BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024312
(269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1
Length = 270
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/269 (76%), Positives = 243/269 (90%), Gaps = 1/269 (0%)
Query: 1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
M ++NN+TA+LN +ALLCSIPI ASGIWLASKPDNEC++L RWPVV+LGVL+L+VS GF
Sbjct: 1 MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60
Query: 61 IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
IGAY YKETLLA YLC MAILI LLLVVL+FAFVVTRPDGSY VPGR YKEYRL+ FS+W
Sbjct: 61 IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120
Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFF-SAHISPLQSGCCKPPTICGFS 179
L+++VVDSKNW ++RACLADT+ C KL+Q+++TADQFF S+ I+PLQSGCCKPPT CG++
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180
Query: 180 YVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVV 239
+VNPTLWLNP N D DC+LWSNDQSQLCYNC+SCKAGLLGNLR EWRKAN+ILI+ VV
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240
Query: 240 ILIWVYLIACSAFKNAQTEDLFRRYKRGW 268
+LIWVY+IACSAF+NAQTEDLFR+YK+GW
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQGW 269
>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1
Length = 269
Score = 273 bits (697), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 191/269 (71%)
Query: 1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
M +SNN+ +NFI +L SIP+I +GIWLA N C+ L +WPV++LGVL+LLV L GF
Sbjct: 1 MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60
Query: 61 IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
IG +W LL YL M ILIVLL ++ F ++VT + P RAY EY L FS W
Sbjct: 61 IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120
Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQSGCCKPPTICGFSY 180
LR V S W +IR CL+ T C +L+Q+Y A FF+AH+ P+QSGCCKPPT CGF++
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTF 180
Query: 181 VNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
VNPT W++P++ + D DC WSNDQ+ LCY C SCKAGLL N++ +W KA+I L++A++
Sbjct: 181 VNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIG 240
Query: 241 LIWVYLIACSAFKNAQTEDLFRRYKRGWT 269
LI VY+I C AF+NA+TED+FR+YK+G+T
Sbjct: 241 LIIVYIIGCCAFRNAETEDIFRKYKQGYT 269
>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1
Length = 285
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/265 (43%), Positives = 173/265 (65%), Gaps = 6/265 (2%)
Query: 1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDN-ECIHLFRWPVVLLGVLVLLVSLCG 59
M SN++ ++NF+ L SIPI+ GIWL+S+ ++ +C+ +WP++++G+ +++VSL G
Sbjct: 1 MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60
Query: 60 FIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSS 119
F GA + + L+ YL VM ++I L+ ++FA+ VT V R Y +Y L+ +S
Sbjct: 61 FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120
Query: 120 WLRDHVVDSKNWNKIRACLADTDTCSKLSQQY----VTADQFFSAHISPLQSGCCKPPTI 175
WL+D V D W KI +CL D+ C K+ + + TAD FF +SP++SGCCKPPT
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180
Query: 176 CGFSYVNPTLWLNPVNPTG-DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIIL 234
CGFSYVN T W G + DC +WSNDQS LCY CSSCKAG+LG+L+ WRK ++I
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240
Query: 235 IVAVVILIWVYLIACSAFKNAQTED 259
IV ++IL+ Y+IA +A++N + D
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRID 265
>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1
Length = 273
