Query 024317
Match_columns 269
No_of_seqs 173 out of 1702
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:09:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024317hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kya_A Putative phosphatase; s 99.9 3.3E-23 1.1E-27 193.0 17.5 150 45-195 310-480 (496)
2 3kya_A Putative phosphatase; s 99.9 3.8E-22 1.3E-26 185.8 18.0 185 44-242 246-471 (496)
3 4hw6_A Hypothetical protein, I 99.9 2.9E-21 9.8E-26 178.3 19.4 178 43-239 226-427 (433)
4 3fvz_A Peptidyl-glycine alpha- 99.9 8.7E-20 3E-24 161.5 24.0 195 31-242 79-319 (329)
5 3hrp_A Uncharacterized protein 99.9 5.2E-20 1.8E-24 168.5 22.8 182 43-239 217-404 (409)
6 3tc9_A Hypothetical hydrolase; 99.9 2.4E-20 8.3E-25 171.9 19.6 180 43-239 224-424 (430)
7 3fvz_A Peptidyl-glycine alpha- 99.8 1.4E-19 4.9E-24 160.0 22.1 171 42-240 21-222 (329)
8 4hw6_A Hypothetical protein, I 99.8 1.8E-20 6E-25 173.0 16.6 144 45-189 273-432 (433)
9 3hrp_A Uncharacterized protein 99.8 5E-20 1.7E-24 168.7 18.8 138 46-189 267-409 (409)
10 3tc9_A Hypothetical hydrolase; 99.8 9.6E-20 3.3E-24 167.9 14.1 144 45-189 270-429 (430)
11 3v64_C Agrin; beta propeller, 99.8 6.1E-19 2.1E-23 158.1 18.5 153 43-240 114-270 (349)
12 3v64_C Agrin; beta propeller, 99.8 4.2E-18 1.4E-22 152.7 23.3 154 43-240 71-229 (349)
13 3sov_A LRP-6, low-density lipo 99.8 1.5E-18 5.3E-23 153.8 19.4 152 43-240 77-233 (318)
14 3v65_B Low-density lipoprotein 99.8 4.4E-18 1.5E-22 154.5 22.3 153 43-240 114-272 (386)
15 3v65_B Low-density lipoprotein 99.8 1.9E-18 6.5E-23 157.0 19.6 151 43-240 157-313 (386)
16 1ijq_A LDL receptor, low-densi 99.8 4E-18 1.4E-22 150.7 20.1 154 43-240 75-233 (316)
17 1ijq_A LDL receptor, low-densi 99.8 1E-17 3.4E-22 148.1 21.4 155 43-239 28-189 (316)
18 3p5b_L Low density lipoprotein 99.8 9.1E-18 3.1E-22 153.2 20.5 154 43-240 157-315 (400)
19 3p5b_L Low density lipoprotein 99.8 8.1E-18 2.8E-22 153.6 20.1 156 43-240 110-272 (400)
20 1npe_A Nidogen, entactin; glyc 99.8 2.2E-17 7.4E-22 141.5 20.6 152 45-241 36-194 (267)
21 3m0c_C LDL receptor, low-densi 99.8 1.1E-17 3.9E-22 164.3 21.0 154 43-240 469-627 (791)
22 3sov_A LRP-6, low-density lipo 99.8 1.7E-17 5.8E-22 147.0 19.7 154 44-240 34-192 (318)
23 1q7f_A NHL, brain tumor CG1071 99.8 4.4E-17 1.5E-21 140.1 21.8 153 43-239 119-274 (286)
24 3m0c_C LDL receptor, low-densi 99.8 1.8E-17 6.1E-22 162.9 21.5 155 43-239 422-583 (791)
25 1npe_A Nidogen, entactin; glyc 99.8 2.3E-17 7.8E-22 141.4 19.3 153 43-242 77-235 (267)
26 1q7f_A NHL, brain tumor CG1071 99.8 1.2E-16 4.2E-21 137.4 23.3 156 43-241 75-234 (286)
27 3s94_A LRP-6, low-density lipo 99.8 2E-17 6.9E-22 158.9 19.2 151 43-239 390-545 (619)
28 3s94_A LRP-6, low-density lipo 99.8 4.5E-17 1.5E-21 156.5 20.7 153 43-241 38-198 (619)
29 4a0p_A LRP6, LRP-6, low-densit 99.8 3.5E-17 1.2E-21 157.4 19.9 147 43-235 387-538 (628)
30 4a0p_A LRP6, LRP-6, low-densit 99.7 5.9E-17 2E-21 155.9 19.2 149 43-240 78-232 (628)
31 1rwi_B Serine/threonine-protei 99.7 3.7E-16 1.2E-20 132.8 16.4 151 44-240 107-259 (270)
32 2fp8_A Strictosidine synthase; 99.7 1E-15 3.6E-20 134.6 17.6 149 45-235 80-248 (322)
33 1n7d_A LDL receptor, low-densi 99.7 1.4E-16 4.7E-21 155.2 12.4 155 43-241 451-610 (699)
34 1rwi_B Serine/threonine-protei 99.7 2.6E-15 8.9E-20 127.5 17.2 153 43-242 65-219 (270)
35 2qc5_A Streptogramin B lactona 99.6 2.9E-14 1E-18 122.1 22.0 153 44-242 103-257 (300)
36 1n7d_A LDL receptor, low-densi 99.6 1.7E-16 5.8E-21 154.5 8.8 157 43-239 404-565 (699)
37 2qc5_A Streptogramin B lactona 99.6 2E-14 7E-19 123.1 20.7 150 43-239 144-294 (300)
38 2z2n_A Virginiamycin B lyase; 99.6 1.5E-13 5.3E-18 117.5 21.6 154 43-242 97-252 (299)
39 3e5z_A Putative gluconolactona 99.6 2.8E-13 9.6E-18 117.0 22.4 153 44-242 68-243 (296)
40 2z2n_A Virginiamycin B lyase; 99.6 2.8E-13 9.6E-18 115.9 21.2 150 44-240 140-290 (299)
41 2ism_A Putative oxidoreductase 99.6 4.1E-14 1.4E-18 126.8 16.4 177 30-237 19-224 (352)
42 3dr2_A Exported gluconolactona 99.6 1.8E-13 6.3E-18 119.3 17.7 150 44-235 85-258 (305)
43 2p4o_A Hypothetical protein; p 99.6 5.5E-13 1.9E-17 116.5 20.7 161 45-242 72-239 (306)
44 2fp8_A Strictosidine synthase; 99.5 1.7E-13 5.6E-18 120.5 16.5 150 43-239 124-307 (322)
45 3a9g_A Putative uncharacterize 99.5 5.4E-13 1.9E-17 119.7 19.9 177 23-237 10-219 (354)
46 3e5z_A Putative gluconolactona 99.5 7.1E-13 2.4E-17 114.5 19.8 166 27-241 13-198 (296)
47 3dr2_A Exported gluconolactona 99.5 4.6E-13 1.6E-17 116.8 18.6 156 31-235 34-208 (305)
48 3g4e_A Regucalcin; six bladed 99.5 5.8E-13 2E-17 115.7 17.6 154 45-241 54-225 (297)
49 2p4o_A Hypothetical protein; p 99.5 9.7E-13 3.3E-17 115.0 18.6 155 45-241 32-194 (306)
50 2qe8_A Uncharacterized protein 99.5 2.9E-12 1E-16 113.7 21.2 170 44-236 119-311 (343)
51 3sre_A PON1, serum paraoxonase 99.5 4.8E-13 1.6E-17 119.9 15.7 150 46-234 113-285 (355)
52 2qe8_A Uncharacterized protein 99.5 5.7E-12 1.9E-16 111.8 19.7 170 45-236 17-216 (343)
53 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 6.8E-12 2.3E-16 108.4 17.9 159 45-241 71-252 (314)
54 3dsm_A Uncharacterized protein 99.4 5.2E-12 1.8E-16 111.5 17.0 142 44-233 130-285 (328)
55 3g4e_A Regucalcin; six bladed 99.4 2.3E-11 7.9E-16 105.6 19.1 150 43-240 11-175 (297)
56 3dsm_A Uncharacterized protein 99.4 1.2E-10 4.1E-15 102.7 21.7 147 44-234 83-244 (328)
57 2g8s_A Glucose/sorbosone dehyd 99.4 1.6E-11 5.3E-16 110.0 16.1 179 26-235 2-217 (353)
58 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 4E-11 1.4E-15 103.5 17.6 158 43-242 16-204 (314)
59 3vgz_A Uncharacterized protein 99.3 1.4E-10 4.9E-15 101.2 20.8 160 45-242 41-212 (353)
60 1cru_A Protein (soluble quinop 99.3 4.1E-11 1.4E-15 110.9 17.9 179 27-235 12-247 (454)
61 2p9w_A MAL S 1 allergenic prot 99.3 4.7E-11 1.6E-15 105.4 17.2 179 43-242 11-212 (334)
62 3das_A Putative oxidoreductase 99.3 1.8E-10 6.3E-15 102.8 19.7 174 30-237 20-223 (347)
63 2dg1_A DRP35, lactonase; beta 99.3 1.2E-10 4.3E-15 101.6 18.2 159 45-242 87-260 (333)
64 2ism_A Putative oxidoreductase 99.3 3.8E-11 1.3E-15 107.4 14.6 175 44-236 74-287 (352)
65 2dg1_A DRP35, lactonase; beta 99.3 6.4E-10 2.2E-14 97.0 21.8 152 43-240 43-208 (333)
66 2p9w_A MAL S 1 allergenic prot 99.3 5.6E-11 1.9E-15 104.8 14.9 169 45-234 63-253 (334)
67 3no2_A Uncharacterized protein 99.3 2.2E-10 7.7E-15 98.9 18.4 155 47-238 79-235 (276)
68 3hfq_A Uncharacterized protein 99.3 1E-09 3.5E-14 96.3 21.7 174 43-239 84-265 (347)
69 3qqz_A Putative uncharacterize 99.2 1.9E-09 6.5E-14 92.2 21.3 173 44-240 69-248 (255)
70 2ghs_A AGR_C_1268P; regucalcin 99.2 1.1E-09 3.8E-14 96.4 19.5 153 45-241 90-256 (326)
71 3sre_A PON1, serum paraoxonase 99.2 8.8E-10 3E-14 98.7 17.8 161 44-242 49-249 (355)
72 3a9g_A Putative uncharacterize 99.2 7.2E-10 2.5E-14 99.3 16.9 164 44-234 134-330 (354)
73 3vgz_A Uncharacterized protein 99.1 1.7E-08 5.9E-13 87.9 23.7 148 45-237 185-336 (353)
74 3hfq_A Uncharacterized protein 99.1 2.9E-09 1E-13 93.3 18.2 163 45-239 141-311 (347)
75 2iwa_A Glutamine cyclotransfer 99.1 1.6E-08 5.4E-13 87.0 20.7 156 46-238 67-230 (266)
76 3scy_A Hypothetical bacterial 99.1 1.3E-08 4.5E-13 89.7 20.4 163 46-239 156-331 (361)
77 2g8s_A Glucose/sorbosone dehyd 99.1 1.6E-09 5.6E-14 96.8 14.1 177 44-240 129-349 (353)
78 3mbr_X Glutamine cyclotransfer 99.1 3.1E-08 1E-12 83.9 21.0 167 47-252 67-239 (243)
79 3nol_A Glutamine cyclotransfer 99.1 2E-08 7E-13 85.8 19.4 160 47-247 89-255 (262)
80 3no2_A Uncharacterized protein 99.1 1.9E-08 6.5E-13 86.7 19.6 144 45-234 37-183 (276)
81 2ghs_A AGR_C_1268P; regucalcin 99.1 7.4E-09 2.5E-13 91.0 17.3 144 45-237 134-294 (326)
82 3scy_A Hypothetical bacterial 99.0 4.7E-08 1.6E-12 86.2 20.0 170 44-235 99-279 (361)
83 3nok_A Glutaminyl cyclase; bet 99.0 2.7E-08 9.3E-13 85.1 17.6 155 47-242 98-259 (268)
84 3u4y_A Uncharacterized protein 98.9 1E-07 3.5E-12 82.5 20.0 159 44-235 127-293 (331)
85 2iwa_A Glutamine cyclotransfer 98.9 5.1E-08 1.8E-12 83.8 17.7 149 45-239 21-175 (266)
86 3u4y_A Uncharacterized protein 98.9 1.6E-07 5.4E-12 81.3 19.3 152 44-239 40-201 (331)
87 3das_A Putative oxidoreductase 98.9 5.9E-08 2E-12 86.5 15.8 163 45-234 140-326 (347)
88 1ri6_A Putative isomerase YBHE 98.9 2.1E-07 7E-12 80.4 18.9 158 44-239 37-203 (343)
89 1ri6_A Putative isomerase YBHE 98.9 3.1E-07 1E-11 79.3 19.7 166 44-239 128-302 (343)
90 1jof_A Carboxy-CIS,CIS-muconat 98.8 3.4E-07 1.1E-11 81.3 17.5 171 44-239 144-335 (365)
91 1l0q_A Surface layer protein; 98.8 2.8E-06 9.5E-11 75.1 23.2 140 46-233 75-218 (391)
92 4a9v_A PHOX; hydrolase, beta-p 98.7 1.1E-07 3.6E-12 89.3 13.7 123 42-178 381-550 (592)
93 1l0q_A Surface layer protein; 98.7 2.9E-06 9.9E-11 75.0 22.3 146 46-239 33-183 (391)
94 1jof_A Carboxy-CIS,CIS-muconat 98.7 3E-07 1E-11 81.6 14.9 157 44-238 39-217 (365)
95 3qqz_A Putative uncharacterize 98.7 2.2E-06 7.4E-11 73.1 19.2 181 30-240 11-198 (255)
96 1jmx_B Amine dehydrogenase; ox 98.6 1.3E-06 4.6E-11 75.5 16.6 152 47-235 2-167 (349)
97 1cru_A Protein (soluble quinop 98.6 3.1E-07 1.1E-11 84.8 12.9 115 102-234 25-162 (454)
98 1nir_A Nitrite reductase; hemo 98.6 5.6E-06 1.9E-10 77.9 21.1 154 46-233 180-342 (543)
99 3c75_H MADH, methylamine dehyd 98.6 1.7E-06 5.8E-11 79.2 16.6 112 55-195 83-214 (426)
100 3sjl_D Methylamine dehydrogena 98.6 2.8E-06 9.7E-11 76.7 17.1 147 53-238 41-212 (386)
101 3bws_A Protein LP49; two-domai 98.6 1.4E-05 4.7E-10 71.5 21.7 143 44-234 211-364 (433)
102 1pby_B Quinohemoprotein amine 98.6 2.6E-05 8.9E-10 66.8 22.5 119 46-194 35-167 (337)
103 2oiz_A Aromatic amine dehydrog 98.5 1.1E-05 3.8E-10 71.8 19.4 78 45-133 51-139 (361)
104 3nok_A Glutaminyl cyclase; bet 98.5 4.3E-06 1.5E-10 71.5 14.9 139 46-233 56-197 (268)
105 2ece_A 462AA long hypothetical 98.5 1.1E-05 3.8E-10 74.0 18.2 172 45-233 188-399 (462)
106 2mad_H Methylamine dehydrogena 98.4 5.6E-05 1.9E-09 67.7 21.2 80 45-135 67-157 (373)
107 3bws_A Protein LP49; two-domai 98.4 1.7E-05 5.8E-10 71.0 17.4 146 45-233 123-272 (433)
108 3mbr_X Glutamine cyclotransfer 98.4 2.6E-05 8.8E-10 65.9 17.3 142 44-233 20-166 (243)
109 4a9v_A PHOX; hydrolase, beta-p 98.4 4.7E-06 1.6E-10 78.3 13.6 119 101-233 381-549 (592)
110 1fwx_A Nitrous oxide reductase 98.3 5.2E-06 1.8E-10 78.5 13.1 169 44-234 133-349 (595)
111 1pby_B Quinohemoprotein amine 98.3 5E-05 1.7E-09 65.0 18.3 137 58-233 2-153 (337)
112 3nol_A Glutamine cyclotransfer 98.3 1.7E-05 5.8E-10 67.7 14.8 139 47-233 45-188 (262)
113 1mda_H Methylamine dehydrogena 98.3 2.7E-05 9.3E-10 69.8 16.7 77 45-132 66-156 (368)
114 1jmx_B Amine dehydrogenase; ox 98.3 0.00017 5.7E-09 62.0 20.8 118 46-193 44-178 (349)
115 2mad_H Methylamine dehydrogena 98.3 6.5E-05 2.2E-09 67.3 18.6 113 54-194 30-160 (373)
116 3amr_A 3-phytase; beta-propell 98.3 5.1E-05 1.7E-09 67.4 17.0 156 44-227 127-309 (355)
117 3q6k_A 43.2 kDa salivary prote 98.2 0.00017 5.8E-09 64.8 20.1 158 46-235 153-343 (381)
118 1qks_A Cytochrome CD1 nitrite 98.2 0.00021 7.2E-09 67.6 21.3 165 44-242 196-370 (567)
119 2oiz_A Aromatic amine dehydrog 98.2 3E-05 1E-09 68.9 14.7 112 56-195 15-145 (361)
120 3c75_H MADH, methylamine dehyd 98.2 7.3E-05 2.5E-09 68.3 17.2 80 45-135 119-210 (426)
121 1nir_A Nitrite reductase; hemo 98.2 8.9E-05 3E-09 69.7 17.6 106 52-193 145-260 (543)
122 2wg3_C Hedgehog-interacting pr 98.1 7.7E-05 2.6E-09 68.9 16.3 182 30-236 2-244 (463)
123 1mda_H Methylamine dehydrogena 98.1 4.2E-05 1.4E-09 68.6 14.2 107 56-190 31-158 (368)
124 3hxj_A Pyrrolo-quinoline quino 98.1 0.00016 5.5E-09 62.0 16.7 101 105-239 216-318 (330)
125 1qks_A Cytochrome CD1 nitrite 98.1 0.00025 8.6E-09 67.1 18.6 104 56-194 166-279 (567)
126 3sjl_D Methylamine dehydrogena 98.0 0.00027 9.2E-09 63.7 17.5 80 44-135 78-170 (386)
127 3q6k_A 43.2 kDa salivary prote 98.0 0.0011 3.8E-08 59.5 21.0 168 41-234 83-294 (381)
128 3amr_A 3-phytase; beta-propell 98.0 0.0008 2.8E-08 59.7 19.4 132 30-189 58-209 (355)
129 1fwx_A Nitrous oxide reductase 97.9 2.7E-05 9.2E-10 73.7 9.0 158 45-229 277-457 (595)
130 3hxj_A Pyrrolo-quinoline quino 97.8 0.00062 2.1E-08 58.3 15.6 141 49-242 141-281 (330)
131 3zwu_A Alkaline phosphatase PH 97.8 0.0003 1E-08 66.7 14.1 122 42-177 381-549 (592)
132 1tl2_A L10, protein (tachylect 97.8 0.00054 1.9E-08 56.9 13.8 151 44-241 40-206 (236)
133 3ow8_A WD repeat-containing pr 97.7 0.013 4.3E-07 50.6 22.1 144 46-238 124-272 (321)
134 2ece_A 462AA long hypothetical 97.7 0.0014 4.9E-08 60.0 15.7 129 45-177 251-399 (462)
135 3s25_A Hypothetical 7-bladed b 97.7 0.00048 1.6E-08 60.0 12.0 108 51-197 110-223 (302)
136 2ymu_A WD-40 repeat protein; u 97.6 0.0069 2.4E-07 55.9 20.6 141 47-238 429-573 (577)
137 1gxr_A ESG1, transducin-like e 97.6 0.013 4.3E-07 49.6 20.4 143 46-238 185-330 (337)
138 3v9f_A Two-component system se 97.6 0.0035 1.2E-07 61.1 18.3 150 47-236 452-603 (781)
139 3s25_A Hypothetical 7-bladed b 97.6 0.0016 5.4E-08 56.6 14.3 107 47-196 57-182 (302)
140 3ow8_A WD repeat-containing pr 97.6 0.018 6.3E-07 49.5 21.0 145 46-238 166-314 (321)
141 2ymu_A WD-40 repeat protein; u 97.6 0.014 4.8E-07 53.8 21.2 115 46-196 387-504 (577)
142 1got_B GT-beta; complex (GTP-b 97.5 0.023 7.7E-07 49.1 20.5 147 46-238 186-336 (340)
143 2wg3_C Hedgehog-interacting pr 97.4 0.00075 2.6E-08 62.3 10.9 118 102-235 12-158 (463)
144 3zwu_A Alkaline phosphatase PH 97.4 0.0019 6.4E-08 61.3 13.6 118 101-232 381-548 (592)
145 3v9f_A Two-component system se 97.4 0.01 3.5E-07 57.7 19.2 150 46-236 496-648 (781)
146 3iz6_a 40S ribosomal protein R 97.3 0.071 2.4E-06 46.8 22.4 157 47-238 208-368 (380)
147 1tl2_A L10, protein (tachylect 97.3 0.00092 3.1E-08 55.5 8.5 107 103-238 40-156 (236)
148 1gxr_A ESG1, transducin-like e 97.3 0.027 9.2E-07 47.5 18.2 144 47-239 144-290 (337)
149 4gqb_B Methylosome protein 50; 97.3 0.029 1E-06 49.0 18.6 149 47-240 172-326 (344)
150 3ei3_B DNA damage-binding prot 97.3 0.029 1E-06 48.8 18.6 114 47-190 121-236 (383)
151 2hqs_A Protein TOLB; TOLB, PAL 97.2 0.019 6.4E-07 51.5 17.4 74 106-195 269-349 (415)
152 2pbi_B Guanine nucleotide-bind 97.2 0.09 3.1E-06 45.7 20.6 147 48-238 200-350 (354)
153 4e54_B DNA damage-binding prot 97.1 0.0075 2.6E-07 54.2 13.4 114 47-190 167-282 (435)
154 4a2l_A BT_4663, two-component 97.1 0.029 1E-06 54.6 18.2 153 46-236 453-606 (795)
155 4ery_A WD repeat-containing pr 97.1 0.066 2.2E-06 45.2 18.5 114 46-193 25-141 (312)
156 2xyi_A Probable histone-bindin 97.1 0.037 1.3E-06 49.5 17.5 162 46-238 233-403 (430)
157 4a2l_A BT_4663, two-component 97.0 0.035 1.2E-06 54.0 18.5 149 47-236 500-651 (795)
158 1sq9_A Antiviral protein SKI8; 97.0 0.066 2.2E-06 46.5 18.5 133 46-195 188-327 (397)
159 1k8k_C P40, ARP2/3 complex 41 97.0 0.036 1.2E-06 47.6 16.3 104 105-239 144-268 (372)
160 2hqs_A Protein TOLB; TOLB, PAL 97.0 0.099 3.4E-06 46.7 19.7 116 46-194 180-304 (415)
161 4gqb_B Methylosome protein 50; 97.0 0.028 9.5E-07 49.1 15.6 114 48-192 131-248 (344)
162 2xyi_A Probable histone-bindin 97.0 0.058 2E-06 48.2 18.0 123 45-191 129-264 (430)
163 3zwl_B Eukaryotic translation 96.9 0.15 5.3E-06 43.2 20.0 147 46-240 177-341 (369)
164 2ojh_A Uncharacterized protein 96.9 0.12 4E-06 42.3 17.8 115 46-194 43-166 (297)
165 1erj_A Transcriptional repress 96.9 0.098 3.4E-06 46.1 18.4 152 48-239 127-281 (393)
166 4g56_B MGC81050 protein; prote 96.8 0.047 1.6E-06 47.7 15.9 104 105-239 228-337 (357)
167 3ei3_B DNA damage-binding prot 96.8 0.12 4E-06 44.9 17.9 124 45-196 74-200 (383)
168 1k8k_C P40, ARP2/3 complex 41 96.8 0.071 2.4E-06 45.7 16.3 113 46-191 10-128 (372)
169 2aq5_A Coronin-1A; WD40 repeat 96.8 0.14 4.8E-06 44.9 18.6 116 46-191 133-255 (402)
170 4e54_B DNA damage-binding prot 96.8 0.054 1.8E-06 48.5 16.0 118 47-192 122-242 (435)
171 3zwl_B Eukaryotic translation 96.8 0.15 5.3E-06 43.2 18.3 123 46-190 76-206 (369)
172 3k26_A Polycomb protein EED; W 96.7 0.12 4.1E-06 44.0 17.4 157 46-240 20-187 (366)
173 1r5m_A SIR4-interacting protei 96.7 0.041 1.4E-06 47.9 14.6 110 47-192 250-363 (425)
174 3frx_A Guanine nucleotide-bind 96.7 0.2 6.8E-06 42.7 18.7 114 47-194 68-189 (319)
175 4ery_A WD repeat-containing pr 96.7 0.22 7.6E-06 41.8 20.5 113 46-193 67-183 (312)
176 2z3z_A Dipeptidyl aminopeptida 96.7 0.15 5.1E-06 48.4 19.2 121 46-194 259-395 (706)
177 2ynn_A Coatomer subunit beta'; 96.6 0.17 5.9E-06 42.7 17.6 111 46-191 15-129 (304)
178 2aq5_A Coronin-1A; WD40 repeat 96.6 0.098 3.4E-06 45.9 16.5 120 47-195 84-212 (402)
179 3dm0_A Maltose-binding peripla 96.6 0.14 4.7E-06 48.8 18.5 148 47-238 433-585 (694)
180 1vyh_C Platelet-activating fac 96.6 0.069 2.3E-06 47.5 15.1 112 47-193 111-226 (410)
181 2ojh_A Uncharacterized protein 96.5 0.25 8.5E-06 40.3 17.6 74 106-195 131-211 (297)
182 1vyh_C Platelet-activating fac 96.5 0.29 1E-05 43.3 19.0 114 47-194 195-331 (410)
183 3odt_A Protein DOA1; ubiquitin 96.5 0.18 6E-06 41.9 16.6 105 105-242 186-293 (313)
184 2pm9_A Protein WEB1, protein t 96.4 0.078 2.7E-06 46.3 14.5 122 46-193 167-297 (416)
185 4g56_B MGC81050 protein; prote 96.4 0.053 1.8E-06 47.3 13.2 115 47-191 142-259 (357)
186 2xzm_R RACK1; ribosome, transl 96.3 0.44 1.5E-05 40.8 19.0 115 47-191 79-204 (343)
187 3iz6_a 40S ribosomal protein R 96.3 0.35 1.2E-05 42.2 18.0 156 48-238 161-322 (380)
188 1got_B GT-beta; complex (GTP-b 96.3 0.27 9.2E-06 42.2 17.0 73 105-194 186-261 (340)
189 3mmy_A MRNA export factor; mRN 96.2 0.32 1.1E-05 41.2 16.9 113 46-191 41-161 (368)
190 2pm9_A Protein WEB1, protein t 96.2 0.035 1.2E-06 48.5 10.9 115 46-191 216-338 (416)
191 1r5m_A SIR4-interacting protei 96.2 0.18 6.3E-06 43.7 15.4 145 47-242 209-358 (425)
192 3jrp_A Fusion protein of prote 96.2 0.51 1.7E-05 40.1 18.2 120 46-191 103-241 (379)
193 3mkq_A Coatomer beta'-subunit; 96.2 0.21 7E-06 48.0 16.9 111 46-191 15-129 (814)
194 4h5i_A Guanine nucleotide-exch 96.1 0.58 2E-05 40.7 18.4 60 160-233 271-330 (365)
195 3vl1_A 26S proteasome regulato 96.1 0.62 2.1E-05 40.6 19.3 131 46-194 141-282 (420)
196 2ynn_A Coatomer subunit beta'; 96.1 0.52 1.8E-05 39.6 17.8 117 47-195 143-264 (304)
197 1nr0_A Actin interacting prote 96.1 0.51 1.7E-05 44.2 19.0 122 47-193 150-273 (611)
198 1nr0_A Actin interacting prote 96.1 0.17 5.9E-06 47.4 15.7 109 105-238 493-604 (611)
199 2z3z_A Dipeptidyl aminopeptida 96.1 0.41 1.4E-05 45.3 18.5 108 45-177 82-199 (706)
200 3o4h_A Acylamino-acid-releasin 96.1 0.062 2.1E-06 49.9 12.4 104 107-233 153-263 (582)
201 3mkq_A Coatomer beta'-subunit; 96.1 0.42 1.4E-05 45.8 18.6 115 47-193 143-262 (814)
202 2ecf_A Dipeptidyl peptidase IV 96.1 0.57 1.9E-05 44.6 19.4 167 44-233 36-227 (741)
203 4aez_A CDC20, WD repeat-contai 96.1 0.67 2.3E-05 40.6 20.4 74 105-194 219-297 (401)
204 3dm0_A Maltose-binding peripla 96.1 0.44 1.5E-05 45.2 18.6 121 45-196 383-509 (694)
205 2vdu_B TRNA (guanine-N(7)-)-me 96.1 0.28 9.5E-06 43.9 16.3 116 46-192 104-231 (450)
206 3fm0_A Protein CIAO1; WDR39,SG 96.0 0.24 8.1E-06 42.7 15.3 144 47-232 64-211 (345)
207 1pgu_A Actin interacting prote 96.0 0.43 1.5E-05 43.8 17.6 150 45-238 447-607 (615)
208 3sfz_A APAF-1, apoptotic pepti 96.0 0.36 1.2E-05 48.9 18.2 145 46-238 617-767 (1249)
209 1erj_A Transcriptional repress 95.8 0.9 3.1E-05 39.7 18.4 127 46-194 66-200 (393)
210 4h5i_A Guanine nucleotide-exch 95.7 0.93 3.2E-05 39.4 19.3 113 47-191 136-255 (365)
211 3fm0_A Protein CIAO1; WDR39,SG 95.7 0.47 1.6E-05 40.7 15.8 112 47-191 19-137 (345)
212 3i2n_A WD repeat-containing pr 95.7 0.26 8.8E-06 41.7 13.9 107 56-190 179-291 (357)
213 2pbi_B Guanine nucleotide-bind 95.7 0.91 3.1E-05 39.2 19.1 111 48-193 158-274 (354)
214 3ott_A Two-component system se 95.7 0.5 1.7E-05 45.6 17.2 143 47-236 474-618 (758)
215 1pgu_A Actin interacting prote 95.6 0.46 1.6E-05 43.5 16.3 109 44-187 18-148 (615)
216 4aez_A CDC20, WD repeat-contai 95.6 0.82 2.8E-05 39.9 17.2 114 46-193 261-383 (401)
217 3ott_A Two-component system se 95.6 0.96 3.3E-05 43.5 18.8 158 47-236 375-537 (758)
218 3odt_A Protein DOA1; ubiquitin 95.6 0.69 2.4E-05 38.1 15.8 104 105-239 144-249 (313)
219 4aow_A Guanine nucleotide-bind 95.5 0.89 3.1E-05 38.0 18.0 111 105-239 217-331 (340)
220 4a11_B DNA excision repair pro 95.4 0.64 2.2E-05 40.0 15.6 87 47-134 189-276 (408)
221 4a11_B DNA excision repair pro 95.4 1.2 4E-05 38.2 17.6 113 46-191 101-219 (408)
222 3frx_A Guanine nucleotide-bind 95.3 1.2 4.1E-05 37.7 19.7 119 46-195 19-143 (319)
223 3mmy_A MRNA export factor; mRN 95.2 1.2 4E-05 37.6 16.8 59 160-233 275-333 (368)
224 3lrv_A PRE-mRNA-splicing facto 95.2 0.69 2.4E-05 39.5 15.1 145 47-232 128-277 (343)
225 3sfz_A APAF-1, apoptotic pepti 95.2 1.2 4.2E-05 45.0 19.1 159 46-239 745-907 (1249)
226 1yfq_A Cell cycle arrest prote 95.2 0.17 5.9E-06 42.7 11.0 110 46-189 13-130 (342)
227 3dwl_C Actin-related protein 2 95.2 0.058 2E-06 46.7 8.1 86 105-191 148-237 (377)
228 3azo_A Aminopeptidase; POP fam 95.2 0.17 6E-06 47.5 11.9 111 54-190 88-226 (662)
229 2vdu_B TRNA (guanine-N(7)-)-me 95.1 1.7 5.7E-05 38.7 19.4 126 46-188 197-337 (450)
230 3azo_A Aminopeptidase; POP fam 95.1 1.8 6.1E-05 40.5 18.6 125 47-195 190-330 (662)
231 3dwl_C Actin-related protein 2 95.1 0.18 6.2E-06 43.4 10.8 109 47-189 58-176 (377)
232 1sq9_A Antiviral protein SKI8; 94.9 1 3.5E-05 38.7 15.5 140 46-190 235-395 (397)
233 3dw8_B Serine/threonine-protei 94.8 1.9 6.6E-05 37.6 17.1 141 47-195 229-378 (447)
234 2ecf_A Dipeptidyl peptidase IV 94.7 1.5 5.2E-05 41.5 17.3 116 47-191 289-416 (741)
235 3q7m_A Lipoprotein YFGL, BAMB; 94.7 1.7 5.7E-05 37.6 16.1 132 56-239 239-372 (376)
236 3k26_A Polycomb protein EED; W 94.4 1.7 5.9E-05 36.5 15.3 116 46-191 71-193 (366)
237 3vl1_A 26S proteasome regulato 94.3 2.4 8.2E-05 36.7 19.5 107 56-195 108-217 (420)
238 2xzm_R RACK1; ribosome, transl 94.2 2.3 8E-05 36.1 19.2 111 47-189 121-243 (343)
239 3pe7_A Oligogalacturonate lyas 94.0 0.42 1.4E-05 41.2 10.8 79 108-196 242-335 (388)
240 3jrp_A Fusion protein of prote 94.0 1.3 4.5E-05 37.4 13.8 117 46-191 13-135 (379)
241 3i2n_A WD repeat-containing pr 93.9 1.5 5.1E-05 36.8 13.8 119 47-194 68-203 (357)
242 1k32_A Tricorn protease; prote 93.9 1.7 5.8E-05 43.5 16.1 100 105-234 380-491 (1045)
243 3jro_A Fusion protein of prote 93.8 0.99 3.4E-05 43.5 13.8 66 114-191 169-239 (753)
244 1yfq_A Cell cycle arrest prote 93.7 2.6 9E-05 35.1 16.4 126 46-195 152-287 (342)
245 3dw8_B Serine/threonine-protei 93.6 3.4 0.00012 36.0 17.0 138 46-189 30-206 (447)
246 3f3f_A Nucleoporin SEH1; struc 93.3 2.9 0.0001 34.4 14.7 128 46-190 112-249 (351)
247 3gre_A Serine/threonine-protei 93.1 4.2 0.00014 35.5 15.9 143 29-193 50-204 (437)
248 2oit_A Nucleoporin 214KDA; NH2 93.0 1.3 4.5E-05 39.7 12.5 123 46-194 94-227 (434)
249 3v7d_B Cell division control p 92.6 3.7 0.00013 36.2 15.0 103 57-194 280-385 (464)
250 4aow_A Guanine nucleotide-bind 92.6 3.8 0.00013 34.0 17.2 77 45-135 39-118 (340)
251 2oaj_A Protein SNI1; WD40 repe 92.6 7 0.00024 38.6 18.1 125 47-195 61-187 (902)
252 3jro_A Fusion protein of prote 92.1 5 0.00017 38.5 16.0 115 47-191 56-190 (753)
253 3f3f_A Nucleoporin SEH1; struc 92.0 4.4 0.00015 33.3 15.0 73 46-132 59-141 (351)
254 3o4h_A Acylamino-acid-releasin 91.9 1.6 5.3E-05 40.3 11.9 70 108-195 69-146 (582)
255 1xfd_A DIP, dipeptidyl aminope 91.7 7.1 0.00024 36.6 16.4 116 46-177 62-191 (723)
256 3vu4_A KMHSV2; beta-propeller 91.1 5.1 0.00017 34.3 13.7 71 105-191 197-272 (355)
257 3gre_A Serine/threonine-protei 90.9 6.3 0.00021 34.3 14.3 108 56-193 181-295 (437)
258 2hes_X YDR267CP; beta-propelle 90.9 6.6 0.00022 33.1 17.2 114 47-191 61-185 (330)
259 4gga_A P55CDC, cell division c 90.6 5.6 0.00019 34.8 13.8 109 48-190 280-395 (420)
260 2oaj_A Protein SNI1; WD40 repe 90.4 11 0.00038 37.1 17.0 113 45-194 18-133 (902)
261 2j04_B YDR362CP, TAU91; beta p 90.3 4.8 0.00016 37.1 13.4 111 48-191 270-387 (524)
262 3pe7_A Oligogalacturonate lyas 90.1 1.7 5.9E-05 37.2 9.7 79 106-189 292-383 (388)
263 1k32_A Tricorn protease; prote 90.0 3.7 0.00013 41.0 13.2 113 46-196 297-415 (1045)
264 1xfd_A DIP, dipeptidyl aminope 89.9 1.9 6.6E-05 40.6 10.6 118 46-193 18-146 (723)
265 2j04_A TAU60, YPL007P, hypothe 89.7 14 0.00046 34.8 17.0 131 45-191 16-161 (588)
266 2pm7_B Protein transport prote 89.6 7.9 0.00027 32.0 16.4 31 160-190 206-238 (297)
267 3lrv_A PRE-mRNA-splicing facto 89.5 8.8 0.0003 32.4 17.9 72 106-192 128-203 (343)
268 2gop_A Trilobed protease; beta 88.7 9.6 0.00033 31.8 13.6 56 105-177 60-122 (347)
269 2oit_A Nucleoporin 214KDA; NH2 88.4 5.4 0.00018 35.6 12.0 73 46-135 151-224 (434)
270 3c5m_A Oligogalacturonate lyas 88.2 11 0.00038 31.9 14.6 82 109-195 287-389 (396)
271 3v7d_B Cell division control p 88.1 13 0.00044 32.6 19.2 68 110-194 275-345 (464)
272 2j04_A TAU60, YPL007P, hypothe 87.9 18 0.00061 34.0 15.6 114 47-195 132-259 (588)
273 1kv9_A Type II quinohemoprotei 87.9 15 0.0005 34.9 15.3 34 50-86 235-286 (668)
274 2hes_X YDR267CP; beta-propelle 87.3 12 0.00042 31.4 20.6 111 47-189 17-137 (330)
275 3c5m_A Oligogalacturonate lyas 86.0 5.7 0.00019 33.8 10.3 75 106-194 190-277 (396)
276 2pm7_B Protein transport prote 84.3 16 0.00055 30.0 17.1 113 47-191 12-133 (297)
277 1kb0_A Quinohemoprotein alcoho 84.2 29 0.00099 32.9 16.8 74 48-135 122-201 (677)
278 1z68_A Fibroblast activation p 84.0 12 0.00042 35.1 12.5 118 47-195 18-144 (719)
279 3sbq_A Nitrous-oxide reductase 83.1 4.4 0.00015 38.1 8.4 83 104-190 323-408 (638)
280 3vu4_A KMHSV2; beta-propeller 83.0 21 0.00071 30.3 18.2 61 160-233 197-258 (355)
281 3bg1_A Protein SEC13 homolog; 82.9 13 0.00043 31.1 11.0 110 47-190 16-136 (316)
282 2j04_B YDR362CP, TAU91; beta p 82.2 5.4 0.00019 36.8 8.9 67 107-190 359-428 (524)
283 4gq1_A NUP37; propeller, trans 82.1 24 0.00082 30.4 17.4 171 46-233 188-377 (393)
284 1yiq_A Quinohemoprotein alcoho 80.8 39 0.0013 32.1 16.4 35 49-86 239-291 (689)
285 3q7m_A Lipoprotein YFGL, BAMB; 80.2 26 0.0009 29.7 17.2 61 113-193 238-299 (376)
286 4a5s_A Dipeptidyl peptidase 4 79.7 42 0.0014 31.8 16.0 115 47-194 19-145 (740)
287 2ovr_B FBW7, F-BOX/WD repeat p 79.3 31 0.0011 30.0 16.3 64 114-193 328-394 (445)
288 3sbq_A Nitrous-oxide reductase 78.8 8.5 0.00029 36.2 8.8 73 45-131 323-405 (638)
289 4gq1_A NUP37; propeller, trans 76.0 18 0.0006 31.3 10.0 72 105-192 138-220 (393)
290 2ad6_A Methanol dehydrogenase 75.8 50 0.0017 30.5 18.0 35 49-86 239-288 (571)
291 1w6s_A Methanol dehydrogenase 74.2 58 0.002 30.5 16.3 35 49-86 245-294 (599)
292 2gop_A Trilobed protease; beta 73.6 37 0.0013 28.0 15.3 32 106-139 173-214 (347)
293 3bg1_A Protein SEC13 homolog; 72.8 39 0.0013 27.9 13.5 70 47-133 60-135 (316)
294 4gga_A P55CDC, cell division c 72.3 47 0.0016 28.6 15.4 66 48-133 151-217 (420)
295 1w6s_A Methanol dehydrogenase 71.5 67 0.0023 30.0 18.4 75 48-135 109-193 (599)
296 4a5s_A Dipeptidyl peptidase 4 69.5 33 0.0011 32.6 10.9 107 107-234 20-139 (740)
297 2xdw_A Prolyl endopeptidase; a 68.9 77 0.0026 29.7 17.6 114 48-190 128-268 (710)
298 1z68_A Fibroblast activation p 62.6 17 0.00058 34.1 7.3 74 107-193 19-102 (719)
299 2bkl_A Prolyl endopeptidase; m 60.0 1.1E+02 0.0038 28.5 15.9 114 48-191 171-305 (695)
300 3iuj_A Prolyl endopeptidase; h 60.0 1.1E+02 0.0039 28.6 15.7 114 49-196 238-365 (693)
301 4ggc_A P55CDC, cell division c 58.2 70 0.0024 25.6 18.7 102 107-238 200-308 (318)
302 4ggc_A P55CDC, cell division c 57.5 72 0.0025 25.5 15.9 106 47-189 70-180 (318)
303 1xip_A Nucleoporin NUP159; bet 56.9 80 0.0027 27.8 10.2 79 43-133 36-114 (388)
304 2xdw_A Prolyl endopeptidase; a 56.5 1.3E+02 0.0044 28.1 19.9 68 107-191 236-321 (710)
305 2xbg_A YCF48-like protein; pho 54.1 96 0.0033 25.9 19.7 65 107-189 166-233 (327)
306 2w18_A PALB2, fancn, partner a 53.6 1.1E+02 0.0039 26.6 15.1 58 114-188 294-355 (356)
307 3s9j_A Member of DUF4221 famil 52.8 68 0.0023 28.1 8.9 69 57-135 40-111 (369)
308 2ad6_A Methanol dehydrogenase 50.9 1.5E+02 0.0051 27.2 18.4 72 49-135 110-187 (571)
309 1kb0_A Quinohemoprotein alcoho 49.6 1.7E+02 0.0058 27.5 19.0 35 49-86 247-299 (677)
310 2xbg_A YCF48-like protein; pho 49.3 1.2E+02 0.0039 25.4 16.1 102 106-239 124-228 (327)
311 2bkl_A Prolyl endopeptidase; m 47.6 1.8E+02 0.0061 27.1 14.4 72 107-192 124-213 (695)
312 1yiq_A Quinohemoprotein alcoho 45.9 2E+02 0.0067 27.1 14.0 27 108-135 480-507 (689)
313 1xip_A Nucleoporin NUP159; bet 43.8 1.7E+02 0.0057 25.7 14.0 105 47-193 90-194 (388)
314 3iuj_A Prolyl endopeptidase; h 39.1 2.4E+02 0.0083 26.2 11.7 26 110-135 332-360 (693)
315 2w18_A PALB2, fancn, partner a 38.5 2E+02 0.0068 25.0 20.0 72 108-193 183-272 (356)
316 1yr2_A Prolyl oligopeptidase; 37.1 2.7E+02 0.0091 26.1 16.9 115 48-195 271-400 (741)
317 1flg_A Protein (quinoprotein e 35.1 2.7E+02 0.0092 25.6 13.4 111 49-190 416-581 (582)
318 2ovr_B FBW7, F-BOX/WD repeat p 32.7 2.3E+02 0.008 24.1 18.5 67 107-194 243-312 (445)
319 1kv9_A Type II quinohemoprotei 30.4 3.4E+02 0.012 25.3 17.8 28 56-86 162-194 (668)
320 3b7f_A Glycosyl hydrolase, BNR 30.3 2.5E+02 0.0086 23.8 14.8 138 46-191 56-209 (394)
321 1tk7_A CG4244-PB; WW domain, n 29.6 1.3E+02 0.0044 20.2 6.2 62 108-182 18-80 (88)
322 1k3i_A Galactose oxidase precu 25.6 4E+02 0.014 24.6 10.9 77 105-194 187-278 (656)
323 2hz6_A Endoplasmic reticulum t 25.1 1.2E+02 0.0043 25.7 6.0 30 50-85 5-34 (369)
324 4ftd_A Uncharacterized protein 20.3 4.7E+02 0.016 23.5 8.8 83 106-193 191-281 (453)
No 1
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=3.3e-23 Score=193.03 Aligned_cols=150 Identities=21% Similarity=0.291 Sum_probs=124.1
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccE---EEEEcC-CcccCCCCCcccccCCCCc-eEEEc-------
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV---KRLAGD-GVQGYSDGEPGSARFDKPK-SFAVD------- 112 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~---~~~~g~-g~~g~~dg~~~~~~~~~P~-giavd------- 112 (269)
..|.+|++++.++.|||+|+.+|+|++++++ ...+.+ .+++|. |..|+.||....++|+.|. +++++
T Consensus 310 ~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d-g~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~ 388 (496)
T 3kya_A 310 SWEFQIFIHPTGKYAYFGVINNHYFMRSDYD-EIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGE 388 (496)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEE-TTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSS
T ss_pred CCceEEEEcCCCCEEEEEeCCCCEEEEEecC-CCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcccccccc
Confidence 4699999986545599999999999998753 123343 678886 7788888877789999999 88998
Q ss_pred CCCCEEEEeCCCCEEEEEeCCcc-eEEecCCCC-------CCCCCCC-ccccccccCceEEEEeCCCCEEEEEECCCCeE
Q 024317 113 MKGNIYVADKSNHVIRKITNLGV-TTIAGGGSK-------KEGRADG-PAQNASFSNDFELTFVPHICALLISDHGNQLI 183 (269)
Q Consensus 113 ~~G~lyVaD~~n~~I~~~~~~g~-~~~~g~~~~-------~~~~~~~-~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I 183 (269)
++|+|||||+.||||++++++|. .+++|.+.. .++..+| .+..++|+.|+||++++++++|||+|+.|+||
T Consensus 389 ~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rI 468 (496)
T 3kya_A 389 EEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTI 468 (496)
T ss_dssp CCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEE
Confidence 78999999999999999999999 999998653 1355566 78889999999999998669999999999999
Q ss_pred EEEECCCCeEEE
Q 024317 184 RQINLKPEDCSK 195 (269)
Q Consensus 184 ~~~~~~~~~~~~ 195 (269)
|+|++++.....
T Consensus 469 rki~~~~~~~~~ 480 (496)
T 3kya_A 469 RTISMEQEENVA 480 (496)
T ss_dssp EEEEECCCC---
T ss_pred EEEECCCCcccc
Confidence 999998876654
No 2
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=3.8e-22 Score=185.85 Aligned_cols=185 Identities=15% Similarity=0.105 Sum_probs=133.8
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCC----CCCccE------------EEEEcCCcccCCCCCcccccCCCCc
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPL----SEESVV------------KRLAGDGVQGYSDGEPGSARFDKPK 107 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~----~~~g~~------------~~~~g~g~~g~~dg~~~~~~~~~P~ 107 (269)
+.+|.++++++.+++|||+|..+++|+++|+.. ..++.+ ..+... ..-..|.
T Consensus 246 ~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~------------~~~~~p~ 313 (496)
T 3kya_A 246 YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI------------ADPSWEF 313 (496)
T ss_dssp ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC------------SSSSCCE
T ss_pred CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec------------CCCCCce
Confidence 468999999877899999999999999998630 002322 111111 0124789
Q ss_pred eEEEcCCCC-EEEEeCCCCEEEEEeCCcc-------eEEecC-CCCCCCCCCCccccccccCce-EEEEeC------CCC
Q 024317 108 SFAVDMKGN-IYVADKSNHVIRKITNLGV-------TTIAGG-GSKKEGRADGPAQNASFSNDF-ELTFVP------HIC 171 (269)
Q Consensus 108 giavd~~G~-lyVaD~~n~~I~~~~~~g~-------~~~~g~-~~~~~~~~~~~~~~~~l~~P~-gia~~~------~~g 171 (269)
+|+++++|+ |||+|+.+|+|++++.++. .+++|. +. .++.+|.+..++|+.|. +++++. .++
T Consensus 314 ~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~--~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g 391 (496)
T 3kya_A 314 QIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ--SGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEY 391 (496)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTB--CCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCE
T ss_pred EEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCC--CcccCCcccccccCCCeEEEEEccccccccCCC
Confidence 999999999 8999999999999887663 356775 33 23456888899999999 788762 348
Q ss_pred EEEEEECCCCeEEEEECCCCeEEEecccCc-------cCCC-cccceeeeeccceeeEEEecC-CcEEEEcCCCCccccc
Q 024317 172 ALLISDHGNQLIRQINLKPEDCSKSSQSGS-------ALGA-VSVWVLVSVLSCLVSLVIGFV-ARPYIIRHTGRLDPPL 242 (269)
Q Consensus 172 ~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~-------~~g~-~~~~~~~~~l~~p~gia~d~~-g~lyVad~~g~~~~~~ 242 (269)
+|||+|+.|+||++|+++|...+..+.... ..|. .........|..|.|||+|++ |+|||+|..+...+.+
T Consensus 392 ~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki 471 (496)
T 3kya_A 392 DFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTI 471 (496)
T ss_dssp EEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence 999999999999999998876666654211 0011 110123347899999999997 9999999655555444
No 3
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.87 E-value=2.9e-21 Score=178.29 Aligned_cols=178 Identities=10% Similarity=0.063 Sum_probs=131.6
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccE-EEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~-~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVa 120 (269)
.+..|.++++++.+++|||+|..+++|++++. .+|.+ ..+...+. ...|.+|+++++|+ |||+
T Consensus 226 ~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~---~~g~~~~~~~~~~~------------~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 226 NARGAKTCAVHPQNGKIYYTRYHHAMISSYDP---ATGTLTEEEVMMDT------------KGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp ECSSBCCCEECTTTCCEEECBTTCSEEEEECT---TTCCEEEEEEECSC------------CSSCEEEEECTTSSEEEEE
T ss_pred ccCCCCEEEEeCCCCeEEEEECCCCEEEEEEC---CCCeEEEEEeccCC------------CCCcccEEEeCCCCEEEEE
Confidence 46789999997668999999999999999963 24776 44432211 12456899999998 9999
Q ss_pred eCCCCEEEEEeCCcc-------eEEecC-CCCCCCCCCCccccccccCceEEEE---------eCCCCEEEEEECCCCeE
Q 024317 121 DKSNHVIRKITNLGV-------TTIAGG-GSKKEGRADGPAQNASFSNDFELTF---------VPHICALLISDHGNQLI 183 (269)
Q Consensus 121 D~~n~~I~~~~~~g~-------~~~~g~-~~~~~~~~~~~~~~~~l~~P~gia~---------~~~~g~LyVaD~~n~~I 183 (269)
|..+++|++++.++. .+++|. +. .++.++.+..++|+.|.+|++ +++ ++|||+|..|++|
T Consensus 291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~--~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~-g~lyvaD~~n~~I 367 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSS--PGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDE-YDFYFCDRDSHTV 367 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBCCCEEEEECTTC--CCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCC-EEEEEEETTTTEE
T ss_pred eCCCCEEEEEeCCCCCcccCcEEEEEecCCC--CccCCCcccceEEcCCccEEEEccccccccCCC-CcEEEEECCCCEE
Confidence 999999999986532 466665 22 234567777889999999999 654 9999999999999
Q ss_pred EEEECCCCeEEEecccC---ccCCCcccceeeeeccceeeEEEe-cCCcEEEEcC-CCCcc
Q 024317 184 RQINLKPEDCSKSSQSG---SALGAVSVWVLVSVLSCLVSLVIG-FVARPYIIRH-TGRLD 239 (269)
Q Consensus 184 ~~~~~~~~~~~~~~~~g---~~~g~~~~~~~~~~l~~p~gia~d-~~g~lyVad~-~g~~~ 239 (269)
++|+++|...+..+... .+...+ .......|..|.|||+| ++|+|||+|. ++|++
T Consensus 368 ~~~~~~G~v~t~~G~g~~~~~G~~dG-~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr 427 (433)
T 4hw6_A 368 RVLTPEGRVTTYAGRGNSREWGYVDG-ELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVR 427 (433)
T ss_dssp EEECTTSEEEEEECCCTTCSSCCBCE-ETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred EEECCCCCEEEEEeCCCCCccccCCC-ccccccEeCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 99999886666655431 011111 01222357899999999 8999999995 44444
No 4
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.86 E-value=8.7e-20 Score=161.45 Aligned_cols=195 Identities=21% Similarity=0.208 Sum_probs=134.3
Q ss_pred CcEEEEEecCccCCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc---EEEEEcCCcccCCCCCcccccCCCCc
Q 024317 31 GYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV---VKRLAGDGVQGYSDGEPGSARFDKPK 107 (269)
Q Consensus 31 g~~~~~~~~g~~~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~---~~~~~g~g~~g~~dg~~~~~~~~~P~ 107 (269)
|..+..+ +...+..|.+|+++ .+|++||+|..+++|++++ .+|. +..+...+..+. ....+..|.
T Consensus 79 g~~~~~~--~~~~~~~p~gia~d-~~g~l~v~d~~~~~v~~~~----~~g~~~~~~~~~~~~~~g~-----~~~~~~~P~ 146 (329)
T 3fvz_A 79 AEILQSS--GKNLFYLPHGLSID-TDGNYWVTDVALHQVFKLD----PHSKEGPLLILGRSMQPGS-----DQNHFCQPT 146 (329)
T ss_dssp CCEEEEE--CTTTCSSEEEEEEC-TTSCEEEEETTTTEEEEEC----TTCSSCCSEEESBTTBCCC-----STTCCSSEE
T ss_pred CeEEecc--CCCccCCceEEEEC-CCCCEEEEECCCCEEEEEe----CCCCeEEEEEecccCCCCC-----CccccCCCc
Confidence 4444443 33567899999996 5888999999999999995 4554 333332222222 234688999
Q ss_pred eEEEcC-CCCEEEEeC-CCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEE
Q 024317 108 SFAVDM-KGNIYVADK-SNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIR 184 (269)
Q Consensus 108 giavd~-~G~lyVaD~-~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~ 184 (269)
+|++++ +|+|||+|. .+++|++++++|. ....+..... ..+..+.|..|++|++++++++|||+|..+++|+
T Consensus 147 ~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~-----~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSG-----SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQ 221 (329)
T ss_dssp EEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCS-----SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCC-----CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEE
Confidence 999999 899999996 7999999999998 4433321110 1122356899999999998799999999999999
Q ss_pred EEECC-CCeEEEecccCcc----------------CC----------Ccccc--------e-e---eeeccceeeEEEec
Q 024317 185 QINLK-PEDCSKSSQSGSA----------------LG----------AVSVW--------V-L---VSVLSCLVSLVIGF 225 (269)
Q Consensus 185 ~~~~~-~~~~~~~~~~g~~----------------~g----------~~~~~--------~-~---~~~l~~p~gia~d~ 225 (269)
+|+.+ +..+..+.....+ .+ ....| . . ...+..|.+|++++
T Consensus 222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~ 301 (329)
T 3fvz_A 222 CFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE 301 (329)
T ss_dssp EEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT
T ss_pred EEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC
Confidence 99998 6655444221100 00 00000 0 0 12456799999999
Q ss_pred CCcEEEEcC-CCCccccc
Q 024317 226 VARPYIIRH-TGRLDPPL 242 (269)
Q Consensus 226 ~g~lyVad~-~g~~~~~~ 242 (269)
+|++||+|. +++++.-.
T Consensus 302 dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 302 DGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp TSEEEEEESSSCCEEEEE
T ss_pred CCCEEEEECCCCEEEEEe
Confidence 999999994 55555443
No 5
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.86 E-value=5.2e-20 Score=168.52 Aligned_cols=182 Identities=15% Similarity=0.128 Sum_probs=131.9
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCc-eEEEcC-CCCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPK-SFAVDM-KGNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~-giavd~-~G~lyVa 120 (269)
.+..|.++++++.+++|||+|. +++|+++|. ..+....+.+.+..+. .-..|. +|++++ +|+|||+
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~---~~~~~~~~~~~~~~g~--------~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDS-NKNFGRFNV---KTQEVTLIKQLELSGS--------LGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECT-TCEEEEEET---TTCCEEEEEECCCCSC--------CCCSSCCEEEEETTTTEEEEE
T ss_pred hcCCcEEEEEeCCCCeEEEEEC-CCcEEEEEC---CCCCEEEEecccccCC--------CCCCccccEEEeCCCCEEEEE
Confidence 4678999999876899999886 789999985 3445555543321110 112366 999999 6889999
Q ss_pred eCCCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEEC-CCCeEEEEE-CCCCeEEEec
Q 024317 121 DKSNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDH-GNQLIRQIN-LKPEDCSKSS 197 (269)
Q Consensus 121 D~~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~-~n~~I~~~~-~~~~~~~~~~ 197 (269)
|..+++|++++.+|. .+++|... ..+..++.+..++|..|++|+++++ |+|||+|. .+++|++|+ .++...+..+
T Consensus 285 d~~~~~I~~~~~~g~~~~~~g~~~-~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 285 DQNLSSVYKITPDGECEWFCGSAT-QKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp ETTTTEEEEECTTCCEEEEEECTT-CCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTTTCEEEEEETTTTEEEEEEE
T ss_pred eCCCCEEEEEecCCCEEEEEeCCC-CCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCCCCEEEEEECCCCEEEEEeC
Confidence 999999999999998 77877641 2234556667788999999999998 78999999 999999999 5555444444
Q ss_pred ccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCC-CCcc
Q 024317 198 QSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHT-GRLD 239 (269)
Q Consensus 198 ~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~-g~~~ 239 (269)
..+. .+..........+..|.|||+|++|+|||+|.. ++++
T Consensus 363 ~~~~-~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir 404 (409)
T 3hrp_A 363 QVDV-ASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIR 404 (409)
T ss_dssp CTTC-BSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEE
T ss_pred CCCC-CCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEE
Confidence 3211 110000112235788999999999999999954 4443
No 6
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=2.4e-20 Score=171.88 Aligned_cols=180 Identities=12% Similarity=0.060 Sum_probs=129.9
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEe
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVAD 121 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD 121 (269)
.+.+|.++++++.+++|||+|..+++|++++. ..+....+...+ ....|.+|+++++|+ |||+|
T Consensus 224 ~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~---~~~~~~~~~~~~------------~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 224 KGQNCNGAETHPINGELYFNSWNAGQVFRYDF---TTQETTPLFTIQ------------DSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp ECSSCCCEEECTTTCCEEEEETTTTEEEEEET---TTTEEEEEEECS------------SSSCCEEEEECTTSSEEEEEE
T ss_pred cCCCceEEEEeCCCCEEEEEECCCCEEEEEEC---CCCcEEEEEEcC------------CCCcceeEEEcCCCCEEEEEE
Confidence 36789999998668999999999999999974 233332332211 124799999999999 99999
Q ss_pred CCCCEEEEEeCCcc-------eEEecCCCCCCCCCCCccccccccCce-EEEEeC-------CCCEEEEEECCCCeEEEE
Q 024317 122 KSNHVIRKITNLGV-------TTIAGGGSKKEGRADGPAQNASFSNDF-ELTFVP-------HICALLISDHGNQLIRQI 186 (269)
Q Consensus 122 ~~n~~I~~~~~~g~-------~~~~g~~~~~~~~~~~~~~~~~l~~P~-gia~~~-------~~g~LyVaD~~n~~I~~~ 186 (269)
..+++|++++.++. .++++.. ...+..++....++|+.|. ++++++ .+++|||+|.+|+||++|
T Consensus 289 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i 367 (430)
T 3tc9_A 289 VNQHYILRSDYDWKTKRLTTPYIVCGQQ-GAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRIL 367 (430)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEECT-TCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEE
T ss_pred CCCCEEEEEeCCcccccccceEEEeccC-CCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEE
Confidence 99999999987752 3556542 1123445666678899999 899852 248999999999999999
Q ss_pred ECCCCeEEEecccCcc-CC--CcccceeeeeccceeeEEEec-CCcEEEEcC-CCCcc
Q 024317 187 NLKPEDCSKSSQSGSA-LG--AVSVWVLVSVLSCLVSLVIGF-VARPYIIRH-TGRLD 239 (269)
Q Consensus 187 ~~~~~~~~~~~~~g~~-~g--~~~~~~~~~~l~~p~gia~d~-~g~lyVad~-~g~~~ 239 (269)
+++|...+..+....+ .| .+. ......|..|.|||+|+ +|+|||+|. ++|++
T Consensus 368 ~~~G~v~~~~g~g~~~~~G~~dG~-~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr 424 (430)
T 3tc9_A 368 TPQGRVTTFAGRGSNGTSGYNDGD-LRQEARFNHPEGIVYDEERECFFIGDRENRRIR 424 (430)
T ss_dssp CTTSEEEEEEECCTTSSSSCBCEE-TTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred CCCCcEEEEEeCCCCCCCcccCCC-chhhcEeCCCcEEEEECCCCEEEEEECCCCeEE
Confidence 9988766666542100 11 110 11223578999999998 689999995 44444
No 7
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=1.4e-19 Score=160.04 Aligned_cols=171 Identities=16% Similarity=0.200 Sum_probs=128.5
Q ss_pred cCCCCcceEEEecCCCeEEEEeCCCC------------------------EEEEEecCCCCCccEEEEEcCCcccCCCCC
Q 024317 42 QLEINPHSVIDRPGSSDLIVLDSSRS------------------------AFYTLSFPLSEESVVKRLAGDGVQGYSDGE 97 (269)
Q Consensus 42 ~~~~~P~giav~~~~g~lyV~D~~~~------------------------~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~ 97 (269)
..+..|.+|+++ .+|++||++..++ +|+++|. .+|++....+.
