BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024313
(269 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LPO|A Chain A, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|B Chain B, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|C Chain C, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|D Chain D, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPP|A Chain A, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|B Chain B, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|C Chain C, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|D Chain D, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
Length = 898
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSIS 243
H++YG MA +T + ++ +KR F+LTR+ F GS R+AA W GDN ++WE + SI+
Sbjct: 526 HSLYGYSMAIATEQAVQKVFPNKRSFILTRSTFAGSGRHAAHWLGDNTASWEQMEWSIT 584
>pdb|3L4T|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Bj2661
pdb|3L4U|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With De-O-Sulfonated Kotalanol
pdb|3L4V|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Kotalanol
pdb|3L4W|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Miglitol
pdb|3L4X|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Nr4-8
pdb|3L4Y|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Nr4-8ii
pdb|3L4Z|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Salacinol
Length = 875
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSI 242
H +YG MA +T E K +KR F+LTR+ F GS ++AA W GDN + W+ L SI
Sbjct: 497 HNLYGYSMAVATAEAAKTVFPNKRSFILTRSTFAGSGKFAAHWLGDNTATWDDLRWSI 554
>pdb|2QLY|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|2QMJ|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
pdb|3CTT|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Casuarine
Length = 870
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSI 242
H +YG MA +T E K +KR F+LTR+ F GS ++AA W GDN + W+ L SI
Sbjct: 497 HNLYGYSMAVATAEAAKTVFPNKRSFILTRSTFAGSGKFAAHWLGDNTATWDDLRWSI 554
>pdb|3M6D|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3M6D|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3MKK|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
In Complex With Isomaltose
pdb|3MKK|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
In Complex With Isomaltose
pdb|3POC|A Chain A, The Crystal Structure Of The D307a Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3POC|B Chain B, The Crystal Structure Of The D307a Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
Length = 666
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISM 244
H ++G M R+ E + D +KR + +R+ +IG RY W GDN S W H+ +++ M
Sbjct: 378 HNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKM 437
>pdb|3M46|A Chain A, The Crystal Structure Of The D73a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3M46|B Chain B, The Crystal Structure Of The D73a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
Length = 666
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISM 244
H ++G M R+ E + D +KR + +R+ +IG RY W GDN S W H+ +++ M
Sbjct: 378 HNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKM 437
>pdb|3PHA|A Chain A, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|B Chain B, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|C Chain C, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|D Chain D, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
Length = 667
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISM 244
H ++G M R+ E + D +KR + +R+ +IG RY W GDN S W H+ +++ M
Sbjct: 378 HNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKM 437
>pdb|3NUK|A Chain A, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174
pdb|3NUK|B Chain B, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174
Length = 666
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISM 244
H ++G M R+ E + D +KR + +R+ +IG RY W GDN S W H+ +++ M
Sbjct: 378 HNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKM 437