Score = 239 bits (609), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 168/263 (63%), Gaps = 3/263 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
SNN+ +LNF+ L SIPI+A GIWL+ K EC PV+ LGV +++V++ G IG+
Sbjct: 5 SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
LL YL VM +LI+L+ + VFAFVVT + G+ YKEY+L +S+WL+
Sbjct: 65 CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124
Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQYVT--ADQFFSAHISPLQSGCCKPPTICGFSYV 181
V + KNWNKIR+CL ++ CSKL ++V + F+ H++ LQSGCCKP CGF YV
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYV 184
Query: 182 NPTLWLNPVNPTG-DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
NPT W T +PDC W N + +LC++C SCKAGLL N+++ W+K I+ IV +V
Sbjct: 185 NPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVF 244
Query: 241 LIWVYLIACSAFKNAQTEDLFRR 263
LI VY + C AF+N + +D + R
Sbjct: 245 LIIVYSVGCCAFRNNKRDDSYSR 267
>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1
Length = 263
Score = 221 bits (563), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/267 (40%), Positives = 155/267 (58%), Gaps = 10/267 (3%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
SNN+ +LNF L SIPI+++GIWL EC P+V+LG+ ++ VS+ G +GA
Sbjct: 5 SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
LL YL M +LI+L +FAF VT + R YKEY + +S+WL+
Sbjct: 65 CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQK 124
Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQY--VTADQFFSAHISPLQSGCCKPPTICGFSYV 181
V ++KNW +IR+CL +D CS +Y + + F+ ++++ LQSGCCKP C F+YV
Sbjct: 125 RVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNFTYV 184
Query: 182 NPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVIL 241
NPT W P + DC +W N LCY+C +CKAGLL N++N W+K + IV ++ L
Sbjct: 185 NPTTWTKTPGPYKNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVFLIFL 244
Query: 242 IWVYLIACSAFKNAQTEDLFRRYKRGW 268
I VY + C AF+N + KR W
Sbjct: 245 IIVYSVGCCAFRNNR--------KRSW 263
>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1
Length = 272
Score = 212 bits (540), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 162/264 (61%), Gaps = 7/264 (2%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
SN++ +LNF L S+PI+++GIWL+ K +C P++ LGV ++++++ G +G+
Sbjct: 5 SNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVGS 64
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
LL YL VM LI+++L +FAFVVT + G+AYKEYRL+ +S WL+
Sbjct: 65 CCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQR 124
Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQYVTADQ----FFSAHISPLQSGCCKPPTICGFS 179
V ++K+WN IR+CL ++ C L + VTA+ F+ ++ +SGCCKP C F+
Sbjct: 125 RVNNAKHWNSIRSCLYESKFCYNL--ELVTANHTVSDFYKEDLTAFESGCCKPSNDCDFT 182
Query: 180 YVNPTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVV 239
Y+ T W + DC LW N++ +LCYNC +CKAG L NL+ W++ I+ I+ +V
Sbjct: 183 YITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIFLV 242
Query: 240 ILIWVYLIACSAFKNAQTEDLFRR 263
+L+ VY + C AF+N + ED + R
Sbjct: 243 LLVVVYAMGCCAFRNNK-EDRYGR 265
>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1
Length = 327
Score = 201 bits (510), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 170/262 (64%), Gaps = 6/262 (2%)
Query: 1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDN-ECIHLFRWPVVLLGVLVLLVSLCG 59
M +N+ ++NF L SIPI+ GIWL+S+ ++ +C+ +WP++++G+ ++++SL G
Sbjct: 1 MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60
