Query 024314
Match_columns 269
No_of_seqs 124 out of 224
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 06:06:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024314.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024314hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1upk_A MO25 protein; transfera 100.0 4E-104 1E-108 743.4 24.8 264 2-268 2-265 (341)
2 4db8_A Armadillo-repeat protei 95.9 0.083 2.8E-06 44.2 11.2 182 75-267 48-232 (252)
3 4hxt_A De novo protein OR329; 95.9 0.44 1.5E-05 39.2 15.4 162 76-245 81-245 (252)
4 4db6_A Armadillo repeat protei 95.8 0.42 1.4E-05 38.8 15.0 179 41-240 27-208 (210)
5 1xqr_A HSPBP1 protein; armadil 95.6 0.63 2.2E-05 42.0 16.4 162 73-242 73-239 (296)
6 4hxt_A De novo protein OR329; 95.5 0.84 2.9E-05 37.4 20.4 183 74-267 37-222 (252)
7 4db8_A Armadillo-repeat protei 94.8 1.2 4.1E-05 37.0 14.8 156 77-240 92-250 (252)
8 2jdq_A Importin alpha-1 subuni 94.1 2.2 7.6E-05 38.2 16.0 156 77-241 145-305 (450)
9 1wa5_B Importin alpha subunit; 93.1 2.7 9.2E-05 39.4 15.2 178 78-266 212-392 (530)
10 4db6_A Armadillo repeat protei 93.0 0.86 2.9E-05 36.9 10.3 151 84-242 15-168 (210)
11 2jdq_A Importin alpha-1 subuni 92.4 1.8 6.1E-05 38.9 12.5 162 76-243 271-445 (450)
12 4b8j_A Importin subunit alpha- 91.9 2.5 8.5E-05 39.5 13.3 161 75-243 322-498 (528)
13 4fdd_A Transportin-1; heat rep 90.2 12 0.0004 37.4 17.0 153 84-253 93-254 (852)
14 1wa5_B Importin alpha subunit; 90.0 2.2 7.4E-05 40.1 10.9 155 80-242 256-413 (530)
15 2z6g_A B-catenin; FULL-length, 89.2 15 0.00053 36.8 17.1 155 79-241 148-305 (780)
16 4b8j_A Importin subunit alpha- 89.1 8.2 0.00028 35.9 14.1 155 78-241 199-358 (528)
17 1jdh_A Beta-catenin; beta-cate 85.3 22 0.00075 32.4 15.0 155 79-241 15-172 (529)
18 1u6g_C TIP120 protein, CAND1; 85.3 8.1 0.00028 40.2 12.7 149 82-243 49-206 (1230)
19 3tpo_A Importin subunit alpha- 83.8 24 0.00082 33.2 14.4 158 75-240 287-448 (529)
20 1upk_A MO25 protein; transfera 83.4 18 0.0006 33.9 12.8 140 72-214 155-303 (341)
21 2z6h_A Catenin beta-1, beta-ca 83.3 33 0.0011 33.1 15.4 159 77-244 348-530 (644)
22 2x19_B Importin-13; nuclear tr 82.8 33 0.0011 34.4 15.6 151 95-254 699-859 (963)
23 1qgr_A Protein (importin beta 82.0 18 0.00062 35.3 13.0 152 81-241 128-288 (876)
24 3tpo_A Importin subunit alpha- 81.5 36 0.0012 32.0 19.4 176 81-267 251-430 (529)
25 2z6h_A Catenin beta-1, beta-ca 80.7 42 0.0014 32.3 15.6 156 78-241 11-169 (644)
26 3nmw_A APC variant protein; AR 80.6 12 0.00041 34.3 10.7 163 77-246 166-339 (354)
27 3ul1_B Importin subunit alpha- 80.1 40 0.0014 31.7 18.4 176 81-267 232-411 (510)
28 2z6g_A B-catenin; FULL-length, 79.1 32 0.0011 34.5 14.0 160 76-244 483-666 (780)
29 4fdd_A Transportin-1; heat rep 78.9 12 0.0004 37.3 10.7 154 81-242 128-286 (852)
30 2qk2_A LP04448P; mini spindles 78.0 13 0.00044 31.0 9.2 152 92-259 68-222 (242)
31 3grl_A General vesicular trans 77.5 37 0.0013 34.4 13.7 151 46-199 79-244 (651)
32 3nmz_A APC variant protein; pr 76.0 29 0.00098 33.1 12.1 162 76-244 281-453 (458)
33 3qml_C Protein SLS1, nucleotid 76.0 21 0.00071 33.1 10.6 59 70-136 62-122 (315)
34 1ibr_B P95, importin beta-1 su 75.0 19 0.00066 31.9 10.0 152 81-241 128-288 (462)
35 1jdh_A Beta-catenin; beta-cate 72.9 26 0.0009 31.9 10.6 153 79-241 141-295 (529)
36 2bpt_A Importin beta-1 subunit 72.6 72 0.0025 30.9 14.3 155 81-242 134-296 (861)
37 1xm9_A Plakophilin 1; armadill 70.7 60 0.0021 30.0 12.7 144 40-199 298-451 (457)
38 3ul1_B Importin subunit alpha- 69.8 73 0.0025 29.8 13.5 158 75-240 268-429 (510)
39 2qk2_A LP04448P; mini spindles 68.9 48 0.0017 27.4 11.7 137 86-242 20-163 (242)
40 1w63_A Adapter-related protein 65.4 86 0.0029 30.3 13.0 46 175-221 187-232 (618)
41 3now_A UNC-45 protein, SD10334 65.1 1.3E+02 0.0045 31.0 16.5 185 70-268 484-676 (810)
42 1qgr_A Protein (importin beta 63.7 23 0.00079 34.5 8.6 143 93-241 49-203 (876)
43 3dad_A FH1/FH2 domain-containi 59.5 1.1E+02 0.0039 28.4 15.0 156 13-196 115-286 (339)
44 1wa5_C Importin alpha RE-expor 55.9 1.2E+02 0.0041 30.7 12.6 103 92-199 48-155 (960)
45 2bpt_A Importin beta-1 subunit 55.8 1.5E+02 0.0051 28.6 16.8 145 82-241 225-398 (861)
46 3now_A UNC-45 protein, SD10334 55.2 73 0.0025 32.9 10.9 189 74-267 529-760 (810)
47 2x1g_F Cadmus; transport prote 51.3 1.6E+02 0.0053 29.7 12.5 150 94-253 706-870 (971)
48 1xqr_A HSPBP1 protein; armadil 48.0 1.5E+02 0.005 26.2 10.9 135 77-216 120-260 (296)
49 4hat_C Exportin-1; heat repeat 46.0 1.1E+02 0.0037 32.1 10.6 87 138-224 816-911 (1023)
50 2prs_A High-affinity zinc upta 40.4 67 0.0023 28.2 7.0 71 11-81 122-223 (284)
51 2bnx_A Diaphanous protein homo 39.2 1.4E+02 0.0049 27.5 9.4 24 118-141 90-113 (386)
52 1eyh_A Epsin; superhelix of he 38.6 72 0.0025 25.9 6.3 95 62-166 18-123 (144)
53 1oxz_A ADP-ribosylation factor 38.5 1.1E+02 0.0037 26.1 7.7 15 44-58 79-93 (186)
54 3gi1_A LBP, laminin-binding pr 38.3 68 0.0023 28.4 6.7 71 11-81 127-228 (286)
55 1xm9_A Plakophilin 1; armadill 38.3 1.4E+02 0.0047 27.5 9.1 116 127-247 5-122 (457)
56 2yru_A Steroid receptor RNA ac 38.0 48 0.0017 26.2 5.0 45 40-84 35-79 (118)
57 2qk1_A Protein STU2; STU2P, XM 37.8 76 0.0026 27.1 6.8 138 91-242 26-176 (249)
58 2o1e_A YCDH; alpha-beta protei 36.8 58 0.002 29.3 6.0 71 11-81 138-239 (312)
59 3onk_A Epsin-3, ENT3; helix, p 35.2 77 0.0026 26.0 6.0 101 60-166 22-130 (150)
60 3cx3_A Lipoprotein; zinc-bindi 34.2 77 0.0026 27.8 6.4 72 11-82 125-227 (284)
61 1xgw_A Epsin 4; ENTH, enthopro 32.9 75 0.0026 26.8 5.7 102 61-166 46-153 (176)
62 2k7r_A Primosomal protein DNAI 32.8 41 0.0014 25.6 3.8 42 155-218 20-62 (106)
63 3ujp_A Mn transporter subunit; 32.7 1.3E+02 0.0045 27.0 7.7 72 11-82 136-240 (307)
64 1vdy_A Hypothetical protein (R 32.4 1.1E+02 0.0039 24.7 6.5 96 64-164 26-129 (140)
65 1ibr_B P95, importin beta-1 su 32.3 2.5E+02 0.0087 24.4 15.1 107 126-242 126-247 (462)
66 1pq4_A Periplasmic binding pro 31.1 1E+02 0.0035 27.2 6.7 71 11-81 138-237 (291)
67 1inz_A EPS15-interacting porte 30.9 45 0.0015 27.3 3.9 90 62-161 36-136 (148)
68 3hh8_A Metal ABC transporter s 29.3 1.2E+02 0.0042 26.8 6.9 72 11-82 129-233 (294)
69 3mfq_A TROA, high-affinity zin 29.0 1.3E+02 0.0044 26.4 6.9 71 11-81 109-212 (282)
70 3gjx_A Exportin-1; transport, 28.2 1.6E+02 0.0054 31.3 8.4 86 138-225 842-936 (1073)
71 1toa_A Tromp-1, protein (perip 27.5 1.3E+02 0.0045 26.9 6.8 71 11-81 143-246 (313)
72 1xvl_A Mn transporter, MNTC pr 24.9 1.6E+02 0.0055 26.4 6.9 71 11-81 150-253 (321)
73 2vgl_B AP-2 complex subunit be 24.3 4.6E+02 0.016 24.8 10.9 137 82-244 50-192 (591)
74 1u6g_C TIP120 protein, CAND1; 22.9 6.3E+02 0.022 25.9 13.0 148 82-241 435-598 (1230)
75 1b3u_A Protein (protein phosph 20.9 4.6E+02 0.016 23.6 12.4 142 80-241 401-548 (588)
76 1f6f_A Placental lactogen; 4-h 20.2 1.1E+02 0.0036 26.2 4.4 78 188-269 15-93 (199)
No 1
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=100.00 E-value=3.7e-104 Score=743.36 Aligned_cols=264 Identities=45% Similarity=0.722 Sum_probs=241.3
Q ss_pred CccCCCCCCCCChHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhhc
Q 024314 2 SFSFFKPSRPKTPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKED 81 (269)
Q Consensus 2 sflf~~~~r~ktP~e~Vr~~~e~l~~l~~~~~~~~~~~~k~~ee~~K~L~~mK~il~G~~e~ep~~e~~~qL~~ei~~~d 81 (269)
++-||++ ||||+|+||+++|+|.+|+.++. .+++.+|++|||+|+|++||.||||++|+||+||+|+||++|+|++|
T Consensus 2 ~m~F~~~--~ktP~elVr~l~d~l~~l~~~~~-~~~~~~k~~ee~sK~l~~mK~iL~G~~e~ep~~e~~~qL~~ei~~~d 78 (341)
T 1upk_A 2 PFPFGKS--HKSPADIVKNLKESMAVLEKQDI-SDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSG 78 (341)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHC----CTHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHS
T ss_pred CCCCCCC--CCCHHHHHHHHHHHHHHHhcccc-ccchhhHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhC
Confidence 3338877 99999999999999999986431 22344789999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhccCcchhhhhhHHHHHHhhhHHHHH
Q 024314 82 VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLAR 161 (269)
Q Consensus 82 ll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~~~dial~~G~mLREcik~e~la~ 161 (269)
++++||.+||+||||+||||++||++++|+++|+++|+|+||++||||+++|++||++||+|++||+|||||||||++|+
T Consensus 79 ll~~Li~~l~~L~fE~RKd~~~if~~llr~~~~~~~p~v~Yl~~~peil~~L~~gYe~~diAl~~G~mLRecir~e~la~ 158 (341)
T 1upk_A 79 LLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAK 158 (341)
T ss_dssp HHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTTHHHHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHhcccCCchhhccHHHHHHHHHhcccCCCCchhHHHHcCHHHHHHHHHhhccchhHhHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhhhHHhhc
Q 024314 162 YILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLL 241 (269)
Q Consensus 162 ~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKLLgelLl 241 (269)
+||+|++||+||+|++.|+||||||||+||||+||+||++||+||++|||+||++||+||+|+||||||||||||||||+
T Consensus 159 ~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~Hk~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlKLLgelLl 238 (341)
T 1upk_A 159 IILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLL 238 (341)
T ss_dssp HHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhccHHHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhhCChhhHHHHHHhccc
Q 024314 242 EPPNSHIMKRYILEVRFLKVMMTLLKV 268 (269)
Q Consensus 242 dr~N~~vM~rYis~~~NLkl~M~LLr~ 268 (269)
||+|++||+|||+|++|||+|||||||
T Consensus 239 dr~N~~vM~~Yis~~~nLkl~M~LL~d 265 (341)
T 1upk_A 239 DRHNFTIMTKYISKPENLKLMMNLLRD 265 (341)
T ss_dssp SGGGHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred CchHHHHHHHHhCCHHHHHHHHHHhcC
Confidence 999999999999999999999999997
No 2
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=95.90 E-value=0.083 Score=44.22 Aligned_cols=182 Identities=14% Similarity=0.119 Sum_probs=126.1
Q ss_pred HHHHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhc--cCcchhhhhhHHHHH
Q 024314 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRE 152 (269)
Q Consensus 75 ~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY--~~~dial~~G~mLRE 152 (269)
..+...+.+..|+..|..=+-+.|..++.+..++.....+. .+.+.. ...+..|+.-- +++++--.+-..|..
T Consensus 48 ~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~----~~~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~ 122 (252)
T 4db8_A 48 QAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQ----IQAVID-AGALPALVQLLSSPNEQILQEALWALSN 122 (252)
T ss_dssp HHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHH----HHHHHH-TTHHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHH----HHHHHH-cCCHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 45667789999999998888888999988888887533221 222222 23444444433 345666677777777
Q ss_pred HhhhHHHH-HHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhc
Q 024314 153 CIKFPSLA-RYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQ 231 (269)
Q Consensus 153 cik~e~la-~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQ 231 (269)
....+... ..+.....+..+.+.++.++-++...|..++..+-............. ..+...-++|.+++--++..
T Consensus 123 l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~---~~i~~L~~ll~~~~~~v~~~ 199 (252)
T 4db8_A 123 IASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA---GALPALVQLLSSPNEQILQE 199 (252)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---TCHHHHHHGGGCSSHHHHHH
T ss_pred hhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHC---CCHHHHHHHHCCCCHHHHHH
Confidence 77776666 777778888888999999999999999999999887665554444443 35667778999999999999
Q ss_pred hhhhhHHhhcCCCCHHHHHHhhCChhhHHHHHHhcc
Q 024314 232 SLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLK 267 (269)
Q Consensus 232 SLKLLgelLldr~N~~vM~rYis~~~NLkl~M~LLr 267 (269)
++..|+.+.. .+-... ..+-+..-+..++.+|+
T Consensus 200 a~~~L~~l~~--~~~~~~-~~~~~~g~i~~L~~ll~ 232 (252)
T 4db8_A 200 ALWALSNIAS--GGNEQK-QAVKEAGALEKLEQLQS 232 (252)
T ss_dssp HHHHHHHHTT--SCHHHH-HHHHHTTHHHHHHTTTT
T ss_pred HHHHHHHHhc--CCHHHH-HHHHHCCcHHHHHHHhC
Confidence 9999999984 222222 22223345555555554
No 3
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=95.87 E-value=0.44 Score=39.18 Aligned_cols=162 Identities=14% Similarity=0.165 Sum_probs=120.8
Q ss_pred HHHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhcc--CcchhhhhhHHHHHH
Q 024314 76 EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCGIMLREC 153 (269)
Q Consensus 76 ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~--~~dial~~G~mLREc 153 (269)
.+.+.+.+..|+..|..=+-+.|..+..+..++...... ..+.+.. ...+..|+..-. ++++...+-..|...
T Consensus 81 ~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~----~~~~~~~-~~~i~~L~~~l~~~~~~~~~~a~~~L~~l 155 (252)
T 4hxt_A 81 AIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDE----AIKAIVD-AGGVEVLVKLLTSTDSEVQKEAARALANI 155 (252)
T ss_dssp HHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHH----HHHHHHH-CCCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 344557899999999888888899998888888753321 1122222 344555544443 456777777777777
Q ss_pred hh-hHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhch
Q 024314 154 IK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQS 232 (269)
Q Consensus 154 ik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQS 232 (269)
.. .+...+.+.....+..+.+.+..++-++...|..++..+...++.....+...+ .+...-+++.+++.-+++++
T Consensus 156 ~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~---~i~~L~~ll~~~~~~v~~~a 232 (252)
T 4hxt_A 156 ASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVDAG---GVEVLQKLLTSTDSEVQKEA 232 (252)
T ss_dssp TTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTT---HHHHHHHGGGCSCHHHHHHH
T ss_pred HcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCC---CHHHHHHHHCCCcHHHHHHH
Confidence 76 456667788888888999999999999999999999999886666666666544 77788889999999999999
Q ss_pred hhhhHHhhcCCCC
Q 024314 233 LKLLSEFLLEPPN 245 (269)
Q Consensus 233 LKLLgelLldr~N 245 (269)
+..|+.|.-...+
T Consensus 233 ~~~L~~l~~~~~~ 245 (252)
T 4hxt_A 233 QRALENIKSGGWL 245 (252)
T ss_dssp HHHHHHHHHTCBC
T ss_pred HHHHHHHHcCCCc
Confidence 9999998765543
No 4
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=95.83 E-value=0.42 Score=38.77 Aligned_cols=179 Identities=12% Similarity=0.130 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchh
Q 024314 41 KAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCV 120 (269)
Q Consensus 41 k~~ee~~K~L~~mK~il~G~~e~ep~~e~~~qL~~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v 120 (269)
..+.+....|..+- .|+ ++ ....+...+.+..|+..|..=+-+.|..+.....++...... ..
T Consensus 27 ~v~~~a~~~L~~l~---~~~------~~----~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~----~~ 89 (210)
T 4db6_A 27 QELQSALRKLSQIA---SGG------NE----QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNE----QI 89 (210)
T ss_dssp HHHHHHHHHHHHHH---TSC------HH----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH----HH
T ss_pred HHHHHHHHHHHHHH---cCC------HH----HHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcH----HH
Confidence 44556666665553 222 22 334566778999999999888889999999998888743321 11
Q ss_pred hhhhccHHHHHHHHHhcc--CcchhhhhhHHHHHHhh-hHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhc
Q 024314 121 QFIENHFELLDFLVVCYD--NKEVALHCGIMLRECIK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTK 197 (269)
Q Consensus 121 ~Yl~~~peil~~L~~gY~--~~dial~~G~mLREcik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~ 197 (269)
+.+. ....+..|+.--+ ++++.-.+-..|..... .+...+.++....+..+.+.++.++-++...|...+..+...
T Consensus 90 ~~i~-~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~ 168 (210)
T 4db6_A 90 QAVI-DAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG 168 (210)
T ss_dssp HHHH-HTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTS
T ss_pred HHHH-HCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 2222 2223333333322 45555566666666664 455566777788888999999999999999999999999887
Q ss_pred chhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhhhHHhh
Q 024314 198 HLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFL 240 (269)
Q Consensus 198 Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKLLgelL 240 (269)
++.....+...+ .+...-+++.+++.-++++++..|+.|-
T Consensus 169 ~~~~~~~~~~~g---~i~~L~~ll~~~~~~v~~~a~~aL~~l~ 208 (210)
T 4db6_A 169 GNEQKQAVKEAG---ALEKLEQLQSHENEKIQKEAQEALEKLQ 208 (210)
T ss_dssp CHHHHHHHHHTT---HHHHHHHGGGCSCHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHCC---CHHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 666665555554 6777888999999999999999998763
No 5
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=95.56 E-value=0.63 Score=41.99 Aligned_cols=162 Identities=12% Similarity=0.064 Sum_probs=112.3
Q ss_pred HHHHHHhhcHHHHHHh-hCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhcc---HHHHHHHHHhccCcchhhhhhH
Q 024314 73 LATEVCKEDVLILLVH-KLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENH---FELLDFLVVCYDNKEVALHCGI 148 (269)
Q Consensus 73 L~~ei~~~dll~~Li~-~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~---peil~~L~~gY~~~dial~~G~ 148 (269)
-++.+.+.+-+..|+. .|..=+-+.|..++.+.+++...... .-+.+... |-++..|-.+. ++++.-.+-.
T Consensus 73 na~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~----~~~~vv~~g~l~~Ll~LL~~~~-~~~v~~~A~~ 147 (296)
T 1xqr_A 73 NAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAA----IQEQVLGLGALRKLLRLLDRDA-CDTVRVKALF 147 (296)
T ss_dssp HHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHH----HHHHHHHTTHHHHHHHHHHHCS-CHHHHHHHHH
T ss_pred hHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHH----HHHHHHHCCCHHHHHHHHccCC-CHHHHHHHHH
Confidence 4556777788888999 89888889999999999998753211 11233331 44444443221 2333333333
Q ss_pred HHHHHhhh-HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCcc
Q 024314 149 MLRECIKF-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYV 227 (269)
Q Consensus 149 mLREcik~-e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYV 227 (269)
-|--++++ ......+.....+--+.+.++.+++++-.+|...+..+...+......+.+.+ ++...-.||.+++--
T Consensus 148 ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g---~i~~Lv~LL~~~d~~ 224 (296)
T 1xqr_A 148 AISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMG---MVQQLVALVRTEHSP 224 (296)
T ss_dssp HHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTT---HHHHHHHHHTSCCST
T ss_pred HHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcC---CHHHHHHHHcCCChh
Confidence 33333443 44444455556666777778889999999999999998887676666766665 667777899999999
Q ss_pred chhchhhhhHHhhcC
Q 024314 228 TRRQSLKLLSEFLLE 242 (269)
Q Consensus 228 TkRQSLKLLgelLld 242 (269)
++.+++..|+.|+.+
T Consensus 225 v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 225 FHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999999976
No 6
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=95.50 E-value=0.84 Score=37.43 Aligned_cols=183 Identities=15% Similarity=0.181 Sum_probs=130.2
Q ss_pred HHHHHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhc--cCcchhhhhhHHHH
Q 024314 74 ATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLR 151 (269)
Q Consensus 74 ~~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY--~~~dial~~G~mLR 151 (269)
...+.+.+.+..|+..|..=+-+.|..++.+..++.....+ ..+.+.. ...+..|+.-- +++++.-.+-..|.