>pdb|2G3M|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|B Chain B, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|C Chain C, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|D Chain D, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|E Chain E, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|F Chain F, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3N|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|B Chain B, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|C Chain C, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|D Chain D, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|E Chain E, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|F Chain F, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
Length = 693
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 188 YGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISM 244
Y + A +T++G + + +++ F+L+RAG+ G QRYA WTGDN +W+ L + + +
Sbjct: 375 YPLYEAMATFKGFRTSHRNE-IFILSRAGYAGIQRYAFIWTGDNTPSWDDLKLQLQL 430
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 75 IVKLEFPAGTSLYGTGEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNG 134
IV+ + G GE + +L+R KR +N DA Y LY S P ++V +G
Sbjct: 53 IVEKSLDLKEHIIGLGEKAFELDRKRKRYVMYNVDAGAYKKYQDPLYVSIPLFISV-KDG 111
Query: 135 EALGVLADTTRRCEIDLRKESTIQFIA 161
A G ++ + D+ E + I
Sbjct: 112 VATGYFFNSASKVIFDVGLEEYDKVIV 138
>pdb|3NSX|A Chain A, The Crystal Structure Of The The Crystal Structure Of The
D420a Mutant Of The Alpha-Glucosidase (Family 31) From
Ruminococcus Obeum Atcc 29174
pdb|3NSX|B Chain B, The Crystal Structure Of The The Crystal Structure Of The
D420a Mutant Of The Alpha-Glucosidase (Family 31) From
Ruminococcus Obeum Atcc 29174
Length = 666
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSISM 244
H ++G M R+ E + D +KR + +R+ +IG RY W G N S W H+ +++ M
Sbjct: 378 HNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGANKSWWSHILLNLKM 437
>pdb|2XVG|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus
pdb|2XVK|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus In Complex With
5-Fluoro-Alpha-D-Xylopyranosyl Fluoride
pdb|2XVL|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus In Complex With Pentaerythritol
Propoxylate (5 4 Po Oh)
Length = 1020
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 188 YGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRY-AATWTGDNVSNWEHLHMSIS 243
Y + A Y+G D DKR F+LTR+GF G QR +A W+GD VS W + I+
Sbjct: 616 YAVPHAEGVYQGELATDGDKRSFILTRSGFGGIQRTGSAIWSGDIVSRWSDMKDQIA 672
>pdb|3N04|A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31)
From Ruminococcus Obeum Atcc 29174
pdb|3N04|B Chain B, The Crystal Structure Of The Alpha-Glucosidase (Family 31)
From Ruminococcus Obeum Atcc 29174
Length = 666
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSIS 243
H ++G R+ E + D +KR +R+ +IG RY W GDN S W H+ +++
Sbjct: 378 HNLFGYNXTRAAGEAFERIDPEKRFLXFSRSSYIGXHRYGGIWXGDNKSWWSHILLNLK 436
>pdb|2F2H|A Chain A, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|B Chain B, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|C Chain C, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|D Chain D, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|E Chain E, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|F Chain F, Structure Of The Yici Thiosugar Michaelis Complex
Length = 773
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 12/154 (7%)
Query: 30 DCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQCVRGQQIVKLEFPAGTSLYGT 89
+ SA + + SL F+ +R T + Y R +L+ G ++YG
Sbjct: 107 NLSARVSKGEFWSLDFLRNGERITGSQVKNN-GYVQDTNNQRNYMFERLDLGVGETVYGL 165
Query: 90 GEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRC-- 147
GE L R G+ + TWN D GT T Y++ P+ + GVL + +C
Sbjct: 166 GERFTALVRNGQTVETWNRDG---GTSTEQAYKNIPFYMT----NRGYGVLVNHP-QCVS 217
Query: 148 -EIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVL 180
E+ K S +QF S Y + +P AVL
Sbjct: 218 FEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVL 251
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSI 242
H Y + + +K ++ + R+ +G+Q++ W GD +N+E + S+
Sbjct: 437 HNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESL 494