Query: 60 FIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSS 119
GA + + L+ YL M +I L+ +FA+VVT +V R Y +Y L+ +S
Sbjct: 61 IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120
Query: 120 WLRDHVVDSKNWNKIRACLADTDTCSKLSQQY----VTADQFFSAHISPLQSGCCKPPTI 175
WL+D V D+ W I +C+ D+ C K+ + TA F+ ++SP++SGCCKPPT
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 180
Query: 176 CGFSYVNPTLWLNPVNPTG-DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIIL 234
CG++YVN T+W+ G +PDC LW+NDQ LCY CSSCKAG+LG+L+ WRK ++I
Sbjct: 181 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 240
Query: 235 IVAVVILIWVYLIACSAFKNAQ 256
IV V+IL+ Y+IAC+A++N +
Sbjct: 241 IVVVIILVIFYVIACAAYQNVK 262
>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1
Length = 282
Score = 184 bits (468), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 151/253 (59%), Gaps = 12/253 (4%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
SN + VLN + LL SIPII + ++ A + C + + P++++G ++L+VSL GFIGA
Sbjct: 5 SNTVIGVLNLLTLLASIPIIGTALYKA-RSSTTCENFLQTPLLVIGFIILIVSLAGFIGA 63
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
+ L YL VM LI L+ + +F VVT G VPGR YKEYRL + WLR+
Sbjct: 64 CFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPWLRE 123
Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQSGCCKPPTICGFSYVNP 183
V D + WN IR+C+ + TC+K+ + + T D +F ++ +QSGCCKPPT C +
Sbjct: 124 RVRDPEYWNSIRSCILSSKTCTKI-ESWTTLD-YFQRDMTSVQSGCCKPPTACTYE---- 177
Query: 184 TLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILIW 243
V+ G DCF W+N LCY C +CKAG+L +R +WRK +++ I+ +V+LI
Sbjct: 178 ---AGVVD--GGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIA 232
Query: 244 VYLIACSAFKNAQ 256
VY C AF N +
Sbjct: 233 VYAAGCCAFHNTR 245
>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1
Length = 271
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 150/262 (57%), Gaps = 8/262 (3%)
Query: 3 VSNNITAVLNFIALLCSIPIIASGIWL-ASKPDNECIHLFRWPVVLLGVLVLLVSLCGFI 61
VSN + + N + +L I I++ + +C R P++ G+++ LVSL G I
Sbjct: 4 VSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGVI 63
Query: 62 GAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWL 121
G+ + + + YL ++ IV L++ +F F VT V GR YKEYR FS+WL
Sbjct: 64 GSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWL 123
Query: 122 RDHVVDSKNWNKIRACLADTDTCSKLSQQYVT--ADQFFSAHISPLQSGCCKPPTICGFS 179
+ V K W IR+CLA+ + C LS V+ AD F+ ++SP+QSGCCKPP+ C F
Sbjct: 124 -NGFVGGKRWVGIRSCLAEANVCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDCNFE 182
Query: 180 YVNPTLWLNPV-NPTG---DPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILI 235
+ N T W+ P N T + DC WSN Q++LC+NC++CKAG+L N+R +WR + I
Sbjct: 183 FRNATFWIPPSKNETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLVFNI 242
Query: 236 VAVVILIWVYLIACSAFKNAQT 257
+++LI VY C A +N +T
Sbjct: 243 CLLILLITVYSCGCCARRNNRT 264
>sp|F4I214|TET10_ARATH Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1
Length = 284
Score = 181 bits (458), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 148/243 (60%), Gaps = 2/243 (0%)
Query: 1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
MG S + +N + +L ++ +I G+W+++ D C +PV+ LG + L+S+ GF
Sbjct: 3 MGTSTFVIRWVNLLTMLLAVAVIIFGVWMSTHNDG-CRRSLTFPVIALGGFIFLISIIGF 61
Query: 61 IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
+GA LL YL V+ I+++ +LV V AF+VT + PG YKEY+L+ +SSW
Sbjct: 62 LGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSW 121
Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQSGCCKPPTICGFSY 180
+ ++ NW ++++CL ++ C KLS++Y T Q SA ++P+++GCC+PP+ CG+
Sbjct: 122 FLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYPA 181
Query: 181 VNPTLW-LNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVV 239
VN + + L+ + + + DC L+ N ++ CYNC SCKAG+ ++ EWR I +V V
Sbjct: 182 VNASYYDLSFHSISSNKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNVVLFV 241
Query: 240 ILI 242
+LI
Sbjct: 242 VLI 244
>sp|Q84WF6|TET5_ARATH Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1
Length = 281
Score = 174 bits (440), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 149/254 (58%), Gaps = 11/254 (4%)
Query: 3 VSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIG 62
+SN + LN + L+ SI ++ S +W+ + C H + P+++LG+ +L++S+ G +G
Sbjct: 4 MSNTVIGFLNILTLISSIVLLGSALWMG-RSKTTCEHFLQKPLLILGLAILILSVAGLVG 62
Query: 63 AYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLR 122
A +L YL M +IV L+ + +F F+VT G V GR YKE++L+ + WL+
Sbjct: 63 ACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEAYHPWLK 122
Query: 123 DHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQSGCCKPPTICGFSYVN 182
VVD+ W I+ CL + TCSKL+ T + +SPLQSGCCKPPT C ++
Sbjct: 123 TRVVDTNYWVTIKTCLLGSVTCSKLALW--TPLDYLQKDLSPLQSGCCKPPTSCVYN--- 177
Query: 183 PTLWLNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILI 242
DPDC+ W+N + LCY+C +C+AG+L +R +W K +++ ++ V+ LI
Sbjct: 178 -----TDTVIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLI 232
Query: 243 WVYLIACSAFKNAQ 256
VY + C AFKNA+
Sbjct: 233 AVYCVGCCAFKNAK 246
>sp|Q9FN51|TET12_ARATH Tetraspanin-12 OS=Arabidopsis thaliana GN=TET12 PE=2 SV=1
Length = 264
Score = 131 bits (329), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 130/254 (51%), Gaps = 5/254 (1%)
Query: 3 VSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIG 62
+SN N I L + ++ +++ + ++C + P+++ L+ +S G I
Sbjct: 4 LSNAAVITTNAILALIGLAALSFSVYVYVQGPSQCQRFVQNPLIVTAALLFFISSLGLIA 63
Query: 63 AYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLR 122
A + ++ YL + + I+LLLV+ VF F+VT P + GR + + +W+
Sbjct: 64 ALYGSHIIITLYLFFLFLSILLLLVLSVFIFLVTNPTAGKALSGRGIGNVKTGDYQNWIG 123
Query: 123 DHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQSGCCKPPTICGFSYVN 182
+H + KNW I CL+D+ C + + + D S H+S +Q GCC+PP CGF N
Sbjct: 124 NHFLRGKNWEGITKCLSDSRVCKRFGPRDIDFD---SKHLSNVQFGCCRPPVECGFESKN 180
Query: 183 PTLWLNPVNPTGD--PDCFLWSNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVI 240
T W P T DC WSN Q QLCY C SCK G+L +R WR ++ ++ +++
Sbjct: 181 ATWWTVPATATTAIIGDCKAWSNTQRQLCYACESCKIGVLKGIRKRWRILIVVNLLLILL 240
Query: 241 LIWVYLIACSAFKN 254
++++Y C KN
Sbjct: 241 VVFLYSCGCCVRKN 254
>sp|Q9SI56|TET13_ARATH Tetraspanin-13 OS=Arabidopsis thaliana GN=TET13 PE=3 SV=1
Length = 278
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 8/231 (3%)
Query: 2 GVSNNITAVLNFIALLCS-IPIIASGIWLAS-----KPDNECIHLFRWPVVLLGVLVLLV 55
+ N++ N I L+ S I ++ + W + +EC P + + +L +
Sbjct: 14 SIVQNMSFPFNTIFLISSAIFLVTAAFWFVAVMTLHYRTDECNRFVTTPGIFISFSLLAM 73
Query: 56 SLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLD 115
SL GF AY+ + L + + + + +++ +F + + PG E+R +
Sbjct: 74 SLTGFYAAYFKSDCLFRIHFFIFFLWMFVVVSKAIFVIFLHKETNPRLFPGTKIYEFRYE 133
Query: 116 KFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQSGCCKPPTI 175
+S W+ V+ W + R CL + C++L+ + + A +F+ +++P+QSGCCKPP
Sbjct: 134 DYSGWVSRLVIKDDEWYRTRRCLVKDNVCNRLNHK-MPASEFYQMNLTPIQSGCCKPPLS 192