T Consensus 37 ~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~----~~~~~~~-~~~i~~l~~ll~~~~~~v~~~a~~~L~ 111 (252)
T 4hxt_A 37 IKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDE----AIKAIVD-AGGVEVLVKLLTSTDSEVQKEAARALA 111 (252)
T ss_dssp HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHH-TTHHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChH----HHHHHHH-CCCHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 34456678899999999988888899999888888754221 2233322 23344443333 45677777888888
Q ss_pred HHh-hhHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchh
Q 024314 152 ECI-KFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRR 230 (269)
Q Consensus 152 Eci-k~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkR 230 (269)
... ..+.....+.....+..+.+.+..++-++...|..++..+-..+......+... ..+...-+++.+++--+++
T Consensus 112 ~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~---~~i~~L~~ll~~~~~~v~~ 188 (252)
T 4hxt_A 112 NIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDA---GGVEVLVKLLTSTDSEVQK 188 (252)
T ss_dssp HHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---THHHHHHHHTTCSCHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHC---cCHHHHHHHHCCCCHHHHH
Confidence 888 567788888888888899999999999999999999999877666555555553 3677778899999999999
Q ss_pred chhhhhHHhhcCCCCHHHHHHhhCChhhHHHHHHhcc
Q 024314 231 QSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLK 267 (269)
Q Consensus 231 QSLKLLgelLldr~N~~vM~rYis~~~NLkl~M~LLr 267 (269)
.++..|+.+... +-. ..+++.+..-+..++.+|+
T Consensus 189 ~a~~~L~~l~~~--~~~-~~~~l~~~~~i~~L~~ll~ 222 (252)
T 4hxt_A 189 EAARALANIASG--PTS-AIKAIVDAGGVEVLQKLLT 222 (252)
T ss_dssp HHHHHHHHHTTS--BHH-HHHHHHHTTHHHHHHHGGG
T ss_pred HHHHHHHHHHcC--CHH-HHHHHHHCCCHHHHHHHHC
Confidence 999999999862 222 2233333445555555554
No 7
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=94.77 E-value=1.2 Score=36.99 Aligned_cols=156 Identities=12% Similarity=0.099 Sum_probs=113.9
Q ss_pred HHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhcc--CcchhhhhhHHHHHHh
Q 024314 77 VCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD--NKEVALHCGIMLRECI 154 (269)
Q Consensus 77 i~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~--~~dial~~G~mLREci 154 (269)
+...+.+..|+..|..=+-+.|..++....++..... ...+.+. ...++..|+..-. ++++...+-..|....
T Consensus 92 i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~----~~~~~~~-~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~ 166 (252)
T 4db8_A 92 VIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN----EQIQAVI-DAGALPALVQLLSSPNEQILQEALWALSNIA 166 (252)
T ss_dssp HHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH----HHHHHHH-HTTHHHHHHHGGGCSCHHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCc----hHHHHHH-HCCCHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 4456788899999988788899999988888854221 1113332 2344555544433 4456666666666666
Q ss_pred h-hHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchh
Q 024314 155 K-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSL 233 (269)
Q Consensus 155 k-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSL 233 (269)
. .+.....+.....+..+.+.+..++-++...|..++..+...++.....++..+ .+...-+++.+++.-+|+.+.
T Consensus 167 ~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g---~i~~L~~ll~~~~~~v~~~A~ 243 (252)
T 4db8_A 167 SGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAG---ALEKLEQLQSHENEKIQKEAQ 243 (252)
T ss_dssp TSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---HHHHHHTTTTCSSSHHHHTHH
T ss_pred cCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCC---cHHHHHHHhCCCCHHHHHHHH
Confidence 5 355666677777888999999999999999999999999877776666666553 677788899999999999999
Q ss_pred hhhHHhh
Q 024314 234 KLLSEFL 240 (269)
Q Consensus 234 KLLgelL 240 (269)
..|+.|-
T Consensus 244 ~~L~~l~ 250 (252)
T 4db8_A 244 EALEKLQ 250 (252)
T ss_dssp HHHHTTC
T ss_pred HHHHHHh
Confidence 9998763
No 8
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=94.12 E-value=2.2 Score=38.19 Aligned_cols=156 Identities=13% Similarity=0.111 Sum_probs=110.6
Q ss_pred HHhhcHHHHHHhhCCC-CChhhhhhHHHHHHHHhhcc-cCCccchhhhhhccHHHHHHHHHhc--cCcchhhhhhHHHHH
Q 024314 77 VCKEDVLILLVHKLPI-LGWEARKDLVHCWSILLKQK-VDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRE 152 (269)
Q Consensus 77 i~~~dll~~Li~~l~~-L~fE~RKdv~~If~~llr~~-~~~~~p~v~Yl~~~peil~~L~~gY--~~~dial~~G~mLRE 152 (269)
+...+.+..|+..+.. -+-+.|+.++..+.++.+.. ...+. ..+ ..++..|+..- +++++...+...|+.
T Consensus 145 ~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~---~~~---~~~l~~L~~~l~~~~~~v~~~a~~~L~~ 218 (450)
T 2jdq_A 145 VLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEF---AKV---SPCLNVLSWLLFVSDTDVLADACWALSY 218 (450)
T ss_dssp HHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCG---GGT---GGGHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCCCCCH---HHH---HHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 3445788889999885 67899999999999998754 22221 222 33444444333 344555566666776
Q ss_pred Hhhh-HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhc
Q 024314 153 CIKF-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQ 231 (269)
Q Consensus 153 cik~-e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQ 231 (269)
+..+ +.....+.....+..+.+.+..++-++...|..++..+.+.........+.. ......-++|.+++--+|+.
T Consensus 219 l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~---~~l~~L~~ll~~~~~~vr~~ 295 (450)
T 2jdq_A 219 LSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNC---SALQSLLHLLSSPKESIKKE 295 (450)
T ss_dssp HTSSSHHHHHHHHHTTTHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTT---THHHHHHHHTTCSSHHHHHH
T ss_pred HHCCCcHHHHHHHHcCcHHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHC---ccHHHHHHHHcCCCHHHHHH
Confidence 6664 3445556666778888888888999999999999999887665544444443 36677788999999999999
Q ss_pred hhhhhHHhhc
Q 024314 232 SLKLLSEFLL 241 (269)
Q Consensus 232 SLKLLgelLl 241 (269)
++..||.+..
T Consensus 296 a~~~L~~l~~ 305 (450)
T 2jdq_A 296 ACWTISNITA 305 (450)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHc
Confidence 9999999875
No 9
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=93.06 E-value=2.7 Score=39.44 Aligned_cols=178 Identities=10% Similarity=0.043 Sum_probs=118.6
Q ss_pred HhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHh--ccCcchhhhhhHHHHHHhh
Q 024314 78 CKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVC--YDNKEVALHCGIMLRECIK 155 (269)
Q Consensus 78 ~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~g--Y~~~dial~~G~mLREcik 155 (269)
...+.+..|+..+..-+-+.|+.++....++.+..... +..... ..++..|+.- -+++++-..+-..|..+..
T Consensus 212 ~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~--~~~~~~---~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~ 286 (530)
T 1wa5_B 212 LQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQ--PDWSVV---SQALPTLAKLIYSMDTETLVDACWAISYLSD 286 (530)
T ss_dssp HHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSC--CCHHHH---GGGHHHHHHHTTCCCHHHHHHHHHHHHHHHS
T ss_pred HHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCC--CcHHHH---HhHHHHHHHHHcCCCHHHHHHHHHHHHHHhC
Confidence 44567888888888878889999999999998754211 111111 2233333332 2345555556666666665
Q ss_pred h-HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhh
Q 024314 156 F-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLK 234 (269)
Q Consensus 156 ~-e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLK 234 (269)
. +.....++....+..+.+.+..++-++...|..++..+.+........++..+ +....-.+|.+++.-+|..++.
T Consensus 287 ~~~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~---~l~~L~~lL~~~~~~vr~~A~~ 363 (530)
T 1wa5_B 287 GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAG---VLPALRLLLSSPKENIKKEACW 363 (530)
T ss_dssp SCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---HHHHHHHHTTCSCHHHHHHHHH
T ss_pred CCHHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcc---hHHHHHHHHcCCCHHHHHHHHH
Confidence 4 44555666677788888888888889999999999988877666665665543 6667788999999999999999
Q ss_pred hhHHhhcCCCCHHHHHHhhCChhhHHHHHHhc
Q 024314 235 LLSEFLLEPPNSHIMKRYILEVRFLKVMMTLL 266 (269)
Q Consensus 235 LLgelLldr~N~~vM~rYis~~~NLkl~M~LL 266 (269)
.||.+-. .+......++ +..-+..++.+|
T Consensus 364 aL~~l~~--~~~~~~~~~~-~~~~l~~L~~lL 392 (530)
T 1wa5_B 364 TISNITA--GNTEQIQAVI-DANLIPPLVKLL 392 (530)
T ss_dssp HHHHHTT--SCHHHHHHHH-HTTCHHHHHHHH
T ss_pred HHHHHHc--CCHHHHHHHH-HCCCHHHHHHHH
Confidence 9999875 3333333333 334455555554
No 10
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=92.99 E-value=0.86 Score=36.86 Aligned_cols=151 Identities=13% Similarity=0.111 Sum_probs=105.0
Q ss_pred HHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhc--cCcchhhhhhHHHHHHhh-hHHHH
Q 024314 84 ILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRECIK-FPSLA 160 (269)
Q Consensus 84 ~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY--~~~dial~~G~mLREcik-~e~la 160 (269)
..|+.-|..=+-+.|..++....++.+...+ ..+.+.. ..++..|+.-- +++++--.+-..|..+.. .+...
T Consensus 15 ~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~----~~~~i~~-~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 89 (210)
T 4db6_A 15 PQMVQQLNSPDQQELQSALRKLSQIASGGNE----QIQAVID-AGALPALVQLLSSPNEQILQEALWALSNIASGGNEQI 89 (210)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHTSCHH----HHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHcCCHH----HHHHHHH-cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHH
Confidence 3444555555677888888877777643322 1122222 13333333332 255666666777777764 56666
Q ss_pred HHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhhhHHhh
Q 024314 161 RYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFL 240 (269)
Q Consensus 161 ~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKLLgelL 240 (269)
..+.....+..+.+.++.++-++...|..++..+-...+......+.. ..+...-+++.+++.-+++.++..|+.+.
T Consensus 90 ~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~---~~i~~L~~ll~~~~~~v~~~a~~aL~~l~ 166 (210)
T 4db6_A 90 QAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA---GALPALVQLLSSPNEQILQEALWALSNIA 166 (210)
T ss_dssp HHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---THHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHc---CcHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 777777788889999999999999999999999887666655555544 36777788999999999999999999998
Q ss_pred cC
Q 024314 241 LE 242 (269)
Q Consensus 241 ld 242 (269)
..
T Consensus 167 ~~ 168 (210)
T 4db6_A 167 SG 168 (210)
T ss_dssp TS
T ss_pred cC
Confidence 75
No 11
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=92.42 E-value=1.8 Score=38.86 Aligned_cols=162 Identities=12% Similarity=0.118 Sum_probs=105.1
Q ss_pred HHHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhc-c--HHHHHHHHHhccCcchhhhhhHHHHH
Q 024314 76 EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN-H--FELLDFLVVCYDNKEVALHCGIMLRE 152 (269)
Q Consensus 76 ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~-~--peil~~L~~gY~~~dial~~G~mLRE 152 (269)
.+...+.+..|+..+..=+.+.|+.+....+++..... ...+.+.. . |-++..|-. +++++-..+-..|..
T Consensus 271 ~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~~~----~~~~~~~~~~~l~~L~~~l~~--~~~~v~~~a~~~L~~ 344 (450)
T 2jdq_A 271 VILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNR----AQIQTVIDANIFPALISILQT--AEFRTRKEAAWAITN 344 (450)
T ss_dssp HHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCH----HHHHHHHHTTHHHHHHHHHHH--SCHHHHHHHHHHHHH
T ss_pred HHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCH----HHHHHHHHCCCHHHHHHHHhc--CCHHHHHHHHHHHHH
Confidence 35556788899999988788899999999988875221 12222222 1 334444332 345555555555655
Q ss_pred Hhhh--HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHH--HHHhhHHHH------HHHHHhhhc
Q 024314 153 CIKF--PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSE--YLTAHYDEF------FDLYEKLLT 222 (269)
Q Consensus 153 cik~--e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvae--fl~~Nyd~F------f~~yn~Ll~ 222 (269)
+..+ +...+.++....+..+.+.++.++.+|-..|...+..++.....-... --..+|-.. ......|+.
T Consensus 345 l~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~ 424 (450)
T 2jdq_A 345 ATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQS 424 (450)
T ss_dssp HHHHCCHHHHHHHHHHTCHHHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCHHHHHHHHHHCHHHHHHHHC
T ss_pred HHcCCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHhchhhhhccccchhHHHHHHHHcCcHHHHHHHHc
Confidence 5543 345556667778888889999899999888888888877643321100 000112222 355678999
Q ss_pred CCCccchhchhhhhHHhhcCC
Q 024314 223 SSNYVTRRQSLKLLSEFLLEP 243 (269)
Q Consensus 223 s~NYVTkRQSLKLLgelLldr 243 (269)
++||-.+.+++.+|+.+.-+.
T Consensus 425 ~~~~~v~~~a~~~l~~~~~~~ 445 (450)
T 2jdq_A 425 HENQEIYQKAFDLIEHYFGTE 445 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCHHHHHHHHHHHHHHCCcc
Confidence 999999999999999887554
No 12
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=91.92 E-value=2.5 Score=39.47 Aligned_cols=161 Identities=13% Similarity=0.174 Sum_probs=111.4
Q ss_pred HHHHhhcHHHHHHhhCCCC-ChhhhhhHHHHHHHHhhcccCCccchhhhhhcc---HHHHHHHHHhccCcchhhhhhHHH
Q 024314 75 TEVCKEDVLILLVHKLPIL-GWEARKDLVHCWSILLKQKVDSTYCCVQFIENH---FELLDFLVVCYDNKEVALHCGIML 150 (269)
Q Consensus 75 ~ei~~~dll~~Li~~l~~L-~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~---peil~~L~~gY~~~dial~~G~mL 150 (269)
+.+.+.+.+..|+..|..= +.+.|+.++.+.+++.... ...+.++... |-++..|-.+ ++++-..+-..|
T Consensus 322 ~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~----~~~~~~~~~~~~i~~L~~lL~~~--~~~v~~~a~~aL 395 (528)
T 4b8j_A 322 QCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGN----KDQIQAVINAGIIGPLVNLLQTA--EFDIKKEAAWAI 395 (528)
T ss_dssp HHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSC----HHHHHHHHHTTCHHHHHHHHHHS--CHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCC----HHHHHHHHHCCCHHHHHHHHhcC--CHHHHHHHHHHH
Confidence 3456677888888888776 8889999999999987521 1234454432 5566655544 566666666666
Q ss_pred HHHhhh--HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchh----------hHHHHHHhhHHHHHHHHH
Q 024314 151 RECIKF--PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLT----------VVSEYLTAHYDEFFDLYE 218 (269)
Q Consensus 151 REcik~--e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~----------lvaefl~~Nyd~Ff~~yn 218 (269)
..+..+ +...+++.....+..+.+.+..++-++-.-|...+..++..... ..++.+... ...+...
T Consensus 396 ~nl~~~~~~~~~~~l~~~~~i~~L~~lL~~~d~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~l~ 473 (528)
T 4b8j_A 396 SNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEA--EGLEKIE 473 (528)
T ss_dssp HHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHT--THHHHHH
T ss_pred HHHHcCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHC--CcHHHHH
Confidence 666665 56777787888888999999988888888888888888764433 122222221 1345667
Q ss_pred hhhcCCCccchhchhhhhHHhhcCC
Q 024314 219 KLLTSSNYVTRRQSLKLLSEFLLEP 243 (269)
Q Consensus 219 ~Ll~s~NYVTkRQSLKLLgelLldr 243 (269)
.|..++|.-.+..+.++|..+.-.-
T Consensus 474 ~L~~~~~~~v~~~a~~il~~~~~~e 498 (528)
T 4b8j_A 474 NLQSHDNNEIYEKAVKILEAYWMDE 498 (528)
T ss_dssp HGGGCSSHHHHHHHHHHHHHHCC--
T ss_pred HHHcCCCHHHHHHHHHHHHHHCCCc
Confidence 8899999999999999988776543
No 13
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=90.20 E-value=12 Score=37.37 Aligned_cols=153 Identities=14% Similarity=0.112 Sum_probs=93.9
Q ss_pred HHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhccCcchhhhhhH------HHHHHhhhH
Q 024314 84 ILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEVALHCGI------MLRECIKFP 157 (269)
Q Consensus 84 ~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~~~dial~~G~------mLREcik~e 157 (269)
..++..|..=+-..|+.++.+.+.+.+... -..-|+++..|+..-.+++...--|. +..++- .
T Consensus 93 ~~ll~~l~~~~~~vr~~~a~~i~~ia~~~~---------~~~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~-~- 161 (852)
T 4fdd_A 93 SECLNNIGDSSPLIRATVGILITTIASKGE---------LQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSA-E- 161 (852)
T ss_dssp HHHHTTTTCSSHHHHHHHHHHHHHHHHHTT---------TTTCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHT-T-
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHhcC---------ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhH-H-
Confidence 345555555555677777777777776542 12348888888888776654333332 222221 1
Q ss_pred HHHHHHh---cchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhh
Q 024314 158 SLARYIL---ESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLK 234 (269)
Q Consensus 158 ~la~~iL---~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLK 234 (269)
.+.+--+ -+..+-.|++.++.++-+|-.-|...+..++..+.. -+..+.+.++...-+++.+++--+|+++++
T Consensus 162 ~~~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~----~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~ 237 (852)
T 4fdd_A 162 ILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQ----ALMLHIDSFIENLFALAGDEEPEVRKNVCR 237 (852)
T ss_dssp HHHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCH----HHHTSHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred HhchhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccH----HHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 1111000 012344566667788888888888888776654332 244566778888888899999999999999
Q ss_pred hhHHhhcCCCCHHHHHHhh
Q 024314 235 LLSEFLLEPPNSHIMKRYI 253 (269)
Q Consensus 235 LLgelLldr~N~~vM~rYi 253 (269)
.|+++.-. ....+..|+
T Consensus 238 ~L~~l~~~--~~~~~~~~l 254 (852)
T 4fdd_A 238 ALVMLLEV--RMDRLLPHM 254 (852)
T ss_dssp HHHHHHHH--CHHHHGGGH
T ss_pred HHHHHHHh--CHHHHHHHH
Confidence 99998863 334444443
No 14
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=89.98 E-value=2.2 Score=40.09 Aligned_cols=155 Identities=13% Similarity=0.111 Sum_probs=105.6
Q ss_pred hcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhc--cCcchhhhhhHHHHHHhh-h
Q 024314 80 EDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRECIK-F 156 (269)
Q Consensus 80 ~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY--~~~dial~~G~mLREcik-~ 156 (269)
.+.+..|+..|..=+-+.|.++.....++..... ..++.+.. ..++..|+..- .++++-..+-..|..+.. .
T Consensus 256 ~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~----~~~~~~~~-~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~ 330 (530)
T 1wa5_B 256 SQALPTLAKLIYSMDTETLVDACWAISYLSDGPQ----EAIQAVID-VRIPKRLVELLSHESTLVQTPALRAVGNIVTGN 330 (530)
T ss_dssp GGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCH----HHHHHHHH-TTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSC
T ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCH----HHHHHHHh-cCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCC
Confidence 3577778888877777788888888887764321 12233322 12333333332 344555555556666554 3
Q ss_pred HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhhh
Q 024314 157 PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLL 236 (269)
Q Consensus 157 e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKLL 236 (269)
+.....++....+..+.++++.++.+|...|..++..+-......+..++.. .++...-++|.++++-+|+.++..|
T Consensus 331 ~~~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~---~~l~~L~~lL~~~~~~v~~~a~~aL 407 (530)
T 1wa5_B 331 DLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDA---NLIPPLVKLLEVAEYKTKKEACWAI 407 (530)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---TCHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHC---CCHHHHHHHHhcCCHHHHHHHHHHH
Confidence 5666677777778888889999999999999999998776555555555543 3566677788899999999999999
Q ss_pred HHhhcC
Q 024314 237 SEFLLE 242 (269)
Q Consensus 237 gelLld 242 (269)
+.+...
T Consensus 408 ~~l~~~ 413 (530)
T 1wa5_B 408 SNASSG 413 (530)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999874
No 15
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=89.18 E-value=15 Score=36.82 Aligned_cols=155 Identities=14% Similarity=0.026 Sum_probs=109.6
Q ss_pred hhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhc---cCcchhhhhhHHHHHHhh
Q 024314 79 KEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY---DNKEVALHCGIMLRECIK 155 (269)
Q Consensus 79 ~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY---~~~dial~~G~mLREcik 155 (269)
..+.+..|+..|..=+-+.|..++....++-... +...-+...|+++..|+..- +++++-..+-..|+.+.+
T Consensus 148 ~~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~-----~~~~~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~ 222 (780)
T 2z6g_A 148 ATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-----ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSH 222 (780)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSH-----HHHHHHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHT
T ss_pred HhCCHHHHHHHHCCCCHHHHHHHHHHHHHHhCCC-----hhHHHHHhccChHHHHHHHHcCCCCHHHHHHHHHHHHHHhC
Confidence 3566777777776667778888888877776432 11233445677888776654 377888888889999888
Q ss_pred hHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhh
Q 024314 156 FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKL 235 (269)
Q Consensus 156 ~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKL 235 (269)
.+.-...+.....+..+.+.++.++-++--.|..++..+-..+......+...+ .+...-++|.++|--.++.++..