>pdb|1XSI|A Chain A, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|B Chain B, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|C Chain C, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|D Chain D, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|E Chain E, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|F Chain F, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|A Chain A, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|B Chain B, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|C Chain C, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|D Chain D, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|E Chain E, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|F Chain F, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSK|A Chain A, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|B Chain B, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|C Chain C, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|D Chain D, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|E Chain E, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|F Chain F, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
Length = 778
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 12/154 (7%)
Query: 30 DCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQCVRGQQIVKLEFPAGTSLYGT 89
+ SA + + SL F+ +R T + Y R +L+ G ++YG
Sbjct: 107 NLSARVSKGEFWSLDFLRNGERITGSQVKNN-GYVQDTNNQRNYMFERLDLGVGETVYGL 165
Query: 90 GEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRC-- 147
GE L R G+ + TWN D GT T Y++ P+ + GVL + +C
Sbjct: 166 GERFTALVRNGQTVETWNRDG---GTSTEQAYKNIPFYMT----NRGYGVLVNHP-QCVS 217
Query: 148 -EIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVL 180
E+ K S +QF S Y + +P AVL
Sbjct: 218 FEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVL 251
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSI 242
H Y + + +K ++ + R+ +G+Q++ W GD +N+E + S+
Sbjct: 437 HNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESL 494
>pdb|3TON|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TON|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TOP|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
pdb|3TOP|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
Length = 908
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSI 242
H +YG R TYE ++ +R V+TR+ F S R+A W GDN + W+ L SI
Sbjct: 531 HNLYGWSQTRPTYEAVQEV-TGQRGVVITRSTFPSSGRWAGHWLGDNTAAWDQLKKSI 587
>pdb|1WE5|A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|B Chain B, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|C Chain C, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|D Chain D, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|E Chain E, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|F Chain F, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
Length = 772
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 30 DCSASDRQAAYPSLSFVNGKDRDTPISTRTRPSYTPTYQCVRGQQIVKLEFPAGTSLYGT 89
+ SA + + SL F+ +R T + Y R +L+ G ++YG
Sbjct: 107 NLSARVSKGEFWSLDFLRNGERITGSQVKNN-GYVQDTNNQRNYXFERLDLGVGETVYGL 165
Query: 90 GEVSGQLERTGKRIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRC-- 147
GE L R G+ + TWN D GT T Y++ P+ GVL + +C
Sbjct: 166 GERFTALVRNGQTVETWNRDG---GTSTEQAYKNIPFYXT----NRGYGVLVNHP-QCVS 217
Query: 148 -EIDLRKESTIQFIAPSSYPVFTFGPFTSPTAVL 180
E+ K S +QF S Y + +P AVL
Sbjct: 218 FEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVL 251
>pdb|4B9Y|A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In
Glycoside Hydrolase Family 31
pdb|4B9Z|A Chain A, Crystal Structure Of Agd31b, Alpha-transglucosylase,
Complexed With Acarbose
pdb|4BA0|A Chain A, Crystal Structure Of Agd31b, Alpha-transglucosylase,
Complexed With 5f-alpha-glcf
Length = 817
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 185 HAVYGMLMARSTYEGMKLADKDKRPFVLTRAGFIGSQRYAAT-WTGDNVSNWEHLHMSIS 243
H YG A Y+ + RPF++ RAGF+GSQRY WTGD W L +
Sbjct: 434 HNAYGHRWAEMLYQQQLDQFPELRPFIMMRAGFVGSQRYGMIPWTGDVSRTWGGLASQVE 493
Query: 244 M 244
+
Sbjct: 494 L 494
>pdb|2X2H|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2I|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2J|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
Length = 1027
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 205 KDKRPFVLTRAGFIGSQRYAATWTGDNVSNWEHLHMSIS 243
K +R ++++R G+IG+Q + W GDN + ++ M I+
Sbjct: 629 KFRRSYIISRGGYIGNQHFGGMWVGDNSTTSNYIQMMIA 667