Query: 176 CGFSYVNPTLW-LNPVNPTGDPDCFLWSNDQSQLCYNCSSCKAGLLGNLRN 225
CG +Y P W ++ + DC W+N LC++C SCKA ++ ++ N
Sbjct: 193 CGLNYEKPNNWTVSRYYNNLEVDCKRWNNSADTLCFDCDSCKAVIIADVHN 243
>sp|Q1PDI1|TET15_ARATH Tetraspanin-15 OS=Arabidopsis thaliana GN=TET15 PE=2 SV=1
Length = 317
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 100 GSYYVPGRAYKEYRLDKFSSWLRDHVVDSK-NWNKIRACLADTDTCSKLSQQYVTADQFF 158
G Y + R W + ++D WN I++C+ D C+ L +
Sbjct: 141 GLAYAGVNEMQSRRFPATRMWFKLKIMDDHVTWNNIKSCVYDKGACNDLIYGSPNEKPYN 200
Query: 159 SAHISPLQSGCCKPPTICGFSYVNPTLWLNPVNPTGDP-----------------DCFLW 201
+ P+++GCC PP C +N T W + G P DC LW
Sbjct: 201 RRKMPPIKNGCCMPPETCNMDAINATFWYRRKD-EGPPSSMNLMYGDEMMVGRISDCQLW 259
Query: 202 SNDQSQLCYNCSSCKAGLLGNLRNEWRKANIILIVAVVILIWVYLI 247
ND S LCY+C SCK G + ++R +W + I LIV ++L+ +L+
Sbjct: 260 RNDWSILCYDCRSCKFGFIRSVRRKWWQLGIFLIVISILLLMSHLL 305
>sp|Q12999|TSN31_HUMAN Tetraspanin-31 OS=Homo sapiens GN=TSPAN31 PE=2 SV=1
Length = 210
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L S+ +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIG-GVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVT 96
+ + LL FY+ ++L +V +F FV++
Sbjct: 68 VNHHQVLLFFYM-------IILGLVFIFQFVIS 93
>sp|Q5RAP8|TSN31_PONAB Tetraspanin-31 OS=Pongo abelii GN=TSPAN31 PE=2 SV=1
Length = 210
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L S+ +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIG-GVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVT 96
+ + LL FY+ ++L +V +F FV++
Sbjct: 68 VNHHQVLLFFYM-------IILGLVFIFQFVIS 93
>sp|Q32KP1|TSN31_BOVIN Tetraspanin-31 OS=Bos taurus GN=TSPAN31 PE=2 SV=1
Length = 210
Score = 38.5 bits (88), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L + +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SKNALCALNVVYMLVGLLLIGVAAWAKGLGLVSSIHIIG-GVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIVL 84
+ + LL FY+ ++ ++ +
Sbjct: 68 VNHHQVLLFFYMIILGLVFIF 88
>sp|Q5U1V9|TSN31_RAT Tetraspanin-31 OS=Rattus norvegicus GN=Tspan31 PE=2 SV=1
Length = 210
Score = 38.1 bits (87), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L + +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SKNALCALNVVYMLVGLLLIGVAAWGKGLGVVSSIHIIG-GVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIVL 84
+ + LL FY+ ++ ++ +
Sbjct: 68 VNHHQVLLFFYMIILGLVFIF 88
>sp|Q9CQ88|TSN31_MOUSE Tetraspanin-31 OS=Mus musculus GN=Tspan31 PE=1 SV=1
Length = 210
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SRNALCALNVVYMLVGFLLIGVAAWGKGLGVVSSIHII-GGVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIVL 84
+ + LL FY+ ++ ++ +
Sbjct: 68 ANHHQVLLFFYMIILGLVFIF 88
>sp|Q7ZUB3|TSN31_DANRE Tetraspanin-31 OS=Danio rerio GN=tspan31 PE=2 SV=2
Length = 212
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L + +I W IH+ V+ +G + L+++ G IGA
Sbjct: 9 SKNALCSLNVVYMLVGLLLIVVAAWGKGFGIVSSIHII-GGVIAVGFFLQLIAIVGLIGA 67
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVT 96
+ + +L FY+ V+L VV +F F V+
Sbjct: 68 VHHHQVMLFFYM-------VILFVVFLFQFGVS 93
>sp|Q29257|TSN31_PIG Tetraspanin-31 (Fragment) OS=Sus scrofa GN=TSPAN31 PE=3 SV=1
Length = 109
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L + +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SKNALCALNVVYMLVGLLLIGVAAWAKGLGLVSSIHIIG-GVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIV 83
+ + LL FY+ ++ ++ +
Sbjct: 68 VNHHQVLLFFYMIILGLVFI 87