T Consensus 21 ~~l~~v~~va~d-~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~---~~g~~~~~~~~--------- 87 (329)
T 3fvz_A 21 LLPGQVSGVALD-SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDP---NNAEILQSSGK--------- 87 (329)
T ss_dssp CCCSCEEEEEEC-TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECT---TTCCEEEEECT---------
T ss_pred eecCCceEEEEC-CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEEC---CCCeEEeccCC---------
Confidence 467889999996 5899999999884 5888852 35777665433
Q ss_pred cccccCCCCceEEEcCCCCEEEEeCCCCEEEEEeCCcc----eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEE
Q 024317 98 PGSARFDKPKSFAVDMKGNIYVADKSNHVIRKITNLGV----TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICAL 173 (269)
Q Consensus 98 ~~~~~~~~P~giavd~~G~lyVaD~~n~~I~~~~~~g~----~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~L 173 (269)
..|..|.+|++|++|+|||+|..+++|++++++|. ..+...+..+. ....+..|++|++++++++|
T Consensus 88 ---~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~-------~~~~~~~P~~ia~~~~~g~l 157 (329)
T 3fvz_A 88 ---NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGS-------DQNHFCQPTDVAVEPSTGAV 157 (329)
T ss_dssp ---TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCC-------STTCCSSEEEEEECTTTCCE
T ss_pred ---CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCC-------CccccCCCcEEEEeCCCCeE
Confidence 35789999999999999999999999999999885 33322211110 12358899999999955999
Q ss_pred EEEEC-CCCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecC-CcEEEEcC-CCCccc
Q 024317 174 LISDH-GNQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFV-ARPYIIRH-TGRLDP 240 (269)
Q Consensus 174 yVaD~-~n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~-g~lyVad~-~g~~~~ 240 (269)
||+|. .+++|++|+.++..+..++..+..... ....+..|.||++|++ |++||+|. +++++.
T Consensus 158 yv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~-----~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~ 222 (329)
T 3fvz_A 158 FVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSP-----RPGQFSVPHSLALVPHLDQLCVADRENGRIQC 222 (329)
T ss_dssp EEEECSSCCEEEEECTTSCEEEEECEECCSSSC-----CTTEESCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCC-----CCcccCCCcEEEEECCCCEEEEEECCCCEEEE
Confidence 99997 799999999999888777655322110 0115678999999998 89999994 444443
No 8
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.85 E-value=1.8e-20 Score=173.00 Aligned_cols=144 Identities=22% Similarity=0.341 Sum_probs=117.8
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCc---cEEEEEcC-CcccCCCCCcccccCCCCceEEE---------
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEES---VVKRLAGD-GVQGYSDGEPGSARFDKPKSFAV--------- 111 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g---~~~~~~g~-g~~g~~dg~~~~~~~~~P~giav--------- 111 (269)
..|.+|++++.++.|||+|..+|+|++++++. ..+ ...+++|. +..++.+|....++|+.|.+|++
T Consensus 273 ~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~-~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~d 351 (433)
T 4hw6_A 273 GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR-ETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGE 351 (433)
T ss_dssp SSCEEEEECTTSSEEEEEETTTTEEEEEEBCT-TTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTS
T ss_pred CCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC-CCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcccccccc
Confidence 34678999875556999999999999998641 223 34577776 66777777667789999999999
Q ss_pred cCCCCEEEEeCCCCEEEEEeCCcc-eEEecCCCC-CCCCCCC-ccccccccCceEEEEeCCCCEEEEEECCCCeEEEEEC
Q 024317 112 DMKGNIYVADKSNHVIRKITNLGV-TTIAGGGSK-KEGRADG-PAQNASFSNDFELTFVPHICALLISDHGNQLIRQINL 188 (269)
Q Consensus 112 d~~G~lyVaD~~n~~I~~~~~~g~-~~~~g~~~~-~~~~~~~-~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~ 188 (269)
|.+|+|||||+.|+||++++++|. .+++|.+.. ..++.++ .+..++|+.|++|++++.+++|||+|.+|+||++|++
T Consensus 352 d~~g~lyvaD~~n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 352 EDEYDFYFCDRDSHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp SCCEEEEEEETTTTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCCcEEEEECCCCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 999999999999999999999999 899987541 1234555 6677899999999999555999999999999999987
Q ss_pred C
Q 024317 189 K 189 (269)
Q Consensus 189 ~ 189 (269)
+
T Consensus 432 e 432 (433)
T 4hw6_A 432 E 432 (433)
T ss_dssp C
T ss_pred C
Confidence 5
No 9
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.84 E-value=5e-20 Score=168.65 Aligned_cols=138 Identities=23% Similarity=0.393 Sum_probs=118.3
Q ss_pred Ccc-eEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCC-cccCCCCCcccccCCCCceEEEcCCCCEEEEeC-
Q 024317 46 NPH-SVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDG-VQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK- 122 (269)
Q Consensus 46 ~P~-giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g-~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~- 122 (269)
.|. +|++++.+++|||+|..+++|+++ +.+|.+.+++|.+ ..++.++....++|+.|.+|++|++|+|||+|+
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~~~~I~~~----~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~ 342 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQNLSSVYKI----TPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF 342 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETTTTEEEEE----CTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT
T ss_pred CccccEEEeCCCCEEEEEeCCCCEEEEE----ecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC
Confidence 477 999987689999999999999999 5677788888875 566767755668899999999999999999999
Q ss_pred CCCEEEEEe-CCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC
Q 024317 123 SNHVIRKIT-NLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 123 ~n~~I~~~~-~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~ 189 (269)
.+++|++++ ++|. .+++|.+.. .+..++.+..++|..|++|+++++ ++|||+|..|+||++++++
T Consensus 343 ~~~~I~~~~~~~G~v~~~~g~~~~-~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 343 KGYCLRKLDILDGYVSTVAGQVDV-ASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTCEEEEEETTTTEEEEEEECTTC-BSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEEC
T ss_pred CCCEEEEEECCCCEEEEEeCCCCC-CCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEeC
Confidence 999999999 8898 888886322 344566667788999999999998 9999999999999999863
No 10
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=9.6e-20 Score=167.89 Aligned_cols=144 Identities=24% Similarity=0.350 Sum_probs=116.0
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc---EEEEEcC-CcccCCCCCcccccCCCCc-eEEE--------
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV---VKRLAGD-GVQGYSDGEPGSARFDKPK-SFAV-------- 111 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~---~~~~~g~-g~~g~~dg~~~~~~~~~P~-giav-------- 111 (269)
..|.+|++++.+..|||+|..+++|++++.+. ..+. +.+++|. +..++.++....++|+.|. ++++
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~-~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~ 348 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW-KTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGS 348 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEET-TTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTS
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCc-ccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEcccccccc
Confidence 57999999864445999999999999997531 1232 4567775 6667777655678899999 8999
Q ss_pred cCCCCEEEEeCCCCEEEEEeCCcc-eEEecCCCCC-CCCCCC-ccccccccCceEEEEeCCCCEEEEEECCCCeEEEEEC
Q 024317 112 DMKGNIYVADKSNHVIRKITNLGV-TTIAGGGSKK-EGRADG-PAQNASFSNDFELTFVPHICALLISDHGNQLIRQINL 188 (269)
Q Consensus 112 d~~G~lyVaD~~n~~I~~~~~~g~-~~~~g~~~~~-~~~~~~-~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~ 188 (269)
|++|+|||||..|+||++++++|. .+++|.+..+ .+..++ .+..++|+.|++|++++++++|||+|..|+||+++++
T Consensus 349 D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 349 SDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp SCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 467999999999999999999999 8888875422 233345 6777889999999999966999999999999999987
Q ss_pred C
Q 024317 189 K 189 (269)
Q Consensus 189 ~ 189 (269)
+
T Consensus 429 e 429 (430)
T 3tc9_A 429 E 429 (430)
T ss_dssp C
T ss_pred C
Confidence 5
No 11
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.82 E-value=6.1e-19 Score=158.14 Aligned_cols=153 Identities=17% Similarity=0.125 Sum_probs=119.1
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEe
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVAD 121 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD 121 (269)
.+..|.||++++.+++||++|..+++|.++++ +|....... ...+..|.+|++|+ +|.||++|
T Consensus 114 ~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~----dG~~~~~l~------------~~~l~~P~~iavdp~~g~ly~td 177 (349)
T 3v64_C 114 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANL----DGAHRKVLL------------WQSLEKPRAIALHPMEGTIYWTD 177 (349)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEET----TSCSCEEEE------------CTTCSCEEEEEEETTTTEEEEEE
T ss_pred CCCCccEEEEecCCCeEEEEcCCCCeEEEEcC----CCCceEEEE------------eCCCCCcceEEEecCcCeEEEec
Confidence 45689999998778999999999999999965 443222221 12477999999997 77899999
Q ss_pred CCC-CEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEeccc
Q 024317 122 KSN-HVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQS 199 (269)
Q Consensus 122 ~~n-~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~ 199 (269)
.++ ++|.+++.+|. ...... ..+..|+||+++++++.||++|..+++|++++.+|.....+...
T Consensus 178 ~~~~~~I~r~~~dG~~~~~~~~--------------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~ 243 (349)
T 3v64_C 178 WGNTPRIEASSMDGSGRRIIAD--------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ 243 (349)
T ss_dssp CSSSCEEEEEETTSCSCEESCC--------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred cCCCCEEEEEeCCCCCcEEEEE--------------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC
Confidence 998 99999999997 443321 12788999999987799999999999999999988654333222
Q ss_pred CccCCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCccc
Q 024317 200 GSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRLDP 240 (269)
Q Consensus 200 g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~~~ 240 (269)
.+..|.||+++ .+++|++| .++++..
T Consensus 244 --------------~~~~P~giav~-~~~ly~td~~~~~V~~ 270 (349)
T 3v64_C 244 --------------GLPHPFAITVF-EDSLYWTDWHTKSINS 270 (349)
T ss_dssp --------------SCSSEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred --------------CCCCceEEEEE-CCEEEEecCCCCeEEE
Confidence 24679999996 68999999 4555543
No 12
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.81 E-value=4.2e-18 Score=152.70 Aligned_cols=154 Identities=15% Similarity=0.136 Sum_probs=120.1
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEe
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVAD 121 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD 121 (269)
.+..|.+|++++.++.||++|..+++|+++++. .+....+.. ..+..|.||++|. .|+||++|
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~---g~~~~~~~~-------------~~~~~p~glavd~~~g~ly~~d 134 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLN---GSNVEEVVS-------------TGLESPGGLAVDWVHDKLYWTD 134 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT---SCSCEEEEC-------------SSCSCCCEEEEETTTTEEEEEE
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecC---CCCceEEEe-------------CCCCCccEEEEecCCCeEEEEc
Confidence 466899999987889999999999999999752 222333321 2357899999996 78899999
Q ss_pred CCCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC-CeEEEEECCCCeEEEeccc
Q 024317 122 KSNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN-QLIRQINLKPEDCSKSSQS 199 (269)
Q Consensus 122 ~~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n-~~I~~~~~~~~~~~~~~~~ 199 (269)
..+++|.+++.+|. ...... ..+..|++|+++|.++.||++|.++ ++|++++.+|.........
T Consensus 135 ~~~~~I~~~~~dG~~~~~l~~--------------~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~ 200 (349)
T 3v64_C 135 SGTSRIEVANLDGAHRKVLLW--------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT 200 (349)
T ss_dssp TTTTEEEEEETTSCSCEEEEC--------------TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS
T ss_pred CCCCeEEEEcCCCCceEEEEe--------------CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC
Confidence 99999999999997 333221 2278899999999879999999998 9999999998765544322
Q ss_pred CccCCCcccceeeeeccceeeEEEec-CCcEEEEcC-CCCccc
Q 024317 200 GSALGAVSVWVLVSVLSCLVSLVIGF-VARPYIIRH-TGRLDP 240 (269)
Q Consensus 200 g~~~g~~~~~~~~~~l~~p~gia~d~-~g~lyVad~-~g~~~~ 240 (269)
.+..|.||++|+ .++||++|. .+++..
T Consensus 201 --------------~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 201 --------------HLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp --------------SCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred --------------CCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 246799999995 669999994 444543
No 13
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.81 E-value=1.5e-18 Score=153.75 Aligned_cols=152 Identities=16% Similarity=0.108 Sum_probs=118.6
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEe
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVAD 121 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD 121 (269)
.+..|.|||+++.+++||++|..+++|.++++ +|....... ...+..|.+|++|+ .|.||++|
T Consensus 77 ~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~----dG~~~~~l~------------~~~~~~P~giavdp~~g~ly~td 140 (318)
T 3sov_A 77 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNL----DGSLRKVLF------------WQELDQPRAIALDPSSGFMYWTD 140 (318)
T ss_dssp CCSCCCEEEEETTTTEEEEEETTTTEEEEEET----TSCSCEEEE------------CSSCSSEEEEEEEGGGTEEEEEE
T ss_pred CCCCccEEEEEcCCCeEEEEECCCCEEEEEEC----CCCcEEEEE------------eCCCCCccEEEEeCCCCEEEEEe
Confidence 45689999998678999999999999999964 443222221 12467999999997 68899999
Q ss_pred CC-CCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecc
Q 024317 122 KS-NHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQ 198 (269)
Q Consensus 122 ~~-n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~ 198 (269)
.+ +++|.+++.+|. ..+... .+..|+||+++++++.||++|+.+++|++++.+|.....+..
T Consensus 141 ~~~~~~I~r~~~dG~~~~~~~~~---------------~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~ 205 (318)
T 3sov_A 141 WGEVPKIERAGMDGSSRFIIINS---------------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK 205 (318)
T ss_dssp CSSSCEEEEEETTSCSCEEEECS---------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred cCCCCEEEEEEcCCCCeEEEEEC---------------CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec
Confidence 75 799999999997 344321 278999999999779999999999999999999865444332
Q ss_pred cCccCCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCccc
Q 024317 199 SGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRLDP 240 (269)
Q Consensus 199 ~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~~~ 240 (269)
. .+..|.||+++ .+.+|++| .++++..
T Consensus 206 ~--------------~~~~P~glav~-~~~lywtd~~~~~V~~ 233 (318)
T 3sov_A 206 G--------------SLPHPFALTLF-EDILYWTDWSTHSILA 233 (318)
T ss_dssp S--------------CCSCEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred C--------------CCCCceEEEEe-CCEEEEEecCCCeEEE
Confidence 1 34779999998 56899999 4555553
No 14
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.81 E-value=4.4e-18 Score=154.54 Aligned_cols=153 Identities=15% Similarity=0.145 Sum_probs=120.7
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEe
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVAD 121 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD 121 (269)
.+..|.+|++++.++.||++|..+++|+++++. .+....+... .+..|.||++|. .|+||++|
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~---g~~~~~~~~~-------------~~~~p~glavd~~~g~lY~~d 177 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLN---GSNVEEVVST-------------GLESPGGLAVDWVHDKLYWTD 177 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT---SCCEEEEECS-------------SCSCCCCEEEETTTTEEEEEE
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecC---CCCcEEEEeC-------------CCCCccEEEEEeCCCeEEEEc
Confidence 466899999987789999999999999999642 2234444322 367899999996 78899999
Q ss_pred CCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC-CeEEEEECCCCeEEEecc
Q 024317 122 KSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN-QLIRQINLKPEDCSKSSQ 198 (269)
Q Consensus 122 ~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n-~~I~~~~~~~~~~~~~~~ 198 (269)
..+++|.+++.+|. ..+.. ..+..|++|+++|.++.||++|.++ ++|++++.+|........
T Consensus 178 ~~~~~I~~~~~dg~~~~~l~~---------------~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 242 (386)
T 3v65_B 178 SGTSRIEVANLDGAHRKVLLW---------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 242 (386)
T ss_dssp TTTTEEEECBTTSCSCEEEEC---------------SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred CCCCeEEEEeCCCCceEEeec---------------CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 99999999999987 33332 1278899999999889999999998 999999999876554433
Q ss_pred cCccCCCcccceeeeeccceeeEEEec-CCcEEEEcC-CCCccc
Q 024317 199 SGSALGAVSVWVLVSVLSCLVSLVIGF-VARPYIIRH-TGRLDP 240 (269)
Q Consensus 199 ~g~~~g~~~~~~~~~~l~~p~gia~d~-~g~lyVad~-~g~~~~ 240 (269)
. .+..|.||++|+ .++||++|. .++++.
T Consensus 243 ~--------------~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 243 T--------------HLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp S--------------SCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred C--------------CCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 2 246799999994 669999994 444543
No 15
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.80 E-value=1.9e-18 Score=156.98 Aligned_cols=151 Identities=19% Similarity=0.118 Sum_probs=118.2
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccE-EEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~-~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVa 120 (269)
.+..|.||++++.+++||++|..+++|.++++ +|.. ..+. ...+..|.+|++|+ +|.||++
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~----dg~~~~~l~-------------~~~l~~P~giavdp~~g~ly~t 219 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANL----DGAHRKVLL-------------WQSLEKPRAIALHPMEGTIYWT 219 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBT----TSCSCEEEE-------------CSSCSCEEEEEEETTTTEEEEE
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeC----CCCceEEee-------------cCCCCCCcEEEEEcCCCeEEEe
Confidence 45689999998778999999999999999964 4432 2222 12467999999996 6779999
Q ss_pred eCCC-CEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEec
Q 024317 121 DKSN-HVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSS 197 (269)
Q Consensus 121 D~~n-~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~ 197 (269)
|..+ ++|.+++.+|. ..+... .+..|+||+++++++.||++|..+++|++++.++.....+.
T Consensus 220 d~~~~~~I~r~~~dG~~~~~~~~~---------------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 284 (386)
T 3v65_B 220 DWGNTPRIEASSMDGSGRRIIADT---------------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI 284 (386)
T ss_dssp ECSSSCEEEEEETTSCSCEEEECS---------------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEE
T ss_pred ccCCCCEEEEEeCCCCCcEEEEEC---------------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEE
Confidence 9988 99999999997 344321 27789999999877999999999999999999886544332
Q ss_pred ccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCccc
Q 024317 198 QSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDP 240 (269)
Q Consensus 198 ~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~ 240 (269)
.. .+..|.||+++ .+.+|++|. ++++..
T Consensus 285 ~~--------------~~~~P~giav~-~~~ly~td~~~~~V~~ 313 (386)
T 3v65_B 285 SQ--------------GLPHPFAITVF-EDSLYWTDWHTKSINS 313 (386)
T ss_dssp CS--------------SCSSEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred EC--------------CCCCceEEEEE-CCEEEEeeCCCCeEEE
Confidence 22 24679999996 679999994 555543
No 16
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.80 E-value=4e-18 Score=150.66 Aligned_cols=154 Identities=17% Similarity=0.053 Sum_probs=119.3
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVa 120 (269)
.+..|.||+++..+++||++|..+++|.++++ +|. ..++.. ..+..|.+|++|+ +|.||++
T Consensus 75 ~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~----~g~~~~~~~~-------------~~~~~P~~iavdp~~g~ly~~ 137 (316)
T 1ijq_A 75 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT----KGVKRKTLFR-------------ENGSKPRAIVVDPVHGFMYWT 137 (316)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEET----TSSSEEEEEE-------------CTTCCEEEEEEETTTTEEEEE
T ss_pred CCCCcCEEEEeecCCeEEEEECCCCEEEEEeC----CCCceEEEEE-------------CCCCCcceEEeCCCCCEEEEE
Confidence 45789999997668999999999999999964 443 333321 2367999999997 7789999
Q ss_pred eCCC-CEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecc
Q 024317 121 DKSN-HVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQ 198 (269)
Q Consensus 121 D~~n-~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~ 198 (269)
|.++ ++|.+++.+|. ...... ..+..|+||+++++++.||++|..+++|.+++.+|.....+..
T Consensus 138 d~~~~~~I~~~~~dG~~~~~~~~--------------~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~ 203 (316)
T 1ijq_A 138 DWGTPAKIKKGGLNGVDIYSLVT--------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 203 (316)
T ss_dssp ECSSSCEEEEEETTSCCEEEEEC--------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE
T ss_pred ccCCCCeEEEEcCCCCCeEEEEE--------------CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEee
Confidence 9886 89999999998 443321 1278999999998889999999999999999999865444332
Q ss_pred cCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCccc
Q 024317 199 SGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDP 240 (269)
Q Consensus 199 ~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~ 240 (269)
. . ..+..|.||+++ .+++|++|. ++++..
T Consensus 204 ~----~--------~~~~~P~giav~-~~~ly~~d~~~~~V~~ 233 (316)
T 1ijq_A 204 D----E--------KRLAHPFSLAVF-EDKVFWTDIINEAIFS 233 (316)
T ss_dssp C----T--------TTTSSEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred c----C--------CccCCcEEEEEE-CCEEEEEECCCCeEEE
Confidence 1 0 034679999998 589999994 455553
No 17
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.79 E-value=1e-17 Score=148.07 Aligned_cols=155 Identities=17% Similarity=0.157 Sum_probs=117.6
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCC-ccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-SVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~-g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVa 120 (269)
.+..|.++++++.++.||++|..+++|+++++..... .....+. ...+..|.||++|. .++||++
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~-------------~~~~~~p~glavd~~~~~ly~~ 94 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-------------SRDIQAPDGLAVDWIHSNIYWT 94 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-------------CSSCSCCCEEEEETTTTEEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE-------------eCCCCCcCEEEEeecCCeEEEE
Confidence 4678999999877899999999999999997521000 1122222 12467999999995 7789999
Q ss_pred eCCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC-CeEEEEECCCCeEEEec
Q 024317 121 DKSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN-QLIRQINLKPEDCSKSS 197 (269)
Q Consensus 121 D~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n-~~I~~~~~~~~~~~~~~ 197 (269)
|..+++|.+++.+|. ..+.. ..+..|++|+++|.++.||++|.++ ++|.+++.+|.......
T Consensus 95 d~~~~~I~~~~~~g~~~~~~~~---------------~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~ 159 (316)
T 1ijq_A 95 DSVLGTVSVADTKGVKRKTLFR---------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 159 (316)
T ss_dssp ETTTTEEEEEETTSSSEEEEEE---------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred ECCCCEEEEEeCCCCceEEEEE---------------CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEE
Confidence 999999999999987 33332 1267899999999779999999986 89999999987665443
Q ss_pred ccCccCCCcccceeeeeccceeeEEEecC-CcEEEEcC-CCCcc
Q 024317 198 QSGSALGAVSVWVLVSVLSCLVSLVIGFV-ARPYIIRH-TGRLD 239 (269)
Q Consensus 198 ~~g~~~g~~~~~~~~~~l~~p~gia~d~~-g~lyVad~-~g~~~ 239 (269)
.. .+..|.||++|++ ++||++|. .+++.
T Consensus 160 ~~--------------~~~~P~gla~d~~~~~lY~~D~~~~~I~ 189 (316)
T 1ijq_A 160 TE--------------NIQWPNGITLDLLSGRLYWVDSKLHSIS 189 (316)
T ss_dssp CS--------------SCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EC--------------CCCCceEEEEeccCCEEEEEECCCCeEE
Confidence 22 2467999999964 69999994 44554
No 18
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.79 E-value=9.1e-18 Score=153.23 Aligned_cols=154 Identities=17% Similarity=0.043 Sum_probs=119.3
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVa 120 (269)
.+..|.|||++..+++||++|..+++|.++++ +|. ..+++. ..+..|.+|++|+ .|.||++
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~----~g~~~~~l~~-------------~~~~~P~~iavdp~~g~ly~t 219 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT----KGVKRKTLFR-------------ENGSKPRAIVVDPVHGFMYWT 219 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECT----TTCSEEEEEE-------------CSSCCEEEEEEETTTTEEEEE
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeC----CCCceEEEEe-------------CCCCCcceEEEecccCeEEEE
Confidence 46689999998668999999999999999964 444 333321 2477899999997 6789999
Q ss_pred eCC-CCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecc
Q 024317 121 DKS-NHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQ 198 (269)
Q Consensus 121 D~~-n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~ 198 (269)
|.+ +++|.+++.+|. ...... ..+..|+||++|++++.||++|..+++|++++.+|.....+..
T Consensus 220 d~~~~~~I~~~~~dG~~~~~~~~--------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~ 285 (400)
T 3p5b_L 220 DWGTPAKIKKGGLNGVDIYSLVT--------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 285 (400)
T ss_dssp ECSSSCCEEEEETTSCSCEEEEC--------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEE
T ss_pred eCCCCCEEEEEeCCCCccEEEEE--------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEe
Confidence 987 589999999997 333221 1278999999998889999999999999999999875544432
Q ss_pred cCccCCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCccc
Q 024317 199 SGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRLDP 240 (269)
Q Consensus 199 ~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~~~ 240 (269)
. .+ .+..|.||+++ .+++|++| .+++++.
T Consensus 286 ~---~~---------~l~~P~gl~v~-~~~lywtd~~~~~V~~ 315 (400)
T 3p5b_L 286 D---EK---------RLAHPFSLAVF-EDKVFWTDIINEAIFS 315 (400)
T ss_dssp C---SS---------TTSSEEEEEEE-TTEEEEEESSSCSEEE
T ss_pred C---CC---------CCCCCEEEEEe-CCEEEEecCCCCeEEE
Confidence 1 00 34779999996 57899999 4556553
No 19
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.79 E-value=8.1e-18 Score=153.56 Aligned_cols=156 Identities=16% Similarity=0.141 Sum_probs=119.4
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCC-CccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSE-ESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~-~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVa 120 (269)
.+..|.+|++++.++.||++|..+++|+++++.... .+....++. ..+..|.||++|. .++||++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~-------------~~~~~p~glavD~~~~~lY~~ 176 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-------------RDIQAPDGLAVDWIHSNIYWT 176 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC-------------SSCSCEEEEEEETTTTEEEEE
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe-------------CCCCCcccEEEEecCCceEEE
Confidence 467999999987789999999999999999752100 012233332 2467999999997 7889999
Q ss_pred eCCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-CCeEEEEECCCCeEEEec
Q 024317 121 DKSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-NQLIRQINLKPEDCSKSS 197 (269)
Q Consensus 121 D~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-n~~I~~~~~~~~~~~~~~ 197 (269)
|..+++|.+++.+|. ..+.. ..+..|.+|+++|.++.||++|.+ +++|++++.+|.......
T Consensus 177 d~~~~~I~~~~~~g~~~~~l~~---------------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 177 DSVLGTVSVADTKGVKRKTLFR---------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp ETTTTEEEEECTTTCSEEEEEE---------------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred ECCCCeEEEEeCCCCceEEEEe---------------CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 999999999999997 33332 127889999999987999999987 489999999987654443
Q ss_pred ccCccCCCcccceeeeeccceeeEEEec-CCcEEEEcC-CCCccc
Q 024317 198 QSGSALGAVSVWVLVSVLSCLVSLVIGF-VARPYIIRH-TGRLDP 240 (269)
Q Consensus 198 ~~g~~~g~~~~~~~~~~l~~p~gia~d~-~g~lyVad~-~g~~~~ 240 (269)
.. .+..|.||++|+ .++||++|. .++++.
T Consensus 242 ~~--------------~l~~P~glavd~~~~~lY~aD~~~~~I~~ 272 (400)
T 3p5b_L 242 TE--------------NIQWPNGITLDLLSGRLYWVDSKLHSISS 272 (400)
T ss_dssp CS--------------SCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EC--------------CCCceEEEEEEeCCCEEEEEECCCCEEEE
Confidence 22 346799999995 569999994 445543
No 20
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.78 E-value=2.2e-17 Score=141.54 Aligned_cols=152 Identities=14% Similarity=0.048 Sum_probs=115.6
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEeCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADKS 123 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD~~ 123 (269)
.+|+++++++.+++||++|..+++|+++++. .+....+.. ..+..|.+|++|+ .++|||+|..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~---g~~~~~~~~-------------~~~~~p~~ia~d~~~~~lyv~d~~ 99 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLH---GGEPTTIIR-------------QDLGSPEGIALDHLGRTIFWTDSQ 99 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESS---SCCCEEEEC-------------TTCCCEEEEEEETTTTEEEEEETT
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecC---CCCcEEEEE-------------CCCCCccEEEEEecCCeEEEEECC
Confidence 4789999987789999999999999999752 222333321 2357999999998 5779999999
Q ss_pred CCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC--CCeEEEEECCCCeEEEeccc
Q 024317 124 NHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG--NQLIRQINLKPEDCSKSSQS 199 (269)
Q Consensus 124 n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~--n~~I~~~~~~~~~~~~~~~~ 199 (269)
+++|.+++.+|. ..+... .+..|++|+++++++.|||+|.. +++|++++.++.........
T Consensus 100 ~~~I~~~~~~g~~~~~~~~~---------------~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~ 164 (267)
T 1npe_A 100 LDRIEVAKMDGTQRRVLFDT---------------GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD 164 (267)
T ss_dssp TTEEEEEETTSCSCEEEECS---------------SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT
T ss_pred CCEEEEEEcCCCCEEEEEEC---------------CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC
Confidence 999999999986 333321 26789999999977999999987 68999999987654332211
Q ss_pred CccCCCcccceeeeeccceeeEEEecC-CcEEEEcC-CCCcccc
Q 024317 200 GSALGAVSVWVLVSVLSCLVSLVIGFV-ARPYIIRH-TGRLDPP 241 (269)
Q Consensus 200 g~~~g~~~~~~~~~~l~~p~gia~d~~-g~lyVad~-~g~~~~~ 241 (269)
.+..|.||++|++ ++||++|. .+++...
T Consensus 165 --------------~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 165 --------------NLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp --------------TCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred --------------CCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 2367999999996 48999995 4555433
No 21
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.78 E-value=1.1e-17 Score=164.34 Aligned_cols=154 Identities=17% Similarity=0.053 Sum_probs=120.7
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVa 120 (269)
.+..|.|||++..+++||++|..+++|.++++ +|. ..+++. ..+..|.+|++|+ .|.||++
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l----dG~~~~~l~~-------------~~l~~P~gIaVDp~~g~LYwt 531 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT----KGVKRKTLFR-------------ENGSKPRAIVVDPVHGFMYWT 531 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEET----TSSSEEEEEE-------------CTTCCEEEEEEETTTTEEEEE
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeC----CCCeEEEEEe-------------CCCCCcceEEEecCCCCEEEe
Confidence 56789999998778899999999999999975 444 333321 2467899999998 5889999
Q ss_pred eCCC-CEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecc
Q 024317 121 DKSN-HVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQ 198 (269)
Q Consensus 121 D~~n-~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~ 198 (269)
|.++ ++|.+++.+|. ...... ..+..|+||++|+.++.|||+|..+++|++++.+|.....+..
T Consensus 532 D~g~~~~I~~~~~dG~~~~~lv~--------------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~ 597 (791)
T 3m0c_C 532 DWGTPAKIKKGGLNGVDIYSLVT--------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 597 (791)
T ss_dssp ECSSSCEEEEEETTSCCEEEEEC--------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE
T ss_pred cCCCCCeEEEEecCCCceEEEEe--------------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEec
Confidence 9886 89999999998 433322 2278999999998889999999999999999999876554432
Q ss_pred cCccCCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCccc
Q 024317 199 SGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRLDP 240 (269)
Q Consensus 199 ~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~~~ 240 (269)
.. ..+..|.+|+++ .++||++| .+++++.
T Consensus 598 ~~------------~~l~~P~glav~-~~~lYwtD~~~~~I~~ 627 (791)
T 3m0c_C 598 DE------------KRLAHPFSLAVF-EDKVFWTDIINEAIFS 627 (791)
T ss_dssp CT------------TTTSSEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred CC------------CccCCCCEEEEe-CCEEEEEECCCCEEEE
Confidence 20 134779999997 46999999 4555553
No 22
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.78 E-value=1.7e-17 Score=147.03 Aligned_cols=154 Identities=13% Similarity=0.084 Sum_probs=117.3
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEeC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADK 122 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD~ 122 (269)
+..|.+|++++.++.||++|..+++|+++++. .......+. ...+..|.||++|. .|+||++|.
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~--g~~~~~~~~-------------~~~l~~p~glavd~~~g~ly~~d~ 98 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFN--KTESVQNVV-------------VSGLLSPDGLACDWLGEKLYWTDS 98 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETT--SSSCCCEEE-------------EECCSCCCEEEEETTTTEEEEEET
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEcc--CCCceEEEE-------------cCCCCCccEEEEEcCCCeEEEEEC
Confidence 34789999987789999999999999999752 111111111 12367899999996 788999999
Q ss_pred CCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-CCeEEEEECCCCeEEEecccC
Q 024317 123 SNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-NQLIRQINLKPEDCSKSSQSG 200 (269)
Q Consensus 123 ~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-n~~I~~~~~~~~~~~~~~~~g 200 (269)
.+++|.+++.+|. ...... ..+..|++|++++.++.||++|.+ +++|++++.+|.........
T Consensus 99 ~~~~I~~~~~dG~~~~~l~~--------------~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~- 163 (318)
T 3sov_A 99 ETNRIEVSNLDGSLRKVLFW--------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS- 163 (318)
T ss_dssp TTTEEEEEETTSCSCEEEEC--------------SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS-
T ss_pred CCCEEEEEECCCCcEEEEEe--------------CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC-
Confidence 9999999999997 333221 127889999999977999999976 78999999998755443322
Q ss_pred ccCCCcccceeeeeccceeeEEEec-CCcEEEEcC-CCCccc
Q 024317 201 SALGAVSVWVLVSVLSCLVSLVIGF-VARPYIIRH-TGRLDP 240 (269)
Q Consensus 201 ~~~g~~~~~~~~~~l~~p~gia~d~-~g~lyVad~-~g~~~~ 240 (269)
.+..|.||++|+ .++||++|. .++++.
T Consensus 164 -------------~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 164 -------------EIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp -------------SCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -------------CCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 246799999997 669999994 455543
No 23
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=4.4e-17 Score=140.14 Aligned_cols=153 Identities=15% Similarity=0.169 Sum_probs=119.9
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
.+..|.+|+++ .+|++||++..+++|++++ .+|+.....+. ...+..|.+|++|++|++||+|.
T Consensus 119 ~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~----~~g~~~~~~~~-----------~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 119 ILQHPRGVTVD-NKGRIIVVECKVMRVIIFD----QNGNVLHKFGC-----------SKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp TCSCEEEEEEC-TTSCEEEEETTTTEEEEEC----TTSCEEEEEEC-----------TTTCSSEEEEEECSSSEEEEEEG
T ss_pred cCCCceEEEEe-CCCCEEEEECCCCEEEEEc----CCCCEEEEeCC-----------CCccCCcEEEEECCCCCEEEEEC
Confidence 45689999996 4789999999999999994 56665544432 12356899999999999999999
Q ss_pred CCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC-eEEEEECCCCeEEEeccc
Q 024317 123 SNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ-LIRQINLKPEDCSKSSQS 199 (269)
Q Consensus 123 ~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~-~I~~~~~~~~~~~~~~~~ 199 (269)
.+++|++++++|. ..+... ..+..|.+|+++++ |+|||++..++ +|++|+.++..+..+...
T Consensus 183 ~~~~i~~~~~~g~~~~~~~~~--------------g~~~~p~~i~~d~~-G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~ 247 (286)
T 1q7f_A 183 RAHCVKVFNYEGQYLRQIGGE--------------GITNYPIGVGINSN-GEILIADNHNNFNLTIFTQDGQLISALESK 247 (286)
T ss_dssp GGTEEEEEETTCCEEEEESCT--------------TTSCSEEEEEECTT-CCEEEEECSSSCEEEEECTTSCEEEEEEES
T ss_pred CCCEEEEEcCCCCEEEEEccC--------------CccCCCcEEEECCC-CCEEEEeCCCCEEEEEECCCCCEEEEEccc
Confidence 9999999999887 333321 12678999999997 89999999886 999999988766554332
Q ss_pred CccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCcc
Q 024317 200 GSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRLD 239 (269)
Q Consensus 200 g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~~ 239 (269)
. ....|.+|+++++|++||++.++++.
T Consensus 248 ----~---------~~~~~~~i~~~~~g~l~vs~~~~~v~ 274 (286)
T 1q7f_A 248 ----V---------KHAQCFDVALMDDGSVVLASKDYRLY 274 (286)
T ss_dssp ----S---------CCSCEEEEEEETTTEEEEEETTTEEE
T ss_pred ----C---------CCCcceeEEECCCCcEEEECCCCeEE
Confidence 0 12458999999999999998665553
No 24
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.77 E-value=1.8e-17 Score=162.94 Aligned_cols=155 Identities=16% Similarity=0.139 Sum_probs=119.7
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCC-CccEEEEEcCCcccCCCCCcccccCCCCceEEEcCC-CCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSE-ESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK-GNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~-~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~-G~lyVa 120 (269)
.+..|.+|+++..++.||++|..+++|+++++.... .+....++. ..+..|.|||+|.. ++||++
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~-------------~~l~~P~GLAvD~~~~~LY~t 488 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-------------RDIQAPDGLAVDWIHSNIYWT 488 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-------------SSCSCCCEEEEETTTTEEEEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe-------------cCCCCcceeeeeecCCcEEEE
Confidence 467899999987789999999999999999753100 012333332 24779999999975 479999
Q ss_pred eCCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC-CeEEEEECCCCeEEEec
Q 024317 121 DKSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN-QLIRQINLKPEDCSKSS 197 (269)
Q Consensus 121 D~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n-~~I~~~~~~~~~~~~~~ 197 (269)
|..+++|++++.+|. .++.. ..+..|.+||+++..+.||++|.++ ++|++++++|.....+.
T Consensus 489 D~~~~~I~v~~ldG~~~~~l~~---------------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 489 DSVLGTVSVADTKGVKRKTLFR---------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp ETTTTEEEEEETTSSSEEEEEE---------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred ecCCCeEEEEeCCCCeEEEEEe---------------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 999999999999998 44433 1277899999999889999999987 89999999998766554
Q ss_pred ccCccCCCcccceeeeeccceeeEEEe-cCCcEEEEcC-CCCcc
Q 024317 198 QSGSALGAVSVWVLVSVLSCLVSLVIG-FVARPYIIRH-TGRLD 239 (269)
Q Consensus 198 ~~g~~~g~~~~~~~~~~l~~p~gia~d-~~g~lyVad~-~g~~~ 239 (269)
.. .+..|.||++| ..++||++|. .++|+
T Consensus 554 ~~--------------~l~~P~GLavD~~~~~LYwaD~~~~~I~ 583 (791)
T 3m0c_C 554 TE--------------NIQWPNGITLDLLSGRLYWVDSKLHSIS 583 (791)
T ss_dssp CS--------------SCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eC--------------CCCCceEEEEecCCCeEEEEeCCCCcEE
Confidence 33 34679999999 5679999994 34444
No 25
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.77 E-value=2.3e-17 Score=141.40 Aligned_cols=153 Identities=16% Similarity=0.099 Sum_probs=116.9
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVa 120 (269)
.+..|.+|++++.+++|||+|..+++|.++++ +|. ...+.. ..+..|.+|++|+ +|.|||+
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~----~g~~~~~~~~-------------~~~~~P~~i~vd~~~g~lyv~ 139 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM----DGTQRRVLFD-------------TGLVNPRGIVTDPVRGNLYWT 139 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEET----TSCSCEEEEC-------------SSCSSEEEEEEETTTTEEEEE
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEc----CCCCEEEEEE-------------CCCCCccEEEEeeCCCEEEEE
Confidence 35689999998668999999999999999975 332 222221 1356899999999 6789999
Q ss_pred eCC--CCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEec
Q 024317 121 DKS--NHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSS 197 (269)
Q Consensus 121 D~~--n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~ 197 (269)
|.. +++|.+++.+|. ...... ..+..|++|+++++++.|||+|..+++|++++.++.......
T Consensus 140 ~~~~~~~~I~~~~~dg~~~~~~~~--------------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~ 205 (267)
T 1npe_A 140 DWNRDNPKIETSHMDGTNRRILAQ--------------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL 205 (267)
T ss_dssp ECCSSSCEEEEEETTSCCCEEEEC--------------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE
T ss_pred ECCCCCcEEEEEecCCCCcEEEEE--------------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEe
Confidence 987 689999999987 333221 126789999999987899999999999999999875443321
Q ss_pred ccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCccccc
Q 024317 198 QSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDPPL 242 (269)
Q Consensus 198 ~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~~~ 242 (269)
. .+..|.||++| .+++||++. ++++...+
T Consensus 206 ~---------------~~~~P~gi~~d-~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 206 E---------------GLQYPFAVTSY-GKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp E---------------CCCSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred c---------------CCCCceEEEEe-CCEEEEEECCCCeEEEEe
Confidence 1 23669999999 689999995 46665444
No 26
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=1.2e-16 Score=137.35 Aligned_cols=156 Identities=17% Similarity=0.166 Sum_probs=121.9
Q ss_pred CCCCcceEEEecCCCeEEEEeCC-CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEe
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSS-RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~-~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD 121 (269)
.+..|.+|++++.++++||++.. +++|+++| .+|+.....+. ..+..|.+|+++++|++||+|
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d----~~g~~~~~~~~------------~~~~~~~~i~~~~~g~l~v~~ 138 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN----QYGQFVRKFGA------------TILQHPRGVTVDNKGRIIVVE 138 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC----TTSCEEEEECT------------TTCSCEEEEEECTTSCEEEEE
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC----CCCcEEEEecC------------ccCCCceEEEEeCCCCEEEEE
Confidence 46789999996568999999975 89999994 56766554322 135689999999999999999
Q ss_pred CCCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccC
Q 024317 122 KSNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSG 200 (269)
Q Consensus 122 ~~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g 200 (269)
..+++|.+++++|. ....+.. ..+..|++|+++++ |+|||+|..+++|++|+.++..+..+...
T Consensus 139 ~~~~~i~~~~~~g~~~~~~~~~-------------~~~~~p~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~- 203 (286)
T 1q7f_A 139 CKVMRVIIFDQNGNVLHKFGCS-------------KHLEFPNGVVVNDK-QEIFISDNRAHCVKVFNYEGQYLRQIGGE- 203 (286)
T ss_dssp TTTTEEEEECTTSCEEEEEECT-------------TTCSSEEEEEECSS-SEEEEEEGGGTEEEEEETTCCEEEEESCT-
T ss_pred CCCCEEEEEcCCCCEEEEeCCC-------------CccCCcEEEEECCC-CCEEEEECCCCEEEEEcCCCCEEEEEccC-
Confidence 99999999999887 3333221 12678999999997 89999999999999999988766555432
Q ss_pred ccCCCcccceeeeeccceeeEEEecCCcEEEEcCCC--Ccccc
Q 024317 201 SALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTG--RLDPP 241 (269)
Q Consensus 201 ~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g--~~~~~ 241 (269)
+ .+..|.+|++|++|++||++..+ ++...
T Consensus 204 ---g---------~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~ 234 (286)
T 1q7f_A 204 ---G---------ITNYPIGVGINSNGEILIADNHNNFNLTIF 234 (286)
T ss_dssp ---T---------TSCSEEEEEECTTCCEEEEECSSSCEEEEE
T ss_pred ---C---------ccCCCcEEEECCCCCEEEEeCCCCEEEEEE
Confidence 1 23679999999999999999543 45433
No 27
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.76 E-value=2e-17 Score=158.89 Aligned_cols=151 Identities=13% Similarity=0.116 Sum_probs=118.4
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccE-EEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~-~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVa 120 (269)
.+..|.|||++..+++||++|..+++|.++++ +|.. .++. ...|+.|.+|++|+ +|.||++
T Consensus 390 ~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~----~G~~~~~l~-------------~~~l~~P~~iavdp~~G~ly~t 452 (619)
T 3s94_A 390 QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRL----NGTMRKILI-------------SEDLEEPRAIVLDPMVGYMYWT 452 (619)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEET----TSCSCEEEE-------------CTTCCSEEEEEEETTTTEEEEE
T ss_pred CCCCcCceEEecccCcEEEEeCCCCcEEEEeC----CCCeEEEEE-------------ECCCCCeeeEEEEcCCCcEEEe
Confidence 46789999997678999999999999999965 4443 2332 12488999999998 5999999
Q ss_pred eCCC-CEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecc
Q 024317 121 DKSN-HVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQ 198 (269)
Q Consensus 121 D~~n-~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~ 198 (269)
|.++ .+|.+++.+|. ...... ..+..|+||++|++++.||++|..+++|++++.+|........
T Consensus 453 D~g~~~~I~r~~~dG~~~~~l~~--------------~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~ 518 (619)
T 3s94_A 453 DWGEIPKIERAALDGSDRVVLVN--------------TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVE 518 (619)
T ss_dssp ECSSSCEEEEEETTSCSCEEEEC--------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEE
T ss_pred cCCCCCEEEEEccCCCccEEEEe--------------CCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEec
Confidence 9875 89999999998 433322 1378999999998779999999999999999998875543322
Q ss_pred cCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCcc
Q 024317 199 SGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLD 239 (269)
Q Consensus 199 ~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~ 239 (269)
. .+..|.||+++. ++||++|. +++++
T Consensus 519 ~--------------~l~~P~glav~~-~~ly~tD~~~~~I~ 545 (619)
T 3s94_A 519 D--------------KIPHIFGFTLLG-DYVYWTDWQRRSIE 545 (619)
T ss_dssp C--------------CCCSSCCEEEET-TEEEEECTTSSCEE
T ss_pred c--------------CCCCcEEEEEEC-CEEEEeecCCCeEE
Confidence 1 346799999995 49999994 44443
No 28
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.76 E-value=4.5e-17 Score=156.49 Aligned_cols=153 Identities=13% Similarity=0.083 Sum_probs=119.8
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc--EEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV--VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYV 119 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~--~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyV 119 (269)
.+..|.+|++++.++.||++|..+++|+++++ +|. ...+.. ..+..|.|||+|. .++||+
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~----~g~~~~~~v~~-------------~~~~~P~GlAvD~~~~~ly~ 100 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEF----NKTESVQNVVV-------------SGLLSPDGLACDWLGEKLYW 100 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEEC-------------SSCSCEEEEEEETTTTEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEc----cCCCceEEEEe-------------CCCCCcCeEEEEecCCEEEE
Confidence 57789999998889999999999999999964 333 233332 2366899999998 677999
Q ss_pred EeCCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-CCeEEEEECCCCeEEEe
Q 024317 120 ADKSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-NQLIRQINLKPEDCSKS 196 (269)
Q Consensus 120 aD~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-n~~I~~~~~~~~~~~~~ 196 (269)
+|..+++|.+++.+|. ..+.. ..+..|.+|+++|.+|.||++|.+ +.+|.+++.+|......
T Consensus 101 ~d~~~~~I~v~~~dG~~~~~l~~---------------~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l 165 (619)
T 3s94_A 101 TDSETNRIEVSNLDGSLRKVLFW---------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 165 (619)
T ss_dssp EETTTTEEEEEETTSCSCEEEEC---------------SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred EeCCCCEEEEEECCCCCEEEEEe---------------CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEE
Confidence 9999999999999998 44432 127899999999988999999987 67999999998765444
Q ss_pred cccCccCCCcccceeeeeccceeeEEEecC-CcEEEEcC-CCCcccc
Q 024317 197 SQSGSALGAVSVWVLVSVLSCLVSLVIGFV-ARPYIIRH-TGRLDPP 241 (269)
Q Consensus 197 ~~~g~~~g~~~~~~~~~~l~~p~gia~d~~-g~lyVad~-~g~~~~~ 241 (269)
... .+..|.||++|.+ ++||++|. .++++.-
T Consensus 166 ~~~--------------~~~~P~Glald~~~~~LY~aD~~~~~I~~~ 198 (619)
T 3s94_A 166 INS--------------EIYWPNGLTLDYEEQKLYWADAKLNFIHKS 198 (619)
T ss_dssp ECS--------------SCSSEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EeC--------------CCCCCcEEEEEccCCEEEEEeCCCCeEEEe
Confidence 322 2467999999974 69999994 4555533
No 29
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.76 E-value=3.5e-17 Score=157.41 Aligned_cols=147 Identities=16% Similarity=0.149 Sum_probs=119.1
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEe
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVAD 121 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD 121 (269)
.+..|.|||++...++||++|..+++|.++++ +|+...... ...++.|.+|++|+ +|.||++|
T Consensus 387 ~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~----~G~~~~~l~------------~~~l~~Pr~iavdp~~g~ly~tD 450 (628)
T 4a0p_A 387 LEIQPYDLSIDIYSRYIYWTCEATNVINVTRL----DGRSVGVVL------------KGEQDRPRAVVVNPEKGYMYFTN 450 (628)
T ss_dssp -CCCEEEEEEETTTTEEEEEETTTTEEEEEET----TSCEEEEEE------------ECTTCCEEEEEEETTTTEEEEEE
T ss_pred ccCCcceEEeeccCCeEEEEcCCCCEEEEEEC----CCCeEEEEE------------eCCCCceeeEEEecCCCeEEEee
Confidence 46689999998767999999999999999954 666554331 12477999999999 89999999
Q ss_pred CCCC--EEEEEeCCcc-e-EEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEec
Q 024317 122 KSNH--VIRKITNLGV-T-TIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSS 197 (269)
Q Consensus 122 ~~n~--~I~~~~~~g~-~-~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~ 197 (269)
.+++ +|.+++.+|. . .+... .+..|+||++|++++.||++|..+++|.+++.+|.....+.
T Consensus 451 ~g~~~~~I~r~~~dG~~~~~l~~~---------------~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~ 515 (628)
T 4a0p_A 451 LQERSPKIERAALDGTEREVLFFS---------------GLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLE 515 (628)
T ss_dssp EETTEEEEEEEETTSCSCEEEECS---------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred cCCCCCeEEEEeCCCCCcEEEEec---------------cCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEE
Confidence 9877 7999999998 4 44321 27899999999988999999999999999999987655443
Q ss_pred ccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCC
Q 024317 198 QSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHT 235 (269)
Q Consensus 198 ~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~ 235 (269)
.. .+..|.|||++. ++||++|..
T Consensus 516 ~~--------------~~~~P~glav~~-~~ly~tD~~ 538 (628)
T 4a0p_A 516 DS--------------NILQPVGLTVFE-NWLYWIDKQ 538 (628)
T ss_dssp CS--------------SCSCEEEEEEET-TEEEEEETT
T ss_pred cC--------------CCCCcEEEEEEC-CEEEEEECC
Confidence 22 347799999996 899999943
No 30
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.74 E-value=5.9e-17 Score=155.88 Aligned_cols=149 Identities=16% Similarity=0.098 Sum_probs=118.3
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccE-EEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~-~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVa 120 (269)
.+..|.|||++...++||++|..+++|.++++ +|.. .++. ...+..|.+|++|+ +|.||++
T Consensus 78 g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~----dG~~~~~l~-------------~~~l~~P~~iavdp~~G~lY~t 140 (628)
T 4a0p_A 78 GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKL----DGQHRQVLV-------------WKDLDSPRALALDPAEGFMYWT 140 (628)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEET----TSTTCEEEE-------------CSSCCCEEEEEEETTTTEEEEE
T ss_pred CCCCcceEEEEeCCCEEEEEECCCCEEEEEec----CCCcEEEEE-------------eCCCCCcccEEEccCCCeEEEe
Confidence 34689999998778999999999999999975 3432 2222 12477999999997 7899999
Q ss_pred eCC-CCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEec
Q 024317 121 DKS-NHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSS 197 (269)
Q Consensus 121 D~~-n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~ 197 (269)
|.+ +.+|.+++.+|. ..+.. .+..|+||++|++++.||++|..+++|++++.+|.......
T Consensus 141 D~g~~~~I~r~~~dG~~~~~l~~----------------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~ 204 (628)
T 4a0p_A 141 EWGGKPKIDRAAMDGSERTTLVP----------------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIA 204 (628)
T ss_dssp ECSSSCEEEEEETTSCSCEEEEC----------------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCCCCCEEEEEeCCCCceEEEEC----------------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEee
Confidence 976 789999999998 44432 17899999999988999999999999999999886443221
Q ss_pred ccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCccc
Q 024317 198 QSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDP 240 (269)
Q Consensus 198 ~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~ 240 (269)
..+..|.||+++. +++|++|. ++++..
T Consensus 205 ---------------~~l~~P~glav~~-~~ly~tD~~~~~I~~ 232 (628)
T 4a0p_A 205 ---------------DDLPHPFGLTQYQ-DYIYWTDWSRRSIER 232 (628)
T ss_dssp ---------------ECCSCEEEEEEET-TEEEEEETTTTEEEE
T ss_pred ---------------ccCCCceEEEEEC-CEEEEecCCCCEEEE
Confidence 0347799999996 89999994 555553
No 31
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.70 E-value=3.7e-16 Score=132.77 Aligned_cols=151 Identities=13% Similarity=0.190 Sum_probs=114.0
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~ 123 (269)
+..|.+|+++ .+|++||++..+++|++++. ........ ....+..|.+|+++++|+|||+|..
T Consensus 107 ~~~p~~i~~~-~~g~l~v~~~~~~~i~~~~~---~~~~~~~~-------------~~~~~~~p~~i~~~~~g~l~v~~~~ 169 (270)
T 1rwi_B 107 LNYPEGLAVD-TQGAVYVADRGNNRVVKLAA---GSKTQTVL-------------PFTGLNDPDGVAVDNSGNVYVTDTD 169 (270)
T ss_dssp CSSEEEEEEC-TTCCEEEEEGGGTEEEEECT---TCCSCEEC-------------CCCSCCSCCCEEECTTCCEEEEEGG
T ss_pred cCCCcceEEC-CCCCEEEEECCCCEEEEEEC---CCceeEee-------------ccccCCCceeEEEeCCCCEEEEECC
Confidence 4679999996 47899999999999999952 22221111 1123568999999999999999999
Q ss_pred CCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 124 NHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 124 n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
+++|.+++.++. ...... ..+..|.+|+++++ |+|||++..+++|++++.++.........
T Consensus 170 ~~~i~~~~~~~~~~~~~~~--------------~~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~~~~~~~~~~~--- 231 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLPF--------------TDITAPWGIAVDEA-GTVYVTEHNTNQVVKLLAGSTTSTVLPFT--- 231 (270)
T ss_dssp GTEEEEECTTTCCEEECCC--------------SSCCSEEEEEECTT-CCEEEEETTTSCEEEECTTCSCCEECCCC---
T ss_pred CCEEEEEecCCCceEeecc--------------cCCCCceEEEECCC-CCEEEEECCCCcEEEEcCCCCcceeeccC---
Confidence 999999998876 332211 12578999999997 79999999999999999887654432111
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCccc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDP 240 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~ 240 (269)
.+..|.+|+++++|++||++. ++++..
T Consensus 232 -----------~~~~p~~i~~~~~g~l~v~~~~~~~v~~ 259 (270)
T 1rwi_B 232 -----------GLNTPLAVAVDSDRTVYVADRGNDRVVK 259 (270)
T ss_dssp -----------SCSCEEEEEECTTCCEEEEEGGGTEEEE
T ss_pred -----------CCCCceeEEECCCCCEEEEECCCCEEEE
Confidence 236799999999999999994 455543
No 32
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.69 E-value=1e-15 Score=134.63 Aligned_cols=149 Identities=13% Similarity=0.072 Sum_probs=108.3
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEeCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADKS 123 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD~~ 123 (269)
..|.+|++++.+++|||+|.. +.|+++|. .++.+..+.... ....++.|++|++|+ +|+|||+|..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~-~~i~~~d~---~~g~~~~~~~~~---------~~~~~~~p~~i~~d~~~G~l~v~d~~ 146 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCY-YHLSVVGS---EGGHATQLATSV---------DGVPFKWLYAVTVDQRTGIVYFTDVS 146 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETT-TEEEEECT---TCEECEEEESEE---------TTEECSCEEEEEECTTTCCEEEEESC
T ss_pred CCCceEEEcCCCCcEEEEECC-CCEEEEeC---CCCEEEEecccC---------CCCcccccceEEEecCCCEEEEECCc
Confidence 479999996447999999986 45888853 345555554220 113577899999999 9999999975
Q ss_pred C-----------------CEEEEEeCCc-c-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEE
Q 024317 124 N-----------------HVIRKITNLG-V-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIR 184 (269)
Q Consensus 124 n-----------------~~I~~~~~~g-~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~ 184 (269)
+ ++|.++++++ . ..+.. .+..|+||++++++..|||+|..+++|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~----------------~~~~p~gia~~~dg~~lyv~d~~~~~I~ 210 (322)
T 2fp8_A 147 TLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK----------------ELHVPGGAEVSADSSFVLVAEFLSHQIV 210 (322)
T ss_dssp SSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE----------------EESCCCEEEECTTSSEEEEEEGGGTEEE
T ss_pred ccccccccceehcccCCCceEEEEeCCCCEEEEecc----------------CCccCcceEECCCCCEEEEEeCCCCeEE
Confidence 3 6899999864 4 33332 2678999999998567999999999999
Q ss_pred EEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCC
Q 024317 185 QINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHT 235 (269)
Q Consensus 185 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~ 235 (269)
+|+.++... +....+. . +..|.||++|++|+|||++..
T Consensus 211 ~~~~~~~~~----------~~~~~~~-~--~~gP~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 211 KYWLEGPKK----------GTAEVLV-K--IPNPGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EEESSSTTT----------TCEEEEE-E--CSSEEEEEECTTSCEEEEEEE
T ss_pred EEECCCCcC----------CccceEE-e--CCCCCCeEECCCCCEEEEecC
Confidence 999876321 1100101 1 122999999999999999954
No 33
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.68 E-value=1.4e-16 Score=155.16 Aligned_cols=155 Identities=17% Similarity=0.052 Sum_probs=116.6
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVa 120 (269)
.+..|.|||++..+++|||+|..+++|.++++ +|. ..+++. ..+..|.+|++|+ .|.||++
T Consensus 451 ~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~----dg~~~~~l~~-------------~~~~~P~giavDp~~g~ly~t 513 (699)
T 1n7d_A 451 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT----KGVKRKTLFR-------------EQGSKPRAIVVDPVHGFMYWT 513 (699)
T ss_dssp CC--CCCEECCCSSSBCEECCTTTSCEEEEBS----SSCCEEEECC-------------CSSCCCCCEECCSSSSCCEEC
T ss_pred CCCCcceEEEEeeCCcEEEEeccCCeEEEEec----CCCceEEEEe-------------CCCCCcceEEEccCCCcEEEc
Confidence 35679999997678999999999999999964 444 333321 2367899999998 6789999
Q ss_pred eCCC-CEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecc
Q 024317 121 DKSN-HVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQ 198 (269)
Q Consensus 121 D~~n-~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~ 198 (269)
|.++ ++|.+++.+|. ...... ..+..|+|||++++++.|||+|..+++|++++.++.....+..
T Consensus 514 d~~~~~~I~~~~~dG~~~~~l~~--------------~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~ 579 (699)
T 1n7d_A 514 DWGTPAKIKKGGLNGVDIYSLVT--------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 579 (699)
T ss_dssp CCSSSCCEEBCCSSSCCCCEESC--------------SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECC
T ss_pred ccCCCCeEEEEeCCCCCeeEEEe--------------CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEe
Confidence 9876 89999999887 333221 1278899999999889999999999999999998865444332
Q ss_pred cCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCcccc
Q 024317 199 SGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDPP 241 (269)
Q Consensus 199 ~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~~ 241 (269)
. . ..+..|.||+++. ++||++|. .+++...
T Consensus 580 ~----~--------~~~~~P~glavd~-~~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 580 D----E--------KRLAHPFSLAVFE-DKVFWTDIINEAIFSA 610 (699)
T ss_dssp C----S--------SSCSSCCCCEEET-TEEEEECSTTTCEEEE
T ss_pred c----C--------CcCCCceEeEEEC-CEEEEEeCCCCeEEEE
Confidence 1 0 1346799999996 48999994 4566543
No 34
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=2.6e-15 Score=127.47 Aligned_cols=153 Identities=16% Similarity=0.219 Sum_probs=113.5
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
.+..|.+|+++ .+|++||++. +++|+++|. ++....... ...+..|.+|+++++|+|||+|.
