_cols=38 Identities=24% Similarity=0.197 Sum_probs=28.3
Q ss_pred CCCCEEEEEcCCC-CHHHHHHHH-cCCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFACL-KGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa~-~ga~~Vv~tD~~~~vl 71 (269)
..|.+||-+|||. |+..+.+|+ .|+.+|+++|.+++-+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 223 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERL 223 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 4788999999864 555544443 6877899999988755
No 319
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=75.41 E-value=3.4 Score=39.35 Aligned_cols=37 Identities=16% Similarity=0.077 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl 71 (269)
...+||||-||+|..++.+...|..-|.+.|+++...
T Consensus 87 ~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~ 123 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAV 123 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHH
T ss_pred ccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHH
Confidence 4569999999999888888888887789999999876
No 320
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=73.26 E-value=8.1 Score=34.67 Aligned_cols=37 Identities=19% Similarity=0.099 Sum_probs=27.2
Q ss_pred CCCEEEEEc-CC-CCHHHHHHHHc-CCCeEEEEeCCHHHH
Q 024311 35 RGKRVLELS-CG-YGLPGIFACLK-GAGTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELG-cG-tGl~gl~aa~~-ga~~Vv~tD~~~~vl 71 (269)
.|.+||=.| +| .|+..+.+|+. +..+|+++|.+++-+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~ 210 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ 210 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 578999998 44 36666666664 455999999988654
No 321
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=73.15 E-value=4 Score=36.63 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=28.6
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl~ 72 (269)
...|.+||-+|||. |+..+.+| ..|+.+|+++|.+++-++
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~ 229 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLE 229 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 34688999999864 54444444 368878999999887653
No 322
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=70.58 E-value=5.7 Score=35.98 Aligned_cols=39 Identities=26% Similarity=0.279 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCCC-CHHHHHHHH-cCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFACL-KGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa~-~ga~~Vv~tD~~~~vl~ 72 (269)
-.|.+||=+|||. |+..+.+|+ .|+++|+++|.+++-++
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~ 224 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLA 224 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHH
Confidence 4788999999754 544444443 68878999999887553
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=70.18 E-value=6 Score=35.27 Aligned_cols=39 Identities=31% Similarity=0.427 Sum_probs=27.7
Q ss_pred CCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl~ 72 (269)
..|.+||-+|||. |+..+.+| ..|+++|+++|.+++-++
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 210 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLS 210 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 4688999999863 44443333 368778999999887553
No 324
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=62.42 E-value=31 Score=29.54 Aligned_cols=39 Identities=21% Similarity=0.257 Sum_probs=30.5
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
+++||.+|==|++.|+=- ..++..|+ +|+++|.+++-++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~ 45 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLN 45 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHH
Confidence 468999999999988622 23456788 8999999988764
No 325
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=62.24 E-value=7.1 Score=38.97 Aligned_cols=43 Identities=23% Similarity=0.220 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC------CCeEEEEeCCHHHHHHhhHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG------AGTVHFQDLSAETIRCTTVPNVLAN 82 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g------a~~Vv~tD~~~~vl~~~~~~Nl~~N 82 (269)
+..+||||-||+|-+++-+.+.| ..-+.+.|+++..+ ...++|
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~-----~Ty~~N 259 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFAC-----QSLKYN 259 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHH-----HHHHHH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHH-----HHHHHH
Confidence 44589999999998876665554 34678999999887 445555
No 326
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=60.87 E-value=9.1 Score=33.98 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=27.2
Q ss_pred CCCCEEEEEcCCC-CHHHHHHHH-cCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFACL-KGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa~-~ga~~Vv~tD~~~~vl~ 72 (269)
-.|.+||=+|||. |+..+.+|+ .|+.+|+++|.+++-++
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~ 205 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCD 205 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 4688999998753 444433333 67778999999887553
No 327
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=59.85 E-value=9.2 Score=35.44 Aligned_cols=44 Identities=14% Similarity=-0.029 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcC--CCe----EEEEeCCHHHHHHhhHHHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKG--AGT----VHFQDLSAETIRCTTVPNVLANL 83 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~g--a~~----Vv~tD~~~~vl~~~~~~Nl~~N~ 83 (269)
+..+||||-||+|-.++.+-..| ..- |.+.|.++..+ .....|.
T Consensus 9 ~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~-----~ty~~n~ 58 (403)
T 4dkj_A 9 KVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAI-----VSYVAIH 58 (403)
T ss_dssp EEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHH-----HHHHHHH
T ss_pred ccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHH-----HHHHHHc
Confidence 44599999999998887777766 344 88899999876 4556665
No 328
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=59.19 E-value=18 Score=31.50 Aligned_cols=39 Identities=13% Similarity=0.093 Sum_probs=30.7
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
.++||.+|==|++.|+=- ..++..|+ +|+++|.+++.++
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~ 67 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLD 67 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHH
Confidence 479999999999888532 33456788 8999999988763
No 329
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=58.79 E-value=12 Score=38.89 Aligned_cols=38 Identities=16% Similarity=0.070 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl 71 (269)
....++|||-||+|.+++-+.+.|. .-|.+.|+++...
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~ 576 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAA 576 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHH
T ss_pred CCCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHH
Confidence 3556999999999998888888886 5688999999876
No 330
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=58.32 E-value=17 Score=33.70 Aligned_cols=52 Identities=15% Similarity=0.027 Sum_probs=37.7
Q ss_pred cHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHH--HHHcCCCeEEEEeCC
Q 024311 15 SSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIF--ACLKGAGTVHFQDLS 67 (269)
Q Consensus 15 as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~--aa~~ga~~Vv~tD~~ 67 (269)
+++.||-.+......+. .++..+|+=+|+|+.-.+++ +...|+++|++.|.+
T Consensus 168 a~V~lAall~al~l~g~-~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 168 AIVVLAAIFNSLKLLKK-SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp HHHHHHHHHHHHHTTTC-CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHHHHHHHHHHHHHhCC-CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 45667777665543333 67889999999998766643 334688899999986
No 331
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=57.91 E-value=13 Score=32.00 Aligned_cols=40 Identities=25% Similarity=0.258 Sum_probs=31.3
Q ss_pred CCCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl~ 72 (269)
+.++||.+|==|++.|+=- ..++..|+ +|+++|.+++-++
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~ 47 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLA 47 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHH
Confidence 4679999999999888532 33556788 8999999988764
No 332
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=56.34 E-value=16 Score=33.31 Aligned_cols=39 Identities=15% Similarity=0.148 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHc-CC-CeEEEEeCCHHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLK-GA-GTVHFQDLSAETIRC 73 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~-ga-~~Vv~tD~~~~vl~~ 73 (269)
.|..++|..||.|--+.+++.. +. .+|++.|.+++++..
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~ 97 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAV 97 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHH
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHH
Confidence 5789999999999888766543 43 589999999998843
No 333
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=56.23 E-value=11 Score=33.71 Aligned_cols=39 Identities=23% Similarity=0.403 Sum_probs=26.9
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
...|.+||=+|||. |+..+.+| ..|+.+|+++|.+++-+
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~ 230 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKF 230 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 34688999999753 44443333 36777899999988655
No 334
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=55.88 E-value=12 Score=33.66 Aligned_cols=36 Identities=14% Similarity=0.036 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHH----cCCCeEEEEeCCHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACL----KGAGTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~----~ga~~Vv~tD~~~~vl 71 (269)
.|.+||=+|+|+|-.|+++.+ .|+ +|+++|.+++-+
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~ 209 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQA 209 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESSHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 577999998888888876543 688 899999988655
No 335
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=55.48 E-value=11 Score=33.78 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=26.9
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
...|.+||=+|||. |+..+.+| ..|+.+|+++|.+++-+
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 229 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKF 229 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH
Confidence 34688999999753 44443333 36887899999987654
No 336
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=54.51 E-value=18 Score=32.11 Aligned_cols=39 Identities=23% Similarity=0.340 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl~ 72 (269)
-.|.+||=+|||. |+..+.+| ..|+++|+++|.+++-++
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 218 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLK 218 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 4688999999853 44333333 368866999999987653
No 337
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=53.96 E-value=31 Score=31.77 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCCHHH--HHHHH------cCCCeEEEEeCCHHHH
Q 024311 36 GKRVLELSCGYGLPG--IFACL------KGAGTVHFQDLSAETI 71 (269)
Q Consensus 36 ~~~VLELGcGtGl~g--l~aa~------~ga~~Vv~tD~~~~vl 71 (269)
..+|+|+|+|.|.+. ++-+. ....++++.+.++...
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr 124 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLR 124 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHH
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHH
Confidence 458999999999665 33221 1234899999998654
No 338
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=53.78 E-value=17 Score=32.10 Aligned_cols=36 Identities=28% Similarity=0.278 Sum_probs=26.6
Q ss_pred CCCEEEEEcCCCCHHHHHH---H-HcCCCeEEEEeCCHHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFA---C-LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~a---a-~~ga~~Vv~tD~~~~vl~ 72 (269)
.|.+||=+|+| ..|+++ + ..|+.+|+++|.+++-++
T Consensus 167 ~g~~VlV~GaG--~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~ 206 (348)
T 2d8a_A 167 SGKSVLITGAG--PLGLLGIAVAKASGAYPVIVSEPSDFRRE 206 (348)
T ss_dssp TTCCEEEECCS--HHHHHHHHHHHHTTCCSEEEECSCHHHHH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 88999999994 445433 3 367768999999887553
No 339
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=53.51 E-value=20 Score=31.52 Aligned_cols=39 Identities=18% Similarity=0.170 Sum_probs=28.3
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHHH-cCCCeEEEEeCCHHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIFACL-KGAGTVHFQDLSAETIR 72 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~aa~-~ga~~Vv~tD~~~~vl~ 72 (269)
...|.+||=.|||. |+..+.+|+ .|+ +|+++|.+++-++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~ 204 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLN 204 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHH
Confidence 34788999999864 555544443 687 9999999987553
No 340
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=53.00 E-value=59 Score=27.02 Aligned_cols=38 Identities=32% Similarity=0.428 Sum_probs=28.9
Q ss_pred CCCCCEEEEEcC-CCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSC-GYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGc-GtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=.|+ |.|+-. ..++..|+ +|+++|.+++-+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~ 60 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRL 60 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHH
Confidence 478999999998 677643 22445787 899999998765
No 341
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=51.90 E-value=17 Score=31.21 Aligned_cols=38 Identities=24% Similarity=0.229 Sum_probs=29.5
Q ss_pred CCCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAET 70 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~v 70 (269)
..|+||++|==|++.|+=- ..++..|+ +|+++|.+++-
T Consensus 7 dlf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~ 47 (242)
T 4b79_A 7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADG 47 (242)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTS
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHH
Confidence 3579999999999998532 33556788 89999998753
No 342
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=51.87 E-value=18 Score=31.69 Aligned_cols=48 Identities=25% Similarity=0.286 Sum_probs=35.4
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
.|+++|..... . ...+.+|.=||.|.+++.+. ++++++.|+|++++..