>sp|O31464|GLNT_BACSU Probable sodium/glutamine symporter GlnT OS=Bacillus subtilis
(strain 168) GN=glnT PE=3 SV=2
Length = 478
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 39 HLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAF 73
H+ W L +L+LL C IG Y+Y ET + F
Sbjct: 340 HVGSWASGFLAILILLFGFCALIGNYYYGETNIGF 374
>sp|Q58G33|TET14_ARATH Tetraspanin-14 OS=Arabidopsis thaliana GN=TET14 PE=2 SV=1
Length = 260
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 165 LQSGCCKPPTICGFSYVNPTLWLNPVNPTGDP-----------------DCF-LWSNDQS 206
+++GCC P C VN TLW+ N G P D + +W ++ S
Sbjct: 165 VKTGCCNRPGNCKLETVNATLWVT-RNREGPPLETAMIYDRYGGNADIKDYYDMWRHELS 223
Query: 207 QLCYNCSSCKAGLLGNLR-NEWRKANIIL 234
L Y+C +C+ ++ + R +W + + L
Sbjct: 224 VLYYDCMTCQVRIIKSPRLRKWWQFGVFL 252
>sp|A1L157|TSN11_HUMAN Tetraspanin-11 OS=Homo sapiens GN=TSPAN11 PE=2 SV=2
Length = 253
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 10 VLNFIALLCSIPIIASGIW-LASKPD------NECIHLFRWPVVLLGVLVLLVSLCGFIG 62
V NF + ++A GIW L K + + ++ GVLV++ GF
Sbjct: 22 VFNFFFWVGGAAVLAVGIWTLVEKSGYLSVLASSTFAASAYILIFAGVLVMVTGFLGFGA 81
Query: 63 AYWYKETLLAFYLCVMAILIVLLLVVLVFAFV 94
W ++ L+ Y C++ ++ ++ LV V A V
Sbjct: 82 ILWERKGCLSTYFCLLLVIFLVELVAGVLAHV 113
>sp|Q68VK5|TSN5_RAT Tetraspanin-5 OS=Rattus norvegicus GN=Tspan5 PE=2 SV=2
Length = 268
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 43 WPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTR--PDG 100
W +++G ++ ++ G IGA LL F+ + I+ L L V AFV D
Sbjct: 63 WLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQ 122
Query: 101 SYYVPGRAYKEYRLD 115
Y+ + YR D
Sbjct: 123 LYFFINNNIRAYRDD 137
>sp|P62080|TSN5_MOUSE Tetraspanin-5 OS=Mus musculus GN=Tspan5 PE=2 SV=1
Length = 268
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 43 WPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTR--PDG 100
W +++G ++ ++ G IGA LL F+ + I+ L L V AFV D
Sbjct: 63 WLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQ 122
Query: 101 SYYVPGRAYKEYRLD 115
Y+ + YR D
Sbjct: 123 LYFFINNNIRAYRDD 137
>sp|P62079|TSN5_HUMAN Tetraspanin-5 OS=Homo sapiens GN=TSPAN5 PE=2 SV=1
Length = 268
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 43 WPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTR--PDG 100
W +++G ++ ++ G IGA LL F+ + I+ L L V AFV D
Sbjct: 63 WLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQ 122
Query: 101 SYYVPGRAYKEYRLD 115
Y+ + YR D
Sbjct: 123 LYFFINNNIRAYRDD 137
>sp|Q17QJ5|TSN5_BOVIN Tetraspanin-5 OS=Bos taurus GN=TSPAN5 PE=2 SV=1
Length = 268
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 43 WPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTR--PDG 100
W +++G ++ ++ G IGA LL F+ + I+ L L V AFV D
Sbjct: 63 WLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQ 122
Query: 101 SYYVPGRAYKEYRLD 115
Y+ + YR D
Sbjct: 123 LYFFINNNIRAYRDD 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.141 0.474
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,548,510
Number of Sequences: 539616
Number of extensions: 4322762
Number of successful extensions: 13031
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 12961
Number of HSP's gapped (non-prelim): 69
length of query: 269
length of database: 191,569,459
effective HSP length: 115
effective length of query: 154
effective length of database: 129,513,619
effective search space: 19945097326
effective search space used: 19945097326
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)