T Consensus 223 ~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g---~v~~Lv~lL~~~~~~v~~~a~~a 299 (780)
T 2z6g_A 223 HREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAG---GLQKMVALLNKTNVKFLAITTDC 299 (780)
T ss_dssp SHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTT---HHHHHHHGGGCCCHHHHHHHHHH
T ss_pred CchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcC---CHHHHHHHHhcCCHHHHHHHHHH
Confidence 877777777777888899999999888999999999988765443333333332 45566778888876667777777
Q ss_pred hHHhhc
Q 024314 236 LSEFLL 241 (269)
Q Consensus 236 LgelLl 241 (269)
|..+-.
T Consensus 300 L~~La~ 305 (780)
T 2z6g_A 300 LQILAY 305 (780)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 775543
No 16
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=89.14 E-value=8.2 Score=35.91 Aligned_cols=155 Identities=13% Similarity=0.093 Sum_probs=108.7
Q ss_pred HhhcHHHHHHhhC-CCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhc--cCcchhhhhhHHHHHHh
Q 024314 78 CKEDVLILLVHKL-PILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLRECI 154 (269)
Q Consensus 78 ~~~dll~~Li~~l-~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY--~~~dial~~G~mLREci 154 (269)
...+.+..|+..| ..-+-+.++.++..+.++.+....... ... +.++..|+.-- .++++...+-..|..+.
T Consensus 199 ~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~~~---~~~---~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~ 272 (528)
T 4b8j_A 199 LANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSF---EQT---RPALPALARLIHSNDEEVLTDACWALSYLS 272 (528)
T ss_dssp HHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCH---HHH---TTHHHHHHHHTTCCCHHHHHHHHHHHHHHT
T ss_pred HHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCcH---HHH---HHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 3445788888888 667888999999999999876532221 111 34444444333 34555555555565555
Q ss_pred hh-HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCC-Cccchhch
Q 024314 155 KF-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSS-NYVTRRQS 232 (269)
Q Consensus 155 k~-e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~-NYVTkRQS 232 (269)
.+ +.....++....+..+.+.+..++-++...|..++..+.+.........+.. .....+-++|.++ +--+++.+
T Consensus 273 ~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~---~~l~~L~~lL~~~~~~~v~~~A 349 (528)
T 4b8j_A 273 DGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDH---QALPCLLSLLTQNLKKSIKKEA 349 (528)
T ss_dssp SSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTT---THHHHHHHHHHSCCCHHHHHHH
T ss_pred cCCHHHHHHHHHcCHHHHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHh---hhHHHHHHHHcCCCcHHHHHHH
Confidence 54 3344566666778888888888888999999999999888666555555543 3566777888888 99999999
Q ss_pred hhhhHHhhc
Q 024314 233 LKLLSEFLL 241 (269)
Q Consensus 233 LKLLgelLl 241 (269)
...|+.+..
T Consensus 350 ~~~L~nl~~ 358 (528)
T 4b8j_A 350 CWTISNITA 358 (528)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHC
Confidence 999999975
No 17
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=85.33 E-value=22 Score=32.45 Aligned_cols=155 Identities=15% Similarity=0.026 Sum_probs=104.1
Q ss_pred hhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhc---cCcchhhhhhHHHHHHhh
Q 024314 79 KEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY---DNKEVALHCGIMLRECIK 155 (269)
Q Consensus 79 ~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY---~~~dial~~G~mLREcik 155 (269)
..+.+..|+..|..=+-+.|..++....++-... +..+-+...++++..|+..- +++++-..+-..|+.+.+
T Consensus 15 ~~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~-----~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~ 89 (529)
T 1jdh_A 15 ATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-----ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSH 89 (529)
T ss_dssp --CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSH-----HHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT
T ss_pred hHhhHHHHHHHhCCCCHHHHHHHHHHHHHHHcCC-----ccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHc
Confidence 3456666776666667778888888887776432 12233444455555554432 467788888888999888
Q ss_pred hHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhh
Q 024314 156 FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKL 235 (269)
Q Consensus 156 ~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKL 235 (269)
.+.....+.....+-.+.+.++.++-++-..|..++..+...+......+... ......-+++.+++--.+..+...
T Consensus 90 ~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~---g~i~~L~~ll~~~~~~~~~~~~~~ 166 (529)
T 1jdh_A 90 HREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLA---GGLQKMVALLNKTNVKFLAITTDC 166 (529)
T ss_dssp SHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHH---THHHHHHHGGGCCCHHHHHHHHHH
T ss_pred CchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHc---CCHHHHHHHHhcCCHHHHHHHHHH
Confidence 88777778888888889999999988888899999988876543332222222 245556677777776666666666
Q ss_pred hHHhhc
Q 024314 236 LSEFLL 241 (269)
Q Consensus 236 LgelLl 241 (269)
|+.+-.
T Consensus 167 L~~la~ 172 (529)
T 1jdh_A 167 LQILAY 172 (529)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 665544
No 18
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=85.28 E-value=8.1 Score=40.22 Aligned_cols=149 Identities=14% Similarity=0.109 Sum_probs=96.1
Q ss_pred HHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhccCc--chhhhhhHHHHHHhhhHHH
Q 024314 82 VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNK--EVALHCGIMLRECIKFPSL 159 (269)
Q Consensus 82 ll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~~~--dial~~G~mLREcik~e~l 159 (269)
++..|+..|..=+.+.|+-++...+.+...- |. . ..+.|+..|+.+..++ .+-..++.-|..++.+-.-
T Consensus 49 il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~-----~~-~---~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~ 119 (1230)
T 1u6g_C 49 VVKMILKLLEDKNGEVQNLAVKCLGPLVSKV-----KE-Y---QVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPP 119 (1230)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHHTTS-----CH-H---HHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHhC-----CH-H---HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCC
Confidence 4555666677778889999988888877421 11 1 2378888898886544 3333444444444332100
Q ss_pred H------HHHhcchhHHHHhhhcc-CCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhch
Q 024314 160 A------RYILESASFELFFKFVE-LPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQS 232 (269)
Q Consensus 160 a------~~iL~~~~f~~fF~yv~-~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQS 232 (269)
. ..-...+.+-.+++.++ .++.++...|+.++.+++....+.+ ....+.+...+-+++.+++-.+|+++
T Consensus 120 ~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~~~l----~~~~~~ll~~l~~~L~~~~~~vR~~a 195 (1230)
T 1u6g_C 120 ASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLL----VNFHPSILTCLLPQLTSPRLAVRKRT 195 (1230)
T ss_dssp ----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSC----TTTHHHHHHHHGGGGGCSSHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhHhHH----HHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 0 00011233445667777 5889999999999999886543322 23456778888888888888899999
Q ss_pred hhhhHHhhcCC
Q 024314 233 LKLLSEFLLEP 243 (269)
Q Consensus 233 LKLLgelLldr 243 (269)
++-||.+....
T Consensus 196 ~~al~~l~~~~ 206 (1230)
T 1u6g_C 196 IIALGHLVMSC 206 (1230)
T ss_dssp HHHHHHHTTTC
T ss_pred HHHHHHHHHhc
Confidence 99999887543
No 19
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=83.78 E-value=24 Score=33.24 Aligned_cols=158 Identities=9% Similarity=0.080 Sum_probs=94.8
Q ss_pred HHHHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhcc--HHHHHHHHHhccCcchhhhhhHHHHH
Q 024314 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENH--FELLDFLVVCYDNKEVALHCGIMLRE 152 (269)
Q Consensus 75 ~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~--peil~~L~~gY~~~dial~~G~mLRE 152 (269)
+.+...+.+..|+..|..=+-+.+..+.....++...... ....+... -..+..|+.. .++++--.+...|..
T Consensus 287 ~~v~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~----~~~~i~~~g~l~~L~~LL~~-~~~~i~~~a~~aL~n 361 (529)
T 3tpo_A 287 EMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDE----QTQKVIDAGALAVFPSLLTN-PKTNIQKEATWTMSN 361 (529)
T ss_dssp HHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHH----HHHHHHHTTGGGGHHHHTTC-SSHHHHHHHHHHHHH
T ss_pred HHHHhccchHHHHHHhcCCChhHHHHHHHHHHHHHccchH----HHHHHhhcccHHHHHHHHcC-CCHHHHHHHHHHHHH
Confidence 3456678888889888888888888888888887632211 11112111 1112222221 233333334444444
Q ss_pred Hhh-hHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcch-hhHHHHHHhhHHHHHHHHHhhhcCCCccchh
Q 024314 153 CIK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHL-TVVSEYLTAHYDEFFDLYEKLLTSSNYVTRR 230 (269)
Q Consensus 153 cik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk-~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkR 230 (269)
+.. .+.....+.....+..+...+..+++++-..|..++.-+..... .-+....+. ......-.||.+++-=+.+
T Consensus 362 l~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~---g~i~~L~~LL~~~d~~i~~ 438 (529)
T 3tpo_A 362 ITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHC---GIIEPLMNLLSAKDTKIIQ 438 (529)
T ss_dssp HHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHT---TCHHHHHHGGGCSCHHHHH
T ss_pred HhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHC---cCHHHHHHHhcCCCHHHHH
Confidence 433 45566667777778888889999999999888888877665322 222222222 2444556678887777777
Q ss_pred chhhhhHHhh
Q 024314 231 QSLKLLSEFL 240 (269)
Q Consensus 231 QSLKLLgelL 240 (269)
.+|.-|..|+
T Consensus 439 ~~L~aL~nil 448 (529)
T 3tpo_A 439 VILDAISNIF 448 (529)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777776665
No 20
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*
Probab=83.36 E-value=18 Score=33.92 Aligned_cols=140 Identities=14% Similarity=0.226 Sum_probs=105.3
Q ss_pred HHHHHHHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhccCcch-------hh
Q 024314 72 QLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEV-------AL 144 (269)
Q Consensus 72 qL~~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~~~di-------al 144 (269)
.+|.-+..++.+..+...+..=.||.--|+...|.-+|-+. +.++.+||..|-|-++....+-=..+- -=
T Consensus 155 ~la~~iL~~~~f~~fF~yv~~~~FdiasDAf~TfkelLt~H---k~lvaefL~~nyd~Ff~~y~~Ll~S~NYVTkRQSlK 231 (341)
T 1upk_A 155 PLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRH---KLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLK 231 (341)
T ss_dssp HHHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSS---HHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHhcCCCchHHHHHHHHHHHHHhcc---HHHHHHHHHHhHHHHHHHHHHHhcCCcchhHHHHHH
Confidence 34444555666677888888889999999999999999654 346789999997766655544322222 22
Q ss_pred hhhHHHHHHhhhHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcc-h-hhHHHHHHhhHHHHH
Q 024314 145 HCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKH-L-TVVSEYLTAHYDEFF 214 (269)
Q Consensus 145 ~~G~mLREcik~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~H-k-~lvaefl~~Nyd~Ff 214 (269)
..|.+|-+=.-+....+||-..+.+.-+...+..++=-|.-+||..||-...+- | +-|.+.|..|=++..
T Consensus 232 LLgelLldr~N~~vM~~Yis~~~nLkl~M~LL~d~sk~Iq~EAFhVFKvFVANP~K~~~I~~IL~~Nr~kLl 303 (341)
T 1upk_A 232 LLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLI 303 (341)
T ss_dssp HHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHTHHHHH
T ss_pred HHHHHHhCchHHHHHHHHhCCHHHHHHHHHHhcCchhchhhhhhhheeeeeeCCCCChHHHHHHHHHHHHHH
Confidence 457777776778888888888888888888899999999999999999866643 2 567799999966544
No 21
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=83.34 E-value=33 Score=33.06 Aligned_cols=159 Identities=16% Similarity=0.064 Sum_probs=109.2
Q ss_pred HHhhcHHHHHHhhCCCCC-hhhhhhHHHHHHHHhhcccCCccchhhhhhc-c--HHHHHHHHHhc---------------
Q 024314 77 VCKEDVLILLVHKLPILG-WEARKDLVHCWSILLKQKVDSTYCCVQFIEN-H--FELLDFLVVCY--------------- 137 (269)
Q Consensus 77 i~~~dll~~Li~~l~~L~-fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~-~--peil~~L~~gY--------------- 137 (269)
+...+.+..|+..|..=. .+.|+.++...+++..... ....+.. . |.++..|-.+.
T Consensus 348 v~~~~~l~~L~~lL~~~~~~~v~~~a~~~L~nLa~~~~-----~~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~ 422 (644)
T 2z6h_A 348 VRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPA-----NHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQ 422 (644)
T ss_dssp HHHTTHHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGG-----GHHHHHHTTHHHHHHHHHHHHHHHHTTC---------
T ss_pred HHHccChHHHHHHhCccCchHHHHHHHHHHHHHccCHH-----HHHHHHHcCCHHHHHHHHhccchhhhhHhhhccccch
Confidence 555677888888887653 6789999988888875221 1122222 1 44444444321
Q ss_pred -----cCcchhhhhhHHHHHHhhhHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHH
Q 024314 138 -----DNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDE 212 (269)
Q Consensus 138 -----~~~dial~~G~mLREcik~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~ 212 (269)
...++...+-..|+.+.+++.....+.....+..+.+.+..++-+|-.-|...+..+. .++.....+....
T Consensus 423 ~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~-~~~~~~~~i~~~g--- 498 (644)
T 2z6h_A 423 FVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA-QDKEAAEAIEAEG--- 498 (644)
T ss_dssp -CCSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHH-TSHHHHHHHHHTT---
T ss_pred hcccccHHHHHHHHHHHHHHHhcCHHHHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHH-cCHHHHHHHHHcC---
Confidence 1234555566677888888877666767778888889999999999888888888765 4454433333322
Q ss_pred HHHHHHhhhcCCCccchhchhhhhHHhhcCCC
Q 024314 213 FFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPP 244 (269)
Q Consensus 213 Ff~~yn~Ll~s~NYVTkRQSLKLLgelLldr~ 244 (269)
-.....+|+.++|--+|..+...|+.+..++.
T Consensus 499 ~l~~L~~ll~~~~~~vr~~A~~aL~~l~~~~~ 530 (644)
T 2z6h_A 499 ATAPLTELLHSRNEGVATYAAAVLFRMSEDKP 530 (644)
T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHTTTSC
T ss_pred ChhHHHHHHcCCCHHHHHHHHHHHHHHhccCc
Confidence 34567789999999999999999999988774
No 22
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=82.80 E-value=33 Score=34.42 Aligned_cols=151 Identities=9% Similarity=0.040 Sum_probs=84.0
Q ss_pred hhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhccCc---chhhhhhHHHHHHhhhH---HHHHHHhcchh
Q 024314 95 WEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNK---EVALHCGIMLRECIKFP---SLARYILESAS 168 (269)
Q Consensus 95 fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~~~---dial~~G~mLREcik~e---~la~~iL~~~~ 168 (269)
.+....+..++..+.+- .+..+ ..| =|.++..++.+|... ..--..|.++++.-..+ ....-++ ...
T Consensus 699 ~~v~e~~~~~l~~~~~~-~~~~~--~~~---l~~~~~~l~~~~~~~~~~~~l~l~~~li~~f~~~~~~~~~~~~~l-~~~ 771 (963)
T 2x19_B 699 AQVVEAVCAIFEKSVKT-LLDDF--APM---VPQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALF-LLV 771 (963)
T ss_dssp HHHHHHHHHHHHHHHHH-SSSTT--GGG---HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHTTCTTTCHHHHHHH-HHH
T ss_pred hHHHHHHHHHHHHHHHh-hcccc--ccc---HHHHHHHHHHHHHcCCccHHHHHHHHHHHHhCCCcchHHHHHHHH-HHH
Confidence 45555555555554421 22111 112 277888888888752 23333455555432221 1111111 111
Q ss_pred HHHHhhhcc-C--CCchhhhchHHHHHHHHhcchhhHHHHHHhh-HHHHHHHHHhhhcCCCccchhchhhhhHHhhcCCC
Q 024314 169 FELFFKFVE-L--PTFDVASDAFSTFKDLLTKHLTVVSEYLTAH-YDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPP 244 (269)
Q Consensus 169 f~~fF~yv~-~--~~FeiasDAf~TfkelLt~Hk~lvaefl~~N-yd~Ff~~yn~Ll~s~NYVTkRQSLKLLgelLldr~ 244 (269)
+...+.-++ . ..=|+.-++|.-+..++..++..+-. ... ++.++...-..+.+.+.-+.+.+++.|.+++..-.
T Consensus 772 ~~~~l~~~~~~~~~~pd~~~~~f~ll~~~~~~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~l~~l~~~~~ 849 (963)
T 2x19_B 772 TSVTLTLFQQGPRDHPDIVDSFMQLLAQALKRKPDLFLC--ERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELLPRCG 849 (963)
T ss_dssp HHHHHHHHHHCTTTCHHHHHHHHHHHHHHHHHCGGGGGC--TTSCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHGGGTT
T ss_pred HHHHHHHHhhCcccCchHHHHHHHHHHHHHHhCcHHHcC--CcccHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCC
Confidence 222222221 1 12478888899999988887765521 233 77788888888889999999999999999986533
Q ss_pred CHHHHHHhhC
Q 024314 245 NSHIMKRYIL 254 (269)
Q Consensus 245 N~~vM~rYis 254 (269)
+......++.
T Consensus 850 ~~~~~~~~~~ 859 (963)
T 2x19_B 850 EVESVGKVVQ 859 (963)
T ss_dssp SSCHHHHHTT
T ss_pred ChHHHHHHHH
Confidence 2233444443
No 23
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=81.96 E-value=18 Score=35.25 Aligned_cols=152 Identities=11% Similarity=0.142 Sum_probs=95.9
Q ss_pred cHHHHHHhhCCCC--ChhhhhhHHHHHHHHhhcccCCccchhhhhhcc-HHHHHHHHHhccCc----chhhhhhHHHHHH
Q 024314 81 DVLILLVHKLPIL--GWEARKDLVHCWSILLKQKVDSTYCCVQFIENH-FELLDFLVVCYDNK----EVALHCGIMLREC 153 (269)
Q Consensus 81 dll~~Li~~l~~L--~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~-peil~~L~~gY~~~----dial~~G~mLREc 153 (269)
+++..|+..+..= +.+.|+.+..++..+...-. | +.+..+ |.++..+..+..++ ++-..+-..|..+
T Consensus 128 ~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~~----~--~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~ 201 (876)
T 1qgr_A 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDID----P--EQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNS 201 (876)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSC----H--HHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcC----H--hhHHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence 5777787777665 67788888888888875421 1 223443 88888888887665 3333344444444
Q ss_pred hhh-H-HHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhc
Q 024314 154 IKF-P-SLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQ 231 (269)
Q Consensus 154 ik~-e-~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQ 231 (269)
+.+ + .+......+..+..+++.++.+..++..-|+..+..+...+.+....++.. .++.-.-+.+.+.+--++++
T Consensus 202 ~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~v~~~ 278 (876)
T 1qgr_A 202 LEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGP---ALFAITIEAMKSDIDEVALQ 278 (876)
T ss_dssp GGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTT---THHHHHHHHHTCSSHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHHHHHHhcCCchHHHHH
Confidence 432 0 000000001122233456677888999999999999999888777666652 34554445566777777889
Q ss_pred hhhhhHHhhc
Q 024314 232 SLKLLSEFLL 241 (269)
Q Consensus 232 SLKLLgelLl 241 (269)
++.+++.+.-
T Consensus 279 al~~l~~l~~ 288 (876)
T 1qgr_A 279 GIEFWSNVCD 288 (876)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9888887753
No 24
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=81.47 E-value=36 Score=32.02 Aligned_cols=176 Identities=12% Similarity=0.190 Sum_probs=108.5
Q ss_pred cHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhc-c--HHHHHHHHHhccCcchhhhhhHHHHHHhhh-
Q 024314 81 DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN-H--FELLDFLVVCYDNKEVALHCGIMLRECIKF- 156 (269)
Q Consensus 81 dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~-~--peil~~L~~gY~~~dial~~G~mLREcik~- 156 (269)
..+..|+..+..=+-+.+.+++...+++.....+ ..+-+.. . |-++..| +..++++...+-..|..++.+
T Consensus 251 ~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~~~----~~~~v~~~g~i~~Lv~lL--~~~~~~v~~~a~~aL~nl~~~~ 324 (529)
T 3tpo_A 251 QILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE----RIEMVVKKGVVPQLVKLL--GATELPIVTPALRAIGNIVTGT 324 (529)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHH----HHHHHHTTTCHHHHHHHH--TCSCHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhhhh----hHHHHHhccchHHHHHHh--cCCChhHHHHHHHHHHHHHccc
Confidence 3556666666666777777776666666532211 1111111 0 2222222 123455555555666666553
Q ss_pred HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhhh
Q 024314 157 PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLL 236 (269)
Q Consensus 157 e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKLL 236 (269)
+..+..++....+..+...+..++=+|-..|..++.-+-...+......++.+ .+...-.++.++++-+++.+..-|
T Consensus 325 ~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g---~i~~Lv~lL~~~~~~v~~~A~~aL 401 (529)
T 3tpo_A 325 DEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHG---LVPFLVGVLSKADFKTQKAAAWAI 401 (529)
T ss_dssp HHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTT---HHHHHHHHHHSSCHHHHHHHHHHH
T ss_pred hHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcC---cHHHHHHHhcCCCHHHHHHHHHHH
Confidence 55666777777777777888889989989999998888776665555555554 566677889999999999999999
Q ss_pred HHhhcCCCCHHHHHHhhCChhhHHHHHHhcc
Q 024314 237 SEFLLEPPNSHIMKRYILEVRFLKVMMTLLK 267 (269)
Q Consensus 237 gelLldr~N~~vM~rYis~~~NLkl~M~LLr 267 (269)
+.+......-++ +|+-+..-++.++.||+
T Consensus 402 ~nl~~~~~~~~~--~~l~~~g~i~~L~~LL~ 430 (529)
T 3tpo_A 402 TNYTSGGTVEQI--VYLVHCGIIEPLMNLLS 430 (529)
T ss_dssp HHHHHHSCHHHH--HHHHHTTCHHHHHHGGG
T ss_pred HHHHcCCCHHHH--HHHHHCcCHHHHHHHhc
Confidence 988765433222 33434444445555543
No 25
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=80.69 E-value=42 Score=32.31 Aligned_cols=156 Identities=15% Similarity=0.021 Sum_probs=105.5
Q ss_pred HhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhc---cCcchhhhhhHHHHHHh
Q 024314 78 CKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY---DNKEVALHCGIMLRECI 154 (269)
Q Consensus 78 ~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY---~~~dial~~G~mLREci 154 (269)
+..+.+..|+..|..=+-+.|..++....++-... +...-+..++.++..|+..- +++++-..+-..|+.+.