T Consensus 23 ~l~~~i~~~lp--~---~~~~yvEpF~GggaV~~~~~---~~~~i~ND~n~~Lin~ 70 (284)
T 2dpm_A 23 QLLPVIRELIP--K---TYNRYFEPFVGGGALFFDLA---PKDAVINDFNAELINC 70 (284)
T ss_dssp GGHHHHHHHSC--S---SCSCEEETTCTTCHHHHHHC---CSEEEEEESCHHHHHH
T ss_pred HHHHHHHHHhc--c---ccCEEEeecCCccHHHHhhh---ccceeeeecchHHHHH
Confidence 35667766541 1 24689999999998877653 3589999999998764
No 343
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=50.79 E-value=27 Score=31.17 Aligned_cols=39 Identities=33% Similarity=0.319 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl~ 72 (269)
-.|.+||=.|+|. |+..+.+| ..|+.+|+++|.+++-++
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 221 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRR 221 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 4688999999853 33333333 368879999999987553
No 344
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=50.18 E-value=26 Score=32.31 Aligned_cols=52 Identities=13% Similarity=-0.020 Sum_probs=35.9
Q ss_pred cHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHH--HHHcCCCeEEEEeCC
Q 024311 15 SSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIF--ACLKGAGTVHFQDLS 67 (269)
Q Consensus 15 as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~--aa~~ga~~Vv~tD~~ 67 (269)
+++.+|-.+......+. .+++.+|+=+|+|..-.+++ +...|+++|++.|.+
T Consensus 172 asV~lAal~~A~~i~g~-~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 172 AVVVSAAFLNALKLTEK-KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp HHHHHHHHHHHHHHHTC-CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHHHHHHHHHHHHHhCC-CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45556665554432232 67899999999998755543 334688899999997
No 345
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=49.74 E-value=88 Score=25.62 Aligned_cols=39 Identities=26% Similarity=0.327 Sum_probs=28.8
Q ss_pred CCCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=-|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~ 46 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAA 46 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHH
Confidence 45789999999987664331 2345687 799999998766
No 346
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=49.23 E-value=8.6 Score=34.08 Aligned_cols=48 Identities=17% Similarity=0.105 Sum_probs=29.2
Q ss_pred CCCCCCCEEEEEcCC-CCHHH-HHHHHcCCCeEEEEeCCHHHHHHhhHHHHHHHH
Q 024311 31 QLSFRGKRVLELSCG-YGLPG-IFACLKGAGTVHFQDLSAETIRCTTVPNVLANL 83 (269)
Q Consensus 31 ~~~~~~~~VLELGcG-tGl~g-l~aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~ 83 (269)
+..+++++||=+||| .|-.- ..+++.|..++++.|.+.-- ..|+.+++
T Consensus 31 q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve-----~sNL~Rq~ 80 (292)
T 3h8v_A 31 YEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVE-----LANMNRLF 80 (292)
T ss_dssp -CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC--------------
T ss_pred HHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccC-----hhhccccc
Confidence 456788999999998 35333 44677898999999987522 26766643
No 347
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=49.22 E-value=29 Score=31.34 Aligned_cols=38 Identities=26% Similarity=0.222 Sum_probs=27.5
Q ss_pred CCCCCEEEEEcCCCCHHHHHH---H-HcCCCeEEEEeCCHHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIFA---C-LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~a---a-~~ga~~Vv~tD~~~~vl~ 72 (269)
.-.|.+||=+||| -.|+++ | ..|+.+|+++|.+++-++
T Consensus 211 ~~~g~~VlV~GaG--~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 252 (404)
T 3ip1_A 211 IRPGDNVVILGGG--PIGLAAVAILKHAGASKVILSEPSEVRRN 252 (404)
T ss_dssp CCTTCEEEEECCS--HHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred CCCCCEEEEECCC--HHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 3478899999985 455443 3 368879999999887553
No 348
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=49.10 E-value=22 Score=31.68 Aligned_cols=39 Identities=26% Similarity=0.486 Sum_probs=26.8
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
...|.+||=+|||. |+..+.+| ..|+++|+++|.+++-+
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 233 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKF 233 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 34688999999752 33333333 36877899999988654
No 349
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=49.00 E-value=23 Score=37.99 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHcCC-CeEEEEeCCHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFACLKGA-GTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa~~ga-~~Vv~tD~~~~vl 71 (269)
+..+||||-||+|.+++-+.+.|. .-|.+.|+++...
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~ 887 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAA 887 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHH
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHH
Confidence 456899999999998888888886 5688999999876
No 350
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=48.90 E-value=1e+02 Score=25.67 Aligned_cols=38 Identities=18% Similarity=0.152 Sum_probs=29.2
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~ 48 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERL 48 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHH
Confidence 468999999999888543 22445787 899999998765
No 351
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=48.39 E-value=20 Score=31.60 Aligned_cols=38 Identities=24% Similarity=0.202 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCCC--HHHHHH-HHc-CCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGYG--LPGIFA-CLK-GAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGtG--l~gl~a-a~~-ga~~Vv~tD~~~~vl~ 72 (269)
-.|++||-.|+|.| +..+.+ ... |+ +|+++|.+++-++
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~ 210 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVE 210 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHH
Confidence 47889999999743 333333 345 88 8999999887653
No 352
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=48.25 E-value=17 Score=32.52 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=27.1
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
.-.|.+||=+|||. |+..+.+| ..|+.+|+++|.+++-+
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~ 231 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKY 231 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 34688999999853 44443333 36887899999988655
No 353
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=48.08 E-value=15 Score=32.02 Aligned_cols=47 Identities=17% Similarity=0.257 Sum_probs=35.0
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
.|+++|..... ...+.+|.=||.|.+++.+ . ++++++.|+|++++..
T Consensus 16 ~l~~~i~~~~p------~~~~yvEpF~Ggg~V~~~~--~-~~~~i~ND~n~~lin~ 62 (278)
T 2g1p_A 16 PLLDDIKRHLP------KGECLVEPFVGAGSVFLNT--D-FSRYILADINSDLISL 62 (278)
T ss_dssp GGHHHHHHHCC------CCSEEEETTCTTCHHHHTC--C-CSEEEEEESCHHHHHH
T ss_pred HHHHHHHHhcc------ccCeEEeeccCccHHHHhh--c-ccceEEEeccHHHHHH
Confidence 35667766641 2569999999999776643 2 4689999999998853
No 354
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=47.51 E-value=12 Score=29.90 Aligned_cols=38 Identities=26% Similarity=0.180 Sum_probs=25.9
Q ss_pred CCCCCEEEEEcCCC--CHHHHH-HHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY--GLPGIF-ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt--Gl~gl~-aa~~ga~~Vv~tD~~~~vl 71 (269)
.-.|++||-.|++. |...+. +...|+ +|+++|.+++.+
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~ 76 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKR 76 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHH
Confidence 34789999999643 433322 334687 899999988654
No 355
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=46.27 E-value=32 Score=30.24 Aligned_cols=37 Identities=14% Similarity=-0.110 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCC-CHHHHHHH-Hc--CCCeEEEEeCCHHHHH
Q 024311 35 RGKRVLELSCGY-GLPGIFAC-LK--GAGTVHFQDLSAETIR 72 (269)
Q Consensus 35 ~~~~VLELGcGt-Gl~gl~aa-~~--ga~~Vv~tD~~~~vl~ 72 (269)
.|.+||=+|+|. |+..+.+| .. |+ +|+++|.+++-++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~ 210 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRD 210 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHH
Confidence 789999999852 33333333 35 77 7999999887553
No 356
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=45.99 E-value=22 Score=31.23 Aligned_cols=37 Identities=30% Similarity=0.419 Sum_probs=26.0
Q ss_pred CCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 35 RGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
.|.+||=+|+|. |+..+.+| ..|+.+|+++|.+++-+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~ 202 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRL 202 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 889999999842 33333333 36776899999987654
No 357
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=45.12 E-value=26 Score=31.14 Aligned_cols=39 Identities=23% Similarity=0.343 Sum_probs=26.5
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
...|.+||=+|+|. |+..+.+| ..|+.+|+++|.+++-+
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~ 228 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKF 228 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 34688999999753 33333333 36877899999988655
No 358
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=45.03 E-value=30 Score=30.24 Aligned_cols=38 Identities=13% Similarity=0.006 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCCC-HHH-HHHHHcCCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCGYG-LPG-IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcGtG-l~g-l~aa~~ga~~Vv~tD~~~~vl 71 (269)
..|.+||=+|+|.+ +.. ..|+..++.+|+++|.+++-+
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~ 201 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKL 201 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHH
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHh
Confidence 46889999999863 333 234446666999999988644
No 359
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=44.71 E-value=22 Score=31.09 Aligned_cols=38 Identities=32% Similarity=0.124 Sum_probs=26.9
Q ss_pred CCCCCEEEEEcCC--CCHHHHH-HHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCG--YGLPGIF-ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcG--tGl~gl~-aa~~ga~~Vv~tD~~~~vl 71 (269)
...|++||-.||+ .|+..+. +...|+ +|+++|.+++-+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~ 183 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKI 183 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 3478999999983 3444433 334687 899999988755
No 360
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=44.70 E-value=27 Score=31.11 Aligned_cols=39 Identities=23% Similarity=0.379 Sum_probs=26.6
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
...|.+||=+|||. |+..+.+| ..|+++|+++|.+++-+
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~ 229 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF 229 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 34688999999753 33333333 36777899999987654
No 361
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=44.26 E-value=27 Score=32.72 Aligned_cols=50 Identities=22% Similarity=0.335 Sum_probs=31.0
Q ss_pred HHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHH--HHHH--HcC--CCeEEEEeCCHHHH
Q 024311 18 DLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPG--IFAC--LKG--AGTVHFQDLSAETI 71 (269)
Q Consensus 18 ~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~g--l~aa--~~g--a~~Vv~tD~~~~vl 71 (269)
.|+.|+...-... ...+|+|+|+|.|.+. ++-+ ..+ ..++++.+.++.+.
T Consensus 124 ~la~~~~~~~~~~----g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr 179 (432)
T 4f3n_A 124 TLARPVAQALDAS----GTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELR 179 (432)
T ss_dssp HHHHHHHHHHHHH----TCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSH
T ss_pred HHHHHHHHHHHhc----CCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHH
Confidence 4566665543211 1369999999999655 3322 222 34799999998643
No 362
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=43.94 E-value=23 Score=31.08 Aligned_cols=39 Identities=23% Similarity=0.216 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCC-CHHHHHHHH-cCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFACL-KGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa~-~ga~~Vv~tD~~~~vl~ 72 (269)
-.|.+||=+|||. |+..+.+|+ .|+.+|+++|.+++-++
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~ 210 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLA 210 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 4688999999853 444444443 45569999999987553
No 363
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=43.78 E-value=1e+02 Score=25.58 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=29.5
Q ss_pred CCCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
..++|++||=-|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~ 49 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGA 49 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 46789999999988775332 2445688 799999988765
No 364
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=42.68 E-value=29 Score=30.56 Aligned_cols=38 Identities=29% Similarity=0.344 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl~ 72 (269)
..|.+||=.|||. |+..+.+| ..|+ +|+++|.+++-++
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~ 206 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLE 206 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHH
Confidence 3688999999753 33333333 3677 5999999887553
No 365
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=42.53 E-value=36 Score=30.48 Aligned_cols=39 Identities=31% Similarity=0.390 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl~ 72 (269)
..|.+||=+|||. |+..+.+| ..|+.+|+++|.+++-++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 234 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLK 234 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHH
Confidence 4688999999652 44443333 357569999999887553
No 366
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=42.50 E-value=29 Score=30.83 Aligned_cols=30 Identities=20% Similarity=0.300 Sum_probs=23.1
Q ss_pred CCEEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCH
Q 024311 36 GKRVLELSCGYGLPGIFAC----LKGAGTVHFQDLSA 68 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~ 68 (269)
|.+||=.|+ |-.|++++ ..|+ +|+++|.++
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~~Ga-~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRTYGL-EVWMANRRE 214 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHHHTC-EEEEEESSC
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCC-EEEEEeCCc
Confidence 899999998 44554433 3688 899999987
No 367
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=42.40 E-value=25 Score=31.20 Aligned_cols=37 Identities=24% Similarity=0.159 Sum_probs=25.5
Q ss_pred CCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
-.|.+||-+|+|. |+..+.+| ..|+ +|+++|.+++-+
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~ 216 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKR 216 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH
Confidence 4688999999842 33333333 3688 799999877654
No 368
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=41.54 E-value=37 Score=29.63 Aligned_cols=39 Identities=33% Similarity=0.434 Sum_probs=27.2
Q ss_pred CCCCCEEEEEcCCC-CHHHHH-HHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIF-ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~-aa~~ga~~Vv~tD~~~~vl 71 (269)
...|.+||=.|||. |+..+. |...|+..++.+|.+++-+
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~ 198 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKL 198 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHH
Confidence 34788999999864 333332 3347887889999988654
No 369
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=40.87 E-value=25 Score=31.48 Aligned_cols=38 Identities=29% Similarity=0.157 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl~ 72 (269)
-.|.+||-+|+|. |+..+.+| ..|+ +|+++|.+++-++
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~ 232 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKRE 232 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 3688999999863 44443333 3677 6999999886553
No 370
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=40.39 E-value=83 Score=26.08 Aligned_cols=38 Identities=18% Similarity=0.108 Sum_probs=27.9
Q ss_pred CCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=-|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~ 44 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKL 44 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGG
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 4578999999998775331 2345687 899999988655
No 371
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=39.92 E-value=48 Score=29.62 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCCCCHHHHH----HHHcCCCeEEEEeCCHHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIF----ACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~----aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
+++++|+=+|+| -.|.. +...|+ +|+++|.+++-++.