T Consensus 65 ~~~~p~~i~~~-~~g~l~v~~~-~~~i~~~d~----~~~~~~~~~------------~~~~~~p~~i~~~~~g~l~v~~~ 126 (270)
T 1rwi_B 65 GLYQPQGLAVD-GAGTVYVTDF-NNRVVTLAA----GSNNQTVLP------------FDGLNYPEGLAVDTQGAVYVADR 126 (270)
T ss_dssp SCCSCCCEEEC-TTCCEEEEET-TTEEEEECT----TCSCCEECC------------CCSCSSEEEEEECTTCCEEEEEG
T ss_pred CcCCcceeEEC-CCCCEEEEcC-CCEEEEEeC----CCceEeeee------------cCCcCCCcceEECCCCCEEEEEC
Confidence 34689999996 4788999999 889999953 443222211 12356899999999999999999
Q ss_pred CCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCc
Q 024317 123 SNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGS 201 (269)
Q Consensus 123 ~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~ 201 (269)
.+++|.+++.... ...... ..+..|++|+++++ ++|||++..+++|++++.++.........
T Consensus 127 ~~~~i~~~~~~~~~~~~~~~--------------~~~~~p~~i~~~~~-g~l~v~~~~~~~i~~~~~~~~~~~~~~~~-- 189 (270)
T 1rwi_B 127 GNNRVVKLAAGSKTQTVLPF--------------TGLNDPDGVAVDNS-GNVYVTDTDNNRVVKLEAESNNQVVLPFT-- 189 (270)
T ss_dssp GGTEEEEECTTCCSCEECCC--------------CSCCSCCCEEECTT-CCEEEEEGGGTEEEEECTTTCCEEECCCS--
T ss_pred CCCEEEEEECCCceeEeecc--------------ccCCCceeEEEeCC-CCEEEEECCCCEEEEEecCCCceEeeccc--
Confidence 9999999975444 332211 12568999999987 78999999999999999888765432211
Q ss_pred cCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCccccc
Q 024317 202 ALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDPPL 242 (269)
Q Consensus 202 ~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~~~ 242 (269)
.+..|.+|++|++|++||++. .+++....
T Consensus 190 ------------~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 190 ------------DITAPWGIAVDEAGTVYVTEHNTNQVVKLL 219 (270)
T ss_dssp ------------SCCSEEEEEECTTCCEEEEETTTSCEEEEC
T ss_pred ------------CCCCceEEEECCCCCEEEEECCCCcEEEEc
Confidence 236699999999999999995 45555443
No 35
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.65 E-value=2.9e-14 Score=122.08 Aligned_cols=153 Identities=11% Similarity=0.092 Sum_probs=118.0
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~ 123 (269)
...|.+++++ .++++||++..+++|++++ .+|++..+.-. .....|.+|++|++|+|||++..
T Consensus 103 ~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~----~~g~~~~~~~~------------~~~~~~~~i~~d~~g~l~v~~~~ 165 (300)
T 2qc5_A 103 DSGPYGITEG-LNGDIWFTQLNGDRIGKLT----ADGTIYEYDLP------------NKGSYPAFITLGSDNALWFTENQ 165 (300)
T ss_dssp TCCEEEEEEC-STTCEEEEETTTTEEEEEC----TTSCEEEEECS------------STTCCEEEEEECTTSSEEEEETT
T ss_pred CCCCccceEC-CCCCEEEEccCCCeEEEEC----CCCCEEEccCC------------CCCCCceeEEECCCCCEEEEecC
Confidence 4679999996 5899999999899999995 45777655311 13458999999999999999999
Q ss_pred CCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 124 NHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 124 n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
+++|.++++++. ..+... ..+..|.+|+++++ ++|||++..+++|.+++..+.........
T Consensus 166 ~~~i~~~~~~g~~~~~~~~--------------~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~--- 227 (300)
T 2qc5_A 166 NNSIGRITNTGKLEEYPLP--------------TNAAAPVGITSGND-GALWFVEIMGNKIGRITTTGEISEYDIPT--- 227 (300)
T ss_dssp TTEEEEECTTCCEEEEECS--------------STTCCEEEEEECTT-SSEEEEETTTTEEEEECTTCCEEEEECSS---
T ss_pred CCeEEEECCCCcEEEeeCC--------------CCCCCcceEEECCC-CCEEEEccCCCEEEEEcCCCcEEEEECCC---
Confidence 999999999877 444321 12568999999986 89999999999999999866554432111
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEEcCC-CCccccc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHT-GRLDPPL 242 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~-g~~~~~~ 242 (269)
....|.+|++|++|++||++.. +++....
T Consensus 228 -----------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 228 -----------PNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp -----------TTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred -----------CCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 2356999999999999999953 5655443
No 36
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.65 E-value=1.7e-16 Score=154.49 Aligned_cols=157 Identities=15% Similarity=0.115 Sum_probs=114.5
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEc-CCCCEEEEe
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVD-MKGNIYVAD 121 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd-~~G~lyVaD 121 (269)
.+..|.+|++++.++.||++|..+++|+++++. +.. .+... .......+..|.+|++| ..++|||+|
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~----g~~---~~~~~-----~~~i~~~~~~P~glavD~~~g~LY~tD 471 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLD----RAH---GVSSY-----DTVISRDIQAPDGLAVDWIHSNIYWTD 471 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECCTTTTSBEEEESC----CCC---C-CCC-----CCBCCSCC--CCCEECCCSSSBCEECC
T ss_pred cCcceEEEccccccCeEEEEecCCCeEEEEecC----CCC---CCcce-----EEEEeCCCCCcceEEEEeeCCcEEEEe
Confidence 467899999987789999999999999999753 210 00000 00112346789999999 478899999
Q ss_pred CCCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC-CeEEEEECCCCeEEEeccc
Q 024317 122 KSNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN-QLIRQINLKPEDCSKSSQS 199 (269)
Q Consensus 122 ~~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n-~~I~~~~~~~~~~~~~~~~ 199 (269)
..+++|.+++.+|. ...... ..+..|++|++++.++.||++|.++ ++|+++++++.....+...
T Consensus 472 ~~~~~I~v~d~dg~~~~~l~~--------------~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~ 537 (699)
T 1n7d_A 472 SVLGTVSVADTKGVKRKTLFR--------------EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 537 (699)
T ss_dssp TTTSCEEEEBSSSCCEEEECC--------------CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS
T ss_pred ccCCeEEEEecCCCceEEEEe--------------CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC
Confidence 99999999999987 333221 1267899999999879999999876 8999999887644332211
Q ss_pred CccCCCcccceeeeeccceeeEEEecC-CcEEEEcC-CCCcc
Q 024317 200 GSALGAVSVWVLVSVLSCLVSLVIGFV-ARPYIIRH-TGRLD 239 (269)
Q Consensus 200 g~~~g~~~~~~~~~~l~~p~gia~d~~-g~lyVad~-~g~~~ 239 (269)
.+..|.|||+|++ ++||++|. .++|.
T Consensus 538 --------------~l~~PnGlavd~~~~~LY~aD~~~~~I~ 565 (699)
T 1n7d_A 538 --------------NIQWPNGITLDLLSGRLYWVDSKLHSIS 565 (699)
T ss_dssp --------------SCSSCCCEEECTTTCCEEEEETTTTEEE
T ss_pred --------------CCCCccEEEEeccCCEEEEEecCCCeEE
Confidence 3467999999975 69999994 44444
No 37
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.65 E-value=2e-14 Score=123.08 Aligned_cols=150 Identities=9% Similarity=0.090 Sum_probs=116.1
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
....|.+++++ .++++||++..+++|++++ .++++..+... ..+..|.+|++|++|+|||++.
T Consensus 144 ~~~~~~~i~~d-~~g~l~v~~~~~~~i~~~~----~~g~~~~~~~~------------~~~~~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 144 KGSYPAFITLG-SDNALWFTENQNNSIGRIT----NTGKLEEYPLP------------TNAAAPVGITSGNDGALWFVEI 206 (300)
T ss_dssp TTCCEEEEEEC-TTSSEEEEETTTTEEEEEC----TTCCEEEEECS------------STTCCEEEEEECTTSSEEEEET
T ss_pred CCCCceeEEEC-CCCCEEEEecCCCeEEEEC----CCCcEEEeeCC------------CCCCCcceEEECCCCCEEEEcc
Confidence 35689999996 5788999999999999995 46776654311 2356899999999999999999
Q ss_pred CCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCc
Q 024317 123 SNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGS 201 (269)
Q Consensus 123 ~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~ 201 (269)
.+++|.+++++|. ..+... ..+..|.+|+++++ |+|||++..+++|.++++.+.........
T Consensus 207 ~~~~i~~~~~~g~~~~~~~~--------------~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~-- 269 (300)
T 2qc5_A 207 MGNKIGRITTTGEISEYDIP--------------TPNARPHAITAGKN-SEIWFTEWGANQIGRITNDNTIQEYQLQT-- 269 (300)
T ss_dssp TTTEEEEECTTCCEEEEECS--------------STTCCEEEEEECST-TCEEEEETTTTEEEEECTTSCEEEEECCS--
T ss_pred CCCEEEEEcCCCcEEEEECC--------------CCCCCceEEEECCC-CCEEEeccCCCeEEEECCCCcEEEEECCc--
Confidence 9999999999877 444221 12568999999987 88999999989999999966544321111
Q ss_pred cCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCcc
Q 024317 202 ALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRLD 239 (269)
Q Consensus 202 ~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~~ 239 (269)
....|.+|++|++|++||++.+ ++.
T Consensus 270 ------------~~~~~~~i~~~~~g~l~v~~~~-~i~ 294 (300)
T 2qc5_A 270 ------------ENAEPHGITFGKDGSVWFALKC-KIG 294 (300)
T ss_dssp ------------TTCCCCCEEECTTSCEEEECSS-EEE
T ss_pred ------------cCCccceeEeCCCCCEEEEccC-ceE
Confidence 1255899999999999999973 443
No 38
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.60 E-value=1.5e-13 Score=117.51 Aligned_cols=154 Identities=11% Similarity=0.098 Sum_probs=116.9
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
....|.+|+++ .++++||++..++.|+++| .++++..+... .....|.+|++|++|++||++.
T Consensus 97 ~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~d----~~g~~~~~~~~------------~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 97 PDSAPYGITEG-PNGDIWFTEMNGNRIGRIT----DDGKIREYELP------------NKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp TTCCEEEEEEC-TTSCEEEEETTTTEEEEEC----TTCCEEEEECS------------STTCCEEEEEECTTSCEEEEET
T ss_pred cCCCceeeEEC-CCCCEEEEecCCceEEEEC----CCCCEEEecCC------------CCCCCCceEEEcCCCCEEEEeC
Confidence 34579999996 5799999999899999995 46766655321 1245899999999999999999
Q ss_pred CCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCc
Q 024317 123 SNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGS 201 (269)
Q Consensus 123 ~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~ 201 (269)
.++.|.+++++|. ..+... ..+..|.+|+++++ ++|||++..+++|++++..+.... ....
T Consensus 160 ~~~~i~~~~~~g~~~~~~~~--------------~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-- 221 (299)
T 2z2n_A 160 QNNAIGRITESGDITEFKIP--------------TPASGPVGITKGND-DALWFVEIIGNKIGRITTSGEITE-FKIP-- 221 (299)
T ss_dssp TTTEEEEECTTCCEEEEECS--------------STTCCEEEEEECTT-SSEEEEETTTTEEEEECTTCCEEE-EECS--
T ss_pred CCCEEEEEcCCCcEEEeeCC--------------CCCCcceeEEECCC-CCEEEEccCCceEEEECCCCcEEE-EECC--
Confidence 8899999999776 443221 12567999999987 889999998899999999555332 2111
Q ss_pred cCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCccccc
Q 024317 202 ALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDPPL 242 (269)
Q Consensus 202 ~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~~~ 242 (269)
. ....|.+|++|++|++||++. .+++...+
T Consensus 222 --~---------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 222 --T---------PNARPHAITAGAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp --S---------TTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred --C---------CCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence 0 225699999999999999984 45555444
No 39
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.59 E-value=2.8e-13 Score=117.03 Aligned_cols=153 Identities=12% Similarity=0.097 Sum_probs=113.5
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC-
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK- 122 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~- 122 (269)
...|.+|+++ .+|++||++...++|+++|. .+|++..+.... ....++.|+++++|++|++||+|.
T Consensus 68 ~~~~~~l~~~-~dg~l~v~~~~~~~i~~~d~---~~g~~~~~~~~~---------~~~~~~~~~~i~~d~~G~l~vtd~~ 134 (296)
T 3e5z_A 68 SHHQNGHCLN-KQGHLIACSHGLRRLERQRE---PGGEWESIADSF---------EGKKLNSPNDVCLAPDGSLWFSDPT 134 (296)
T ss_dssp CSSEEEEEEC-TTCCEEEEETTTTEEEEECS---TTCCEEEEECEE---------TTEECCCCCCEEECTTSCEEEEECS
T ss_pred CCCcceeeEC-CCCcEEEEecCCCeEEEEcC---CCCcEEEEeecc---------CCCCCCCCCCEEECCCCCEEEECCc
Confidence 3469999996 58899999999999999963 377777664220 113467899999999999999985
Q ss_pred ----------------CCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEE
Q 024317 123 ----------------SNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQ 185 (269)
Q Consensus 123 ----------------~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~ 185 (269)
..++|.+++++|. ..+... +..|++|+++++ +.++|+|..+++|++
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~----------------~~~~~gi~~s~d-g~~lv~~~~~~~i~~ 197 (296)
T 3e5z_A 135 YGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRD----------------RVKPNGLAFLPS-GNLLVSDTGDNATHR 197 (296)
T ss_dssp HHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECC----------------CSSEEEEEECTT-SCEEEEETTTTEEEE
T ss_pred cccccccccccccccCCCcEEEEECCCCCEEEeecC----------------CCCCccEEECCC-CCEEEEeCCCCeEEE
Confidence 2469999998877 554332 567999999998 554599999999999
Q ss_pred EECC--CCe---EEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCccccc
Q 024317 186 INLK--PED---CSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRLDPPL 242 (269)
Q Consensus 186 ~~~~--~~~---~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~~~~~ 242 (269)
++.+ +.. ...+ .. ....|.+|++|++|++||++ .+++....
T Consensus 198 ~~~~~~g~~~~~~~~~-~~--------------~~~~p~~i~~d~~G~l~v~~-~~~v~~~~ 243 (296)
T 3e5z_A 198 YCLNARGETEYQGVHF-TV--------------EPGKTDGLRVDAGGLIWASA-GDGVHVLT 243 (296)
T ss_dssp EEECSSSCEEEEEEEE-CC--------------SSSCCCSEEEBTTSCEEEEE-TTEEEEEC
T ss_pred EEECCCCcCcCCCeEe-eC--------------CCCCCCeEEECCCCCEEEEc-CCeEEEEC
Confidence 9975 222 1111 11 12568999999999999999 55555433
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.58 E-value=2.8e-13 Score=115.88 Aligned_cols=150 Identities=9% Similarity=0.044 Sum_probs=114.4
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~ 123 (269)
...|.+++++ .+|++||++..++.|+++| .+|++..+... ..+..|.+|++|++|+|||++..
T Consensus 140 ~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~----~~g~~~~~~~~------------~~~~~~~~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 140 GSYPSFITLG-SDNALWFTENQNNAIGRIT----ESGDITEFKIP------------TPASGPVGITKGNDDALWFVEII 202 (299)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEEC----TTCCEEEEECS------------STTCCEEEEEECTTSSEEEEETT
T ss_pred CCCCceEEEc-CCCCEEEEeCCCCEEEEEc----CCCcEEEeeCC------------CCCCcceeEEECCCCCEEEEccC
Confidence 4579999996 5789999999999999995 46777665311 13568999999999999999998
Q ss_pred CCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 124 NHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 124 n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
.++|.++++++. ..+... .....|.+|+++++ |+|||++..+++|.++++++... .....
T Consensus 203 ~~~i~~~~~~g~~~~~~~~--------------~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~~g~~~-~~~~~--- 263 (299)
T 2z2n_A 203 GNKIGRITTSGEITEFKIP--------------TPNARPHAITAGAG-IDLWFTEWGANKIGRLTSNNIIE-EYPIQ--- 263 (299)
T ss_dssp TTEEEEECTTCCEEEEECS--------------STTCCEEEEEECST-TCEEEEETTTTEEEEEETTTEEE-EEECS---
T ss_pred CceEEEECCCCcEEEEECC--------------CCCCCceeEEECCC-CCEEEeccCCceEEEECCCCceE-EEeCC---
Confidence 999999999776 443221 12567999999987 88999999889999999865332 22111
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEEcCCCCccc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRLDP 240 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~~~ 240 (269)
. ....|.++++ ++|++|+++..+.+..
T Consensus 264 -~---------~~~~~~~i~~-~~g~l~v~~~~~~l~~ 290 (299)
T 2z2n_A 264 -I---------KSAEPHGICF-DGETIWFAMECDKIGK 290 (299)
T ss_dssp -S---------SSCCEEEEEE-CSSCEEEEETTTEEEE
T ss_pred -C---------CCCccceEEe-cCCCEEEEecCCcEEE
Confidence 0 1255899999 8999999986665543
No 41
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.58 E-value=4.1e-14 Score=126.82 Aligned_cols=177 Identities=13% Similarity=0.141 Sum_probs=115.7
Q ss_pred CCcEEEEEecCccCCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceE
Q 024317 30 DGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSF 109 (269)
Q Consensus 30 ~g~~~~~~~~g~~~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~gi 109 (269)
+...++.+..+ +..|.+|++++ +|++||++.. ++|++++ +|+...+.... - .......|.||
T Consensus 19 ~~~~~~~va~~---l~~P~~ia~~p-dG~l~V~e~~-g~I~~i~-----~g~~~~~~~~~--v------~~~g~~~p~gi 80 (352)
T 2ism_A 19 QGLRVEEVVGG---LEVPWALAFLP-DGGMLIAERP-GRIRLFR-----EGRLSTYAELS--V------YHRGESGLLGL 80 (352)
T ss_dssp -CCCEEEEECC---CSCEEEEEECT-TSCEEEEETT-TEEEEEE-----TTEEEEEEECC--C------CCSTTCSEEEE
T ss_pred CCcEEEEEECC---CCCceEEEEcC-CCeEEEEeCC-CeEEEEE-----CCCccEeecce--E------eecCCCCceeE
Confidence 34567777653 67999999964 7899999986 8999994 55555444221 0 11235689999
Q ss_pred EEcCC----CCEEEEeCCC-----CEEEEEeCCc----c-eEEe-cCCCCCCCCCCCccccccccCceEEEEeCCCCEEE
Q 024317 110 AVDMK----GNIYVADKSN-----HVIRKITNLG----V-TTIA-GGGSKKEGRADGPAQNASFSNDFELTFVPHICALL 174 (269)
Q Consensus 110 avd~~----G~lyVaD~~n-----~~I~~~~~~g----~-~~~~-g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~Ly 174 (269)
+++++ +.|||++..+ ++|.+++.++ . ..+. +.... ......|.+|+++++ |.||
T Consensus 81 a~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~----------~~~~h~~~~l~~~pd-G~Ly 149 (352)
T 2ism_A 81 ALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPAR----------PHGLHSGGRIAFGPD-GMLY 149 (352)
T ss_dssp EECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCC----------TTCCCCCCCEEECTT-SCEE
T ss_pred EECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCC----------CCCCcCCceEEECCC-CCEE
Confidence 99997 7899999864 7999998654 1 2222 11100 122567899999998 8999
Q ss_pred EEECC-------------CCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEec-CCcEEEEcCCCC
Q 024317 175 ISDHG-------------NQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGF-VARPYIIRHTGR 237 (269)
Q Consensus 175 VaD~~-------------n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~-~g~lyVad~~g~ 237 (269)
|++.. .++|+++++++....-....+........|.. .+..|.||++|+ +|+||++|+...
T Consensus 150 v~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~--G~rnp~g~a~d~~~g~l~v~d~g~~ 224 (352)
T 2ism_A 150 VTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSL--GHRNPQGLAWHPKTGELFSSEHGPS 224 (352)
T ss_dssp EECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEE--CCSEECCCEECTTTCCEEEEEECC-
T ss_pred EEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEE--cCCCcccEEEECCCCCEEEEEcCCC
Confidence 99742 36899999887421000000000012223333 357799999999 789999996433
No 42
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.55 E-value=1.8e-13 Score=119.28 Aligned_cols=150 Identities=14% Similarity=0.150 Sum_probs=110.7
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC-
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK- 122 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~- 122 (269)
...|.+++++ .+|++|+++...++|.+++ .+|++..+.... ....++.|++++++++|+|||+|.
T Consensus 85 ~~~~~gl~~d-~dG~l~v~~~~~~~v~~~~----~~g~~~~~~~~~---------~~~~~~~~~~i~~d~dG~l~~td~~ 150 (305)
T 3dr2_A 85 TAFTNGNAVD-AQQRLVHCEHGRRAITRSD----ADGQAHLLVGRY---------AGKRLNSPNDLIVARDGAIWFTDPP 150 (305)
T ss_dssp CSCEEEEEEC-TTSCEEEEETTTTEEEEEC----TTSCEEEEECEE---------TTEECSCCCCEEECTTSCEEEECCS
T ss_pred CCccceeeEC-CCCCEEEEECCCCEEEEEC----CCCCEEEEEecc---------CCCccCCCCCEEECCCCCEEEeCcC
Confidence 3468999996 5899999999999999995 457777665321 123578999999999999999984
Q ss_pred ----------------CCCEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC----
Q 024317 123 ----------------SNHVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN---- 180 (269)
Q Consensus 123 ----------------~n~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n---- 180 (269)
..+.|.+++++ |. ..+. . +..|+++++++++..|||+|..+
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~----------------~~~p~gl~~spdg~~lyv~~~~~~~~~ 213 (305)
T 3dr2_A 151 FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D----------------LDHPNGLAFSPDEQTLYVSQTPEQGHG 213 (305)
T ss_dssp GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E----------------ESSEEEEEECTTSSEEEEEECCC---C
T ss_pred CCccccccccccccccCCCeEEEEcCCCCcEEEEe-c----------------CCCCcceEEcCCCCEEEEEecCCcCCC
Confidence 13689999984 55 4443 1 56899999999966799999974
Q ss_pred -CeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCC
Q 024317 181 -QLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHT 235 (269)
Q Consensus 181 -~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~ 235 (269)
++|++++.++..+...... .. .....|.||++|++|+|||+...
T Consensus 214 ~~~i~~~~~~~~~l~~~~~~--~~---------~~~~~pdgi~~d~~G~lwv~~~~ 258 (305)
T 3dr2_A 214 SVEITAFAWRDGALHDRRHF--AS---------VPDGLPDGFCVDRGGWLWSSSGT 258 (305)
T ss_dssp CCEEEEEEEETTEEEEEEEE--EC---------CSSSCCCSEEECTTSCEEECCSS
T ss_pred CCEEEEEEecCCCccCCeEE--EE---------CCCCCCCeEEECCCCCEEEecCC
Confidence 7999998776542111000 00 01245899999999999999844
No 43
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.55 E-value=5.5e-13 Score=116.55 Aligned_cols=161 Identities=12% Similarity=0.045 Sum_probs=111.7
Q ss_pred CCcceEEEecCCCeEEEEeCCC--CEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSR--SAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~--~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
..|.+|+++ .+|++||+|..+ .+|++++ ..+|++..+.... ....|.++++...+.+||+|.
T Consensus 72 ~~p~gia~~-~dG~l~vad~~~~~~~v~~~d---~~~g~~~~~~~~~------------~~~~~~g~~~~~~~~~~v~d~ 135 (306)
T 2p4o_A 72 GKVSGLAFT-SNGDLVATGWNADSIPVVSLV---KSDGTVETLLTLP------------DAIFLNGITPLSDTQYLTADS 135 (306)
T ss_dssp SEEEEEEEC-TTSCEEEEEECTTSCEEEEEE---CTTSCEEEEEECT------------TCSCEEEEEESSSSEEEEEET
T ss_pred CCceeEEEc-CCCcEEEEeccCCcceEEEEc---CCCCeEEEEEeCC------------CccccCcccccCCCcEEEEEC
Confidence 369999996 478899999764 3588886 3678877665321 134688999888888999999
Q ss_pred CCCEEEEEeCCcc--eEE--ecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecc
Q 024317 123 SNHVIRKITNLGV--TTI--AGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQ 198 (269)
Q Consensus 123 ~n~~I~~~~~~g~--~~~--~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~ 198 (269)
.+++|+++++++. ..+ .+..... .....+..|+|| +++++.|||+|+.+++|++|+.++...
T Consensus 136 ~~g~i~~~d~~~~~~~v~~~~~~~~~~-------~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~----- 201 (306)
T 2p4o_A 136 YRGAIWLIDVVQPSGSIWLEHPMLARS-------NSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDK----- 201 (306)
T ss_dssp TTTEEEEEETTTTEEEEEEECGGGSCS-------STTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSC-----
T ss_pred CCCeEEEEeCCCCcEeEEEECCccccc-------cccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCC-----
Confidence 8999999998642 222 2211000 011347789999 566579999999999999999875210
Q ss_pred cCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCccccc
Q 024317 199 SGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDPPL 242 (269)
Q Consensus 199 ~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~~~ 242 (269)
. +....+. .+..|.||++|++|++||++. .+++....
T Consensus 202 ~----~~~~~~~---~~~~P~gi~vd~dG~l~va~~~~~~V~~~~ 239 (306)
T 2p4o_A 202 P----GEPEIFV---EQTNIDDFAFDVEGNLYGATHIYNSVVRIA 239 (306)
T ss_dssp B----CCCEEEE---ESCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred C----CccEEEe---ccCCCCCeEECCCCCEEEEeCCCCeEEEEC
Confidence 0 1111111 235799999999999999994 45555444
No 44
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.54 E-value=1.7e-13 Score=120.48 Aligned_cols=150 Identities=11% Similarity=-0.034 Sum_probs=109.7
Q ss_pred CCCCcceEEEecCCCeEEEEeCCC-----------------CEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCC
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSR-----------------SAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDK 105 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~-----------------~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~ 105 (269)
.+..|.+|++++.+|+|||+|..+ ++|+++|. .++++..+. ..+..
T Consensus 124 ~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---~~~~~~~~~--------------~~~~~ 186 (322)
T 2fp8_A 124 PFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---STKETTLLL--------------KELHV 186 (322)
T ss_dssp ECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET---TTTEEEEEE--------------EEESC
T ss_pred cccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC---CCCEEEEec--------------cCCcc
Confidence 456899999963278999999753 67888863 345555443 23678
Q ss_pred CceEEEcCCCC-EEEEeCCCCEEEEEeCCcc-----eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC
Q 024317 106 PKSFAVDMKGN-IYVADKSNHVIRKITNLGV-----TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG 179 (269)
Q Consensus 106 P~giavd~~G~-lyVaD~~n~~I~~~~~~g~-----~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~ 179 (269)
|++|+++++|+ |||+|..+++|++++.++. ..+.. +..|.+|+++++ |+|||++..
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-----------------~~gP~gi~~d~~-G~l~va~~~ 248 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-----------------IPNPGNIKRNAD-GHFWVSSSE 248 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-----------------CSSEEEEEECTT-SCEEEEEEE
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-----------------CCCCCCeEECCC-CCEEEEecC
Confidence 99999999987 9999999999999997752 22221 112999999997 899999976
Q ss_pred ----------CCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCcc
Q 024317 180 ----------NQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLD 239 (269)
Q Consensus 180 ----------n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~ 239 (269)
+++|.+|++++..+..+..+. +. .+..|.+++.+ +|+|||++. .+++.
T Consensus 249 ~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~---g~--------~~~~~~~~~~~-~g~L~v~~~~~~~i~ 307 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDEFGNILEVIPLPP---PF--------AGEHFEQIQEH-DGLLYIGTLFHGSVG 307 (322)
T ss_dssp ETTSSTTSCEEEEEEEECTTSCEEEEEECCT---TT--------TTSCCCEEEEE-TTEEEEECSSCSEEE
T ss_pred cccccccCCCccEEEEECCCCCEEEEEECCC---CC--------ccccceEEEEe-CCEEEEeecCCCceE
Confidence 578999999988776654331 11 13567788775 789999984 34443
No 45
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.54 E-value=5.4e-13 Score=119.69 Aligned_cols=177 Identities=14% Similarity=0.077 Sum_probs=117.7
Q ss_pred ccceecCCCcEEEEEecCccCCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCccccc
Q 024317 23 SSGLLLEDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSAR 102 (269)
Q Consensus 23 ~~~~~~~~g~~~~~~~~g~~~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~ 102 (269)
.++...+.++.++.+..+ +..|.+|++++ +|+|||++.. ++|+++ +.+|+ ..+..... + ...
T Consensus 10 ~~~~~~~~~~~~~~va~~---l~~P~~ia~~p-dG~l~V~e~~-g~I~~~----d~~G~-~~~~~~~v--~------~~g 71 (354)
T 3a9g_A 10 RKGPSEEWKFKISEVASD---LEVPWSIAPLG-GGRYLVTERP-GRLVLI----SPSGK-KLVASFDV--A------NVG 71 (354)
T ss_dssp ------CCCEEEEEEECS---CSCEEEEEEEE-TTEEEEEETT-TEEEEE----CSSCE-EEEEECCC--C------CST
T ss_pred hcCCCCCCCeEEEEEeCC---CCCCeEEEEcC-CCeEEEEeCC-CEEEEE----eCCCc-eEeeccce--e------ecC
Confidence 334555678888888753 67999999975 7899999987 999999 45676 44432210 0 112
Q ss_pred CCCCceEEEcCC----CCEEEEeCC---C----CEEEEEeCCcc-------eEE-ecCCCCCCCCCCCccccccccCceE
Q 024317 103 FDKPKSFAVDMK----GNIYVADKS---N----HVIRKITNLGV-------TTI-AGGGSKKEGRADGPAQNASFSNDFE 163 (269)
Q Consensus 103 ~~~P~giavd~~----G~lyVaD~~---n----~~I~~~~~~g~-------~~~-~g~~~~~~~~~~~~~~~~~l~~P~g 163 (269)
...|.||+++++ |.|||++.. + ++|.+++.++. ..+ .+.. ......|++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~------------~~~~h~~~~ 139 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP------------GAYIHNGGR 139 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE------------CCSSCCCCC
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC------------CCCCcCCce
Confidence 457999999986 889999974 3 78999986542 112 1111 012567899
Q ss_pred EEEeCCCCEEEEEECC-------------CCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEec-CCcE
Q 024317 164 LTFVPHICALLISDHG-------------NQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGF-VARP 229 (269)
Q Consensus 164 ia~~~~~g~LyVaD~~-------------n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~-~g~l 229 (269)
|+++++ |.|||++.. .++|+++++++..- .. .+......|.. .+..|.||++|+ +|+|
T Consensus 140 l~~~pD-G~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p----~~-npf~~~~i~a~--G~rnp~Gla~d~~~g~l 211 (354)
T 3a9g_A 140 IRFGPD-GMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP----AD-NPFPNSPIWSY--GHRNPQGIDWHRASGVM 211 (354)
T ss_dssp EEECTT-SCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC----TT-SSSTTCCEEEE--CCSCCCEEEECTTTCCE
T ss_pred EEECCC-CcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC----CC-CCCCCCcEEEE--ccCCcceEEEeCCCCCE
Confidence 999998 899999642 36899999887521 00 01111223332 357799999999 8999
Q ss_pred EEEcCCCC
Q 024317 230 YIIRHTGR 237 (269)
Q Consensus 230 yVad~~g~ 237 (269)
|++|+...
T Consensus 212 ~v~d~g~~ 219 (354)
T 3a9g_A 212 VATEHGPV 219 (354)
T ss_dssp EEEECCSS
T ss_pred EEEecCCC
Confidence 99997544
No 46
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.54 E-value=7.1e-13 Score=114.45 Aligned_cols=166 Identities=10% Similarity=0.063 Sum_probs=119.5
Q ss_pred ecCCCcEEEEEecCccCCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCC
Q 024317 27 LLEDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKP 106 (269)
Q Consensus 27 ~~~~g~~~~~~~~g~~~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P 106 (269)
++..+..++.+.. .+..|.++++++.++.+|+++..+++|++++. ..+ +..+.. ....|
T Consensus 13 ~~~~~~~~~~l~~---~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~---~~~-~~~~~~--------------~~~~~ 71 (296)
T 3e5z_A 13 LFPAGAEARRLAD---GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSD---DGQ-LSPEMH--------------PSHHQ 71 (296)
T ss_dssp GSCTTCCCEEEEC---CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEET---TSC-EEEEES--------------SCSSE
T ss_pred hcCCCCcEEEEec---CCccccCCeEeCCCCEEEEEeCCCCEEEEEEC---CCC-eEEEEC--------------CCCCc
Confidence 4455666666654 35689999998644459999999999999974 233 554432 12478
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEEEeC-Ccc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEEC------
Q 024317 107 KSFAVDMKGNIYVADKSNHVIRKITN-LGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDH------ 178 (269)
Q Consensus 107 ~giavd~~G~lyVaD~~n~~I~~~~~-~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~------ 178 (269)
.+|+++++|+|||++..+++|.++++ +|. ..+..... ...+..|++|+++++ |+|||+|.
T Consensus 72 ~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~-----------~~~~~~~~~i~~d~~-G~l~vtd~~~g~~~ 139 (296)
T 3e5z_A 72 NGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFE-----------GKKLNSPNDVCLAPD-GSLWFSDPTYGIDK 139 (296)
T ss_dssp EEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEET-----------TEECCCCCCEEECTT-SCEEEEECSHHHHC
T ss_pred ceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccC-----------CCCCCCCCCEEECCC-CCEEEECCcccccc
Confidence 99999999999999998899999998 777 54432210 123678999999997 89999986
Q ss_pred -----------CCCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCcccc
Q 024317 179 -----------GNQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDPP 241 (269)
Q Consensus 179 -----------~n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~~ 241 (269)
..++|++++.++....... .+..|.|++++++|++++++. .++++..
T Consensus 140 ~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~----------------~~~~~~gi~~s~dg~~lv~~~~~~~i~~~ 198 (296)
T 3e5z_A 140 PEEGYGGEMELPGRWVFRLAPDGTLSAPIR----------------DRVKPNGLAFLPSGNLLVSDTGDNATHRY 198 (296)
T ss_dssp GGGSSCCCCCSSSCEEEEECTTSCEEEEEC----------------CCSSEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred ccccccccccCCCcEEEEECCCCCEEEeec----------------CCCCCccEEECCCCCEEEEeCCCCeEEEE
Confidence 2468999988755433221 235689999999998778884 4555543
No 47
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.53 E-value=4.6e-13 Score=116.76 Aligned_cols=156 Identities=12% Similarity=0.089 Sum_probs=114.9
Q ss_pred CcEEEEEecCccCCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEE
Q 024317 31 GYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFA 110 (269)
Q Consensus 31 g~~~~~~~~g~~~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~gia 110 (269)
+..++.+.. .+..++|+++++.++.||++|..+++|++++ .+|.+..+... -..|.+++
T Consensus 34 ~~~~~~l~~---~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~----~~g~~~~~~~~--------------~~~~~gl~ 92 (305)
T 3dr2_A 34 DARLLTLYD---QATWSEGPAWWEAQRTLVWSDLVGRRVLGWR----EDGTVDVLLDA--------------TAFTNGNA 92 (305)
T ss_dssp TCCCEEEEC---CCSSEEEEEEEGGGTEEEEEETTTTEEEEEE----TTSCEEEEEES--------------CSCEEEEE
T ss_pred CCceEEEec---CCcCccCCeEeCCCCEEEEEECCCCEEEEEe----CCCCEEEEeCC--------------CCccceee
Confidence 344555544 3458999999875556999999999999995 46666655422 24689999
Q ss_pred EcCCCCEEEEeCCCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC----------
Q 024317 111 VDMKGNIYVADKSNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG---------- 179 (269)
Q Consensus 111 vd~~G~lyVaD~~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~---------- 179 (269)
+|++|+||+++..+++|.+++++|. ..+..... ...++.|++|+++++ |+||++|..
T Consensus 93 ~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~-----------~~~~~~~~~i~~d~d-G~l~~td~~~g~~~~~~~~ 160 (305)
T 3dr2_A 93 VDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYA-----------GKRLNSPNDLIVARD-GAIWFTDPPFGLRKPSQGC 160 (305)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTSCEEEEECEET-----------TEECSCCCCEEECTT-SCEEEECCSGGGSCGGGSC
T ss_pred ECCCCCEEEEECCCCEEEEECCCCCEEEEEeccC-----------CCccCCCCCEEECCC-CCEEEeCcCCCcccccccc
Confidence 9999999999998899999999887 55543211 123678999999997 899999851
Q ss_pred -------CCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCc-EEEEcCC
Q 024317 180 -------NQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIRHT 235 (269)
Q Consensus 180 -------n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad~~ 235 (269)
.+.|+++++.++...... .+..|.|++++++|+ |||++..
T Consensus 161 ~~~~~~~~~~v~~~d~~~g~~~~~~----------------~~~~p~gl~~spdg~~lyv~~~~ 208 (305)
T 3dr2_A 161 PADPELAHHSVYRLPPDGSPLQRMA----------------DLDHPNGLAFSPDEQTLYVSQTP 208 (305)
T ss_dssp CCCCSSSCEEEEEECSSSCCCEEEE----------------EESSEEEEEECTTSSEEEEEECC
T ss_pred ccccccCCCeEEEEcCCCCcEEEEe----------------cCCCCcceEEcCCCCEEEEEecC
Confidence 357888887543222211 125689999999995 9999964
No 48
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=5.8e-13 Score=115.75 Aligned_cols=154 Identities=12% Similarity=0.038 Sum_probs=110.5
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC--
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK-- 122 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~-- 122 (269)
..|.+++++ .+|++||+. .+.|+++|. .++++..+.... ....++.|+++++|++|++||++.
T Consensus 54 ~~~~~i~~~-~dG~l~v~~--~~~l~~~d~---~~g~~~~~~~~~---------~~~~~~~~~di~~d~dG~l~~~~~~~ 118 (297)
T 3g4e_A 54 APVSSVALR-QSGGYVATI--GTKFCALNW---KEQSAVVLATVD---------NDKKNNRFNDGKVDPAGRYFAGTMAE 118 (297)
T ss_dssp SCEEEEEEB-TTSSEEEEE--TTEEEEEET---TTTEEEEEEECC---------TTCSSEEEEEEEECTTSCEEEEEEEC
T ss_pred CceEEEEEC-CCCCEEEEE--CCeEEEEEC---CCCcEEEEEecC---------CCCCCCCCCCEEECCCCCEEEecCCc
Confidence 468999996 478899997 578999974 467776654321 012356799999999999999984
Q ss_pred ---------CCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC--C
Q 024317 123 ---------SNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK--P 190 (269)
Q Consensus 123 ---------~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~--~ 190 (269)
..++|++++++|. ..+.. .+..|++|++++++..|||+|+.+++|++++.+ .
T Consensus 119 ~~~~~~~~~~~~~l~~~d~~g~~~~~~~----------------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~ 182 (297)
T 3g4e_A 119 ETAPAVLERHQGALYSLFPDHHVKKYFD----------------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQT 182 (297)
T ss_dssp CSBTTBCCTTCEEEEEECTTSCEEEEEE----------------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTT
T ss_pred ccccccccCCCcEEEEEECCCCEEEEee----------------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCC
Confidence 3458999999887 44432 267799999999966899999999999999863 2
Q ss_pred CeEE---EecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCcccc
Q 024317 191 EDCS---KSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDPP 241 (269)
Q Consensus 191 ~~~~---~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~~ 241 (269)
+... .+... . . ....|.|+++|++|+|||++. .+++...
T Consensus 183 G~~~~~~~~~~~--~-~---------~~~~p~g~~~d~~G~lwva~~~~~~v~~~ 225 (297)
T 3g4e_A 183 GQISNRRSVYKL--E-K---------EEQIPDGMCIDAEGKLWVACYNGGRVIRL 225 (297)
T ss_dssp CCEEEEEEEEEC--C-G---------GGCEEEEEEEBTTSCEEEEEETTTEEEEE
T ss_pred CcccCcEEEEEC--C-C---------CCCCCCeeEECCCCCEEEEEcCCCEEEEE
Confidence 2221 11111 0 0 124699999999999999995 4445433
No 49
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.51 E-value=9.7e-13 Score=114.99 Aligned_cols=155 Identities=12% Similarity=0.021 Sum_probs=107.6
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
..|+++++++ +++|||+|..+++|+++| .++.+..+...+ ..|.+|+++++|+|||+|..+
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d----~~g~~~~~~~~~--------------~~p~gia~~~dG~l~vad~~~ 92 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSIT----PDGNQQIHATVE--------------GKVSGLAFTSNGDLVATGWNA 92 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEEC----TTCCEEEEEECS--------------SEEEEEEECTTSCEEEEEECT
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEEC----CCCceEEEEeCC--------------CCceeEEEcCCCcEEEEeccC
Confidence 5799999974 789999999999999994 566666554321 269999999999999999764
Q ss_pred --CEEEEEe-CCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCe--EEEecc
Q 024317 125 --HVIRKIT-NLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPED--CSKSSQ 198 (269)
Q Consensus 125 --~~I~~~~-~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~--~~~~~~ 198 (269)
.+|.+++ ++|. ..++... ....|+|+++.+. +.+||+|..+++|++++..+.. +.....
T Consensus 93 ~~~~v~~~d~~~g~~~~~~~~~--------------~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~ 157 (306)
T 2p4o_A 93 DSIPVVSLVKSDGTVETLLTLP--------------DAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSGSIWLEHP 157 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECT--------------TCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEEEEEEECG
T ss_pred CcceEEEEcCCCCeEEEEEeCC--------------CccccCcccccCC-CcEEEEECCCCeEEEEeCCCCcEeEEEECC
Confidence 3588887 5676 5555431 1345789987664 8999999989999999987642 221111
Q ss_pred cCccCCCcccceeeeeccceeeEEEecCC-cEEEEcC-CCCcccc
Q 024317 199 SGSALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRH-TGRLDPP 241 (269)
Q Consensus 199 ~g~~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~-~g~~~~~ 241 (269)
.. .... .. ..+..|.|| +++| .+||+|. +++++..
T Consensus 158 ~~-~~~~----~~-~~~~~pngi--s~dg~~lyv~d~~~~~I~~~ 194 (306)
T 2p4o_A 158 ML-ARSN----SE-SVFPAANGL--KRFGNFLYVSNTEKMLLLRI 194 (306)
T ss_dssp GG-SCSS----TT-CCSCSEEEE--EEETTEEEEEETTTTEEEEE
T ss_pred cc-cccc----cc-CCCCcCCCc--CcCCCEEEEEeCCCCEEEEE
Confidence 10 0000 00 134679999 4455 8999995 4455433
No 50
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=2.9e-12 Score=113.71 Aligned_cols=170 Identities=11% Similarity=0.089 Sum_probs=111.5
Q ss_pred CCCcceEEEecCCCeEEEEeC---CCCEEEEEecCCCCCccEEEEEcC--Cc-c---cCC-CCCcc-----c----ccCC
Q 024317 44 EINPHSVIDRPGSSDLIVLDS---SRSAFYTLSFPLSEESVVKRLAGD--GV-Q---GYS-DGEPG-----S----ARFD 104 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~---~~~~I~~~dl~~~~~g~~~~~~g~--g~-~---g~~-dg~~~-----~----~~~~ 104 (269)
...|.+|++++.++.+||+|. .++.|+++|+ .+|+...+... .. + .+. +|... . ....
T Consensus 119 ~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~---~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 195 (343)
T 2qe8_A 119 NSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDL---QTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHL 195 (343)
T ss_dssp TCCCCEEEEETTTTEEEEEECCSGGGCEEEEEET---TTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCC
T ss_pred ccccceEEEecCCCEEEEEcCccCCCCeEEEEEC---CCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceec
Confidence 357899999766789999999 8899999985 35666655422 00 0 000 11100 0 0124
Q ss_pred CCceEEEcCCCC-EEEEeCCCCEEEEEeCCcc-e-EEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC
Q 024317 105 KPKSFAVDMKGN-IYVADKSNHVIRKITNLGV-T-TIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ 181 (269)
Q Consensus 105 ~P~giavd~~G~-lyVaD~~n~~I~~~~~~g~-~-~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~ 181 (269)
.|+||+++++|. ||+++...+++++++.+-. . .+....... ..........|.||++|++ |+|||+|..++
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~g~~g~pdgia~d~~-G~l~va~~~~~ 269 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS-----KIERYSEKPICDGISIDKD-HNIYVGDLAHS 269 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT-----TCEEEEECCSCSCEEECTT-CCEEEEEGGGT
T ss_pred ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc-----ceEecccCCCCceEEECCC-CCEEEEccCCC
Confidence 689999999996 9999998889999974210 0 000000000 0000011236999999997 89999999999
Q ss_pred eEEEEEC-CCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCC
Q 024317 182 LIRQINL-KPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTG 236 (269)
Q Consensus 182 ~I~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g 236 (269)
+|.+|++ ++........+ .+..|.+++++++|++||++...
T Consensus 270 ~V~~~d~~~G~~~~~~~~~--------------~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 270 AIGVITSADRAYKLLVTDE--------------KLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEEEEETTTTEEEEEEECG--------------GGSCEEEEEECTTSCEEEEECCG
T ss_pred eEEEEECCCCCEEEEEECC--------------ceecCCeeEECCCCcEEEEeCcc
Confidence 9999999 66543332211 24679999999999999999643
No 51
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.50 E-value=4.8e-13 Score=119.93 Aligned_cols=150 Identities=11% Similarity=0.075 Sum_probs=104.2
Q ss_pred CcceEEEecC-CC--eEEEEeCC--CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEE
Q 024317 46 NPHSVIDRPG-SS--DLIVLDSS--RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVA 120 (269)
Q Consensus 46 ~P~giav~~~-~g--~lyV~D~~--~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVa 120 (269)
+|+||.+.++ ++ +|||++.. +.+|..+++ +.++...+.+..- ....++.|++++++++|.+||+
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~--d~~~~~~~~~~~~---------~g~~~~~pND~~v~~~G~fyvt 181 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKF--QEEEKSLLHLKTI---------RHKLLPSVNDIVAVGPEHFYAT 181 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEE--ETTTTEEEEEEEE---------CCTTCSSEEEEEEEETTEEEEE
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEE--ECCCCEEEEEecc---------ccCCCCCCceEEEeCCCCEEec
Confidence 8999998542 33 69999986 566655554 3444444443220 1236899999999999999998
Q ss_pred eC-----------------CCCEEEEEeCCcceEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeE
Q 024317 121 DK-----------------SNHVIRKITNLGVTTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLI 183 (269)
Q Consensus 121 D~-----------------~n~~I~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I 183 (269)
+. ..++|.++++.....++. .+..||||+++|++..|||+|+..++|
T Consensus 182 ~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~----------------~l~~pNGia~spDg~~lYvadt~~~~I 245 (355)
T 3sre_A 182 NDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE----------------GFDFANGINISPDGKYVYIAELLAHKI 245 (355)
T ss_dssp ESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEE----------------EESSEEEEEECTTSSEEEEEEGGGTEE
T ss_pred CCcEeCCcccccchhhccCCccEEEEEECCeEEEeec----------------CCcccCcceECCCCCEEEEEeCCCCeE
Confidence 75 246788888742244432 278899999999977999999999999
Q ss_pred EEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEec-CCcEEEEcC
Q 024317 184 RQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGF-VARPYIIRH 234 (269)
Q Consensus 184 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~-~g~lyVad~ 234 (269)
++|+.+.......... +. ....|.|+++|. +|++||+.+
T Consensus 246 ~~~~~~~~g~l~~~~~---------~~---~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 246 HVYEKHANWTLTPLRV---------LS---FDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEECTTSCEEEEEE---------EE---CSSEEEEEEECTTTCCEEEEEE
T ss_pred EEEEECCCCcEecCEE---------Ee---CCCCCceEEEeCCCCcEEEEec
Confidence 9999764321111000 00 125699999999 599999774
No 52
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=5.7e-12 Score=111.84 Aligned_cols=170 Identities=12% Similarity=0.064 Sum_probs=111.7
Q ss_pred CCcceEEEecCCCeEEEEeCC--C--CEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEE
Q 024317 45 INPHSVIDRPGSSDLIVLDSS--R--SAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVA 120 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~--~--~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVa 120 (269)
..|.+|+++ .+|++||+... . .+|++++ +|++..+.... ......+..|.+|++|++|+|||+
T Consensus 17 ~~p~~va~~-~~g~~~v~~~~~~~~~~~l~~~~-----~g~~~~~p~~~-------~~~~~~~~~p~gv~~d~~g~L~v~ 83 (343)
T 2qe8_A 17 LAPGNITLT-PDGRLFLSLHQFYQPEMQVAELT-----QDGLIPFPPQS-------GNAIITFDTVLGIKSDGNGIVWML 83 (343)
T ss_dssp SCEEEEEEC-TTSCEEEEECGGGCCSCSEEEEE-----TTEEEESCCCC-------SSCCCCCSCEEEEEECSSSEEEEE
T ss_pred CCcceEEEC-CCCCEEEEeCCCCCCceEEEEEC-----CCCeecCCCcc-------cCcccceeEeeEEEEcCCCcEEEE
Confidence 589999996 48999999642 2 3788873 56554332110 012246889999999999999999
Q ss_pred eCC-----CCEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEEC---CCCeEEEEECCC
Q 024317 121 DKS-----NHVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDH---GNQLIRQINLKP 190 (269)
Q Consensus 121 D~~-----n~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~---~n~~I~~~~~~~ 190 (269)
|.+ .++|.++|.+ |+ ......+... ......|++|+++++++.+||+|. .++.|++++...
T Consensus 84 D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~---------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 84 DNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI---------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp ECHHHHTSCCEEEEEETTTTEEEEEEECCTTT---------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred cCCCCcCCCCeEEEEECCCCeEEEEEECChhh---------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence 987 5899999975 65 3322221100 011356899999987689999999 889999999876
Q ss_pred CeEEEeccc--CccCCCcccceeeee-------------ccceeeEEEecCC-cEEEEcCCC
Q 024317 191 EDCSKSSQS--GSALGAVSVWVLVSV-------------LSCLVSLVIGFVA-RPYIIRHTG 236 (269)
Q Consensus 191 ~~~~~~~~~--g~~~g~~~~~~~~~~-------------l~~p~gia~d~~g-~lyVad~~g 236 (269)
......... ........++..+.. ...|.||+++++| .+|+++..+
T Consensus 155 g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~ 216 (343)
T 2qe8_A 155 GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS 216 (343)
T ss_dssp CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence 554443211 100000111111111 1458999999999 699999655
No 53
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.43 E-value=6.8e-12 Score=108.39 Aligned_cols=159 Identities=11% Similarity=0.128 Sum_probs=109.4
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEE-EcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRL-AGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~-~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~ 123 (269)
..|.+++++++++++||++..+ .|+++|. +|++..+ .... ....+..|.+|++|++|++||++..
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~-~l~~~d~----~g~~~~~~~~~~---------~~~~~~~~~~i~~d~~g~l~v~~~~ 136 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRL-GLLVVQT----DGTFEEIAKKDS---------EGRRMQGCNDCAFDYEGNLWITAPA 136 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTT-EEEEEET----TSCEEECCSBCT---------TSCBCBCCCEEEECTTSCEEEEECB
T ss_pred CCCceEEEecCCCcEEEEECCC-CEEEEeC----CCCEEEEEeccC---------CCccccCCcCEEECCCCCEEEEecC
Confidence 5799999964339999999754 8999964 3776654 3211 0123568999999999999999986
Q ss_pred C---------------CEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEe----CCCCEEEEEECCCCeE
Q 024317 124 N---------------HVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFV----PHICALLISDHGNQLI 183 (269)
Q Consensus 124 n---------------~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~----~~~g~LyVaD~~n~~I 183 (269)
. ++|.++++++. ..+.. .+..|++++++ +++..|||++..+++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~----------------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i 200 (314)
T 1pjx_A 137 GEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDT----------------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKL 200 (314)
T ss_dssp CBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEE----------------EESSEEEEEEEECTTSCEEEEEEEETTTTEE
T ss_pred cccccccccccccCCCCeEEEECCCCCEEEecc----------------CCCCcceEEEecccCCCCCEEEEEECCCCeE
Confidence 5 68999998876 44432 15678999999 8844799999999999
Q ss_pred EEEECCC-CeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCcccc
Q 024317 184 RQINLKP-EDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDPP 241 (269)
Q Consensus 184 ~~~~~~~-~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~~ 241 (269)
++++.+. +......... ..... .+..|.+|++|++|++||++. .+++...
T Consensus 201 ~~~~~~~~g~~~~~~~~~-~~~~~-------~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 201 WSYDIKGPAKIENKKVWG-HIPGT-------HEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp EEEEEEETTEEEEEEEEE-ECCCC-------SSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred EEEECCCCCccccceEEE-ECCCC-------CCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 9998652 2211100000 00000 014589999999999999983 4455433
No 54
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.43 E-value=5.2e-12 Score=111.50 Aligned_cols=142 Identities=9% Similarity=-0.016 Sum_probs=103.6
Q ss_pred CCCcceEEEecCCCeEEEEeCC-CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSS-RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~-~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
...|.+|++ .++.+||++++ .+.|.++|+ .++++...+.. -..|.+++++++|++||++.
T Consensus 130 ~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~---~t~~~~~~i~~--------------g~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 130 SGSTEQMVQ--YGKYVYVNCWSYQNRILKIDT---ETDKVVDELTI--------------GIQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp TCBCCCEEE--ETTEEEEEECTTCCEEEEEET---TTTEEEEEEEC--------------SSCBCCCEECTTSEEEEEBC
T ss_pred CCCcceEEE--ECCEEEEEcCCCCCEEEEEEC---CCCeEEEEEEc--------------CCCccceEEcCCCCEEEEEC
Confidence 348999999 48999999985 899999985 45665544322 13789999999999999998
Q ss_pred CC----------CEEEEEeCCc-c-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCC
Q 024317 123 SN----------HVIRKITNLG-V-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKP 190 (269)
Q Consensus 123 ~n----------~~I~~~~~~g-~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~ 190 (269)
++ ++|.++|+.. + ......+. -..|++|+++++++.|||++. .|++++...
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~--------------g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t 253 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL--------------GDWPSEVQLNGTRDTLYWINN---DIWRMPVEA 253 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT--------------TCCCEEEEECTTSCEEEEESS---SEEEEETTC
T ss_pred CCccCCccccCCceEEEEECCCCeEEEEEecCC--------------CCCceeEEEecCCCEEEEEcc---EEEEEECCC
Confidence 76 8999999764 3 22222110 136999999998889999986 799999876
Q ss_pred CeEEEecccCccCCCcccceeeeeccceeeEEEec-CCcEEEEc
Q 024317 191 EDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGF-VARPYIIR 233 (269)
Q Consensus 191 ~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~-~g~lyVad 233 (269)
..+...... .. ....|.||++|+ +|+|||++
T Consensus 254 ~~~~~~~~~--~~----------~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 254 DRVPVRPFL--EF----------RDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp SSCCSSCSB--CC----------CSSCEEEEEECTTTCCEEEEE
T ss_pred Cceeeeeee--cC----------CCCceEEEEEcCCCCeEEEEc
Confidence 543210000 00 126799999997 77999998
No 55
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.40 E-value=2.3e-11 Score=105.55 Aligned_cols=150 Identities=10% Similarity=-0.057 Sum_probs=109.3
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
.+..++|.++++.++.+|++|..+++|+++|. ..+....+. . -..|.+++++++|++||+.
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~---~~~~~~~~~-~--------------~~~~~~i~~~~dG~l~v~~- 71 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDS---FTKQVQRVT-M--------------DAPVSSVALRQSGGYVATI- 71 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEET---TTCCEEEEE-C--------------SSCEEEEEEBTTSSEEEEE-
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEEC---CCCcEEEEe-C--------------CCceEEEEECCCCCEEEEE-
Confidence 45579999998778999999999999999975 344444332 1 1368899999999999998
Q ss_pred CCCEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-----------CCeEEEEECC
Q 024317 123 SNHVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-----------NQLIRQINLK 189 (269)
Q Consensus 123 ~n~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-----------n~~I~~~~~~ 189 (269)
.+.|.+++++ +. ..+...... ..++.|++++++++ |++||++.. .++|++++.+
T Consensus 72 -~~~l~~~d~~~g~~~~~~~~~~~-----------~~~~~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~ 138 (297)
T 3g4e_A 72 -GTKFCALNWKEQSAVVLATVDND-----------KKNNRFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPD 138 (297)
T ss_dssp -TTEEEEEETTTTEEEEEEECCTT-----------CSSEEEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTT
T ss_pred -CCeEEEEECCCCcEEEEEecCCC-----------CCCCCCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECC
Confidence 5799999976 44 554432110 12567999999997 889999843 4578888876
Q ss_pred CCeEEEecccCccCCCcccceeeeeccceeeEEEecCC-cEEEEcC-CCCccc
Q 024317 190 PEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRH-TGRLDP 240 (269)
Q Consensus 190 ~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~-~g~~~~ 240 (269)
+....... .+..|.||+++++| .+|+++. .++++.
T Consensus 139 g~~~~~~~----------------~~~~pngi~~spdg~~lyv~~~~~~~i~~ 175 (297)
T 3g4e_A 139 HHVKKYFD----------------QVDISNGLDWSLDHKIFYYIDSLSYSVDA 175 (297)
T ss_dssp SCEEEEEE----------------EESBEEEEEECTTSCEEEEEEGGGTEEEE
T ss_pred CCEEEEee----------------ccccccceEEcCCCCEEEEecCCCCcEEE
Confidence 65433211 23669999999999 5999984 455554
No 56
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.36 E-value=1.2e-10 Score=102.67 Aligned_cols=147 Identities=11% Similarity=0.008 Sum_probs=107.6
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS 123 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~ 123 (269)
...|.+|++++ ++.+||++...++|.++|+ .++++...+..+. ...++..|.+|++ .++.|||++.+
T Consensus 83 ~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~---~t~~~~~~i~~g~--------~~~~~~~p~~i~~-~~~~lyv~~~~ 149 (328)
T 3dsm_A 83 FTSPRYIHFLS-DEKAYVTQIWDYRIFIINP---KTYEITGYIECPD--------MDMESGSTEQMVQ-YGKYVYVNCWS 149 (328)
T ss_dssp CSSEEEEEEEE-TTEEEEEEBSCSEEEEEET---TTTEEEEEEECTT--------CCTTTCBCCCEEE-ETTEEEEEECT
T ss_pred CCCCcEEEEeC-CCeEEEEECCCCeEEEEEC---CCCeEEEEEEcCC--------ccccCCCcceEEE-ECCEEEEEcCC
Confidence 56899999965 5799999977899999985 4666654432221 1123568999999 68889999984
Q ss_pred -CCEEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC----------CeEEEEECC
Q 024317 124 -NHVIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN----------QLIRQINLK 189 (269)
Q Consensus 124 -n~~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n----------~~I~~~~~~ 189 (269)
.++|.++|... + .++.. -..|.+|+++++ |.+||++.++ ++|.+++..
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~-----------------g~~p~~i~~~~d-G~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTI-----------------GIQPTSLVMDKY-NKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEEC-----------------SSCBCCCEECTT-SEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred CCCEEEEEECCCCeEEEEEEc-----------------CCCccceEEcCC-CCEEEEECCCccCCccccCCceEEEEECC
Confidence 88999999754 3 23221 246899999997 8999999876 899999988
Q ss_pred CCeEEEecccCccCCCcccceeeeeccceeeEEEecCC-cEEEEcC
Q 024317 190 PEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRH 234 (269)
Q Consensus 190 ~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~ 234 (269)
...+...... +.+ ..|.+|++++++ .+|+++.
T Consensus 212 t~~v~~~~~~--~~g-----------~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 212 TFTVEKQFKF--KLG-----------DWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp TTEEEEEEEC--CTT-----------CCCEEEEECTTSCEEEEESS
T ss_pred CCeEEEEEec--CCC-----------CCceeEEEecCCCEEEEEcc
Confidence 7655432111 111 359999999876 8899886
No 57
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.36 E-value=1.6e-11 Score=110.04 Aligned_cols=179 Identities=8% Similarity=-0.011 Sum_probs=113.6
Q ss_pred eecCCCcEEEEEecCccCCCCcceEEEecCCCe-EEEEeCCCCEEEEEecCCCCCccEEE-EEcCCcccCCCCCcccccC
Q 024317 26 LLLEDGYTVTTVIDGHQLEINPHSVIDRPGSSD-LIVLDSSRSAFYTLSFPLSEESVVKR-LAGDGVQGYSDGEPGSARF 103 (269)
Q Consensus 26 ~~~~~g~~~~~~~~g~~~~~~P~giav~~~~g~-lyV~D~~~~~I~~~dl~~~~~g~~~~-~~g~g~~g~~dg~~~~~~~ 103 (269)
..+++|+.++.+.. .+..|.+|++++ +|+ +||++. .++|++++ .+|.... +.+... ......