T Consensus 11 ~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~-----~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls 85 (644)
T 2z6h_A 11 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKE-----ASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLS 85 (644)
T ss_dssp -CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTST-----THHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHT
T ss_pred hhhchHHHHHHHHcCCCHHHHHHHHHHHHHHHCCC-----hhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 34556667777776667788888888888776533 12233445566666665553 35677778888889888
Q ss_pred hhHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhh
Q 024314 155 KFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLK 234 (269)
Q Consensus 155 k~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLK 234 (269)
+++.....+.....+-.+.+.++.++-++-..|..++..+...+......+.... .+...-++|.++|--.+..++.
T Consensus 86 ~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g---~i~~Lv~lL~~~~~~~~~~a~~ 162 (644)
T 2z6h_A 86 HHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAG---GLQKMVALLNKTNVKFLAITTD 162 (644)
T ss_dssp TSHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTT---HHHHHHHGGGCCCHHHHHHHHH
T ss_pred cChhhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCC---ChHHHHHHHCcCCHHHHHHHHH
Confidence 8887777777888888899999999888999999999988865443333333332 4555667777776544445555
Q ss_pred hhHHhhc
Q 024314 235 LLSEFLL 241 (269)
Q Consensus 235 LLgelLl 241 (269)
.|+.+-.
T Consensus 163 ~L~~La~ 169 (644)
T 2z6h_A 163 CLQILAY 169 (644)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 6665554
No 26
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=80.63 E-value=12 Score=34.28 Aligned_cols=163 Identities=12% Similarity=0.088 Sum_probs=108.4
Q ss_pred HHhhcHHHHHHhhC-CCCChhhhhhHHHHHHHHhhcccCCccchhhhhhcc----HHHHHHHHHhccCc--chhhhhhHH
Q 024314 77 VCKEDVLILLVHKL-PILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENH----FELLDFLVVCYDNK--EVALHCGIM 149 (269)
Q Consensus 77 i~~~dll~~Li~~l-~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~----peil~~L~~gY~~~--dial~~G~m 149 (269)
+...+.+..|+..| ..=+-+.++.++....++-....+++. -+... |-++..|-.+.+.+ ++.-.+...
T Consensus 166 i~~~G~Ip~Lv~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~----~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~a 241 (354)
T 3nmw_A 166 LREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA----DICAVDGALAFLVGTLTYRSQTNTLAIIESGGGI 241 (354)
T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHH----HHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHccChhhhH----HHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHH
Confidence 45556777777763 334567777665555444321111111 12212 32333332222221 355566677
Q ss_pred HHHHhh----hHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCC
Q 024314 150 LRECIK----FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSN 225 (269)
Q Consensus 150 LREcik----~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~N 225 (269)
||-... .+.-...+.+...+-.+.+.+..+++++-..|..++..+-.....-.....+.+ .+...-+||.+++
T Consensus 242 L~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G---~i~~Lv~LL~s~~ 318 (354)
T 3nmw_A 242 LRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMG---AVSMLKNLIHSKH 318 (354)
T ss_dssp HHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTT---HHHHHHTTTTCSS
T ss_pred HHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCC---CHHHHHHHHhCCC
Confidence 777664 566667788888899999999999999999999999998766666665655554 5666778999999
Q ss_pred ccchhchhhhhHHhhcCCCCH
Q 024314 226 YVTRRQSLKLLSEFLLEPPNS 246 (269)
Q Consensus 226 YVTkRQSLKLLgelLldr~N~ 246 (269)
--+|+.+..-|..|..++.+.
T Consensus 319 ~~i~~~A~~aL~nL~~~~~~~ 339 (354)
T 3nmw_A 319 KMIAMGSAAALRNLMANRPAK 339 (354)
T ss_dssp HHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHHHcCCHHH
Confidence 999999999999999987764
No 27
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=80.11 E-value=40 Score=31.67 Aligned_cols=176 Identities=12% Similarity=0.199 Sum_probs=106.6
Q ss_pred cHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhc-c--HHHHHHHHHhccCcchhhhhhHHHHHHhh-h
Q 024314 81 DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN-H--FELLDFLVVCYDNKEVALHCGIMLRECIK-F 156 (269)
Q Consensus 81 dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~-~--peil~~L~~gY~~~dial~~G~mLREcik-~ 156 (269)
..+..|+..+..=+-+.+.+++...+++.....+ ..+.+.. . |-++..| +..++++-..+-..|..+.. .
T Consensus 232 ~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~~~----~~~~i~~~g~i~~Lv~lL--~~~~~~v~~~al~aL~nl~~~~ 305 (510)
T 3ul1_B 232 QILPTLVRLLHHNDPEVLADSCWAISYLTDGPNE----RIEMVVKKGVVPQLVKLL--GATELPIVTPALRAIGNIVTGT 305 (510)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHH----HHHHHHTTTCHHHHHHHH--TCSCHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHHhhchhh----hHHHHHhcccchhhhhhh--cCCChhhhhHHHHHHHHhhcCC
Confidence 3556666666666667777776666666532110 1111111 0 2222222 12344444455555555443 4
Q ss_pred HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhhh
Q 024314 157 PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLL 236 (269)
Q Consensus 157 e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKLL 236 (269)
+..+..++....+..+...+..++=+|-..|..++..+...........++.+ .+...-.++.++++-+|+.+...|
T Consensus 306 ~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g---~i~~Lv~lL~~~~~~v~~~Aa~aL 382 (510)
T 3ul1_B 306 DEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHG---LVPFLVGVLSKADFKTQKEAAWAI 382 (510)
T ss_dssp HHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---HHHHHHHHHHSSCHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcC---CHHHHHHHHcCCCHHHHHHHHHHH
Confidence 66677777777777777888889989999999999888776665555555554 566777899999999999999999
Q ss_pred HHhhcCCCCHHHHHHhhCChhhHHHHHHhcc
Q 024314 237 SEFLLEPPNSHIMKRYILEVRFLKVMMTLLK 267 (269)
Q Consensus 237 gelLldr~N~~vM~rYis~~~NLkl~M~LLr 267 (269)
+.+...-..-++ +|+-+..-++.++.||+
T Consensus 383 ~Nl~~~~~~~~~--~~L~~~g~i~~L~~LL~ 411 (510)
T 3ul1_B 383 TNYTSGGTVEQI--VYLVHCGIIEPLMNLLS 411 (510)
T ss_dssp HHHHHHCCHHHH--HHHHHTTCHHHHHHGGG
T ss_pred HHHHccCCHHHH--HHHHHCCCHHHHHHHhc
Confidence 988764332221 23333444444444443
No 28
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=79.08 E-value=32 Score=34.55 Aligned_cols=160 Identities=16% Similarity=0.065 Sum_probs=107.2
Q ss_pred HHHhhcHHHHHHhhCCCCC-hhhhhhHHHHHHHHhhcccCCccchhhhhhc-c--HHHHHHHHHhc--------------
Q 024314 76 EVCKEDVLILLVHKLPILG-WEARKDLVHCWSILLKQKVDSTYCCVQFIEN-H--FELLDFLVVCY-------------- 137 (269)
Q Consensus 76 ei~~~dll~~Li~~l~~L~-fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~-~--peil~~L~~gY-------------- 137 (269)
.+...+.+..|+..|..=+ .+.|+.++...+++.+... ....+.. . |.++..|-.+.
T Consensus 483 ~v~~~~~l~~L~~lL~~~~~~~v~~~A~~aL~nLa~~~~-----~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq 557 (780)
T 2z6g_A 483 AVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPA-----NHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQ 557 (780)
T ss_dssp HHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHHSSHH-----HHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------
T ss_pred HHHHcCCHHHHHHHhcCCChHHHHHHHHHHHHHHhcCHH-----HHHHHHHCCCHHHHHHHHHhcchhHHHHHhhccccc
Confidence 3445567788888777655 3788999888888875211 1122222 1 44444443332
Q ss_pred ------cCcchhhhhhHHHHHHhhhHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHH
Q 024314 138 ------DNKEVALHCGIMLRECIKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYD 211 (269)
Q Consensus 138 ------~~~dial~~G~mLREcik~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd 211 (269)
...++...+...|+.+.+++.....+.....+..+.+.+..++-+|..-|...+..+. .++.....+...
T Consensus 558 ~~~~~~~~~~v~~~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~-~~~~~~~~i~~~--- 633 (780)
T 2z6g_A 558 QFVEGVRMEEIVEACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA-QDKEAAEAIEAE--- 633 (780)
T ss_dssp CCSTTCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHH-TSHHHHHHHHHT---
T ss_pred hhhcccChHHHHHHHHHHHHHHhcChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHh-cCHHHHHHHHHC---
Confidence 1133444555667777777776666767778888889999999888888888888775 344443333332
Q ss_pred HHHHHHHhhhcCCCccchhchhhhhHHhhcCCC
Q 024314 212 EFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPP 244 (269)
Q Consensus 212 ~Ff~~yn~Ll~s~NYVTkRQSLKLLgelLldr~ 244 (269)
.....+.+|+.++|--.|+.++..|+.+..++.
T Consensus 634 g~i~~L~~Ll~~~~~~Vr~~A~~aL~~l~~~~~ 666 (780)
T 2z6g_A 634 GATAPLTELLHSRNEGVATYAAAVLFRMSEDKP 666 (780)
T ss_dssp TCHHHHHHGGGCSCHHHHHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCh
Confidence 244556789999999999999999999998886
No 29
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=78.89 E-value=12 Score=37.33 Aligned_cols=154 Identities=9% Similarity=0.086 Sum_probs=99.9
Q ss_pred cHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhc-cHHHHHHHHHhccCcchhh--hhhHHHHHHhhh-
Q 024314 81 DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN-HFELLDFLVVCYDNKEVAL--HCGIMLRECIKF- 156 (269)
Q Consensus 81 dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~-~peil~~L~~gY~~~dial--~~G~mLREcik~- 156 (269)
+++..|+..+..=+...|.-+..+...+.......- ..+++.. -+.++..++.+..+++... .+=..|..++++
T Consensus 128 ~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~--~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~ 205 (852)
T 4fdd_A 128 DLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEIL--DSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISR 205 (852)
T ss_dssp THHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHH--HHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHh--chhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcc
Confidence 588888888888888888888887777775432210 0112222 2667888888877654322 111122222221
Q ss_pred -HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhh
Q 024314 157 -PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKL 235 (269)
Q Consensus 157 -e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKL 235 (269)
+.+.. .-++.+..+++.++.++.+|...|+..+-.+...+. +++..+.+.++.-.-+++.+.+--+|++++..
T Consensus 206 ~~~~~~--~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~----~~~~~~l~~l~~~l~~~~~~~~~~vr~~a~e~ 279 (852)
T 4fdd_A 206 TQALML--HIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRM----DRLLPHMHNIVEYMLQRTQDQDENVALEACEF 279 (852)
T ss_dssp CHHHHT--SHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCH----HHHGGGHHHHHHHHHHHHTCSSHHHHHHHHHH
T ss_pred cHHHHH--HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCH----HHHHHHHHHHHHHHHHHccCCcHHHHHHHHHH
Confidence 11100 011344566677788999999999999998887654 45556667788888888888888889999999
Q ss_pred hHHhhcC
Q 024314 236 LSEFLLE 242 (269)
Q Consensus 236 LgelLld 242 (269)
++.+.-.
T Consensus 280 l~~l~~~ 286 (852)
T 4fdd_A 280 WLTLAEQ 286 (852)
T ss_dssp HHHHTTS
T ss_pred HHHHhcc
Confidence 9987643
No 30
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=77.96 E-value=13 Score=31.03 Aligned_cols=152 Identities=14% Similarity=0.040 Sum_probs=108.1
Q ss_pred CCChhhhhhHHHHHHHHhhcccCCccchhhhhhc-cHHHHHHHHHhccCcc--hhhhhhHHHHHHhhhHHHHHHHhcchh
Q 024314 92 ILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN-HFELLDFLVVCYDNKE--VALHCGIMLRECIKFPSLARYILESAS 168 (269)
Q Consensus 92 ~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~-~peil~~L~~gY~~~d--ial~~G~mLREcik~e~la~~iL~~~~ 168 (269)
.-+...|+.+...+..+.+.- +. .+.. .+.++..|+....++. +--.+..-|..|+..-.+ ++.
T Consensus 68 d~~~~V~~~a~~~l~~la~~l-~~------~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~~------~~l 134 (242)
T 2qk2_A 68 DSNVVLVAMAGKCLALLAKGL-AK------RFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYASTSL------EAQ 134 (242)
T ss_dssp CSCHHHHHHHHHHHHHHHHHH-GG------GGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSCH------HHH
T ss_pred CCCHHHHHHHHHHHHHHHHHH-hh------hHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCH------HHH
Confidence 557778888888888887532 21 2233 3888999998887654 556677777777664332 234
Q ss_pred HHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhhhHHhhcCCCCHHH
Q 024314 169 FELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHI 248 (269)
Q Consensus 169 f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKLLgelLldr~N~~v 248 (269)
+..+...++..+-.+-..+...+..++.+|..- .+....++.+....-+++..+++-.|..+...||.+..-=. ...
T Consensus 135 l~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~--~~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg-~~~ 211 (242)
T 2qk2_A 135 QESIVESLSNKNPSVKSETALFIARALTRTQPT--ALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMG-DKA 211 (242)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGG--GCCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHC-HHH
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCC--CccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcC-HHH
Confidence 455677788889999999999999999887421 12233456788888899999999999999999999874222 356
Q ss_pred HHHhhCChhhH
Q 024314 249 MKRYILEVRFL 259 (269)
Q Consensus 249 M~rYis~~~NL 259 (269)
+..|+.+-+..
T Consensus 212 ~~~~l~~L~~~ 222 (242)
T 2qk2_A 212 VTPLLADVDPL 222 (242)
T ss_dssp HGGGGTTSCHH
T ss_pred HHHHHHhcCHH
Confidence 77788765543
No 31
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=77.52 E-value=37 Score=34.38 Aligned_cols=151 Identities=20% Similarity=0.182 Sum_probs=93.4
Q ss_pred HHHHHHHhhhhhcCCCCCC-------CCHHHHHHHHHHHHh-hcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCcc
Q 024314 46 IEKNFVTMRCMLSGDGEVE-------PNADQVLQLATEVCK-EDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTY 117 (269)
Q Consensus 46 ~~K~L~~mK~il~G~~e~e-------p~~e~~~qL~~ei~~-~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~ 117 (269)
+.-.|.-+-.++.++++.+ ...+...+++.++.+ .+-+..|+..|..=+|..|--+.++...++..+...
T Consensus 79 v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~-- 156 (651)
T 3grl_A 79 IGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQ-- 156 (651)
T ss_dssp HHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHH--
T ss_pred HHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHH--
Confidence 3334555555666665432 112334567777554 488999999999999999999999999999755321
Q ss_pred chhhhhhccHHHHHHHHHhccCcc-hhhhhh-HHHHHHhh-hHHHHHHHhcchhHHHHhhhccCCCc----hhhhchHHH
Q 024314 118 CCVQFIENHFELLDFLVVCYDNKE-VALHCG-IMLRECIK-FPSLARYILESASFELFFKFVELPTF----DVASDAFST 190 (269)
Q Consensus 118 p~v~Yl~~~peil~~L~~gY~~~d-ial~~G-~mLREcik-~e~la~~iL~~~~f~~fF~yv~~~~F----eiasDAf~T 190 (269)
+=+++...|.-+..|+.--+++. +-=+-+ .+|-+..+ +..+-+++=.-.-|..+|+-++...- .|..|++..
T Consensus 157 -~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~l 235 (651)
T 3grl_A 157 -VQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLIL 235 (651)
T ss_dssp -HHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHH
T ss_pred -HHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHH
Confidence 23668888888888888776542 111111 11122222 23333333333468888887776555 778888888
Q ss_pred HHHHHhcch
Q 024314 191 FKDLLTKHL 199 (269)
Q Consensus 191 fkelLt~Hk 199 (269)
+..|+..+.
T Consensus 236 l~nLLr~N~ 244 (651)
T 3grl_A 236 LQNLLKNNN 244 (651)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHhcCH
Confidence 888887543
No 32
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=75.99 E-value=29 Score=33.13 Aligned_cols=162 Identities=12% Similarity=0.099 Sum_probs=106.8
Q ss_pred HHHhhcHHHHHHhh-CCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhcc----HHHHHHHHHhccCc--chhhhhhH
Q 024314 76 EVCKEDVLILLVHK-LPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENH----FELLDFLVVCYDNK--EVALHCGI 148 (269)
Q Consensus 76 ei~~~dll~~Li~~-l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~----peil~~L~~gY~~~--dial~~G~ 148 (269)
.+...+.+..|+.. +..=+-+.++.++....++-....+++. -+... |-++..|-.+.+.+ ++.-.+..
T Consensus 281 ~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~----~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~ 356 (458)
T 3nmz_A 281 TLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA----DICAVDGALAFLVGTLTYRSQTNTLAIIESGGG 356 (458)
T ss_dssp HHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHH----HHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHH----HHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHH
Confidence 34556777788876 4444666777665444444321111111 12212 22222222222222 35566667
Q ss_pred HHHHHhh----hHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCC
Q 024314 149 MLRECIK----FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSS 224 (269)
Q Consensus 149 mLREcik----~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~ 224 (269)
.||.+.. .+.-...+.+...+-.+.+.+..+++++-..|..++..+-...........+.. .+.-.-+||.++
T Consensus 357 aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G---~I~~Lv~LL~s~ 433 (458)
T 3nmz_A 357 ILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMG---AVSMLKNLIHSK 433 (458)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHT---HHHHHHTTTTCS
T ss_pred HHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCC---CHHHHHHHHhCC
Confidence 7887664 566667777888888999999999999999999999998766666666655554 566777899999
Q ss_pred CccchhchhhhhHHhhcCCC
Q 024314 225 NYVTRRQSLKLLSEFLLEPP 244 (269)
Q Consensus 225 NYVTkRQSLKLLgelLldr~ 244 (269)
+--+++.+..-|..|..+++
T Consensus 434 ~~~v~~~Aa~AL~nL~~~~p 453 (458)
T 3nmz_A 434 HKMIAMGSAAALRNLMANRP 453 (458)
T ss_dssp SHHHHHHHHHHHHHHHTCCS
T ss_pred CHHHHHHHHHHHHHHHcCCH
Confidence 99999999999999987654
No 33
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=75.97 E-value=21 Score=33.12 Aligned_cols=59 Identities=17% Similarity=0.086 Sum_probs=46.3
Q ss_pred HHHHHH-HHHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhc-cHHHHHHHHHh
Q 024314 70 VLQLAT-EVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN-HFELLDFLVVC 136 (269)
Q Consensus 70 ~~qL~~-ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~-~peil~~L~~g 136 (269)
-.+|+. + .++|..|+ +...+|.+.|..++.|.+.+||.. .|+++++.+ +|..+..++..