T Consensus 165 l~~~~VlViGaG--gvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~ 205 (361)
T 1pjc_A 165 VKPGKVVILGGG--VVGTEAAKMAVGLGA-QVQIFDINVERLSY 205 (361)
T ss_dssp BCCCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred CCCCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEeCCHHHHHH
Confidence 567999999995 44543 334788 89999999876643
No 372
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=39.60 E-value=51 Score=23.19 Aligned_cols=35 Identities=11% Similarity=0.091 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFAC----LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~~vl 71 (269)
.+++|+=+|+ |..|..++ ..|..+|++.|.+++-+
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~ 42 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAAL 42 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHH
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHH
Confidence 4578999998 66664433 35645899999998755
No 373
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=39.52 E-value=34 Score=29.97 Aligned_cols=38 Identities=29% Similarity=0.338 Sum_probs=28.1
Q ss_pred CCCCEEEEEcC--CCCHHHHHHH-HcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSC--GYGLPGIFAC-LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGc--GtGl~gl~aa-~~ga~~Vv~tD~~~~vl~ 72 (269)
..|.+||-.|+ |.|+..+.++ ..|+ +|+++|.+++-++
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~ 205 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLR 205 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 46889999998 4565554444 4677 8999999887653
No 374
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=39.44 E-value=49 Score=29.84 Aligned_cols=37 Identities=27% Similarity=0.381 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCHHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIFAC----LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~~vl~ 72 (269)
.+++++|+=+|+ |..|..++ ..|+ +|++.|.+++-++
T Consensus 165 ~l~g~~V~ViG~--G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~ 205 (377)
T 2vhw_A 165 GVEPADVVVIGA--GTAGYNAARIANGMGA-TVTVLDINIDKLR 205 (377)
T ss_dssp TBCCCEEEEECC--SHHHHHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred CCCCCEEEEECC--CHHHHHHHHHHHhCCC-EEEEEeCCHHHHH
Confidence 368999999998 55564433 4688 8999999987664
No 375
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=39.26 E-value=23 Score=31.15 Aligned_cols=38 Identities=16% Similarity=-0.014 Sum_probs=26.8
Q ss_pred CCCCCEEEEEcCC--CCHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCG--YGLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcG--tGl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
...|++||-.|++ .|+..+.++ ..|+ +|+++|.+++-+
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~ 207 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKE 207 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHH
Confidence 3478999999983 454443333 4687 899999987654
No 376
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=39.11 E-value=50 Score=29.56 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCHHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIFAC----LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~~vl~ 72 (269)
.+++++|+=+|+ |-.|..++ ..|+ +|++.|.+++-++
T Consensus 163 ~l~~~~V~ViGa--G~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~ 203 (369)
T 2eez_A 163 GVAPASVVILGG--GTVGTNAAKIALGMGA-QVTILDVNHKRLQ 203 (369)
T ss_dssp BBCCCEEEEECC--SHHHHHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred CCCCCEEEEECC--CHHHHHHHHHHHhCCC-EEEEEECCHHHHH
Confidence 368899999998 55665433 4688 8999999987653
No 377
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=39.00 E-value=46 Score=29.44 Aligned_cols=35 Identities=29% Similarity=0.307 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCCHHHHHHH----Hc-CCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFAC----LK-GAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa----~~-ga~~Vv~tD~~~~vl 71 (269)
..|.+||=+|+| -.|+++. .. |+ +|+++|.+++-+
T Consensus 185 ~~g~~VlV~GaG--~vG~~avqlak~~~Ga-~Vi~~~~~~~~~ 224 (359)
T 1h2b_A 185 YPGAYVAIVGVG--GLGHIAVQLLKVMTPA-TVIALDVKEEKL 224 (359)
T ss_dssp CTTCEEEEECCS--HHHHHHHHHHHHHCCC-EEEEEESSHHHH
T ss_pred CCCCEEEEECCC--HHHHHHHHHHHHcCCC-eEEEEeCCHHHH
Confidence 368899999985 4554433 35 87 899999988655
No 378
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=38.65 E-value=1.4e+02 Score=25.44 Aligned_cols=38 Identities=16% Similarity=0.260 Sum_probs=28.6
Q ss_pred CCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
.++|++||=.|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~ 68 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPAL 68 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 3689999999998774331 2345687 899999998766
No 379
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=38.61 E-value=1.1e+02 Score=25.44 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=28.7
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~ 57 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSEL 57 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 468999999998877533 22445687 899999998766
No 380
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=38.54 E-value=1.3e+02 Score=24.96 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=27.8
Q ss_pred CCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=.|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~ 66 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKL 66 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 4689999999987664332 1344687 799999998765
No 381
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=38.43 E-value=39 Score=29.95 Aligned_cols=38 Identities=29% Similarity=0.290 Sum_probs=26.7
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
.-.|.+||=+|||. |+..+.+| ..|+ +|+++|.+++-+
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~ 226 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKL 226 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhH
Confidence 34788999999663 44443333 3687 899999988655
No 382
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=38.35 E-value=43 Score=29.33 Aligned_cols=38 Identities=21% Similarity=0.186 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl~ 72 (269)
..|.+||=.|+|. |+..+.++ ..|+ +|+++|.+++-++
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~ 202 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLE 202 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 4688999999953 43333333 3687 8999999887653
No 383
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=37.93 E-value=79 Score=28.00 Aligned_cols=35 Identities=23% Similarity=0.322 Sum_probs=26.5
Q ss_pred CCCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCC
Q 024311 32 LSFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLS 67 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~ 67 (269)
..+++++||=+|+| |... + .++..|+++|++.+.+
T Consensus 150 ~~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 150 HDIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp CCCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEECC
Confidence 46789999999997 4322 2 2445788899999998
No 384
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=37.68 E-value=27 Score=30.50 Aligned_cols=38 Identities=24% Similarity=0.095 Sum_probs=27.4
Q ss_pred CCCCCEEEEEcCC--CCHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCG--YGLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcG--tGl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
...|++||=.||+ .|+..+.++ ..|+ +|+++|.+++-+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~ 187 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKC 187 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 3478999999983 455544333 4688 999999988655
No 385
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=37.61 E-value=25 Score=31.00 Aligned_cols=38 Identities=18% Similarity=0.103 Sum_probs=26.3
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
...|.+||=.|||. |+..+.+| ..|+ +|+++|.+++-+
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~ 213 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKK 213 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHH
Confidence 34788999999853 44443333 3687 899999987654
No 386
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=37.06 E-value=28 Score=30.48 Aligned_cols=37 Identities=19% Similarity=0.035 Sum_probs=26.6
Q ss_pred CCCCEEEEEcC--CCCHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSC--GYGLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGc--GtGl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
..|++||-.|| |.|+..+.++ ..|+ +|+++|.+++-+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~ 193 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKV 193 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 47889999998 3454443333 4687 899999988655
No 387
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=36.97 E-value=62 Score=28.08 Aligned_cols=38 Identities=16% Similarity=0.328 Sum_probs=28.0
Q ss_pred CCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=+||| |... + .++..|+++|++.+.+++-.
T Consensus 124 ~l~~k~vlVlGaG-G~g~aia~~L~~~G~~~v~i~~R~~~~a 164 (283)
T 3jyo_A 124 NAKLDSVVQVGAG-GVGNAVAYALVTHGVQKLQVADLDTSRA 164 (283)
T ss_dssp TCCCSEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSSHHHH
T ss_pred CcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEECCHHHH
Confidence 5689999999997 4322 2 23457888899999988654
No 388
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=36.93 E-value=42 Score=28.17 Aligned_cols=38 Identities=11% Similarity=0.074 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCC--CH---HHHHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY--GL---PGIFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt--Gl---~gl~aa~~ga~~Vv~tD~~~~vl 71 (269)
.++||++|=-|++. |+ ....++..|+ +|+++|.+++.+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~ 45 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSR 45 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 57899999999643 53 2233556898 899999987655
No 389
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=36.61 E-value=1.5e+02 Score=24.85 Aligned_cols=39 Identities=23% Similarity=0.299 Sum_probs=28.5
Q ss_pred CCCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~ 48 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKL 48 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 3568999999998776433 12445687 899999998765
No 390
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=36.20 E-value=95 Score=26.12 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=28.6
Q ss_pred CCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
.++|++||=-|++.|+-. + .++..|+ +|+++|.+++-+
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~ 63 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRV 63 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 578999999998776533 2 2445787 899999998765
No 391
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=35.66 E-value=65 Score=26.69 Aligned_cols=41 Identities=27% Similarity=0.319 Sum_probs=27.8
Q ss_pred CCCCCCCCEEEEEcCCCCHHHHH---HHHcCCCeEEEEeCCHHHH
Q 024311 30 GQLSFRGKRVLELSCGYGLPGIF---ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 30 ~~~~~~~~~VLELGcGtGl~gl~---aa~~ga~~Vv~tD~~~~vl 71 (269)
....+++++||=.|++.|+-.-+ ++..|+ +|+++|.+++.+
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~ 56 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL 56 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH
Confidence 34678999999999876643322 344677 899999987443
No 392
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=35.33 E-value=81 Score=26.30 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=29.5
Q ss_pred CCCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=-|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~ 45 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERL 45 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 45789999999998775332 2445687 799999998765
No 393
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=35.24 E-value=75 Score=26.42 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=28.5
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~ 45 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNI 45 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 468999999998877533 22445787 899999998765
No 394
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=35.05 E-value=31 Score=29.86 Aligned_cols=37 Identities=14% Similarity=0.012 Sum_probs=25.3
Q ss_pred CCCCCEEEEEcCCC-CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY-GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
.-.|.+||=+|||. |+..+.+| ..|+ +|+++| +++-+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~ 178 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQ 178 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhH
Confidence 34789999999942 44443333 3688 999999 77544
No 395
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=34.59 E-value=61 Score=24.02 Aligned_cols=34 Identities=21% Similarity=0.154 Sum_probs=23.8
Q ss_pred CCCEEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFAC----LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~~vl 71 (269)
+.++|+=+||| ..|..++ ..|. +|++.|.+++.+
T Consensus 5 ~~~~v~I~G~G--~iG~~la~~L~~~g~-~V~~id~~~~~~ 42 (141)
T 3llv_A 5 GRYEYIVIGSE--AAGVGLVRELTAAGK-KVLAVDKSKEKI 42 (141)
T ss_dssp -CCSEEEECCS--HHHHHHHHHHHHTTC-CEEEEESCHHHH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHHCCC-eEEEEECCHHHH
Confidence 35678889885 4564433 3566 899999998765
No 396
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=34.33 E-value=94 Score=29.48 Aligned_cols=37 Identities=19% Similarity=0.163 Sum_probs=28.0
Q ss_pred CCCCCCEEEEEcCCCCHHHHH----HHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGIF----ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl~----aa~~ga~~Vv~tD~~~~vl 71 (269)
..+.|++|+=.|+| | .|.. ++..|+ +|+++|.++.-.