T Consensus 2 ~~~p~g~~~~~va~---~l~~P~~i~~~p-dG~~l~V~e~-~G~i~~~~----~~g~~~~~~~~~~~-------v~~~g~ 65 (353)
T 2g8s_A 2 AMAPATVNVEVLQD---KLDHPWALAFLP-DNHGMLITLR-GGELRHWQ----AGKGLSAPLSGVPD-------VWAHGQ 65 (353)
T ss_dssp ----CCSEEEEEEE---EESSEEEEEECS-TTCCEEEEET-TTEEEEEE----TTTEECCCCBSCCC-------CCCSTT
T ss_pred CCCCCCcEEEEEEC---CCCCcEEEEEcC-CCCEEEEEeC-CceEEEEe----CCCceeeEecCCcc-------cccCCC
Confidence 35678888988875 466999999975 788 999997 48999995 4555432 211110 001123
Q ss_pred CCCceEEEcC----CCCEEEEeCC-------CCEEEEEeCCc---c----eEEe-cCCCCCCCCCCCccccccccCceEE
Q 024317 104 DKPKSFAVDM----KGNIYVADKS-------NHVIRKITNLG---V----TTIA-GGGSKKEGRADGPAQNASFSNDFEL 164 (269)
Q Consensus 104 ~~P~giavd~----~G~lyVaD~~-------n~~I~~~~~~g---~----~~~~-g~~~~~~~~~~~~~~~~~l~~P~gi 164 (269)
..|.+|++++ ++.|||++.. .++|.+++.++ . ..+. +.... ......|.+|
T Consensus 66 ~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~----------~~~~h~~~~l 135 (353)
T 2g8s_A 66 GGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKL----------STGNHFGGRL 135 (353)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCC----------BSSSCCCCCE
T ss_pred CCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCC----------CCCcccCccE
Confidence 4678999998 5889999865 46888887432 1 2222 21100 1124668999
Q ss_pred EEeCCCCEEEEEECC-------------CCeEEEEECCCCeEEEecccC--ccCCCcccceeeeeccceeeEEEec-CCc
Q 024317 165 TFVPHICALLISDHG-------------NQLIRQINLKPEDCSKSSQSG--SALGAVSVWVLVSVLSCLVSLVIGF-VAR 228 (269)
Q Consensus 165 a~~~~~g~LyVaD~~-------------n~~I~~~~~~~~~~~~~~~~g--~~~g~~~~~~~~~~l~~p~gia~d~-~g~ 228 (269)
+++++ |.|||+... .++|+++++++..-. ..+- ........|.. .+..|.|+++|+ .|+
T Consensus 136 ~~~pd-G~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~--~npf~~~~~~~~~i~a~--G~rnp~gl~~d~~~g~ 210 (353)
T 2g8s_A 136 VFDGK-GYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD--DNPFIKESGVRAEIWSY--GIRNPQGMAMNPWSNA 210 (353)
T ss_dssp EECSS-SEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT--TCTTTTSTTSCTTEEEE--CCSEEEEEEEETTTTE
T ss_pred EECCC-CcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC--CCCCcCCCCCCccEEEE--cCcCccceEEECCCCC
Confidence 99998 899999643 358999999875211 1110 00012223332 357799999999 899
Q ss_pred EEEEcCC
Q 024317 229 PYIIRHT 235 (269)
Q Consensus 229 lyVad~~ 235 (269)
||++|+.
T Consensus 211 l~~~d~g 217 (353)
T 2g8s_A 211 LWLNEHG 217 (353)
T ss_dssp EEEEEEC
T ss_pred EEEEecC
Confidence 9999965
No 58
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.35 E-value=4e-11 Score=103.52 Aligned_cols=158 Identities=9% Similarity=0.031 Sum_probs=113.2
Q ss_pred CCCCcceEEEecCCCeEEEE-------eCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCC-
Q 024317 43 LEINPHSVIDRPGSSDLIVL-------DSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK- 114 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~-------D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~- 114 (269)
.+..|.+++++ .++++|++ +...++|+++|. .+|++..+.... .......|.+++++++
T Consensus 16 ~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~---~~g~~~~~~~~~---------~~~~~~~~~~i~~~~~~ 82 (314)
T 1pjx_A 16 DIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDL---KTGKKTVICKPE---------VNGYGGIPAGCQCDRDA 82 (314)
T ss_dssp CCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECT---TTCCEEEEECCE---------ETTEECCEEEEEECSSS
T ss_pred cCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeC---CCCcEEEEEecc---------cCCCCCCCceEEEecCC
Confidence 56789999996 68899999 888899999963 467766553210 0012357999999999
Q ss_pred CCEEEEeCCCCEEEEEeCCcc-eEE-ecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC------------
Q 024317 115 GNIYVADKSNHVIRKITNLGV-TTI-AGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN------------ 180 (269)
Q Consensus 115 G~lyVaD~~n~~I~~~~~~g~-~~~-~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n------------ 180 (269)
|+|||++..+ .|.+++.+|. ..+ ..... ......|++|+++++ |+|||++..+
T Consensus 83 g~l~v~~~~~-~l~~~d~~g~~~~~~~~~~~-----------~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~~~~~ 149 (314)
T 1pjx_A 83 NQLFVADMRL-GLLVVQTDGTFEEIAKKDSE-----------GRRMQGCNDCAFDYE-GNLWITAPAGEVAPADYTRSMQ 149 (314)
T ss_dssp SEEEEEETTT-EEEEEETTSCEEECCSBCTT-----------SCBCBCCCEEEECTT-SCEEEEECBCBCTTSCCCBTTS
T ss_pred CcEEEEECCC-CEEEEeCCCCEEEEEeccCC-----------CccccCCcCEEECCC-CCEEEEecCccccccccccccc
Confidence 9999999854 8999998876 444 32110 012567999999997 8999999865
Q ss_pred ---CeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEe----cCC-cEEEEcC-CCCccccc
Q 024317 181 ---QLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIG----FVA-RPYIIRH-TGRLDPPL 242 (269)
Q Consensus 181 ---~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d----~~g-~lyVad~-~g~~~~~~ 242 (269)
++|++++.++....... .+..|.+++++ ++| .+||++. .+++....
T Consensus 150 ~~~~~l~~~~~~g~~~~~~~----------------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~ 204 (314)
T 1pjx_A 150 EKFGSIYCFTTDGQMIQVDT----------------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYD 204 (314)
T ss_dssp SSCEEEEEECTTSCEEEEEE----------------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEE
T ss_pred CCCCeEEEECCCCCEEEecc----------------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEE
Confidence 68999987754332211 22568899999 999 7999984 45565443
No 59
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.34 E-value=1.4e-10 Score=101.21 Aligned_cols=160 Identities=14% Similarity=0.105 Sum_probs=111.0
Q ss_pred CCcceEEEecCCCeEEEEeCC------CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-E
Q 024317 45 INPHSVIDRPGSSDLIVLDSS------RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-I 117 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~------~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-l 117 (269)
..|.+++++++++.+|+++.. .+.|+++|. .++++......+ ..|.+++++++|+ +
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~---~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l 103 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDP---VTLEVTQAIHND--------------LKPFGATINNTTQTL 103 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECT---TTCCEEEEEEES--------------SCCCSEEEETTTTEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcC---CCCeEEEEEecC--------------CCcceEEECCCCCEE
Confidence 369999999877899999976 668999974 455554443221 2588999999998 9
Q ss_pred EEEeCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEEC-CCCeEEEEECCCCeE
Q 024317 118 YVADKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDH-GNQLIRQINLKPEDC 193 (269)
Q Consensus 118 yVaD~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~-~n~~I~~~~~~~~~~ 193 (269)
||++...+.|.++|.. ++ ..+....... ........|.+++++++++.||+++. .+++|++++......
T Consensus 104 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 104 WFGNTVNSAVTAIDAKTGEVKGRLVLDDRKR-------TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL 176 (353)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEESCCCCC-------CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE
T ss_pred EEEecCCCEEEEEeCCCCeeEEEEecCCCcc-------ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce
Confidence 9999998999999975 44 2332211000 00011234889999999788999994 578899999887655
Q ss_pred EEecccCccCCCcccceeeeeccceeeEEEecCC-cEEEEcCCCCccccc
Q 024317 194 SKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRHTGRLDPPL 242 (269)
Q Consensus 194 ~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~~g~~~~~~ 242 (269)
...... .+ ..|.+++++++| .+|+++.++.+...+
T Consensus 177 ~~~~~~---~~-----------~~~~~~~~s~dg~~l~~~~~~~~i~~~d 212 (353)
T 3vgz_A 177 KTAIQN---TG-----------KMSTGLALDSEGKRLYTTNADGELITID 212 (353)
T ss_dssp EEEECC---CC-----------TTCCCCEEETTTTEEEEECTTSEEEEEE
T ss_pred EEEecC---CC-----------CccceEEECCCCCEEEEEcCCCeEEEEE
Confidence 433221 01 347788999888 588888776665443
No 60
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.34 E-value=4.1e-11 Score=110.95 Aligned_cols=179 Identities=13% Similarity=0.106 Sum_probs=117.6
Q ss_pred ecCCCcEEEEEecCccCCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCC
Q 024317 27 LLEDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKP 106 (269)
Q Consensus 27 ~~~~g~~~~~~~~g~~~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P 106 (269)
.++.++.++.+.++ +..|.+|++.+ +|+|||++...++|++++. .+|+...+..... ... .......+
T Consensus 12 ~~~~gf~~~~~a~~---l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~---~~g~~~~~~~~~~-~~~----~~~g~~Gl 79 (454)
T 1cru_A 12 AKSENFDKKVILSN---LNKPHALLWGP-DNQIWLTERATGKILRVNP---ESGSVKTVFQVPE-IVN----DADGQNGL 79 (454)
T ss_dssp CCCTTSCEEEEECC---CSSEEEEEECT-TSCEEEEETTTCEEEEECT---TTCCEEEEEECTT-CCC----CTTSSCSE
T ss_pred CCCCCeEEEEEECC---CCCceEEEEcC-CCcEEEEEcCCCEEEEEEC---CCCcEeEEecCCc-ccc----ccCCCCce
Confidence 56788889988754 67999999964 8999999998889999952 3577666543211 000 00112356
Q ss_pred ceEEEcC----CCCEEEEeCC------------CCEEEEEeCCc------c-eEEe-cCCCCCCCCCCCccccccccCce
Q 024317 107 KSFAVDM----KGNIYVADKS------------NHVIRKITNLG------V-TTIA-GGGSKKEGRADGPAQNASFSNDF 162 (269)
Q Consensus 107 ~giavd~----~G~lyVaD~~------------n~~I~~~~~~g------~-~~~~-g~~~~~~~~~~~~~~~~~l~~P~ 162 (269)
.||++++ ++.|||+++. .++|.+++.+. . ..+. +... .....+.
T Consensus 80 lgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~------------~~~H~~~ 147 (454)
T 1cru_A 80 LGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS------------SKDHQSG 147 (454)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC------------CSSCCEE
T ss_pred eEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC------------CCCCCCC
Confidence 7999998 7889999964 46888887432 1 2222 1111 1246789
Q ss_pred EEEEeCCCCEEEEEECC--------------------------------CCeEEEEECCCCeEEEecccCccCC-Ccccc
Q 024317 163 ELTFVPHICALLISDHG--------------------------------NQLIRQINLKPEDCSKSSQSGSALG-AVSVW 209 (269)
Q Consensus 163 gia~~~~~g~LyVaD~~--------------------------------n~~I~~~~~~~~~~~~~~~~g~~~g-~~~~~ 209 (269)
+|+++++ |.|||+-.. .++|+|+++++..- ...+ +..+ ....|
T Consensus 148 ~l~f~pD-G~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip--~~Np-f~~~~~~ei~ 223 (454)
T 1cru_A 148 RLVIGPD-QKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIP--KDNP-SFNGVVSHIY 223 (454)
T ss_dssp EEEECTT-SCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCC--TTCC-EETTEECSEE
T ss_pred eEeECCC-CeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCC--CCCC-CCCCCcceEE
Confidence 9999998 899998432 36789998877511 0000 0000 11223
Q ss_pred eeeeeccceeeEEEecCCcEEEEcCC
Q 024317 210 VLVSVLSCLVSLVIGFVARPYIIRHT 235 (269)
Q Consensus 210 ~~~~~l~~p~gia~d~~g~lyVad~~ 235 (269)
.. .+-.|.|+++|++|+||++|+.
T Consensus 224 a~--G~RNp~gla~dp~G~L~~~d~g 247 (454)
T 1cru_A 224 TL--GHRNPQGLAFTPNGKLLQSEQG 247 (454)
T ss_dssp EB--CCSEEEEEEECTTSCEEEEEEC
T ss_pred EE--CCCCcceEEECCCCCEEEEecC
Confidence 32 3467999999999999999964
No 61
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.34 E-value=4.7e-11 Score=105.36 Aligned_cols=179 Identities=6% Similarity=-0.036 Sum_probs=116.1
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEE---cCCCCEEE
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAV---DMKGNIYV 119 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giav---d~~G~lyV 119 (269)
...+|+++++++.++.+||++..+++|.+++. ..+.+..+.=.+.. .+| .....|.||.+ |++|.|||
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~---~~~~~~~~~~~~~s--~~g----~~~~~~sGl~~~~~D~~grL~v 81 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNP---KTQSHFNVVIDGAS--SNG----DGEQQMSGLSLLTHDNSKRLFA 81 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECT---TTCCEEEECCTTTC--CSS----CCSEEEEEEEESSSSSCCEEEE
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcC---CCCeEEEEecCCcc--ccC----CCcceeeEEEEeccCCCCcEEE
Confidence 44589999998778999999999999999953 22444433111100 001 11235689999 78999998
Q ss_pred -EeC------------CCCEEEEEeCC----cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC-
Q 024317 120 -ADK------------SNHVIRKITNL----GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN- 180 (269)
Q Consensus 120 -aD~------------~n~~I~~~~~~----g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n- 180 (269)
+|. +.+.+.++|.. ++ ...+.......+.. ......+..|++|++|++ |++||+|+..
T Consensus 82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~--~~~g~~~~~~nDvavD~~-GnaYVt~s~~~ 158 (334)
T 2p9w_A 82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFE--KKAGKRPFGVVQSAQDRD-GNSYVAFALGM 158 (334)
T ss_dssp EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHH--HHHSSCCEEEEEEEECTT-SCEEEEEEESS
T ss_pred EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccccc--ccccccccCCceeEECCC-CCEEEeCCCCC
Confidence 662 36789999977 65 43333210000000 000002345899999997 9999999999
Q ss_pred CeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCC-cEEEEcCCCCccccc
Q 024317 181 QLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRHTGRLDPPL 242 (269)
Q Consensus 181 ~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~~g~~~~~~ 242 (269)
+.|++++++|.....+.... +.. .....+.||+++++| .|+|++..|++..-+
T Consensus 159 ~~I~rV~pdG~~~~~~~~~~-~~~--------~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 159 PAIARVSADGKTVSTFAWES-GNG--------GQRPGYSGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp CEEEEECTTSCCEEEEEECC-CCS--------SSCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred CeEEEEeCCCCEEeeeeecC-CCc--------ccccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 99999999998665443221 111 023568999999999 566676777776544
No 62
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.31 E-value=1.8e-10 Score=102.79 Aligned_cols=174 Identities=14% Similarity=0.080 Sum_probs=114.6
Q ss_pred CCcEEEEEecCccCCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceE
Q 024317 30 DGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSF 109 (269)
Q Consensus 30 ~g~~~~~~~~g~~~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~gi 109 (269)
+...++++.+ .+..|.+|++.+ +|.+||++...++|++++ ..+|+...+.+... ........|.||
T Consensus 20 ~~~~~~~va~---gL~~P~~ia~~p-dG~llVter~~G~I~~v~---~~~g~~~~v~~~~~-------v~~~g~~GllGi 85 (347)
T 3das_A 20 SVKVLRTVAT---GLNSPWGLAPLP-GGDLLVSSRDEATITRVD---AKTGRKTELGEVPG-------VSPSGEGGLLGI 85 (347)
T ss_dssp CEEEEEEEEC---CCSSEEEEEECT-TSCEEEEETTTCEEEEEC---TTTCCEEEEEECTT-------CCCBTTBSEEEE
T ss_pred CCceeEEeec---CCCCceEEEEcC-CCcEEEEEecCCEEEEEE---CCCCcEeeecccCc-------eeecCCCCceee
Confidence 4456666654 466999999974 789999999889999995 23466554432210 011234578999
Q ss_pred EEcC----CCCEEEEeC--CCCEEEEEeCCc---------c-eEEe-cCCCCCCCCCCCccccccccCceEEEEeCCCCE
Q 024317 110 AVDM----KGNIYVADK--SNHVIRKITNLG---------V-TTIA-GGGSKKEGRADGPAQNASFSNDFELTFVPHICA 172 (269)
Q Consensus 110 avd~----~G~lyVaD~--~n~~I~~~~~~g---------~-~~~~-g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~ 172 (269)
++++ +|.|||+.+ ..++|.++..++ . ..+. +... .....+..|+++++ |.
T Consensus 86 a~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~------------~~~H~g~~l~fgpD-G~ 152 (347)
T 3das_A 86 ALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK------------GVIHNGGRIAFGPD-KM 152 (347)
T ss_dssp EECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC------------CSSCCCCCEEECTT-SC
T ss_pred EeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC------------CCCccCccccCCCC-CC
Confidence 9997 588999764 467999987544 1 2221 2111 12456778999998 89
Q ss_pred EEEEEC-------------CCCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCC
Q 024317 173 LLISDH-------------GNQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGR 237 (269)
Q Consensus 173 LyVaD~-------------~n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~ 237 (269)
|||+-. ..++|+++++++..- ...+.-....|.. .+-.|.|+++|++|+||++|+..+
T Consensus 153 Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip-----~~nPf~~~~i~a~--G~RNp~Gla~dp~G~L~~~d~g~~ 223 (347)
T 3das_A 153 LYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA-----PGNPFPGSPVYSY--GHRNVQGLAWDDKQRLFASEFGQD 223 (347)
T ss_dssp EEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC-----TTCSSTTCCEEEB--CCSBCCEEEECTTCCEEEEECCSS
T ss_pred EEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc-----CCCCCCCCeEEee--CCCCcceEEECCCCCEEEEecCCC
Confidence 999942 357899999887521 0001111223333 346799999999999999997543
No 63
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.31 E-value=1.2e-10 Score=101.60 Aligned_cols=159 Identities=13% Similarity=0.043 Sum_probs=108.7
Q ss_pred CCcceEEEecCCCeEEEEeCCC----CEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEE
Q 024317 45 INPHSVIDRPGSSDLIVLDSSR----SAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVA 120 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~----~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVa 120 (269)
..|.+|+++ .+|++||++... +.|+++|. ..+.+..+.... .....|.+|++|++|++||+
T Consensus 87 ~~~~~i~~~-~dg~l~v~~~~~~~~~~~i~~~d~---~~~~~~~~~~~~-----------~~~~~~~~i~~d~~g~l~v~ 151 (333)
T 2dg1_A 87 ANPAAIKIH-KDGRLFVCYLGDFKSTGGIFAATE---NGDNLQDIIEDL-----------STAYCIDDMVFDSKGGFYFT 151 (333)
T ss_dssp SSEEEEEEC-TTSCEEEEECTTSSSCCEEEEECT---TSCSCEEEECSS-----------SSCCCEEEEEECTTSCEEEE
T ss_pred CCcceEEEC-CCCcEEEEeCCCCCCCceEEEEeC---CCCEEEEEEccC-----------ccCCcccceEECCCCCEEEE
Confidence 468999996 478999999876 79999964 344444332110 01357899999999999999
Q ss_pred eCC------CCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC--C
Q 024317 121 DKS------NHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK--P 190 (269)
Q Consensus 121 D~~------n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~--~ 190 (269)
+.. +.+|.++++++. ..+.. .+..|+++++++++..|||++..+++|++++.+ +
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g 215 (333)
T 2dg1_A 152 DFRGYSTNPLGGVYYVSPDFRTVTPIIQ----------------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDG 215 (333)
T ss_dssp ECCCBTTBCCEEEEEECTTSCCEEEEEE----------------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred eccccccCCCceEEEEeCCCCEEEEeec----------------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCC
Confidence 975 478999998763 33322 145689999999855799999988999999984 3
Q ss_pred CeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCccccc
Q 024317 191 EDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDPPL 242 (269)
Q Consensus 191 ~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~~~ 242 (269)
.....+....... .. ....|.+|++|++|++||++. .+++...+
T Consensus 216 ~~~~~~~~~~~~~------~~--~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 216 VTIQPFGATIPYY------FT--GHEGPDSCCIDSDDNLYVAMYGQGRVLVFN 260 (333)
T ss_dssp SSEEEEEEEEEEE------CC--SSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred cCcccccceEEEe------cC--CCCCCCceEECCCCCEEEEEcCCCEEEEEC
Confidence 3332211000000 00 013689999999999999984 45555433
No 64
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.30 E-value=3.8e-11 Score=107.43 Aligned_cols=175 Identities=13% Similarity=0.069 Sum_probs=100.1
Q ss_pred CCCcceEEEecC---CCeEEEEeCCC-----CEEEEEecCCCCCccE---EEEEc-CCcccCCCCCcccccCCCCceEEE
Q 024317 44 EINPHSVIDRPG---SSDLIVLDSSR-----SAFYTLSFPLSEESVV---KRLAG-DGVQGYSDGEPGSARFDKPKSFAV 111 (269)
Q Consensus 44 ~~~P~giav~~~---~g~lyV~D~~~-----~~I~~~dl~~~~~g~~---~~~~g-~g~~g~~dg~~~~~~~~~P~giav 111 (269)
...|.||+++|+ ++.|||++..+ ++|.++++. ++.+ ..+.. ... .......|.+|++
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~---~~~~~~~~~l~~~~p~--------~~~~~h~~~~l~~ 142 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL---GERGVLDRVVLDGIPA--------RPHGLHSGGRIAF 142 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC---SSCEEEEEEEEEEECC--------CTTCCCCCCCEEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC---CCCcCceEEEEEeCCC--------CCCCCcCCceEEE
Confidence 468999999765 58999999864 899999763 2222 22211 110 0123457899999
Q ss_pred cCCCCEEEEeCC-------------CCEEEEEeCCcceEEecCCCCCCCCC---CCccccccccCceEEEEeCCCCEEEE
Q 024317 112 DMKGNIYVADKS-------------NHVIRKITNLGVTTIAGGGSKKEGRA---DGPAQNASFSNDFELTFVPHICALLI 175 (269)
Q Consensus 112 d~~G~lyVaD~~-------------n~~I~~~~~~g~~~~~g~~~~~~~~~---~~~~~~~~l~~P~gia~~~~~g~LyV 175 (269)
+++|.|||++.. .++|.+++++|... .+. .+... ........+..|+||+++++.+.||+
T Consensus 143 ~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p-~~n---pf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v 218 (352)
T 2ism_A 143 GPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPA-PGN---PFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFS 218 (352)
T ss_dssp CTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBC-TTC---TTTTCTTSCTTEEEECCSEECCCEECTTTCCEEE
T ss_pred CCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCC-CCC---cccCCCCCCccEEEEcCCCcccEEEECCCCCEEE
Confidence 999999999742 36999999988310 000 00000 00011123678999999996699999
Q ss_pred EECCCCe--------EEEEECCCCeEE--EecccCccCC-CcccceeeeeccceeeEEEecCCcEEEEcCCC
Q 024317 176 SDHGNQL--------IRQINLKPEDCS--KSSQSGSALG-AVSVWVLVSVLSCLVSLVIGFVARPYIIRHTG 236 (269)
Q Consensus 176 aD~~n~~--------I~~~~~~~~~~~--~~~~~g~~~g-~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g 236 (269)
+|.+.++ |.++...+..-. ..+.. ...+ ....+.. .....|.|+++ .+|++||++..+
T Consensus 219 ~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~-~~~~~~~p~~~~-~~~~ap~G~~~-~~G~l~v~~~~~ 287 (352)
T 2ism_A 219 SEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRG-NDPRYRDPLYFW-PQGFPPGNLAF-FRGDLYVAGLRG 287 (352)
T ss_dssp EEECC------CCCEEEEECTTCBCCTTTCCSCC-CCTTSCCCSEEC-TTCCCEEEEEE-ETTEEEEEETTT
T ss_pred EEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCC-CCCCCcCCeEec-CCCCCCcceEE-ECCEEEEEECCC
Confidence 9998877 444432211000 00000 0000 0000000 01246999999 579999999554
No 65
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.29 E-value=6.4e-10 Score=97.02 Aligned_cols=152 Identities=13% Similarity=0.120 Sum_probs=109.8
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
....|.+++++ .++++|+++...+.|+++|. .++++..+... .-..|.+|+++++|++||++.
T Consensus 43 ~~~~~~~~~~~-~~g~l~~~~~~~~~i~~~d~---~~~~~~~~~~~-------------~~~~~~~i~~~~dg~l~v~~~ 105 (333)
T 2dg1_A 43 KGLQLEGLNFD-RQGQLFLLDVFEGNIFKINP---ETKEIKRPFVS-------------HKANPAAIKIHKDGRLFVCYL 105 (333)
T ss_dssp SCCCEEEEEEC-TTSCEEEEETTTCEEEEECT---TTCCEEEEEEC-------------SSSSEEEEEECTTSCEEEEEC
T ss_pred cCccccCcEEC-CCCCEEEEECCCCEEEEEeC---CCCcEEEEeeC-------------CCCCcceEEECCCCcEEEEeC
Confidence 34579999996 57889999999999999974 35666554311 124789999999999999998
Q ss_pred CC----CEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC------CCeEEEEECCC
Q 024317 123 SN----HVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG------NQLIRQINLKP 190 (269)
Q Consensus 123 ~n----~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~------n~~I~~~~~~~ 190 (269)
.+ +.|.+++.++. ..+..... ....|++|+++++ |++||++.. +++|++++.++
T Consensus 106 ~~~~~~~~i~~~d~~~~~~~~~~~~~~-------------~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 106 GDFKSTGGIFAATENGDNLQDIIEDLS-------------TAYCIDDMVFDSK-GGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp TTSSSCCEEEEECTTSCSCEEEECSSS-------------SCCCEEEEEECTT-SCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred CCCCCCceEEEEeCCCCEEEEEEccCc-------------cCCcccceEECCC-CCEEEEeccccccCCCceEEEEeCCC
Confidence 76 79999998776 32322110 1357899999997 899999975 46899998776
Q ss_pred CeEEEecccCccCCCcccceeeeeccceeeEEEecCCc-EEEEcC-CCCccc
Q 024317 191 EDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIRH-TGRLDP 240 (269)
Q Consensus 191 ~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad~-~g~~~~ 240 (269)
........ .+..|.+++++++|+ +|+++. .+++..
T Consensus 172 ~~~~~~~~---------------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~ 208 (333)
T 2dg1_A 172 RTVTPIIQ---------------NISVANGIALSTDEKVLWVTETTANRLHR 208 (333)
T ss_dssp CCEEEEEE---------------EESSEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred CEEEEeec---------------CCCcccceEECCCCCEEEEEeCCCCeEEE
Confidence 44332211 124588999999995 999873 445543
No 66
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.29 E-value=5.6e-11 Score=104.84 Aligned_cols=169 Identities=18% Similarity=0.119 Sum_probs=107.6
Q ss_pred CCcceEEE---ecCCCeEEE-EeC------------CCCEEEEEecCCCCCccEEEEEcCCcccCCCC-Ccc-cccCCCC
Q 024317 45 INPHSVID---RPGSSDLIV-LDS------------SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDG-EPG-SARFDKP 106 (269)
Q Consensus 45 ~~P~giav---~~~~g~lyV-~D~------------~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg-~~~-~~~~~~P 106 (269)
..|.||.+ ++ .++||| +|. +.+.|.++|+..+.+|+....+.-.. ..++ +.. ...+..|
T Consensus 63 ~~~sGl~~~~~D~-~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~--~~~~~~~~~g~~~~~~ 139 (334)
T 2p9w_A 63 QQMSGLSLLTHDN-SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEK--VQDEFEKKAGKRPFGV 139 (334)
T ss_dssp EEEEEEEESSSSS-CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHH--HHHHHHHHHSSCCEEE
T ss_pred ceeeEEEEeccCC-CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcc--ccccccccccccccCC
Confidence 36799999 54 599998 552 46889999874334566555442100 0000 000 0023468
Q ss_pred ceEEEcCCCCEEEEeCCC-CEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEE
Q 024317 107 KSFAVDMKGNIYVADKSN-HVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIR 184 (269)
Q Consensus 107 ~giavd~~G~lyVaD~~n-~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~ 184 (269)
++|++|++|++||+|+.. ..|.+++++|+ ........+. ......|+||++.|++..|+|++. .++|.
T Consensus 140 nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~---------~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~ 209 (334)
T 2p9w_A 140 VQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGN---------GGQRPGYSGITFDPHSNKLIAFGG-PRALT 209 (334)
T ss_dssp EEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCC---------SSSCCSCSEEEEETTTTEEEEESS-SSSEE
T ss_pred ceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCC---------cccccCcceEEEeCCCCEEEEEcC-CCeEE
Confidence 999999999999999988 99999999998 3322211100 012456899999999778899998 99999
Q ss_pred EEECCCCeEEEecccCccCCCcccceeeeeccceeeE-EEecCCcE-EEEcC
Q 024317 185 QINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSL-VIGFVARP-YIIRH 234 (269)
Q Consensus 185 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gi-a~d~~g~l-yVad~ 234 (269)
+|+........+... ..|.. ..+..|.+| +...+|++ +|++.
T Consensus 210 ~fD~~~pv~~~v~~~--~~G~~------~~~~~~dgilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 210 AFDVSKPYAWPEPVK--INGDF------GTLSGTEKIVTVPVGNESVLVGAR 253 (334)
T ss_dssp EEECSSSSCCCEECE--ESSCC------CCCTTEEEEEEEEETTEEEEEEEE
T ss_pred EEcCCCCcceeeccc--ccCCc------ccccCcccccccccCCEEEEEEcC
Confidence 999873221001110 00100 034668885 77888866 88884
No 67
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.29 E-value=2.2e-10 Score=98.90 Aligned_cols=155 Identities=15% Similarity=0.072 Sum_probs=112.9
Q ss_pred cceEEEecCCCeEEEEeCC-CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSS-RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~-~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
..++.+. .+|+++|++.+ +++|+.+ +++|++....+... + ....+..|.+++++++|+++|++..++
T Consensus 79 ~~~~~~~-~dG~~lv~~~~~~~~v~~v----d~~Gk~l~~~~~~~-----~--~~~~~~~~~~v~~~~~G~~lv~~~~~~ 146 (276)
T 3no2_A 79 MQTARIL-PDGNALVAWCGHPSTILEV----NMKGEVLSKTEFET-----G--IERPHAQFRQINKNKKGNYLVPLFATS 146 (276)
T ss_dssp EEEEEEC-TTSCEEEEEESTTEEEEEE----CTTSCEEEEEEECC-----S--CSSGGGSCSCCEECTTSCEEEEETTTT
T ss_pred ccccEEC-CCCCEEEEecCCCCEEEEE----eCCCCEEEEEeccC-----C--CCcccccccCceECCCCCEEEEecCCC
Confidence 3456664 58899999987 8899988 56787655443210 0 112345688899999999999999999
Q ss_pred EEEEEeCCcceEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC-CCeEEEecccCccCC
Q 024317 126 VIRKITNLGVTTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK-PEDCSKSSQSGSALG 204 (269)
Q Consensus 126 ~I~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~-~~~~~~~~~~g~~~g 204 (269)
+|..+|++|+..+.-.. -..|.++++.++ |+++|++..+++|..|+++ |+.+-.+...... +
T Consensus 147 ~v~~~d~~G~~~w~~~~---------------~~~~~~~~~~~~-g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~-~ 209 (276)
T 3no2_A 147 EVREIAPNGQLLNSVKL---------------SGTPFSSAFLDN-GDCLVACGDAHCFVQLNLESNRIVRRVNANDIE-G 209 (276)
T ss_dssp EEEEECTTSCEEEEEEC---------------SSCCCEEEECTT-SCEEEECBTTSEEEEECTTTCCEEEEEEGGGSB-S
T ss_pred EEEEECCCCCEEEEEEC---------------CCCccceeEcCC-CCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCC-C
Confidence 99999999982222110 135778888876 8999999999999999999 7777666533111 1
Q ss_pred CcccceeeeeccceeeEEEecCCcEEEEcCCCCc
Q 024317 205 AVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRL 238 (269)
Q Consensus 205 ~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~ 238 (269)
..+..|.++++.++|++||+++.|..
T Consensus 210 --------~~l~~~~~~~~~~~G~i~v~~~~g~~ 235 (276)
T 3no2_A 210 --------VQLFFVAQLFPLQNGGLYICNWQGHD 235 (276)
T ss_dssp --------CCCSEEEEEEECTTSCEEEEEECTTC
T ss_pred --------ccccccccceEcCCCCEEEEeccCcc
Confidence 13467999999999999999976543
No 68
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.26 E-value=1e-09 Score=96.26 Aligned_cols=174 Identities=7% Similarity=-0.010 Sum_probs=111.3
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
....|.+|++++++..||+++...+.|..+++ +.+|....+......+. +.........|.+++++++|++|+++.
T Consensus 84 ~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~--~~~g~~~~~~~~~~~~~--~p~~~~~~~~~~~~~~spdg~l~v~~~ 159 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQLVYSANYHKGTAEVMKI--AADGALTLTDTVQHSGH--GPRPEQDGSHIHYTDLTPDNRLAVIDL 159 (347)
T ss_dssp ESCCCSEEEEETTTTEEEEEETTTTEEEEEEE--CTTSCEEEEEEEECCCC--CSSTTCSSCCEEEEEECTTSCEEEEET
T ss_pred CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe--CCCCCeeecceeecCCC--CCCccccCCCceEEEECCCCcEEEEeC
Confidence 35689999998766679999988899999987 34565544322110000 000112345788999999999999999
Q ss_pred CCCEEEEEeCC--cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCC--CeEEEec
Q 024317 123 SNHVIRKITNL--GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKP--EDCSKSS 197 (269)
Q Consensus 123 ~n~~I~~~~~~--g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~--~~~~~~~ 197 (269)
..++|++++.+ |. ........ ..-..|.+++++|++..||+++..+++|+.++.+. +......
T Consensus 160 ~~~~v~~~~~~~~g~~~~~~~~~~------------~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 160 GSDKVYVYNVSDAGQLSEQSVLTM------------EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEEC------------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEEECCCCcEEEeeeEEc------------CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEee
Confidence 99999988854 54 32221100 00236889999999666999999999988887663 3322211
Q ss_pred cc-CccCCCcccceeeeeccceeeEEEecCCc-EEEEcC-CCCcc
Q 024317 198 QS-GSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIRH-TGRLD 239 (269)
Q Consensus 198 ~~-g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad~-~g~~~ 239 (269)
.. ..+.+.. ....|.+++++++|+ ||+++. .+.+.
T Consensus 228 ~~~~~~~~~~-------~~~~~~~i~~spdG~~l~v~~~~~~~v~ 265 (347)
T 3hfq_A 228 IVKTIPADYT-------AHNGAAAIRLSHDGHFLYVSNRGYNTLA 265 (347)
T ss_dssp EEESSCTTCC-------SCCEEEEEEECTTSCEEEEEEETTTEEE
T ss_pred eeeecCCCCC-------CCCcceeEEECCCCCEEEEEeCCCCEEE
Confidence 11 0011100 114588999999995 888874 44443
No 69
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.24 E-value=1.9e-09 Score=92.22 Aligned_cols=173 Identities=14% Similarity=0.166 Sum_probs=112.6
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEE--EEEcCCcccCCCCCcccccCCCCceEEEcCCC-CEEEE
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVK--RLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG-NIYVA 120 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~--~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G-~lyVa 120 (269)
+..|+||++. .++.+||++..+++++.++. ..++.+. .....+ ... ...=....|||+|+++ .||++
T Consensus 69 ~~D~EGIa~~-~~g~~~vs~E~~~~l~~~~v--~~~~~i~~~~~~~~~---~~~----~~~N~g~EGLA~d~~~~~L~va 138 (255)
T 3qqz_A 69 VKDLETIEYI-GDNQFVISDERDYAIYVISL--TPNSEVKILKKIKIP---LQE----SPTNCGFEGLAYSRQDHTFWFF 138 (255)
T ss_dssp CSSEEEEEEC-STTEEEEEETTTTEEEEEEE--CTTCCEEEEEEEECC---CSS----CCCSSCCEEEEEETTTTEEEEE
T ss_pred CCChHHeEEe-CCCEEEEEECCCCcEEEEEc--CCCCeeeeeeeeccc---ccc----ccccCCcceEEEeCCCCEEEEE
Confidence 4689999995 57889999999999999876 3455432 222111 000 0001124899999977 59998
Q ss_pred eCCCC-EEEEEe--CCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEe
Q 024317 121 DKSNH-VIRKIT--NLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKS 196 (269)
Q Consensus 121 D~~n~-~I~~~~--~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~ 196 (269)
.-... +|+.++ ..+. .++..... ......+..|++|+++|..++|||....+++|..++..+..+...
T Consensus 139 ~E~~p~~i~~~~g~~~~~~l~i~~~~~--------~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~ 210 (255)
T 3qqz_A 139 KEKNPIEVYKVNGLLSSNELHISKDKA--------LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEM 210 (255)
T ss_dssp EESSSEEEEEEESTTCSSCCEEEECHH--------HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEE
T ss_pred ECcCCceEEEEcccccCCceeeecchh--------hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEE
Confidence 86544 788887 1222 22221100 000012456899999999999999999999999999999866554
Q ss_pred cccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCccc
Q 024317 197 SQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRLDP 240 (269)
Q Consensus 197 ~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~~~ 240 (269)
.-.....+ + .-.+..|.|||+|++|+|||+...+.++.
T Consensus 211 ~L~~g~~~---l---~~~~~qpEGia~d~~G~lyIvsE~n~~y~ 248 (255)
T 3qqz_A 211 SLTKGSRG---L---SHNIKQAEGVAMDASGNIYIVSEPNRFYR 248 (255)
T ss_dssp ECSTTGGG---C---SSCCCSEEEEEECTTCCEEEEETTTEEEE
T ss_pred EcCCccCC---c---ccccCCCCeeEECCCCCEEEEcCCceEEE
Confidence 32210001 0 01346799999999999999986665543
No 70
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.22 E-value=1.1e-09 Score=96.35 Aligned_cols=153 Identities=12% Similarity=0.108 Sum_probs=105.4
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCC-
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS- 123 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~- 123 (269)
..|.++++++ +|++||+. .+.|+++|. .+|++..+.... .....+.|+++++|++|++||++..
T Consensus 90 ~~v~~i~~~~-dg~l~v~~--~~gl~~~d~---~~g~~~~~~~~~---------~~~~~~~~~~i~~d~~G~l~v~~~~~ 154 (326)
T 2ghs_A 90 FMGSALAKIS-DSKQLIAS--DDGLFLRDT---ATGVLTLHAELE---------SDLPGNRSNDGRMHPSGALWIGTMGR 154 (326)
T ss_dssp SCEEEEEEEE-TTEEEEEE--TTEEEEEET---TTCCEEEEECSS---------TTCTTEEEEEEEECTTSCEEEEEEET
T ss_pred CcceEEEEeC-CCeEEEEE--CCCEEEEEC---CCCcEEEEeeCC---------CCCCCCCCCCEEECCCCCEEEEeCCC
Confidence 3578888864 78899987 456999974 467766554221 0012457899999999999999863
Q ss_pred -----CCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC--CC-eE-
Q 024317 124 -----NHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK--PE-DC- 193 (269)
Q Consensus 124 -----n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~--~~-~~- 193 (269)
...|++++ +|. ..+.. .+..|+++++++++..||++|..+++|++++.+ .+ ..
T Consensus 155 ~~~~~~~~l~~~~-~g~~~~~~~----------------~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~ 217 (326)
T 2ghs_A 155 KAETGAGSIYHVA-KGKVTKLFA----------------DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG 217 (326)
T ss_dssp TCCTTCEEEEEEE-TTEEEEEEE----------------EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS
T ss_pred cCCCCceEEEEEe-CCcEEEeeC----------------CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCccc
Confidence 46899999 776 44432 145689999999866899999999999999975 22 11
Q ss_pred --EEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCcccc
Q 024317 194 --SKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLDPP 241 (269)
Q Consensus 194 --~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~~~ 241 (269)
..+... . . ....|.++++|++|++||+.. .+++...
T Consensus 218 ~~~~~~~~--~-~---------~~~~p~gi~~d~~G~lwva~~~~~~v~~~ 256 (326)
T 2ghs_A 218 KAEVFIDS--T-G---------IKGGMDGSVCDAEGHIWNARWGEGAVDRY 256 (326)
T ss_dssp CCEEEEEC--T-T---------SSSEEEEEEECTTSCEEEEEETTTEEEEE
T ss_pred CceEEEEC--C-C---------CCCCCCeeEECCCCCEEEEEeCCCEEEEE
Confidence 001000 0 0 114589999999999999984 3445433
No 71
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.19 E-value=8.8e-10 Score=98.71 Aligned_cols=161 Identities=7% Similarity=0.016 Sum_probs=104.2
Q ss_pred CCCcceEEEecCCCeEEEEe------------CCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEE
Q 024317 44 EINPHSVIDRPGSSDLIVLD------------SSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAV 111 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D------------~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giav 111 (269)
...|++|++.+ +|.+|++. ...++|+++|+. +++++...+.-.+. .+.... -.|.||.+
T Consensus 49 ~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~-~~~~~~~~l~~~g~------~~~~~~-f~PhGi~~ 119 (355)
T 3sre_A 49 DNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLN-EKEPAVSELEIIGN------TLDISS-FNPHGIST 119 (355)
T ss_dssp CSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETT-SSSCCEEECEEECS------SCCGGG-CCEEEEEE
T ss_pred CCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecC-CCCCceEEEEccCC------CCCcCc-eeeeeeEE
Confidence 35799999965 89999996 247889999864 23455444321110 011112 38999999
Q ss_pred cC--CC--CEEEEeCC--CCE--EEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEEC----
Q 024317 112 DM--KG--NIYVADKS--NHV--IRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDH---- 178 (269)
Q Consensus 112 d~--~G--~lyVaD~~--n~~--I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~---- 178 (269)
.. +| +|||+|.. +.+ |.++++++. .++...-. ...++.||+++++++ |.+||++.
T Consensus 120 ~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~-----------g~~~~~pND~~v~~~-G~fyvt~~~~ft 187 (355)
T 3sre_A 120 FIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR-----------HKLLPSVNDIVAVGP-EHFYATNDHYFI 187 (355)
T ss_dssp EECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC-----------CTTCSSEEEEEEEET-TEEEEEESCSCS
T ss_pred EECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc-----------cCCCCCCceEEEeCC-CCEEecCCcEeC
Confidence 65 45 49999976 445 556677765 43333211 023889999999997 99999976
Q ss_pred -------------CCCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCC-cEEEEcC-CCCccccc
Q 024317 179 -------------GNQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRH-TGRLDPPL 242 (269)
Q Consensus 179 -------------~n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~-~g~~~~~~ 242 (269)
..++|+++++. ..... . ..+..|+|||++++| .+||+|. .++++...
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~~-~~~~~--------------~--~~l~~pNGia~spDg~~lYvadt~~~~I~~~~ 249 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSPN-DVRVV--------------A--EGFDFANGINISPDGKYVYIAELLAHKIHVYE 249 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECTT-CCEEE--------------E--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred CcccccchhhccCCccEEEEEECC-eEEEe--------------e--cCCcccCcceECCCCCEEEEEeCCCCeEEEEE
Confidence 24567777652 11111 1 135789999999999 8999994 55665544
No 72
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.19 E-value=7.2e-10 Score=99.27 Aligned_cols=164 Identities=14% Similarity=0.050 Sum_probs=100.1
Q ss_pred CCCcceEEEecCCCeEEEEeCC-------------CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEE
Q 024317 44 EINPHSVIDRPGSSDLIVLDSS-------------RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFA 110 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~-------------~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~gia 110 (269)
...|.+|++++ +|.|||++.. +++|++++ .+|++- .++ .+.........+..|.+|+
T Consensus 134 ~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~----~dG~~p----~~n-pf~~~~i~a~G~rnp~Gla 203 (354)
T 3a9g_A 134 IHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVD----EEGRPP----ADN-PFPNSPIWSYGHRNPQGID 203 (354)
T ss_dssp SCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEEC----TTSCCC----TTS-SSTTCCEEEECCSCCCEEE
T ss_pred CcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEc----CCCCCC----CCC-CCCCCcEEEEccCCcceEE
Confidence 45789999975 8899999643 35788884 444310 000 0001111123478999999
Q ss_pred EcC-CCCEEEEeCCCCE---EEEEeCCcc---eEEecCCCCCCCCCCCc-cccc----cccCceEEEE-------eCCCC
Q 024317 111 VDM-KGNIYVADKSNHV---IRKITNLGV---TTIAGGGSKKEGRADGP-AQNA----SFSNDFELTF-------VPHIC 171 (269)
Q Consensus 111 vd~-~G~lyVaD~~n~~---I~~~~~~g~---~~~~g~~~~~~~~~~~~-~~~~----~l~~P~gia~-------~~~~g 171 (269)
+|+ +|+||++|.+.++ |.++.+.+. ....+... ..+. .... .-..|.|+++ ..+ |
T Consensus 204 ~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~-----~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~-G 277 (354)
T 3a9g_A 204 WHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAG-----RGEFVDPVIDTGSETWAPSGASFVHGDMFPGLR-G 277 (354)
T ss_dssp ECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCC-----CTTSCCCSEECTTCCCCEEEEEECCSSSCGGGT-T
T ss_pred EeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCC-----CCCCcCCEeecCCCCcCCcceEEECCCCCcccC-C
Confidence 999 8999999988654 555554221 11111000 0000 0001 1246999998 344 8
Q ss_pred EEEEEECCCCeEEEEECCCCe-EEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC
Q 024317 172 ALLISDHGNQLIRQINLKPED-CSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH 234 (269)
Q Consensus 172 ~LyVaD~~n~~I~~~~~~~~~-~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~ 234 (269)
.|||+|..+++|++++.++.. ....... ..+ ...+|.+|+++++|.|||++.
T Consensus 278 ~l~v~~~~~~~v~~~~~~~~g~~~~~~~~--~~~---------~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 278 WLLIACLRGSMLAAVNFGDNMEVRKISTF--FKN---------VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEEETTTTEEEEEEECGGGCEEEEEEE--CTT---------TSCCEEEEEECTTSCEEEEEC
T ss_pred cEEEEEcCCCEEEEEEECCCCcccceeee--ccC---------CCCCeeEEEECCCCcEEEEEe
Confidence 999999999999999987532 2111000 001 136799999999999999985
No 73
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.15 E-value=1.7e-08 Score=87.86 Aligned_cols=148 Identities=9% Similarity=0.066 Sum_probs=107.4
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~ 123 (269)
..|.++++++++..+|+++. ++.|+.+|+ .+++.......+.. ..-..|.+++++++|+ +|+++..
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~---~~~~~~~~~~~~~~---------~~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNA-DGELITIDT---ADNKILSRKKLLDD---------GKEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp TTCCCCEEETTTTEEEEECT-TSEEEEEET---TTTEEEEEEECCCS---------SSCCCEEEEEEETTTTEEEEEESS
T ss_pred CccceEEECCCCCEEEEEcC-CCeEEEEEC---CCCeEEEEEEcCCC---------CCCcccceEEECCCCCEEEEEeCC
Confidence 35999999887778999986 678999985 46665544322110 1133678899999988 9999998
Q ss_pred CCEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCc
Q 024317 124 NHVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGS 201 (269)
Q Consensus 124 n~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~ 201 (269)
.+.|.+++.. ++ ..... ...|.+++++++++.|||++..++.|..++............
T Consensus 252 ~~~v~~~d~~~~~~~~~~~-----------------~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~-- 312 (353)
T 3vgz_A 252 AAEVLVVDTRNGNILAKVA-----------------APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT-- 312 (353)
T ss_dssp SSEEEEEETTTCCEEEEEE-----------------CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC--
T ss_pred CCEEEEEECCCCcEEEEEE-----------------cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec--
Confidence 8999999974 33 22221 234578999999777999999999999999876654432211
Q ss_pred cCCCcccceeeeeccceeeEEEecCCc-EEEEcCCCC
Q 024317 202 ALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIRHTGR 237 (269)
Q Consensus 202 ~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad~~g~ 237 (269)
-..|.+++++++|+ +||+...+.
T Consensus 313 -------------~~~~~~~~~s~dg~~l~v~~~~~~ 336 (353)
T 3vgz_A 313 -------------PTHPNSLALSADGKTLYVSVKQKS 336 (353)
T ss_dssp -------------CSEEEEEEECTTSCEEEEEEECCC
T ss_pred -------------CCCCCeEEEcCCCCEEEEEEcccc
Confidence 13589999999996 999986543
No 74
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.14 E-value=2.9e-09 Score=93.34 Aligned_cols=163 Identities=10% Similarity=0.087 Sum_probs=106.2
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~ 123 (269)
..|.+++++| +|++|+++...++|+.+++ ..+|++....... ...-..|.+++++++|+ +|+++..
T Consensus 141 ~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~--~~~g~~~~~~~~~----------~~~g~~p~~~~~spdg~~l~v~~~~ 207 (347)
T 3hfq_A 141 SHIHYTDLTP-DNRLAVIDLGSDKVYVYNV--SDAGQLSEQSVLT----------MEAGFGPRHLVFSPDGQYAFLAGEL 207 (347)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEEEE--CTTSCEEEEEEEE----------CCTTCCEEEEEECTTSSEEEEEETT
T ss_pred CCceEEEECC-CCcEEEEeCCCCEEEEEEE--CCCCcEEEeeeEE----------cCCCCCCceEEECCCCCEEEEEeCC
Confidence 3577899986 5559999999999999987 3467655432110 00113688999999998 9999998
Q ss_pred CCEEEEEeCC---cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC-eEEEecc
Q 024317 124 NHVIRKITNL---GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE-DCSKSSQ 198 (269)
Q Consensus 124 n~~I~~~~~~---g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~-~~~~~~~ 198 (269)
.++|.+++.+ |. ..+......... ......|.+++++|++..|||++..+++|..++.+.. .......
T Consensus 208 ~~~v~v~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~ 280 (347)
T 3hfq_A 208 SSQIASLKYDTQTGAFTQLGIVKTIPAD-------YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ 280 (347)
T ss_dssp TTEEEEEEEETTTTEEEEEEEEESSCTT-------CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred CCEEEEEEecCCCCceEEeeeeeecCCC-------CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence 8998888744 44 222111100000 0112468999999996679999998899999987522 1111111
Q ss_pred cCccCCCcccceeeeeccceeeEEEecCCc-EEEEcCC-CCcc
Q 024317 199 SGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIRHT-GRLD 239 (269)
Q Consensus 199 ~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad~~-g~~~ 239 (269)
. .. .-..|.+++++++|+ ||+++.. +.+.
T Consensus 281 ~--~~----------~~~~~~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 281 I--ST----------EGDFPRDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp E--EC----------SSSCCCEEEECTTSSEEEEEETTTTEEE
T ss_pred E--ec----------CCCCcCeEEECCCCCEEEEEEcCCCcEE
Confidence 1 00 014588999999995 8999854 4443
No 75
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.10 E-value=1.6e-08 Score=86.97 Aligned_cols=156 Identities=8% Similarity=-0.025 Sum_probs=101.8
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCC-CEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG-NIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G-~lyVaD~~n 124 (269)
++.|++++ ++++|++++..+++.++|. .++++...+..+ .|.|+.+.++| .+|++| +.
T Consensus 67 fgeGi~~~--g~~lyv~t~~~~~v~viD~---~t~~v~~~i~~g---------------~~~g~glt~Dg~~l~vs~-gs 125 (266)
T 2iwa_A 67 FGEGLTLL--NEKLYQVVWLKNIGFIYDR---RTLSNIKNFTHQ---------------MKDGWGLATDGKILYGSD-GT 125 (266)
T ss_dssp CEEEEEEE--TTEEEEEETTCSEEEEEET---TTTEEEEEEECC---------------SSSCCEEEECSSSEEEEC-SS
T ss_pred ceEEEEEe--CCEEEEEEecCCEEEEEEC---CCCcEEEEEECC---------------CCCeEEEEECCCEEEEEC-CC
Confidence 56678883 6899999999999999984 455544433211 23444454455 499999 68
Q ss_pred CEEEEEeCCcc---eEE-ecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEeccc-
Q 024317 125 HVIRKITNLGV---TTI-AGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQS- 199 (269)
Q Consensus 125 ~~I~~~~~~g~---~~~-~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~- 199 (269)
++|.++|+... .++ .+... ..+..|+++.+. + +.||++....+.|.+|++....+...-..
T Consensus 126 ~~l~viD~~t~~v~~~I~Vg~~~------------~p~~~~nele~~-d-g~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 126 SILYEIDPHTFKLIKKHNVKYNG------------HRVIRLNELEYI-N-GEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp SEEEEECTTTCCEEEEEECEETT------------EECCCEEEEEEE-T-TEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred CeEEEEECCCCcEEEEEEECCCC------------cccccceeEEEE-C-CEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 89999998763 222 22110 115578999987 4 79999999999999999987655443222
Q ss_pred CccCCCcccceeeeeccceeeEEEecCC-cEEEEc-CCCCc
Q 024317 200 GSALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIR-HTGRL 238 (269)
Q Consensus 200 g~~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad-~~g~~ 238 (269)
+..... ..........|.|||+++++ ++||+. ..+.+
T Consensus 192 g~~~~~--~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v 230 (266)
T 2iwa_A 192 NLRKKL--IDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKL 230 (266)
T ss_dssp HHHHHH--HHTTCTTCCCEEEEEEETTTTEEEEEETTCSEE
T ss_pred Cccccc--ccccccccCceEEEEEcCCCCEEEEECCCCCeE
Confidence 100000 00000012568999999998 899998 34444
No 76
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.09 E-value=1.3e-08 Score=89.75 Aligned_cols=163 Identities=11% Similarity=0.098 Sum_probs=104.2
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCc----c-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEE
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEES----V-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYV 119 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g----~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyV 119 (269)
+|++++++|++..+|+++.+.++|..++++ ...+ + +......... ....-..|.+++++++|. +|+
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~-~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~spdg~~l~v 227 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNIN-PNANADNKEKFLTKGTPEAF-------KVAPGSGPRHLIFNSDGKFAYL 227 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEC-TTCCTTTCCCCEEEEEEEEE-------ECCTTCCEEEEEECTTSSEEEE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEc-CCCCcccccceeecccccce-------ecCCCCCCeEEEEcCCCCEEEE
Confidence 457899987556799999999999988764 2222 2 2111000000 001124688999999997 999
Q ss_pred EeCCCCEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-CCeEEEEECC--CCeEE
Q 024317 120 ADKSNHVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-NQLIRQINLK--PEDCS 194 (269)
Q Consensus 120 aD~~n~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-n~~I~~~~~~--~~~~~ 194 (269)
++...++|.+++.+ |. ..+...... ...+..|.+|+++|++..||+++.. .++|..|+.+ .+...
T Consensus 228 ~~~~~~~v~v~~~~~g~~~~~~~~~~~----------~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~ 297 (361)
T 3scy_A 228 INEIGGTVIAFRYADGMLDEIQTVAAD----------TVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLT 297 (361)
T ss_dssp EETTTCEEEEEEEETTEEEEEEEEESC----------SSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEE
T ss_pred EcCCCCeEEEEEecCCceEEeEEEecC----------CCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEE
Confidence 99888999998853 43 222211100 1124568899999997789999998 8888888765 22222
Q ss_pred EecccCccCCCcccceeeeeccceeeEEEecCCc-EEEEc-CCCCcc
Q 024317 195 KSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIR-HTGRLD 239 (269)
Q Consensus 195 ~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad-~~g~~~ 239 (269)
..... ..+ ..|.+++++++|+ ||+++ ..+.+.
T Consensus 298 ~~~~~--~~g-----------~~~~~~~~spdg~~l~~~~~~~~~v~ 331 (361)
T 3scy_A 298 KVGYQ--LTG-----------IHPRNFIITPNGKYLLVACRDTNVIQ 331 (361)
T ss_dssp EEEEE--ECS-----------SCCCEEEECTTSCEEEEEETTTTEEE
T ss_pred EeeEe--cCC-----------CCCceEEECCCCCEEEEEECCCCCEE
Confidence 21111 001 4588999999995 89988 344443
No 77
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.08 E-value=1.6e-09 Score=96.85 Aligned_cols=177 Identities=11% Similarity=0.066 Sum_probs=104.4
Q ss_pred CCCcceEEEecCCCeEEEEeCC-------------CCEEEEEecCCCCCccEEEEEcCCcccCCC----CCcccccCCCC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSS-------------RSAFYTLSFPLSEESVVKRLAGDGVQGYSD----GEPGSARFDKP 106 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~-------------~~~I~~~dl~~~~~g~~~~~~g~g~~g~~d----g~~~~~~~~~P 106 (269)
..+|.+|++++ +|.|||+... .++|++++ .+|++- .+++-... .......+..|
T Consensus 129 ~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~----~dG~~p----~~npf~~~~~~~~~i~a~G~rnp 199 (353)
T 2g8s_A 129 NHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLT----DQGEIP----DDNPFIKESGVRAEIWSYGIRNP 199 (353)
T ss_dssp SCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEE----TTSCCC----TTCTTTTSTTSCTTEEEECCSEE
T ss_pred cccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEEC----CCCCCC----CCCCCcCCCCCCccEEEEcCcCc
Confidence 34688999975 7899999743 35788885 344310 11110000 11123457889
Q ss_pred ceEEEcC-CCCEEEEeCCCC---EEEEEeCCcce---EEecCCCC---CCC-----CCCCccc-cc---cccCceEEEEe
Q 024317 107 KSFAVDM-KGNIYVADKSNH---VIRKITNLGVT---TIAGGGSK---KEG-----RADGPAQ-NA---SFSNDFELTFV 167 (269)
Q Consensus 107 ~giavd~-~G~lyVaD~~n~---~I~~~~~~g~~---~~~g~~~~---~~~-----~~~~~~~-~~---~l~~P~gia~~ 167 (269)
.++++|+ +|+||++|.+.+ +|.++.+.+.. .+.+.... .+. ...+... .. .-..|.|+++.
T Consensus 200 ~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y 279 (353)
T 2g8s_A 200 QGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFY 279 (353)
T ss_dssp EEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEE
T ss_pred cceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEE
Confidence 9999999 899999998753 56666543321 11110000 000 0000000 00 01368999997
Q ss_pred CC------CCEEEEEECCCCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEE-c-CCCCcc
Q 024317 168 PH------ICALLISDHGNQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYII-R-HTGRLD 239 (269)
Q Consensus 168 ~~------~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVa-d-~~g~~~ 239 (269)
.. +|.+||+|..+++|++++.++......... ..+ ...+|.+|+++++|.|||+ | .+|+++
T Consensus 280 ~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~----------~~~-~~~rp~~v~~~pdG~lyv~td~~~g~I~ 348 (353)
T 2g8s_A 280 NSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRI----------LTD-RGQRIRDVRTGPDGYLYVLTDESSGELL 348 (353)
T ss_dssp CCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEE----------SGG-GCCCEEEEEECTTSCEEEEECSTTEEEE
T ss_pred CCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEc----------ccC-CCCceeEEEECCCCcEEEEEeCCCCEEE
Confidence 42 389999999999999999876532211100 001 2368999999999999997 5 456655
Q ss_pred c
Q 024317 240 P 240 (269)
Q Consensus 240 ~ 240 (269)
+
T Consensus 349 r 349 (353)
T 2g8s_A 349 K 349 (353)
T ss_dssp E
T ss_pred E
Confidence 3
No 78
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.08 E-value=3.1e-08 Score=83.91 Aligned_cols=167 Identities=16% Similarity=0.130 Sum_probs=106.7
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
..|+++ .+++||++++.+++++++|. .+.++...+..+ ..+.|++-| .+.||++|. .++
T Consensus 67 geGi~~--~~~~ly~ltw~~~~v~v~D~---~tl~~~~ti~~~--------------~~Gwglt~d-g~~L~vSdg-s~~ 125 (243)
T 3mbr_X 67 GAGIVA--WRDRLIQLTWRNHEGFVYDL---ATLTPRARFRYP--------------GEGWALTSD-DSHLYMSDG-TAV 125 (243)
T ss_dssp EEEEEE--ETTEEEEEESSSSEEEEEET---TTTEEEEEEECS--------------SCCCEEEEC-SSCEEEECS-SSE
T ss_pred eeEEEE--eCCEEEEEEeeCCEEEEEEC---CcCcEEEEEeCC--------------CCceEEeeC-CCEEEEECC-CCe
Confidence 466777 47999999999999999984 455544433221 134567654 456999995 889
Q ss_pred EEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEeccc-Ccc
Q 024317 127 IRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQS-GSA 202 (269)
Q Consensus 127 I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~-g~~ 202 (269)
|.++|+... .++.-. ..+ ..+..++.|... +|.||+.....+.|.+|++..+.+...-.- +..