T Consensus 62 G~KI~~~e---f~lL~nL~-~~~~~~~~~rE~aarII~ssLRNN----P~Al~~V~~~~p~fv~~lf~~ 122 (315)
T 3qml_C 62 GYKIITHE---FALLANLS-LNENLPLTLRELSTRVITSCLRNN----PPVVEFINESFPNFKSKIMAA 122 (315)
T ss_dssp HHHHHHHH---HHHHHHHH-HCTTSCHHHHHHHHHHHHHHHTTC----HHHHHHHHHHCTTHHHHHHHH
T ss_pred hhHHHhCc---HHHHHHHH-hhccCChhHHHHHHHHHHHHHccC----HHHHHHHHHhChhHHHHHHHH
Confidence 345554 4 37888888 555699999999999999999854 468999877 69999999854
No 34
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=75.02 E-value=19 Score=31.92 Aligned_cols=152 Identities=11% Similarity=0.154 Sum_probs=89.3
Q ss_pred cHHHHHHhhCCCC--ChhhhhhHHHHHHHHhhcccCCccchhhhhhcc-HHHHHHHHHhccCcc----hhhhhhHHHHHH
Q 024314 81 DVLILLVHKLPIL--GWEARKDLVHCWSILLKQKVDSTYCCVQFIENH-FELLDFLVVCYDNKE----VALHCGIMLREC 153 (269)
Q Consensus 81 dll~~Li~~l~~L--~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~-peil~~L~~gY~~~d----ial~~G~mLREc 153 (269)
+++..|+..+..= +.+.|.-+..++..+...-.+ +.+..+ +.++..++.+-.+++ +-..+-..+..+
T Consensus 128 ~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~------~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~ 201 (462)
T 1ibr_B 128 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDP------EQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNS 201 (462)
T ss_dssp THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCG------GGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCc------hhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 6888888888766 778888888888888864321 112332 678888888876652 111111112222
Q ss_pred hhh-H-HHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhc
Q 024314 154 IKF-P-SLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQ 231 (269)
Q Consensus 154 ik~-e-~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQ 231 (269)
+.+ + ........+-.+.-+.+.+..+..++...|+..|..+...+......++.. .++.-+-..+.+.+--.+++
T Consensus 202 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~v~~~ 278 (462)
T 1ibr_B 202 LEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGP---ALFAITIEAMKSDIDEVALQ 278 (462)
T ss_dssp TTTTHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTT---THHHHHHHHHHCSSHHHHHH
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHcCCchHHHHH
Confidence 111 0 000000000012223345677888888899999999888776544444431 44444445666777778889
Q ss_pred hhhhhHHhhc
Q 024314 232 SLKLLSEFLL 241 (269)
Q Consensus 232 SLKLLgelLl 241 (269)
++..++.+.-
T Consensus 279 a~~~l~~~~~ 288 (462)
T 1ibr_B 279 GIEFWSNVCD 288 (462)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988887753
No 35
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=72.86 E-value=26 Score=31.90 Aligned_cols=153 Identities=14% Similarity=0.085 Sum_probs=96.5
Q ss_pred hhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhc-c-HHHHHHHHHhccCcchhhhhhHHHHHHhhh
Q 024314 79 KEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIEN-H-FELLDFLVVCYDNKEVALHCGIMLRECIKF 156 (269)
Q Consensus 79 ~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~-~-peil~~L~~gY~~~dial~~G~mLREcik~ 156 (269)
+.+.+..|+..+..=+.+.|..+.....++-....+ ...-+.. . .+.+..+++..+..+..-.++..|+....+
T Consensus 141 ~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~----~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~ 216 (529)
T 1jdh_A 141 LAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQE----SKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVC 216 (529)
T ss_dssp HHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHH----HHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS
T ss_pred HcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHH----HHHHHHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhcC
Confidence 457778888887765555565555555555431111 1111111 1 233333455555556666677788877777
Q ss_pred HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhhh
Q 024314 157 PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLL 236 (269)
Q Consensus 157 e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKLL 236 (269)
+.....+.....+..+.+.+..++=++...|..++..+-...+.. ......+...-++|.+++--++..+...|
T Consensus 217 ~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~~~------~~~~~~i~~L~~ll~~~~~~v~~~a~~~L 290 (529)
T 1jdh_A 217 SSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQ------EGMEGLLGTLVQLLGSDDINVVTCAAGIL 290 (529)
T ss_dssp TTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTC------SCCHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred cccHHHHHHCCCHHHHHHHHhCCChHHHHHHHHHHHHHhcCChhh------HHHHhHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 777777777777888888888777777777777766654322211 11235677777888888888899999999
Q ss_pred HHhhc
Q 024314 237 SEFLL 241 (269)
Q Consensus 237 gelLl 241 (269)
+.+-.
T Consensus 291 ~~L~~ 295 (529)
T 1jdh_A 291 SNLTC 295 (529)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 98854
No 36
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=72.63 E-value=72 Score=30.90 Aligned_cols=155 Identities=13% Similarity=0.157 Sum_probs=96.7
Q ss_pred cHHHHHHhhCCCC-ChhhhhhHHHHHHHHhhcccCCccchhhhhhc-cHHHHHHHHHhccCc----chhhhhhHHHHHHh
Q 024314 81 DVLILLVHKLPIL-GWEARKDLVHCWSILLKQKVDSTYCCVQFIEN-HFELLDFLVVCYDNK----EVALHCGIMLRECI 154 (269)
Q Consensus 81 dll~~Li~~l~~L-~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~-~peil~~L~~gY~~~----dial~~G~mLREci 154 (269)
+++..|+..+..= +-..|.-+..++..+...-.+ . ++-+.. -+.++..+..+-.++ ++-..+-..+..|+
T Consensus 134 ~ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~~~-~---~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~ 209 (861)
T 2bpt_A 134 ELMKIMVDNTGAEQPENVKRASLLALGYMCESADP-Q---SQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSL 209 (861)
T ss_dssp HHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSST-T---SSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCh-h---hhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence 5778888888766 677788888888777764211 1 111222 377888888876654 34444444444443
Q ss_pred hh--HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhch
Q 024314 155 KF--PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQS 232 (269)
Q Consensus 155 k~--e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQS 232 (269)
.+ +.+....-.+..+..+++.++.++.++..-|+..+.++...+...+..++.+ .++.-....+.+.+.-++.++
T Consensus 210 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~~~~~~~l~~---~l~~~~~~~~~~~~~~vr~~a 286 (861)
T 2bpt_A 210 IFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQ---ALYALTIATMKSPNDKVASMT 286 (861)
T ss_dssp GGCHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHH---THHHHHHHHTTCSSHHHHHHH
T ss_pred HHHHHHccChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHcCCcHHHHHHH
Confidence 21 0110000001122334456778888998889999999988877655554442 566666677888888899999
Q ss_pred hhhhHHhhcC
Q 024314 233 LKLLSEFLLE 242 (269)
Q Consensus 233 LKLLgelLld 242 (269)
+.+++.+.-.
T Consensus 287 ~~~l~~l~~~ 296 (861)
T 2bpt_A 287 VEFWSTICEE 296 (861)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887653
No 37
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=70.69 E-value=60 Score=30.03 Aligned_cols=144 Identities=12% Similarity=0.115 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHH-hhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccc
Q 024314 40 EKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVC-KEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYC 118 (269)
Q Consensus 40 ~k~~ee~~K~L~~mK~il~G~~e~ep~~e~~~qL~~ei~-~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p 118 (269)
+..+|...-.|..+- .|+++ ...++++.+. ..+.+..|+..|..=+++.||+++...+++-+..
T Consensus 298 ~~~~e~a~~aL~nl~---~~~~~------~~~~~~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~~~------ 362 (457)
T 1xm9_A 298 DATLEACAGALQNLT---ASKGL------MSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP------ 362 (457)
T ss_dssp HHHHHHHHHHHHHHT---TCSSS------HHHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSG------
T ss_pred HHHHHHHHHHHHHhc---cCcCc------chHHHHHHHHHHcCCchHHHHHHhCCCHhHHHHHHHHHHHHhcCH------
Confidence 345566666666543 23321 2223455555 4688999999999999999999999999997632
Q ss_pred hhhhhhc-c--HHHHHHHHHhcc----CcchhhhhhHHHHHHhh-hHHHHHHHhcchhHHHHhhhccCC-CchhhhchHH
Q 024314 119 CVQFIEN-H--FELLDFLVVCYD----NKEVALHCGIMLRECIK-FPSLARYILESASFELFFKFVELP-TFDVASDAFS 189 (269)
Q Consensus 119 ~v~Yl~~-~--peil~~L~~gY~----~~dial~~G~mLREcik-~e~la~~iL~~~~f~~fF~yv~~~-~FeiasDAf~ 189 (269)
...++.. + |.++..|-.+-. .+++...+-..|..+++ ....++.+.+...+..+.+....+ +=+|.-.|..
T Consensus 363 ~~~~~i~~~~i~~Lv~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~~~~~~~~i~~~g~l~~L~~L~~~~~~~~i~~~A~~ 442 (457)
T 1xm9_A 363 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 442 (457)
T ss_dssp GGHHHHHHHTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHHcCCCcHHHHHHHHH
Confidence 2344333 2 444444433211 12444444444555554 356777787777888888777776 6677777777
Q ss_pred HHHHHHhcch
Q 024314 190 TFKDLLTKHL 199 (269)
Q Consensus 190 TfkelLt~Hk 199 (269)
++..++ .|+
T Consensus 443 ~L~~~~-~~~ 451 (457)
T 1xm9_A 443 LLSDMW-SSK 451 (457)
T ss_dssp HHHTTS-SST
T ss_pred HHHHHH-cch
Confidence 665544 344
No 38
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=69.78 E-value=73 Score=29.80 Aligned_cols=158 Identities=9% Similarity=0.070 Sum_probs=91.1
Q ss_pred HHHHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHh--ccCcchhhhhhHHHHH
Q 024314 75 TEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVC--YDNKEVALHCGIMLRE 152 (269)
Q Consensus 75 ~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~g--Y~~~dial~~G~mLRE 152 (269)
+.+...+.+..|+..|..=+-+.+..+.....++....... ...+.. ..++..|+.- -.++++--.+-..|..
T Consensus 268 ~~i~~~g~i~~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~~----~~~i~~-~g~l~~L~~LL~~~~~~v~~~A~~aL~n 342 (510)
T 3ul1_B 268 EMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQ----TQKVID-AGALAVFPSLLTNPKTNIQKEATWTMSN 342 (510)
T ss_dssp HHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHH----HHHHHH-TTGGGGCC-CTTCSSHHHHHHHHHHHHH
T ss_pred HHHHhcccchhhhhhhcCCChhhhhHHHHHHHHhhcCCHHH----HHHHhh-ccchHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 34566778888888888888888888888887776422110 111111 0111111111 1122332333333333
Q ss_pred Hh-hhHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcch-hhHHHHHHhhHHHHHHHHHhhhcCCCccchh
Q 024314 153 CI-KFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHL-TVVSEYLTAHYDEFFDLYEKLLTSSNYVTRR 230 (269)
Q Consensus 153 ci-k~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk-~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkR 230 (269)
+. ..+.....+.....+..+.+.+..+++++-..|..++.-+..... ..+...... ..+...-.||.+++-=+.+
T Consensus 343 l~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~---g~i~~L~~LL~~~d~~i~~ 419 (510)
T 3ul1_B 343 ITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC---GIIEPLMNLLSAKDTKIIQ 419 (510)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHT---TCHHHHHHGGGCSCHHHHH
T ss_pred HHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHC---CCHHHHHHHhcCCCHHHHH
Confidence 33 345556667777778888888999999999888888877665322 222222222 2445556677777777777
Q ss_pred chhhhhHHhh
Q 024314 231 QSLKLLSEFL 240 (269)
Q Consensus 231 QSLKLLgelL 240 (269)
.+|.-|..|+
T Consensus 420 ~~L~aL~nil 429 (510)
T 3ul1_B 420 VILDAISNIF 429 (510)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777776665
No 39
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=68.90 E-value=48 Score=27.38 Aligned_cols=137 Identities=13% Similarity=0.156 Sum_probs=85.1
Q ss_pred HHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhcc-Ccchhh------hhhHHHHHHhhhHH
Q 024314 86 LVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYD-NKEVAL------HCGIMLRECIKFPS 158 (269)
Q Consensus 86 Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~-~~dial------~~G~mLREcik~e~ 158 (269)
+...+..=+|..|+.+..-...++....+ ... ....+++..|...-. +++... ..|.+.+. ++. .
T Consensus 20 l~~~l~s~~w~~R~~a~~~L~~l~~~~~~--~~~----~~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~-l~~-~ 91 (242)
T 2qk2_A 20 FYDKLEEKKWTLRKESLEVLEKLLTDHPK--LEN----GEYGALVSALKKVITKDSNVVLVAMAGKCLALLAKG-LAK-R 91 (242)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHCSS--BCC----CCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHH-HGG-G
T ss_pred HHhhhccCCHHHHHHHHHHHHHHHccCCC--CCC----CCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH-Hhh-h
Confidence 34445577899999999888888864211 110 113677777777763 554332 12222211 111 0
Q ss_pred HHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhhhHH
Q 024314 159 LARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSE 238 (269)
Q Consensus 159 la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKLLge 238 (269)
+..++ ...+-.+++.+..++=.|..-|..++..+.... +++.+.......+.+.|.-+|.+++.+|+.
T Consensus 92 ~~~~~--~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~----------~~~~ll~~l~~~l~~~~~~vr~~~l~~l~~ 159 (242)
T 2qk2_A 92 FSNYA--SACVPSLLEKFKEKKPNVVTALREAIDAIYAST----------SLEAQQESIVESLSNKNPSVKSETALFIAR 159 (242)
T ss_dssp GHHHH--HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS----------CHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC----------CHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 01100 112334455566677778788888888776532 467788888888999999999999999999
Q ss_pred hhcC
Q 024314 239 FLLE 242 (269)
Q Consensus 239 lLld 242 (269)
++..
T Consensus 160 ~l~~ 163 (242)
T 2qk2_A 160 ALTR 163 (242)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 8754
No 40
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=65.36 E-value=86 Score=30.34 Aligned_cols=46 Identities=4% Similarity=0.140 Sum_probs=30.3
Q ss_pred hccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhh
Q 024314 175 FVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLL 221 (269)
Q Consensus 175 yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll 221 (269)
.+..++-.|.+.|...+.++...++.. .+.+....+.++....+++
T Consensus 187 lL~D~d~~V~~~Al~~L~~i~~~~~~~-~~~~~~~v~~l~~~L~~~~ 232 (618)
T 1w63_A 187 LLNEKNHGVLHTSVVLLTEMCERSPDM-LAHFRKLVPQLVRILKNLI 232 (618)
T ss_dssp STTCCCHHHHHHHHHHHHHHCCSHHHH-HHHHHTTHHHHHHHHHHHH
T ss_pred HhCCCCHhHHHHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHHHHHH
Confidence 455778889999999999987765553 3344455555655555543
No 41
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=65.11 E-value=1.3e+02 Score=30.97 Aligned_cols=185 Identities=9% Similarity=0.055 Sum_probs=111.6
Q ss_pred HHHHHHHHHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhcc---HHHHHHHHHhccCcchhhhh
Q 024314 70 VLQLATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENH---FELLDFLVVCYDNKEVALHC 146 (269)
Q Consensus 70 ~~qL~~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~---peil~~L~~gY~~~dial~~ 146 (269)
+..-++.+...+.+..|+..+..=+-+.|+.++.+..++-..+ +..+.+..+ |-++..|-.|.... --.-+
T Consensus 484 v~~r~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d~-----~~r~~Vv~~Gaip~Lv~LL~s~~~~~-k~~Aa 557 (810)
T 3now_A 484 INKRITVLANEGITTALCALAKTESHNSQELIARVLNAVCGLK-----ELRGKVVQEGGVKALLRMALEGTEKG-KRHAT 557 (810)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSH-----HHHHHHHHTTHHHHHHHHHHSSCHHH-HHHHH
T ss_pred HHHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-----HHHHHHHHCCCHHHHHHHHccCCHHH-HHHHH
Confidence 3333478889999999999999888899999999999996421 234555553 55666665553210 00111
Q ss_pred hHHHHHHhhhHHHHHHHhc----chhHHHHhhhccCCCc-hhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhh
Q 024314 147 GIMLRECIKFPSLARYILE----SASFELFFKFVELPTF-DVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLL 221 (269)
Q Consensus 147 G~mLREcik~e~la~~iL~----~~~f~~fF~yv~~~~F-eiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll 221 (269)
..+-+=|+-.++ ..++. .+.+-.+.+.+..+.- ....+|...+.-|.+.........+.. ..+...-.||
T Consensus 558 ~AL~nL~~~~~p--~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~a---G~l~~Lv~LL 632 (810)
T 3now_A 558 QALARIGITINP--EVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKE---QGVSKIEYYL 632 (810)
T ss_dssp HHHHHHHHHSCH--HHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT---THHHHHHHHH
T ss_pred HHHHHHhcCCCh--hhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHc---CCHHHHHHHH
Confidence 111111221110 00000 0123334444443322 222456666666665444444444443 3577888899
Q ss_pred cCCCccchhchhhhhHHhhcCCCCHHHHHHhhCChhhHHHHHHhccc
Q 024314 222 TSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLKV 268 (269)
Q Consensus 222 ~s~NYVTkRQSLKLLgelLldr~N~~vM~rYis~~~NLkl~M~LLr~ 268 (269)
.|+|--.++.++.+|+.|...+ ....+++.+..-++.+..||+.
T Consensus 633 ~s~~~~Vq~~A~~~L~NLa~~~---~~~~~~v~~~g~l~~Lv~LL~s 676 (810)
T 3now_A 633 MEDHLYLTRAAAQCLCNLVMSE---DVIKMFEGNNDRVKFLALLCED 676 (810)
T ss_dssp HSCCTTHHHHHHHHHHHHTTSH---HHHHHHHSSSSHHHHHHHGGGC
T ss_pred cCCCHHHHHHHHHHHHHHhCCh---HHHHHHHhccCcHHHHHHHhcC
Confidence 9999999999999999998744 5667788667789988888763
No 42
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=63.70 E-value=23 Score=34.52 Aligned_cols=143 Identities=9% Similarity=-0.039 Sum_probs=82.0
Q ss_pred CChhhhhhHHHHHHHHhhcccCCc--cchhhhhh----ccHHHHHHHHHhcc--CcchhhhhhHHHHHHhhhHHHHHHHh
Q 024314 93 LGWEARKDLVHCWSILLKQKVDST--YCCVQFIE----NHFELLDFLVVCYD--NKEVALHCGIMLRECIKFPSLARYIL 164 (269)
Q Consensus 93 L~fE~RKdv~~If~~llr~~~~~~--~p~v~Yl~----~~peil~~L~~gY~--~~dial~~G~mLREcik~e~la~~iL 164 (269)
-+.+.|.-++.++.+.+...-..+ .+.-.|-. .+..|-..|+.+-. ++.+ ..++.++.+..+++-... -
T Consensus 49 ~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~w~~l~~~~~~~ik~~ll~~l~~~~~~~-~~~~~~l~~i~~~~~~~~--~ 125 (876)
T 1qgr_A 49 NSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTETYRP-SSASQCVAGIACAEIPVN--Q 125 (876)
T ss_dssp SCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTTCCSSS-CHHHHHHHHHHHHHGGGT--C
T ss_pred CCHHHHHHHHHHHHHhccccchHhHHHHHhhhccCCHHHHHHHHHHHHHHhCCCcHHH-HHHHHHHHHHHHhhCccc--c
Confidence 466778888777777764221000 00001111 12333333444433 3445 566666666665531100 0
Q ss_pred cchhHHHHhhhccCC--CchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCC--CccchhchhhhhHHhh
Q 024314 165 ESASFELFFKFVELP--TFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSS--NYVTRRQSLKLLSEFL 240 (269)
Q Consensus 165 ~~~~f~~fF~yv~~~--~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~--NYVTkRQSLKLLgelL 240 (269)
..+.+..+++.++.+ +-++---|+.++..+...- ..+.+....+.++..+.+.+.++ +.-.|..+++-|+.++
T Consensus 126 w~~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~---~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~ 202 (876)
T 1qgr_A 126 WPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDI---DPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (876)
T ss_dssp CTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHS---CHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHG
T ss_pred cHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhc---CHhhHHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence 123445566667776 6666677777777776532 12335667777888888888887 7888999999999877
Q ss_pred c
Q 024314 241 L 241 (269)
Q Consensus 241 l 241 (269)
.
T Consensus 203 ~ 203 (876)
T 1qgr_A 203 E 203 (876)
T ss_dssp G
T ss_pred H
Confidence 3
No 43
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=59.45 E-value=1.1e+02 Score=28.38 Aligned_cols=156 Identities=11% Similarity=0.117 Sum_probs=93.6
Q ss_pred ChHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhhcHHHHHHhhCCC
Q 024314 13 TPLEVVKATKVSLMALDIKTVVEVKALEKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLILLVHKLPI 92 (269)
Q Consensus 13 tP~e~Vr~~~e~l~~l~~~~~~~~~~~~k~~ee~~K~L~~mK~il~G~~e~ep~~e~~~qL~~ei~~~dll~~Li~~l~~ 92 (269)
+|.--|+.+.|.|. ++++ +|..+.|..+|.++..|. .+|+|+++.|=+..|+.....
T Consensus 115 sps~ra~~iiekL~---~~~~----------~~lr~aLfsLk~~~q~D~----------~Fa~EFI~~~GL~~Li~vi~~ 171 (339)
T 3dad_A 115 QLSVRVNAILEKLY---SSSG----------PELRRSLFSLKQIFQEDK----------DLVPEFVHSEGLSCLIRVGAA 171 (339)
T ss_dssp CHHHHHHHHHHHHH---HCCH----------HHHHHHHHHHHHHHHTCT----------THHHHHHHTTHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHh---cCCc----------HHHHHHHHHHHHHhhcch----------HHHHHHHHhccHHHHHHHHHh
Confidence 46666766666654 3333 477788888888887543 399999999988888988888
Q ss_pred CChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhccC--cchhhhhhHHHHHHhhh-HHHHHHHhcchh-
Q 024314 93 LGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDN--KEVALHCGIMLRECIKF-PSLARYILESAS- 168 (269)
Q Consensus 93 L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~~--~dial~~G~mLREcik~-e~la~~iL~~~~- 168 (269)
-+-+...-+-.-|..++-+-.| .+=+..||+.+..+..--.. +.+.-.+..+|.-++-+ |..+..+...-.
T Consensus 172 ~~gN~q~Y~L~AL~~LM~~v~G-----m~gvvs~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~ 246 (339)
T 3dad_A 172 ADHNYQSYILRALGQLMLFVDG-----MLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNS 246 (339)
T ss_dssp SCHHHHHHHHHHHHHHTTSHHH-----HHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHhcccc-----ccchhCCHHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHHHH
Confidence 8777766666666666532111 11244588988888654442 22333344555444433 223332222111
Q ss_pred ---------HHHHhhhcc---CCCchhhhchHHHHHHHHh
Q 024314 169 ---------FELFFKFVE---LPTFDVASDAFSTFKDLLT 196 (269)
Q Consensus 169 ---------f~~fF~yv~---~~~FeiasDAf~TfkelLt 196 (269)
+..+.+.++ .++=|+..-|++-+..+|.