T Consensus 261 ~~L~GKtVvVtGaG-g-IG~aiA~~Laa~GA-~Viv~D~~~~~a 301 (488)
T 3ond_A 261 VMIAGKVAVVAGYG-D-VGKGCAAALKQAGA-RVIVTEIDPICA 301 (488)
T ss_dssp CCCTTCEEEEECCS-H-HHHHHHHHHHHTTC-EEEEECSCHHHH
T ss_pred CcccCCEEEEECCC-H-HHHHHHHHHHHCCC-EEEEEcCCHHHH
Confidence 46799999999998 4 4433 334788 899999988644
No 397
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=34.31 E-value=1.3e+02 Score=24.90 Aligned_cols=39 Identities=21% Similarity=0.266 Sum_probs=28.9
Q ss_pred CCCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
..++|++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~ 47 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADI 47 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 3568999999998776533 12445687 899999998765
No 398
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=34.13 E-value=77 Score=26.15 Aligned_cols=38 Identities=29% Similarity=0.336 Sum_probs=28.4
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~ 43 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGA 43 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 468999999998877533 22445787 899999998765
No 399
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=34.12 E-value=43 Score=29.58 Aligned_cols=33 Identities=18% Similarity=0.100 Sum_probs=23.3
Q ss_pred CEEEEEcCCC-CHHH-HHHH--HcCCCeEEEEeCCHH
Q 024311 37 KRVLELSCGY-GLPG-IFAC--LKGAGTVHFQDLSAE 69 (269)
Q Consensus 37 ~~VLELGcGt-Gl~g-l~aa--~~ga~~Vv~tD~~~~ 69 (269)
.+||=+|+|. |+.. +.+| ..|+++|+++|.+++
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~ 210 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDR 210 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcc
Confidence 8999999843 4444 4334 467756999999775
No 400
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=34.03 E-value=66 Score=29.15 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=27.4
Q ss_pred CCCCCEEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIFAC----LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~~vl 71 (269)
.++|++|+=.|+|. .|..++ ..|+ +|+++|.+++-+
T Consensus 170 ~L~GktV~V~G~G~--VG~~~A~~L~~~Ga-kVvv~D~~~~~l 209 (364)
T 1leh_A 170 SLEGLAVSVQGLGN--VAKALCKKLNTEGA-KLVVTDVNKAAV 209 (364)
T ss_dssp CCTTCEEEEECCSH--HHHHHHHHHHHTTC-EEEEECSCHHHH
T ss_pred CCCcCEEEEECchH--HHHHHHHHHHHCCC-EEEEEcCCHHHH
Confidence 57999999998854 554433 4788 799999988655
No 401
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=33.74 E-value=69 Score=26.20 Aligned_cols=40 Identities=18% Similarity=0.255 Sum_probs=29.9
Q ss_pred CCCCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 31 QLSFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 31 ~~~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
....++++||=.|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~ 51 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKL 51 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHH
Confidence 457799999999988775331 2345687 899999988765
No 402
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=33.67 E-value=1.7e+02 Score=24.38 Aligned_cols=38 Identities=18% Similarity=0.153 Sum_probs=28.2
Q ss_pred CCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
.++|++||=-|++.|+-. + .++..|+ +|+++|.+.+-+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~ 64 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRV 64 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 578999999998876533 1 2344677 899999987655
No 403
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=33.41 E-value=98 Score=25.54 Aligned_cols=39 Identities=18% Similarity=0.132 Sum_probs=29.2
Q ss_pred CCCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=-|++.|+-. + .++..|+ +|+++|.+++-+
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~ 49 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKL 49 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 4578999999998876433 1 2345688 899999998766
No 404
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=33.40 E-value=1.6e+02 Score=24.72 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
+.+++||=-|++.|+-. + .++..|+ +|+++|.+++-+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~ 41 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARI 41 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 35789999998877533 2 2345787 899999998765
No 405
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=33.16 E-value=1.7e+02 Score=23.64 Aligned_cols=37 Identities=24% Similarity=0.096 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
+++++||=.|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~ 42 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASA 42 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 57889999998766433 12345687 899999988765
No 406
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=33.08 E-value=1.1e+02 Score=25.78 Aligned_cols=38 Identities=21% Similarity=0.305 Sum_probs=28.4
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~ 69 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDAL 69 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGG
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 578999999998876533 22445687 899999987655
No 407
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=32.76 E-value=26 Score=31.32 Aligned_cols=56 Identities=14% Similarity=0.075 Sum_probs=34.8
Q ss_pred CCccEEEEeccccccCC----H-HHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEE
Q 024311 187 GGYDVILLTEIPYSVTS----L-KKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHL 254 (269)
Q Consensus 187 ~~fDlIlasD~iY~~~~----~-~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~ 254 (269)
.+||+|.- |- |.|.- + +.+++.|.++++ |+|++. .+. ..-...+.|++.||-..++
T Consensus 185 ~~~Da~fl-Dg-FsP~kNPeLWs~e~f~~l~~~~~-pgg~la-TYt--------aag~VRR~L~~aGF~V~k~ 245 (308)
T 3vyw_A 185 FKADAVFH-DA-FSPYKNPELWTLDFLSLIKERID-EKGYWV-SYS--------SSLSVRKSLLTLGFKVGSS 245 (308)
T ss_dssp CCEEEEEE-CC-SCTTTSGGGGSHHHHHHHHTTEE-EEEEEE-ESC--------CCHHHHHHHHHTTCEEEEE
T ss_pred cceeEEEe-CC-CCcccCcccCCHHHHHHHHHHhC-CCcEEE-EEe--------CcHHHHHHHHHCCCEEEec
Confidence 46888886 54 33432 2 258999999998 777643 221 1224566799999854433
No 408
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=32.67 E-value=82 Score=27.15 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=28.1
Q ss_pred CCCCCCEEEEEcCCCCHHH-HH--HHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG-IF--ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g-l~--aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=+|+| |... ++ ++..|+.+|++.+.+++-.
T Consensus 116 ~~l~~k~~lvlGaG-g~~~aia~~L~~~G~~~v~i~~R~~~~a 157 (272)
T 3pwz_A 116 EPLRNRRVLLLGAG-GAVRGALLPFLQAGPSELVIANRDMAKA 157 (272)
T ss_dssp CCCTTSEEEEECCS-HHHHHHHHHHHHTCCSEEEEECSCHHHH
T ss_pred CCccCCEEEEECcc-HHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 45789999999997 4322 22 3457877999999987644
No 409
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=32.51 E-value=23 Score=30.10 Aligned_cols=36 Identities=22% Similarity=0.445 Sum_probs=25.7
Q ss_pred CCCCCEEEEEcCCC-CHH-HHHHHHcCCCeEEEEeCCH
Q 024311 33 SFRGKRVLELSCGY-GLP-GIFACLKGAGTVHFQDLSA 68 (269)
Q Consensus 33 ~~~~~~VLELGcGt-Gl~-gl~aa~~ga~~Vv~tD~~~ 68 (269)
.+++++||=+|||. |.. ...+++.|..++++.|.+.
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 45778999999982 211 1235567888999999875
No 410
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=32.07 E-value=2e+02 Score=23.16 Aligned_cols=38 Identities=29% Similarity=0.399 Sum_probs=26.8
Q ss_pred CCCCCCEEEEEcCCCCHHHHHH----HHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGIFA----CLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl~a----a~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=.|++.| .|..+ +..|+ +|+++|.+++-+
T Consensus 7 ~~~~~~~vlVtGasgg-iG~~la~~l~~~G~-~V~~~~r~~~~~ 48 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAG-IGKEIAITFATAGA-SVVVSDINADAA 48 (255)
T ss_dssp GCCTTCEEEETTTTSH-HHHHHHHHHHTTTC-EEEEEESCHHHH
T ss_pred CCCCCCEEEEECCccH-HHHHHHHHHHHCCC-EEEEEcCCHHHH
Confidence 3468899999997644 45333 33576 899999988655
No 411
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=31.95 E-value=2.2e+02 Score=23.57 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=26.0
Q ss_pred CCCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCC
Q 024311 32 LSFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLS 67 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~ 67 (269)
..++|++||=-|++.|+-. ..++..|+ +|+++|.+
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 46 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLC 46 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecc
Confidence 4678999999998776533 22445787 89999987
No 412
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=31.83 E-value=2.1e+02 Score=23.41 Aligned_cols=39 Identities=15% Similarity=0.042 Sum_probs=28.1
Q ss_pred CCCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=-|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~ 46 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKEL 46 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 34689999999987664332 2344687 899999988755
No 413
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=31.24 E-value=2.2e+02 Score=24.06 Aligned_cols=34 Identities=21% Similarity=0.207 Sum_probs=26.0
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCC
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLS 67 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~ 67 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.+
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~ 61 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVC 61 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence 578999999999887533 22445787 89999987
No 414
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=31.07 E-value=2.3e+02 Score=23.46 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=25.7
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCC
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLS 67 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~ 67 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.+
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~ 43 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDIC 43 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEccc
Confidence 568999999999877533 22445687 89999987
No 415
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=31.01 E-value=2e+02 Score=23.01 Aligned_cols=35 Identities=14% Similarity=0.156 Sum_probs=25.4
Q ss_pred CCCEEEEEcCCCCHHHHH----HHHcCCCeEEEEeCCHHHH
Q 024311 35 RGKRVLELSCGYGLPGIF----ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~----aa~~ga~~Vv~tD~~~~vl 71 (269)
++++||=-|++.|+ |.. ++..|+ +|++++.+++-+
T Consensus 1 ~~k~vlITGas~gI-G~~ia~~l~~~G~-~V~~~~r~~~~~ 39 (235)
T 3l77_A 1 EMKVAVITGASRGI-GEAIARALARDGY-ALALGARSVDRL 39 (235)
T ss_dssp CCCEEEEESCSSHH-HHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCEEEEECCCcHH-HHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 36789999987664 433 344687 799999998766
No 416
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=30.99 E-value=48 Score=29.17 Aligned_cols=38 Identities=16% Similarity=-0.012 Sum_probs=26.3
Q ss_pred CCC--CEEEEEcCC--CCHHHHHH-HHcCCCeEEEEeCCHHHH
Q 024311 34 FRG--KRVLELSCG--YGLPGIFA-CLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~--~~VLELGcG--tGl~gl~a-a~~ga~~Vv~tD~~~~vl 71 (269)
..| ++||=.||+ .|+..+.+ ...|+++|+++|.+++-+
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~ 199 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKC 199 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHH
Confidence 367 899999983 34444333 346776899999987655
No 417
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=30.97 E-value=50 Score=28.23 Aligned_cols=37 Identities=24% Similarity=0.284 Sum_probs=28.8
Q ss_pred CCCCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCH
Q 024311 31 QLSFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSA 68 (269)
Q Consensus 31 ~~~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~ 68 (269)
.+.++||.+|==|++.|+=- ..++..|+ +|+++|.+.
