Query 024312
Match_columns 269
No_of_seqs 195 out of 1111
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 06:04:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024312.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024312hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g8qa_ a.135.1.1 (A:) CD81 ex 40.6 5.1 0.00037 27.4 1.5 40 108-149 10-49 (90)
2 d1oedc_ f.36.1.1 (C:) Acetylch 34.2 43 0.0032 25.8 6.7 81 8-91 3-84 (260)
3 d1sb6a_ d.58.17.1 (A:) Copper 14.5 36 0.0026 20.7 1.7 16 211-226 11-26 (64)
4 d1kqha_ g.3.6.2 (A:) ACTX-HI:O 13.5 27 0.0019 18.9 0.7 7 167-173 15-21 (38)
5 d1q90l_ f.23.24.1 (L:) PetL su 13.0 98 0.0071 16.0 3.0 18 12-29 6-23 (32)
6 d1fe0a_ d.58.17.1 (A:) ATX1 me 12.6 41 0.003 20.7 1.5 15 211-225 10-24 (66)
7 d2e74g1 f.23.26.1 (G:9-35) Pet 11.5 1E+02 0.0075 15.4 3.0 23 235-259 3-25 (27)
8 d1cpza_ d.58.17.1 (A:) Copper 11.4 53 0.0038 20.0 1.8 16 211-226 10-25 (68)
9 d1oedb_ f.36.1.1 (B:) Acetylch 11.1 2.9E+02 0.021 20.4 6.9 74 8-84 3-77 (250)
10 d1qupa2 d.58.17.1 (A:2-73) Cop 10.9 44 0.0032 20.9 1.3 15 211-225 15-29 (72)
No 1
>d1g8qa_ a.135.1.1 (A:) CD81 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.64 E-value=5.1 Score=27.41 Aligned_cols=40 Identities=18% Similarity=0.230 Sum_probs=23.8
Q ss_pred chhhhhhhhchHHHhhhccCccchHHHHHhhhcCCcccCccc
Q 024312 108 AYKEYRLDKFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQ 149 (269)
Q Consensus 108 ~~~~y~~~~~~~wlq~~~~~~~~wd~iq~cl~~~~~Ccg~~~ 149 (269)
.+++++.+.|.+++++. .+.+....-.-++.++.|||..+
T Consensus 10 ev~~FY~~~Y~~y~~~~--~~~~~k~tLk~fH~~L~CCG~~~ 49 (90)
T d1g8qa_ 10 DVKQFYDQALQQAVVDD--DANNAKAVVKTFHETLDCCGSST 49 (90)
T ss_dssp HHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHHTCCSCTT
T ss_pred HHHHHHHHHHHHHhhcC--CcchHHHHHHHHHHHHccCCCCC
Confidence 45566666676665433 23334433334566999999876
No 2
>d1oedc_ f.36.1.1 (C:) Acetylcholine receptor protein, delta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=34.22 E-value=43 Score=25.75 Aligned_cols=81 Identities=19% Similarity=0.153 Sum_probs=36.9
Q ss_pred HHHHHHHH-HHHHHHHHHHHHhhhccCCCcchhhhhhHHHHHHHHHHHHHHhhhhhhhccchhhHHHHHHHHHHHHHHHH
Q 024312 8 TAVLNFIA-LLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLL 86 (269)
Q Consensus 8 l~~~N~l~-~l~G~~ll~~Gi~~~~~~~~~~~~~~~~p~i~~G~~~~~vs~~Gc~Ga~~es~~lL~~y~~~l~~l~i~el 86 (269)
.+++|+++ .++=.++-.+|.|+-.+. .++......+.++..++.+.+-.-.=...+...++..|+.+.++++.+-+
T Consensus 3 ~y~~n~~~P~~~~~~l~~~~f~lp~~~---~~r~~l~it~lLs~~vf~~~v~~~lP~tS~~vPli~~y~~~~~~~v~~s~ 79 (260)
T d1oedc_ 3 FYVINFITPCVLISFLASLAFYLPAES---GEKMSTAISVLLAQAVFLLLTSQRLPETALAVPLIGKYLMFIMSLVTGVI 79 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTHHHHHHHHHHHHHH
T ss_pred eEEEhHHHHHHHHHHHHHHHeeeCCCC---CCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 45667664 222222334566665443 12332222233444444444433333334455666666666555555544
Q ss_pred HHHhh
Q 024312 87 VVLVF 91 (269)
Q Consensus 87 ~~~i~ 91 (269)
+..++
T Consensus 80 ~~t~~ 84 (260)
T d1oedc_ 80 VNCGI 84 (260)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44433
No 3
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=14.53 E-value=36 Score=20.65 Aligned_cols=16 Identities=25% Similarity=0.706 Sum_probs=13.2
Q ss_pred cCcchHHHHHHHHHHh
Q 024312 211 NCSSCKAGLLGNLRNE 226 (269)
Q Consensus 211 ~c~gC~~~i~~~l~~~ 226 (269)
.|.+|..++.+-+++.