T Consensus 247 v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~amtLIN~lL~ 286 (339)
T 3dad_A 247 VASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLA 286 (339)
T ss_dssp HHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHHHHHHHHHH
T ss_pred hhhccCCCcHHHHHHHHhccCCCCHHHHHHHHHHHHHHHh
Confidence 445555555 5666666666666666655
No 44
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=55.91 E-value=1.2e+02 Score=30.70 Aligned_cols=103 Identities=7% Similarity=-0.003 Sum_probs=62.1
Q ss_pred CCChhhhhhHHHHHHHHhhcccCC-----ccchhhhhhccHHHHHHHHHhccCcchhhhhhHHHHHHhhhHHHHHHHhcc
Q 024314 92 ILGWEARKDLVHCWSILLKQKVDS-----TYCCVQFIENHFELLDFLVVCYDNKEVALHCGIMLRECIKFPSLARYILES 166 (269)
Q Consensus 92 ~L~fE~RKdv~~If~~llr~~~~~-----~~p~v~Yl~~~peil~~L~~gY~~~dial~~G~mLREcik~e~la~~iL~~ 166 (269)
..+-+.|--++.++.+.+++.-.. ..|.-+--.=+..++..|... .+.+.-..|..+...++++--.+ +.
T Consensus 48 ~~~~~vR~~A~i~lkn~i~~~w~~~~~~~~l~~~~k~~ik~~ll~~l~~~--~~~ir~~l~~~ia~ia~~d~p~~---Wp 122 (960)
T 1wa5_C 48 NLPLSTRLAGALFFKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISL--PNNLQVQIGEAISSIADSDFPDR---WP 122 (960)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHSBCSSSCBSSCHHHHHHHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHHHSTTT---CT
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhhCccc---hh
Confidence 347788999999999888754321 122111111134455555542 35666667777766666542211 23
Q ss_pred hhHHHHhhhccCCCchhhhchHHHHHHHHhcch
Q 024314 167 ASFELFFKFVELPTFDVASDAFSTFKDLLTKHL 199 (269)
Q Consensus 167 ~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk 199 (269)
+.+..+++.++.++...--.|+.++.+++.+.+
T Consensus 123 ~ll~~L~~~l~s~~~~~~~~aL~~l~~i~~~~~ 155 (960)
T 1wa5_C 123 TLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWR 155 (960)
T ss_dssp THHHHHHTTCCSSCTTHHHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456677777887777777778888888877543
No 45
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=55.78 E-value=1.5e+02 Score=28.63 Aligned_cols=145 Identities=9% Similarity=0.118 Sum_probs=88.0
Q ss_pred HHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhcc-H-HHHHHHHHhccC--cchhhhhhHHHHHHhhhH
Q 024314 82 VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENH-F-ELLDFLVVCYDN--KEVALHCGIMLRECIKFP 157 (269)
Q Consensus 82 ll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~-p-eil~~L~~gY~~--~dial~~G~mLREcik~e 157 (269)
++..|...+..-+.+.|+.+..++..+..... +++..+ + +++..++.+-.+ +++...+-..+..+++..
T Consensus 225 ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~-------~~~~~~l~~~l~~~~~~~~~~~~~~vr~~a~~~l~~l~~~~ 297 (861)
T 2bpt_A 225 LMQVVCEATQAEDIEVQAAAFGCLCKIMSKYY-------TFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEE 297 (861)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHG-------GGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 45555555666688899999888888876442 223222 3 677777766553 456666666666665543
Q ss_pred H------------------HHHHHhcchhHHHHhhhccC-------CCchhhhchHHHHHHHHhcchhhHHHHHHhhHHH
Q 024314 158 S------------------LARYILESASFELFFKFVEL-------PTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDE 212 (269)
Q Consensus 158 ~------------------la~~iL~~~~f~~fF~yv~~-------~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~ 212 (269)
. ..+-.+ .+.+..+++.+.. ..+.+...|..++..+-.... ..-.+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~il~~ll~~l~~~~~d~~d~~~~~r~~a~~~L~~l~~~~~-------~~~~~~ 369 (861)
T 2bpt_A 298 IDIAYELAQFPQSPLQSYNFALSSI-KDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCG-------NHILEP 369 (861)
T ss_dssp HHHHHHHHHCTTCSCCCCCHHHHHH-HHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHG-------GGGHHH
T ss_pred HhhhhhhhhccCCchhhHHHHHHHH-HHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHHHHcc-------HhHHHH
Confidence 1 111111 2233444444432 345666666666655544221 123445
Q ss_pred HHHHHHhhhcCCCccchhchhhhhHHhhc
Q 024314 213 FFDLYEKLLTSSNYVTRRQSLKLLSEFLL 241 (269)
Q Consensus 213 Ff~~yn~Ll~s~NYVTkRQSLKLLgelLl 241 (269)
++....+++.+++.-.|..++..||.+.-
T Consensus 370 l~~~l~~~l~~~~~~~r~~a~~~l~~i~~ 398 (861)
T 2bpt_A 370 VLEFVEQNITADNWRNREAAVMAFGSIMD 398 (861)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHcCCCChhHHHHHHHHHHHHHc
Confidence 67777788899999999999999999984
No 46
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=55.24 E-value=73 Score=32.85 Aligned_cols=189 Identities=8% Similarity=0.097 Sum_probs=116.8
Q ss_pred HHHHHhhcHHHHHHhhCCCCChhhhhhHHHHHHHHhhccc-----------CCccchhhhhhccHH------HHHHH---
Q 024314 74 ATEVCKEDVLILLVHKLPILGWEARKDLVHCWSILLKQKV-----------DSTYCCVQFIENHFE------LLDFL--- 133 (269)
Q Consensus 74 ~~ei~~~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~-----------~~~~p~v~Yl~~~pe------il~~L--- 133 (269)
...+.+.+.+..|+..|..=+.+.|+.++...+++..... +.-.|.++.|...++ .+..|
T Consensus 529 r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NL 608 (810)
T 3now_A 529 RGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNL 608 (810)
T ss_dssp HHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 3446667778888887777778888888887777764211 101122333322111 11111
Q ss_pred HHhc----------------------cCcchhhhhhHHHHHHhhhHHHHHHHhc-chhHHHHhhhccCCCchhhhchHHH
Q 024314 134 VVCY----------------------DNKEVALHCGIMLRECIKFPSLARYILE-SASFELFFKFVELPTFDVASDAFST 190 (269)
Q Consensus 134 ~~gY----------------------~~~dial~~G~mLREcik~e~la~~iL~-~~~f~~fF~yv~~~~FeiasDAf~T 190 (269)
..+- +++.+--.+-..|.....++.....+.. ...+.-+..+++.++.++...|-.+
T Consensus 609 a~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~A 688 (810)
T 3now_A 609 ASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGA 688 (810)
T ss_dssp TTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHH
Confidence 1110 1222222222222222223332233333 4566777788889999999999888
Q ss_pred HHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhhhHHhhcCCCCHHHHHHhhCChhhHHHHHHhcc
Q 024314 191 FKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLLK 267 (269)
Q Consensus 191 fkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKLLgelLldr~N~~vM~rYis~~~NLkl~M~LLr 267 (269)
+--+-..+...+...+.. ..++...-.||.+++.=+++.++--|+.+.. ++-. ..+||-+..=+..+.+||+
T Consensus 689 LanLt~~s~~~~~~ii~~--~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~--~s~e-~~~~l~e~G~i~~L~~LL~ 760 (810)
T 3now_A 689 LAIITSVSVKCCEKILAI--ASWLDILHTLIANPSPAVQHRGIVIILNMIN--AGEE-IAKKLFETDIMELLSGLGQ 760 (810)
T ss_dssp HHHHHHHCHHHHHHHHTS--TTHHHHHHHHHTCSSHHHHHHHHHHHHHHHT--TCHH-HHHHHHTSTHHHHHTTSCC
T ss_pred HHHHhCCCHHHHHHHHHH--cCCHHHHHHHHCCCCHHHHHHHHHHHHHHHh--CCHH-HHHHHHHCCCHHHHHHHHh
Confidence 888766566666666653 3566777799999999999999999999987 3433 3688888888888888875
No 47
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=51.27 E-value=1.6e+02 Score=29.66 Aligned_cols=150 Identities=14% Similarity=0.189 Sum_probs=78.0
Q ss_pred ChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhccCcch--hhh-hhHHHHHHhhhH-HHH---HHHhcc
Q 024314 94 GWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEV--ALH-CGIMLRECIKFP-SLA---RYILES 166 (269)
Q Consensus 94 ~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~~~di--al~-~G~mLREcik~e-~la---~~iL~~ 166 (269)
+-+....+..++..+.+--.+.-.| |+ |.++..|+.+|.+++. ++- .|.+++. .+.+ .+. ..++.
T Consensus 706 ~~~v~e~~~~~~~~~~~~~~~~~~p---~l---~~~~~~l~~~~~~~~~~~~l~l~~~~i~~-~~~~~~~~~~l~~~~~- 777 (971)
T 2x1g_F 706 EIDVLEAACSAMKHAITNLRSSFQP---ML---QDLCLFIVASFQTRCCAPTLEISKTAIVM-FFKDEGCKPLMQQLLR- 777 (971)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC--CT---HH---HHHHHHHHHHCC--CCHHHHHHHHHHHTT-CCC-----HHHHHHHH-
T ss_pred cHHHHHHHHHHHHHHHHhhhhhccc---cH---HHHHHHHHHHHhcCCchHHHHHHHHHHHH-hCCCcchHHHHHHHHH-
Confidence 3456677777777755422111123 32 7888889999887533 222 2334333 3332 111 11111
Q ss_pred hhHHHHhhhccCC-------CchhhhchHHHHHHHHhcchhhHHHHHHhh-HHHHHHHHHhhhcCCCccchhchhhhhHH
Q 024314 167 ASFELFFKFVELP-------TFDVASDAFSTFKDLLTKHLTVVSEYLTAH-YDEFFDLYEKLLTSSNYVTRRQSLKLLSE 238 (269)
Q Consensus 167 ~~f~~fF~yv~~~-------~FeiasDAf~TfkelLt~Hk~lvaefl~~N-yd~Ff~~yn~Ll~s~NYVTkRQSLKLLge 238 (269)
+.+..+|..+... .=|+.-+.|.-+..++..++..+-. +.. ++.++..--.-+..++..+.|-+++.|..
T Consensus 778 ~~~~~~~~~l~~~~~~~~~~~pd~~~~~f~ll~~~l~~~p~~~~~--s~~~l~~i~~~~~~~l~~~~~~~~~s~~~fl~~ 855 (971)
T 2x1g_F 778 EFIQHSFKLFESTPEQNFSNISDTMETFFGCLTQIIKKIPQVLED--KTLAYDRLVFYAQRGMTLPESGAIRNSIQFLTH 855 (971)
T ss_dssp HHHHHHHHHHTSCTTTHHHHTHHHHHHHHHHHHHHHHSSGGGGGC--TTSCHHHHHHHHHHHHTSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccccCCccCchHHHHHHHHHHHHHHhCcHHHcC--CcccHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 1222333333322 2367777777777777777654421 233 56666655555567888888899999988
Q ss_pred hhcCCCCHHHHHHhh
Q 024314 239 FLLEPPNSHIMKRYI 253 (269)
Q Consensus 239 lLldr~N~~vM~rYi 253 (269)
++-.......+..++
T Consensus 856 ~i~~~~~~~~~~~~~ 870 (971)
T 2x1g_F 856 FVMQSRNHAHVTEVV 870 (971)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHhcCCchHHHHHHH
Confidence 766532334444444
No 48
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=48.04 E-value=1.5e+02 Score=26.24 Aligned_cols=135 Identities=12% Similarity=0.100 Sum_probs=85.3
Q ss_pred HHhhcHHHHHHhhCCC-CChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhc--cCcchhhhhhHHHHHH
Q 024314 77 VCKEDVLILLVHKLPI-LGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCY--DNKEVALHCGIMLREC 153 (269)
Q Consensus 77 i~~~dll~~Li~~l~~-L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY--~~~dial~~G~mLREc 153 (269)
+.+.+.+..|+..|.. -+-+.|+.++-..+++.|.... ..+-+... ..+..|+..- .++++--.+-..|...
T Consensus 120 vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~----~~~~~~~~-ggi~~L~~lL~~~d~~v~~~A~~aLs~L 194 (296)
T 1xqr_A 120 VLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEA----GLLQFLRL-DGFSVLMRAMQQQVQKLKVKSAFLLQNL 194 (296)
T ss_dssp HHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHH----HHHHHHHT-THHHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcH----HHHHHHHC-CCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 4555777888877763 4677899999999999874422 22222221 2333333222 2344433333444443
Q ss_pred hh-hHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHH--hhHHHHHHH
Q 024314 154 IK-FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLT--AHYDEFFDL 216 (269)
Q Consensus 154 ik-~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~--~Nyd~Ff~~ 216 (269)
.. .+...+.+.....+..+++.+..++.+|-.-|..++..+++..+..+.++=. ..+-...++
T Consensus 195 ~~~~~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~l~~lL~~ 260 (296)
T 1xqr_A 195 LVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECREPELGLEELLRH 260 (296)
T ss_dssp HHHCGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTTCHHHHHHHHCGGGCHHHHHHH
T ss_pred HhCChHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHHHhCChhHHHHHhccHHHHHHHHHH
Confidence 33 3556677778888889999999999999999999999999987766665432 235444544
No 49
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=46.05 E-value=1.1e+02 Score=32.13 Aligned_cols=87 Identities=20% Similarity=0.170 Sum_probs=62.9
Q ss_pred cCcchhhhhhHHHHHHhhhHHHHHHHhcchhHHHHhhh----ccCCCchhhhchHHHHHHHHhc-----chhhHHHHHHh
Q 024314 138 DNKEVALHCGIMLRECIKFPSLARYILESASFELFFKF----VELPTFDVASDAFSTFKDLLTK-----HLTVVSEYLTA 208 (269)
Q Consensus 138 ~~~dial~~G~mLREcik~e~la~~iL~~~~f~~fF~y----v~~~~FeiasDAf~TfkelLt~-----Hk~lvaefl~~ 208 (269)
++||.-..-=.+++.++.+-.-+=.-+-++.|..+++. +..+.-||+.-++.++.+++.+ ....+.+|..+
T Consensus 816 ~~Pe~r~~ff~ll~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~~h~~r~~~~~~l~~~~~ll~~~~~~~~~~~~~~f~~~ 895 (1023)
T 4hat_C 816 EYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPFANEFHKN 895 (1023)
T ss_dssp SSHHHHHHHHHHHHHHHHHCTHHHHTSCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHChHHHHcCCHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Confidence 57888888888888887763332222334478888774 4789999999999999999973 23467799999
Q ss_pred hHHHHHHHHHhhhcCC
Q 024314 209 HYDEFFDLYEKLLTSS 224 (269)
Q Consensus 209 Nyd~Ff~~yn~Ll~s~ 224 (269)
.|-.++.+.-..+..+
T Consensus 896 ~~~~~~~~~~~v~td~ 911 (1023)
T 4hat_C 896 YFFIFVSETFFVLTDS 911 (1023)
T ss_dssp HHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhCc
Confidence 9988877766544433
No 50
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=40.38 E-value=67 Score=28.18 Aligned_cols=71 Identities=14% Similarity=0.184 Sum_probs=46.3
Q ss_pred CCChHHHHHHHHHHHHhccccch-hhHHHHHHHHHHHHHHHHHhhhhhcC------------------------------
Q 024314 11 PKTPLEVVKATKVSLMALDIKTV-VEVKALEKAMEEIEKNFVTMRCMLSG------------------------------ 59 (269)
Q Consensus 11 ~ktP~e~Vr~~~e~l~~l~~~~~-~~~~~~~k~~ee~~K~L~~mK~il~G------------------------------ 59 (269)
|+.-..+|+.+.+.|.+++.... .-.++.+++.+++.+.-..++..+-+
T Consensus 122 p~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~ 201 (284)
T 2prs_A 122 PEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTV 201 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCCEEEEESCCHHHHHHHTCCCCEEEES
T ss_pred HHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEECccHHHHHHHCCCeEeEeecc
Confidence 55567889999999999987542 11234455555555544444433321
Q ss_pred CCCCCCCHHHHHHHHHHHHhhc
Q 024314 60 DGEVEPNADQVLQLATEVCKED 81 (269)
Q Consensus 60 ~~e~ep~~e~~~qL~~ei~~~d 81 (269)
.++.||+|.++++|.+.+-..+
T Consensus 202 ~~~~eps~~~l~~l~~~ik~~~ 223 (284)
T 2prs_A 202 NPEIQPGAQRLHEIRTQLVEQK 223 (284)
T ss_dssp STTSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHHcC
Confidence 2467899999999988876554
No 51
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=39.21 E-value=1.4e+02 Score=27.52 Aligned_cols=24 Identities=17% Similarity=0.047 Sum_probs=17.1
Q ss_pred chhhhhhccHHHHHHHHHhccCcc
Q 024314 118 CCVQFIENHFELLDFLVVCYDNKE 141 (269)
Q Consensus 118 p~v~Yl~~~peil~~L~~gY~~~d 141 (269)
+..+++..||+.+..|..+-+.+.
T Consensus 90 ~Gl~~vl~~~~~i~~l~~sL~s~~ 113 (386)
T 2bnx_A 90 FGIKTMLETEEGILLLVRAMDPAV 113 (386)
T ss_dssp HHHHHHHHSSSHHHHHHHTCCTTS
T ss_pred HHHHHHHcCcHHHHHHHHHhCCCC
Confidence 456778888888877777765543
No 52
>1eyh_A Epsin; superhelix of helices, cell cycle; 1.56A {Rattus norvegicus} SCOP: a.118.9.1 PDB: 1h0a_A* 1edu_A
Probab=38.58 E-value=72 Score=25.89 Aligned_cols=95 Identities=14% Similarity=0.178 Sum_probs=51.0
Q ss_pred CCCCCHHHHHHHHHHHHhhcHHH----HHHhhCCCCChhhhhhHHHHHHHHh------hcccCCccchhhhhhccHHHHH
Q 024314 62 EVEPNADQVLQLATEVCKEDVLI----LLVHKLPILGWEARKDLVHCWSILL------KQKVDSTYCCVQFIENHFELLD 131 (269)
Q Consensus 62 e~ep~~e~~~qL~~ei~~~dll~----~Li~~l~~L~fE~RKdv~~If~~ll------r~~~~~~~p~v~Yl~~~peil~ 131 (269)
.-.|.+....+||+..|+.+-+. .|-..|. +..|.-.+||-+|. +. |+.- +|+++..|..+|.
T Consensus 18 ~wGP~~~~m~eIa~~T~~~~~~~~Im~~l~kRL~----d~~k~Wr~vyKaL~lleyLl~n--Gse~-vv~~~~~~~~~i~ 90 (144)
T 1eyh_A 18 PWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLN----DHGKNWRHVYKAMTLMEYLIKT--GSER-VSQQCKENMYAVQ 90 (144)
T ss_dssp SSCCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHS----CCGGGHHHHHHHHHHHHHHHHH--SCHH-HHHHHHHTHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCHhhHHHHHHHHHHHHc----cCCcchHHHhHHHHHHHHHHHh--CCHH-HHHHHHHhhHHHh
Confidence 45688888888888877765333 3333333 24566777777664 21 2222 3444444544454
Q ss_pred HHHHhccCcc-hhhhhhHHHHHHhhhHHHHHHHhcc
Q 024314 132 FLVVCYDNKE-VALHCGIMLRECIKFPSLARYILES 166 (269)
Q Consensus 132 ~L~~gY~~~d-ial~~G~mLREcik~e~la~~iL~~ 166 (269)
.|-. |...| -.--.|.-+|+-. +.+...|-.+
T Consensus 91 ~L~~-F~y~d~~g~D~G~~VR~ka--k~l~~Ll~D~ 123 (144)
T 1eyh_A 91 TLKD-FQYVDRDGKDQGVNVREKA--KQLVALLRDE 123 (144)
T ss_dssp GGGG-CCCBCTTSCBCHHHHHHHH--HHHHHHHHCH
T ss_pred hhcc-ceeeCCCccchHHHHHHHH--HHHHHHHCCH
Confidence 4432 32211 3344677788755 4455544333
No 53
>1oxz_A ADP-ribosylation factor binding protein GGA1; GAT domain, membrane protein; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=38.52 E-value=1.1e+02 Score=26.05 Aligned_cols=15 Identities=27% Similarity=0.384 Sum_probs=7.1
Q ss_pred HHHHHHHHHhhhhhc
Q 024314 44 EEIEKNFVTMRCMLS 58 (269)
Q Consensus 44 ee~~K~L~~mK~il~ 58 (269)
+++..+..-|..+|.
T Consensus 79 e~V~~nv~LL~EML~ 93 (186)
T 1oxz_A 79 EEVNNNVKLLTEMVM 93 (186)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333335555555554
No 54
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=38.30 E-value=68 Score=28.36 Aligned_cols=71 Identities=20% Similarity=0.077 Sum_probs=46.4
Q ss_pred CCChHHHHHHHHHHHHhccccch-hhHHHHHHHHHHHHHHHHHhhhhhcC------------------------------
Q 024314 11 PKTPLEVVKATKVSLMALDIKTV-VEVKALEKAMEEIEKNFVTMRCMLSG------------------------------ 59 (269)
Q Consensus 11 ~ktP~e~Vr~~~e~l~~l~~~~~-~~~~~~~k~~ee~~K~L~~mK~il~G------------------------------ 59 (269)
|+.-..+|+.+.+.|.+++.... .-.++.+++.+++.+.-..++..+-.
T Consensus 127 p~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~ 206 (286)
T 3gi1_A 127 PVLAGEEAVNIAKELGRLDPKHKDSYTKNAKAFKKEAEQLTEEYTQKFKKVRSKTFVTQHTAFSYLAKRFGLKQLGISGI 206 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEESCCHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHCCCeEeecccc
Confidence 55667789999999999987543 11244566666666555555555432
Q ss_pred CCCCCCCHHHHHHHHHHHHhhc
Q 024314 60 DGEVEPNADQVLQLATEVCKED 81 (269)
Q Consensus 60 ~~e~ep~~e~~~qL~~ei~~~d 81 (269)
.++.||++.++++|.+.+-+.+
T Consensus 207 ~~~~eps~~~l~~l~~~ik~~~ 228 (286)
T 3gi1_A 207 SPEQEPSPRQLKEIQDFVKEYN 228 (286)
T ss_dssp CC---CCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHHcC
Confidence 2366899999999998886665
No 55
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=38.30 E-value=1.4e+02 Score=27.52 Aligned_cols=116 Identities=12% Similarity=0.076 Sum_probs=80.9
Q ss_pred HHHHHHHHHhccCcchhhhhhHHHHHHhhh-HHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHH
Q 024314 127 FELLDFLVVCYDNKEVALHCGIMLRECIKF-PSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEY 205 (269)
Q Consensus 127 peil~~L~~gY~~~dial~~G~mLREcik~-e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaef 205 (269)
|.++..|-. +++++-..+-..|+....+ +.....+.....+-.+.+.+..++=++.-.|...++.+...+...-...