>pdb|2WBV|A Chain A, Canine Adenovirus 2 Fibre Head In Complex With Sialic Acid
pdb|2WBV|B Chain B, Canine Adenovirus 2 Fibre Head In Complex With Sialic Acid
pdb|2WBV|C Chain C, Canine Adenovirus 2 Fibre Head In Complex With Sialic Acid
pdb|2WBV|D Chain D, Canine Adenovirus 2 Fibre Head In Complex With Sialic Acid
pdb|2WBV|E Chain E, Canine Adenovirus 2 Fibre Head In Complex With Sialic Acid
pdb|2WBV|F Chain F, Canine Adenovirus 2 Fibre Head In Complex With Sialic Acid
Length = 189
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Query: 94 GQLERTGK--RIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEID 150
GQL TG TW WG T SH W L +PN E A T RC +D
Sbjct: 75 GQLMSTGNINSTTTWGEKPWG--NNTVQPRPSHTWKLC-MPNREVYSTPAATISRCGLD 130
>pdb|2J1K|C Chain C, Cav-2 Fibre Head In Complex With Car D1
pdb|2J1K|D Chain D, Cav-2 Fibre Head In Complex With Car D1
pdb|2J1K|E Chain E, Cav-2 Fibre Head In Complex With Car D1
pdb|2J1K|F Chain F, Cav-2 Fibre Head In Complex With Car D1
pdb|2J1K|H Chain H, Cav-2 Fibre Head In Complex With Car D1
pdb|2J1K|I Chain I, Cav-2 Fibre Head In Complex With Car D1
pdb|2J1K|L Chain L, Cav-2 Fibre Head In Complex With Car D1
pdb|2J1K|M Chain M, Cav-2 Fibre Head In Complex With Car D1
pdb|2J1K|N Chain N, Cav-2 Fibre Head In Complex With Car D1
pdb|2J1K|Q Chain Q, Cav-2 Fibre Head In Complex With Car D1
pdb|2J1K|R Chain R, Cav-2 Fibre Head In Complex With Car D1
pdb|2J1K|S Chain S, Cav-2 Fibre Head In Complex With Car D1
pdb|2J2J|A Chain A, Canine Adenovirus Fibre Head At 1.5 A Resolution
pdb|2J2J|B Chain B, Canine Adenovirus Fibre Head At 1.5 A Resolution
pdb|2J2J|C Chain C, Canine Adenovirus Fibre Head At 1.5 A Resolution
pdb|2J2J|D Chain D, Canine Adenovirus Fibre Head At 1.5 A Resolution
pdb|2J2J|E Chain E, Canine Adenovirus Fibre Head At 1.5 A Resolution
pdb|2J2J|F Chain F, Canine Adenovirus Fibre Head At 1.5 A Resolution
pdb|2W9L|C Chain C, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
pdb|2W9L|D Chain D, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
pdb|2W9L|E Chain E, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
pdb|2W9L|F Chain F, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
pdb|2W9L|H Chain H, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
pdb|2W9L|I Chain I, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
pdb|2W9L|L Chain L, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
pdb|2W9L|M Chain M, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
pdb|2W9L|N Chain N, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
pdb|2W9L|Q Chain Q, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
pdb|2W9L|R Chain R, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
pdb|2W9L|S Chain S, Canine Adenovirus Type 2 Fibre Head In Complex With Car
Domain D1 And Sialic Acid
Length = 197
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Query: 94 GQLERTGK--RIFTWNTDAWGYGTGTTSLYQSHPWVLAVLPNGEALGVLADTTRRCEID 150
GQL TG TW WG T SH W L +PN E A T RC +D
Sbjct: 83 GQLMSTGNINSTTTWGEKPWG--NNTVQPRPSHTWKLC-MPNREVYSTPAATISRCGLD 138
>pdb|3RBG|A Chain A, Crystal Structure Analysis Of Class-I Mhc Restricted
T-Cell Associated Molecule
pdb|3RBG|B Chain B, Crystal Structure Analysis Of Class-I Mhc Restricted
T-Cell Associated Molecule
pdb|3RBG|C Chain C, Crystal Structure Analysis Of Class-I Mhc Restricted
T-Cell Associated Molecule
pdb|3RBG|D Chain D, Crystal Structure Analysis Of Class-I Mhc Restricted
T-Cell Associated Molecule
Length = 124
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 144 TRRCEIDLRKESTIQFIAPSSYPVF 168
T +C LRK S++Q++ PS + +F
Sbjct: 20 TLKCVTSLRKNSSLQWLTPSGFTIF 44
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,055,982
Number of Sequences: 62578
Number of extensions: 334412
Number of successful extensions: 884
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 860
Number of HSP's gapped (non-prelim): 29
length of query: 269
length of database: 14,973,337
effective HSP length: 97
effective length of query: 172
effective length of database: 8,903,271
effective search space: 1531362612
effective search space used: 1531362612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)