T Consensus 126 l~~iDp~t~~~~~~I~V~-~~g----------~~~~~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~ 192 (243)
T 3mbr_X 126 IRKLDPDTLQQVGSIKVT-AGG----------RPLDNLNELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQALV 192 (243)
T ss_dssp EEEECTTTCCEEEEEECE-ETT----------EECCCEEEEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGS
T ss_pred EEEEeCCCCeEEEEEEEc-cCC----------cccccceeeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCc
Confidence 999998753 222111 000 124567788765 389999999999999999988766554322 111
Q ss_pred CCCcccceeeeeccceeeEEEecCC-cEEEEcCCCCccccc-ccccccccCC
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRHTGRLDPPL-QHDMEALPNQ 252 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~~g~~~~~~-~~~~~~~~~~ 252 (269)
..... ........|+|||.|+++ ++||+- ..|... +..+...|.+
T Consensus 193 ~~~~~--~~~~~~~vlNGIA~d~~~~~lfVTG---K~wp~~~~v~~~~~~~~ 239 (243)
T 3mbr_X 193 PDADA--LTDSTNDVLNGIAFDAEHDRLFVTG---KRWPMLYEIRLTPLPHA 239 (243)
T ss_dssp TTTTS--CCCTTSSCEEEEEEETTTTEEEEEE---TTCSEEEEEEECCCCC-
T ss_pred ccccc--ccCCcCCceEEEEEcCCCCEEEEEC---CCCCcEEEEEEecCCcc
Confidence 11000 000122579999999976 999985 466666 5555544443
No 79
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.06 E-value=2e-08 Score=85.79 Aligned_cols=160 Identities=13% Similarity=0.115 Sum_probs=103.6
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
..||++ .+++||++++.+++++++|. .+.++...+..+ ..+.+++.| .+.||++|. .++
T Consensus 89 geGit~--~g~~ly~ltw~~~~v~v~D~---~t~~~~~ti~~~--------------~eG~glt~d-g~~L~~SdG-s~~ 147 (262)
T 3nol_A 89 GEGISD--WKDKIVGLTWKNGLGFVWNI---RNLRQVRSFNYD--------------GEGWGLTHN-DQYLIMSDG-TPV 147 (262)
T ss_dssp EEEEEE--ETTEEEEEESSSSEEEEEET---TTCCEEEEEECS--------------SCCCCEEEC-SSCEEECCS-SSE
T ss_pred eeEEEE--eCCEEEEEEeeCCEEEEEEC---ccCcEEEEEECC--------------CCceEEecC-CCEEEEECC-CCe
Confidence 366777 47899999999999999985 455544433211 133566654 356999995 789
Q ss_pred EEEEeCCcc---eEEec-CCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEeccc-Cc
Q 024317 127 IRKITNLGV---TTIAG-GGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQS-GS 201 (269)
Q Consensus 127 I~~~~~~g~---~~~~g-~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~-g~ 201 (269)
|+++|+... .++.- ... ..+..++.+... + |.||+.....+.|.+|++..+.+...-.. +.
T Consensus 148 i~~iDp~T~~v~~~I~V~~~g------------~~~~~lNELe~~-~-G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L 213 (262)
T 3nol_A 148 LRFLDPESLTPVRTITVTAHG------------EELPELNELEWV-D-GEIFANVWQTNKIVRIDPETGKVTGIIDLNGI 213 (262)
T ss_dssp EEEECTTTCSEEEEEECEETT------------EECCCEEEEEEE-T-TEEEEEETTSSEEEEECTTTCBEEEEEECTTG
T ss_pred EEEEcCCCCeEEEEEEeccCC------------ccccccceeEEE-C-CEEEEEEccCCeEEEEECCCCcEEEEEECCcC
Confidence 999998743 23211 110 125667888876 4 89999999999999999988766544322 11
Q ss_pred cCCCcccceeeeeccceeeEEEecCC-cEEEEcCCCCccccc-ccccc
Q 024317 202 ALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRHTGRLDPPL-QHDME 247 (269)
Q Consensus 202 ~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~~g~~~~~~-~~~~~ 247 (269)
...... .......|+|||.|+++ ++||+. ..|... +..+.
T Consensus 214 ~~~~~~---~~~~~~vlNGIA~dp~~~~lfVTG---K~Wp~~~ev~~~ 255 (262)
T 3nol_A 214 LAEAGP---LPSPIDVLNGIAWDKEHHRLFVTG---KLWPKVFEITLT 255 (262)
T ss_dssp GGGSCS---CCSSCCCEEEEEEETTTTEEEEEE---TTCSEEEEEEEE
T ss_pred cccccc---ccCcCCceEEEEEcCCCCEEEEEC---CCCCceEEEEEe
Confidence 100000 00123579999999976 899985 356555 44443
No 80
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.06 E-value=1.9e-08 Score=86.68 Aligned_cols=144 Identities=9% Similarity=-0.058 Sum_probs=103.2
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCC-
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS- 123 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~- 123 (269)
..|+++++.+ +|++|++ .+++|+.+| ++|++......+. -....++.+.++|+++|++..
T Consensus 37 ~~~~~~~~~p-dG~ilvs--~~~~V~~~d----~~G~~~W~~~~~~------------~~~~~~~~~~~dG~~lv~~~~~ 97 (276)
T 3no2_A 37 WECNSVAATK-AGEILFS--YSKGAKMIT----RDGRELWNIAAPA------------GCEMQTARILPDGNALVAWCGH 97 (276)
T ss_dssp CCCCEEEECT-TSCEEEE--CBSEEEEEC----TTSCEEEEEECCT------------TCEEEEEEECTTSCEEEEEEST
T ss_pred CCCcCeEECC-CCCEEEe--CCCCEEEEC----CCCCEEEEEcCCC------------CccccccEECCCCCEEEEecCC
Confidence 3689999975 8899995 478899994 5787666543210 012356788899999999988
Q ss_pred CCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCc
Q 024317 124 NHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGS 201 (269)
Q Consensus 124 n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~ 201 (269)
+++|..++++|+ ..+.-.. .. ...+..|.+++++++ |+++|++..+++|..|+++|+.+..+...
T Consensus 98 ~~~v~~vd~~Gk~l~~~~~~~-~~---------~~~~~~~~~v~~~~~-G~~lv~~~~~~~v~~~d~~G~~~w~~~~~-- 164 (276)
T 3no2_A 98 PSTILEVNMKGEVLSKTEFET-GI---------ERPHAQFRQINKNKK-GNYLVPLFATSEVREIAPNGQLLNSVKLS-- 164 (276)
T ss_dssp TEEEEEECTTSCEEEEEEECC-SC---------SSGGGSCSCCEECTT-SCEEEEETTTTEEEEECTTSCEEEEEECS--
T ss_pred CCEEEEEeCCCCEEEEEeccC-CC---------CcccccccCceECCC-CCEEEEecCCCEEEEECCCCCEEEEEECC--
Confidence 899999999998 3332111 00 112456788888887 88999999999999999998877665433
Q ss_pred cCCCcccceeeeeccceeeEEEecCCcEEEEcC
Q 024317 202 ALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH 234 (269)
Q Consensus 202 ~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~ 234 (269)
..|.++++.++|+++|++.
T Consensus 165 --------------~~~~~~~~~~~g~~~v~~~ 183 (276)
T 3no2_A 165 --------------GTPFSSAFLDNGDCLVACG 183 (276)
T ss_dssp --------------SCCCEEEECTTSCEEEECB
T ss_pred --------------CCccceeEcCCCCEEEEeC
Confidence 2356677777788888774
No 81
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.06 E-value=7.4e-09 Score=91.03 Aligned_cols=144 Identities=10% Similarity=0.042 Sum_probs=102.8
Q ss_pred CCcceEEEecCCCeEEEEeCC------CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-E
Q 024317 45 INPHSVIDRPGSSDLIVLDSS------RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-I 117 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~------~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-l 117 (269)
..|.+++++ .+|++||++.. ...|++++ +|++..+.. .+..|++++++++|+ +
T Consensus 134 ~~~~~i~~d-~~G~l~v~~~~~~~~~~~~~l~~~~-----~g~~~~~~~--------------~~~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 134 NRSNDGRMH-PSGALWIGTMGRKAETGAGSIYHVA-----KGKVTKLFA--------------DISIPNSICFSPDGTTG 193 (326)
T ss_dssp EEEEEEEEC-TTSCEEEEEEETTCCTTCEEEEEEE-----TTEEEEEEE--------------EESSEEEEEECTTSCEE
T ss_pred CCCCCEEEC-CCCCEEEEeCCCcCCCCceEEEEEe-----CCcEEEeeC--------------CCcccCCeEEcCCCCEE
Confidence 458899996 48899999853 46788883 466555431 234789999999996 9
Q ss_pred EEEeCCCCEEEEEeC---Cc-c----eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC
Q 024317 118 YVADKSNHVIRKITN---LG-V----TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 118 yVaD~~n~~I~~~~~---~g-~----~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~ 189 (269)
||+|..+++|.+++. +| . ..+.... .....|.+++++++ |+|||++..+++|.+++++
T Consensus 194 yv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~-------------~~~~~p~gi~~d~~-G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 194 YFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST-------------GIKGGMDGSVCDAE-GHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT-------------TSSSEEEEEEECTT-SCEEEEEETTTEEEEECTT
T ss_pred EEEECCCCEEEEEEcccccCCcccCceEEEECC-------------CCCCCCCeeEECCC-CCEEEEEeCCCEEEEECCC
Confidence 999998999999985 35 2 1222110 01235899999987 8999999888899999997
Q ss_pred CCeEEEecccCccCCCcccceeeeeccceeeEEEe-cCC-cEEEEcCCCC
Q 024317 190 PEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIG-FVA-RPYIIRHTGR 237 (269)
Q Consensus 190 ~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d-~~g-~lyVad~~g~ 237 (269)
+..+.....+ ...|.+++++ +++ .|||+...+.
T Consensus 260 g~~~~~i~~~---------------~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 260 GNHIARYEVP---------------GKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp CCEEEEEECS---------------CSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred CCEEEEEECC---------------CCCcEEEEEecCCCCEEEEEecCCC
Confidence 7655443222 1348889998 675 7999985543
No 82
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.00 E-value=4.7e-08 Score=86.17 Aligned_cols=170 Identities=8% Similarity=0.028 Sum_probs=105.1
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcC-CcccCCCCCcccccCCCCceEEEcCCCC-EEEEe
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGD-GVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVAD 121 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~-g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD 121 (269)
...|..+++ ++..+|+++...+.|..+++ ..++.+...... ...+. ...+.......|.+++++++|+ ||+++
T Consensus 99 ~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~--~~~g~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~spdg~~l~~~~ 173 (361)
T 3scy_A 99 GADPCYLTT--NGKNIVTANYSGGSITVFPI--GQDGALLPASDVIEFKGS-GPDKERQTMPHLHCVRITPDGKYLLADD 173 (361)
T ss_dssp SSCEEEEEE--CSSEEEEEETTTTEEEEEEB--CTTSCBCSCSEEEECCCC-CSCTTTCSSCCEEEEEECTTSSEEEEEE
T ss_pred CCCcEEEEE--CCCEEEEEECCCCEEEEEEe--CCCCcCcccceeEEccCC-CCCccccCCCcceEEEECCCCCEEEEEe
Confidence 457999998 47889999998999999987 344433221100 00000 0001122345678999999998 99999
Q ss_pred CCCCEEEEEeCCcc-e-------EEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 122 KSNHVIRKITNLGV-T-------TIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 122 ~~n~~I~~~~~~g~-~-------~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
...++|.+++.+.. . ...+.... .....-..|.+++++|++..||+++..++.|+.++.+.+..
T Consensus 174 ~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 174 LGTDQIHKFNINPNANADNKEKFLTKGTPEA--------FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp TTTTEEEEEEECTTCCTTTCCCCEEEEEEEE--------EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred CCCCEEEEEEEcCCCCcccccceeecccccc--------eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 98899888863311 1 00000000 00011246889999999668999998889999999875544
Q ss_pred EEecccCccCCCcccceeeeeccceeeEEEecCCc-EEEEcCC
Q 024317 194 SKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIRHT 235 (269)
Q Consensus 194 ~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad~~ 235 (269)
........... ....|.+++++++|+ ||+++..
T Consensus 246 ~~~~~~~~~~~---------~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 246 DEIQTVAADTV---------NAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp EEEEEEESCSS---------CCCCEEEEEECTTSSEEEEEECS
T ss_pred EEeEEEecCCC---------CCCCcccEEECCCCCEEEEECCC
Confidence 32221100001 124578999999995 8888754
No 83
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.00 E-value=2.7e-08 Score=85.13 Aligned_cols=155 Identities=12% Similarity=0.047 Sum_probs=101.8
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
..||++ .+++||++++.+++++++|. .+.++...+..+ ..+.|++.| .+.||++| +.++
T Consensus 98 geGit~--~g~~Ly~ltw~~~~v~V~D~---~Tl~~~~ti~~~--------------~eGwGLt~D-g~~L~vSd-Gs~~ 156 (268)
T 3nok_A 98 AEGLAS--DGERLYQLTWTEGLLFTWSG---MPPQRERTTRYS--------------GEGWGLCYW-NGKLVRSD-GGTM 156 (268)
T ss_dssp EEEEEE--CSSCEEEEESSSCEEEEEET---TTTEEEEEEECS--------------SCCCCEEEE-TTEEEEEC-SSSE
T ss_pred eeEEEE--eCCEEEEEEccCCEEEEEEC---CcCcEEEEEeCC--------------CceeEEecC-CCEEEEEC-CCCE
Confidence 366887 57899999999999999984 456555433211 134567764 35699999 5899
Q ss_pred EEEEeCCcc---eEEe-cCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccC-c
Q 024317 127 IRKITNLGV---TTIA-GGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSG-S 201 (269)
Q Consensus 127 I~~~~~~g~---~~~~-g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g-~ 201 (269)
|+++|+... .++. +... ..+..++.|... + |.||+.....+.|.+|++..+.+...-..+ .
T Consensus 157 l~~iDp~T~~v~~~I~V~~~g------------~~v~~lNeLe~~-d-G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L 222 (268)
T 3nok_A 157 LTFHEPDGFALVGAVQVKLRG------------QPVELINELECA-N-GVIYANIWHSSDVLEIDPATGTVVGVIDASAL 222 (268)
T ss_dssp EEEECTTTCCEEEEEECEETT------------EECCCEEEEEEE-T-TEEEEEETTCSEEEEECTTTCBEEEEEECHHH
T ss_pred EEEEcCCCCeEEEEEEeCCCC------------cccccccccEEe-C-CEEEEEECCCCeEEEEeCCCCcEEEEEECCCC
Confidence 999998753 2221 1110 125677888876 4 799999999999999999887665433221 0
Q ss_pred -cCCCcccceeeeeccceeeEEEecCC-cEEEEcCCCCccccc
Q 024317 202 -ALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRHTGRLDPPL 242 (269)
Q Consensus 202 -~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~~g~~~~~~ 242 (269)
+...... ......|+|||.|+++ ++||+- ..|...
T Consensus 223 ~~~~~~~~---~~~~~vlNGIA~dp~~~rlfVTG---K~Wp~~ 259 (268)
T 3nok_A 223 TRAVAGQV---TNPEAVLNGIAVEPGSGRIFMTG---KLWPRL 259 (268)
T ss_dssp HHHHTTTC---CCTTCCEEEEEECTTTCCEEEEE---TTCSEE
T ss_pred cccccccc---cCcCCceEEEEEcCCCCEEEEeC---CCCCce
Confidence 0000000 0012569999999976 999974 455554
No 84
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.95 E-value=1e-07 Score=82.48 Aligned_cols=159 Identities=12% Similarity=0.116 Sum_probs=105.7
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCE-EEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEe
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSA-FYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVAD 121 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~-I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD 121 (269)
...|.+++++|++..+|+++...+. |..+++ +.+|.+...... ....-..|.+++++++|+ +|+++
T Consensus 127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~--~~~g~~~~~~~~----------~~~~~~~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 127 PYDAVGIAISPNGNGLILIDRSSANTVRRFKI--DADGVLFDTGQE----------FISGGTRPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp CTTEEEEEECTTSSCEEEEEETTTTEEEEEEE--CTTCCEEEEEEE----------EECSSSSEEEEEECTTSSEEEEEE
T ss_pred CCCccceEECCCCCEEEEEecCCCceEEEEEE--CCCCcEeecCCc----------cccCCCCccceEECCCCCEEEEEe
Confidence 3468999998765679999988777 888876 455654332100 001123589999999998 99999
Q ss_pred CCCCEEEEEeCCc-ce-E-EecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecc
Q 024317 122 KSNHVIRKITNLG-VT-T-IAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQ 198 (269)
Q Consensus 122 ~~n~~I~~~~~~g-~~-~-~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~ 198 (269)
..+++|.+++... .. . +.... .-..|.+++++|++..||++....+.|..++...........
T Consensus 195 ~~~~~v~v~d~~~~~~~~~~~~~~--------------~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~ 260 (331)
T 3u4y_A 195 LIGNSIGILETQNPENITLLNAVG--------------TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKS 260 (331)
T ss_dssp TTTTEEEEEECSSTTSCEEEEEEE--------------CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEE
T ss_pred CCCCeEEEEECCCCcccceeeecc--------------CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecc
Confidence 9999999999653 22 1 11110 024688999999966799999988899999998766533221
Q ss_pred cCcc--CCCcccceeeeeccceeeEEEecCC-cEEEEcCC
Q 024317 199 SGSA--LGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRHT 235 (269)
Q Consensus 199 ~g~~--~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~~ 235 (269)
.... .... ......+++++++| .||++...
T Consensus 261 ~~~~~~~~~~-------~~~~~~~~~~spdg~~l~v~~~~ 293 (331)
T 3u4y_A 261 FGHGLLIDPR-------PLFGANQMALNKTETKLFISANI 293 (331)
T ss_dssp EECCCCCCCG-------GGTTCCCEEECTTSSEEEEEETT
T ss_pred cccccccCCC-------CcccccceEECCCCCEEEEecCC
Confidence 1000 0110 11223568999999 58888754
No 85
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.95 E-value=5.1e-08 Score=83.78 Aligned_cols=149 Identities=11% Similarity=0.043 Sum_probs=99.7
Q ss_pred CCcceEEEecCCCeEEEEeC--CCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 45 INPHSVIDRPGSSDLIVLDS--SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~--~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
.+|+|+++++ ++.||++.. +.+.|.++|+ .+|++.....-+ .-.++.|++++ .+.||+++.
T Consensus 21 ~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~---~tg~v~~~i~l~------------~~~fgeGi~~~-g~~lyv~t~ 83 (266)
T 2iwa_A 21 AFTQGLVYAE-NDTLFESTGLYGRSSVRQVAL---QTGKVENIHKMD------------DSYFGEGLTLL-NEKLYQVVW 83 (266)
T ss_dssp CCEEEEEECS-TTEEEEEECSTTTCEEEEEET---TTCCEEEEEECC------------TTCCEEEEEEE-TTEEEEEET
T ss_pred CCcccEEEeC-CCeEEEECCCCCCCEEEEEEC---CCCCEEEEEecC------------CCcceEEEEEe-CCEEEEEEe
Confidence 3689999974 489999975 5799999995 567766554221 12356788886 467999999
Q ss_pred CCCEEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEeccc
Q 024317 123 SNHVIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQS 199 (269)
Q Consensus 123 ~n~~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~ 199 (269)
.++++.++|.+.. .++.- + ...+++|+ ++++.|||+| +.++|+.+++........-..
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~-g---------------~~~g~glt--~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTH-Q---------------MKDGWGLA--TDGKILYGSD-GTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEEC-C---------------SSSCCEEE--ECSSSEEEEC-SSSEEEEECTTTCCEEEEEEC
T ss_pred cCCEEEEEECCCCcEEEEEEC-C---------------CCCeEEEE--ECCCEEEEEC-CCCeEEEEECCCCcEEEEEEE
Confidence 9999999997643 33311 0 01234554 4557999999 688999999987554333222
Q ss_pred CccCCCcccceeeeeccceeeEEEecCCcEEEEcC-CCCcc
Q 024317 200 GSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH-TGRLD 239 (269)
Q Consensus 200 g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~-~g~~~ 239 (269)
+. .+ ..+..|.++.+. +|.+|++.. ++.+.
T Consensus 145 g~-~~--------~p~~~~nele~~-dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 145 KY-NG--------HRVIRLNELEYI-NGEVWANIWQTDCIA 175 (266)
T ss_dssp EE-TT--------EECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred CC-CC--------cccccceeEEEE-CCEEEEecCCCCeEE
Confidence 10 01 023457888888 789998883 44444
No 86
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.90 E-value=1.6e-07 Score=81.29 Aligned_cols=152 Identities=6% Similarity=0.009 Sum_probs=98.6
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccE-EEEEcCCcccCCCCCcccccCCCCce-EEEcCCCC-EEEE
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKS-FAVDMKGN-IYVA 120 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~-~~~~g~g~~g~~dg~~~~~~~~~P~g-iavd~~G~-lyVa 120 (269)
...| ++++++++..+|+++...++|+++|+ .++++ ...... -..|.. ++++++|+ +|++
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~---~~~~~~~~~~~~--------------~~~~~~~~~~s~dg~~l~~~ 101 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIET---QLEPPKVVAIQE--------------GQSSMADVDITPDDQFAVTV 101 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEEC---SSSSCEEEEEEE--------------CSSCCCCEEECTTSSEEEEC
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEEC---CCCceeEEeccc--------------CCCCccceEECCCCCEEEEe
Confidence 3456 99998766679999998999999985 34543 222211 236777 99999998 6643
Q ss_pred eCCCC--EEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCe-EEEEECCCCeEEE
Q 024317 121 DKSNH--VIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQL-IRQINLKPEDCSK 195 (269)
Q Consensus 121 D~~n~--~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~-I~~~~~~~~~~~~ 195 (269)
+..++ .|.+++.+.. ...... -..|.+++++|++..||+++...+. |+.++.+......
T Consensus 102 ~~~~~~~~i~v~d~~~~~~~~~~~~----------------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 102 TGLNHPFNMQSYSFLKNKFISTIPI----------------PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CCSSSSCEEEEEETTTTEEEEEEEC----------------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCCCCcccEEEEECCCCCeEEEEEC----------------CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 33334 9999997543 222211 1357899999996679999998777 8777765432111
Q ss_pred ecccCccCCCcccceeeeeccceeeEEEecCCc-EEEEcC-CCCcc
Q 024317 196 SSQSGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIRH-TGRLD 239 (269)
Q Consensus 196 ~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad~-~g~~~ 239 (269)
..... .. . .-..|.+++++++|+ +|+++. .+.+.
T Consensus 166 ~~~~~-~~------~---~~~~~~~~~~spdg~~l~v~~~~~~~v~ 201 (331)
T 3u4y_A 166 DTGQE-FI------S---GGTRPFNITFTPDGNFAFVANLIGNSIG 201 (331)
T ss_dssp EEEEE-EE------C---SSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred ecCCc-cc------c---CCCCccceEECCCCCEEEEEeCCCCeEE
Confidence 00000 00 0 114589999999996 899884 44444
No 87
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.87 E-value=5.9e-08 Score=86.54 Aligned_cols=163 Identities=10% Similarity=0.115 Sum_probs=98.7
Q ss_pred CCcceEEEecCCCeEEEEeC-------------CCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEE
Q 024317 45 INPHSVIDRPGSSDLIVLDS-------------SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAV 111 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~-------------~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giav 111 (269)
.++..|++++ +|.|||+.. ..++|+|++ .+|++- .++ .+.+.......+..|.+|++
T Consensus 140 H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~----~dG~ip----~~n-Pf~~~~i~a~G~RNp~Gla~ 209 (347)
T 3das_A 140 HNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMT----PDGEPA----PGN-PFPGSPVYSYGHRNVQGLAW 209 (347)
T ss_dssp CCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEEC----TTSSBC----TTC-SSTTCCEEEBCCSBCCEEEE
T ss_pred ccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEe----CCCCcc----CCC-CCCCCeEEeeCCCCcceEEE
Confidence 4567799974 789999942 356778874 444310 000 01111122345789999999
Q ss_pred cCCCCEEEEeCCCC---EEEEEeCCcc---eEEecCCCCCCCCCCCccc-cccc----cCceEEEEeCCCCEEEEEECCC
Q 024317 112 DMKGNIYVADKSNH---VIRKITNLGV---TTIAGGGSKKEGRADGPAQ-NASF----SNDFELTFVPHICALLISDHGN 180 (269)
Q Consensus 112 d~~G~lyVaD~~n~---~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~-~~~l----~~P~gia~~~~~g~LyVaD~~n 180 (269)
|++|+||++|.+.+ .|.++.+.+. ..+.+.. ...+... ...+ ..|.||++.. +.+|+++..+
T Consensus 210 dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~-----~~~~~~~P~~~~~~~~~ap~G~~~~~--g~~~~~~l~~ 282 (347)
T 3das_A 210 DDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKG-----GGSGFHDPVAQWSTDEASPSGIAYAE--GSVWMAGLRG 282 (347)
T ss_dssp CTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSC-----CCTTCCCCSEEECTTTCCEEEEEEET--TEEEEEESTT
T ss_pred CCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCC-----CCccccCCcEecCCCCCCCcceEEEc--CceeeccccC
Confidence 99999999997653 4555543322 1111110 0001000 0111 3689999873 8999999999
Q ss_pred CeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC
Q 024317 181 QLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH 234 (269)
Q Consensus 181 ~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~ 234 (269)
++|+++..++.... ... ..+..+ ...+|.+|+++++|.|||++.
T Consensus 283 ~~l~~v~~~~~~~~--~~~-------e~~l~~-~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 283 ERLWRIPLKGTAAA--ADP-------QAFLEG-EYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp CSEEEEEEETTEES--SCC-------EEESTT-TSSCEEEEEEEETTEEEEEEC
T ss_pred CEEEEEEecCCcee--cce-------EEeecC-CCCCccEEEECCCCcEEEEEc
Confidence 99999987765321 110 000111 236899999999999999974
No 88
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.87 E-value=2.1e-07 Score=80.37 Aligned_cols=158 Identities=9% Similarity=0.085 Sum_probs=105.0
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK 122 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~ 122 (269)
...|.++++++++..+|+++..++.|..++++ ..+|+...+.... .-..|.+++++++|+ ||+++.
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~------------~~~~~~~~~~s~dg~~l~~~~~ 103 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA-PDDGALTFAAESA------------LPGSLTHISTDHQGQFVFVGSY 103 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEEC-TTTCCEEEEEEEE------------CSSCCSEEEECTTSSEEEEEET
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEec-CCCCceeeccccc------------cCCCCcEEEEcCCCCEEEEEec
Confidence 45799999987666799999887899988763 1245544332110 012789999999998 999998
Q ss_pred CCCEEEEEeC-Ccc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCC-CeEEEec-
Q 024317 123 SNHVIRKITN-LGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKP-EDCSKSS- 197 (269)
Q Consensus 123 ~n~~I~~~~~-~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~-~~~~~~~- 197 (269)
..+.|..++. ++. ....... ....|.++++++++..||+++..+++|+.++... .......
T Consensus 104 ~~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 169 (343)
T 1ri6_A 104 NAGNVSVTRLEDGLPVGVVDVVE--------------GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP 169 (343)
T ss_dssp TTTEEEEEEEETTEEEEEEEEEC--------------CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE
T ss_pred CCCeEEEEECCCCcccccccccc--------------CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecc
Confidence 8888888876 332 1111110 1235889999999778999997788999998765 3332211
Q ss_pred -ccCccCCCcccceeeeeccceeeEEEecCCc-EEEEc-CCCCcc
Q 024317 198 -QSGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIR-HTGRLD 239 (269)
Q Consensus 198 -~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad-~~g~~~ 239 (269)
......+ ..|.+++++++|+ +|+++ ..+++.
T Consensus 170 ~~~~~~~~-----------~~~~~~~~~pdg~~l~~~~~~~~~i~ 203 (343)
T 1ri6_A 170 AEVTTVEG-----------AGPRHMVFHPNEQYAYCVNELNSSVD 203 (343)
T ss_dssp EEEECSTT-----------CCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred cccccCCC-----------CCcceEEECCCCCEEEEEeCCCCEEE
Confidence 0000001 3578899999995 88887 444443
No 89
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.86 E-value=3.1e-07 Score=79.26 Aligned_cols=166 Identities=11% Similarity=0.055 Sum_probs=106.7
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK 122 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~ 122 (269)
...|.++++++++..+|+++...++|+.+|+ ..++++...... .. ....-..|.+++++++|. +|+++.
T Consensus 128 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~--~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 128 LDGCHSANISPDNRTLWVPALKQDRICLFTV--SDDGHLVAQDPA-EV-------TTVEGAGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp CTTBCCCEECTTSSEEEEEEGGGTEEEEEEE--CTTSCEEEEEEE-EE-------ECSTTCCEEEEEECTTSSEEEEEET
T ss_pred CCCceEEEECCCCCEEEEecCCCCEEEEEEe--cCCCceeeeccc-cc-------ccCCCCCcceEEECCCCCEEEEEeC
Confidence 3468999998766689999988899999987 344665432200 00 000113688999999998 999998
Q ss_pred CCCEEEEEeCC---cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC--CCeEEEe
Q 024317 123 SNHVIRKITNL---GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK--PEDCSKS 196 (269)
Q Consensus 123 ~n~~I~~~~~~---g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~--~~~~~~~ 196 (269)
..++|..++.+ |. ...........+ ......|.++++++++..||+++..++.|..++.+ ++.....
T Consensus 198 ~~~~i~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 198 LNSSVDVWELKDPHGNIECVQTLDMMPEN-------FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp TTTEEEEEESSCTTSCCEEEEEEECSCTT-------CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred CCCEEEEEEecCCCCcEEEEeeccccCcc-------ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 88999999864 32 211111000000 01134678999999967899999888999999886 3222221
Q ss_pred cccCccCCCcccceeeeeccceeeEEEecCCc-EEEEcC-CCCcc
Q 024317 197 SQSGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIRH-TGRLD 239 (269)
Q Consensus 197 ~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad~-~g~~~ 239 (269)
... ..+ ..|.+++++++|+ +|++.. .+.+.
T Consensus 271 ~~~--~~~-----------~~~~~~~~s~dg~~l~~~~~~~~~v~ 302 (343)
T 1ri6_A 271 GFQ--PTE-----------TQPRGFNVDHSGKYLIAAGQKSHHIS 302 (343)
T ss_dssp EEE--ECS-----------SSCCCEEECTTSSEEEEECTTTCEEE
T ss_pred eee--cCC-----------CccceEEECCCCCEEEEecCCCCeEE
Confidence 111 001 2378899999995 888883 45544
No 90
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.78 E-value=3.4e-07 Score=81.26 Aligned_cols=171 Identities=14% Similarity=0.049 Sum_probs=102.8
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK 122 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~ 122 (269)
...|++++++|++..+|++|.+.++|+.+++. .+|++..+..... ...-..|.+++++++|. ||+++.
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~--~~g~~~~~~~~~~---------~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKL--ASGEVELVGSVDA---------PDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEEC--TTSCEEEEEEEEC---------SSTTCCEEEEEECTTSSEEEEEET
T ss_pred CCcceEEEECCCCCEEEEEcCCCCEEEEEEEC--CCCCEEEeeeEec---------CCCCCCCCEeEECCCCCEEEEEEC
Confidence 35799999987666799999989999999863 2566543311000 00124699999999996 899998
Q ss_pred CCCEEEEEeC---Ccc-eE----EecCCCCCCCCCCCccccccccCceEEE-EeCCCCEEEEEECCCC-----eEEEEEC
Q 024317 123 SNHVIRKITN---LGV-TT----IAGGGSKKEGRADGPAQNASFSNDFELT-FVPHICALLISDHGNQ-----LIRQINL 188 (269)
Q Consensus 123 ~n~~I~~~~~---~g~-~~----~~g~~~~~~~~~~~~~~~~~l~~P~gia-~~~~~g~LyVaD~~n~-----~I~~~~~ 188 (269)
..++|.+++. .|. .. +..... .+....... .....|.+++ ++|++..||+++.+.+ +|..|+.
T Consensus 213 ~~~~v~v~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~--~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~ 289 (365)
T 1jof_A 213 AGNRICEYVIDPATHMPVYTHHSFPLIPP-GIPDRDPET--GKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKL 289 (365)
T ss_dssp TTTEEEEEEECTTTCCEEEEEEEEESSCT-TCCCBCTTT--SSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEE
T ss_pred CCCeEEEEEEeCCCCcEEEccceEEcCCC-CcCCccccc--ccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEE
Confidence 8888888753 354 21 111110 000000000 0122588999 9999778999998665 8888876
Q ss_pred C-CCeEEEecccCccCCCcccceeeeeccceeeEEEec---CC-cEEEEcCC-CCcc
Q 024317 189 K-PEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGF---VA-RPYIIRHT-GRLD 239 (269)
Q Consensus 189 ~-~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~---~g-~lyVad~~-g~~~ 239 (269)
+ .+......... .. .-..|.++++++ +| .||+++.. +.+.
T Consensus 290 ~~~g~~~~~~~~~-~~----------~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~ 335 (365)
T 1jof_A 290 RDCGSIEKQLFLS-PT----------PTSGGHSNAVSPCPWSDEWMAITDDQEGWLE 335 (365)
T ss_dssp CTTSCEEEEEEEE-EC----------SSCCTTCCCEEECTTCTTEEEEECSSSCEEE
T ss_pred CCCCCEEEeeeee-ec----------CCCCcccceecCCCcCCCEEEEEEcCCCeEE
Confidence 4 22222211000 00 013466788888 66 78888753 5443
No 91
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.77 E-value=2.8e-06 Score=75.09 Aligned_cols=140 Identities=12% Similarity=0.235 Sum_probs=101.1
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~n 124 (269)
.|.++++++++..||++....+.|+.+|+ .+++.......+ ..|.+++++++|. +|++...+
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~---~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~~~~~~~ 137 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDT---TSNTVAGTVKTG--------------KSPLGLALSPDGKKLYVTNNGD 137 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEET---TTTEEEEEEECS--------------SSEEEEEECTTSSEEEEEETTT
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEEC---CCCeEEEEEeCC--------------CCcceEEECCCCCEEEEEeCCC
Confidence 78999998777779999988899999985 355544433211 2578999999998 78999989
Q ss_pred CEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 125 HVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 125 ~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
+.|+.++.. ++ ...... -..|.++++++++..||++...++.|+.++............
T Consensus 138 ~~v~~~d~~~~~~~~~~~~----------------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--- 198 (391)
T 1l0q_A 138 KTVSVINTVTKAVINTVSV----------------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV--- 198 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC----------------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---
T ss_pred CEEEEEECCCCcEEEEEec----------------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec---
Confidence 999999964 43 222211 134789999998778999999899999999887654432211
Q ss_pred CCCcccceeeeeccceeeEEEecCC-cEEEEc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIR 233 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad 233 (269)
-..+.+++++++| .+|++.
T Consensus 199 ------------~~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 199 ------------EAAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp ------------SSEEEEEEECTTSSEEEEEE
T ss_pred ------------CCCccceEECCCCCEEEEEe
Confidence 1346677787777 466665
No 92
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.75 E-value=1.1e-07 Score=89.34 Aligned_cols=123 Identities=13% Similarity=0.157 Sum_probs=83.5
Q ss_pred cCCCCcceEEEecCCCeEEEEeCCC---------------------CEEEEEecCC----CCCccEEE--EEcCCccc--
Q 024317 42 QLEINPHSVIDRPGSSDLIVLDSSR---------------------SAFYTLSFPL----SEESVVKR--LAGDGVQG-- 92 (269)
Q Consensus 42 ~~~~~P~giav~~~~g~lyV~D~~~---------------------~~I~~~dl~~----~~~g~~~~--~~g~g~~g-- 92 (269)
..+..|++|+++|.++.||++-++| +.|+++...- ....+... +.|.....
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 3566899999998899999996643 6788886421 01112233 33322100
Q ss_pred --CC--CCCcccccCCCCceEEEcCCCCEEE-EeC-----------CCCEEEEEeC-Ccc-eEEecCCCCCCCCCCCccc
Q 024317 93 --YS--DGEPGSARFDKPKSFAVDMKGNIYV-ADK-----------SNHVIRKITN-LGV-TTIAGGGSKKEGRADGPAQ 154 (269)
Q Consensus 93 --~~--dg~~~~~~~~~P~giavd~~G~lyV-aD~-----------~n~~I~~~~~-~g~-~~~~g~~~~~~~~~~~~~~ 154 (269)
+. .+......|+.|.+|++|++|+||| +|. .++.++++++ .|. ..++...
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P------------ 528 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP------------ 528 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC------------
T ss_pred ccccCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC------------
Confidence 00 0111235799999999999999999 886 3668999998 466 6655321
Q ss_pred cccccCceEEEEeCCCCEEEEEEC
Q 024317 155 NASFSNDFELTFVPHICALLISDH 178 (269)
Q Consensus 155 ~~~l~~P~gia~~~~~g~LyVaD~ 178 (269)
.+..|+||+++|++..|||+-.
T Consensus 529 --~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 529 --IGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp --TTCEEEEEEECTTSSEEEEEEE
T ss_pred --CCccccCCEECCCCCEEEEEEe
Confidence 1457999999999889999864
No 93
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.74 E-value=2.9e-06 Score=74.98 Aligned_cols=146 Identities=14% Similarity=0.253 Sum_probs=103.9
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~n 124 (269)
.|.++++++++..+|++....+.|+.+|+ .+++.......+ ..|.+++++++|. ||++....
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~---~~~~~~~~~~~~--------------~~v~~~~~spdg~~l~~~~~~~ 95 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDT---ATNNVIATVPAG--------------SSPQGVAVSPDGKQVYVTNMAS 95 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEET---TTTEEEEEEECS--------------SSEEEEEECTTSSEEEEEETTT
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEEC---CCCeEEEEEECC--------------CCccceEECCCCCEEEEEECCC
Confidence 58999998766678999988899999985 456655443221 1678999999988 88999888
Q ss_pred CEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 125 HVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 125 ~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
+.|++++.... ...... -..|.++++++++..||++...++.|+.++............
T Consensus 96 ~~v~v~d~~~~~~~~~~~~----------------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--- 156 (391)
T 1l0q_A 96 STLSVIDTTSNTVAGTVKT----------------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV--- 156 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC----------------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---
T ss_pred CEEEEEECCCCeEEEEEeC----------------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec---
Confidence 99999997643 222211 135789999998667999999999999999876654432221
Q ss_pred CCCcccceeeeeccceeeEEEecCC-cEEEEc-CCCCcc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIR-HTGRLD 239 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad-~~g~~~ 239 (269)
+ ..|..++++++| .+|++. .++.+.
T Consensus 157 -~-----------~~~~~~~~~~dg~~l~~~~~~~~~v~ 183 (391)
T 1l0q_A 157 -G-----------RSPKGIAVTPDGTKVYVANFDSMSIS 183 (391)
T ss_dssp -C-----------SSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred -C-----------CCcceEEECCCCCEEEEEeCCCCEEE
Confidence 1 336678888888 455665 334443
No 94
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.71 E-value=3e-07 Score=81.59 Aligned_cols=157 Identities=7% Similarity=-0.025 Sum_probs=98.3
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC---EEEE
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN---IYVA 120 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~---lyVa 120 (269)
...|..+++++++..||+++.. .|..+++ ..+|++....... .-..|..++++++|+ +|++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~--~v~~~~~--~~~g~~~~~~~~~------------~~g~~~~~~~spdg~~l~~~~~ 102 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK--KWSSFAV--KSPTEIVHEASHP------------IGGHPRANDADTNTRAIFLLAA 102 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT--EEEEEEE--EETTEEEEEEEEE------------CCSSGGGGCTTSCCEEEEEEEC
T ss_pred CCCCcEEEECCCCCEEEEEccc--eEEEEEE--CCCCCEEEeeEee------------cCCCCccEEECCCCCEEEEEEe
Confidence 3479999998766679999876 7888875 2356654432110 001377899999998 3455
Q ss_pred e------C------CCCEEEEEe--CCcc-e-EEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEE
Q 024317 121 D------K------SNHVIRKIT--NLGV-T-TIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIR 184 (269)
Q Consensus 121 D------~------~n~~I~~~~--~~g~-~-~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~ 184 (269)
+ + ..+.+..++ .+|. . .+..... .....|++++++|++..||++|.++++|+
T Consensus 103 ~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~------------~~~~~~~~~~~spdG~~l~~~~~~~~~v~ 170 (365)
T 1jof_A 103 KQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY------------QENTGIHGMVFDPTETYLYSADLTANKLW 170 (365)
T ss_dssp SSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC------------CTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred cCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe------------CCCCcceEEEECCCCCEEEEEcCCCCEEE
Confidence 4 2 355666555 4565 2 2221000 01356899999999668999999889999
Q ss_pred EEECC-CCeEEEecccCccCCCcccceeeeeccceeeEEEecCC-cEEEEcC-CCCc
Q 024317 185 QINLK-PEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRH-TGRL 238 (269)
Q Consensus 185 ~~~~~-~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~-~g~~ 238 (269)
.++.+ .+..........+. .-..|.+++++++| .+|+++. .+.+
T Consensus 171 ~~~~~~~g~~~~~~~~~~~~----------~g~~p~~~~~spdg~~l~v~~~~~~~v 217 (365)
T 1jof_A 171 THRKLASGEVELVGSVDAPD----------PGDHPRWVAMHPTGNYLYALMEAGNRI 217 (365)
T ss_dssp EEEECTTSCEEEEEEEECSS----------TTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEECCCCCEEEeeeEecCC----------CCCCCCEeEECCCCCEEEEEECCCCeE
Confidence 99986 33332211110000 01458999999999 6888874 4443
No 95
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.69 E-value=2.2e-06 Score=73.15 Aligned_cols=181 Identities=10% Similarity=-0.010 Sum_probs=110.2
Q ss_pred CCcEEEEEe-cCccCCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCce
Q 024317 30 DGYTVTTVI-DGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKS 108 (269)
Q Consensus 30 ~g~~~~~~~-~g~~~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~g 108 (269)
..+.+...+ .-.+....+.||++++.++.||++.....+|+++|+ +|++.....- ..+..|.|
T Consensus 11 ~~y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~----~g~v~~~i~l------------~g~~D~EG 74 (255)
T 3qqz_A 11 QNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTT----NGDLIRTIPL------------DFVKDLET 74 (255)
T ss_dssp TTCEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEET----TCCEEEEEEC------------SSCSSEEE
T ss_pred cceEEEEeceECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeC----CCCEEEEEec------------CCCCChHH
Confidence 346665543 223344689999998778899986666899999974 4776665421 12357899
Q ss_pred EEEcCCCCEEEEeCCCCEEEEEe--CCcceEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC-eEEE
Q 024317 109 FAVDMKGNIYVADKSNHVIRKIT--NLGVTTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ-LIRQ 185 (269)
Q Consensus 109 iavd~~G~lyVaD~~n~~I~~~~--~~g~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~-~I~~ 185 (269)
|+++.+|.+||++-.++++.+++ .++............... .. =....|||++++.+.||++..... +|+.
T Consensus 75 Ia~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~-----~~-N~g~EGLA~d~~~~~L~va~E~~p~~i~~ 148 (255)
T 3qqz_A 75 IEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQES-----PT-NCGFEGLAYSRQDHTFWFFKEKNPIEVYK 148 (255)
T ss_dssp EEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSC-----CC-SSCCEEEEEETTTTEEEEEEESSSEEEEE
T ss_pred eEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccc-----cc-cCCcceEEEeCCCCEEEEEECcCCceEEE
Confidence 99999999999998899999886 344211111100000000 00 012489999998779998887655 7888
Q ss_pred EEC--CCCeEEEecccCccCCCcccceeeeeccceeeEEEecCC-cEEEEcCCCCccc
Q 024317 186 INL--KPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIRHTGRLDP 240 (269)
Q Consensus 186 ~~~--~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad~~g~~~~ 240 (269)
++- .+.......... +.....+..+.+|++|+.- ++||.....+...
T Consensus 149 ~~g~~~~~~l~i~~~~~--------~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~ 198 (255)
T 3qqz_A 149 VNGLLSSNELHISKDKA--------LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQ 198 (255)
T ss_dssp EESTTCSSCCEEEECHH--------HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred EcccccCCceeeecchh--------hccccccCCceeEEEcCCCCeEEEEECCCCeEE
Confidence 871 111111111100 0001123458899999876 7888876544443
No 96
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.64 E-value=1.3e-06 Score=75.49 Aligned_cols=152 Identities=8% Similarity=-0.025 Sum_probs=98.0
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~n~ 125 (269)
+.|+++. .++.+||+....+.|+++|+ .++++......+ ....|.+++++++|+ +|++...++
T Consensus 2 ~~g~~~~-~~~~~~v~~~~~~~v~~~d~---~~~~~~~~~~~~------------~~~~~~~~~~s~dg~~~~v~~~~~~ 65 (349)
T 1jmx_B 2 DTGPALK-AGHEYMIVTNYPNNLHVVDV---ASDTVYKSCVMP------------DKFGPGTAMMAPDNRTAYVLNNHYG 65 (349)
T ss_dssp --CCCCC-TTCEEEEEEETTTEEEEEET---TTTEEEEEEECS------------SCCSSCEEEECTTSSEEEEEETTTT
T ss_pred Ccccccc-CCCEEEEEeCCCCeEEEEEC---CCCcEEEEEecC------------CCCCCceeEECCCCCEEEEEeCCCC
Confidence 4577775 58999999999999999985 456654433211 012588999999997 899998899
Q ss_pred EEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-----------CCeEEEEECCCCe
Q 024317 126 VIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-----------NQLIRQINLKPED 192 (269)
Q Consensus 126 ~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-----------n~~I~~~~~~~~~ 192 (269)
.|.+++.. ++ .......... ...-..|.+++++|++..||++... .+.|+.++.....
T Consensus 66 ~i~~~d~~t~~~~~~~~~~~~~---------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 66 DIYGIDLDTCKNTFHANLSSVP---------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EEEEEETTTTEEEEEEESCCST---------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred cEEEEeCCCCcEEEEEEccccc---------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 99999975 43 2222111000 0012358899999997789999854 5789999876421
Q ss_pred EEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCC
Q 024317 193 CSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHT 235 (269)
Q Consensus 193 ~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~ 235 (269)
....... ......+.+++++++|++|+++..
T Consensus 137 ~~~~~~~------------~~~~~~~~~~~~s~dg~l~~~~~~ 167 (349)
T 1jmx_B 137 EAKPVRT------------FPMPRQVYLMRAADDGSLYVAGPD 167 (349)
T ss_dssp GBCCSEE------------EECCSSCCCEEECTTSCEEEESSS
T ss_pred ccceeee------------ccCCCcccceeECCCCcEEEccCc
Confidence 1000000 001124677889999998887654
No 97
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.63 E-value=3.1e-07 Score=84.81 Aligned_cols=115 Identities=15% Similarity=0.136 Sum_probs=78.1
Q ss_pred cCCCCceEEEcCCCCEEEEeCCCCEEEEEeC-Ccc-eEEecCCCCCCCCCCCccccccccCceEEEEeCC---CCEEEEE
Q 024317 102 RFDKPKSFAVDMKGNIYVADKSNHVIRKITN-LGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPH---ICALLIS 176 (269)
Q Consensus 102 ~~~~P~giavd~~G~lyVaD~~n~~I~~~~~-~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~---~g~LyVa 176 (269)
.|..|.+|+++++|+|||++...++|++++. +|. ..+....... ........+.|||++|+ ++.|||+
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~-------~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIV-------NDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCC-------CCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccc-------cccCCCCceeEEEECCCcCcCCEEEEE
Confidence 4789999999999999999987789999986 466 5554432110 00001245679999996 6999999
Q ss_pred ECC------------CCeEEEEECCCC--eE----EEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC
Q 024317 177 DHG------------NQLIRQINLKPE--DC----SKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH 234 (269)
Q Consensus 177 D~~------------n~~I~~~~~~~~--~~----~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~ 234 (269)
++. ..+|.+++.+.. .+ ..+... +.+ ..-.+.+|+++++|.|||+..
T Consensus 98 ~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~--p~~---------~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 98 GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGL--PSS---------KDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEE--CCC---------SSCCEEEEEECTTSCEEEEEC
T ss_pred EeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcC--CCC---------CCCCCCeEeECCCCeEEEEEC
Confidence 964 468999986532 11 111111 111 113488999999999999963
No 98
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.61 E-value=5.6e-06 Score=77.94 Aligned_cols=154 Identities=8% Similarity=-0.051 Sum_probs=102.6
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC----CCC-EEEE
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM----KGN-IYVA 120 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~----~G~-lyVa 120 (269)
.|+++++++++..+|+++.. +.|.+||+. ..++++...+..+ ..|.++++++ +|. +|++
T Consensus 180 ~~~~v~~spdg~~l~v~~~d-~~V~v~D~~-~~t~~~~~~i~~g--------------~~p~~va~sp~~~~dg~~l~v~ 243 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRD-ARIDMIDLW-AKEPTKVAEIKIG--------------IEARSVESSKFKGYEDRYTIAG 243 (543)
T ss_dssp TEEEEEECTTSCEEEEEETT-SEEEEEETT-SSSCEEEEEEECC--------------SEEEEEEECCSTTCTTTEEEEE
T ss_pred ccceEEECCCCCEEEEECCC-CeEEEEECc-CCCCcEEEEEecC--------------CCcceEEeCCCcCCCCCEEEEE
Confidence 38999999877889999987 999999862 1345544332221 2689999999 887 9999
Q ss_pred eCCCCEEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEec
Q 024317 121 DKSNHVIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSS 197 (269)
Q Consensus 121 D~~n~~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~ 197 (269)
++..+.|.++|... + .++...+... .... -..-..|.+|+++++++.+||+....++|+.++..........
T Consensus 244 ~~~~~~v~v~D~~t~~~~~~i~~~g~~~---~~~~--~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~ 318 (543)
T 1nir_A 244 AYWPPQFAIMDGETLEPKQIVSTRGMTV---DTQT--YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 318 (543)
T ss_dssp EEESSEEEEEETTTCCEEEEEECCEECS---SSCC--EESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEE
T ss_pred EccCCeEEEEeccccccceeecccCccc---Cccc--cccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeE
Confidence 98889999999543 3 3333211100 0000 0001257899999987899999999999999997653211100
Q ss_pred ccCccCCCcccceeeeeccceeeEEEecCCc-EEEEc
Q 024317 198 QSGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIR 233 (269)
Q Consensus 198 ~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad 233 (269)
.. . .-..|.+++++++|+ +|++.
T Consensus 319 ~i--~-----------~~~~~~~~~~spdg~~l~va~ 342 (543)
T 1nir_A 319 SI--G-----------AAPFLHDGGWDSSHRYFMTAA 342 (543)
T ss_dssp EE--E-----------CCSSCCCEEECTTSCEEEEEE
T ss_pred Ee--c-----------cCcCccCceECCCCCEEEEEe
Confidence 00 0 014588899999996 67776
No 99
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.59 E-value=1.7e-06 Score=79.22 Aligned_cols=112 Identities=9% Similarity=0.125 Sum_probs=80.9
Q ss_pred CCCeEEEEeCCC----CEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC-------
Q 024317 55 GSSDLIVLDSSR----SAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK------- 122 (269)
Q Consensus 55 ~~g~lyV~D~~~----~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~------- 122 (269)
....+||++... +.|.++|. .++++...+..| ..| +|+++++|. +||+++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~---~t~~vv~~I~vG--------------~~P-gia~SpDgk~lyVan~~~~~~~~ 144 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDG---STGRILGMTDGG--------------FLP-HPVAAEDGSFFAQASTVFERIAR 144 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEET---TTTEEEEEEEEC--------------SSC-EEEECTTSSCEEEEEEEEEETTE
T ss_pred CCCEEEEECCCcCCCCCeEEEEEC---CCCEEEEEEECC--------------CCC-ceEECCCCCEEEEEecccccccc
Confidence 356899999865 79999985 456655544332 268 999999998 999996
Q ss_pred --CCCEEEEEeCCcc---eEEe-c-CCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-CCeEEEEECCCCeEE
Q 024317 123 --SNHVIRKITNLGV---TTIA-G-GGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-NQLIRQINLKPEDCS 194 (269)
Q Consensus 123 --~n~~I~~~~~~g~---~~~~-g-~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-n~~I~~~~~~~~~~~ 194 (269)
..+.|.+||.... .++. + .... .....|.++++++++..|||++.. .+.|.+|+.....+.
T Consensus 145 G~~~~~VsviD~~t~~vv~~I~v~g~~r~-----------~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 145 GKRTDYVEVFDPVTFLPIADIELPDAPRF-----------LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEETTCCCC-----------CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred CCCCCEEEEEECCCCcEEEEEECCCcccc-----------ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEE
Confidence 3567999997543 3332 2 1100 012569999999998899999975 789999999887654
Q ss_pred E
Q 024317 195 K 195 (269)
Q Consensus 195 ~ 195 (269)
.
T Consensus 214 ~ 214 (426)
T 3c75_H 214 R 214 (426)
T ss_dssp E
T ss_pred E
Confidence 3
No 100
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.57 E-value=2.8e-06 Score=76.68 Aligned_cols=147 Identities=12% Similarity=0.095 Sum_probs=97.3
Q ss_pred ecCCCeEEEEeCC----CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCC----
Q 024317 53 RPGSSDLIVLDSS----RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS---- 123 (269)
Q Consensus 53 ~~~~g~lyV~D~~----~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~---- 123 (269)
.|....+||+|.. .++|.++|. .++++...+..| ..|. |+++++|. +||++..
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~---~t~~v~~~I~vG--------------~~P~-va~spDG~~lyVan~~~~r~ 102 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDG---EAGRVIGMIDGG--------------FLPN-PVVADDGSFIAHASTVFSRI 102 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEET---TTTEEEEEEEEC--------------SSCE-EEECTTSSCEEEEEEEEEET
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEEC---CCCeEEEEEECC--------------CCCc-EEECCCCCEEEEEccccccc
Confidence 3567899999996 689999984 456655544332 2575 99999998 9999852
Q ss_pred -----CCEEEEEeCCcc---eEE-ecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-CCeEEEEECCCCeE
Q 024317 124 -----NHVIRKITNLGV---TTI-AGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-NQLIRQINLKPEDC 193 (269)
Q Consensus 124 -----n~~I~~~~~~g~---~~~-~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-n~~I~~~~~~~~~~ 193 (269)
.+.|.+||.... .++ .+.+... ..-..|.++++++++..|||++.. .+.|.+|+.....+
T Consensus 103 ~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~----------~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 103 ARGERTDYVEVFDPVTLLPTADIELPDAPRF----------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 172 (386)
T ss_dssp TEEEEEEEEEEECTTTCCEEEEEEETTCCCC----------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred ccCCCCCEEEEEECCCCeEEEEEECCCcccc----------ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE
Confidence 467999997654 233 2211100 012479999999998899999974 78999999988765
Q ss_pred EEecccCccCCCcccceeeeeccceee----EEEecCCcEEEEcC-C-CCc
Q 024317 194 SKSSQSGSALGAVSVWVLVSVLSCLVS----LVIGFVARPYIIRH-T-GRL 238 (269)
Q Consensus 194 ~~~~~~g~~~g~~~~~~~~~~l~~p~g----ia~d~~g~lyVad~-~-g~~ 238 (269)
...-.. .+. ....|.| +++.++|.+.+.+. . |++
T Consensus 173 v~tI~v---~g~--------~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 173 KRMLDV---PDC--------YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEEEC---CSE--------EEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred EEEEEC---CCc--------ceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 543221 010 1123444 47778886666663 3 555
No 101
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.56 E-value=1.4e-05 Score=71.54 Aligned_cols=143 Identities=11% Similarity=0.075 Sum_probs=101.4
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK 122 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~ 122 (269)
...|.++++++.+..+|++....+.|+.+|+ .+++....... -..|.+++++++|. ||++..
T Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~---~~~~~~~~~~~--------------~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 211 GKWSKILLYDPIRDLVYCSNWISEDISVIDR---KTKLEIRKTDK--------------IGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp SSSEEEEEEETTTTEEEEEETTTTEEEEEET---TTTEEEEECCC--------------CSEEEEEEECTTSSEEEEEEE
T ss_pred CCCeeEEEEcCCCCEEEEEecCCCcEEEEEC---CCCcEEEEecC--------------CCCceEEEEcCCCCEEEEEEC
Confidence 3468999998877789999988899999985 35554433211 12478999999986 777775
Q ss_pred -------CCCEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 123 -------SNHVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 123 -------~n~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
.++.|+.++.. +. ...... -..|.++++++++..||++...+++|+.++.+....
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~----------------~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~ 337 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGP----------------PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV 337 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEE----------------EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccC----------------CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE
Confidence 35688899964 33 222211 135789999998668999999999999999886654
Q ss_pred EEecccCccCCCcccceeeeeccceeeEEEecCCc-EEEEcC
Q 024317 194 SKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIRH 234 (269)
Q Consensus 194 ~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad~ 234 (269)
...... ...|.+++++++|+ +|++..
T Consensus 338 ~~~~~~---------------~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 338 QKSIPV---------------FDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp EEEEEC---------------SSSEEEEEECTTSSEEEEEEC
T ss_pred EEEecC---------------CCCCCeEEEcCCCCEEEEEec
Confidence 332111 14477889998884 777764
No 102
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.56 E-value=2.6e-05 Score=66.77 Aligned_cols=119 Identities=7% Similarity=-0.013 Sum_probs=82.2
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC--
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK-- 122 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~-- 122 (269)
.|.++++++++..+|+++...+.|+++|+ .+++.......+..+ ..-..|.+++++++|+ +|+++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~---~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~dg~~l~~~~~~~ 103 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDL---VTGETLGRIDLSTPE--------ERVKSLFGAALSPDGKTLAIYESPV 103 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEET---TTCCEEEEEECCBTT--------EEEECTTCEEECTTSSEEEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEEC---CCCCeEeeEEcCCcc--------cccccccceEECCCCCEEEEEeccc
Confidence 49999998766689999999999999985 455554433211000 0112688999999995 999962
Q ss_pred ---------CCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 123 ---------SNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 123 ---------~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
.+++|.+++.... ...... -..|.++++++++..||++ ++.|+.++....
T Consensus 104 ~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~----------------~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~ 164 (337)
T 1pby_B 104 RLELTHFEVQPTRVALYDAETLSRRKAFEA----------------PRQITMLAWARDGSKLYGL---GRDLHVMDPEAG 164 (337)
T ss_dssp EECSSCEEECCCEEEEEETTTTEEEEEEEC----------------CSSCCCEEECTTSSCEEEE---SSSEEEEETTTT
T ss_pred ccccccccccCceEEEEECCCCcEEEEEeC----------------CCCcceeEECCCCCEEEEe---CCeEEEEECCCC
Confidence 3589999997543 222111 1247889999986679998 367999998776
Q ss_pred eEE
Q 024317 192 DCS 194 (269)
Q Consensus 192 ~~~ 194 (269)
...