T Consensus 5 ~~lv~~L~s--~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i 82 (457)
T 1xm9_A 5 PKAVQYLSS--QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
T ss_dssp HHHHHHHHS--SCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHHCC--CCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 444444443 3566667777777775554 4444477777888888899998988998899999998876544444444
Q ss_pred HHhhHHHHHHHHHhhhc-CCCccchhchhhhhHHhhcCCCCHH
Q 024314 206 LTAHYDEFFDLYEKLLT-SSNYVTRRQSLKLLSEFLLEPPNSH 247 (269)
Q Consensus 206 l~~Nyd~Ff~~yn~Ll~-s~NYVTkRQSLKLLgelLldr~N~~ 247 (269)
.... -....-+||. |++.-+++++.-.|+.|-.+..|..
T Consensus 83 ~~~G---~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~ 122 (457)
T 1xm9_A 83 RRQN---GIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKE 122 (457)
T ss_dssp HHTT---CHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHH
T ss_pred HHcC---CHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHHhHH
Confidence 3332 2344556777 8888888999999998888766655
No 56
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=37.96 E-value=48 Score=26.16 Aligned_cols=45 Identities=13% Similarity=0.199 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHhhcHHH
Q 024314 40 EKAMEEIEKNFVTMRCMLSGDGEVEPNADQVLQLATEVCKEDVLI 84 (269)
Q Consensus 40 ~k~~ee~~K~L~~mK~il~G~~e~ep~~e~~~qL~~ei~~~dll~ 84 (269)
++..+|++|-|..|-.-|-..+=.+|.-+...+|++++-+.|+-.
T Consensus 35 k~~~~D~~KRL~~LfdkLn~~~Ls~~v~~~L~~l~~al~~~dy~~ 79 (118)
T 2yru_A 35 KQVCDDISRRLALLREQWAGGKLSIPVKKRMALLVQELLHHQWDA 79 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCHHH
Confidence 455799999999998877665555556677888888888777644
No 57
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=37.76 E-value=76 Score=27.09 Aligned_cols=138 Identities=9% Similarity=0.074 Sum_probs=71.2
Q ss_pred CCCChhhhhhHHHHHHH-HhhcccCCccchhhhhhccHHHHHHHHHhc-cCcchhhh--hhHHHHHHhhhHHHHHHHhcc
Q 024314 91 PILGWEARKDLVHCWSI-LLKQKVDSTYCCVQFIENHFELLDFLVVCY-DNKEVALH--CGIMLRECIKFPSLARYILES 166 (269)
Q Consensus 91 ~~L~fE~RKdv~~If~~-llr~~~~~~~p~v~Yl~~~peil~~L~~gY-~~~dial~--~G~mLREcik~e~la~~iL~~ 166 (269)
..=+|..||.+..-... ++... .+... --....++++.|..+- .++++... +...| ..+|+-+ ..
T Consensus 26 ~s~~w~eRk~al~~L~~~~~~~~--~~i~~--~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al------~~la~~l-~~ 94 (249)
T 2qk1_A 26 TSSKWKDRVEALEEFWDSVLSQT--KKLKS--TSQNYSNLLGIYGHIIQKDANIQAVALAAQSV------ELICDKL-KT 94 (249)
T ss_dssp TCSSHHHHHHHHHHHHHHTGGGC--CCBCC--TTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHH------HHHHHHH-CT
T ss_pred hcCCHHHHHHHHHHHHHHHHhcC--Ccccc--CcccHHHHHHHHHHHhccCCCHHHHHHHHHHH------HHHHHhc-cc
Confidence 45588899999887777 77421 11110 0112368899998888 56654432 22222 2222211 10
Q ss_pred hhHH---------HHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhhhH
Q 024314 167 ASFE---------LFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKLLS 237 (269)
Q Consensus 167 ~~f~---------~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKLLg 237 (269)
+.|. .+++.+....=.|..-|...+..+...-.+ ++.+ ...+.........|.+.|.=+|.++++.|+
T Consensus 95 ~~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~-~~~~--~~l~~ll~~l~~~l~~k~~~vk~~al~~l~ 171 (249)
T 2qk1_A 95 PGFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDP-LASS--GRNEDMLKDILEHMKHKTPQIRMECTQLFN 171 (249)
T ss_dssp TTSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCT-TCTT--CTTHHHHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccc-cccC--CcHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 1222 233333333333322222222222211000 0000 115567777778889999999999999999
Q ss_pred HhhcC
Q 024314 238 EFLLE 242 (269)
Q Consensus 238 elLld 242 (269)
.++-.
T Consensus 172 ~~~~~ 176 (249)
T 2qk1_A 172 ASMKE 176 (249)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99953
No 58
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=36.75 E-value=58 Score=29.26 Aligned_cols=71 Identities=17% Similarity=0.171 Sum_probs=45.7
Q ss_pred CCChHHHHHHHHHHHHhccccch-hhHHHHHHHHHHHHHHHHHhhhhhc---------------------C---------
Q 024314 11 PKTPLEVVKATKVSLMALDIKTV-VEVKALEKAMEEIEKNFVTMRCMLS---------------------G--------- 59 (269)
Q Consensus 11 ~ktP~e~Vr~~~e~l~~l~~~~~-~~~~~~~k~~ee~~K~L~~mK~il~---------------------G--------- 59 (269)
|+.-..+|+.+.+.|.+++.... .-.++.+++.+++.+.-..++..+- |
T Consensus 138 p~n~~~~a~~I~~~L~~~DP~~a~~Y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yfa~~yGl~~~~~~~~ 217 (312)
T 2o1e_A 138 PVLAQKEVKNITAQIVKQDPDNKEYYEKNSKEYIAKLQDLDKLYRTTAKKAEKKEFITQHTAFGYLAKEYGLKQVPIAGL 217 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCEEEESSCTTHHHHHHTTCEEEECSSC
T ss_pred HHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEECCchHHHHHHCCCeEEEeecc
Confidence 55667889999999999987542 1123445555555544444443332 2
Q ss_pred CCCCCCCHHHHHHHHHHHHhhc
Q 024314 60 DGEVEPNADQVLQLATEVCKED 81 (269)
Q Consensus 60 ~~e~ep~~e~~~qL~~ei~~~d 81 (269)
.++.||+|.++++|.+.+-+.+
T Consensus 218 ~~~~eps~~~l~~l~~~ik~~~ 239 (312)
T 2o1e_A 218 SPDQEPSAASLAKLKTYAKEHN 239 (312)
T ss_dssp CSSSCCCHHHHHHHHHHTTSSC
T ss_pred CCCCCCCHHHHHHHHHHHHHcC
Confidence 2467899999999888775554
No 59
>3onk_A Epsin-3, ENT3; helix, protein transport; 2.09A {Saccharomyces cerevisiae} PDB: 3onl_A
Probab=35.24 E-value=77 Score=25.98 Aligned_cols=101 Identities=12% Similarity=0.113 Sum_probs=60.1
Q ss_pred CCCCCCCHHHHHHHHHHHHhhcHHHHHHhhCCC-CChhhhhhHHHHHHHHh------hcccCCccchhhhhhccHHHHHH
Q 024314 60 DGEVEPNADQVLQLATEVCKEDVLILLVHKLPI-LGWEARKDLVHCWSILL------KQKVDSTYCCVQFIENHFELLDF 132 (269)
Q Consensus 60 ~~e~ep~~e~~~qL~~ei~~~dll~~Li~~l~~-L~fE~RKdv~~If~~ll------r~~~~~~~p~v~Yl~~~peil~~ 132 (269)
++.-.|++....++|+..|+.+-+..+...|.+ |.=...|.-.+||-+|. +. |+. -+|+++..|..+|..
T Consensus 22 nd~wGp~~~~m~eIa~~T~~~~~~~eIm~~l~kRL~d~~~k~WR~vyKaL~lLeyLl~n--Gse-~vv~~~r~~~~~i~~ 98 (150)
T 3onk_A 22 NEPWGASSTLMDQISQGTYNFREREEILSMIFRRFTEKAGSEWRQIYKALQLLDYLIKH--GSE-RFIDDTRNSINLIRI 98 (150)
T ss_dssp SCSSCCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHH--SCH-HHHHHHHTTHHHHHG
T ss_pred CCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHh--CCH-HHHHHHHHHHHHHHh
Confidence 334568889999999998888766554444432 21113455666665543 32 322 357777778888777
Q ss_pred HHHhccCcc-hhhhhhHHHHHHhhhHHHHHHHhcc
Q 024314 133 LVVCYDNKE-VALHCGIMLRECIKFPSLARYILES 166 (269)
Q Consensus 133 L~~gY~~~d-ial~~G~mLREcik~e~la~~iL~~ 166 (269)
|- .|...| -.--.|.-+|+-. +.++..|-.+
T Consensus 99 L~-~F~~~d~~G~D~G~~VR~ka--k~l~~LL~D~ 130 (150)
T 3onk_A 99 LE-TFHYIDSQGRDQGINVRTRV--KALIELLSDD 130 (150)
T ss_dssp GG-GCCCBCTTSCBCHHHHHHHH--HHHHHHHTCH
T ss_pred hh-cccccCCCCCchHHHHHHHH--HHHHHHHcCH
Confidence 64 344333 2455788888755 5566644433
No 60
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=34.20 E-value=77 Score=27.81 Aligned_cols=72 Identities=17% Similarity=0.144 Sum_probs=46.6
Q ss_pred CCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhc---------------------C---------
Q 024314 11 PKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLS---------------------G--------- 59 (269)
Q Consensus 11 ~ktP~e~Vr~~~e~l~~l~~~~~~-~~~~~~k~~ee~~K~L~~mK~il~---------------------G--------- 59 (269)
|+.-..+|+.+.+.|.+++..... -.++.+++.+++.+.-..++..+- |
T Consensus 125 p~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~ 204 (284)
T 3cx3_A 125 PEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIKKAQELTKKFQPKFEKATQKTFVTQHTAFSYLAKRFGLNQLGIAGI 204 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCEEEEESCCHHHHHHTTCCEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHcCCEEeeccCC
Confidence 555678899999999999875421 123445555555544444443332 1
Q ss_pred CCCCCCCHHHHHHHHHHHHhhcH
Q 024314 60 DGEVEPNADQVLQLATEVCKEDV 82 (269)
Q Consensus 60 ~~e~ep~~e~~~qL~~ei~~~dl 82 (269)
.++.||+|.++++|.+.+-+.+.
T Consensus 205 ~~~~eps~~~l~~l~~~ik~~~v 227 (284)
T 3cx3_A 205 SPEQEPSPRQLTEIQEFVKTYKV 227 (284)
T ss_dssp STTCCCCSHHHHHHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHHHHcCC
Confidence 24678999999999988766543
No 61
>1xgw_A Epsin 4; ENTH, enthoprotin, clathrin-associated, endocytosis; 1.90A {Homo sapiens} PDB: 2qy7_A 2v8s_E
Probab=32.86 E-value=75 Score=26.80 Aligned_cols=102 Identities=18% Similarity=0.136 Sum_probs=54.0
Q ss_pred CCCCCCHHHHHHHHHHHHhhcHHHHHHhhCC-CCChhhhhhHHHHHHHHhh--cc--cCCccchhhhhhccHHHHHHHHH
Q 024314 61 GEVEPNADQVLQLATEVCKEDVLILLVHKLP-ILGWEARKDLVHCWSILLK--QK--VDSTYCCVQFIENHFELLDFLVV 135 (269)
Q Consensus 61 ~e~ep~~e~~~qL~~ei~~~dll~~Li~~l~-~L~fE~RKdv~~If~~llr--~~--~~~~~p~v~Yl~~~peil~~L~~ 135 (269)
+.-.|++...++||+..|+.+-+..+..-|. .|-=+..|.-.+||.+|.= += .|+. -+|+++..|-.+|..| .
T Consensus 46 d~wGPs~~~m~eIa~~T~~~~~~~~Im~~L~kRl~~~~~k~WR~vyKaL~LLeYLl~nGse-~vv~~~r~~i~~I~~L-~ 123 (176)
T 1xgw_A 46 DPWGPSGQLMGEIAKATFMYEQFPELMNMLWSRMLKDNKKNWRRVYKSLLLLAYLIRNGSE-RVVTSAREHIYDLRSL-E 123 (176)
T ss_dssp CSSCCCHHHHHHHHHHTTCTTTHHHHHHHHHHHHHSSCTTCHHHHHHHHHHHHHHHHHSCH-HHHHHHHHTHHHHHGG-G
T ss_pred CCCCCCHHHHHHHHHHhcChhhHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHhCCH-HHHHHHHHhHHHHHhh-c
Confidence 3456889999999999888766655544442 2111245677777776640 00 1111 2334444444444444 3
Q ss_pred hccCc-chhhhhhHHHHHHhhhHHHHHHHhcc
Q 024314 136 CYDNK-EVALHCGIMLRECIKFPSLARYILES 166 (269)
Q Consensus 136 gY~~~-dial~~G~mLREcik~e~la~~iL~~ 166 (269)
-|... +-.--.|.-+|+-. +.++..|-.+
T Consensus 124 ~F~y~D~~G~D~G~~VR~kA--k~i~~LL~D~ 153 (176)
T 1xgw_A 124 NYHFVDEHGKDQGINIRQKV--KELVEFAQDD 153 (176)
T ss_dssp GCCCBCTTSCBCHHHHHHHH--HHHHHHHTCH
T ss_pred cCeeECCCCCChHHHHHHHH--HHHHHHHCCH
Confidence 34332 13445777777755 4555544333
No 62
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=32.77 E-value=41 Score=25.59 Aligned_cols=42 Identities=7% Similarity=0.350 Sum_probs=32.6
Q ss_pred hhHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcch-hhHHHHHHhhHHHHHHHHH
Q 024314 155 KFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHL-TVVSEYLTAHYDEFFDLYE 218 (269)
Q Consensus 155 k~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk-~lvaefl~~Nyd~Ff~~yn 218 (269)
++|.+..-+|.||.+..| |..|+ .+..+.+..++.+|.+.+.
T Consensus 20 ~~~~~~~~vl~dP~V~~F----------------------l~~h~~~l~~~~I~~s~~kL~ey~~ 62 (106)
T 2k7r_A 20 RLEQMKEKVMKDQDVQAF----------------------LKENEEVIDQKMIEKSLNKLYEYIE 62 (106)
T ss_dssp HHHHHHHHHTTCHHHHHH----------------------HHHSTTTCCHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHcCHHHHHH----------------------HHHChhhCCHHHHHhhHHHHHHHHH
Confidence 457788888888887765 77888 6888888888888877655
No 63
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=32.74 E-value=1.3e+02 Score=26.97 Aligned_cols=72 Identities=18% Similarity=0.175 Sum_probs=47.1
Q ss_pred CCChHHHHHHHHHHHHhccccch-hhHHHHHHHHHHHHHHHHHhhhhhc-------------------------------
Q 024314 11 PKTPLEVVKATKVSLMALDIKTV-VEVKALEKAMEEIEKNFVTMRCMLS------------------------------- 58 (269)
Q Consensus 11 ~ktP~e~Vr~~~e~l~~l~~~~~-~~~~~~~k~~ee~~K~L~~mK~il~------------------------------- 58 (269)
|+.-..+|+.+.+.|.+++.... .-.++.+++.+++.+.-..++..+-
T Consensus 136 p~n~~~~a~~I~~~L~~~DP~~a~~Y~~Na~~~~~~L~~Ld~~~~~~l~~~p~~~~~~v~~H~af~Yfa~~yGl~~~~~~ 215 (307)
T 3ujp_A 136 PRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMW 215 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCGGGCEEEEEESTTHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCEEEEECchHHHHHHHCCCcEEEee
Confidence 56677889999999999987543 1123445555555444444433322
Q ss_pred C-CCCCCCCHHHHHHHHHHHHhhcH
Q 024314 59 G-DGEVEPNADQVLQLATEVCKEDV 82 (269)
Q Consensus 59 G-~~e~ep~~e~~~qL~~ei~~~dl 82 (269)
| ..+.||+|.++++|.+.+-+.+.
T Consensus 216 ~i~~~~ePs~~~l~~l~~~ik~~~v 240 (307)
T 3ujp_A 216 PINAEQQFTPKQVQTVIEEVKTNNV 240 (307)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHTTTC
T ss_pred ccCCCCCCCHHHHHHHHHHHHhcCC
Confidence 1 34678999999999988876653
No 64
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=32.38 E-value=1.1e+02 Score=24.72 Aligned_cols=96 Identities=5% Similarity=-0.058 Sum_probs=62.3
Q ss_pred CCCHHHHHHHHHHHHhh------cHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHH--H
Q 024314 64 EPNADQVLQLATEVCKE------DVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLV--V 135 (269)
Q Consensus 64 ep~~e~~~qL~~ei~~~------dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~--~ 135 (269)
.|..-...++|+..+++ .++..|..-|.+=+-..+-.+-+|...|++.- ...+++.+..|..+|..|. +
T Consensus 26 ~~pgylm~EIA~~T~~s~~~~~~eim~~L~kRL~~k~~~vk~KaL~lL~yL~~~G---s~~f~~~~r~~~~~Ik~l~~F~ 102 (140)
T 1vdy_A 26 VAPVYKLEEICDLLRSSHVSIVKEFSEFILKRLDNKSPIVKQKALRLIKYAVGKS---GSEFRREMQRNSVAVRNLFHYK 102 (140)
T ss_dssp CCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTTTS---CHHHHHHHHHTTHHHHTTTTCC
T ss_pred CCcHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcCCCcceeehHHHHHHHHHHhC---CHHHHHHHHHhHHHHHHHHhcC
Confidence 34445677888887774 46667777777777666667777777777522 3356788888888888774 3
Q ss_pred hccCcchhhhhhHHHHHHhhhHHHHHHHh
Q 024314 136 CYDNKEVALHCGIMLRECIKFPSLARYIL 164 (269)
Q Consensus 136 gY~~~dial~~G~mLREcik~e~la~~iL 164 (269)
|..+|--.---|...|+-. ..+...|.
T Consensus 103 g~~dp~~G~d~g~~VR~~A--kEl~~ll~ 129 (140)
T 1vdy_A 103 GHPDPLKGDALNKAVRETA--HETISAIF 129 (140)
T ss_dssp CCCCTTTSSCHHHHHHHHH--HHHHHHHT
T ss_pred CCCCcccccchhHHHHHHH--HHHHHHHh
Confidence 3434434556778888766 34444443
No 65
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=32.26 E-value=2.5e+02 Score=24.45 Aligned_cols=107 Identities=12% Similarity=0.066 Sum_probs=55.9
Q ss_pred cHHHHHHHHHhccCc--chhh--hhhHHHHHHhh---hHHHHHHHhcchhHHHHhhhccCC--CchhhhchHHHHHHHHh
Q 024314 126 HFELLDFLVVCYDNK--EVAL--HCGIMLRECIK---FPSLARYILESASFELFFKFVELP--TFDVASDAFSTFKDLLT 196 (269)
Q Consensus 126 ~peil~~L~~gY~~~--dial--~~G~mLREcik---~e~la~~iL~~~~f~~fF~yv~~~--~FeiasDAf~TfkelLt 196 (269)
-|+++..|+....++ +... .+-..|+..++ .+.+..++ .+.+..+...++.+ +=+|-.-|..++..++.
T Consensus 126 w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~--~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~ 203 (462)
T 1ibr_B 126 WPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS--NEILTAIIQGMRKEEPSNNVKLAATNALLNSLE 203 (462)
T ss_dssp CTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGH--HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHH--HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Confidence 388888888877655 3222 11122222222 11111000 12333444556555 56666666666666542
Q ss_pred cchhhHHHHHHhhH-----HH-HHHHHHhhhcCCCccchhchhhhhHHhhcC
Q 024314 197 KHLTVVSEYLTAHY-----DE-FFDLYEKLLTSSNYVTRRQSLKLLSEFLLE 242 (269)
Q Consensus 197 ~Hk~lvaefl~~Ny-----d~-Ff~~yn~Ll~s~NYVTkRQSLKLLgelLld 242 (269)
|+..+. .. +.....+++.+++--.|+++++.|+++...
T Consensus 204 --------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~ 247 (462)
T 1ibr_B 204 --------FTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSL 247 (462)
T ss_dssp --------TTHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHH
T ss_pred --------HHHHhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 111111 11 233444577888888899999999988753
No 66
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=31.10 E-value=1e+02 Score=27.16 Aligned_cols=71 Identities=18% Similarity=0.146 Sum_probs=46.3
Q ss_pred CCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhcCC----------------------------C
Q 024314 11 PKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLSGD----------------------------G 61 (269)
Q Consensus 11 ~ktP~e~Vr~~~e~l~~l~~~~~~-~~~~~~k~~ee~~K~L~~mK~il~G~----------------------------~ 61 (269)
|+.-..+|+.+.+.|.+++..... -.++.+++.+++.+.-..++..+-+- .