T Consensus 11 ~C~~C~~~Ie~~l~~~ 26 (64)
T d1sb6a_ 11 ACEACAEAVTKAVQNE 26 (64)
T ss_dssp TSSSCTHHHHHHHHHH
T ss_pred cchhHHHHHHHHHhcC
Confidence 5889999999888753
No 4
>d1kqha_ g.3.6.2 (A:) ACTX-HI:OB4219 {Funnel-web spider (Hadronyche infensa) [TaxId: 153481]}
Probab=13.52 E-value=27 Score=18.95 Aligned_cols=7 Identities=57% Similarity=1.502 Sum_probs=5.1
Q ss_pred cCccCCC
Q 024312 167 SGCCKPP 173 (269)
Q Consensus 167 ~sCC~~p 173 (269)
+|||+|-
T Consensus 15 dscckpy 21 (38)
T d1kqha_ 15 DSCCKPY 21 (38)
T ss_dssp CCBCTTC
T ss_pred Cccccce
Confidence 5799863
No 5
>d1q90l_ f.23.24.1 (L:) PetL subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=12.97 E-value=98 Score=16.00 Aligned_cols=18 Identities=28% Similarity=0.650 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 024312 12 NFIALLCSIPIIASGIWL 29 (269)
Q Consensus 12 N~l~~l~G~~ll~~Gi~~ 29 (269)
+.+=.++|...+.+|+|+
T Consensus 6 syvglligal~~tlgiyl 23 (32)
T d1q90l_ 6 SYVGLLIGALVFTLGIYL 23 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344456777777778775
No 6
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}
Probab=12.62 E-value=41 Score=20.68 Aligned_cols=15 Identities=20% Similarity=0.578 Sum_probs=12.5
Q ss_pred cCcchHHHHHHHHHH
Q 024312 211 NCSSCKAGLLGNLRN 225 (269)
Q Consensus 211 ~c~gC~~~i~~~l~~ 225 (269)
.|.+|..+|.+-+++
T Consensus 10 ~C~~C~~~I~~aL~~ 24 (66)
T d1fe0a_ 10 TCGGCAEAVSRVLNK 24 (66)
T ss_dssp CSHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhc
Confidence 588999999988764
No 7
>d2e74g1 f.23.26.1 (G:9-35) PetG subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=11.55 E-value=1e+02 Score=15.39 Aligned_cols=23 Identities=13% Similarity=0.138 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhchhh
Q 024312 235 IVAVVILIWVYLIACSAFKNAQTED 259 (269)
Q Consensus 235 i~i~~~~i~~~~~ac~l~~~~~~~~ 259 (269)
+++++..+.|.++| ++++.+|++
T Consensus 3 lgli~~tl~glf~a--ayqqykrpn 25 (27)
T d2e74g1 3 LGLVFATLGGLFYA--AYQQYKRPN 25 (27)
T ss_dssp HHHHHHHHHHHHHH--HHHHTTSCC
T ss_pred eeehHHHHHHHHHH--HHHHhcCCC
Confidence 55667777777774 445555543
No 8
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=11.39 E-value=53 Score=20.05 Aligned_cols=16 Identities=19% Similarity=0.451 Sum_probs=13.4
Q ss_pred cCcchHHHHHHHHHHh
Q 024312 211 NCSSCKAGLLGNLRNE 226 (269)
Q Consensus 211 ~c~gC~~~i~~~l~~~ 226 (269)
.|.+|...+.+-+++.
T Consensus 10 ~C~~C~~~Ie~~l~~~ 25 (68)
T d1cpza_ 10 SCNHCVARIEEAVGRI 25 (68)
T ss_dssp CSSSHHHHHHHHHHTS
T ss_pred EcHHHHHHHHHHHhcC
Confidence 5889999999988764
No 9
>d1oedb_ f.36.1.1 (B:) Acetylcholine receptor protein, beta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=11.11 E-value=2.9e+02 Score=20.41 Aligned_cols=74 Identities=19% Similarity=0.177 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHH-HHHHhhhccCCCcchhhhhhHHHHHHHHHHHHHHhhhhhhhccchhhHHHHHHHHHHHHHH
Q 024312 8 TAVLNFIALLCSIPII-ASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVL 84 (269)
Q Consensus 8 l~~~N~l~~l~G~~ll-~~Gi~~~~~~~~~~~~~~~~p~i~~G~~~~~vs~~Gc~Ga~~es~~lL~~y~~~l~~l~i~ 84 (269)
.+++|+++=.+=+.++ .+|.|+-.+. .++......+.++..++.+.+-.-.=..-+...++..|..+.++++.+
T Consensus 3 ~y~~~~~~P~~~i~~l~~~~f~~p~~~---~er~~l~it~lL~~~~~~~~v~~~~P~~s~~~p~i~~~~~~~~~~~~~ 77 (250)
T d1oedb_ 3 FYIVYTIIPCILISILAILVFYLPPDA---GEKMSLSISALLAVTVFLLLLADKVPETSLSVPIIIRYLMFIMILVAF 77 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCTTHHHHHHHHHH
T ss_pred EEEEeHHHHHHHHHHHHHHHheecCCC---CCcEEeeHHHHHHHHHHHHHHHHhCCCCcCcchHHHHHHHHHHHHHHH
Confidence 4566665322222222 4556665432 224322222333444444433333333333444555555555444443
No 10
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=10.88 E-value=44 Score=20.86 Aligned_cols=15 Identities=27% Similarity=0.740 Sum_probs=12.7
Q ss_pred cCcchHHHHHHHHHH
Q 024312 211 NCSSCKAGLLGNLRN 225 (269)
Q Consensus 211 ~c~gC~~~i~~~l~~ 225 (269)
.|++|...|.+-+++
T Consensus 15 ~C~~C~~~Iek~l~~ 29 (72)
T d1qupa2 15 HCENCVNDIKACLKN 29 (72)
T ss_dssp CSTTHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHhc
Confidence 689999999988764
Done!