T Consensus 165 ~~~ 167 (337)
T 1pby_B 165 TLV 167 (337)
T ss_dssp EEE
T ss_pred cEe
Confidence 544
No 103
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.51 E-value=1.1e-05 Score=71.76 Aligned_cols=78 Identities=9% Similarity=0.064 Sum_probs=53.2
Q ss_pred CCcceEEEecCCCeEEEEeC---------CCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCC
Q 024317 45 INPHSVIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG 115 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~---------~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G 115 (269)
..| ++++++++..+||++. ..+.|..||. .++++...+..+... ...-..|.+|+++++|
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~---~t~~~~~~i~~~~~~-------~~~g~~p~~i~~spdg 119 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA---DKLTFEKEISLPPKR-------VQGLNYDGLFRQTTDG 119 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET---TTCCEEEEEEECTTB-------CCBCCCGGGEEECTTS
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC---cCCcEEEEEEcCccc-------cccCCCcceEEECCCC
Confidence 368 9999988889999984 2456999985 344443322111000 0112579999999999
Q ss_pred C-EEEEeCC-CCEEEEEeCC
Q 024317 116 N-IYVADKS-NHVIRKITNL 133 (269)
Q Consensus 116 ~-lyVaD~~-n~~I~~~~~~ 133 (269)
+ |||++.. .+.|.+||.+
T Consensus 120 ~~l~v~n~~~~~~v~v~d~~ 139 (361)
T 2oiz_A 120 KFIVLQNASPATSIGIVDVA 139 (361)
T ss_dssp SEEEEEEESSSEEEEEEETT
T ss_pred CEEEEECCCCCCeEEEEECC
Confidence 7 9999975 6788888854
No 104
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.48 E-value=4.3e-06 Score=71.48 Aligned_cols=139 Identities=12% Similarity=0.047 Sum_probs=92.9
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
+-.||.++ ++.||++....++|.++|+ .+|++.... -+. -.+..|++++ .+.||+++..++
T Consensus 56 ftqGL~~~--~~~Ly~stG~~g~v~~iD~---~Tgkv~~~~-l~~------------~~FgeGit~~-g~~Ly~ltw~~~ 116 (268)
T 3nok_A 56 FTQGLVFH--QGHFFESTGHQGTLRQLSL---ESAQPVWME-RLG------------NIFAEGLASD-GERLYQLTWTEG 116 (268)
T ss_dssp CEEEEEEE--TTEEEEEETTTTEEEECCS---SCSSCSEEE-ECT------------TCCEEEEEEC-SSCEEEEESSSC
T ss_pred ccceEEEE--CCEEEEEcCCCCEEEEEEC---CCCcEEeEE-CCC------------CcceeEEEEe-CCEEEEEEccCC
Confidence 34799994 6899999999999999986 456544432 210 1244678885 567999999999
Q ss_pred EEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 126 VIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 126 ~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
++.++|++.. .++.-. ..++||+.+ ++.||++| +.++|+.+++....+...-..+ .
T Consensus 117 ~v~V~D~~Tl~~~~ti~~~-----------------~eGwGLt~D--g~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~-~ 175 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRYS-----------------GEGWGLCYW--NGKLVRSD-GGTMLTFHEPDGFALVGAVQVK-L 175 (268)
T ss_dssp EEEEEETTTTEEEEEEECS-----------------SCCCCEEEE--TTEEEEEC-SSSEEEEECTTTCCEEEEEECE-E
T ss_pred EEEEEECCcCcEEEEEeCC-----------------CceeEEecC--CCEEEEEC-CCCEEEEEcCCCCeEEEEEEeC-C
Confidence 9999997643 333211 235778755 47999999 5889999998875443322221 0
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEEc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYIIR 233 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVad 233 (269)
.+. .+..+..+... +|.||+..
T Consensus 176 ~g~--------~v~~lNeLe~~-dG~lyanv 197 (268)
T 3nok_A 176 RGQ--------PVELINELECA-NGVIYANI 197 (268)
T ss_dssp TTE--------ECCCEEEEEEE-TTEEEEEE
T ss_pred CCc--------ccccccccEEe-CCEEEEEE
Confidence 110 22345566666 77888877
No 105
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.46 E-value=1.1e-05 Score=73.97 Aligned_cols=172 Identities=11% Similarity=-0.053 Sum_probs=100.5
Q ss_pred CCcceEEEecCCCeEEEEeCC------------------CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSS------------------RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKP 106 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~------------------~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P 106 (269)
..++++.+.|..+.+|+++++ .++|..+|+. ++++...+.-|.. =..|
T Consensus 188 ~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~---~~k~~~tI~vg~~-----------g~~P 253 (462)
T 2ece_A 188 YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLR---KRKRIHSLTLGEE-----------NRMA 253 (462)
T ss_dssp CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETT---TTEEEEEEESCTT-----------EEEE
T ss_pred cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECC---CCcEeeEEecCCC-----------CCcc
Confidence 345667778777778888854 8999999873 3554433322110 1257
Q ss_pred ceEEE--cCCCC-EEEEeC-----CCCEEEEEeCC-cc---eEEecCCCCCCCCCCCcccc----ccccCceEEEEeCCC
Q 024317 107 KSFAV--DMKGN-IYVADK-----SNHVIRKITNL-GV---TTIAGGGSKKEGRADGPAQN----ASFSNDFELTFVPHI 170 (269)
Q Consensus 107 ~giav--d~~G~-lyVaD~-----~n~~I~~~~~~-g~---~~~~g~~~~~~~~~~~~~~~----~~l~~P~gia~~~~~ 170 (269)
..|.+ +++|. .||+.. ..+.|.++..+ |. ..++......... .-.... +.-..|.+|.+++++
T Consensus 254 ~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~-~lp~~~~~f~~~~~~pa~I~lS~DG 332 (462)
T 2ece_A 254 LELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEG-NLPEILKPFKAVPPLVTDIDISLDD 332 (462)
T ss_dssp EEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCS-SCCGGGGGGTEECCCCCCEEECTTS
T ss_pred ceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccc-cccccccccccCCCceeEEEECCCC
Confidence 77767 88887 999887 77788765532 43 1211111100000 000000 012469999999998
Q ss_pred CEEEEEECCCCeEEEEECC-CCeEEEecccCccCCCcc---cceee-eeccceeeEEEecCC-cEEEEc
Q 024317 171 CALLISDHGNQLIRQINLK-PEDCSKSSQSGSALGAVS---VWVLV-SVLSCLVSLVIGFVA-RPYIIR 233 (269)
Q Consensus 171 g~LyVaD~~n~~I~~~~~~-~~~~~~~~~~g~~~g~~~---~~~~~-~~l~~p~gia~d~~g-~lyVad 233 (269)
..|||++.+.+.|.+|+.. .......+.. ..|+.. ....+ .....|.+++++++| +|||++
T Consensus 333 rfLYVSnrg~d~VavfdV~d~~~~~lv~~I--~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 333 KFLYLSLWGIGEVRQYDISNPFKPVLTGKV--KLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEEEEETTTTEEEEEECSSTTSCEEEEEE--ECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEEE--EeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 8999999999999999974 2211111111 011000 00000 012469999999999 899998
No 106
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.40 E-value=5.6e-05 Score=67.74 Aligned_cols=80 Identities=6% Similarity=-0.098 Sum_probs=53.9
Q ss_pred CCcceEEEecCCCeEEEEeC---------CCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCC
Q 024317 45 INPHSVIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG 115 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~---------~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G 115 (269)
..| +|+++|++..+||++. ..+.|.++|. .+.++...+..+. ......-..|.+++++++|
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~---~t~~~~~~i~~~~------~~~~~~g~~p~~~~~spDG 136 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP---VTFLPIADIELPD------APRFDVGPYSWMNANTPNN 136 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC---CCCcEEEEEECCC------ccccccCCCccceEECCCC
Confidence 468 9999998889999985 3567889975 2444333221110 0000012479999999999
Q ss_pred C-EEEEeCC-CCEEEEEeCCcc
Q 024317 116 N-IYVADKS-NHVIRKITNLGV 135 (269)
Q Consensus 116 ~-lyVaD~~-n~~I~~~~~~g~ 135 (269)
. |||++.. .+.|.++| +..
T Consensus 137 ~~l~v~n~~~~~~v~viD-~t~ 157 (373)
T 2mad_H 137 ADLLFFQFAAGPAVGLVV-QGG 157 (373)
T ss_pred CEEEEEecCCCCeEEEEE-CCC
Confidence 8 9999875 68899999 543
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.38 E-value=1.7e-05 Score=70.95 Aligned_cols=146 Identities=12% Similarity=0.059 Sum_probs=103.0
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
..|.++++++ ++.+|++....+.|+.+|+ .+++.......+. .........+++++++|.+|++....
T Consensus 123 ~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~---~~g~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~~~s~~~d 190 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPLLEDEGMDVLDI---NSGQTVRLSPPEK--------YKKKLGFVETISIPEHNELWVSQMQA 190 (433)
T ss_dssp SCBCCCEESS-SSEEEEEBTTSSSEEEEET---TTCCEEEECCCHH--------HHTTCCEEEEEEEGGGTEEEEEEGGG
T ss_pred CCceEEEEeC-CCeEEEEeCCCCeEEEEEC---CCCeEeeecCccc--------ccccCCceeEEEEcCCCEEEEEECCC
Confidence 3578899986 8999999988888999985 4566554321100 01123345679998899999999988
Q ss_pred CEEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCc
Q 024317 125 HVIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGS 201 (269)
Q Consensus 125 ~~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~ 201 (269)
+.|++++.+. . ..+... -..|.++++++++..+|++...++.|+.++............
T Consensus 191 ~~v~~~d~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-- 252 (433)
T 3bws_A 191 NAVHVFDLKTLAYKATVDLT----------------GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-- 252 (433)
T ss_dssp TEEEEEETTTCCEEEEEECS----------------SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--
T ss_pred CEEEEEECCCceEEEEEcCC----------------CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--
Confidence 9999999654 3 333221 245789999999778999998889999999876654332211
Q ss_pred cCCCcccceeeeeccceeeEEEecCC-cEEEEc
Q 024317 202 ALGAVSVWVLVSVLSCLVSLVIGFVA-RPYIIR 233 (269)
Q Consensus 202 ~~g~~~~~~~~~~l~~p~gia~d~~g-~lyVad 233 (269)
+ ..|.+++++++| .+|++.
T Consensus 253 --~-----------~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 253 --I-----------GLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp --C-----------SEEEEEEECTTSSEEEEEE
T ss_pred --C-----------CCceEEEEcCCCCEEEEEE
Confidence 1 237788888888 566665
No 108
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.38 E-value=2.6e-05 Score=65.88 Aligned_cols=142 Identities=14% Similarity=-0.006 Sum_probs=93.4
Q ss_pred CCCcceEEEecCCCeEEEEeCC--CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEe
Q 024317 44 EINPHSVIDRPGSSDLIVLDSS--RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~--~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD 121 (269)
-.+-+|+.++ ++.||++... .+.|.++|+ .+|++.....-+. -.+..|++++ .+.||+++
T Consensus 20 ~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~---~tgkv~~~~~l~~------------~~fgeGi~~~-~~~ly~lt 81 (243)
T 3mbr_X 20 TAFTEGLFYL--RGHLYESTGETGRSSVRKVDL---ETGRILQRAEVPP------------PYFGAGIVAW-RDRLIQLT 81 (243)
T ss_dssp TCCEEEEEEE--TTEEEEEECCTTSCEEEEEET---TTCCEEEEEECCT------------TCCEEEEEEE-TTEEEEEE
T ss_pred ccccccEEEE--CCEEEEECCCCCCceEEEEEC---CCCCEEEEEeCCC------------CcceeEEEEe-CCEEEEEE
Confidence 3467899995 4899999764 579999995 5777766542211 1244678885 57799999
Q ss_pred CCCCEEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecc
Q 024317 122 KSNHVIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQ 198 (269)
Q Consensus 122 ~~n~~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~ 198 (269)
..++++.++|++.. .++.-. ..++||+- +++.||++|. .++|+.+++........-.
T Consensus 82 w~~~~v~v~D~~tl~~~~ti~~~-----------------~~Gwglt~--dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTPRARFRYP-----------------GEGWALTS--DDSHLYMSDG-TAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp SSSSEEEEEETTTTEEEEEEECS-----------------SCCCEEEE--CSSCEEEECS-SSEEEEECTTTCCEEEEEE
T ss_pred eeCCEEEEEECCcCcEEEEEeCC-----------------CCceEEee--CCCEEEEECC-CCeEEEEeCCCCeEEEEEE
Confidence 99999999997643 333211 14577774 4479999995 8899999988754433222
Q ss_pred cCccCCCcccceeeeeccceeeEEEecCCcEEEEc
Q 024317 199 SGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR 233 (269)
Q Consensus 199 ~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad 233 (269)
.+ ..+. .+..+..+... +|+||+..
T Consensus 142 V~-~~g~--------~~~~lNeLe~~-~G~lyanv 166 (243)
T 3mbr_X 142 VT-AGGR--------PLDNLNELEWV-NGELLANV 166 (243)
T ss_dssp CE-ETTE--------ECCCEEEEEEE-TTEEEEEE
T ss_pred Ec-cCCc--------ccccceeeEEe-CCEEEEEE
Confidence 21 0010 22334455555 67888776
No 109
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.37 E-value=4.7e-06 Score=78.29 Aligned_cols=119 Identities=16% Similarity=0.179 Sum_probs=79.4
Q ss_pred ccCCCCceEEEcC-CCCEEEEeCCC---------------------CEEEEEeCCc--------c-e--EEecCCCCCC-
Q 024317 101 ARFDKPKSFAVDM-KGNIYVADKSN---------------------HVIRKITNLG--------V-T--TIAGGGSKKE- 146 (269)
Q Consensus 101 ~~~~~P~giavd~-~G~lyVaD~~n---------------------~~I~~~~~~g--------~-~--~~~g~~~~~~- 146 (269)
..+.+|++|++++ +|.+||+=+.| ++|.++..++ . . .++|......
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 4578999999998 78999996542 6788887533 1 1 2222221100
Q ss_pred ---CCCCCccccccccCceEEEEeCCCCEEEE-EECC-----------CCeEEEEECCCCeEEEecccCccCCCccccee
Q 024317 147 ---GRADGPAQNASFSNDFELTFVPHICALLI-SDHG-----------NQLIRQINLKPEDCSKSSQSGSALGAVSVWVL 211 (269)
Q Consensus 147 ---~~~~~~~~~~~l~~P~gia~~~~~g~LyV-aD~~-----------n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 211 (269)
...........|+.|++|+++++ |.||| +|.. ++.|++++++.+.+..+... +
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~--P--------- 528 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG--P--------- 528 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC--C---------
T ss_pred ccccCccCccccCccCCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC--C---------
Confidence 00001112346999999999997 99999 8873 56899998866655554422 1
Q ss_pred eeeccceeeEEEecCC-cEEEEc
Q 024317 212 VSVLSCLVSLVIGFVA-RPYIIR 233 (269)
Q Consensus 212 ~~~l~~p~gia~d~~g-~lyVad 233 (269)
....|.|+++.+|+ .|||+-
T Consensus 529 --~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 529 --IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp --TTCEEEEEEECTTSSEEEEEE
T ss_pred --CCccccCCEECCCCCEEEEEE
Confidence 22679999999999 788886
No 110
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.33 E-value=5.2e-06 Score=78.54 Aligned_cols=169 Identities=10% Similarity=0.032 Sum_probs=102.0
Q ss_pred CCCcceEEE-e-cCCCeEEEEe-----------------CCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCC
Q 024317 44 EINPHSVID-R-PGSSDLIVLD-----------------SSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFD 104 (269)
Q Consensus 44 ~~~P~giav-~-~~~g~lyV~D-----------------~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~ 104 (269)
...|+|+++ + |+.+.+|++. ...+.+..+|. .+.++...+.-+ .
T Consensus 133 g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~---~t~~v~~qI~Vg--------------g 195 (595)
T 1fwx_A 133 AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDA---DKWEVAWQVLVS--------------G 195 (595)
T ss_dssp CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEET---TTTEEEEEEEES--------------S
T ss_pred CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEEC---CCCeEEEEEEeC--------------C
Confidence 357999997 4 6789999995 34457888874 344544443221 1
Q ss_pred CCceEEEcCCCC-EEEEeCCC--------------CEEEEEeC--------Ccc-eEEecCCCCCCCCCC--Ccc---cc
Q 024317 105 KPKSFAVDMKGN-IYVADKSN--------------HVIRKITN--------LGV-TTIAGGGSKKEGRAD--GPA---QN 155 (269)
Q Consensus 105 ~P~giavd~~G~-lyVaD~~n--------------~~I~~~~~--------~g~-~~~~g~~~~~~~~~~--~~~---~~ 155 (269)
.|.+++++++|. +|++.+.. ..|.+++. +|+ ..+.+- .-..... +.. .-
T Consensus 196 ~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V--~VID~~~~~~~~~~~~I 273 (595)
T 1fwx_A 196 NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV--KVVDGRKEASSLFTRYI 273 (595)
T ss_dssp CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE--EEEECSGGGCCSSEEEE
T ss_pred CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE--EEEeCcccCCceeEEEE
Confidence 689999999888 89998765 44666662 343 222110 0000000 000 01
Q ss_pred ccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcC
Q 024317 156 ASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRH 234 (269)
Q Consensus 156 ~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~ 234 (269)
..=..|.|+.++|++..+||++...++|.+|+.+..... +... .... ......-..-.+|..++++++|++|++..
T Consensus 274 pvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~-~~~~-l~~~-~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ 349 (595)
T 1fwx_A 274 PIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV-FYEN-ADPR-SAVVAEPELGLGPLHTAFDGRGNAYTSLF 349 (595)
T ss_dssp EEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH-HHSC-CCGG-GGEEECCBCCSCEEEEEECTTSEEEEEET
T ss_pred ecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc-cccc-cCcc-cceEEEcCCCCCcceEEECCCCeEEEEEe
Confidence 112579999999998899999999999999998743110 0000 0000 00000000115699999999999999983
No 111
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.32 E-value=5e-05 Score=64.97 Aligned_cols=137 Identities=13% Similarity=0.082 Sum_probs=87.5
Q ss_pred eEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCCCCEEEEEeCC-cc
Q 024317 58 DLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSNHVIRKITNL-GV 135 (269)
Q Consensus 58 ~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~n~~I~~~~~~-g~ 135 (269)
.++|+....+.|..+|. .++++......+. ....|.+++++++|. +|+++...++|.+++.. +.
T Consensus 2 ~~~v~~~~~~~v~~~d~---~~~~~~~~~~~~~-----------~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 67 (337)
T 1pby_B 2 DYILAPARPDKLVVIDT---EKMAVDKVITIAD-----------AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE 67 (337)
T ss_dssp EEEEEEETTTEEEEEET---TTTEEEEEEECTT-----------CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC
T ss_pred cEEEEcCCCCeEEEEEC---CCCcEEEEEEcCC-----------CCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC
Confidence 46777777888888874 4555544332110 001488999999995 89999988999999964 44
Q ss_pred -eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEEC-----------CCCeEEEEECCCCeEEEecccCccC
Q 024317 136 -TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDH-----------GNQLIRQINLKPEDCSKSSQSGSAL 203 (269)
Q Consensus 136 -~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~-----------~n~~I~~~~~~~~~~~~~~~~g~~~ 203 (269)
......+... ..-..|.++++++++..||+++. .++.|++++............
T Consensus 68 ~~~~~~~~~~~----------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~---- 133 (337)
T 1pby_B 68 TLGRIDLSTPE----------ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA---- 133 (337)
T ss_dssp EEEEEECCBTT----------EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC----
T ss_pred eEeeEEcCCcc----------cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC----
Confidence 2212111000 00125889999998669999962 358899999877654332211
Q ss_pred CCcccceeeeeccceeeEEEecCCc-EEEEc
Q 024317 204 GAVSVWVLVSVLSCLVSLVIGFVAR-PYIIR 233 (269)
Q Consensus 204 g~~~~~~~~~~l~~p~gia~d~~g~-lyVad 233 (269)
+ ..|.+++++++|+ +|+++
T Consensus 134 ~-----------~~~~~~~~s~dg~~l~~~~ 153 (337)
T 1pby_B 134 P-----------RQITMLAWARDGSKLYGLG 153 (337)
T ss_dssp C-----------SSCCCEEECTTSSCEEEES
T ss_pred C-----------CCcceeEECCCCCEEEEeC
Confidence 1 2366777888874 77774
No 112
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.32 E-value=1.7e-05 Score=67.65 Aligned_cols=139 Identities=14% Similarity=0.023 Sum_probs=90.4
Q ss_pred cceEEEecCCCeEEEEeCC--CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSS--RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~--~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
-.|+.++ ++.||++... .++|.++|+ .+|++.....-+ .-.+..||+++ .+.||+++..+
T Consensus 45 tqGL~~~--~~~LyestG~~g~S~v~~vD~---~Tgkv~~~~~l~------------~~~FgeGit~~-g~~ly~ltw~~ 106 (262)
T 3nol_A 45 TEGFFYR--NGYFYESTGLNGRSSIRKVDI---ESGKTLQQIELG------------KRYFGEGISDW-KDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEE--TTEEEEEEEETTEEEEEEECT---TTCCEEEEEECC------------TTCCEEEEEEE-TTEEEEEESSS
T ss_pred cceEEEE--CCEEEEECCCCCCceEEEEEC---CCCcEEEEEecC------------CccceeEEEEe-CCEEEEEEeeC
Confidence 3899995 5899999864 459999985 577766554221 01244678885 56799999999
Q ss_pred CEEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCc
Q 024317 125 HVIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGS 201 (269)
Q Consensus 125 ~~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~ 201 (269)
+++.++|++.. .++.-. ..++|++. +++.||++|. .++|+.+++....+...-..+
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~-----------------~eG~glt~--dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~- 165 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYD-----------------GEGWGLTH--NDQYLIMSDG-TPVLRFLDPESLTPVRTITVT- 165 (262)
T ss_dssp SEEEEEETTTCCEEEEEECS-----------------SCCCCEEE--CSSCEEECCS-SSEEEEECTTTCSEEEEEECE-
T ss_pred CEEEEEECccCcEEEEEECC-----------------CCceEEec--CCCEEEEECC-CCeEEEEcCCCCeEEEEEEec-
Confidence 99999997643 333211 13467774 4479999995 789999999865443322110
Q ss_pred cCCCcccceeeeeccceeeEEEecCCcEEEEc
Q 024317 202 ALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR 233 (269)
Q Consensus 202 ~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad 233 (269)
..+. .+..++.+... +|.||+..
T Consensus 166 ~~g~--------~~~~lNELe~~-~G~lyan~ 188 (262)
T 3nol_A 166 AHGE--------ELPELNELEWV-DGEIFANV 188 (262)
T ss_dssp ETTE--------ECCCEEEEEEE-TTEEEEEE
T ss_pred cCCc--------cccccceeEEE-CCEEEEEE
Confidence 0010 12334455555 67888877
No 113
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.30 E-value=2.7e-05 Score=69.85 Aligned_cols=77 Identities=3% Similarity=-0.194 Sum_probs=54.0
Q ss_pred CCcceEEEecCCCeEEEEeC---------CCCEEEEEecCCCCCccEEEEEcCC-cccCCCCCcccccCCCCceEEEcCC
Q 024317 45 INPHSVIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESVVKRLAGDG-VQGYSDGEPGSARFDKPKSFAVDMK 114 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~---------~~~~I~~~dl~~~~~g~~~~~~g~g-~~g~~dg~~~~~~~~~P~giavd~~ 114 (269)
..| +++++++...+||+++ ..+.|.+||+ .++++..-+.-+ ... ......|.+++++++
T Consensus 66 ~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~---~T~~vv~~I~v~~~~~-------~~~g~~P~~ia~SpD 134 (368)
T 1mda_H 66 FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP---VTFLPIADIELPDAPR-------FSVGPRVHIIGNCAS 134 (368)
T ss_dssp TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT---TTCCEEEEEEETTSCS-------CCBSCCTTSEEECTT
T ss_pred CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEEC---CCCCEEEEEECCCccc-------cccCCCcceEEEcCC
Confidence 359 9999998889999984 4688999985 455544332111 000 011257999999999
Q ss_pred CC-EEEEeCC-CCEEEE--EeC
Q 024317 115 GN-IYVADKS-NHVIRK--ITN 132 (269)
Q Consensus 115 G~-lyVaD~~-n~~I~~--~~~ 132 (269)
|. +||++.. .+.|.+ +|.
T Consensus 135 Gk~lyVan~~~~~~v~V~~iD~ 156 (368)
T 1mda_H 135 SACLLFFLFGSSAAAGLSVPGA 156 (368)
T ss_dssp SSCEEEEECSSSCEEEEEETTT
T ss_pred CCEEEEEccCCCCeEEEEEEch
Confidence 96 9999975 677777 765
No 114
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.28 E-value=0.00017 Score=62.05 Aligned_cols=118 Identities=12% Similarity=0.140 Sum_probs=77.9
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCC-
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS- 123 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~- 123 (269)
.|.++++++++..+|++...++.|+++|+ .+++.......+.. ....-..|.+++++++|. ||++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~---~t~~~~~~~~~~~~-------~~~~~~~~~~~~~spdg~~l~~~~~~~ 113 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDL---DTCKNTFHANLSSV-------PGEVGRSMYSFAISPDGKEVYATVNPT 113 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEET---TTTEEEEEEESCCS-------TTEEEECSSCEEECTTSSEEEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeC---CCCcEEEEEEcccc-------cccccccccceEECCCCCEEEEEcccc
Confidence 59999998755679999998999999985 45655443321100 000123588999999997 8888843
Q ss_pred ----------CCEEEEEeCCc-c-e---EEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEEC
Q 024317 124 ----------NHVIRKITNLG-V-T---TIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINL 188 (269)
Q Consensus 124 ----------n~~I~~~~~~g-~-~---~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~ 188 (269)
.++|.+++... . . ..... -..+.+++++++ +.||+++ +.|++++.
T Consensus 114 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----------------~~~~~~~~~s~d-g~l~~~~---~~i~~~d~ 173 (349)
T 1jmx_B 114 QRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM----------------PRQVYLMRAADD-GSLYVAG---PDIYKMDV 173 (349)
T ss_dssp EECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC----------------CSSCCCEEECTT-SCEEEES---SSEEEECT
T ss_pred cccccccccCCCeEEEEECCCccccceeeeccC----------------CCcccceeECCC-CcEEEcc---CcEEEEeC
Confidence 57899998543 2 1 11110 124678999998 5588864 34999998
Q ss_pred CCCeE
Q 024317 189 KPEDC 193 (269)
Q Consensus 189 ~~~~~ 193 (269)
.....
T Consensus 174 ~~~~~ 178 (349)
T 1jmx_B 174 KTGKY 178 (349)
T ss_dssp TTCCE
T ss_pred CCCce
Confidence 66543
No 115
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.28 E-value=6.5e-05 Score=67.28 Aligned_cols=113 Identities=10% Similarity=0.058 Sum_probs=75.9
Q ss_pred cCCCeEEEEeC-CCC---EEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCC-----
Q 024317 54 PGSSDLIVLDS-SRS---AFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS----- 123 (269)
Q Consensus 54 ~~~g~lyV~D~-~~~---~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~----- 123 (269)
+....+||+|. +.+ .|.++|. .++++...+..| ..| +|+++++|. +||++..
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~---~t~~~~~~i~~g--------------~~p-~i~~spDg~~lyv~n~~~~~~~ 91 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDA---GSGSILGHVNGG--------------FLP-NPVAAHSGSEFALASTSFSRIA 91 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEEC---CCCeEEEEecCC--------------CCC-CeEECCCCCEEEEEeccccccc
Confidence 34577999997 554 8899985 356554333221 257 999999997 9999852
Q ss_pred ----CCEEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-CCeEEEEECCCCeEE
Q 024317 124 ----NHVIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-NQLIRQINLKPEDCS 194 (269)
Q Consensus 124 ----n~~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-n~~I~~~~~~~~~~~ 194 (269)
.+.|.+||.... .++.-.+... ...-..|.+++++|++..|||+... .+.|..|+ ....+.
T Consensus 92 rg~~~~~v~viD~~t~~~~~~i~~~~~~~---------~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 92 KGKRTDYVEVFDPVTFLPIADIELPDAPR---------FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD 160 (373)
T ss_pred cCCCCCeEEEEECCCCcEEEEEECCCccc---------cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE
Confidence 467899997542 2221100000 0002468999999998899999875 68899999 766544
No 116
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.26 E-value=5.1e-05 Score=67.41 Aligned_cols=156 Identities=14% Similarity=0.094 Sum_probs=96.3
Q ss_pred CCCcceEEE--ecCCC--eEEEEeCCCCEEEEEecCCCCCccEE----EEEcCCcccCCCCCcccccCCCCceEEEcC-C
Q 024317 44 EINPHSVID--RPGSS--DLIVLDSSRSAFYTLSFPLSEESVVK----RLAGDGVQGYSDGEPGSARFDKPKSFAVDM-K 114 (269)
Q Consensus 44 ~~~P~giav--~~~~g--~lyV~D~~~~~I~~~dl~~~~~g~~~----~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~ 114 (269)
+..|+|+|+ ++..+ .+||++.. +++..|++....+|++. .-+.. -..|.++++|+ .
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~l--------------gsq~EgcvvDd~~ 191 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKM--------------NSQTEGMAADDEY 191 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEEC--------------SSCEEEEEEETTT
T ss_pred CCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecC--------------CCCcceEEEcCCC
Confidence 478999999 65556 47888875 78888776433444322 11111 12689999996 6
Q ss_pred CCEEEEeCCCCEEEEEe--CCc--c-eEEecCCCCCCCCCCCcccccccc-CceEEEEeCCC---CEEEEEECCCCeEEE
Q 024317 115 GNIYVADKSNHVIRKIT--NLG--V-TTIAGGGSKKEGRADGPAQNASFS-NDFELTFVPHI---CALLISDHGNQLIRQ 185 (269)
Q Consensus 115 G~lyVaD~~n~~I~~~~--~~g--~-~~~~g~~~~~~~~~~~~~~~~~l~-~P~gia~~~~~---g~LyVaD~~n~~I~~ 185 (269)
|.|||++.. .-|++++ +++ . ..+.-.+. ..|. .|.||++.+.. +.|+|++.+++...+
T Consensus 192 g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~------------g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~V 258 (355)
T 3amr_A 192 GRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADG------------RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAI 258 (355)
T ss_dssp TEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSS------------SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEE
T ss_pred CeEEEeccc-ceEEEEeCCcCCCCCceEEEEecC------------CccccCcceEEEEecCCCCEEEEEEcCCCCEEEE
Confidence 889999986 4599999 444 1 22221111 1143 68999996432 589999999999999
Q ss_pred EECCC--CeEEEecccCcc-----CCCcccceeeeec--cceeeEEEecCC
Q 024317 186 INLKP--EDCSKSSQSGSA-----LGAVSVWVLVSVL--SCLVSLVIGFVA 227 (269)
Q Consensus 186 ~~~~~--~~~~~~~~~g~~-----~g~~~~~~~~~~l--~~p~gia~d~~g 227 (269)
|+.++ ..+..+.....+ ............+ ..|.||.+-.||
T Consensus 259 ydr~~~~~~vg~f~Ig~~~~idgv~eTDG~~v~~~~lG~~fP~Gl~V~qDg 309 (355)
T 3amr_A 259 YDRQGKNKYVADFRITDGPETDGTSDTDGIDVLGFGLGPEYPFGIFVAQDG 309 (355)
T ss_dssp EESSTTCCEEEEEEECCCSSSCCCCSCCCEEEECSCCSTTCTTCEEEEEES
T ss_pred EECCCCCcEEEEEEecCCCCceeeeccCcceEEccccCCCCCCcEEEEecC
Confidence 99964 344444321111 1122222222223 368888887777
No 117
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.23 E-value=0.00017 Score=64.79 Aligned_cols=158 Identities=8% Similarity=0.074 Sum_probs=101.5
Q ss_pred CcceEEEe---cC----CCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCC--------CCcccccCCCCceEE
Q 024317 46 NPHSVIDR---PG----SSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSD--------GEPGSARFDKPKSFA 110 (269)
Q Consensus 46 ~P~giav~---~~----~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~d--------g~~~~~~~~~P~gia 110 (269)
.-.+|+|+ +. ++.+||+|.+...|.++|+ .+|+..++... . -+.+ |... .....-.||+
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl---~~~~swRv~~~-~-~~pd~~~~~~i~G~~~-~~~~Gi~gIa 226 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDH---KKQDSWNVTHP-T-FKAERPTKFDYGGKEY-EFKAGIFGIT 226 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEET---TTTEEEEEECG-G-GSCCSCEEEEETTEEE-EECCCEEEEE
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEEC---CCCcEEEEccC-C-CccccCcceEECCEEe-EeccCceEEE
Confidence 45678886 11 5789999999999999997 45554454421 1 0111 1100 1123567899
Q ss_pred EcCC----C-CEEEEeCCCCEEEEEeC----Cc---c-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEE
Q 024317 111 VDMK----G-NIYVADKSNHVIRKITN----LG---V-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISD 177 (269)
Q Consensus 111 vd~~----G-~lyVaD~~n~~I~~~~~----~g---~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD 177 (269)
++++ + .||+.-....++..+.. +. . ....|... .-....++++|+..|.||+++
T Consensus 227 Lsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg-------------~~s~~~~~~~D~~~G~ly~~~ 293 (381)
T 3q6k_A 227 LGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRG-------------KYNDAIALAYDPKTKVIFFAE 293 (381)
T ss_dssp ECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECC-------------TTCCEEEEEECTTTCEEEEEE
T ss_pred ecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecC-------------CCCCcceEEEeCCCCeEEEEe
Confidence 9886 4 49999988889998862 11 1 22222110 011223677875569999999
Q ss_pred CCCCeEEEEECCC-Ce----EEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCC
Q 024317 178 HGNQLIRQINLKP-ED----CSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHT 235 (269)
Q Consensus 178 ~~n~~I~~~~~~~-~~----~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~ 235 (269)
...+.|.+++.++ .. ....... ..+..|.++++|.+|.|||..+.
T Consensus 294 ~~~~aI~~w~~~~~~~~~~n~~~l~~d-------------~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 294 ANTKQVSCWNTQKMPLRMKNTDVVYTS-------------SRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp SSSSEEEEEETTSCSBCGGGEEEEEEC-------------TTCCSEEEEEECTTSCEEEEECS
T ss_pred ccCCeEEEEeCCCCccccCceEEEEEC-------------CCccccCeEEECCCCeEEEEECc
Confidence 9999999999887 32 1222111 14577999999999999999854
No 118
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.21 E-value=0.00021 Score=67.64 Aligned_cols=165 Identities=7% Similarity=-0.074 Sum_probs=102.7
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEc----CCCC-EE
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVD----MKGN-IY 118 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd----~~G~-ly 118 (269)
...|+++++++++..+||++. .+.|.+||+. ..++++...+..| ..|.+|+++ ++|. +|
T Consensus 196 g~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~-~~t~~~v~~i~~G--------------~~P~~ia~s~~~~pDGk~l~ 259 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIGR-DGKVNMIDLW-MKEPTTVAEIKIG--------------SEARSIETSKMEGWEDKYAI 259 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEET-TSEEEEEETT-SSSCCEEEEEECC--------------SEEEEEEECCSTTCTTTEEE
T ss_pred CCCccceEECCCCCEEEEEcC-CCeEEEEECC-CCCCcEeEEEecC--------------CCCceeEEccccCCCCCEEE
Confidence 346999999987778999984 5789999862 1244443332222 268999999 5886 99
Q ss_pred EEeCCCCEEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEE
Q 024317 119 VADKSNHVIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSK 195 (269)
Q Consensus 119 VaD~~n~~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~ 195 (269)
|+++..+.|.++|.... .++.-.+. ..... .. ..-..+.+|..+++...++|+-...++|+.++........
T Consensus 260 v~n~~~~~v~ViD~~t~~~~~~i~~~~~-~~~~~-~~---~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~ 334 (567)
T 1qks_A 260 AGAYWPPQYVIMDGETLEPKKIQSTRGM-TYDEQ-EY---HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK 334 (567)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECCEE-CTTTC-CE---ESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE
T ss_pred EEEccCCeEEEEECCCCcEEEEEecccc-ccccc-cc---cCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce
Confidence 99999999999996443 22321110 00000 00 0011456788888767788888888999999976542211
Q ss_pred ecccCccCCCcccceeeeeccceeeEEEecCCc-EEEEc-CCCCccccc
Q 024317 196 SSQSGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIR-HTGRLDPPL 242 (269)
Q Consensus 196 ~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad-~~g~~~~~~ 242 (269)
.... . .-..|+++.++++|+ +||++ ..+.+...+
T Consensus 335 v~~i--~-----------~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD 370 (567)
T 1qks_A 335 TTEI--S-----------AERFLHDGGLDGSHRYFITAANARNKLVVID 370 (567)
T ss_dssp EEEE--E-----------CCSSEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred eeee--e-----------ccccccCceECCCCCEEEEEeCCCCeEEEEE
Confidence 1111 0 014578889999995 56766 344554433
No 119
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.21 E-value=3e-05 Score=68.87 Aligned_cols=112 Identities=12% Similarity=0.114 Sum_probs=77.0
Q ss_pred CCeEEEEeCC-----CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC-------
Q 024317 56 SSDLIVLDSS-----RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK------- 122 (269)
Q Consensus 56 ~g~lyV~D~~-----~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~------- 122 (269)
...+||+|.+ .+.|+++|. .++++...+..+ ..| +|+++++|. +||++.
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~---~t~~~~~~i~~g--------------~~p-~i~~spdg~~lyv~~~~~~~~~~ 76 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDY---TNGKFLGMVPTA--------------FNG-HVQVSNDGKKIYTMTTYHERITR 76 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEET---TTCCEEEEEECC--------------EEE-EEEECTTSSEEEEEEEEETTSSS
T ss_pred CCEEEEECCCCCccccCeEEEEEC---CCCeEEEEecCC--------------CCC-ceEECCCCCEEEEEEeccccccc
Confidence 4689999864 458999984 456654433221 257 999999997 999984
Q ss_pred --CCCEEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-CCeEEEEECCCCeEEE
Q 024317 123 --SNHVIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-NQLIRQINLKPEDCSK 195 (269)
Q Consensus 123 --~n~~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-n~~I~~~~~~~~~~~~ 195 (269)
..+.|.+||... + .++.-.... ...-..|.+|+++|++..|||++.. .+.|.+|+.+...+..
T Consensus 77 g~~~~~v~v~d~~t~~~~~~i~~~~~~----------~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~ 145 (361)
T 2oiz_A 77 GKRSDVVEVWDADKLTFEKEISLPPKR----------VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVE 145 (361)
T ss_dssp SCEEEEEEEEETTTCCEEEEEEECTTB----------CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEE
T ss_pred CCCCCEEEEEECcCCcEEEEEEcCccc----------cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEE
Confidence 245799999653 2 233211000 0012579999999998899999975 6899999998876543
No 120
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.19 E-value=7.3e-05 Score=68.35 Aligned_cols=80 Identities=6% Similarity=-0.155 Sum_probs=57.1
Q ss_pred CCcceEEEecCCCeEEEEeC---------CCCEEEEEecCCCCCccEEEEEcCC-cccCCCCCcccccCCCCceEEEcCC
Q 024317 45 INPHSVIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESVVKRLAGDG-VQGYSDGEPGSARFDKPKSFAVDMK 114 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~---------~~~~I~~~dl~~~~~g~~~~~~g~g-~~g~~dg~~~~~~~~~P~giavd~~ 114 (269)
..| +|++++++..+||+++ ..+.|.+||. .++++...+--+ ... ......|.+++++++
T Consensus 119 ~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~---~t~~vv~~I~v~g~~r-------~~~g~~P~~~~~spD 187 (426)
T 3c75_H 119 FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP---VTFLPIADIELPDAPR-------FLVGTYQWMNALTPD 187 (426)
T ss_dssp SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETTCCC-------CCBSCCGGGSEECTT
T ss_pred CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC---CCCcEEEEEECCCccc-------cccCCCcceEEEcCC
Confidence 469 9999998889999986 3567999984 455544332111 000 001257999999999
Q ss_pred CC-EEEEeCC-CCEEEEEeCCcc
Q 024317 115 GN-IYVADKS-NHVIRKITNLGV 135 (269)
Q Consensus 115 G~-lyVaD~~-n~~I~~~~~~g~ 135 (269)
|. +||++.. .+.|.++|....
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTT
T ss_pred CCEEEEEecCCCCeEEEEECCCC
Confidence 97 9999975 789999997554
No 121
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.16 E-value=8.9e-05 Score=69.70 Aligned_cols=106 Identities=7% Similarity=-0.064 Sum_probs=80.0
Q ss_pred EecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCCCCEEEEE
Q 024317 52 DRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSNHVIRKI 130 (269)
Q Consensus 52 v~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~n~~I~~~ 130 (269)
+++ ++.+||+....+.|..+|. .++++...+..+ . .|.+++++++|+ ||+++.. +.|.++
T Consensus 145 ~~p-~~~~~vs~~~d~~V~v~D~---~t~~~~~~i~~g-------------~-~~~~v~~spdg~~l~v~~~d-~~V~v~ 205 (543)
T 1nir_A 145 LDL-PNLFSVTLRDAGQIALVDG---DSKKIVKVIDTG-------------Y-AVHISRMSASGRYLLVIGRD-ARIDMI 205 (543)
T ss_dssp CCG-GGEEEEEEGGGTEEEEEET---TTCCEEEEEECS-------------T-TEEEEEECTTSCEEEEEETT-SEEEEE
T ss_pred cCC-CCEEEEEEcCCCeEEEEEC---CCceEEEEEecC-------------c-ccceEEECCCCCEEEEECCC-CeEEEE
Confidence 554 7899999999999999984 466655443221 1 378999999997 9999986 899999
Q ss_pred eCC---cc--eEEecCCCCCCCCCCCccccccccCceEEEEeC----CCCEEEEEECCCCeEEEEECCCCeE
Q 024317 131 TNL---GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVP----HICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 131 ~~~---g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~----~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
|.+ +. .++.. -..|.+++++| ++..|||++...+.|..++......
T Consensus 206 D~~~~t~~~~~~i~~-----------------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 206 DLWAKEPTKVAEIKI-----------------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 260 (543)
T ss_dssp ETTSSSCEEEEEEEC-----------------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred ECcCCCCcEEEEEec-----------------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc
Confidence 983 32 22221 13589999999 8789999998888999999766543
No 122
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.14 E-value=7.7e-05 Score=68.93 Aligned_cols=182 Identities=14% Similarity=0.088 Sum_probs=102.2
Q ss_pred CCcEEEEEecCccCCCCcceEEEecCC-CeEEEEeCCCCEEEEEecCCCCCccE--EEEEcCCcccCCCCCcccccCCCC
Q 024317 30 DGYTVTTVIDGHQLEINPHSVIDRPGS-SDLIVLDSSRSAFYTLSFPLSEESVV--KRLAGDGVQGYSDGEPGSARFDKP 106 (269)
Q Consensus 30 ~g~~~~~~~~g~~~~~~P~giav~~~~-g~lyV~D~~~~~I~~~dl~~~~~g~~--~~~~g~g~~g~~dg~~~~~~~~~P 106 (269)
.|+.++.+.++ |..|.+|++.|++ +++||++. .++|++++ .+|.. ..+.+... .+..+. .......+
T Consensus 2 ~gf~v~~va~g---L~~P~~~a~~pdG~~rl~V~er-~G~i~~~~----~~g~~~~~~~~~~~~-~~~~g~-~~~~e~Gl 71 (463)
T 2wg3_C 2 NCFCIQEVVSG---LRQPVGALHSGDGSQRLFILEK-EGYVKILT----PEGEIFKEPYLDIHK-LVQSGI-KGGDERGL 71 (463)
T ss_dssp CCEEEEEEEEE---ESSEEEEECCSSSSCCEEEEET-TTEEEEEC----TTSCBCSSCSEECTT-TBCCCC-SSSCCCSE
T ss_pred CceEEEEeccC---CCCceEEEECCCCCeEEEEEeC-CceEEEEe----CCCCeeeeeecCCcc-eeccCc-cccCCCcc
Confidence 46677777653 6799999997643 25999997 57899884 33321 11111100 011110 00112356
Q ss_pred ceEEEcCC----CCEEEEeCCC------------CEEEEEeCCc---------c-eEEecCCCCCCCCCCCccccccccC
Q 024317 107 KSFAVDMK----GNIYVADKSN------------HVIRKITNLG---------V-TTIAGGGSKKEGRADGPAQNASFSN 160 (269)
Q Consensus 107 ~giavd~~----G~lyVaD~~n------------~~I~~~~~~g---------~-~~~~g~~~~~~~~~~~~~~~~~l~~ 160 (269)
.||+++++ +.|||+-+.. ++|.++.... . ..+..... ...-..
T Consensus 72 lgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~-----------~~~~H~ 140 (463)
T 2wg3_C 72 LSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAE-----------LHRKHL 140 (463)
T ss_dssp EEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEE-----------SSSSSC
T ss_pred eeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCC-----------CCCccc
Confidence 79999985 8899986421 4777776321 1 22322110 011244
Q ss_pred ceEEEEeCCCCEEEEEEC--C---------------CCeEEEEECCCCeE-----EEecccCccC---CCcccceeeeec
Q 024317 161 DFELTFVPHICALLISDH--G---------------NQLIRQINLKPEDC-----SKSSQSGSAL---GAVSVWVLVSVL 215 (269)
Q Consensus 161 P~gia~~~~~g~LyVaD~--~---------------n~~I~~~~~~~~~~-----~~~~~~g~~~---g~~~~~~~~~~l 215 (269)
-..|+++|+ |.|||+-. + .+.|+|+++++... .-...+ +.. .....|+. .+
T Consensus 141 g~~l~fgpD-G~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNP-f~~~~~~~~eI~a~--G~ 216 (463)
T 2wg3_C 141 GGQLLFGPD-GFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNP-HFNSTNQPPEVFAH--GL 216 (463)
T ss_dssp EEEEEECTT-SCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTST-TTTCSSSCTTEEEE--CC
T ss_pred CCcEeECCC-CcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCC-CcCCCCCcccEEEE--CC
Confidence 568999998 89999843 2 35699999887421 000111 010 12234443 35
Q ss_pred cceeeEEEecC-----C--cEEEEcCCC
Q 024317 216 SCLVSLVIGFV-----A--RPYIIRHTG 236 (269)
Q Consensus 216 ~~p~gia~d~~-----g--~lyVad~~g 236 (269)
-.|.|+++|+. | .+|++|..|
T Consensus 217 RNp~gla~dp~tg~~~G~l~~~~~D~~G 244 (463)
T 2wg3_C 217 HDPGRCAVDRHPTDININLTILCSDSNG 244 (463)
T ss_dssp SSCCBEEEESSCSSTTCSEEEEEECC--
T ss_pred CCcceEEECCCCCCcccceEEEecccCC
Confidence 77999999997 5 577788633
No 123
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.14 E-value=4.2e-05 Score=68.61 Aligned_cols=107 Identities=7% Similarity=-0.074 Sum_probs=76.0
Q ss_pred CCeEEEEeCCCC----EEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC--------
Q 024317 56 SSDLIVLDSSRS----AFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK-------- 122 (269)
Q Consensus 56 ~g~lyV~D~~~~----~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~-------- 122 (269)
...+||++...+ +|..+|. .++++...+..| ..| +++++++|. +||+++
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~---~t~~v~~~i~vG--------------~~P-~i~~spDg~~lyVan~~~~r~~~G 92 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCA---GCGVTLGHSLGA--------------FLS-LAVAGHSGSDFALASTSFARSAKG 92 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEET---TTTEEEEEEEEC--------------TTC-EEEECTTSSCEEEEEEEETTTTSS
T ss_pred CCeEEEECCccCCccceEEEEEC---CCCeEEEEEeCC--------------CCC-ceEECCCCCEEEEEcccccccccC
Confidence 478999999888 8999985 455554443222 258 999999887 999994
Q ss_pred -CCCEEEEEeCCcc---eEEe-cCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-CCeEEE--EECCC
Q 024317 123 -SNHVIRKITNLGV---TTIA-GGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-NQLIRQ--INLKP 190 (269)
Q Consensus 123 -~n~~I~~~~~~g~---~~~~-g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-n~~I~~--~~~~~ 190 (269)
..+.|.+||.... .++. +.+. . ......|.+++++|++..|||++.. .+.|.. ++...
T Consensus 93 ~~~~~VsviD~~T~~vv~~I~v~~~~-~---------~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 93 KRTDYVEVFDPVTFLPIADIELPDAP-R---------FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTSC-S---------CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCCEEEEEECCCCCEEEEEECCCcc-c---------cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 3678999997543 3332 2110 0 0113579999999998899999975 577888 77655
No 124
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.10 E-value=0.00016 Score=62.02 Aligned_cols=101 Identities=14% Similarity=0.102 Sum_probs=68.6
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeCCcc-e-EEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCe
Q 024317 105 KPKSFAVDMKGNIYVADKSNHVIRKITNLGV-T-TIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQL 182 (269)
Q Consensus 105 ~P~giavd~~G~lyVaD~~n~~I~~~~~~g~-~-~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~ 182 (269)
....++++++|+||++.. ++.+.+++++|. . .+... -..+..++++++ ++|||+.. ++.
T Consensus 216 ~~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~----------------~~~~~~~~~~~~-g~l~v~t~-~gg 276 (330)
T 3hxj_A 216 TVTRPAISEDGTIYVTSL-DGHLYAINPDGTEKWRFKTG----------------KRIESSPVIGNT-DTIYFGSY-DGH 276 (330)
T ss_dssp CCSCCEECTTSCEEEEET-TTEEEEECTTSCEEEEEECS----------------SCCCSCCEECTT-SCEEEECT-TCE
T ss_pred ceeceEECCCCeEEEEcC-CCeEEEECCCCCEeEEeeCC----------------CCccccceEcCC-CeEEEecC-CCC
Confidence 456789999999999986 568888888776 2 22111 012334566655 89999876 457
Q ss_pred EEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCcc
Q 024317 183 IRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRLD 239 (269)
Q Consensus 183 I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~~ 239 (269)
|.+++.++......... + .....+++|.+|+|||+..+|.+.
T Consensus 277 l~~~d~~g~~~~~~~~~----~-----------~~~~~~~~d~~g~l~~gt~~G~~~ 318 (330)
T 3hxj_A 277 LYAINPDGTEKWNFETG----S-----------WIIATPVIDENGTIYFGTRNGKFY 318 (330)
T ss_dssp EEEECTTSCEEEEEECS----S-----------CCCSCCEECTTCCEEEECTTSCEE
T ss_pred EEEECCCCcEEEEEEcC----C-----------ccccceEEcCCCEEEEEcCCCeEE
Confidence 99999876655443221 1 224467888999999999887665
No 125
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.07 E-value=0.00025 Score=67.13 Aligned_cols=104 Identities=8% Similarity=-0.065 Sum_probs=78.9
Q ss_pred CCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCCCCEEEEEeCC-
Q 024317 56 SSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSNHVIRKITNL- 133 (269)
Q Consensus 56 ~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~n~~I~~~~~~- 133 (269)
.+.+||+....+.|..+|. .++++...+..| ..|.+++++++|. +||++. .+.|.+||..
T Consensus 166 ~~~~~V~~~~~~~V~viD~---~t~~v~~~i~~g--------------~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~ 227 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDG---STYEIKTVLDTG--------------YAVHISRLSASGRYLFVIGR-DGKVNMIDLWM 227 (567)
T ss_dssp GGEEEEEETTTTEEEEEET---TTCCEEEEEECS--------------SCEEEEEECTTSCEEEEEET-TSEEEEEETTS
T ss_pred CceEEEEeCCCCeEEEEEC---CCCeEEEEEeCC--------------CCccceEECCCCCEEEEEcC-CCeEEEEECCC
Confidence 5789999999999999984 466655544332 2688999999998 899985 6799999984
Q ss_pred --cc--eEEecCCCCCCCCCCCccccccccCceEEEEe----CCCCEEEEEECCCCeEEEEECCCCeEE
Q 024317 134 --GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFV----PHICALLISDHGNQLIRQINLKPEDCS 194 (269)
Q Consensus 134 --g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~----~~~g~LyVaD~~n~~I~~~~~~~~~~~ 194 (269)
++ .++.. -..|.+|+++ |++..+||++...+.|..++.......
T Consensus 228 ~t~~~v~~i~~-----------------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~ 279 (567)
T 1qks_A 228 KEPTTVAEIKI-----------------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 279 (567)
T ss_dssp SSCCEEEEEEC-----------------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE
T ss_pred CCCcEeEEEec-----------------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEE
Confidence 22 22211 1358999999 587799999999999999997665443
No 126
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.05 E-value=0.00027 Score=63.71 Aligned_cols=80 Identities=9% Similarity=-0.050 Sum_probs=56.1
Q ss_pred CCCcceEEEecCCCeEEEEeC---------CCCEEEEEecCCCCCccEEEEE--cCCcccCCCCCcccccCCCCceEEEc
Q 024317 44 EINPHSVIDRPGSSDLIVLDS---------SRSAFYTLSFPLSEESVVKRLA--GDGVQGYSDGEPGSARFDKPKSFAVD 112 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~---------~~~~I~~~dl~~~~~g~~~~~~--g~g~~g~~dg~~~~~~~~~P~giavd 112 (269)
...|. ++++|++..+||+++ ..+.|.+||. .++++...+ +.|.. ...-..|.+++++
T Consensus 78 G~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~---~t~~v~~~I~v~~g~r--------~~~g~~P~~~a~s 145 (386)
T 3sjl_D 78 GFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP---VTLLPTADIELPDAPR--------FLVGTYPWMTSLT 145 (386)
T ss_dssp CSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETTCCC--------CCBSCCGGGEEEC
T ss_pred CCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC---CCCeEEEEEECCCccc--------cccCCCCceEEEc
Confidence 34585 999988889999985 2467999984 455544332 21110 0112489999999
Q ss_pred CCCC-EEEEeCC-CCEEEEEeCCcc
Q 024317 113 MKGN-IYVADKS-NHVIRKITNLGV 135 (269)
Q Consensus 113 ~~G~-lyVaD~~-n~~I~~~~~~g~ 135 (269)
++|. +||++.. .+.|.++|....
T Consensus 146 pDGk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 146 PDGKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp TTSSEEEEEECSSSCEEEEEETTTT
T ss_pred CCCCEEEEEEcCCCCeEEEEECCCC
Confidence 9998 9999974 789999996543
No 127
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.02 E-value=0.0011 Score=59.47 Aligned_cols=168 Identities=11% Similarity=0.019 Sum_probs=101.2
Q ss_pred ccCCCCcceEEEecCCCeEEEEeCCC---------------CEEEEEecCCCCC--ccEEEEEcCCcccCCCCCcccccC
Q 024317 41 HQLEINPHSVIDRPGSSDLIVLDSSR---------------SAFYTLSFPLSEE--SVVKRLAGDGVQGYSDGEPGSARF 103 (269)
Q Consensus 41 ~~~~~~P~giav~~~~g~lyV~D~~~---------------~~I~~~dl~~~~~--g~~~~~~g~g~~g~~dg~~~~~~~ 103 (269)
...|.+..++.++ ..++|||.|++. -+|..+|+ ..+ ..+.++. -...-. . .-
T Consensus 83 ~~~lvsV~~v~iD-~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL--~t~~~~li~~y~-~p~~~~-----~--~~ 151 (381)
T 3q6k_A 83 GKELTSIYQPVID-DCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDL--KQPNYPEVVRYY-FPTRLV-----E--KP 151 (381)
T ss_dssp SCSSSCEEEEEEC-TTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEES--SSTTCCEEEEEE-CCGGGC-----C--CG
T ss_pred ccceEEeeEEEEc-CCCcEEEEeCCCcCcCCCccccCCCCCceEEEEEC--CCCCceeEEEEE-CCHHhc-----c--cC
Confidence 3468889999995 699999999862 26888988 344 3344432 211000 0 01
Q ss_pred CCCceEEEc-C-------CCCEEEEeCCCCEEEEEeC-Ccc-eEEecCCCCCCCCCCCc-cccc-cc---cCceEEEEeC
Q 024317 104 DKPKSFAVD-M-------KGNIYVADKSNHVIRKITN-LGV-TTIAGGGSKKEGRADGP-AQNA-SF---SNDFELTFVP 168 (269)
Q Consensus 104 ~~P~giavd-~-------~G~lyVaD~~n~~I~~~~~-~g~-~~~~g~~~~~~~~~~~~-~~~~-~l---~~P~gia~~~ 168 (269)
..-.+|+|| . ++.+||+|.....|.++|. +|+ .++.... ..+. ..+. ...+ .| ..-.|||++|
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~-~~pd-~~~~~~i~G~~~~~~~Gi~gIaLsp 229 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT-FKAE-RPTKFDYGGKEYEFKAGIFGITLGD 229 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG-GSCC-SCEEEEETTEEEEECCCEEEEEECC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC-Cccc-cCcceEECCEEeEeccCceEEEecC
Confidence 244679998 2 3559999999999999995 455 4444211 1111 0000 0000 11 3568999999
Q ss_pred C----CCEEEEEECCCCeEEEEECC---CC----eEEEecccCccCCCcccceeeeeccceeeEEEe-cCCcEEEEcC
Q 024317 169 H----ICALLISDHGNQLIRQINLK---PE----DCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIG-FVARPYIIRH 234 (269)
Q Consensus 169 ~----~g~LyVaD~~n~~I~~~~~~---~~----~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d-~~g~lyVad~ 234 (269)
+ +..||+.-..+.+++++... .. .+...+..+ ..+...++++| .+|+||+++.
T Consensus 230 ~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg-------------~~s~~~~~~~D~~~G~ly~~~~ 294 (381)
T 3q6k_A 230 RDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRG-------------KYNDAIALAYDPKTKVIFFAEA 294 (381)
T ss_dssp CCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECC-------------TTCCEEEEEECTTTCEEEEEES
T ss_pred CcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecC-------------CCCCcceEEEeCCCCeEEEEec
Confidence 7 67999999998899999732 11 111111110 00223467887 8899999993
No 128
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.01 E-value=0.0008 Score=59.68 Aligned_cols=132 Identities=13% Similarity=0.097 Sum_probs=80.2
Q ss_pred CCcEEEEEecCccCCCCcceEEEecC---CC----eEEEEeCC--CCEEEEEecCCCCCccEEEEEcCCcccCCCCCccc
Q 024317 30 DGYTVTTVIDGHQLEINPHSVIDRPG---SS----DLIVLDSS--RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGS 100 (269)
Q Consensus 30 ~g~~~~~~~~g~~~~~~P~giav~~~---~g----~lyV~D~~--~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~ 100 (269)
+|.++..+. ...+++|.+-+. +| .+|+++.. +++|..|+++. .++.+..+ +... .+..
T Consensus 58 ~G~~l~~~~-----~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp-~~~~l~~i-~~~~------~pv~ 124 (355)
T 3amr_A 58 DGKMLHSYN-----TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG-KNGTLQSM-TDPD------HPIA 124 (355)
T ss_dssp TSCEEEEEC-----CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECT-TTCCEEEC-SCTT------SCEE
T ss_pred CCcEEEEcc-----CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECC-CCCceeec-cccc------cCcC
Confidence 455555542 235677776431 11 46999998 99998886631 23444443 1100 0111
Q ss_pred ccCCCCceEEE--cCC-CC--EEEEeCCCCEEEEEe----CCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCC
Q 024317 101 ARFDKPKSFAV--DMK-GN--IYVADKSNHVIRKIT----NLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPH 169 (269)
Q Consensus 101 ~~~~~P~giav--d~~-G~--lyVaD~~n~~I~~~~----~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~ 169 (269)
..+..|.|+|+ ++. |. +||.+.. +++..+. .+|. ......-. .-..|.++++|++
T Consensus 125 t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~-------------lgsq~EgcvvDd~ 190 (355)
T 3amr_A 125 TAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFK-------------MNSQTEGMAADDE 190 (355)
T ss_dssp CCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEE-------------CSSCEEEEEEETT
T ss_pred CCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEec-------------CCCCcceEEEcCC
Confidence 33579999999 774 53 8888875 6776643 3442 22211100 0136889999998
Q ss_pred CCEEEEEECCCCeEEEEECC
Q 024317 170 ICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 170 ~g~LyVaD~~n~~I~~~~~~ 189 (269)
.+.|||++...+ ||+|+.+
T Consensus 191 ~g~Lyv~eEd~G-Iw~~da~ 209 (355)
T 3amr_A 191 YGRLYIAEEDEA-IWKFSAE 209 (355)
T ss_dssp TTEEEEEETTTE-EEEEECS
T ss_pred CCeEEEecccce-EEEEeCC
Confidence 899999999855 9999965
No 129
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.93 E-value=2.7e-05 Score=73.67 Aligned_cols=158 Identities=15% Similarity=0.035 Sum_probs=100.0
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCC---------CCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPL---------SEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG 115 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~---------~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G 115 (269)
..|+|+.++|++..+||++...++|.++|... +.+..+....- .=..|..+++|++|
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--------------vG~gP~h~aF~~dG 342 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--------------LGLGPLHTAFDGRG 342 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--------------CCSCEEEEEECTTS
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--------------CCCCcceEEECCCC
Confidence 47999999998889999999999999998631 00111221111 11379999999999
Q ss_pred CEEEEeCCCCEEEEEeCCcc-eEEecCCCCCC-CCCCCccccccccCceEEEEeCCCCEEEEEECCC-CeE---------
Q 024317 116 NIYVADKSNHVIRKITNLGV-TTIAGGGSKKE-GRADGPAQNASFSNDFELTFVPHICALLISDHGN-QLI--------- 183 (269)
Q Consensus 116 ~lyVaD~~n~~I~~~~~~g~-~~~~g~~~~~~-~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n-~~I--------- 183 (269)
++|++....+.|.+++-+.- ..+.|...... ...+.....+..+...|+++++++..||+++... +|+
T Consensus 343 ~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~ 422 (595)
T 1fwx_A 343 NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPE 422 (595)
T ss_dssp EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCE
T ss_pred eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCC
Confidence 99999999999999985431 11111000000 0000000011233446788889988999999987 777
Q ss_pred --EEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcE
Q 024317 184 --RQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARP 229 (269)
Q Consensus 184 --~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~l 229 (269)
+.|+..++........ .....|+..++++...|
T Consensus 423 ~~ql~dis~~~m~lv~d~-------------p~~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 423 NDQLIDISGDKMVLVHDG-------------PTFAEPHDAIAVHPSIL 457 (595)
T ss_dssp EEEEEECSSSSCEEEEEE-------------EESSCCCCEEEECTTTT
T ss_pred cceEEEcCCCcEEEEEEE-------------cCCCCCCceEEccHHHc
Confidence 7777765544333222 13367888888887755
No 130
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.84 E-value=0.00062 Score=58.27 Aligned_cols=141 Identities=13% Similarity=0.078 Sum_probs=83.9
Q ss_pred eEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCEEE
Q 024317 49 SVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHVIR 128 (269)
Q Consensus 49 giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~I~ 128 (269)
.++++ .++.+||... ++.|+++| .+|+....... .-.....+++|++|+|||+. +.|.