T Consensus 138 p~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~ 217 (291)
T 1pq4_A 138 PTLVKRQATTIAKELAELDPDNRDQYEANLAAFLAELERLNQELGQILQPLPQRKFIVFHPSWAYFARDYNLVQIPIEVE 217 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEESSCCCHHHHHHTTCEEEESCBT
T ss_pred HHHHHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEECCchHHHHHHCCCEEeecccC
Confidence 566678899999999999875431 13345566666655555555444321 2
Q ss_pred CCCCCHHHHHHHHHHHHhhc
Q 024314 62 EVEPNADQVLQLATEVCKED 81 (269)
Q Consensus 62 e~ep~~e~~~qL~~ei~~~d 81 (269)
+.+|+|.++++|.+.+-..+
T Consensus 218 ~~eps~~~l~~l~~~ik~~~ 237 (291)
T 1pq4_A 218 GQEPSAQELKQLIDTAKENN 237 (291)
T ss_dssp TBCCCHHHHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHHHHHcC
Confidence 46788888888887775554
No 67
>1inz_A EPS15-interacting portein(epsin); alpha-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.118.9.1
Probab=30.92 E-value=45 Score=27.26 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=48.7
Q ss_pred CCCCCHHHHHHHHHHHHhhcHHH----HHHhhCCCCChhhhhhHHHHHHHHh------hcccCCccchhhhhhccHHHHH
Q 024314 62 EVEPNADQVLQLATEVCKEDVLI----LLVHKLPILGWEARKDLVHCWSILL------KQKVDSTYCCVQFIENHFELLD 131 (269)
Q Consensus 62 e~ep~~e~~~qL~~ei~~~dll~----~Li~~l~~L~fE~RKdv~~If~~ll------r~~~~~~~p~v~Yl~~~peil~ 131 (269)
.-.|.+...++||+..|+.+-+. .|-..|. +..|.-.+||.+|. +. |+. -+|+++..|..+|.
T Consensus 36 ~wGP~~~~m~eIa~~T~~~~~~~eIm~~l~kRL~----d~~k~WR~vyKaL~lleyLl~n--Gse-~vv~~~r~~~~~I~ 108 (148)
T 1inz_A 36 PWGPSSSLMSEIADLTYNVVAFSEIMSMIWKRLN----DHGKNWRHVYKAMTLMEYLIKT--GSE-RVSQQCKENMYAVQ 108 (148)
T ss_dssp SCCCCSCHHHHHHHHHTSSHHHHHHHHHHHHGGG----CCSSCTHHHHHHHHHHHHHHHT--TCH-HHHHHHHHTHHHHH
T ss_pred CCCcCHHHHHHHHHHhCCHhhHHHHHHHHHHHHc----cCCcchhHhhHHHHHHHHHHHh--CCH-HHHHHHHHhHHHHH
Confidence 34577778888888887765333 3333332 23455556665553 32 322 24555555655666
Q ss_pred HHHHh-ccCcchhhhhhHHHHHHhhhHHHHH
Q 024314 132 FLVVC-YDNKEVALHCGIMLRECIKFPSLAR 161 (269)
Q Consensus 132 ~L~~g-Y~~~dial~~G~mLREcik~e~la~ 161 (269)
.|-.- |-++ -.--.|.-+|+-. +.+..
T Consensus 109 ~L~~F~y~d~-~g~D~G~nVR~kA--k~l~~ 136 (148)
T 1inz_A 109 TLKDFQYVDR-DGKDQGVNVREKA--KQLVA 136 (148)
T ss_dssp HHHHCCCCCS-SCCCCCHHHHHHH--HHHHH
T ss_pred hhcceeeeCC-CCcCchHHHHHHH--HHHHH
Confidence 66431 2221 2344677788755 34444
No 68
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=29.31 E-value=1.2e+02 Score=26.78 Aligned_cols=72 Identities=19% Similarity=0.125 Sum_probs=47.1
Q ss_pred CCChHHHHHHHHHHHHhccccch-hhHHHHHHHHHHHHHHHHHhhhhhcC------------------------------
Q 024314 11 PKTPLEVVKATKVSLMALDIKTV-VEVKALEKAMEEIEKNFVTMRCMLSG------------------------------ 59 (269)
Q Consensus 11 ~ktP~e~Vr~~~e~l~~l~~~~~-~~~~~~~k~~ee~~K~L~~mK~il~G------------------------------ 59 (269)
|+.-..+|+.+.+.|.+++.... .-.++.+++.+++.+.-.+++..+-+
T Consensus 129 p~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~ 208 (294)
T 3hh8_A 129 LENGIIYSKNIAKQLIAKDPKNKETYEKNLKAYVAKLEKLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYIW 208 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCGGGCCEEEEESCCHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccCcEEEEECChHHHHHHHcCCceeecc
Confidence 55667889999999999987543 11234455555555555554443332
Q ss_pred --CCCCCCCHHHHHHHHHHHHhhcH
Q 024314 60 --DGEVEPNADQVLQLATEVCKEDV 82 (269)
Q Consensus 60 --~~e~ep~~e~~~qL~~ei~~~dl 82 (269)
.++.||+|.++++|.+.+-+.+.
T Consensus 209 ~~~~~~eps~~~l~~l~~~ik~~~v 233 (294)
T 3hh8_A 209 EINTEEEGTPDQISSLIEKLKVIKP 233 (294)
T ss_dssp SSCCSCCCCHHHHHHHHHHHHHSCC
T ss_pred ccCCCCCCCHHHHHHHHHHHHHcCC
Confidence 13568899999988888766553
No 69
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=29.01 E-value=1.3e+02 Score=26.43 Aligned_cols=71 Identities=13% Similarity=0.031 Sum_probs=42.6
Q ss_pred CCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhc-----------C-------------------
Q 024314 11 PKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLS-----------G------------------- 59 (269)
Q Consensus 11 ~ktP~e~Vr~~~e~l~~l~~~~~~-~~~~~~k~~ee~~K~L~~mK~il~-----------G------------------- 59 (269)
|+.-..+|+.+.+.|.+++..... -.++.+++.+++.+.-..++..+- .
T Consensus 109 p~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~~ 188 (282)
T 3mfq_A 109 IPLYKSAVAVASEELQKLLPAKAEMIQKNTEKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQ 188 (282)
T ss_dssp HHHHHHHHHHHHHHHTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECSS
T ss_pred HHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEeccc
Confidence 566678899999999999865421 123334444444333333332221 1
Q ss_pred --CCCCCCCHHHHHHHHHHHHhhc
Q 024314 60 --DGEVEPNADQVLQLATEVCKED 81 (269)
Q Consensus 60 --~~e~ep~~e~~~qL~~ei~~~d 81 (269)
..+.||+|.++++|.+.+-+.+
T Consensus 189 ~~~~~~eps~~~l~~l~~~ik~~~ 212 (282)
T 3mfq_A 189 GVSTDSEVANSDMIETVNLIIDHN 212 (282)
T ss_dssp CSSSCSCCCHHHHHHHHHHHHHHT
T ss_pred ccCCCCCCCHHHHHHHHHHHHHcC
Confidence 1356788888888888776554
No 70
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=28.20 E-value=1.6e+02 Score=31.27 Aligned_cols=86 Identities=13% Similarity=0.190 Sum_probs=60.7
Q ss_pred cCcchhhhhhHHHHHHhhhHHHHHHHhc--chhHHHHhh---h-ccCCCchhhhchHHHHHHHHhc---chhhHHHHHHh
Q 024314 138 DNKEVALHCGIMLRECIKFPSLARYILE--SASFELFFK---F-VELPTFDVASDAFSTFKDLLTK---HLTVVSEYLTA 208 (269)
Q Consensus 138 ~~~dial~~G~mLREcik~e~la~~iL~--~~~f~~fF~---y-v~~~~FeiasDAf~TfkelLt~---Hk~lvaefl~~ 208 (269)
++||.-..-=..||.++.|-. ..+|. .+.|..+++ | +..+.-||+.-+..++.+++.+ +...+.+|..+
T Consensus 842 ~~Pe~r~~ff~ll~~~~~~~f--~~l~~l~~~~~~~~i~~i~wa~kh~~r~i~~~~l~~~~~ll~~~~~~~~~~~~F~~~ 919 (1073)
T 3gjx_A 842 EYPEHRTNFFLLLQAVNSHCF--PAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQT 919 (1073)
T ss_dssp SCHHHHHHHHHHHHHHHHHCG--GGTTTSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHh--HHHHcCCHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHhhcChHHHHHHHHH
Confidence 467777776677777776622 22333 456666665 3 3799999999999999999975 55677799999
Q ss_pred hHHHHHHHHHhhhcCCC
Q 024314 209 HYDEFFDLYEKLLTSSN 225 (269)
Q Consensus 209 Nyd~Ff~~yn~Ll~s~N 225 (269)
.|-.+..+.-..+....
T Consensus 920 ~~~~~~~~i~~v~td~~ 936 (1073)
T 3gjx_A 920 YFCDILQHIFSVVTDTS 936 (1073)
T ss_dssp HHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhCch
Confidence 98888766555444433
No 71
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=27.46 E-value=1.3e+02 Score=26.93 Aligned_cols=71 Identities=20% Similarity=0.084 Sum_probs=44.6
Q ss_pred CCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhc-----------------------C-------
Q 024314 11 PKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLS-----------------------G------- 59 (269)
Q Consensus 11 ~ktP~e~Vr~~~e~l~~l~~~~~~-~~~~~~k~~ee~~K~L~~mK~il~-----------------------G------- 59 (269)
|+.-..+|+.+.+.|.+++..... -.++.+++.+++.+.-..++..+- |
T Consensus 143 p~n~~~~a~~I~~~L~~~DP~~a~~Y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yGl~~~~~~ 222 (313)
T 1toa_A 143 VKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQ 222 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCCCeEEEee
Confidence 556678899999999999875421 123334444444433333333222 1
Q ss_pred --CCCCCCCHHHHHHHHHHHHhhc
Q 024314 60 --DGEVEPNADQVLQLATEVCKED 81 (269)
Q Consensus 60 --~~e~ep~~e~~~qL~~ei~~~d 81 (269)
.++.||+|.++++|.+.+-..+
T Consensus 223 ~~~~~~eps~~~l~~l~~~ik~~~ 246 (313)
T 1toa_A 223 GVSTASEASAHDMQELAAFIAQRK 246 (313)
T ss_dssp CSSCSSCCCHHHHHHHHHHHHHTT
T ss_pred ccCCCCCCCHHHHHHHHHHHHHcC
Confidence 2477899999999998876654
No 72
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=24.95 E-value=1.6e+02 Score=26.44 Aligned_cols=71 Identities=18% Similarity=0.197 Sum_probs=45.0
Q ss_pred CCChHHHHHHHHHHHHhccccchh-hHHHHHHHHHHHHHHHHHhhhhhc-----------------------C-------
Q 024314 11 PKTPLEVVKATKVSLMALDIKTVV-EVKALEKAMEEIEKNFVTMRCMLS-----------------------G------- 59 (269)
Q Consensus 11 ~ktP~e~Vr~~~e~l~~l~~~~~~-~~~~~~k~~ee~~K~L~~mK~il~-----------------------G------- 59 (269)
|+.-..+|+.+.+.|.+++..+.. -.++.+++.+++.+.-..++..+- |
T Consensus 150 p~n~~~~a~~I~~~L~~~DP~~a~~Y~~Na~~~~~~L~~Ld~~~~~~l~~~~~~~r~~v~~H~af~Yfa~~yGL~~~~~~ 229 (321)
T 1xvl_A 150 PRNALVYVENIRQAFVELDPDNAKYYNANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMW 229 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCEEEEECchHHHHHHHCCCeEEEee
Confidence 556678899999999999875421 123444455444443333333221 1
Q ss_pred --CCCCCCCHHHHHHHHHHHHhhc
Q 024314 60 --DGEVEPNADQVLQLATEVCKED 81 (269)
Q Consensus 60 --~~e~ep~~e~~~qL~~ei~~~d 81 (269)
.++.||+|.++++|.+.+-+.+
T Consensus 230 ~~~~~~eps~~~l~~l~~~ik~~~ 253 (321)
T 1xvl_A 230 PINAEQQFTPKQVQTVIEEVKTNN 253 (321)
T ss_dssp SSSSSCSCCHHHHHHHHHHHHTTT
T ss_pred ccCCCCCCCHHHHHHHHHHHHHcC
Confidence 2467899999999988876655
No 73
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=24.31 E-value=4.6e+02 Score=24.81 Aligned_cols=137 Identities=17% Similarity=0.161 Sum_probs=78.3
Q ss_pred HHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHH----HHHHHhccCcchhhhhhHHHHHH--hh
Q 024314 82 VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELL----DFLVVCYDNKEVALHCGIMLREC--IK 155 (269)
Q Consensus 82 ll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil----~~L~~gY~~~dial~~G~mLREc--ik 155 (269)
++..++..++.=+++.||-+..-...+.+. +||.+ ..+.+.-.+++-. .-|.-||-. +.
T Consensus 50 ~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~--------------~~e~~~l~~n~l~kdL~~~n~~-ir~~AL~~L~~i~ 114 (591)
T 2vgl_B 50 LFPDVVNCMQTDNLELKKLVYLYLMNYAKS--------------QPDMAIMAVNSFVKDCEDPNPL-IRALAVRTMGCIR 114 (591)
T ss_dssp GHHHHHHTTSSSCHHHHHHHHHHHHHHHHH--------------SHHHHHTTHHHHGGGSSSSSHH-HHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHccc--------------CchHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHcCC
Confidence 455566677777888888776666655432 24432 2333333443321 112222221 11
Q ss_pred hHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchhhh
Q 024314 156 FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSLKL 235 (269)
Q Consensus 156 ~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSLKL 235 (269)
.+.+++.+. -.+.+.+..++-.|-.-|...+-.+....+.++-+ +.++....++|.++|...++.++..
T Consensus 115 ~~~~~~~l~-----~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~~------~~~~~~l~~lL~d~d~~V~~~A~~a 183 (591)
T 2vgl_B 115 VDKITEYLC-----EPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVED------QGFLDSLRDLIADSNPMVVANAVAA 183 (591)
T ss_dssp SGGGHHHHH-----HHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHHH------HHHHHHHHHTTSCSCHHHHHHHHHH
T ss_pred hHHHHHHHH-----HHHHHHcCCCChHHHHHHHHHHHHHHhhChhhccc------ccHHHHHHHHhCCCChhHHHHHHHH
Confidence 222333222 11233345556666556666665555544544422 4688899999999999999999999
Q ss_pred hHHhhcCCC
Q 024314 236 LSEFLLEPP 244 (269)
Q Consensus 236 LgelLldr~ 244 (269)
|+++--+.+
T Consensus 184 L~~i~~~~~ 192 (591)
T 2vgl_B 184 LSEISESHP 192 (591)
T ss_dssp HHHHTTSCC
T ss_pred HHHHHhhCC
Confidence 999987654
No 74
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=22.89 E-value=6.3e+02 Score=25.94 Aligned_cols=148 Identities=11% Similarity=0.126 Sum_probs=78.6
Q ss_pred HHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhccCc----chhhhhhHHHHHHhh--
Q 024314 82 VLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNK----EVALHCGIMLRECIK-- 155 (269)
Q Consensus 82 ll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~~~----dial~~G~mLREcik-- 155 (269)
++..+...+..=+...|..+...++.+.....+. . ..| -++++..++..-+++ ++...+-..+...++
T Consensus 435 ll~~l~~~l~~~~~~vr~~~~~~L~~l~~~~~~~-l--~~~---l~~ll~~l~~~L~d~~~~~~v~~~a~~~l~~~~~~~ 508 (1230)
T 1u6g_C 435 IVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGA-L--TQH---IPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNH 508 (1230)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTT-T--GGG---HHHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHchhh-h--HHH---HHHHHHHHHHHHcCCCCcchHHHHHHHHHHHHHHhC
Confidence 4445555577777788888888888777652211 1 122 267777777666554 222222222222221
Q ss_pred -hHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcch-------hhHHHHHHhhHHHHHHHHHhhh--cCCC
Q 024314 156 -FPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHL-------TVVSEYLTAHYDEFFDLYEKLL--TSSN 225 (269)
Q Consensus 156 -~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk-------~lvaefl~~Nyd~Ff~~yn~Ll--~s~N 225 (269)
.+.+..++ .+.+-.++..++.++..|.+.|..++.++...-. .-...|+ +.++...-+.+ .+++
T Consensus 509 ~~~~~~~~l--~~llp~L~~~l~d~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~----~~ll~~ll~~l~~~d~~ 582 (1230)
T 1u6g_C 509 SPQVFHPHV--QALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYI----KDLFTCTIKRLKAADID 582 (1230)
T ss_dssp CGGGGHHHH--TTTHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCCSSSCCCCCCHHHH----HHHHHHHHHHHSCSSSC
T ss_pred CHHHHHhHH--HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCcccccccchHHHH----HHHHHHHHHHHhccCCC
Confidence 11111111 1233344556778888898888888887773211 1122333 33333333334 4566
Q ss_pred ccchhchhhhhHHhhc
Q 024314 226 YVTRRQSLKLLSEFLL 241 (269)
Q Consensus 226 YVTkRQSLKLLgelLl 241 (269)
+-.|..++..||.+..
T Consensus 583 ~~vr~~a~~~lg~L~~ 598 (1230)
T 1u6g_C 583 QEVKERAISCMGQIIC 598 (1230)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6677777777777653
No 75
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=20.91 E-value=4.6e+02 Score=23.61 Aligned_cols=142 Identities=10% Similarity=0.034 Sum_probs=81.1
Q ss_pred hcHHHHHHhhCCCCChhhhhhHHHHHHHHhhcccCCccchhhhhhccHHHHHHHHHhccCcch-----hh-hhhHHHHHH
Q 024314 80 EDVLILLVHKLPILGWEARKDLVHCWSILLKQKVDSTYCCVQFIENHFELLDFLVVCYDNKEV-----AL-HCGIMLREC 153 (269)
Q Consensus 80 ~dll~~Li~~l~~L~fE~RKdv~~If~~llr~~~~~~~p~v~Yl~~~peil~~L~~gY~~~di-----al-~~G~mLREc 153 (269)
..++..++..+..=++..|..+...+..+.+.- |.. . -.|.++..++.+-.+++- |. ..|.+...
T Consensus 401 ~~~lp~l~~~~~d~~~~vr~~~~~~l~~l~~~~-~~~-----~--~~~~l~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~- 471 (588)
T 1b3u_A 401 QSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQL-GVE-----F--FDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEK- 471 (588)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH-CGG-----G--CCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHc-CHH-----H--HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH-
Confidence 456777777777777888888877777766422 211 1 136778888777666532 11 22222221
Q ss_pred hhhHHHHHHHhcchhHHHHhhhccCCCchhhhchHHHHHHHHhcchhhHHHHHHhhHHHHHHHHHhhhcCCCccchhchh
Q 024314 154 IKFPSLARYILESASFELFFKFVELPTFDVASDAFSTFKDLLTKHLTVVSEYLTAHYDEFFDLYEKLLTSSNYVTRRQSL 233 (269)
Q Consensus 154 ik~e~la~~iL~~~~f~~fF~yv~~~~FeiasDAf~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn~Ll~s~NYVTkRQSL 233 (269)
+..+... +..+-.+.+..+.++..+-.-|..++..+..... .++ ..+.++...-+++..++--.|..++
T Consensus 472 ~~~~~~~-----~~llp~l~~~~~~~~~~~R~~a~~~l~~l~~~~~---~~~---~~~~~~~~l~~~l~d~~~~Vr~~a~ 540 (588)
T 1b3u_A 472 FGKEWAH-----ATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG---QDI---TTKHMLPTVLRMAGDPVANVRFNVA 540 (588)
T ss_dssp HCHHHHH-----HHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HHH---HHHHTHHHHHHGGGCSCHHHHHHHH
T ss_pred hCchhHH-----HHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHhcC---HHH---HHHHHHHHHHhhCCCCCchHHHHHH
Confidence 1111111 1112223334566777776666666655543211 111 2345666666778888888999999
Q ss_pred hhhHHhhc
Q 024314 234 KLLSEFLL 241 (269)
Q Consensus 234 KLLgelLl 241 (269)
+.||++..
T Consensus 541 ~~l~~l~~ 548 (588)
T 1b3u_A 541 KSLQKIGP 548 (588)
T ss_dssp HHHHHHGG
T ss_pred HHHHHHHH
Confidence 99999874
No 76
>1f6f_A Placental lactogen; 4-helical bundle, alpha helical bundle, ternary complex, FN III domains, beta sheet domains, cytokine-receptor complex; 2.30A {Ovis aries} SCOP: a.26.1.1
Probab=20.21 E-value=1.1e+02 Score=26.15 Aligned_cols=78 Identities=13% Similarity=0.201 Sum_probs=50.6
Q ss_pred HHHHHHHHhcchhhHHHHHHhhHHHHHHHHH-hhhcCCCccchhchhhhhHHhhcCCCCHHHHHHhhCChhhHHHHHHhc
Q 024314 188 FSTFKDLLTKHLTVVSEYLTAHYDEFFDLYE-KLLTSSNYVTRRQSLKLLSEFLLEPPNSHIMKRYILEVRFLKVMMTLL 266 (269)
Q Consensus 188 f~TfkelLt~Hk~lvaefl~~Nyd~Ff~~yn-~Ll~s~NYVTkRQSLKLLgelLldr~N~~vM~rYis~~~NLkl~M~LL 266 (269)
...+.+||.+ -...|+.+..--.+.|..|. ++...+.|+.|+.+ ==.+-|-.+.|..=-.+ +++.+-|+++.+||
T Consensus 15 ~~~l~~Lfd~-Av~~s~~ih~Ls~~~~~eFe~~~~~~~~~~~~~~~--ChT~si~tP~~keeaqq-~s~~~LL~~~l~Ll 90 (199)
T 1f6f_A 15 QIPLQSLFDR-ATTVANYNSKLAGEMVNRFDEQYGQGINSESKVIN--CHTSSITTPNSKAEAIN-TEDKILFKLVISLL 90 (199)
T ss_dssp CCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTC---------CCC--CGGGGSCCCCSHHHHHH-SCHHHHHHHHHHHH
T ss_pred CCcHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCcccccccCCCC--CccCCcCCCCCHHHHhc-CCHHHHHHHHHHHH
Confidence 3457777774 55566777776677777765 47777777777666 55667777777776555 89999999999999
Q ss_pred ccC
Q 024314 267 KVF 269 (269)
Q Consensus 267 r~~ 269 (269)
.-|
T Consensus 91 ~sW 93 (199)
T 1f6f_A 91 HSW 93 (199)
T ss_dssp HTT
T ss_pred HHH
Confidence 888
Done!