T Consensus 4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~ 43 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRA 43 (247)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCc
Confidence 35789999999999988532 33556788 899999974
No 418
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=30.89 E-value=52 Score=28.57 Aligned_cols=39 Identities=28% Similarity=0.107 Sum_probs=27.6
Q ss_pred CCCCCEEEEEcC--CCCHHHHH-HHHcCCCeEEEEeCCHHHHH
Q 024311 33 SFRGKRVLELSC--GYGLPGIF-ACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 33 ~~~~~~VLELGc--GtGl~gl~-aa~~ga~~Vv~tD~~~~vl~ 72 (269)
...|++||-.|+ |.|+..+. +...|+ +|+++|.+++-++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~ 184 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAE 184 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 347889999996 34555433 334687 8999999986553
No 419
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=30.86 E-value=2.2e+02 Score=23.70 Aligned_cols=38 Identities=13% Similarity=0.001 Sum_probs=27.6
Q ss_pred CCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=.|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~ 59 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGL 59 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 3678999999987664332 2344677 899999998655
No 420
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=30.83 E-value=70 Score=24.32 Aligned_cols=36 Identities=19% Similarity=0.316 Sum_probs=24.7
Q ss_pred CCCCCEEEEEcCCCCHHHHHH----HHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIFA----CLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~a----a~~ga~~Vv~tD~~~~vl 71 (269)
...+++|+=+|| |..|..+ ...|. +|++.|.+++.+
T Consensus 16 ~~~~~~v~IiG~--G~iG~~la~~L~~~g~-~V~vid~~~~~~ 55 (155)
T 2g1u_A 16 KQKSKYIVIFGC--GRLGSLIANLASSSGH-SVVVVDKNEYAF 55 (155)
T ss_dssp -CCCCEEEEECC--SHHHHHHHHHHHHTTC-EEEEEESCGGGG
T ss_pred ccCCCcEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHH
Confidence 457789999987 5555432 23566 899999987643
No 421
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=30.65 E-value=1e+02 Score=26.02 Aligned_cols=39 Identities=15% Similarity=0.270 Sum_probs=29.2
Q ss_pred CCCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=-|++.|+-. + .++..|+ +|+++|.+++-+
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~ 64 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAA 64 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 4578999999998877533 2 2345687 899999988755
No 422
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=30.47 E-value=50 Score=29.17 Aligned_cols=37 Identities=19% Similarity=0.073 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCC--CCHHHHHH-HHcCCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCG--YGLPGIFA-CLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcG--tGl~gl~a-a~~ga~~Vv~tD~~~~vl 71 (269)
..|++||-.|++ .|+..+.+ ...|+ +|+++|.+++-+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~ 208 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQ 208 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHH
Confidence 468899999973 34444333 34687 899999988755
No 423
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=30.46 E-value=1.5e+02 Score=24.68 Aligned_cols=38 Identities=11% Similarity=-0.039 Sum_probs=26.0
Q ss_pred CCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
..++++||=-|++.|+-. + .++..|+ +|++++.+++-+
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~ 49 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKG 49 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 457899999998866433 1 2345687 899999998755
No 424
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=30.43 E-value=1.7e+02 Score=24.45 Aligned_cols=38 Identities=11% Similarity=0.079 Sum_probs=28.5
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~ 65 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGA 65 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 468999999998776533 22445788 899999988765
No 425
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=30.32 E-value=28 Score=29.92 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=26.9
Q ss_pred CCCCCEEEEEcC--CCCHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSC--GYGLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGc--GtGl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
...|.+||-.|+ |.|+..+.++ ..|+ +|+++|.+++-+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~ 163 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKL 163 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 346889999998 3455554433 4677 899999987644
No 426
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=30.22 E-value=2.1e+02 Score=23.45 Aligned_cols=36 Identities=25% Similarity=0.376 Sum_probs=26.6
Q ss_pred CCCCEEEEEcCCCCHHHHH----HHHcCCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIF----ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~----aa~~ga~~Vv~tD~~~~vl 71 (269)
+++++||=-|++.|+ |.. ++..|+ +|+++|.+++-+
T Consensus 3 l~~k~vlVTGas~gI-G~~ia~~l~~~G~-~V~~~~r~~~~~ 42 (260)
T 2qq5_A 3 MNGQVCVVTGASRGI-GRGIALQLCKAGA-TVYITGRHLDTL 42 (260)
T ss_dssp TTTCEEEESSTTSHH-HHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCEEEEeCCCchH-HHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 468899999977664 433 345687 899999988655
No 427
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=30.20 E-value=2.2e+02 Score=23.38 Aligned_cols=38 Identities=21% Similarity=0.315 Sum_probs=27.6
Q ss_pred CCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=.|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~ 44 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREAL 44 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 3578999999987764332 2344677 899999988655
No 428
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=29.94 E-value=98 Score=25.13 Aligned_cols=39 Identities=15% Similarity=0.254 Sum_probs=28.9
Q ss_pred CCCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=.|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~ 51 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASL 51 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHH
Confidence 45789999999987664331 2345687 899999998766
No 429
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=29.87 E-value=56 Score=29.87 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=26.6
Q ss_pred CCCCEEEEEcCCCCHHHHHH----HHcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFA----CLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~a----a~~ga~~Vv~tD~~~~vl~ 72 (269)
+.+++|+=+|+|. .|+.+ ..+|+ +|++.|.+++.++
T Consensus 170 l~g~~V~ViGaG~--iG~~aa~~a~~~Ga-~V~v~D~~~~~~~ 209 (401)
T 1x13_A 170 VPPAKVMVIGAGV--AGLAAIGAANSLGA-IVRAFDTRPEVKE 209 (401)
T ss_dssp ECCCEEEEECCSH--HHHHHHHHHHHTTC-EEEEECSCGGGHH
T ss_pred cCCCEEEEECCCH--HHHHHHHHHHHCCC-EEEEEcCCHHHHH
Confidence 5789999999864 44433 24788 8999999887653
No 430
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=29.67 E-value=1.2e+02 Score=25.59 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=28.0
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~ 70 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGST 70 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH
Confidence 468999999998876533 22445688 899999987654
No 431
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=29.63 E-value=55 Score=24.56 Aligned_cols=32 Identities=13% Similarity=0.134 Sum_probs=22.2
Q ss_pred CEEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCHHHH
Q 024311 37 KRVLELSCGYGLPGIFAC----LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 37 ~~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~~vl 71 (269)
.+|+=+||| ..|..++ ..|. .|++.|.+++.+
T Consensus 8 ~~viIiG~G--~~G~~la~~L~~~g~-~v~vid~~~~~~ 43 (140)
T 3fwz_A 8 NHALLVGYG--RVGSLLGEKLLASDI-PLVVIETSRTRV 43 (140)
T ss_dssp SCEEEECCS--HHHHHHHHHHHHTTC-CEEEEESCHHHH
T ss_pred CCEEEECcC--HHHHHHHHHHHHCCC-CEEEEECCHHHH
Confidence 467777774 4554333 3565 899999999876
No 432
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=29.22 E-value=2.3e+02 Score=23.04 Aligned_cols=38 Identities=21% Similarity=0.282 Sum_probs=27.4
Q ss_pred CCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=.|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~ 44 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKL 44 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 3578999999987664332 2344687 899999998755
No 433
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=29.22 E-value=2.2e+02 Score=24.07 Aligned_cols=38 Identities=32% Similarity=0.499 Sum_probs=27.7
Q ss_pred CCCCCEEEEEcCCCCHHHHH---HHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIF---ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~---aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=.|++.|+-.-+ ++..|+ +|+++|.+++-+
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~ 71 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGA-TIVFNDINQELV 71 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 56899999999876643321 334677 899999988655
No 434
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=29.18 E-value=54 Score=27.97 Aligned_cols=36 Identities=28% Similarity=0.226 Sum_probs=27.2
Q ss_pred CCCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCH
Q 024311 32 LSFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSA 68 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~ 68 (269)
..++||++|=-|++.|+=- ..++..|+ +|+++|.+.
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~ 45 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGA-QVLTTARAR 45 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCc
Confidence 3679999999999888532 23456788 899999853
No 435
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=29.13 E-value=61 Score=29.97 Aligned_cols=38 Identities=24% Similarity=0.337 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCC-CHHHHH-HHHcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGY-GLPGIF-ACLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGt-Gl~gl~-aa~~ga~~Vv~tD~~~~vl~ 72 (269)
+.+.+|+=+|+|. |+.... +..+|+ +|++.|.++..++
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~ 227 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKE 227 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHH
Confidence 5788999999974 333222 234688 8999999987653
No 436
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=29.13 E-value=27 Score=30.61 Aligned_cols=38 Identities=13% Similarity=0.028 Sum_probs=27.4
Q ss_pred CCCCCEEEEEcCCC--CHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGY--GLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGt--Gl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
.-.|.+||=.|||. |+..+.++ ..|+ +|+++|.+++-+
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~ 182 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHT 182 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHH
Confidence 34788999999974 44443333 4688 899999987655
No 437
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=29.09 E-value=94 Score=26.29 Aligned_cols=38 Identities=18% Similarity=0.241 Sum_probs=28.6
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~ 66 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAA 66 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 568999999999887543 22445787 899999988755
No 438
>2l48_A N-acetylmuramoyl-L-alanine amidase; bacillus anthracis gamma- phage endolysin, PLYG, cell WALL B domain, homodimer, ACT-type domain; NMR {Bacillus phage gamma}
Probab=29.00 E-value=76 Score=22.86 Aligned_cols=58 Identities=14% Similarity=0.279 Sum_probs=42.5
Q ss_pred CCccEEEEeccccccCCHHHHHHHHHHh-------cCCCCeEEEEEEcccccccCcchHHHHHHhhhcCce
Q 024311 187 GGYDVILLTEIPYSVTSLKKLYLLIKKC-------LRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIF 250 (269)
Q Consensus 187 ~~fDlIlasD~iY~~~~~~~L~~~l~~~-------L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~ 250 (269)
.++.+|.... +.+...+.++..|..+ ++ |+|.+|+.+.... +..++.|...|+++|++
T Consensus 17 ~k~n~V~TGg--fg~~~v~ev~~am~~~g~~gkii~~-~dGl~y~~T~~~s---~~eLdk~t~wLD~rgWw 81 (85)
T 2l48_A 17 TKQNIIQSGA--FSPYETPDVMGALTSLKMTADFILQ-SDGLTYFISKPTS---DAQLKAMKEYLDRKGWW 81 (85)
T ss_dssp CCCCCEEECC--BCTTTHHHHHHHHHHTTCCEEEEEC-TTSCEEEEECCCC---HHHHHHHHHHHHHTTCC
T ss_pred CCceEEEecc--cCHHHHHHHHHHHHHcCceEEEEEC-CCceEEEEeCCCC---HHHHHHHHHHHhccCce
Confidence 3566666543 4677888888888863 33 7899999887542 45789999999999975
No 439
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=28.96 E-value=84 Score=26.65 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 36 GKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 36 ~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
+|+||==|++.|+=- ..++..|+ +|+++|.+++.+
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~ 39 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRS 39 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 478888899888533 23456788 899999998755
No 440
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=28.72 E-value=68 Score=28.41 Aligned_cols=34 Identities=24% Similarity=0.174 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFAC----LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~~vl 71 (269)
.|.+||=+|+| -.|++++ ..|+ +|+++|.+++-+
T Consensus 187 ~g~~VlV~GaG--~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~ 224 (366)
T 1yqd_A 187 PGKHIGIVGLG--GLGHVAVKFAKAFGS-KVTVISTSPSKK 224 (366)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCGGGH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 68899999974 4554433 3677 899999987644
No 441
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=28.70 E-value=2e+02 Score=24.26 Aligned_cols=37 Identities=24% Similarity=0.342 Sum_probs=26.9
Q ss_pred CCCCCEEEEEcCCC--CHH---HHHHHHcCCCeEEEEeCCHHH
Q 024311 33 SFRGKRVLELSCGY--GLP---GIFACLKGAGTVHFQDLSAET 70 (269)
Q Consensus 33 ~~~~~~VLELGcGt--Gl~---gl~aa~~ga~~Vv~tD~~~~v 70 (269)
.+++++||=.|++. |+- ...++..|+ +|+++|.+++.