T Consensus 141 ~~~~~-~~g~l~vgt~-~~~l~~~d----~~g~~~~~~~~-------------~~~~~~~~~~d~~g~l~v~t---~~l~ 198 (330)
T 3hxj_A 141 TPIVS-EDGTIYVGSN-DNYLYAIN----PDGTEKWRFKT-------------NDAITSAASIGKDGTIYFGS---DKVY 198 (330)
T ss_dssp CCEEC-TTSCEEEECT-TSEEEEEC----TTSCEEEEEEC-------------SSCCCSCCEECTTCCEEEES---SSEE
T ss_pred eeEEc-CCCEEEEEcC-CCEEEEEC----CCCCEeEEEec-------------CCCceeeeEEcCCCEEEEEe---CEEE
Confidence 34452 3666777653 35666664 22544332211 01234567888899999988 6788
Q ss_pred EEeCCcceEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccCCCccc
Q 024317 129 KITNLGVTTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSALGAVSV 208 (269)
Q Consensus 129 ~~~~~g~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g~~~~ 208 (269)
+++++|...+.-... -.....++++++ |.|||+.. ++.|.+++.++......... .
T Consensus 199 ~~d~~g~~~~~~~~~--------------~~~~~~~~~~~~-g~l~v~t~-~~gl~~~~~~g~~~~~~~~~----~---- 254 (330)
T 3hxj_A 199 AINPDGTEKWNFYAG--------------YWTVTRPAISED-GTIYVTSL-DGHLYAINPDGTEKWRFKTG----K---- 254 (330)
T ss_dssp EECTTSCEEEEECCS--------------SCCCSCCEECTT-SCEEEEET-TTEEEEECTTSCEEEEEECS----S----
T ss_pred EECCCCcEEEEEccC--------------CcceeceEECCC-CeEEEEcC-CCeEEEECCCCCEeEEeeCC----C----
Confidence 888777622211100 123567787876 89999986 45788898777765443322 0
Q ss_pred ceeeeeccceeeEEEecCCcEEEEcCCCCccccc
Q 024317 209 WVLVSVLSCLVSLVIGFVARPYIIRHTGRLDPPL 242 (269)
Q Consensus 209 ~~~~~~l~~p~gia~d~~g~lyVad~~g~~~~~~ 242 (269)
..+..++++.+|+|||+...|.+...+
T Consensus 255 -------~~~~~~~~~~~g~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 255 -------RIESSPVIGNTDTIYFGSYDGHLYAIN 281 (330)
T ss_dssp -------CCCSCCEECTTSCEEEECTTCEEEEEC
T ss_pred -------CccccceEcCCCeEEEecCCCCEEEEC
Confidence 112345677788888888776555443
No 131
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.81 E-value=0.0003 Score=66.69 Aligned_cols=122 Identities=11% Similarity=0.138 Sum_probs=78.9
Q ss_pred cCCCCcceEEEecCCCeEEEEeCCC---------------------CEEEEEecCCC----CCccEEEEEcCCcccCC--
Q 024317 42 QLEINPHSVIDRPGSSDLIVLDSSR---------------------SAFYTLSFPLS----EESVVKRLAGDGVQGYS-- 94 (269)
Q Consensus 42 ~~~~~P~giav~~~~g~lyV~D~~~---------------------~~I~~~dl~~~----~~g~~~~~~g~g~~g~~-- 94 (269)
..|..|++|++++.++.+||+-+.+ +.|++++..-. ...+...+.-.+.+...
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 4678999999988899999997643 46888864211 11122222222221111
Q ss_pred ------CCCcccccCCCCceEEEcCCCCEEEEeC------------CCCEEEEEeCC-cc-eEEecCCCCCCCCCCCccc
Q 024317 95 ------DGEPGSARFDKPKSFAVDMKGNIYVADK------------SNHVIRKITNL-GV-TTIAGGGSKKEGRADGPAQ 154 (269)
Q Consensus 95 ------dg~~~~~~~~~P~giavd~~G~lyVaD~------------~n~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~ 154 (269)
........|+.|..|++|++|+|||+.- +|+.++..++. |+ ..++.....
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g---------- 530 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---------- 530 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT----------
T ss_pred cccccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC----------
Confidence 1112245699999999999999999864 35788888864 55 665543211
Q ss_pred cccccCceEEEEeCCCCEEEEEE
Q 024317 155 NASFSNDFELTFVPHICALLISD 177 (269)
Q Consensus 155 ~~~l~~P~gia~~~~~g~LyVaD 177 (269)
....|++++|++..|||.=
T Consensus 531 ----aE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 531 ----CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp ----CEEEEEEECTTSSEEEEEE
T ss_pred ----ccCcCeeECCCCCEEEEEE
Confidence 2357999999977888863
No 132
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.80 E-value=0.00054 Score=56.90 Aligned_cols=151 Identities=15% Similarity=0.135 Sum_probs=89.5
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCC-------ccEEEEEcC-CcccCCCCCcccccCCCCceEEEcCCC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-------SVVKRLAGD-GVQGYSDGEPGSARFDKPKSFAVDMKG 115 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~-------g~~~~~~g~-g~~g~~dg~~~~~~~~~P~giavd~~G 115 (269)
+.+-..+++.| +|.||.. .++.+++++. ++ +. .+.+|. |..+ =..+.+|++|
T Consensus 40 w~~~~~laf~P-~G~LYaV--~~G~Ly~~~~---~t~~~~~W~~s-~t~IG~~Gw~~-------------F~a~~fD~~G 99 (236)
T 1tl2_A 40 WSNFKFLFLSP-GGELYGV--LNDKIYKGTP---PTHDNDNWMGR-AKKIGNGGWNQ-------------FQFLFFDPNG 99 (236)
T ss_dssp CTTCSEEEECT-TSCEEEE--ETTEEEEESC---CCSTTCCHHHH-CEEEECSCGGG-------------CSEEEECTTS
T ss_pred cccceeEEECC-CccEEEE--eCCeEEEECC---CCCCccccccc-ccEeccccccc-------------ceEEEECCCC
Confidence 55778999987 9999999 5678999963 23 33 344443 2211 2469999999
Q ss_pred CEEEEeCCCCEEEEEeC--CcceEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 116 NIYVADKSNHVIRKITN--LGVTTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 116 ~lyVaD~~n~~I~~~~~--~g~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
.||+. .+++|+++++ ++...+.+....- + ......-..|.++|+ |.||.+. ++++++-.+-.+
T Consensus 100 ~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~v-g-------~~gw~~~~~lff~p~-G~Lyav~--dg~lyr~~~P~~-- 164 (236)
T 1tl2_A 100 YLYAV--SKDKLYKASPPQSDTDNWIARATEV-G-------SGGWSGFKFLFFHPN-GYLYAVH--GQQFYKALPPVS-- 164 (236)
T ss_dssp CEEEE--ETTEEEEESCCCSTTCCHHHHSEEE-E-------CSSGGGEEEEEECTT-SCEEEEE--TTEEEEECCCSS--
T ss_pred CEEEe--CCCEEEEeCCCcCCCCceeccccEe-c-------cCCCCceEEEEECCC-ceEEEEe--CCcEEecCCCCC--
Confidence 99999 3589999986 4332222221000 0 000222378999998 9999888 466765432211
Q ss_pred EEecccCccCCCcccceee-e-----eccceeeEEEecCCcEEEEcCCCCcccc
Q 024317 194 SKSSQSGSALGAVSVWVLV-S-----VLSCLVSLVIGFVARPYIIRHTGRLDPP 241 (269)
Q Consensus 194 ~~~~~~g~~~g~~~~~~~~-~-----~l~~p~gia~d~~g~lyVad~~g~~~~~ 241 (269)
....|... . ....-.=+.++++|+||.+. +|++...
T Consensus 165 -----------~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~-~g~~Y~~ 206 (236)
T 1tl2_A 165 -----------NQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ-GGKFYED 206 (236)
T ss_dssp -----------TTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred -----------CCcccccccceeccCCcceEEEEEECCCCcEEEEe-CCeEEec
Confidence 11111000 0 00112226689999999998 7776643
No 133
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.72 E-value=0.013 Score=50.60 Aligned_cols=144 Identities=13% Similarity=0.142 Sum_probs=87.2
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
....++++| ++..+++-...+.|..+++ .+++ ...+.+. -.....++++++|+++++-...
T Consensus 124 ~~~~~~~sp-dg~~l~~g~~dg~v~i~~~---~~~~~~~~~~~~--------------~~~v~~~~~spdg~~lasg~~d 185 (321)
T 3ow8_A 124 DAWTLAFSP-DSQYLATGTHVGKVNIFGV---ESGKKEYSLDTR--------------GKFILSIAYSPDGKYLASGAID 185 (321)
T ss_dssp CCCCEEECT-TSSEEEEECTTSEEEEEET---TTCSEEEEEECS--------------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECC-CCCEEEEEcCCCcEEEEEc---CCCceeEEecCC--------------CceEEEEEECCCCCEEEEEcCC
Confidence 345688865 6666677677788888875 2333 2222211 1234679999999977777677
Q ss_pred CEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCc
Q 024317 125 HVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGS 201 (269)
Q Consensus 125 ~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~ 201 (269)
+.|+.+|.. ++ ..+.+. -.....++++|+ +.++++-...+.|+.++............
T Consensus 186 g~i~iwd~~~~~~~~~~~~h----------------~~~v~~l~~spd-~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-- 246 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEGH----------------AMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSG-- 246 (321)
T ss_dssp SCEEEEETTTTEEEEEECCC----------------SSCCCEEEECTT-SCEEEEECTTSCEEEEETTTCCEEEEECC--
T ss_pred CeEEEEECCCCcEEEEEccc----------------CCceeEEEEcCC-CCEEEEEcCCCeEEEEECCCcceeEEEcC--
Confidence 899999954 43 333221 123468999998 66666666678899999876544322111
Q ss_pred cCCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCc
Q 024317 202 ALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRL 238 (269)
Q Consensus 202 ~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~ 238 (269)
.-.....+++.++|...++- .++.+
T Consensus 247 ------------h~~~v~~~~~sp~~~~l~s~s~D~~v 272 (321)
T 3ow8_A 247 ------------HASWVLNVAFCPDDTHFVSSSSDKSV 272 (321)
T ss_dssp ------------CSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ------------CCCceEEEEECCCCCEEEEEeCCCcE
Confidence 11234567777777544433 44433
No 134
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.67 E-value=0.0014 Score=60.00 Aligned_cols=129 Identities=9% Similarity=-0.040 Sum_probs=75.5
Q ss_pred CCcceEEE--ecCCCeEEEEeC-----CCCEEEEEecCCCCCccEEEEE--cCCcccCCCCCcc------cccCCCCceE
Q 024317 45 INPHSVID--RPGSSDLIVLDS-----SRSAFYTLSFPLSEESVVKRLA--GDGVQGYSDGEPG------SARFDKPKSF 109 (269)
Q Consensus 45 ~~P~giav--~~~~g~lyV~D~-----~~~~I~~~dl~~~~~g~~~~~~--g~g~~g~~dg~~~------~~~~~~P~gi 109 (269)
..|..|.+ +|++..+||+.. .++.|..+..+ +|+..... ........ +... .+.-..|.+|
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d---~g~~~~~~vIdi~~~~v~-~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE---DGKWNAEKVIEIPAEPLE-GNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE---TTEEEEEEEEEECCEECC-SSCCGGGGGGTEECCCCCCE
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec---CCceeEEEEEeCCCcccc-ccccccccccccCCCceeEE
Confidence 35888866 887789999998 88888877642 25432211 01100000 0000 0012579999
Q ss_pred EEcCCCC-EEEEeCCCCEEEEEeCC--cc-eEEecCCCCC-CCCCCCccccccccCceEEEEeCCCCEEEEEE
Q 024317 110 AVDMKGN-IYVADKSNHVIRKITNL--GV-TTIAGGGSKK-EGRADGPAQNASFSNDFELTFVPHICALLISD 177 (269)
Q Consensus 110 avd~~G~-lyVaD~~n~~I~~~~~~--g~-~~~~g~~~~~-~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD 177 (269)
.++++|. |||++.+.+.|.+|+-. +. +.+.-....+ +...+.......-..|.++++++++..|||+.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999998 99999999999999842 22 2221111110 00000000000123699999999988999999
No 135
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.66 E-value=0.00048 Score=59.97 Aligned_cols=108 Identities=10% Similarity=0.113 Sum_probs=70.9
Q ss_pred EEecCCCeEEEEe---CCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCC-CCEEEEeCCCCE
Q 024317 51 IDRPGSSDLIVLD---SSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK-GNIYVADKSNHV 126 (269)
Q Consensus 51 av~~~~g~lyV~D---~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~-G~lyVaD~~n~~ 126 (269)
++++.++.||++| .++..|++++++ .. ....+.... . ++++.. +.||++|.+..+
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d--Gs-~~~~lt~~~-------------~-----~~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRID--GE-EKKKIKNHY-------------L-----FTCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETT--SC-CCEEEESSC-------------C-----CCSEEETTEEEEECTTTCC
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECC--CC-CeEEEeCCC-------------c-----eEeeEECCEEEEEeCCCce
Confidence 4445689999999 678899999763 11 122232110 0 223444 459999998899
Q ss_pred EEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC-CeEEEEECCCCeEEEec
Q 024317 127 IRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN-QLIRQINLKPEDCSKSS 197 (269)
Q Consensus 127 I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n-~~I~~~~~~~~~~~~~~ 197 (269)
|.+.+.+|. ......+ +..++++|+++.||.+|..+ .+|.+.+++|.......
T Consensus 169 Iy~~~l~g~~~~~l~~~------------------~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt 223 (302)
T 3s25_A 169 LYRYDTASQSEALFYDC------------------NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLT 223 (302)
T ss_dssp EEEEETTTTEEEEEECS------------------CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECS
T ss_pred EEEEECCCCCEEEEeCC------------------CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEe
Confidence 999998887 3332211 11234567778999999754 58999999987665543
No 136
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.65 E-value=0.0069 Score=55.89 Aligned_cols=141 Identities=12% Similarity=0.117 Sum_probs=90.3
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
..+++++| ++..+++-...+.|..+|. +++ +..+.+. -.....++++++|.+.++=...+
T Consensus 429 v~~~~~s~-d~~~l~~~~~d~~v~~w~~----~~~~~~~~~~~--------------~~~v~~~~~spd~~~las~~~d~ 489 (577)
T 2ymu_A 429 VWGVAFSP-DDQTIASASDDKTVKLWNR----NGQLLQTLTGH--------------SSSVRGVAFSPDGQTIASASDDK 489 (577)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEET----TSCEEEEEECC--------------SSCEEEEEECTTSCEEEEEETTS
T ss_pred eEEEEECC-CCCEEEEEcCCCEEEEEEC----CCCEEEEEcCC--------------CCCEEEEEEcCCCCEEEEEeCCC
Confidence 46678865 5555555556677888763 333 3333221 12457899999999877766788
Q ss_pred EEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccC
Q 024317 126 VIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSAL 203 (269)
Q Consensus 126 ~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~ 203 (269)
.|+.++.+|. ..+.+. -...+.|+++|+ +.++++-...+.|+.++..+..+......
T Consensus 490 ~i~iw~~~~~~~~~~~~h----------------~~~v~~l~~s~d-g~~l~s~~~dg~v~lwd~~~~~~~~~~~h---- 548 (577)
T 2ymu_A 490 TVKLWNRNGQLLQTLTGH----------------SSSVRGVAFSPD-GQTIASASDDKTVKLWNRNGQLLQTLTGH---- 548 (577)
T ss_dssp EEEEEETTSCEEEEEECC----------------SSCEEEEEECTT-SSCEEEEETTSEEEEECTTSCEEEEEECC----
T ss_pred EEEEEcCCCCEEEEEeCC----------------CCCEEEEEEcCC-CCEEEEEECcCEEEEEeCCCCEEEEEcCC----
Confidence 9999998887 444442 134578999998 54444444567899999877655433211
Q ss_pred CCcccceeeeeccceeeEEEecCCcEEEEc-CCCCc
Q 024317 204 GAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRL 238 (269)
Q Consensus 204 g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~ 238 (269)
-....++++.++|+..++- .++.+
T Consensus 549 -----------~~~v~~~~fs~dg~~l~s~~~D~~i 573 (577)
T 2ymu_A 549 -----------SSSVWGVAFSPDGQTIASASSDKTV 573 (577)
T ss_dssp -----------SSCEEEEEECTTSSCEEEEETTSCE
T ss_pred -----------CCCEEEEEEcCCCCEEEEEeCCCEE
Confidence 1345678999999665543 44443
No 137
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.62 E-value=0.013 Score=49.59 Aligned_cols=143 Identities=8% Similarity=-0.049 Sum_probs=88.4
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
....+++++ ++..+++-...+.|+.+|+ .+++....... -.....++++++|.++++-..++
T Consensus 185 ~i~~~~~~~-~~~~l~~~~~dg~i~~~d~---~~~~~~~~~~~--------------~~~v~~~~~s~~~~~l~~~~~~~ 246 (337)
T 1gxr_A 185 GASCIDISN-DGTKLWTGGLDNTVRSWDL---REGRQLQQHDF--------------TSQIFSLGYCPTGEWLAVGMESS 246 (337)
T ss_dssp CEEEEEECT-TSSEEEEEETTSEEEEEET---TTTEEEEEEEC--------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred ceEEEEECC-CCCEEEEEecCCcEEEEEC---CCCceEeeecC--------------CCceEEEEECCCCCEEEEEcCCC
Confidence 457788865 4555555556778888875 34443332211 12457799999999766666678
Q ss_pred EEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccC
Q 024317 126 VIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSAL 203 (269)
Q Consensus 126 ~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~ 203 (269)
.|+.++.... ..+.+. -..+..++++++ +.++++-..++.|+.++............
T Consensus 247 ~i~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~---- 305 (337)
T 1gxr_A 247 NVEVLHVNKPDKYQLHLH----------------ESCVLSLKFAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSKE---- 305 (337)
T ss_dssp CEEEEETTSSCEEEECCC----------------SSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEEC----
T ss_pred cEEEEECCCCCeEEEcCC----------------ccceeEEEECCC-CCEEEEecCCCcEEEEECCCCeEEEEecC----
Confidence 8999986654 332221 234678999998 55555555578999999876654422111
Q ss_pred CCcccceeeeeccceeeEEEecCCcEEE-EcCCCCc
Q 024317 204 GAVSVWVLVSVLSCLVSLVIGFVARPYI-IRHTGRL 238 (269)
Q Consensus 204 g~~~~~~~~~~l~~p~gia~d~~g~lyV-ad~~g~~ 238 (269)
-..+..+++.++++..+ +..+|.+
T Consensus 306 -----------~~~v~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 306 -----------SSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp -----------SSCEEEEEECTTSCEEEEEETTSCE
T ss_pred -----------CCcEEEEEECCCCCEEEEecCCCeE
Confidence 13466788888885444 4455544
No 138
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.59 E-value=0.0035 Score=61.06 Aligned_cols=150 Identities=7% Similarity=-0.007 Sum_probs=93.5
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
...|+.+ .+++|||+.. +.|++++. .++++..+..... . ....+...+|+.|++|+|||+-.++ -
T Consensus 452 v~~i~~d-~~g~lwigt~--~Gl~~~~~---~~~~~~~~~~~~~-----~---~~~~~~i~~i~~d~~g~lWigt~~~-G 516 (781)
T 3v9f_A 452 VRVFYED-KNKKIWIGTH--AGVFVIDL---ASKKVIHHYDTSN-----S---QLLENFVRSIAQDSEGRFWIGTFGG-G 516 (781)
T ss_dssp EEEEEEC-TTSEEEEEET--TEEEEEES---SSSSCCEEECTTT-----S---SCSCSCEEEEEECTTCCEEEEESSS-C
T ss_pred EEEEEEC-CCCCEEEEEC--CceEEEeC---CCCeEEecccCcc-----c---ccccceeEEEEEcCCCCEEEEEcCC-C
Confidence 4567764 6889999875 57888874 3444444431110 0 0112466889999999999998644 4
Q ss_pred EEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccCC
Q 024317 127 IRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSALG 204 (269)
Q Consensus 127 I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g 204 (269)
+.++++++. ..+.... + . .-+...+|+.+++ |+||++-. ++.|.++++.......+... .|
T Consensus 517 l~~~~~~~~~~~~~~~~~--~------l----~~~~i~~i~~d~~-g~lWi~T~-~Glv~~~d~~~~~~~~~~~~---~g 579 (781)
T 3v9f_A 517 VGIYTPDMQLVRKFNQYE--G------F----CSNTINQIYRSSK-GQMWLATG-EGLVCFPSARNFDYQVFQRK---EG 579 (781)
T ss_dssp EEEECTTCCEEEEECTTT--T------C----SCSCEEEEEECTT-SCEEEEET-TEEEEESCTTTCCCEEECGG---GT
T ss_pred EEEEeCCCCeEEEccCCC--C------C----CCCeeEEEEECCC-CCEEEEEC-CCceEEECCCCCcEEEcccc---CC
Confidence 788998764 3332210 0 0 0234578888876 89999987 45448998876544433221 11
Q ss_pred CcccceeeeeccceeeEEEecCCcEEEEcCCC
Q 024317 205 AVSVWVLVSVLSCLVSLVIGFVARPYIIRHTG 236 (269)
Q Consensus 205 ~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g 236 (269)
- .-....+|+.|++|+||++...|
T Consensus 580 l--------~~~~i~~i~~d~~g~lW~~t~~G 603 (781)
T 3v9f_A 580 L--------PNTHIRAISEDKNGNIWASTNTG 603 (781)
T ss_dssp C--------SCCCCCEEEECSSSCEEEECSSC
T ss_pred C--------CCceEEEEEECCCCCEEEEcCCc
Confidence 0 01224689999999999998655
No 139
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.59 E-value=0.0016 Score=56.61 Aligned_cols=107 Identities=9% Similarity=0.061 Sum_probs=69.2
Q ss_pred cceEEEecCCCeEEEEeCC-------------CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC
Q 024317 47 PHSVIDRPGSSDLIVLDSS-------------RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM 113 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~-------------~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~ 113 (269)
+..|.+ .++.||.++.. .+.|++++++ .++...+. +. .+.++..
T Consensus 57 ~~~i~~--~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d---g~~~~~l~-----------------~~-~~~~~s~ 113 (302)
T 3s25_A 57 AMYINA--DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN---GHGSTVLD-----------------PD-PCIYASL 113 (302)
T ss_dssp EEEEEE--CSSEEEEEEECC------CCSSCCSEEEEEEETT---SCCCEEEE-----------------CS-CEEEEEE
T ss_pred eeeEEE--cCCEEEEEECCCCcccccceeccCCCeEEEEeCC---CCcceEee-----------------cC-CccEEEE
Confidence 455655 57889888654 3678888652 11122221 11 1234444
Q ss_pred CC-CEEEEe---CCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEE
Q 024317 114 KG-NIYVAD---KSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQIN 187 (269)
Q Consensus 114 ~G-~lyVaD---~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~ 187 (269)
+| .||++| ..+..|.+++.+|. ..+.... . ++++++++.||.+|.+..+|.+.+
T Consensus 114 ~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~---------------~-----~~~~~~g~~iy~t~~g~~~Iy~~~ 173 (302)
T 3s25_A 114 IGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY---------------L-----FTCNTSDRYFYYNNPKNGQLYRYD 173 (302)
T ss_dssp ETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC---------------C-----CCSEEETTEEEEECTTTCCEEEEE
T ss_pred eCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC---------------c-----eEeeEECCEEEEEeCCCceEEEEE
Confidence 44 499999 67889999999987 4444321 1 223555679999999888999999
Q ss_pred CCCCeEEEe
Q 024317 188 LKPEDCSKS 196 (269)
Q Consensus 188 ~~~~~~~~~ 196 (269)
.++......
T Consensus 174 l~g~~~~~l 182 (302)
T 3s25_A 174 TASQSEALF 182 (302)
T ss_dssp TTTTEEEEE
T ss_pred CCCCCEEEE
Confidence 998765544
No 140
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.57 E-value=0.018 Score=49.51 Aligned_cols=145 Identities=8% Similarity=0.080 Sum_probs=90.6
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
....++++| ++.++++-...+.|..+|+ .+++....... .-.....++++++|.++++=...+
T Consensus 166 ~v~~~~~sp-dg~~lasg~~dg~i~iwd~---~~~~~~~~~~~-------------h~~~v~~l~~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 166 FILSIAYSP-DGKYLASGAIDGIINIFDI---ATGKLLHTLEG-------------HAMPIRSLTFSPDSQLLVTASDDG 228 (321)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEET---TTTEEEEEECC-------------CSSCCCEEEECTTSCEEEEECTTS
T ss_pred eEEEEEECC-CCCEEEEEcCCCeEEEEEC---CCCcEEEEEcc-------------cCCceeEEEEcCCCCEEEEEcCCC
Confidence 356788875 5666666566778888885 34544332211 112346899999999888777788
Q ss_pred EEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 126 VIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 126 ~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
.|+.++... . .++.+. -.....++++|+ +..+++-...+.|+.++............
T Consensus 229 ~i~iwd~~~~~~~~~~~~h----------------~~~v~~~~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--- 288 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTLSGH----------------ASWVLNVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFD--- 288 (321)
T ss_dssp CEEEEETTTCCEEEEECCC----------------SSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECC---
T ss_pred eEEEEECCCcceeEEEcCC----------------CCceEEEEECCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEcC---
Confidence 899998643 3 333322 134578999998 55555555578899999877654432211
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRL 238 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~ 238 (269)
.-....++++.++|...++- .++.+
T Consensus 289 -----------h~~~v~~v~~s~~g~~l~s~~~d~~i 314 (321)
T 3ow8_A 289 -----------HQDQVWGVKYNGNGSKIVSVGDDQEI 314 (321)
T ss_dssp -----------CSSCEEEEEECTTSSEEEEEETTCCE
T ss_pred -----------CCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 11335678888888554443 44444
No 141
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.55 E-value=0.014 Score=53.82 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=75.3
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccE-EEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~-~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
...++++++ ++..+++-...+.|+.+| .+++. ..+.+. -....++++.+++.++++-..+
T Consensus 387 ~v~~~~~s~-dg~~l~~~~~d~~v~~~~----~~~~~~~~~~~~--------------~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 387 SVRGVAFSP-DGQTIASASDDKTVKLWN----RNGQLLQTLTGH--------------SSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp CEEEEEECT-TSSCEEEEETTSEEEEEC----TTCCEEEEEECC--------------SSCEEEEEECTTSSEEEEEETT
T ss_pred CeEEEEECC-CCCEEEEEeCCCEEEEEe----CCCCEEEEecCC--------------CCCeEEEEECCCCCEEEEEcCC
Confidence 456788865 555555555567788874 34443 333221 1234679999999977776678
Q ss_pred CEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEe
Q 024317 125 HVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKS 196 (269)
Q Consensus 125 ~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~ 196 (269)
+.|+.++.++. ..+.+. -.....++++|+ +.++++-..++.|+.++..+..+..+
T Consensus 448 ~~v~~w~~~~~~~~~~~~~----------------~~~v~~~~~spd-~~~las~~~d~~i~iw~~~~~~~~~~ 504 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTLTGH----------------SSSVRGVAFSPD-GQTIASASDDKTVKLWNRNGQLLQTL 504 (577)
T ss_dssp SEEEEEETTSCEEEEEECC----------------SSCEEEEEECTT-SCEEEEEETTSEEEEEETTSCEEEEE
T ss_pred CEEEEEECCCCEEEEEcCC----------------CCCEEEEEEcCC-CCEEEEEeCCCEEEEEcCCCCEEEEE
Confidence 89999998876 444432 124578999998 55555555578899999877655443
No 142
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.49 E-value=0.023 Score=49.14 Aligned_cols=147 Identities=10% Similarity=0.030 Sum_probs=90.1
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEE-EEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVK-RLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~-~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
....++++| ++.++++-...+.|..+|+ .++... .+.+. -.....++++++|+++++-...
T Consensus 186 ~v~~~~~~~-~~~~l~sg~~d~~v~~wd~---~~~~~~~~~~~h--------------~~~v~~v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 186 DVMSLSLAP-DTRLFVSGACDASAKLWDV---REGMCRQTFTGH--------------ESDINAICFFPNGNAFATGSDD 247 (340)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEET---TTCSEEEEECCC--------------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEECC-CCCEEEEEeCCCcEEEEEC---CCCeeEEEEcCC--------------cCCEEEEEEcCCCCEEEEEcCC
Confidence 346788865 6777777777788888875 344433 33211 1245789999999988887778
Q ss_pred CEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 125 HVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 125 ~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
+.|+.+|.... ....... ........++++|+ +.++++-..++.|+.++............
T Consensus 248 ~~v~iwd~~~~~~~~~~~~~-------------~~~~~v~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~~~~--- 310 (340)
T 1got_B 248 ATCRLFDLRADQELMTYSHD-------------NIICGITSVSFSKS-GRLLLAGYDDFNCNVWDALKADRAGVLAG--- 310 (340)
T ss_dssp SCEEEEETTTTEEEEEECCT-------------TCCSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEEC---
T ss_pred CcEEEEECCCCcEEEEEccC-------------CcccceEEEEECCC-CCEEEEECCCCeEEEEEcccCcEeeEeec---
Confidence 89999996443 2111110 01223578999998 66666666678999999765443221111
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEE-cCCCCc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYII-RHTGRL 238 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVa-d~~g~~ 238 (269)
.-.....+++.++|...++ ..++.+
T Consensus 311 -----------h~~~v~~~~~s~dg~~l~s~s~D~~i 336 (340)
T 1got_B 311 -----------HDNRVSCLGVTDDGMAVATGSWDSFL 336 (340)
T ss_dssp -----------CSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred -----------CCCcEEEEEEcCCCCEEEEEcCCccE
Confidence 1123556888888854444 344443
No 143
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.45 E-value=0.00075 Score=62.28 Aligned_cols=118 Identities=15% Similarity=0.113 Sum_probs=72.1
Q ss_pred cCCCCceEEEcCCCC--EEEEeCCCCEEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCC---CCEE
Q 024317 102 RFDKPKSFAVDMKGN--IYVADKSNHVIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPH---ICAL 173 (269)
Q Consensus 102 ~~~~P~giavd~~G~--lyVaD~~n~~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~---~g~L 173 (269)
.|..|.+|++.++|. |||++. .++|++++++|. ..+.+.... ...+. .......+.|||++|+ ++.|
T Consensus 12 gL~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~~~~~~~~~~~---~~~g~-~~~~e~Gllgia~~P~f~~n~~l 86 (463)
T 2wg3_C 12 GLRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIFKEPYLDIHKL---VQSGI-KGGDERGLLSLAFHPNYKKNGKL 86 (463)
T ss_dssp EESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBCSSCSEECTTT---BCCCC-SSSCCCSEEEEEECTTHHHHCEE
T ss_pred CCCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCeeeeeecCCcce---eccCc-cccCCCcceeeEeCCCCcCCCEE
Confidence 488999999999985 999997 579999987764 223322110 00000 0001245679999985 5799
Q ss_pred EEEECCC------------CeEEEEECCCC---------eEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEE
Q 024317 174 LISDHGN------------QLIRQINLKPE---------DCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYII 232 (269)
Q Consensus 174 yVaD~~n------------~~I~~~~~~~~---------~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVa 232 (269)
||+-+.. .+|.++..... ..+.+... ... .--.-..|++++||.|||+
T Consensus 87 Yv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~--~~~---------~~H~g~~l~fgpDG~LYv~ 155 (463)
T 2wg3_C 87 YVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVA--ELH---------RKHLGGQLLFGPDGFLYII 155 (463)
T ss_dssp EEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEE--ESS---------SSSCEEEEEECTTSCEEEE
T ss_pred EEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcC--CCC---------CcccCCcEeECCCCcEEEE
Confidence 9986421 48888886531 11111111 000 0122457999999999999
Q ss_pred cCC
Q 024317 233 RHT 235 (269)
Q Consensus 233 d~~ 235 (269)
--+
T Consensus 156 ~Gd 158 (463)
T 2wg3_C 156 LGD 158 (463)
T ss_dssp ECC
T ss_pred eCC
Confidence 743
No 144
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.44 E-value=0.0019 Score=61.32 Aligned_cols=118 Identities=17% Similarity=0.205 Sum_probs=76.8
Q ss_pred ccCCCCceEEEcC-CCCEEEEeCCC---------------------CEEEEEeCCcc---------eE--EecCCCCCCC
Q 024317 101 ARFDKPKSFAVDM-KGNIYVADKSN---------------------HVIRKITNLGV---------TT--IAGGGSKKEG 147 (269)
Q Consensus 101 ~~~~~P~giavd~-~G~lyVaD~~n---------------------~~I~~~~~~g~---------~~--~~g~~~~~~~ 147 (269)
..|.+|++|++++ +|.+||+-+.+ ++|+++++++. .. +++.......
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 4699999999996 88999997742 57888875431 11 1221111000
Q ss_pred ----CCCCccccccccCceEEEEeCCCCEEEEEEC------------CCCeEEEEECCCCeEEEecccCccCCCccccee
Q 024317 148 ----RADGPAQNASFSNDFELTFVPHICALLISDH------------GNQLIRQINLKPEDCSKSSQSGSALGAVSVWVL 211 (269)
Q Consensus 148 ----~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~------------~n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 211 (269)
..........|..|..|++++. |+|||+.= +|+.++...+..+.+..+... +.+
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~-G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~--P~g------- 530 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG--PIG------- 530 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC--CTT-------
T ss_pred cccccccccCCCCCccCCcceEECCC-CCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC--CCC-------
Confidence 0001112335899999999997 88988754 356788888776666665543 222
Q ss_pred eeeccceeeEEEecCC-cEEEE
Q 024317 212 VSVLSCLVSLVIGFVA-RPYII 232 (269)
Q Consensus 212 ~~~l~~p~gia~d~~g-~lyVa 232 (269)
+...|+++.+|+ .|||.
T Consensus 531 ----aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 531 ----CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp ----CEEEEEEECTTSSEEEEE
T ss_pred ----ccCcCeeECCCCCEEEEE
Confidence 568899999999 67776
No 145
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.43 E-value=0.01 Score=57.73 Aligned_cols=150 Identities=9% Similarity=-0.008 Sum_probs=94.2
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
...+|+.+ .+|+|||+-.++ -+++++. ..+++..+... .+ ..-+...+|+.|++|+||++.. ++
T Consensus 496 ~i~~i~~d-~~g~lWigt~~~-Gl~~~~~---~~~~~~~~~~~------~~----l~~~~i~~i~~d~~g~lWi~T~-~G 559 (781)
T 3v9f_A 496 FVRSIAQD-SEGRFWIGTFGG-GVGIYTP---DMQLVRKFNQY------EG----FCSNTINQIYRSSKGQMWLATG-EG 559 (781)
T ss_dssp CEEEEEEC-TTCCEEEEESSS-CEEEECT---TCCEEEEECTT------TT----CSCSCEEEEEECTTSCEEEEET-TE
T ss_pred eeEEEEEc-CCCCEEEEEcCC-CEEEEeC---CCCeEEEccCC------CC----CCCCeeEEEEECCCCCEEEEEC-CC
Confidence 45678884 689999997644 3778853 34455554311 00 0123457899999999999986 44
Q ss_pred EEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEeccc-Ccc
Q 024317 126 VIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQS-GSA 202 (269)
Q Consensus 126 ~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~-g~~ 202 (269)
-|.++++... ..+.... +.. -+...+|+.+++ |+||++-. +-|.+|++.......+... |..
T Consensus 560 lv~~~d~~~~~~~~~~~~~--------gl~----~~~i~~i~~d~~-g~lW~~t~--~Gl~~~~~~~~~~~~~~~~dGl~ 624 (781)
T 3v9f_A 560 LVCFPSARNFDYQVFQRKE--------GLP----NTHIRAISEDKN-GNIWASTN--TGISCYITSKKCFYTYDHSNNIP 624 (781)
T ss_dssp EEEESCTTTCCCEEECGGG--------TCS----CCCCCEEEECSS-SCEEEECS--SCEEEEETTTTEEEEECGGGTCC
T ss_pred ceEEECCCCCcEEEccccC--------CCC----CceEEEEEECCC-CCEEEEcC--CceEEEECCCCceEEecccCCcc
Confidence 4488987654 3332110 000 123468988876 89999863 4499999988766655432 111
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEEcCCC
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTG 236 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g 236 (269)
.. . -.+..++.+++|+||+.-.+|
T Consensus 625 ~~---------~-f~~~~~~~~~~G~l~~g~~~G 648 (781)
T 3v9f_A 625 QG---------S-FISGCVTKDHNGLIYFGSING 648 (781)
T ss_dssp SS---------C-EEEEEEEECTTSCEEEEETTE
T ss_pred cc---------c-cccCceEECCCCEEEEECCCc
Confidence 11 0 124578889999999998665
No 146
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.33 E-value=0.071 Score=46.77 Aligned_cols=157 Identities=9% Similarity=0.004 Sum_probs=94.9
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
...+++.+.+++++++-...+.|..+|+.. ....+..+.+. -.....+++.++|..+++=...+.
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~-~~~~~~~~~~h--------------~~~v~~v~~~p~~~~l~s~s~D~~ 272 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRI-TSRAVRTYHGH--------------EGDINSVKFFPDGQRFGTGSDDGT 272 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTT-TCCCCEEECCC--------------SSCCCEEEECTTSSEEEEECSSSC
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCC-CCcceEEECCc--------------CCCeEEEEEecCCCeEEEEcCCCe
Confidence 456677655788888888888899998631 11223333221 124568999999998888888899
Q ss_pred EEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccC
Q 024317 127 IRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSAL 203 (269)
Q Consensus 127 I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~ 203 (269)
|+.+|.. +. ..+....... .........++++++ +.++++-..++.|+.++............- ..
T Consensus 273 i~lwd~~~~~~~~~~~~~~~~~---------~~~~~~v~~~~~s~~-g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-~~ 341 (380)
T 3iz6_a 273 CRLFDMRTGHQLQVYNREPDRN---------DNELPIVTSVAFSIS-GRLLFAGYSNGDCYVWDTLLAEMVLNLGTL-QN 341 (380)
T ss_dssp EEEEETTTTEEEEEECCCCSSS---------CCSSCSCSEEEECSS-SSEEEEECTTSCEEEEETTTCCEEEEECCS-CS
T ss_pred EEEEECCCCcEEEEeccccccc---------ccccCceEEEEECCC-CCEEEEEECCCCEEEEECCCCceEEEEecc-cC
Confidence 9999954 43 2222211100 011233578999998 667777777889999997655443321110 00
Q ss_pred CCcccceeeeeccceeeEEEecCCcEEEEc-CCCCc
Q 024317 204 GAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRL 238 (269)
Q Consensus 204 g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~ 238 (269)
+ .-.....+++.++|...++- .++.+
T Consensus 342 ~---------h~~~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 342 S---------HEGRISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp S---------CCCCCCEEEECSSSSEEEEECTTSCE
T ss_pred C---------CCCceEEEEECCCCCEEEEeeCCCCE
Confidence 1 11335678888888665554 44443
No 147
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.30 E-value=0.00092 Score=55.52 Aligned_cols=107 Identities=17% Similarity=0.116 Sum_probs=68.0
Q ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEeCCc--------ceEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEE
Q 024317 103 FDKPKSFAVDMKGNIYVADKSNHVIRKITNLG--------VTTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALL 174 (269)
Q Consensus 103 ~~~P~giavd~~G~lyVaD~~n~~I~~~~~~g--------~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~Ly 174 (269)
+....+++++++|.||.. .++.++++++.. ..+.+|... .+.=..+.++++ |.||
T Consensus 40 w~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~G--------------w~~F~a~~fD~~-G~LY 102 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGG--------------WNQFQFLFFDPN-GYLY 102 (236)
T ss_dssp CTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSC--------------GGGCSEEEECTT-SCEE
T ss_pred cccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccc--------------cccceEEEECCC-CCEE
Confidence 556679999999999999 467899999732 123333211 111246888987 9999
Q ss_pred EEECCCCeEEEEECC--CCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCc
Q 024317 175 ISDHGNQLIRQINLK--PEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRL 238 (269)
Q Consensus 175 VaD~~n~~I~~~~~~--~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~ 238 (269)
++ .+++|+|+++- +...... .+...+.. .-..-.-|+++++|.||.+. ++++
T Consensus 103 av--~dG~iyr~~pP~~~~~~Wl~--~a~~vg~~-------gw~~~~~lff~p~G~Lyav~-dg~l 156 (236)
T 1tl2_A 103 AV--SKDKLYKASPPQSDTDNWIA--RATEVGSG-------GWSGFKFLFFHPNGYLYAVH-GQQF 156 (236)
T ss_dssp EE--ETTEEEEESCCCSTTCCHHH--HSEEEECS-------SGGGEEEEEECTTSCEEEEE-TTEE
T ss_pred Ee--CCCEEEEeCCCcCCCCceec--cccEeccC-------CCCceEEEEECCCceEEEEe-CCcE
Confidence 98 34899999752 2211000 00000000 11345789999999999999 8775
No 148
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.28 E-value=0.027 Score=47.48 Aligned_cols=144 Identities=13% Similarity=0.115 Sum_probs=83.7
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
...+++++ +++.+++-...+.|+.+|+ .+++...... ..-.....++++++++.+++-..++.
T Consensus 144 i~~~~~~~-~~~~l~~~~~dg~v~~~d~---~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~l~~~~~dg~ 206 (337)
T 1gxr_A 144 CYALAISP-DSKVCFSCCSDGNIAVWDL---HNQTLVRQFQ-------------GHTDGASCIDISNDGTKLWTGGLDNT 206 (337)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEET---TTTEEEEEEC-------------CCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eEEEEECC-CCCEEEEEeCCCcEEEEeC---CCCceeeeee-------------cccCceEEEEECCCCCEEEEEecCCc
Confidence 45677765 4444444444566777764 2343332221 11224578999999987666666889
Q ss_pred EEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccCC
Q 024317 127 IRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSALG 204 (269)
Q Consensus 127 I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g 204 (269)
|+.++.... ...... -..+..+++++++..|+++. .++.|+.++............
T Consensus 207 i~~~d~~~~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~~----- 264 (337)
T 1gxr_A 207 VRSWDLREGRQLQQHDF----------------TSQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKYQLHLH----- 264 (337)
T ss_dssp EEEEETTTTEEEEEEEC----------------SSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEEEECCC-----
T ss_pred EEEEECCCCceEeeecC----------------CCceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeEEEcCC-----
Confidence 999996543 222211 12357899999855555554 467899999887654332111
Q ss_pred CcccceeeeeccceeeEEEecCCcEEEEc-CCCCcc
Q 024317 205 AVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRLD 239 (269)
Q Consensus 205 ~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~~ 239 (269)
-.....+++.++|+++++- .+|.+.
T Consensus 265 ----------~~~v~~~~~~~~~~~l~~~~~dg~i~ 290 (337)
T 1gxr_A 265 ----------ESCVLSLKFAYCGKWFVSTGKDNLLN 290 (337)
T ss_dssp ----------SSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ----------ccceeEEEECCCCCEEEEecCCCcEE
Confidence 1335667777777544433 455443
No 149
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.27 E-value=0.029 Score=48.97 Aligned_cols=149 Identities=13% Similarity=0.040 Sum_probs=89.5
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD~~n~ 125 (269)
-..+++++.+..++++-...+.|+.+|+ .+++....... ...-..+..+++.+ +++++++-..++
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd~---~~~~~~~~~~~-----------~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWDT---RCPKPASQIGC-----------SAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEET---TSSSCEEECC---------------CCCEEEEEECSSCTTEEEEEETTS
T ss_pred eEEEEecCCCCCceeeeccccccccccc---cccceeeeeec-----------ceeeccceeeeecCCCCcceEEeccCC
Confidence 4567776655567777766778888875 23332222111 01112456788887 456777766688
Q ss_pred EEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 126 VIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 126 ~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
.|+.+|.. ++ .++.+. -...+.|+++|++..++++-...+.|+.++.....+.....
T Consensus 238 ~v~~wd~~~~~~~~~~~~h----------------~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~---- 297 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVH----------------SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQA---- 297 (344)
T ss_dssp EEEEEESCC--CCEEEECC----------------SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECC----
T ss_pred cEEEEECCCCcEEEEEcCC----------------CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcC----
Confidence 99999854 33 444432 12347899999855666666667889999988776543211
Q ss_pred CCCcccceeeeeccceeeEEEecCCc-EEEE-cCCCCccc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVAR-PYII-RHTGRLDP 240 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~-lyVa-d~~g~~~~ 240 (269)
+ -.....+++.++|. +.++ -.++.+..
T Consensus 298 H-----------~~~V~~v~~sp~~~~llas~s~D~~v~~ 326 (344)
T 4gqb_B 298 H-----------RDFVRDATWSPLNHSLLTTVGWDHQVVH 326 (344)
T ss_dssp C-----------SSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred C-----------CCCEEEEEEeCCCCeEEEEEcCCCeEEE
Confidence 1 13356788888884 5443 35555543
No 150
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.26 E-value=0.029 Score=48.81 Aligned_cols=114 Identities=12% Similarity=0.019 Sum_probs=75.1
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
..++++++.+++++++-...+.|..+|+. ...+..+.+.. ..-.....+++.+++.++++-...+.
T Consensus 121 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~---~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~~~d~~ 186 (383)
T 3ei3_B 121 ITGMKFNQFNTNQLFVSSIRGATTLRDFS---GSVIQVFAKTD-----------SWDYWYCCVDVSVSRQMLATGDSTGR 186 (383)
T ss_dssp EEEEEEETTEEEEEEEEETTTEEEEEETT---SCEEEEEECCC-----------CSSCCEEEEEEETTTTEEEEEETTSE
T ss_pred eeEEEeCCCCCCEEEEEeCCCEEEEEECC---CCceEEEeccC-----------CCCCCeEEEEECCCCCEEEEECCCCC
Confidence 35677765455666666667888888752 34444443221 01124578999999997777777889
Q ss_pred EEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCC
Q 024317 127 IRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKP 190 (269)
Q Consensus 127 I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~ 190 (269)
|+.++..+. ..+.+. -.....+++++++..++++-..++.|+.++...
T Consensus 187 i~i~d~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 187 LLLLGLDGHEIFKEKLH----------------KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEEETTSCEEEEEECS----------------SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEEEECCCCEEEEeccC----------------CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 999998766 343332 234578999998443666666678899999874
No 151
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.23 E-value=0.019 Score=51.52 Aligned_cols=74 Identities=9% Similarity=-0.006 Sum_probs=48.2
Q ss_pred CceEEEcCCCC-EEEEeC--CCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-
Q 024317 106 PKSFAVDMKGN-IYVADK--SNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG- 179 (269)
Q Consensus 106 P~giavd~~G~-lyVaD~--~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~- 179 (269)
...+++.++|. |+++-. +..+|++++.++. ..+... -.....++++|++..|+++...
T Consensus 269 ~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~----------------~~~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE----------------GSQNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS----------------SSEEEEEEECTTSSEEEEEEECS
T ss_pred ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC----------------CCcccCeEECCCCCEEEEEECcC
Confidence 45788989998 555543 3348888886654 332221 1234578899986678777654
Q ss_pred -CCeEEEEECCCCeEEE
Q 024317 180 -NQLIRQINLKPEDCSK 195 (269)
Q Consensus 180 -n~~I~~~~~~~~~~~~ 195 (269)
...|+.++.++.....
T Consensus 333 g~~~i~~~d~~~~~~~~ 349 (415)
T 2hqs_A 333 GQQHIAKQDLATGGVQV 349 (415)
T ss_dssp SCEEEEEEETTTCCEEE
T ss_pred CceEEEEEECCCCCEEE
Confidence 3579999988766543
No 152
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.15 E-value=0.09 Score=45.71 Aligned_cols=147 Identities=8% Similarity=-0.001 Sum_probs=86.4
Q ss_pred ceEEEecC-CCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 48 HSVIDRPG-SSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 48 ~giav~~~-~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
..+++.+. +++++++-...+.|+.+|+ .+++....... .-.....+++.++|+++++=...+.
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~---~~~~~~~~~~~-------------h~~~v~~v~~~p~~~~l~s~s~D~~ 263 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDKKAMVWDM---RSGQCVQAFET-------------HESDVNSVRYYPSGDAFASGSDDAT 263 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTSCEEEEET---TTCCEEEEECC-------------CSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEEeCCCCCEEEEEeCCCeEEEEEC---CCCcEEEEecC-------------CCCCeEEEEEeCCCCEEEEEeCCCe
Confidence 45566543 3566666666778888875 34443322210 1124467999999998877777889
Q ss_pred EEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccCC
Q 024317 127 IRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSALG 204 (269)
Q Consensus 127 I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g 204 (269)
|+.+|.... ....... ........++++++ +.++++-...+.|+.++............
T Consensus 264 v~lwd~~~~~~~~~~~~~-------------~~~~~~~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~l~~----- 324 (354)
T 2pbi_B 264 CRLYDLRADREVAIYSKE-------------SIIFGASSVDFSLS-GRLLFAGYNDYTINVWDVLKGSRVSILFG----- 324 (354)
T ss_dssp EEEEETTTTEEEEEECCT-------------TCCSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCSEEEEECC-----
T ss_pred EEEEECCCCcEEEEEcCC-------------CcccceeEEEEeCC-CCEEEEEECCCcEEEEECCCCceEEEEEC-----
Confidence 999986433 2222111 01234568999998 55555555567899999755433221111
Q ss_pred CcccceeeeeccceeeEEEecCCcEEEE-cCCCCc
Q 024317 205 AVSVWVLVSVLSCLVSLVIGFVARPYII-RHTGRL 238 (269)
Q Consensus 205 ~~~~~~~~~~l~~p~gia~d~~g~lyVa-d~~g~~ 238 (269)
.-.....+++.++|...++ ..++.+
T Consensus 325 ---------h~~~v~~l~~spdg~~l~sgs~D~~v 350 (354)
T 2pbi_B 325 ---------HENRVSTLRVSPDGTAFCSGSWDHTL 350 (354)
T ss_dssp ---------CSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred ---------CCCcEEEEEECCCCCEEEEEcCCCCE
Confidence 1134567889999965544 355443
No 153
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.11 E-value=0.0075 Score=54.16 Aligned_cols=114 Identities=11% Similarity=0.030 Sum_probs=75.1
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
-.+|+++|.+++++++-+..+.|..+|+ ..+.+..+.... ..-.....+++++++.++++=...+.
T Consensus 167 V~~l~f~p~~~~~l~s~s~D~~v~iwd~---~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~g~~dg~ 232 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSMEGTTRLQDF---KGNILRVFASSD-----------TINIWFCSLDVSASSRMVVTGDNVGN 232 (435)
T ss_dssp CCEEEECSSCTTEEEEECSSSCEEEEET---TSCEEEEEECCS-----------SCSCCCCCEEEETTTTEEEEECSSSB
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEeec---cCCceeEEeccC-----------CCCccEEEEEECCCCCEEEEEeCCCc
Confidence 3678887667777777777788888875 234444443221 01123356899999998887777889
Q ss_pred EEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCC
Q 024317 127 IRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKP 190 (269)
Q Consensus 127 I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~ 190 (269)
|+.++.++. ..+.+. -...++|+++|++..++++-...+.|+.++...
T Consensus 233 i~~wd~~~~~~~~~~~h----------------~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 233 VILLNMDGKELWNLRMH----------------KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp EEEEESSSCBCCCSBCC----------------SSCEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred EeeeccCcceeEEEecc----------------cceEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 999997665 222111 123478999988566777666677888888754
No 154
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.08 E-value=0.029 Score=54.61 Aligned_cols=153 Identities=10% Similarity=0.102 Sum_probs=92.5
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
....|+.+ .+|+|||+-. +.+++++. .++++..+.... +. ....-+....|+.|++|+|||+.. +
T Consensus 453 ~v~~i~~d-~~g~lwigt~--~Gl~~~~~---~~~~~~~~~~~~-----~~--~~~~~~~i~~i~~d~~g~lWigt~--~ 517 (795)
T 4a2l_A 453 NVYAILPD-GEGNLWLGTL--SALVRFNP---EQRSFTTIEKEK-----DG--TPVVSKQITTLFRDSHKRLWIGGE--E 517 (795)
T ss_dssp CEEEEEEC-SSSCEEEEES--SCEEEEET---TTTEEEECCBCT-----TC--CBCCCCCEEEEEECTTCCEEEEES--S
T ss_pred eeEEEEEC-CCCCEEEEec--CceeEEeC---CCCeEEEccccc-----cc--cccCCceEEEEEECCCCCEEEEeC--C
Confidence 34567764 5789999875 45888863 345555442110 00 000113457899999999999986 4
Q ss_pred EEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccCC
Q 024317 126 VIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSALG 204 (269)
Q Consensus 126 ~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g 204 (269)
-+.+++++.. ..+..... .++ ..-....+|+.+++ |.|||+-.. -|.++++.......+... .|
T Consensus 518 Gl~~~~~~~~~~~~~~~~~-----~~~----l~~~~i~~i~~d~~-g~lWigT~~--Gl~~~d~~~~~~~~~~~~---~g 582 (795)
T 4a2l_A 518 GLSVFKQEGLDIQKASILP-----VSN----VTKLFTNCIYEASN-GIIWVGTRE--GFYCFNEKDKQIKRYNTT---NG 582 (795)
T ss_dssp CEEEEEEETTEEEECCCSC-----SCG----GGGSCEEEEEECTT-SCEEEEESS--CEEEEETTTTEEEEECGG---GT
T ss_pred ceEEEeCCCCeEEEecCCC-----CCC----CCCCeeEEEEECCC-CCEEEEeCC--CceeECCCCCcEEEeCCC---CC
Confidence 5888886544 31111000 000 01234578888876 899998864 599999887765544321 11
Q ss_pred CcccceeeeeccceeeEEEecCCcEEEEcCCC
Q 024317 205 AVSVWVLVSVLSCLVSLVIGFVARPYIIRHTG 236 (269)
Q Consensus 205 ~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g 236 (269)
- .-....+|+.|++|+||++...|
T Consensus 583 l--------~~~~i~~i~~d~~g~lWi~t~~G 606 (795)
T 4a2l_A 583 L--------PNNVVYGILEDSFGRLWLSTNRG 606 (795)
T ss_dssp C--------SCSCEEEEEECTTSCEEEEETTE
T ss_pred C--------chhheEEEEECCCCCEEEEcCCc
Confidence 0 01235689999999999998654
No 155
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.08 E-value=0.066 Score=45.16 Aligned_cols=114 Identities=16% Similarity=0.193 Sum_probs=73.6
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
.-..+++++ ++.++++-...+.|..++. .+++....... .-.....++++++++++++-...+
T Consensus 25 ~v~~~~~s~-~~~~l~s~~~dg~i~iw~~---~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~l~s~~~d~ 87 (312)
T 4ery_A 25 AVSSVKFSP-NGEWLASSSADKLIKIWGA---YDGKFEKTISG-------------HKLGISDVAWSSDSNLLVSASDDK 87 (312)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEET---TTCCEEEEECC-------------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEEEECC-CCCEEEEeeCCCeEEEEeC---CCcccchhhcc-------------CCCceEEEEEcCCCCEEEEECCCC
Confidence 457889976 5666666556677888874 34554433211 112346799999999777777788
Q ss_pred EEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 126 VIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 126 ~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
.|+.++.. +. ..+.+. -.....++++++ +.++++-..++.|+.++......
T Consensus 88 ~i~vwd~~~~~~~~~~~~~----------------~~~v~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLKGH----------------SNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVKTGKC 141 (312)
T ss_dssp EEEEEETTTCCEEEEEECC----------------SSCEEEEEECSS-SSEEEEEETTSCEEEEETTTCCE
T ss_pred EEEEEECCCCcEEEEEcCC----------------CCCEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCEE
Confidence 99999854 33 333322 123467888987 55555555567899999876543
No 156
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.05 E-value=0.037 Score=49.49 Aligned_cols=162 Identities=7% Similarity=0.007 Sum_probs=95.8
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCC-ccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-SVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~-g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~ 123 (269)
....+++++.++.++++....+.|+.+|+..... ..+..+.. .-..+..|++++++. ++++-..
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~--------------~~~~v~~i~~~p~~~~~l~tg~~ 298 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA--------------HTAEVNCLSFNPYSEFILATGSA 298 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC--------------CSSCEEEEEECSSCTTEEEEEET
T ss_pred CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec--------------CCCCeEEEEeCCCCCCEEEEEeC
Confidence 3577888776788988888899999998742110 11222211 123567899999886 7777777
Q ss_pred CCEEEEEeCCc--c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEeccc
Q 024317 124 NHVIRKITNLG--V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQS 199 (269)
Q Consensus 124 n~~I~~~~~~g--~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~ 199 (269)
.+.|+.++... . ..+.+. -.....|+++|++..++++-...++|+.++............
T Consensus 299 dg~v~vwd~~~~~~~~~~~~~h----------------~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 362 (430)
T 2xyi_A 299 DKTVALWDLRNLKLKLHSFESH----------------KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 362 (430)
T ss_dssp TSEEEEEETTCTTSCSEEEECC----------------SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHH
T ss_pred CCeEEEEeCCCCCCCeEEeecC----------------CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccc
Confidence 88999999543 2 333322 124578999998557888877788999998765210000000
Q ss_pred CccCCCcccce-eeeeccceeeEEEecCCc-EEEEc-CCCCc
Q 024317 200 GSALGAVSVWV-LVSVLSCLVSLVIGFVAR-PYIIR-HTGRL 238 (269)
Q Consensus 200 g~~~g~~~~~~-~~~~l~~p~gia~d~~g~-lyVad-~~g~~ 238 (269)
...+...... ....-..+..+++.+++. ++++- .+|.+
T Consensus 363 -~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i 403 (430)
T 2xyi_A 363 -AEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIM 403 (430)
T ss_dssp -HHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred -cccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCE
Confidence 0000000000 000124578899999987 55544 55543
No 157
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.05 E-value=0.035 Score=54.02 Aligned_cols=149 Identities=12% Similarity=0.013 Sum_probs=92.1
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
...|+.+ .+|++||+.. +.+++++. .++++ .+.... .. ....-+...+|+.|++|+|||+-.. -
T Consensus 500 i~~i~~d-~~g~lWigt~--~Gl~~~~~---~~~~~-~~~~~~----~~---~~l~~~~i~~i~~d~~g~lWigT~~--G 563 (795)
T 4a2l_A 500 ITTLFRD-SHKRLWIGGE--EGLSVFKQ---EGLDI-QKASIL----PV---SNVTKLFTNCIYEASNGIIWVGTRE--G 563 (795)
T ss_dssp EEEEEEC-TTCCEEEEES--SCEEEEEE---ETTEE-EECCCS----CS---CGGGGSCEEEEEECTTSCEEEEESS--C
T ss_pred EEEEEEC-CCCCEEEEeC--CceEEEeC---CCCeE-EEecCC----CC---CCCCCCeeEEEEECCCCCEEEEeCC--C
Confidence 4567774 6899999986 45888864 23444 332100 00 0011235578999999999999864 6
Q ss_pred EEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEeccc-CccC
Q 024317 127 IRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQS-GSAL 203 (269)
Q Consensus 127 I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~-g~~~ 203 (269)
+.++++... ..+.... +.. -+...+|+.+++ |+||++-. +-|.+|++.......+... |...