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~ 68 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETF 68 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGG
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHH
Confidence 56899999999864 542 223455788 79999998653
No 442
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=28.60 E-value=1.9e+02 Score=24.21 Aligned_cols=39 Identities=13% Similarity=0.024 Sum_probs=25.4
Q ss_pred CCCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
...++++||=-|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~ 61 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNV 61 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 34578999999988775331 2445687 899999998765
No 443
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=28.54 E-value=60 Score=27.13 Aligned_cols=35 Identities=17% Similarity=0.167 Sum_probs=25.9
Q ss_pred CCCCEEEEEcC-CCCHHHHHH----HHcCCCeEEEEeCCHH
Q 024311 34 FRGKRVLELSC-GYGLPGIFA----CLKGAGTVHFQDLSAE 69 (269)
Q Consensus 34 ~~~~~VLELGc-GtGl~gl~a----a~~ga~~Vv~tD~~~~ 69 (269)
+++++||=.|+ |+|-.|..+ +..|+ +|+++|.+++
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~ 44 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRL 44 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCH
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChH
Confidence 57899999998 355556443 34677 8999999764
No 444
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=28.54 E-value=1.1e+02 Score=25.76 Aligned_cols=37 Identities=30% Similarity=0.269 Sum_probs=27.7
Q ss_pred CCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
++|++||=-|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~ 42 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERL 42 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHH
Confidence 578999999988775332 2445687 899999988765
No 445
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=28.52 E-value=1.1e+02 Score=25.18 Aligned_cols=38 Identities=26% Similarity=0.336 Sum_probs=27.7
Q ss_pred CCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=-|++.|+-. + .++..|+ +|+++|.+++-+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~ 45 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERA 45 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 357899999998766433 1 2345687 899999988755
No 446
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=28.27 E-value=1.1e+02 Score=27.17 Aligned_cols=47 Identities=17% Similarity=0.180 Sum_probs=32.4
Q ss_pred CCEEEEEcCCCCHHHHH--HHHcCCCeEEEEeCCHHHHHHhhHHHHHHHHH
Q 024311 36 GKRVLELSCGYGLPGIF--ACLKGAGTVHFQDLSAETIRCTTVPNVLANLE 84 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~--aa~~ga~~Vv~tD~~~~vl~~~~~~Nl~~N~~ 84 (269)
-.+|-=||||+=-.|++ +|..|. .|++.|.+++.++.. ..+++.++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~-~~~i~~~l~ 54 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGA-LENIRKEMK 54 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHH-HHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHH-HHHHHHHHH
Confidence 35788899987334444 455676 899999999988654 355665554
No 447
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=28.13 E-value=54 Score=28.01 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=28.9
Q ss_pred CCCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAET 70 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~v 70 (269)
..++||.+|==|++.|+=- ..++..|+ +|+++|.+++-
T Consensus 3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~ 43 (258)
T 4gkb_A 3 LNLQDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPD 43 (258)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCccc
Confidence 4579999999999998632 33556788 89999997643
No 448
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=28.01 E-value=2.4e+02 Score=22.79 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=26.9
Q ss_pred CCCCCEEEEEcCCCCHHHHH----HHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIF----ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~----aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=.|++.|+ |.. ++..|+ +|+++|.+++-+
T Consensus 10 ~l~~k~vlItGasggi-G~~la~~l~~~G~-~V~~~~r~~~~~ 50 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNI-GLACVTALAEAGA-RVIIADLDEAMA 50 (260)
T ss_dssp CCTTCEEEEETTTSHH-HHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCEEEEeCCCchH-HHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 4678999999977554 433 334677 899999987654
No 449
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=27.99 E-value=1.1e+02 Score=28.53 Aligned_cols=34 Identities=12% Similarity=0.177 Sum_probs=21.8
Q ss_pred CCEEEEEcCCCCHHHHHHHH-c--CCCeEEEEeCCHHHH
Q 024311 36 GKRVLELSCGYGLPGIFACL-K--GAGTVHFQDLSAETI 71 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~aa~-~--ga~~Vv~tD~~~~vl 71 (269)
.++|+=+|| |-.|-.+|+ + ....|++.|.+++.+
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~ 39 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRL 39 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHH
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence 346666555 566654443 2 123799999999877
No 450
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=27.94 E-value=1.2e+02 Score=24.82 Aligned_cols=39 Identities=26% Similarity=0.237 Sum_probs=29.2
Q ss_pred CCCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=.|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~ 46 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGA 46 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHH
Confidence 4568999999999877533 22445687 899999998765
No 451
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=27.92 E-value=2.6e+02 Score=23.11 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=28.0
Q ss_pred CCCCCCEEEEEcCCCCHHHHH----HHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGIF----ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl~----aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=.|++.|+ |.. ++..|+ +|+++|.+++-+
T Consensus 27 ~~l~~k~vlITGasggI-G~~la~~L~~~G~-~V~~~~r~~~~~ 68 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGI-GRLTAYEFAKLKS-KLVLWDINKHGL 68 (272)
T ss_dssp CCCTTCEEEEETTTSHH-HHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred cccCCCEEEEECCCchH-HHHHHHHHHHCCC-EEEEEEcCHHHH
Confidence 45789999999977654 433 334677 899999988655
No 452
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=27.86 E-value=2.5e+02 Score=23.27 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=25.1
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeC
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDL 66 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~ 66 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r 47 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDI 47 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEec
Confidence 578999999999877533 22445787 8999998
No 453
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=27.85 E-value=54 Score=27.63 Aligned_cols=38 Identities=18% Similarity=0.109 Sum_probs=27.1
Q ss_pred CCCCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHH
Q 024311 31 QLSFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAE 69 (269)
Q Consensus 31 ~~~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~ 69 (269)
+..+++|+||=-|++.|+-. + .++..|+ +|+++|.+++
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~ 49 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEK 49 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC-
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCch
Confidence 45789999999998877533 2 2445687 8999998764
No 454
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=27.75 E-value=2.4e+02 Score=23.56 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=27.3
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeC-CHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDL-SAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~-~~~vl 71 (269)
.+.+++||=-|++.|+-. ..++..|+ +|+++|. +++.+
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~ 63 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEI 63 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHH
Confidence 467899999998877533 22445787 8999998 55544
No 455
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=27.39 E-value=76 Score=26.91 Aligned_cols=39 Identities=21% Similarity=0.191 Sum_probs=25.4
Q ss_pred CCCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
..++|++||=-|++.|+-. + .++..|+ +|+++|.+++-+
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~ 70 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVL 70 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 3568999999998876433 1 2345687 899999998766
No 456
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=27.31 E-value=99 Score=25.47 Aligned_cols=38 Identities=21% Similarity=0.184 Sum_probs=28.4
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~ 46 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGA 46 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 468999999998877533 22445787 899999988755
No 457
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=27.21 E-value=88 Score=26.18 Aligned_cols=38 Identities=26% Similarity=0.234 Sum_probs=28.4
Q ss_pred CCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=.|++.|+-. + .++..|+ +|+++|.+++-+
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~ 67 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKG 67 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHH
Confidence 568999999998877433 1 2345687 899999998765
No 458
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=26.97 E-value=1e+02 Score=25.56 Aligned_cols=38 Identities=18% Similarity=0.193 Sum_probs=28.0
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~ 43 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKL 43 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 467899999998776433 12445787 899999998765
No 459
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=26.82 E-value=1.4e+02 Score=25.69 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=28.9
Q ss_pred CCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=-|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~ 45 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSI 45 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 4578999999998876442 2345687 899999998766
No 460
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=26.76 E-value=1.3e+02 Score=25.10 Aligned_cols=40 Identities=20% Similarity=0.116 Sum_probs=28.7
Q ss_pred CCCCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 31 QLSFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 31 ~~~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
...+++++||=.|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~ 58 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEA 58 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 356789999999987664332 2344687 899999988655
No 461
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=26.74 E-value=2.7e+02 Score=23.12 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=26.0
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCC
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLS 67 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~ 67 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~ 44 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC 44 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence 568999999999887533 22445787 89999987
No 462
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=26.62 E-value=47 Score=29.46 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=23.1
Q ss_pred CCCEEEEEcCCCCHHHHH--HHHcCC-CeEEEEeCCH
Q 024311 35 RGKRVLELSCGYGLPGIF--ACLKGA-GTVHFQDLSA 68 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~--aa~~ga-~~Vv~tD~~~ 68 (269)
.||+|+=+|+|.|-...+ +.+.+. .+|++.|-++
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 489999999998744433 233443 3899999764
No 463
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=26.48 E-value=2.9e+02 Score=23.26 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCCCHHHHH---HHHcCC--CeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIF---ACLKGA--GTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~---aa~~ga--~~Vv~tD~~~~vl 71 (269)
+++++||=-|++.|+-.-+ ++..|+ .+|+++|.+++-+
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~ 73 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL 73 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHH
Confidence 5789999999887753322 233454 3899999998766
No 464
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=26.39 E-value=2.8e+02 Score=22.97 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=25.0
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeC
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDL 66 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~ 66 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r 43 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDI 43 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEec
Confidence 468999999998877533 22445788 8999998
No 465
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=26.38 E-value=85 Score=26.62 Aligned_cols=38 Identities=16% Similarity=0.276 Sum_probs=28.4
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~~~~vl 71 (269)
.++|++||=-|++.|+-. ..++..|+ +|+++|.+++-+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~ 45 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNAL 45 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 367899999998877533 22445788 899999998765
No 466
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=26.37 E-value=1.2e+02 Score=26.29 Aligned_cols=39 Identities=10% Similarity=0.278 Sum_probs=27.9
Q ss_pred CCCCCCEEEEEcCCCCHHH-HH--HHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG-IF--ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g-l~--aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=+|+| |... ++ ++..|+.+|++.+.+++-.
T Consensus 122 ~~l~~k~vlvlGaG-g~g~aia~~L~~~G~~~v~v~~R~~~~a 163 (281)
T 3o8q_A 122 VLLKGATILLIGAG-GAARGVLKPLLDQQPASITVTNRTFAKA 163 (281)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHTTCCSEEEEEESSHHHH
T ss_pred CCccCCEEEEECch-HHHHHHHHHHHhcCCCeEEEEECCHHHH
Confidence 45789999999997 4322 22 3346777999999987654
No 467
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=26.33 E-value=2.8e+02 Score=22.96 Aligned_cols=39 Identities=18% Similarity=0.094 Sum_probs=28.3
Q ss_pred CCCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=.|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~ 58 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKEL 58 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 45789999999987664332 2344687 899999998655
No 468
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=26.29 E-value=2.8e+02 Score=23.10 Aligned_cols=38 Identities=11% Similarity=0.037 Sum_probs=27.1
Q ss_pred CCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeC-CHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDL-SAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~-~~~vl 71 (269)
.+++++||=-|++.|+-. ..++..|+ +|+++|. +++-+
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~ 67 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGV 67 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHH
Confidence 467899999998877533 22445787 8999996 66544
No 469
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=26.24 E-value=1.7e+02 Score=20.90 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=22.3
Q ss_pred CCEEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCHHHH
Q 024311 36 GKRVLELSCGYGLPGIFAC----LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~~vl 71 (269)
+++|+=+|+ |..|..++ ..|. +|++.|.+++.+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~-~v~~~d~~~~~~ 40 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGH-DIVLIDIDKDIC 40 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHH
Confidence 467888876 56664433 3465 899999988755
No 470
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=25.93 E-value=1.2e+02 Score=25.01 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=-|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~ 44 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNL 44 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 4578999999998775332 2445688 899999998766
No 471
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=25.89 E-value=79 Score=22.97 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=23.2
Q ss_pred CCCCEEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFAC----LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~~vl 71 (269)
+++++|+=+|+ |..|..++ ..|. +|++.|.+++-+
T Consensus 4 ~~~~~v~I~G~--G~iG~~~a~~l~~~g~-~v~~~d~~~~~~ 42 (144)
T 2hmt_A 4 IKNKQFAVIGL--GRFGGSIVKELHRMGH-EVLAVDINEEKV 42 (144)
T ss_dssp --CCSEEEECC--SHHHHHHHHHHHHTTC-CCEEEESCHHHH
T ss_pred CcCCcEEEECC--CHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 35678999997 56664433 3565 799999987644
No 472
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=25.78 E-value=1e+02 Score=25.67 Aligned_cols=38 Identities=24% Similarity=0.325 Sum_probs=28.2
Q ss_pred CCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=-|++.|+-. + .++..|+ +|+++|.+++-+
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~ 47 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENV 47 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 468999999998766433 1 2345687 899999998765
No 473
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=25.72 E-value=3.4e+02 Score=23.84 Aligned_cols=37 Identities=19% Similarity=0.130 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCHHHHHHHHc-CCCeEEEEeCCHHHHHH
Q 024311 36 GKRVLELSCGYGLPGIFACLK-GAGTVHFQDLSAETIRC 73 (269)
Q Consensus 36 ~~~VLELGcGtGl~gl~aa~~-ga~~Vv~tD~~~~vl~~ 73 (269)
.+.|+.||||..-...-+... +.-+++=.|+ |++++.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~ 135 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVEL 135 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHH
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHH
Confidence 469999999999766554442 3336777787 778743
No 474
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=25.15 E-value=32 Score=29.52 Aligned_cols=45 Identities=22% Similarity=0.270 Sum_probs=33.6
Q ss_pred HHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHHHHHcCCCeEEEEeCCHHHHHH
Q 024311 19 LVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIFACLKGAGTVHFQDLSAETIRC 73 (269)
Q Consensus 19 La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~aa~~ga~~Vv~tD~~~~vl~~ 73 (269)
|+++|..... +..+.+|.=||.|.+.+.. . ++ +++.|+|++++..
T Consensus 14 l~~~i~~~lP------~~~~yvEpF~GggaV~~~~--~-~~-~viNDin~~li~~ 58 (259)
T 1yf3_A 14 LLPELKSHFP------KYNRFVDLFCGGLSVSLNV--N-GP-VLANDIQEPIIEM 58 (259)
T ss_dssp THHHHHHTCC------CCSEEEETTCTTCTTGGGS--C-SS-EEEECSCHHHHHH
T ss_pred HHHHHHHhCc------ccCeEEEecCCccHHHHhc--c-cc-EEEecCChHHHHH
Confidence 5667766531 2569999999999777643 2 35 9999999998854
No 475
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=24.89 E-value=72 Score=29.24 Aligned_cols=36 Identities=25% Similarity=0.250 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCCHHHHHH----HHcCCCeEEEEeCCHHHHH
Q 024311 34 FRGKRVLELSCGYGLPGIFA----CLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~a----a~~ga~~Vv~tD~~~~vl~ 72 (269)
+++.+|+=+|+|. .|+.+ ..+|+ +|++.|.+++.++
T Consensus 182 v~~~kV~ViG~G~--iG~~aa~~a~~lGa-~V~v~D~~~~~l~ 221 (381)
T 3p2y_A 182 VKPASALVLGVGV--AGLQALATAKRLGA-KTTGYDVRPEVAE 221 (381)
T ss_dssp ECCCEEEEESCSH--HHHHHHHHHHHHTC-EEEEECSSGGGHH
T ss_pred cCCCEEEEECchH--HHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 4788999999974 44433 34688 8999999987653
No 476
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=24.87 E-value=64 Score=27.99 Aligned_cols=38 Identities=24% Similarity=0.184 Sum_probs=26.5
Q ss_pred CCCCCEEEEEcCC--CCHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCG--YGLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcG--tGl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
...|.+||=.|++ .|+..+.++ ..|+ +|+++|.+++-+
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~ 186 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKL 186 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 3478899999953 344443333 3677 899999988755
No 477
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=24.62 E-value=72 Score=30.26 Aligned_cols=52 Identities=15% Similarity=0.132 Sum_probs=36.9
Q ss_pred cHHHHHHHHhhhhhcCCCCCCCCEEEEEcCCCCHHHHH--HHHcCC--CeEEEEeCC
Q 024311 15 SSIDLVNVLKHEIRDGQLSFRGKRVLELSCGYGLPGIF--ACLKGA--GTVHFQDLS 67 (269)
Q Consensus 15 as~~La~~L~~~~~~~~~~~~~~~VLELGcGtGl~gl~--aa~~ga--~~Vv~tD~~ 67 (269)
+++.||-.|....-.+ ..+++.+|+=+|+|.+-.|++ +...|. +++++.|..
T Consensus 199 A~V~lAgllnAlki~g-k~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~ 254 (487)
T 3nv9_A 199 ASVTLAGLLNALKLVK-KDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSK 254 (487)
T ss_dssp HHHHHHHHHHHHHHHT-CCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETT
T ss_pred HHHHHHHHHHHHHHhC-CChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecc
Confidence 4566777665543323 356788999999999877764 334677 789999975
No 478
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=24.52 E-value=62 Score=28.47 Aligned_cols=39 Identities=21% Similarity=0.102 Sum_probs=26.7
Q ss_pred CCCCCEEEEEcCC--CCHHHHHH-HHcCCCeEEEEeCCHHHHH
Q 024311 33 SFRGKRVLELSCG--YGLPGIFA-CLKGAGTVHFQDLSAETIR 72 (269)
Q Consensus 33 ~~~~~~VLELGcG--tGl~gl~a-a~~ga~~Vv~tD~~~~vl~ 72 (269)
...|.+||-.|++ .|+..+.+ ...|+ +|+++|.+++-++
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~ 201 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQ 201 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 3468899999953 34444333 34677 8999999887653
No 479
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=24.50 E-value=1.4e+02 Score=25.01 Aligned_cols=38 Identities=16% Similarity=0.109 Sum_probs=27.7
Q ss_pred CCCCCCEEEEEcCCCCHHHHH----HHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGIF----ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl~----aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=.|++.| .|.. ++..|+ +|+++|.+++-+
T Consensus 14 ~~l~~k~vlVTGasgg-IG~~la~~l~~~G~-~V~~~~r~~~~~ 55 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATG-IGKAIVKELLELGS-NVVIASRKLERL 55 (303)
T ss_dssp TTTTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 3568899999997655 4533 334677 899999988655
No 480
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=24.16 E-value=1.2e+02 Score=26.20 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=30.9
Q ss_pred CCCCCCEEEEEcCCCCHHHHHHH--HcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGIFAC--LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl~aa--~~ga~~Vv~tD~~~~vl 71 (269)
...++++||=||||-..-+++.+ ..|+++|++.+.+.+=.
T Consensus 121 ~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra 162 (269)
T 3tum_A 121 FEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARM 162 (269)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHH
T ss_pred CCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHH
Confidence 45689999999999776665543 57888999999987533
No 481
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=24.08 E-value=1.7e+02 Score=25.91 Aligned_cols=67 Identities=10% Similarity=-0.033 Sum_probs=41.9
Q ss_pred CCCCccEEEEeccccccCCH-------HHHHHHHHHhcCCCC-eEEEEEEcccccccCcchHHHHHHhhhcCceeEEEEe
Q 024311 185 GEGGYDVILLTEIPYSVTSL-------KKLYLLIKKCLRPPY-GVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHLIK 256 (269)
Q Consensus 185 ~~~~fDlIlasD~iY~~~~~-------~~L~~~l~~~L~~p~-g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~~~ 256 (269)
...++|+|++ |.--+.-.. -.|++....+|+ |+ |.+++ |.+. ..+....+|+..++.. |-.+.+..
T Consensus 144 ~~~~~DlVls-D~APnsG~~~~D~~rs~~LL~~A~~~Lk-pG~G~FV~--KvF~-~yG~~~~~ll~~lk~~-F~~V~~~K 217 (300)
T 3eld_A 144 PTEPSDTLLC-DIGESSSNPLVERDRTMKVLENFERWKH-VNTENFCV--KVLA-PYHPDVIEKLERLQLR-FGGGIVRV 217 (300)
T ss_dssp CCCCCSEEEE-CCCCCCSSHHHHHHHHHHHHHHHHHHCC-TTCCEEEE--EESS-TTSHHHHHHHHHHHHH-HCCEEECC
T ss_pred CCCCcCEEee-cCcCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCcEEE--Eecc-ccCccHHHHHHHHHHh-CCcEEEEe
Confidence 3568999998 766552111 236777778898 77 76543 4332 1246788888888865 44455554
Q ss_pred e
Q 024311 257 E 257 (269)
Q Consensus 257 ~ 257 (269)
.
T Consensus 218 P 218 (300)
T 3eld_A 218 P 218 (300)
T ss_dssp T
T ss_pred C
Confidence 4
No 482
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=24.07 E-value=1.5e+02 Score=24.49 Aligned_cols=39 Identities=28% Similarity=0.362 Sum_probs=28.0
Q ss_pred CCCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=.|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~ 50 (267)
T 1iy8_A 9 TRFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGL 50 (267)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 35689999999987664332 2344687 899999998755
No 483
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=23.91 E-value=2.9e+02 Score=22.91 Aligned_cols=39 Identities=21% Similarity=0.194 Sum_probs=27.5
Q ss_pred CCCCCCEEEEEcCCCCHHH---HHHHHcCCCeEEEEeC-CHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPG---IFACLKGAGTVHFQDL-SAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~g---l~aa~~ga~~Vv~tD~-~~~vl 71 (269)
..+++++||=-|++.|+-. ..++..|+ +|+++|. +++.+
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~ 66 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAA 66 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHH
Confidence 3578999999998877533 22445787 8999998 55544
No 484
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=23.91 E-value=50 Score=28.95 Aligned_cols=38 Identities=24% Similarity=0.128 Sum_probs=27.0
Q ss_pred CCCCCEEEEEcCC--CCHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCG--YGLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcG--tGl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
...|.+||=.||+ .|+..+.++ ..|+ +|+++|.+++-+
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~ 197 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAAT 197 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHH
Confidence 3478899999983 355554433 4687 899999987654
No 485
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=23.76 E-value=3.1e+02 Score=22.72 Aligned_cols=38 Identities=26% Similarity=0.285 Sum_probs=27.9
Q ss_pred CCCCCCEEEEEcCCCCHHHHH----HHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGIF----ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl~----aa~~ga~~Vv~tD~~~~vl 71 (269)
..+++++||=.|++.|+ |.. ++..|+ +|+++|.+++-+
T Consensus 22 ~~l~~k~vlITGasggi-G~~la~~L~~~G~-~V~~~~r~~~~~ 63 (302)
T 1w6u_A 22 NSFQGKVAFITGGGTGL-GKGMTTLLSSLGA-QCVIASRKMDVL 63 (302)
T ss_dssp TTTTTCEEEEETTTSHH-HHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred ccCCCCEEEEECCCchH-HHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 35689999999987654 433 334677 899999988655
No 486
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=23.67 E-value=57 Score=28.79 Aligned_cols=34 Identities=24% Similarity=0.111 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCHHHH
Q 024311 35 RGKRVLELSCGYGLPGIFAC----LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 35 ~~~~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~~vl 71 (269)
.|.+||=+|+| -.|++++ ..|+ +|+++|.+++-+
T Consensus 180 ~g~~VlV~GaG--~vG~~a~qlak~~Ga-~Vi~~~~~~~~~ 217 (357)
T 2cf5_A 180 PGLRGGILGLG--GVGHMGVKIAKAMGH-HVTVISSSNKKR 217 (357)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHHTC-EEEEEESSTTHH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHHCCC-eEEEEeCChHHH
Confidence 68899999975 4554433 3687 899999987544
No 487
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=23.67 E-value=88 Score=27.61 Aligned_cols=37 Identities=24% Similarity=0.112 Sum_probs=26.9
Q ss_pred CCCCEEEEEcC-C-CCHHHHHHH-HcCCCeEEEEeCCHHHH
Q 024311 34 FRGKRVLELSC-G-YGLPGIFAC-LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 34 ~~~~~VLELGc-G-tGl~gl~aa-~~ga~~Vv~tD~~~~vl 71 (269)
..|.+||=.|+ | .|+..+.++ ..|+ +|+++|.+++-+
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~ 201 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKS 201 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHH
Confidence 36889999994 3 465554444 4677 899999988655
No 488
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=23.51 E-value=3e+02 Score=22.39 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=27.5
Q ss_pred CCCCCEEEEEcCCCCHHHHH----HHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIF----ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~----aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=.|++.|+ |.. ++..|+ +|+++|.+++-+
T Consensus 11 ~l~~k~vlVTGas~gI-G~~ia~~l~~~G~-~V~~~~r~~~~~ 51 (260)
T 2zat_A 11 PLENKVALVTASTDGI-GLAIARRLAQDGA-HVVVSSRKQENV 51 (260)
T ss_dssp TTTTCEEEESSCSSHH-HHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred CCCCCEEEEECCCcHH-HHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 4689999999987664 433 344677 899999988655
No 489
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=23.33 E-value=3.2e+02 Score=23.54 Aligned_cols=38 Identities=11% Similarity=-0.040 Sum_probs=26.8
Q ss_pred CCCCCEEEEEcCCCCHHHHHHH----Hc-CCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIFAC----LK-GAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa----~~-ga~~Vv~tD~~~~vl 71 (269)
.+++++||=.|+ +|..|-.++ .. |..+|++.+.++.-.
T Consensus 18 ~~~~k~vlVTGa-tG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~ 60 (344)
T 2gn4_A 18 MLDNQTILITGG-TGSFGKCFVRKVLDTTNAKKIIVYSRDELKQ 60 (344)
T ss_dssp TTTTCEEEEETT-TSHHHHHHHHHHHHHCCCSEEEEEESCHHHH
T ss_pred hhCCCEEEEECC-CcHHHHHHHHHHHhhCCCCEEEEEECChhhH
Confidence 468899998885 466664332 34 766899999987543
No 490
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=23.31 E-value=2.2e+02 Score=20.76 Aligned_cols=59 Identities=10% Similarity=0.045 Sum_probs=35.6
Q ss_pred CccEEEEeccccccC-----CHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCc
Q 024311 188 GYDVILLTEIPYSVT-----SLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGI 249 (269)
Q Consensus 188 ~fDlIlasD~iY~~~-----~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~ 249 (269)
.+|.|+-.=.+|... ....+++.+...|+ ..-.+++++--..+ +.....+.+.+++.|+
T Consensus 45 ~~d~iiig~pty~~g~~p~~~~~~fl~~l~~~l~-~k~~~~f~t~g~~~--~~a~~~l~~~l~~~G~ 108 (138)
T 5nul_A 45 NEDILILGCSAMTDEVLEESEFEPFIEEISTKIS-GKKVALFGSYGWGD--GKWMRDFEERMNGYGC 108 (138)
T ss_dssp TCSEEEEEECCBTTTBCCTTTHHHHHHHHGGGCT-TCEEEEEEEESSSC--SHHHHHHHHHHHHTTC
T ss_pred hCCEEEEEcCccCCCCCChHHHHHHHHHHHhhcC-CCEEEEEEecCCCC--ChHHHHHHHHHHHCCC
Confidence 678777656667643 35566666655444 33445555422211 3467888899999886
No 491
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=23.29 E-value=2.2e+02 Score=25.57 Aligned_cols=34 Identities=29% Similarity=0.265 Sum_probs=25.4
Q ss_pred CCCCCEEEEEcCCCCHHHHHH----HHcCCCeEEEEeCCHH
Q 024311 33 SFRGKRVLELSCGYGLPGIFA----CLKGAGTVHFQDLSAE 69 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~a----a~~ga~~Vv~tD~~~~ 69 (269)
.++|++|.=.|+| -.|..+ ...|+ +|+++|.++.
T Consensus 172 ~L~GktV~I~G~G--nVG~~~A~~l~~~Ga-kVvvsD~~~~ 209 (355)
T 1c1d_A 172 SLDGLTVLVQGLG--AVGGSLASLAAEAGA-QLLVADTDTE 209 (355)
T ss_dssp CSTTCEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSCHH
T ss_pred CCCCCEEEEECcC--HHHHHHHHHHHHCCC-EEEEEeCCcc
Confidence 5799999999775 445443 34788 8999999864
No 492
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=23.28 E-value=1.4e+02 Score=23.17 Aligned_cols=36 Identities=22% Similarity=0.134 Sum_probs=24.9
Q ss_pred CCCCCEEEEEcCCCCHHHHHHH----Hc-CCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIFAC----LK-GAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~aa----~~-ga~~Vv~tD~~~~vl 71 (269)
...+.+|+=+|+ |..|..++ .. |. +|++.|.+++.+
T Consensus 36 ~~~~~~v~IiG~--G~~G~~~a~~L~~~~g~-~V~vid~~~~~~ 76 (183)
T 3c85_A 36 NPGHAQVLILGM--GRIGTGAYDELRARYGK-ISLGIEIREEAA 76 (183)
T ss_dssp CCTTCSEEEECC--SHHHHHHHHHHHHHHCS-CEEEEESCHHHH
T ss_pred CCCCCcEEEECC--CHHHHHHHHHHHhccCC-eEEEEECCHHHH
Confidence 345778888876 55564433 34 66 799999998765
No 493
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=23.03 E-value=1.5e+02 Score=25.06 Aligned_cols=38 Identities=16% Similarity=0.111 Sum_probs=27.2
Q ss_pred CCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=-|++.|+-. + .++..|+ +|+++|.+++-+
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~ 65 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEV 65 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 457899999998877533 2 2445687 899999988765
No 494
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=22.87 E-value=76 Score=27.36 Aligned_cols=41 Identities=15% Similarity=0.242 Sum_probs=26.8
Q ss_pred CCccEEEEeccccccCCHHHHHHHHHHhcCCCCeEEEEEEcc
Q 024311 187 GGYDVILLTEIPYSVTSLKKLYLLIKKCLRPPYGVVYLATKK 228 (269)
Q Consensus 187 ~~fDlIlasD~iY~~~~~~~L~~~l~~~L~~p~g~~~va~k~ 228 (269)
.+||+||.+|+-.+ ..-+.-++.|++..+..+|.+.++...
T Consensus 49 ~~yDvIIl~d~~~~-~l~~~~~~~L~~yV~~GGgLi~~gG~~ 89 (259)
T 3rht_A 49 AKQDLVILSDYPAE-RMTAQAIDQLVTMVKAGCGLVMLGGWE 89 (259)
T ss_dssp HTCSEEEEESCCGG-GBCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred hcCCEEEEcCCccc-cCCHHHHHHHHHHHHhCCeEEEecCcc
Confidence 48999999986432 345677778888887444544444433
No 495
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=22.85 E-value=3.2e+02 Score=22.65 Aligned_cols=37 Identities=30% Similarity=0.368 Sum_probs=27.4
Q ss_pred CCCCCEEEEEcCCCCHHHHH----HHHcCCCeEEEEeCCHHHH
Q 024311 33 SFRGKRVLELSCGYGLPGIF----ACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~gl~----aa~~ga~~Vv~tD~~~~vl 71 (269)
.+++++||=.|++.|+ |.. ++..|+ +|+++|.+++-+
T Consensus 25 ~~~~k~vlITGasggI-G~~la~~l~~~G~-~V~~~~r~~~~~ 65 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGI-GREMAYHLAKMGA-HVVVTARSKETL 65 (286)
T ss_dssp GGTTCEEEESSCSSHH-HHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred hcCCCEEEEeCCCcHH-HHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 4688999999987654 432 334677 899999998765
No 496
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=22.73 E-value=1.7e+02 Score=23.47 Aligned_cols=31 Identities=10% Similarity=0.083 Sum_probs=20.7
Q ss_pred EEEEEcCCCCHHHHHHH----HcCCCeEEEEeCCHHHH
Q 024311 38 RVLELSCGYGLPGIFAC----LKGAGTVHFQDLSAETI 71 (269)
Q Consensus 38 ~VLELGcGtGl~gl~aa----~~ga~~Vv~tD~~~~vl 71 (269)
+|+=+|+ |..|..++ ..|. .|++.|.+++.+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~-~v~vid~~~~~~ 36 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKY-GVVIINKDRELC 36 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTC-CEEEEESCHHHH
T ss_pred EEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHH
Confidence 4555665 66664433 3465 899999999866
No 497
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=22.55 E-value=1.4e+02 Score=22.53 Aligned_cols=54 Identities=9% Similarity=0.113 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEEEcccccccCcchHHHHHHhhhcCceeEEEEeee
Q 024311 202 TSLKKLYLLIKKCLRPPYGVVYLATKKNYVGFNNAARHLRSLVDEEGIFGAHLIKEM 258 (269)
Q Consensus 202 ~~~~~L~~~l~~~L~~p~g~~~va~k~~~fg~~~~~~~F~~~~~~~g~~~~~~~~~~ 258 (269)
...+.+++.|..+ +.+.+++|.++-.. +..+...+-+..++.+||...++--++
T Consensus 4 qT~~qivd~il~~--~egtri~iLAPvv~-~rKg~~~~ll~~l~~~Gf~RvrvDGe~ 57 (119)
T 3fpn_A 4 MTIEQMVDRLLSY--PERTKMQILAPIVS-GKKGTHAKTLEDIRKQGYVRVRIDREM 57 (119)
T ss_dssp CCHHHHHHHHHTS--CTTCEEEEEEEEEE-EECSCCHHHHHHHHHTTCCEEEETTEE
T ss_pred CCHHHHHHHHHhC--CCCCEEEEEEEEee-CCCCcHHHHHHHHHhCCCeEEEECCEE
Confidence 3455566666543 35677777665533 345567888888999999877774443
No 498
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=22.40 E-value=3.3e+02 Score=22.47 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=25.4
Q ss_pred CCCCCEEEEEcCCCCHHH-H--HHHHcCCCeEEEEeCC
Q 024311 33 SFRGKRVLELSCGYGLPG-I--FACLKGAGTVHFQDLS 67 (269)
Q Consensus 33 ~~~~~~VLELGcGtGl~g-l--~aa~~ga~~Vv~tD~~ 67 (269)
.+++++||=-|++.|+-. + .++..|+ +|+++|.+
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 43 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC 43 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence 468999999998877533 1 2345687 89999986
No 499
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=22.31 E-value=1.4e+02 Score=24.98 Aligned_cols=39 Identities=15% Similarity=0.279 Sum_probs=28.9
Q ss_pred CCCCCCEEEEEcCCCCHHHH---HHHHcCCCeEEEEeCCHHHH
Q 024311 32 LSFRGKRVLELSCGYGLPGI---FACLKGAGTVHFQDLSAETI 71 (269)
Q Consensus 32 ~~~~~~~VLELGcGtGl~gl---~aa~~ga~~Vv~tD~~~~vl 71 (269)
..++|++||=-|++.|+-.- .++..|+ +|+++|.+++-+
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~ 64 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKL 64 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 35789999999988775332 2345687 899999988765
No 500
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=22.14 E-value=1.1e+02 Score=27.70 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=25.7
Q ss_pred CCCCEEEEEcCCCCHHHHH----HHHcCCCeEEEEeCCHHH
Q 024311 34 FRGKRVLELSCGYGLPGIF----ACLKGAGTVHFQDLSAET 70 (269)
Q Consensus 34 ~~~~~VLELGcGtGl~gl~----aa~~ga~~Vv~tD~~~~v 70 (269)
..|++|+=+|+| -.|.. +...|+++|++.|.+++-
T Consensus 165 l~g~~VlIiGaG--~iG~~~a~~l~~~G~~~V~v~~r~~~r 203 (404)
T 1gpj_A 165 LHDKTVLVVGAG--EMGKTVAKSLVDRGVRAVLVANRTYER 203 (404)
T ss_dssp CTTCEEEEESCC--HHHHHHHHHHHHHCCSEEEEECSSHHH
T ss_pred ccCCEEEEEChH--HHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence 578999999995 44433 234687799999998754
Done!