T Consensus 564 l~~~d~~~~~~~~~~~~~--------gl~----~~~i~~i~~d~~-g~lWi~t~--~Gl~~~~~~~~~~~~~~~~dGl~~ 628 (795)
T 4a2l_A 564 FYCFNEKDKQIKRYNTTN--------GLP----NNVVYGILEDSF-GRLWLSTN--RGISCFNPETEKFRNFTESDGLQS 628 (795)
T ss_dssp EEEEETTTTEEEEECGGG--------TCS----CSCEEEEEECTT-SCEEEEET--TEEEEEETTTTEEEEECGGGTCSC
T ss_pred ceeECCCCCcEEEeCCCC--------CCc----hhheEEEEECCC-CCEEEEcC--CceEEEcCCCCcEEEcCCcCCCcc
Confidence 889997654 3332110 000 123467887876 89999884 5699999988766554322 1111
Q ss_pred CCcccceeeeeccceeeEEEecCCcEEEEcCCC
Q 024317 204 GAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTG 236 (269)
Q Consensus 204 g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g 236 (269)
. . -...+++.+++|++|++..+|
T Consensus 629 ~---------~-f~~~~~~~~~~G~l~~g~~~G 651 (795)
T 4a2l_A 629 N---------Q-FNTASYCRTSVGQMYFGGING 651 (795)
T ss_dssp S---------C-EEEEEEEECTTSCEEEEETTE
T ss_pred c---------c-CccCceeECCCCeEEEecCCc
Confidence 1 0 124578889999999998665
No 158
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.03 E-value=0.066 Score=46.50 Aligned_cols=133 Identities=12% Similarity=0.042 Sum_probs=75.6
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEE-EEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVK-RLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~-~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
....+++++ ++ ++++-...+.|..+|+ .+++.. .+.+.. +.. ..-.....+++++++.++++-...
T Consensus 188 ~i~~~~~~~-~~-~l~~~~~dg~i~i~d~---~~~~~~~~~~~~~--~h~------~~~~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 188 FATSVDISE-RG-LIATGFNNGTVQISEL---STLRPLYNFESQH--SMI------NNSNSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp CCCEEEECT-TS-EEEEECTTSEEEEEET---TTTEEEEEEECCC-----------CCCCCEEEEEECSSTTEEEEEEEE
T ss_pred CceEEEECC-Cc-eEEEEeCCCcEEEEEC---CCCceeEEEeccc--ccc------ccCCccceEEECCCCCEEEEEecC
Confidence 467889975 55 7777777899999986 334433 332200 000 001245789999999977766556
Q ss_pred ---CEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEE
Q 024317 125 ---HVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSK 195 (269)
Q Consensus 125 ---~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~ 195 (269)
+.|+.++.. +. ..+.+......... ...+.-.....++++++ +.++++-..++.|+.++........
T Consensus 255 ~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 255 NSFGCITLYETEFGERIGSLSVPTHSSQASL---GEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERIT 327 (397)
T ss_dssp TTEEEEEEEETTTCCEEEEECBC-----------CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCceEEEEECCCCcccceeccCcccccccc---cccccCCcEEEEEECCC-CCEEEEEeCCCeEEEEEcCCCceeE
Confidence 789999954 43 33332100000000 00001234578999998 4455554567899999987765433
No 159
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.00 E-value=0.036 Score=47.60 Aligned_cols=104 Identities=9% Similarity=-0.049 Sum_probs=62.4
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeCC-------------------cc--eEEecCCCCCCCCCCCccccccccCceE
Q 024317 105 KPKSFAVDMKGNIYVADKSNHVIRKITNL-------------------GV--TTIAGGGSKKEGRADGPAQNASFSNDFE 163 (269)
Q Consensus 105 ~P~giavd~~G~lyVaD~~n~~I~~~~~~-------------------g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~g 163 (269)
....++++++++++++-...+.|+.++.. +. ..+.+ .-.....
T Consensus 144 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~v~~ 207 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS----------------SCGWVHG 207 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC----------------CSSCEEE
T ss_pred CeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC----------------CCCeEEE
Confidence 45789999999877776667888888842 11 11111 1234678
Q ss_pred EEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCcc
Q 024317 164 LTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRLD 239 (269)
Q Consensus 164 ia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~~ 239 (269)
+++++++..|+++. .++.|+.++............ .-.....++++++|.++++-.++.+.
T Consensus 208 ~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~d~~i~ 268 (372)
T 1k8k_C 208 VCFSANGSRVAWVS-HDSTVCLADADKKMAVATLAS--------------ETLPLLAVTFITESSLVAAGHDCFPV 268 (372)
T ss_dssp EEECSSSSEEEEEE-TTTEEEEEEGGGTTEEEEEEC--------------SSCCEEEEEEEETTEEEEEETTSSCE
T ss_pred EEECCCCCEEEEEe-CCCEEEEEECCCCceeEEEcc--------------CCCCeEEEEEecCCCEEEEEeCCeEE
Confidence 99999844555544 568899999865433222111 00234567777777665555555543
No 160
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.99 E-value=0.099 Score=46.70 Aligned_cols=116 Identities=17% Similarity=0.150 Sum_probs=72.9
Q ss_pred CcceEEEecCCCeEEEEeCC--CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC
Q 024317 46 NPHSVIDRPGSSDLIVLDSS--RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK 122 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~--~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~ 122 (269)
....++++|++..|+.+... ...|+.+|+ .+|+...+.+.. .....++++++|. |+++-.
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~---~tg~~~~l~~~~--------------~~~~~~~~spdg~~la~~~~ 242 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTL---ANGAVRQVASFP--------------RHNGAPAFSPDGSKLAFALS 242 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEET---TTCCEEEEECCS--------------SCEEEEEECTTSSEEEEEEC
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEEC---CCCcEEEeecCC--------------CcccCEEEcCCCCEEEEEEe
Confidence 45678888766666666543 368999985 356655554221 1346789999998 664543
Q ss_pred --CCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC--CCeEEEEECCCCeEE
Q 024317 123 --SNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG--NQLIRQINLKPEDCS 194 (269)
Q Consensus 123 --~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~--n~~I~~~~~~~~~~~ 194 (269)
++..|+.++..+. ..+... -.....++++|++..|+++... ..+|+.++..+....
T Consensus 243 ~~g~~~i~~~d~~~~~~~~l~~~----------------~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~ 304 (415)
T 2hqs_A 243 KTGSLNLYVMDLASGQIRQVTDG----------------RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ 304 (415)
T ss_dssp TTSSCEEEEEETTTCCEEECCCC----------------SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE
T ss_pred cCCCceEEEEECCCCCEEeCcCC----------------CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE
Confidence 3567999996543 333221 1234678899986667766542 337999998776543
No 161
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.99 E-value=0.028 Score=49.12 Aligned_cols=114 Identities=12% Similarity=0.097 Sum_probs=69.8
Q ss_pred ceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEE-EEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCCCC
Q 024317 48 HSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKR-LAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSNH 125 (269)
Q Consensus 48 ~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~-~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~n~ 125 (269)
..|++++ ++..+++-...+.|+.+|+ .+++... +.+. -..-..+++.+++. ++++-...+
T Consensus 131 ~~v~~sp-dg~~l~sgs~d~~i~iwd~---~~~~~~~~~~~h--------------~~~V~~~~~~~~~~~~l~s~s~D~ 192 (344)
T 4gqb_B 131 STVSVLS-SGTQAVSGSKDICIKVWDL---AQQVVLSSYRAH--------------AAQVTCVAASPHKDSVFLSCSEDN 192 (344)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEET---TTTEEEEEECCC--------------SSCEEEEEECSSCTTEEEEEETTS
T ss_pred EEEEECC-CCCEEEEEeCCCeEEEEEC---CCCcEEEEEcCc--------------CCceEEEEecCCCCCceeeecccc
Confidence 5677765 5666666556677888875 3444333 2211 12346788888774 777766678
Q ss_pred EEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCe
Q 024317 126 VIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPED 192 (269)
Q Consensus 126 ~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~ 192 (269)
.|+.+|.. ++ ....... ..-..+..+++++++++++++-..++.|+.++.....
T Consensus 193 ~v~iwd~~~~~~~~~~~~~-------------~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 193 RILLWDTRCPKPASQIGCS-------------APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS 248 (344)
T ss_dssp CEEEEETTSSSCEEECC-----------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--
T ss_pred ccccccccccceeeeeecc-------------eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc
Confidence 89999854 33 2221110 0113467899998767888876677899999986543
No 162
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.97 E-value=0.058 Score=48.18 Aligned_cols=123 Identities=11% Similarity=0.010 Sum_probs=78.5
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCC--------CccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSE--------ESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN 116 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~--------~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~ 116 (269)
..+..+++.+.++.++++-...+.|+.+++.... ...+..+.+ .-....++++++++.
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~--------------h~~~v~~l~~~~~~~ 194 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG--------------HQKEGYGLSWNPNLN 194 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC--------------CSSCCCCEEECTTST
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecC--------------CCCCeEEEEeCCCCC
Confidence 4678899986557788887778889999863100 011122211 122457899999887
Q ss_pred -EEEEeCCCCEEEEEeCCc--c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 117 -IYVADKSNHVIRKITNLG--V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 117 -lyVaD~~n~~I~~~~~~g--~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
++++-...+.|..++... . ..+...... ...-....+|++++.++.++++...++.|+.++.+..
T Consensus 195 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~----------~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 195 GYLLSASDDHTICLWDINATPKEHRVIDAKNIF----------TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp TEEEEECTTSCEEEEETTSCCBGGGEEECSEEE----------CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCceeccceee----------cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 777777788899888643 1 111100000 0012346789999965788888888899999998754
No 163
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.92 E-value=0.15 Score=43.20 Aligned_cols=147 Identities=6% Similarity=-0.060 Sum_probs=87.2
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEE-EEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVK-RLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~-~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
....+++++ ++..+++-...+.|..+|+. ..+... .+.+. -.....+++++++.++++-..+
T Consensus 177 ~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 177 AATVAGWST-KGKYIIAGHKDGKISKYDVS--NNYEYVDSIDLH--------------EKSISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp CEEEEEECG-GGCEEEEEETTSEEEEEETT--TTTEEEEEEECC--------------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceeEEEEcC-CCCEEEEEcCCCEEEEEECC--CCcEeEEEEecC--------------CCceeEEEECCCCCEEEEecCC
Confidence 567788876 45455554557889999862 323433 33211 1245789999999976666667
Q ss_pred CEEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC-------------eEEEEEC
Q 024317 125 HVIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ-------------LIRQINL 188 (269)
Q Consensus 125 ~~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~-------------~I~~~~~ 188 (269)
+.|+.++... . ..+.. -.....+++++++..++++...+. .|+.++.
T Consensus 240 ~~i~v~d~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 240 TNSFLVDVSTLQVLKKYET-----------------DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp SEEEEEETTTCCEEEEEEC-----------------SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred ceEEEEECCCCceeeeecC-----------------CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 8999999543 3 22221 123567888998666666665433 5666666
Q ss_pred CCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCccc
Q 024317 189 KPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRLDP 240 (269)
Q Consensus 189 ~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~~~ 240 (269)
........... .-.....+++.++|+++++- .+|.+..
T Consensus 303 ~~~~~~~~~~~--------------~~~~v~~~~~s~~~~~l~s~~~dg~v~i 341 (369)
T 3zwl_B 303 IFEEEIGRVQG--------------HFGPLNTVAISPQGTSYASGGEDGFIRL 341 (369)
T ss_dssp TTCCEEEEEEC--------------CSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CCCcchhheec--------------ccCcEEEEEECCCCCEEEEEcCCCeEEE
Confidence 55433322111 11346678888888655543 5555543
No 164
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.87 E-value=0.12 Score=42.32 Aligned_cols=115 Identities=11% Similarity=0.085 Sum_probs=68.4
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCC-ccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC-
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-SVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK- 122 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~-g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~- 122 (269)
....++++|++..++++. .+.|+.+|+ .+ ++...+... ..-..+..++++++|. |+++..
T Consensus 43 ~v~~~~~spdg~~l~~~~--~~~i~~~d~---~~~~~~~~~~~~------------~~~~~~~~~~~spdg~~l~~~~~~ 105 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS--EGLLYRLSL---AGDPSPEKVDTG------------FATICNNDHGISPDGALYAISDKV 105 (297)
T ss_dssp CCEEEEECTTSSEEEEEE--TTEEEEEES---SSCCSCEECCCT------------TCCCBCSCCEECTTSSEEEEEECT
T ss_pred ceEeeEECCCCCEEEEEc--CCeEEEEeC---CCCCCceEeccc------------cccccccceEECCCCCEEEEEEeC
Confidence 577899987555555554 568999985 23 444333211 0112456789999998 444442
Q ss_pred --CCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC--eEEEEECCCCeEE
Q 024317 123 --SNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ--LIRQINLKPEDCS 194 (269)
Q Consensus 123 --~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~--~I~~~~~~~~~~~ 194 (269)
...+|+.++.++. ..+.. ...+..++++|++..|+++...++ +|+.++..+....
T Consensus 106 ~~~~~~l~~~~~~~~~~~~~~~-----------------~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~ 166 (297)
T 2ojh_A 106 EFGKSAIYLLPSTGGTPRLMTK-----------------NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET 166 (297)
T ss_dssp TTSSCEEEEEETTCCCCEECCS-----------------SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred CCCcceEEEEECCCCceEEeec-----------------CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcce
Confidence 3578888886554 33221 112567889998666775554445 5666666655443
No 165
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.87 E-value=0.098 Score=46.07 Aligned_cols=152 Identities=10% Similarity=0.031 Sum_probs=88.9
Q ss_pred ceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCEE
Q 024317 48 HSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHVI 127 (269)
Q Consensus 48 ~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~I 127 (269)
..+++++ ++..+++-...+.|+.+|+ .+++....... .-.....+++.++|..+++-...+.|
T Consensus 127 ~~v~~s~-dg~~l~s~~~d~~i~iwd~---~~~~~~~~~~~-------------h~~~v~~~~~~p~~~~l~s~s~d~~v 189 (393)
T 1erj_A 127 RSVCFSP-DGKFLATGAEDRLIRIWDI---ENRKIVMILQG-------------HEQDIYSLDYFPSGDKLVSGSGDRTV 189 (393)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEET---TTTEEEEEECC-------------CSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEECC-CCCEEEEEcCCCeEEEEEC---CCCcEEEEEcc-------------CCCCEEEEEEcCCCCEEEEecCCCcE
Confidence 4788875 5666666666788999885 34544333211 11234679999999977777778899
Q ss_pred EEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccCCC
Q 024317 128 RKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSALGA 205 (269)
Q Consensus 128 ~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g~ 205 (269)
+.+|.. +. ...... -.....+++++.++.++++-...+.|+.++..................
T Consensus 190 ~iwd~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~ 253 (393)
T 1erj_A 190 RIWDLRTGQCSLTLSI----------------EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT 253 (393)
T ss_dssp EEEETTTTEEEEEEEC----------------SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------C
T ss_pred EEEECCCCeeEEEEEc----------------CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCC
Confidence 999854 33 221111 123567888884466766666678899999876654332211000000
Q ss_pred cccceeeeeccceeeEEEecCCcEEEEc-CCCCcc
Q 024317 206 VSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRLD 239 (269)
Q Consensus 206 ~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~~ 239 (269)
. .-.....+++.++|...++- .++.+.
T Consensus 254 ~-------h~~~v~~v~~~~~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 254 G-------HKDSVYSVVFTRDGQSVVSGSLDRSVK 281 (393)
T ss_dssp C-------CSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred C-------CCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 0 11345677888888544443 444443
No 166
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.84 E-value=0.047 Score=47.66 Aligned_cols=104 Identities=9% Similarity=0.019 Sum_probs=63.7
Q ss_pred CCceEEEcCC-CCEEEEeCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC
Q 024317 105 KPKSFAVDMK-GNIYVADKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN 180 (269)
Q Consensus 105 ~P~giavd~~-G~lyVaD~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n 180 (269)
.+..+++.++ +.++++-..++.|+.++.. +. .++.+. -...+.|+++|+++.++++-...
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~----------------~~~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH----------------SQNITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC----------------SSCEEEEEECSSSSCCEEEEETT
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecc----------------ceeEEEEEEcCCCCCEEEEEeCC
Confidence 4567888876 4566665557789988853 44 444332 12347899998855666655556
Q ss_pred CeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEec-CCcEEEEc-CCCCcc
Q 024317 181 QLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGF-VARPYIIR-HTGRLD 239 (269)
Q Consensus 181 ~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~-~g~lyVad-~~g~~~ 239 (269)
+.|+.++.+.......... . ....+|++.+ ++.++++- .+|.++
T Consensus 292 ~~i~iwd~~~~~~~~~~~H----~-----------~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 292 CTVAVLDADFSEVFRDLSH----R-----------DFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp SCEEEECTTSCEEEEECCC----S-----------SCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred CEEEEEECCCCcEeEECCC----C-----------CCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 8899999887665443211 1 2356678875 56555443 455444
No 167
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.78 E-value=0.12 Score=44.92 Aligned_cols=124 Identities=9% Similarity=-0.051 Sum_probs=75.8
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEeCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADKS 123 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD~~ 123 (269)
..-..+++++.+..++++-...+.|..+|+. +++....... ...-....++++.+ +++++++=..
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~~-----------~~h~~~v~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYD---VQNKTSFIQG-----------MGPGDAITGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETT---STTCEEEECC-----------CSTTCBEEEEEEETTEEEEEEEEET
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCC---Ccccceeeec-----------CCcCCceeEEEeCCCCCCEEEEEeC
Confidence 3467889976432677776667889999862 3333332210 00112446788888 5676666666
Q ss_pred CCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEe
Q 024317 124 NHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKS 196 (269)
Q Consensus 124 n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~ 196 (269)
.+.|+.++..+. ..+..... .-.....+++++++..|+++ ..++.|+.++.++......
T Consensus 140 d~~i~iwd~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~ 200 (383)
T 3ei3_B 140 RGATTLRDFSGSVIQVFAKTDS-------------WDYWYCCVDVSVSRQMLATG-DSTGRLLLLGLDGHEIFKE 200 (383)
T ss_dssp TTEEEEEETTSCEEEEEECCCC-------------SSCCEEEEEEETTTTEEEEE-ETTSEEEEEETTSCEEEEE
T ss_pred CCEEEEEECCCCceEEEeccCC-------------CCCCeEEEEECCCCCEEEEE-CCCCCEEEEECCCCEEEEe
Confidence 789999997765 33333211 01345789999984444444 4568999999876655443
No 168
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.77 E-value=0.071 Score=45.66 Aligned_cols=113 Identities=9% Similarity=-0.046 Sum_probs=69.2
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCc---cEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEES---VVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g---~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
.-..+++++ +++++++-...+.|+.+|+ .++ .+..+.+. -.....++++++++++++-.
T Consensus 10 ~i~~~~~s~-~~~~l~~~~~d~~v~i~~~---~~~~~~~~~~~~~h--------------~~~v~~~~~~~~~~~l~~~~ 71 (372)
T 1k8k_C 10 PISCHAWNK-DRTQIAICPNNHEVHIYEK---SGNKWVQVHELKEH--------------NGQVTGVDWAPDSNRIVTCG 71 (372)
T ss_dssp CCCEEEECT-TSSEEEEECSSSEEEEEEE---ETTEEEEEEEEECC--------------SSCEEEEEEETTTTEEEEEE
T ss_pred CeEEEEECC-CCCEEEEEeCCCEEEEEeC---CCCcEEeeeeecCC--------------CCcccEEEEeCCCCEEEEEc
Confidence 347788975 6666666666888999975 334 33333221 12457899999998666655
Q ss_pred CCCEEEEEeCC-cc-e-EEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 123 SNHVIRKITNL-GV-T-TIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 123 ~n~~I~~~~~~-g~-~-~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
..+.|+.++.. +. . ...-.. .-.....+++++++..|+++.. ++.|+.++.+..
T Consensus 72 ~dg~i~vwd~~~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~~-d~~v~i~d~~~~ 128 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWKPTLVILR--------------INRAARCVRWAPNEKKFAVGSG-SRVISICYFEQE 128 (372)
T ss_dssp TTSCEEEEEEETTEEEEEEECCC--------------CSSCEEEEEECTTSSEEEEEET-TSSEEEEEEETT
T ss_pred CCCeEEEEECCCCeeeeeEEeec--------------CCCceeEEEECCCCCEEEEEeC-CCEEEEEEecCC
Confidence 66788888743 32 1 221110 0134678999998555555554 566777765543
No 169
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.77 E-value=0.14 Score=44.91 Aligned_cols=116 Identities=11% Similarity=0.090 Sum_probs=73.4
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
....+++.+.+.+++++-...+.|..+|+ .+++....... ...-.....++++++|.++++-...+
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~---~~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~l~~~~~d~ 198 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDV---GTGAAVLTLGP-----------DVHPDTIYSVDWSRDGALICTSCRDK 198 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSCEEEEET---TTTEEEEEECT-----------TTCCSCEEEEEECTTSSCEEEEETTS
T ss_pred eEEEEEECcCCCCEEEEEcCCCEEEEEEC---CCCCccEEEec-----------CCCCCceEEEEECCCCCEEEEEecCC
Confidence 34668887644467776666788888885 34444333210 00112457899999998666666678
Q ss_pred EEEEEeCC-cc--eEE-ecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEE---CCCCeEEEEECCCC
Q 024317 126 VIRKITNL-GV--TTI-AGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISD---HGNQLIRQINLKPE 191 (269)
Q Consensus 126 ~I~~~~~~-g~--~~~-~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD---~~n~~I~~~~~~~~ 191 (269)
.|+.+|.. +. ..+ .+.. -..+..++++++ +.++++- ..++.|+.++....
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~-~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKDRPHE---------------GTRPVHAVFVSE-GKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp EEEEEETTTTEEEEEEECSSC---------------SSSCCEEEECST-TEEEEEEECTTCCEEEEEEETTBC
T ss_pred cEEEEeCCCCceeeeeccCCC---------------CCcceEEEEcCC-CcEEEEeccCCCCceEEEEcCccc
Confidence 99999964 33 222 1211 123578888987 7777665 56788999998753
No 170
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.76 E-value=0.054 Score=48.46 Aligned_cols=118 Identities=11% Similarity=0.081 Sum_probs=73.9
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD~~n~ 125 (269)
-+.|++.|.++++.++-...+.|..+|+. .......+...+ .-..-.+|++.+ +++++++=...+
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~--~~~~~~~~~~~g------------H~~~V~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFG--IKDKPTFIKGIG------------AGGSITGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSS--CCSCCEEECCCS------------SSCCCCEEEECSSCTTEEEEECSSS
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECC--CCCceeEEEccC------------CCCCEEEEEEeCCCCCEEEEEeCCC
Confidence 46788887677777776677889888763 111111111111 112346799986 678777777788
Q ss_pred EEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCe
Q 024317 126 VIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPED 192 (269)
Q Consensus 126 ~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~ 192 (269)
.|+.+|..+. ..+...... -.....++++++ +.++++-...+.|+.++.++..
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTI-------------NIWFCSLDVSAS-SRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSC-------------SCCCCCEEEETT-TTEEEEECSSSBEEEEESSSCB
T ss_pred EEEEeeccCCceeEEeccCCC-------------CccEEEEEECCC-CCEEEEEeCCCcEeeeccCcce
Confidence 9999997665 333322110 122357888998 5566655567889999987654
No 171
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.15 Score=43.21 Aligned_cols=123 Identities=8% Similarity=-0.067 Sum_probs=69.8
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC-
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN- 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n- 124 (269)
....+++++ +++.+++-...+.|..+|+ .+++....... -.....+++++++..+++-..+
T Consensus 76 ~v~~~~~~~-~~~~l~s~~~dg~i~iwd~---~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~~~~ 137 (369)
T 3zwl_B 76 TIWSIDVDC-FTKYCVTGSADYSIKLWDV---SNGQCVATWKS--------------PVPVKRVEFSPCGNYFLAILDNV 137 (369)
T ss_dssp CEEEEEECT-TSSEEEEEETTTEEEEEET---TTCCEEEEEEC--------------SSCEEEEEECTTSSEEEEEECCB
T ss_pred cEEEEEEcC-CCCEEEEEeCCCeEEEEEC---CCCcEEEEeec--------------CCCeEEEEEccCCCEEEEecCCc
Confidence 346788875 5555566556788999885 34444333211 1245789999999966666555
Q ss_pred ----CEEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCC
Q 024317 125 ----HVIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKP 190 (269)
Q Consensus 125 ----~~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~ 190 (269)
+.|..++.... ..+......... .............+++++++..|+++. .++.|+.++...
T Consensus 138 ~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 206 (369)
T 3zwl_B 138 MKNPGSINIYEIERDSATHELTKVSEEPIH---KIITHEGLDAATVAGWSTKGKYIIAGH-KDGKISKYDVSN 206 (369)
T ss_dssp TTBCCEEEEEEEEECTTTCCEEEECSSCSE---EEECCTTCCCEEEEEECGGGCEEEEEE-TTSEEEEEETTT
T ss_pred cCCCCEEEEEEecCCccceeecccccceee---eccCCcCccceeEEEEcCCCCEEEEEc-CCCEEEEEECCC
Confidence 78888874221 111111000000 000000112567899999844555554 467899999876
No 172
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.73 E-value=0.12 Score=43.95 Aligned_cols=157 Identities=13% Similarity=0.027 Sum_probs=86.3
Q ss_pred CcceEEEecC---CCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCC----CCEE
Q 024317 46 NPHSVIDRPG---SSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK----GNIY 118 (269)
Q Consensus 46 ~P~giav~~~---~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~----G~ly 118 (269)
....++++|. +...+++-...+.|..+|+. ....+..+.+.... ..-.....+++.++ |.++
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~--~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSNRVTLYECH--SQGEIRLLQSYVDA---------DADENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETTEEEEEEEC--GGGCEEEEEEEECS---------CTTCCEEEEEEEECTTTCCEEE
T ss_pred ceEEEEEecccCCCCceEEEECCCCEEEEEEcC--CCcEEEeeeecccc---------CCCCcEEEEEeccCCCCCCCEE
Confidence 4578888752 33344444445588888762 23334343321000 01123467888877 5666
Q ss_pred EEeCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEE
Q 024317 119 VADKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSK 195 (269)
Q Consensus 119 VaD~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~ 195 (269)
++=..++.|+.++.. +. ..+.+. -.....|+++|+++.++++-..++.|+.++........
T Consensus 89 ~~~~~dg~i~v~d~~~~~~~~~~~~~----------------~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 89 AVAGSRGIIRIINPITMQCIKHYVGH----------------GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVA 152 (366)
T ss_dssp EEEETTCEEEEECTTTCCEEEEEESC----------------CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEecCCCEEEEEEchhceEeeeecCC----------------CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEE
Confidence 666667899999954 33 333322 13457899998335555555557889999988665443
Q ss_pred ecccCccCCCcccceeeeeccceeeEEEecCCcEEE-EcCCCCccc
Q 024317 196 SSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYI-IRHTGRLDP 240 (269)
Q Consensus 196 ~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyV-ad~~g~~~~ 240 (269)
....-.. .-.....++++++++..+ +..+|.+..
T Consensus 153 ~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~dg~i~i 187 (366)
T 3k26_A 153 IFGGVEG-----------HRDEVLSADYDLLGEKIMSCGMDHSLKL 187 (366)
T ss_dssp EECSTTS-----------CSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred Eeccccc-----------ccCceeEEEECCCCCEEEEecCCCCEEE
Confidence 3211000 113356677777774433 334554443
No 173
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.041 Score=47.92 Aligned_cols=110 Identities=7% Similarity=-0.101 Sum_probs=65.7
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
...+++++ ++.++++-...+.|..+|+. +++ +..+.+ .-.....+++.+++ ++++-...+
T Consensus 250 i~~~~~~~-~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~--------------~~~~i~~~~~~~~~-~l~~~~~d~ 310 (425)
T 1r5m_A 250 ISVLEFND-TNKLLLSASDDGTLRIWHGG---NGNSQNCFYG--------------HSQSIVSASWVGDD-KVISCSMDG 310 (425)
T ss_dssp EEEEEEET-TTTEEEEEETTSCEEEECSS---SBSCSEEECC--------------CSSCEEEEEEETTT-EEEEEETTS
T ss_pred eEEEEECC-CCCEEEEEcCCCEEEEEECC---CCccceEecC--------------CCccEEEEEECCCC-EEEEEeCCC
Confidence 35677765 44444444456677777642 232 222211 11245778998888 666666688
Q ss_pred EEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCe
Q 024317 126 VIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPED 192 (269)
Q Consensus 126 ~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~ 192 (269)
.|+.++.. +. ..+... -..+..++++++ +.++++-..++.|+.++.....
T Consensus 311 ~i~i~d~~~~~~~~~~~~~----------------~~~i~~~~~s~~-~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 311 SVRLWSLKQNTLLALSIVD----------------GVPIFAGRISQD-GQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEEETTTTEEEEEEECT----------------TCCEEEEEECTT-SSEEEEEETTSCEEEEECHHHH
T ss_pred cEEEEECCCCcEeEecccC----------------CccEEEEEEcCC-CCEEEEEECCCeEEEEECCCCc
Confidence 99999964 33 232221 134578999998 4454444456789999876543
No 174
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.71 E-value=0.2 Score=42.65 Aligned_cols=114 Identities=15% Similarity=0.184 Sum_probs=72.6
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
-..+++++ ++...++-...+.|+.+|+ .+++ +..+.+. -.....+++++++.++++=...+
T Consensus 68 v~~~~~s~-dg~~l~s~s~D~~v~~wd~---~~~~~~~~~~~h--------------~~~v~~~~~~~~~~~l~s~s~D~ 129 (319)
T 3frx_A 68 VQDCTLTA-DGAYALSASWDKTLRLWDV---ATGETYQRFVGH--------------KSDVMSVDIDKKASMIISGSRDK 129 (319)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEET---TTTEEEEEEECC--------------SSCEEEEEECTTSCEEEEEETTS
T ss_pred EEEEEECC-CCCEEEEEeCCCEEEEEEC---CCCCeeEEEccC--------------CCcEEEEEEcCCCCEEEEEeCCC
Confidence 35678864 6666677667788999985 3454 3334322 12346789999999888877788
Q ss_pred EEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCC-----CCEEEEEECCCCeEEEEECCCCeEE
Q 024317 126 VIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPH-----ICALLISDHGNQLIRQINLKPEDCS 194 (269)
Q Consensus 126 ~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~-----~g~LyVaD~~n~~I~~~~~~~~~~~ 194 (269)
.|+.++..+. ..+.+.. .....+++.|. ++.++++-...+.|+.++.......
T Consensus 130 ~i~vwd~~~~~~~~~~~h~----------------~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~ 189 (319)
T 3frx_A 130 TIKVWTIKGQCLATLLGHN----------------DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE 189 (319)
T ss_dssp CEEEEETTSCEEEEECCCS----------------SCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEEECCCCeEEEEeccC----------------CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhh
Confidence 9999997766 4443321 12345555553 1335555556778999988765443
No 175
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.69 E-value=0.22 Score=41.78 Aligned_cols=113 Identities=17% Similarity=0.176 Sum_probs=71.9
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
....+++++ +++++++-...+.|..+|+ .+++ +..+.+. -.....+++.++++++++-...
T Consensus 67 ~v~~~~~~~-~~~~l~s~~~d~~i~vwd~---~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~s~~~d 128 (312)
T 4ery_A 67 GISDVAWSS-DSNLLVSASDDKTLKIWDV---SSGKCLKTLKGH--------------SNYVFCCNFNPQSNLIVSGSFD 128 (312)
T ss_dssp CEEEEEECT-TSSEEEEEETTSEEEEEET---TTCCEEEEEECC--------------SSCEEEEEECSSSSEEEEEETT
T ss_pred ceEEEEEcC-CCCEEEEECCCCEEEEEEC---CCCcEEEEEcCC--------------CCCEEEEEEcCCCCEEEEEeCC
Confidence 346788875 5666666666788999985 3344 3333221 1234578888899877777677
Q ss_pred CEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 125 HVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 125 ~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
+.|+.++.. +. ..+.+. -.....++++++ +.++++-...+.|+.++......
T Consensus 129 ~~i~iwd~~~~~~~~~~~~~----------------~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 129 ESVRIWDVKTGKCLKTLPAH----------------SDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQC 183 (312)
T ss_dssp SCEEEEETTTCCEEEEECCC----------------SSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCE
T ss_pred CcEEEEECCCCEEEEEecCC----------------CCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCce
Confidence 889999854 33 232221 123468899887 55555545567899999876543
No 176
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.68 E-value=0.15 Score=48.38 Aligned_cols=121 Identities=12% Similarity=0.095 Sum_probs=71.2
Q ss_pred CcceEEEecCCCeEEEEeCCC----CEEEEEecCCCCCc-cEEEEEcCCcccCCCCCcccccCCCCceEEEcC--CCC-E
Q 024317 46 NPHSVIDRPGSSDLIVLDSSR----SAFYTLSFPLSEES-VVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM--KGN-I 117 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~----~~I~~~dl~~~~~g-~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~--~G~-l 117 (269)
.+..++++|++..|+++.... ..|+.+|. .+| ....+....... .......+++.+ +|. +
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~---~~g~~~~~~~~~~~~~---------~~~~~~~~~~sp~~dg~~l 326 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDA---ETGRFVRTLFVETDKH---------YVEPLHPLTFLPGSNNQFI 326 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEET---TTCCEEEEEEEEECSS---------CCCCCSCCEECTTCSSEEE
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEEC---CCCceeeEEEEccCCC---------eECccCCceeecCCCCEEE
Confidence 356788987656677754322 47888875 455 444443211100 111235678888 888 4
Q ss_pred EEEeC-CCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceE-EEEeCCCCEEEEEECCCC----eEEEEECC
Q 024317 118 YVADK-SNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFE-LTFVPHICALLISDHGNQ----LIRQINLK 189 (269)
Q Consensus 118 yVaD~-~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~g-ia~~~~~g~LyVaD~~n~----~I~~~~~~ 189 (269)
|+++. +..+|+.++.++. ..+... . ..... +++++++..||++...++ +|++++.+
T Consensus 327 ~~~~~~g~~~l~~~~~~~~~~~~l~~~-~---------------~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 327 WQSRRDGWNHLYLYDTTGRLIRQVTKG-E---------------WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp EEECTTSSCEEEEEETTSCEEEECCCS-S---------------SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred EEEccCCccEEEEEECCCCEEEecCCC-C---------------eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 44443 3467888886665 333221 0 11223 788998778888877654 89999887
Q ss_pred CCeEE
Q 024317 190 PEDCS 194 (269)
Q Consensus 190 ~~~~~ 194 (269)
+....
T Consensus 391 ~~~~~ 395 (706)
T 2z3z_A 391 GGKTK 395 (706)
T ss_dssp CCCCE
T ss_pred CCCce
Confidence 65433
No 177
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.64 E-value=0.17 Score=42.67 Aligned_cols=111 Identities=10% Similarity=0.082 Sum_probs=73.6
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
.-.+|+++| ++.+.++-...+.|..+|+ .++. +..+.+. -..-..+++.++++++++=...
T Consensus 15 ~V~~~~fsp-~~~~l~s~~~dg~v~lWd~---~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~s~s~d 76 (304)
T 2ynn_A 15 RVKGIDFHP-TEPWVLTTLYSGRVELWNY---ETQVEVRSIQVT--------------ETPVRAGKFIARKNWIIVGSDD 76 (304)
T ss_dssp CEEEEEECS-SSSEEEEEETTSEEEEEET---TTTEEEEEEECC--------------SSCEEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEECC-CCCEEEEEcCCCcEEEEEC---CCCceeEEeecc--------------CCcEEEEEEeCCCCEEEEECCC
Confidence 468899986 5666666666789999985 3444 3333221 0123568888899977777778
Q ss_pred CEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 125 HVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 125 ~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
+.|+.++.. +. ..+.+. -.....|+++|+ +.++++-...+.|+.++.+..
T Consensus 77 ~~i~vwd~~~~~~~~~~~~h----------------~~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFEAH----------------PDYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp SEEEEEETTTCCEEEEEECC----------------SSCEEEEEECSS-SSEEEEEETTSCEEEEEGGGT
T ss_pred CEEEEEECCCCcEEEEEeCC----------------CCcEEEEEEcCC-CCEEEEECCCCeEEEEECCCC
Confidence 899999954 44 333332 123578999998 555555556788999997654
No 178
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.64 E-value=0.098 Score=45.93 Aligned_cols=120 Identities=13% Similarity=0.097 Sum_probs=73.0
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCC-----ccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCC-CEEEE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE-----SVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG-NIYVA 120 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~-----g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G-~lyVa 120 (269)
..++++++.+++++++-...+.|..+|+..... ..+..+.+ .-.....+++.+++ +++++
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~--------------h~~~v~~~~~~p~~~~~l~s 149 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG--------------HTKRVGIVAWHPTAQNVLLS 149 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC--------------CSSCEEEEEECSSBTTEEEE
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC--------------CCCeEEEEEECcCCCCEEEE
Confidence 467888764666766666678888888631100 11222221 12355789999987 57766
Q ss_pred eCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEE
Q 024317 121 DKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSK 195 (269)
Q Consensus 121 D~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~ 195 (269)
-...+.|+.++.. +. ..+.... .-.....+++++++..|+++. .++.|+.++........
T Consensus 150 ~~~dg~i~iwd~~~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~ 212 (402)
T 2aq5_A 150 AGCDNVILVWDVGTGAAVLTLGPDV--------------HPDTIYSVDWSRDGALICTSC-RDKRVRVIEPRKGTVVA 212 (402)
T ss_dssp EETTSCEEEEETTTTEEEEEECTTT--------------CCSCEEEEEECTTSSCEEEEE-TTSEEEEEETTTTEEEE
T ss_pred EcCCCEEEEEECCCCCccEEEecCC--------------CCCceEEEEECCCCCEEEEEe-cCCcEEEEeCCCCceee
Confidence 6667889999854 33 2321010 013457899999744455544 56889999988765543
No 179
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.61 E-value=0.14 Score=48.77 Aligned_cols=148 Identities=14% Similarity=0.162 Sum_probs=88.2
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
-..+++++ ++.+.++-+..+.|+.+|+ .++. +..+.+. -..-.++++++++..+++=...+
T Consensus 433 v~~v~~s~-~g~~l~sgs~Dg~v~vwd~---~~~~~~~~~~~h--------------~~~v~~~~~s~~~~~l~s~s~D~ 494 (694)
T 3dm0_A 433 VEDVVLSS-DGQFALSGSWDGELRLWDL---AAGVSTRRFVGH--------------TKDVLSVAFSLDNRQIVSASRDR 494 (694)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEET---TTTEEEEEEECC--------------SSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEEEECC-CCCEEEEEeCCCcEEEEEC---CCCcceeEEeCC--------------CCCEEEEEEeCCCCEEEEEeCCC
Confidence 35677764 6666666666788888875 3443 3333322 12346789999998777777788
Q ss_pred EEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCC-CEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 126 VIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHI-CALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 126 ~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~-g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
.|+.++..+. ..+..... ..-....+++++++. ..++++-...+.|+.++............
T Consensus 495 ~i~iwd~~~~~~~~~~~~~~------------~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~--- 559 (694)
T 3dm0_A 495 TIKLWNTLGECKYTISEGGE------------GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG--- 559 (694)
T ss_dssp CEEEECTTSCEEEEECSSTT------------SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC---
T ss_pred EEEEEECCCCcceeeccCCC------------CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC---
Confidence 9999987665 23322111 012235688888863 24556655678899999876554332211
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRL 238 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~ 238 (269)
.-.....++++++|++.++- .+|.+
T Consensus 560 -----------h~~~v~~v~~spdg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 560 -----------HTGYVSTVAVSPDGSLCASGGKDGVV 585 (694)
T ss_dssp -----------CSSCEEEEEECTTSSEEEEEETTSBC
T ss_pred -----------CCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 11235567777777655543 34433
No 180
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.57 E-value=0.069 Score=47.50 Aligned_cols=112 Identities=18% Similarity=0.284 Sum_probs=73.2
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccE-EEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~-~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
...++++| ++.++++-+..+.|..+|+ .+++. .++.+ .-....+++++++|.++++=...+
T Consensus 111 V~~~~~~p-~~~~l~s~s~Dg~i~vwd~---~~~~~~~~l~~--------------h~~~V~~v~~~~~~~~l~sgs~D~ 172 (410)
T 1vyh_C 111 VTRVIFHP-VFSVMVSASEDATIKVWDY---ETGDFERTLKG--------------HTDSVQDISFDHSGKLLASCSADM 172 (410)
T ss_dssp EEEEEECS-SSSEEEEEESSSCEEEEET---TTCCCCEEECC--------------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEcC-CCCEEEEEeCCCeEEEEEC---CCCcEEEEEec--------------cCCcEEEEEEcCCCCEEEEEeCCC
Confidence 45678865 5667777767788888885 33432 22221 122446799999999888777778
Q ss_pred EEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 126 VIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 126 ~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
.|+.++..+. .++.+. -.....++++|+ +..+++-...+.|+.++......
T Consensus 173 ~i~iwd~~~~~~~~~~~~h----------------~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~ 226 (410)
T 1vyh_C 173 TIKLWDFQGFECIRTMHGH----------------DHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYC 226 (410)
T ss_dssp CCCEEETTSSCEEECCCCC----------------SSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCE
T ss_pred eEEEEeCCCCceeEEEcCC----------------CCCEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcE
Confidence 8888886553 222111 123578999997 55555555678899999876544
No 181
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.53 E-value=0.25 Score=40.27 Aligned_cols=74 Identities=9% Similarity=0.075 Sum_probs=44.7
Q ss_pred CceEEEcCCCC-EEEEeCCCC--EEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEEC--
Q 024317 106 PKSFAVDMKGN-IYVADKSNH--VIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDH-- 178 (269)
Q Consensus 106 P~giavd~~G~-lyVaD~~n~--~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~-- 178 (269)
...+++.++|. |+++....+ +|+.++.++. ..+... -..+..++++|++..|+++..
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------------~~~~~~~~~s~dg~~l~~~~~~~ 194 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG----------------EGRNDGPDYSPDGRWIYFNSSRT 194 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS----------------SSCEEEEEECTTSSEEEEEECTT
T ss_pred ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC----------------CCccccceECCCCCEEEEEecCC
Confidence 56678988988 554544444 5556665543 222211 134578999998666776643
Q ss_pred CCCeEEEEECCCCeEEE
Q 024317 179 GNQLIRQINLKPEDCSK 195 (269)
Q Consensus 179 ~n~~I~~~~~~~~~~~~ 195 (269)
+..+|+.++..+.....
T Consensus 195 ~~~~i~~~~~~~~~~~~ 211 (297)
T 2ojh_A 195 GQMQIWRVRVDGSSVER 211 (297)
T ss_dssp SSCEEEEEETTSSCEEE
T ss_pred CCccEEEECCCCCCcEE
Confidence 45577888766655443
No 182
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.52 E-value=0.29 Score=43.30 Aligned_cols=114 Identities=15% Similarity=0.177 Sum_probs=66.5
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
-..+++.| +++.+++-+..+.|..+|+ .++. +.++.+. -..-..++++++|.++++-...+
T Consensus 195 V~~v~~~p-~~~~l~s~s~D~~i~~wd~---~~~~~~~~~~~h--------------~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 195 VSSVSIMP-NGDHIVSASRDKTIKMWEV---QTGYCVKTFTGH--------------REWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp EEEEEECS-SSSEEEEEETTSEEEEEET---TTCCEEEEEECC--------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEeC-CCCEEEEEeCCCeEEEEEC---CCCcEEEEEeCC--------------CccEEEEEECCCCCEEEEEcCCC
Confidence 45677765 5555666666778888875 2343 3333321 12345688888899887777778
Q ss_pred EEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCC-------------------CCEEEEEECCCCeE
Q 024317 126 VIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPH-------------------ICALLISDHGNQLI 183 (269)
Q Consensus 126 ~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~-------------------~g~LyVaD~~n~~I 183 (269)
.|+.++.... ..+.+.. .....++++|+ .+.++++-...+.|
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~----------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i 320 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHR----------------HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320 (410)
T ss_dssp CEEEEETTTCCEEEEECCCS----------------SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEE
T ss_pred eEEEEECCCCceeeEecCCC----------------ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeE
Confidence 8888885432 2332211 11234444442 14456666667789
Q ss_pred EEEECCCCeEE
Q 024317 184 RQINLKPEDCS 194 (269)
Q Consensus 184 ~~~~~~~~~~~ 194 (269)
+.++.......
T Consensus 321 ~iwd~~~~~~~ 331 (410)
T 1vyh_C 321 KMWDVSTGMCL 331 (410)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCceE
Confidence 99987765443
No 183
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.51 E-value=0.18 Score=41.87 Aligned_cols=105 Identities=10% Similarity=0.035 Sum_probs=66.8
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC
Q 024317 105 KPKSFAVDMKGNIYVADKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ 181 (269)
Q Consensus 105 ~P~giavd~~G~lyVaD~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~ 181 (269)
....+++.+++.++.+ ...+.|+.++.. +. ..+.+. -.....++++++ +.|+.+. .++
T Consensus 186 ~i~~~~~~~~~~~~~~-~~dg~i~i~d~~~~~~~~~~~~~----------------~~~i~~~~~~~~-~~l~~~~-~dg 246 (313)
T 3odt_A 186 VVRHLAVVDDGHFISC-SNDGLIKLVDMHTGDVLRTYEGH----------------ESFVYCIKLLPN-GDIVSCG-EDR 246 (313)
T ss_dssp CEEEEEEEETTEEEEE-ETTSEEEEEETTTCCEEEEEECC----------------SSCEEEEEECTT-SCEEEEE-TTS
T ss_pred cEEEEEEcCCCeEEEc-cCCCeEEEEECCchhhhhhhhcC----------------CceEEEEEEecC-CCEEEEe-cCC
Confidence 4567889888885544 457899999964 43 333221 134578999997 5655554 468
Q ss_pred eEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCccccc
Q 024317 182 LIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRLDPPL 242 (269)
Q Consensus 182 ~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~~~~~ 242 (269)
.|+.++............ .-.....+++.++|.+.++..+|.+.-..
T Consensus 247 ~v~iwd~~~~~~~~~~~~--------------~~~~i~~~~~~~~~~~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 247 TVRIWSKENGSLKQVITL--------------PAISIWSVDCMSNGDIIVGSSDNLVRIFS 293 (313)
T ss_dssp EEEEECTTTCCEEEEEEC--------------SSSCEEEEEECTTSCEEEEETTSCEEEEE
T ss_pred EEEEEECCCCceeEEEec--------------cCceEEEEEEccCCCEEEEeCCCcEEEEe
Confidence 899999766544332211 01235678888888877777776665444
No 184
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.078 Score=46.27 Aligned_cols=122 Identities=10% Similarity=-0.034 Sum_probs=74.4
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCC-CEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG-NIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G-~lyVaD~~n 124 (269)
....+++++.++.++++-...+.|..+|+ ..++.......... ....-.....+++++++ .++++-...
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~---~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~~l~~~~~d 236 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDL---KAKKEVIHLSYTSP-------NSGIKQQLSVVEWHPKNSTRVATATGS 236 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEET---TTTEEEEEECCCCC-------SSCCCCCEEEEEECSSCTTEEEEEECC
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEEC---CCCCcceEEecccc-------ccccCCceEEEEECCCCCCEEEEEECC
Confidence 45678997655788888777888999986 34443333211000 00012346789999987 466665555
Q ss_pred C---EEEEEeCCcc----eEEe-cCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 125 H---VIRKITNLGV----TTIA-GGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 125 ~---~I~~~~~~g~----~~~~-g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
+ .|+.++.... ..+. +. -.....++++|.++.++++-..++.|+.++......
T Consensus 237 ~~~~~i~~~d~~~~~~~~~~~~~~~----------------~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~ 297 (416)
T 2pm9_A 237 DNDPSILIWDLRNANTPLQTLNQGH----------------QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ 297 (416)
T ss_dssp SSSCCCCEEETTSTTSCSBCCCSCC----------------SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE
T ss_pred CCCceEEEEeCCCCCCCcEEeecCc----------------cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc
Confidence 5 8888885431 1111 11 234678999983366666666678999999776543
No 185
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.42 E-value=0.053 Score=47.31 Aligned_cols=115 Identities=11% Similarity=0.001 Sum_probs=68.8
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~n~ 125 (269)
...|++++ ++..+++-...+.|+.+|. .+++...... ..-.....+++.+++. ++++-..++
T Consensus 142 V~~v~~sp-dg~~l~sgs~dg~v~iwd~---~~~~~~~~~~-------------~h~~~v~~v~~s~~~~~~~~s~~~dg 204 (357)
T 4g56_B 142 VKTLSVFS-DGTQAVSGGKDFSVKVWDL---SQKAVLKSYN-------------AHSSEVNCVAACPGKDTIFLSCGEDG 204 (357)
T ss_dssp EEEEEECS-SSSEEEEEETTSCEEEEET---TTTEEEEEEC-------------CCSSCEEEEEECTTCSSCEEEEETTS
T ss_pred EEEEEECC-CCCEEEEEeCCCeEEEEEC---CCCcEEEEEc-------------CCCCCEEEEEEccCCCceeeeeccCC
Confidence 35677865 5565566556677888874 3444333221 1122446788887765 677666677
Q ss_pred EEEEEeCCc-c-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 126 VIRKITNLG-V-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 126 ~I~~~~~~g-~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
.|+.+|... . ....... ..-..+..++++|+++.++++-..++.|+.++....
T Consensus 205 ~v~~wd~~~~~~~~~~~~~-------------~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~ 259 (357)
T 4g56_B 205 RILLWDTRKPKPATRIDFC-------------ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP 259 (357)
T ss_dssp CEEECCTTSSSCBCBCCCT-------------TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG
T ss_pred ceEEEECCCCceeeeeeec-------------cccccccchhhhhcccceEEEeecccceeEEECCCC
Confidence 888887532 2 1111000 011346789999886777766556778999987654
No 186
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.32 E-value=0.44 Score=40.83 Aligned_cols=115 Identities=10% Similarity=0.041 Sum_probs=68.0
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
-..+++++ ++.+.++-...+.|+.+|+ .+++ +..+.+. -.....++++++|+.+++=...+
T Consensus 79 V~~~~~~~-~~~~l~s~s~D~~v~lwd~---~~~~~~~~~~~h--------------~~~v~~v~~sp~~~~l~s~~~d~ 140 (343)
T 2xzm_R 79 VSDLALSQ-ENCFAISSSWDKTLRLWDL---RTGTTYKRFVGH--------------QSEVYSVAFSPDNRQILSAGAER 140 (343)
T ss_dssp EEEEEECS-STTEEEEEETTSEEEEEET---TSSCEEEEEECC--------------CSCEEEEEECSSTTEEEEEETTS
T ss_pred eEEEEECC-CCCEEEEEcCCCcEEEEEC---CCCcEEEEEcCC--------------CCcEEEEEECCCCCEEEEEcCCC
Confidence 35678864 6667777777888999986 3444 3344322 12346799999998776666678
Q ss_pred EEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCC---------CEEEEEECCCCeEEEEECCCC
Q 024317 126 VIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHI---------CALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 126 ~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~---------g~LyVaD~~n~~I~~~~~~~~ 191 (269)
.|+.++..+. ........ ..-.....++++|+. +.++++-...+.|+.++....
T Consensus 141 ~i~~wd~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 204 (343)
T 2xzm_R 141 EIKLWNILGECKFSSAEKE------------NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ 204 (343)
T ss_dssp CEEEEESSSCEEEECCTTT------------SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTE
T ss_pred EEEEEeccCCceeeeeccc------------CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCc
Confidence 8999987654 22111000 001223456666652 134555555678888885543
No 187
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.31 E-value=0.35 Score=42.19 Aligned_cols=156 Identities=11% Similarity=0.117 Sum_probs=89.2
Q ss_pred ceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEeCCCCE
Q 024317 48 HSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADKSNHV 126 (269)
Q Consensus 48 ~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD~~n~~ 126 (269)
..+++.+.++..+++-+..+.|..+|+ .+++.....+... ....-.....+++.+ +++++++=...+.
T Consensus 161 ~~~~~~~~~~~~l~s~s~D~~i~~wd~---~~~~~~~~~~~~~--------~~~h~~~v~~~~~~~~~~~~l~sgs~D~~ 229 (380)
T 3iz6_a 161 SSCQYVPDQETRLITGSGDQTCVLWDV---TTGQRISIFGSEF--------PSGHTADVLSLSINSLNANMFISGSCDTT 229 (380)
T ss_dssp CCCBCCSSSSSCEEEECTTSCEEEECT---TTCCEEEEECCCS--------SSSCCSCEEEEEECSSSCCEEEEEETTSC
T ss_pred EEEEEecCCCCEEEEECCCCcEEEEEc---CCCcEEEEeeccc--------CCCCccCeEEEEeecCCCCEEEEEECCCe
Confidence 344554545566677777788999975 3454443332110 001112345677765 7788888777889
Q ss_pred EEEEeCC--cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 127 IRKITNL--GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 127 I~~~~~~--g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
|+.+|.. +. ..+.+. -...+.|+++|+ +..+++-...+.|+.++...............
T Consensus 230 v~~wd~~~~~~~~~~~~~h----------------~~~v~~v~~~p~-~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~ 292 (380)
T 3iz6_a 230 VRLWDLRITSRAVRTYHGH----------------EGDINSVKFFPD-GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPD 292 (380)
T ss_dssp EEEEETTTTCCCCEEECCC----------------SSCCCEEEECTT-SSEEEEECSSSCEEEEETTTTEEEEEECCCCS
T ss_pred EEEEECCCCCcceEEECCc----------------CCCeEEEEEecC-CCeEEEEcCCCeEEEEECCCCcEEEEeccccc
Confidence 9999853 22 344332 123578999998 67777777788999999887655433222101
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRL 238 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~ 238 (269)
.... .......+++.++|++.++- .+|.+
T Consensus 293 ~~~~-------~~~~v~~~~~s~~g~~l~~g~~dg~i 322 (380)
T 3iz6_a 293 RNDN-------ELPIVTSVAFSISGRLLFAGYSNGDC 322 (380)
T ss_dssp SSCC-------SSCSCSEEEECSSSSEEEEECTTSCE
T ss_pred cccc-------ccCceEEEEECCCCCEEEEEECCCCE
Confidence 1000 11224567777777544443 34433
No 188
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.31 E-value=0.27 Score=42.18 Aligned_cols=73 Identities=14% Similarity=0.219 Sum_probs=52.0
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC
Q 024317 105 KPKSFAVDMKGNIYVADKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ 181 (269)
Q Consensus 105 ~P~giavd~~G~lyVaD~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~ 181 (269)
....+++.+++.++++-...+.|+.+|.. +. .++.+. -...++|+++|+ +.++++-...+
T Consensus 186 ~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h----------------~~~v~~v~~~p~-~~~l~s~s~d~ 248 (340)
T 1got_B 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH----------------ESDINAICFFPN-GNAFATGSDDA 248 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCC----------------SSCEEEEEECTT-SSEEEEEETTS
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCC----------------cCCEEEEEEcCC-CCEEEEEcCCC
Confidence 34679999999988888778899999853 43 333322 124578999998 56666666678
Q ss_pred eEEEEECCCCeEE
Q 024317 182 LIRQINLKPEDCS 194 (269)
Q Consensus 182 ~I~~~~~~~~~~~ 194 (269)
.|+.++.......
T Consensus 249 ~v~iwd~~~~~~~ 261 (340)
T 1got_B 249 TCRLFDLRADQEL 261 (340)
T ss_dssp CEEEEETTTTEEE
T ss_pred cEEEEECCCCcEE
Confidence 8999998765543
No 189
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.23 E-value=0.32 Score=41.19 Aligned_cols=113 Identities=6% Similarity=0.033 Sum_probs=73.1
Q ss_pred CcceEEEecCC--CeEEEEeCCCCEEEEEecCCCCCccE--EEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEe
Q 024317 46 NPHSVIDRPGS--SDLIVLDSSRSAFYTLSFPLSEESVV--KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (269)
Q Consensus 46 ~P~giav~~~~--g~lyV~D~~~~~I~~~dl~~~~~g~~--~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD 121 (269)
.-..+++++.. +.++++-...+.|+.+|+. ..+.. ..+.+. -.....+++.++++++++=
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~h--------------~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQ--DSGQTIPKAQQMH--------------TGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEEC--TTSCEEEEEEEEC--------------SSCEEEEEECTTSSEEEEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcC--CCCceeEEEeccc--------------cCCEEEEEECcCCCEEEEE
Confidence 45778997654 6777777778889999863 32433 233221 2245789999999866666
Q ss_pred CCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEE--eCCCCEEEEEECCCCeEEEEECCCC
Q 024317 122 KSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTF--VPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 122 ~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~--~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
..++.|+.++.... ....+. -.....+++ +++ +.++++-..++.|+.++....
T Consensus 105 ~~dg~v~iwd~~~~~~~~~~~~----------------~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQAIQIAQH----------------DAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp ETTSEEEEEETTTTEEEEEEEC----------------SSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCS
T ss_pred cCCCcEEEEEcCCCCceeeccc----------------cCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCC
Confidence 66789999996544 333322 123467887 666 665555555678888887654
No 190
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.20 E-value=0.035 Score=48.50 Aligned_cols=115 Identities=9% Similarity=0.029 Sum_probs=70.8
Q ss_pred CcceEEEecCCCeEEEEeCCCC---EEEEEecCCCCCccEEEEEcCCcccCCCCCccc-ccCCCCceEEEcC-CCCEEEE
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRS---AFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGS-ARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~---~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~-~~~~~P~giavd~-~G~lyVa 120 (269)
....+++++.+..++++-...+ .|+.+|+. ......... . ..-.....+++++ ++.++++
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~--~~~~~~~~~-------------~~~~~~~v~~~~~s~~~~~~l~s 280 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLR--NANTPLQTL-------------NQGHQKGILSLDWCHQDEHLLLS 280 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETT--STTSCSBCC-------------CSCCSSCEEEEEECSSCSSCEEE
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCC--CCCCCcEEe-------------ecCccCceeEEEeCCCCCCeEEE
Confidence 3567888764445555555444 77777752 111111100 0 1123457899988 8887777
Q ss_pred eCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 121 DKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 121 D~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
-...+.|+.++.. +. ..+.+. -.....++++|++..++++-...+.|+.++....
T Consensus 281 ~~~dg~v~~wd~~~~~~~~~~~~~----------------~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 281 SGRDNTVLLWNPESAEQLSQFPAR----------------GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EESSSEEEEECSSSCCEEEEEECS----------------SSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred EeCCCCEEEeeCCCCccceeecCC----------------CCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 6678899999954 33 333322 1235689999984367777777889999997654
No 191
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.18 E-value=0.18 Score=43.65 Aligned_cols=145 Identities=12% Similarity=0.074 Sum_probs=85.9
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
...+++.+ ++. +++-...+.|+.+|+. .++ +..+.+ .-.....+++++++.++++-...+
T Consensus 209 ~~~~~~~~-~~~-~~~~~~~g~i~~~d~~---~~~~~~~~~~--------------~~~~i~~~~~~~~~~~l~~~~~d~ 269 (425)
T 1r5m_A 209 GVDVEWVD-DDK-FVIPGPKGAIFVYQIT---EKTPTGKLIG--------------HHGPISVLEFNDTNKLLLSASDDG 269 (425)
T ss_dssp BSCCEEEE-TTE-EEEECGGGCEEEEETT---CSSCSEEECC--------------CSSCEEEEEEETTTTEEEEEETTS
T ss_pred eeEEEEcC-CCE-EEEEcCCCeEEEEEcC---CCceeeeecc--------------CCCceEEEEECCCCCEEEEEcCCC
Confidence 56677754 444 4555556778888752 222 222211 112346799999998777666678
Q ss_pred EEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 126 VIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 126 ~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
.|+.++... . ..+.+. -.....++++++ + ++++-...+.|+.++............
T Consensus 270 ~i~i~d~~~~~~~~~~~~~----------------~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~--- 328 (425)
T 1r5m_A 270 TLRIWHGGNGNSQNCFYGH----------------SQSIVSASWVGD-D-KVISCSMDGSVRLWSLKQNTLLALSIV--- 328 (425)
T ss_dssp CEEEECSSSBSCSEEECCC----------------SSCEEEEEEETT-T-EEEEEETTSEEEEEETTTTEEEEEEEC---
T ss_pred EEEEEECCCCccceEecCC----------------CccEEEEEECCC-C-EEEEEeCCCcEEEEECCCCcEeEeccc---
Confidence 899998543 3 333221 124578999997 5 555555678999999876554332211
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEE-cCCCCccccc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYII-RHTGRLDPPL 242 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVa-d~~g~~~~~~ 242 (269)
.-.....+++.++|+++++ ..+|.+....
T Consensus 329 -----------~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~ 358 (425)
T 1r5m_A 329 -----------DGVPIFAGRISQDGQKYAVAFMDGQVNVYD 358 (425)
T ss_dssp -----------TTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred -----------CCccEEEEEEcCCCCEEEEEECCCeEEEEE
Confidence 0123567788888854444 3555555443
No 192
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.51 Score=40.10 Aligned_cols=120 Identities=11% Similarity=0.057 Sum_probs=64.0
Q ss_pred CcceEEEecCC-CeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-----------
Q 024317 46 NPHSVIDRPGS-SDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM----------- 113 (269)
Q Consensus 46 ~P~giav~~~~-g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~----------- 113 (269)
....+++++.+ +.++++-...+.|..+|+.....-....+.+ .-.....+++++
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~~~~~~~~ 168 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA--------------HAIGVNSASWAPATIEEDGEHNG 168 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC--------------CTTCEEEEEECCCC---------
T ss_pred ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC--------------CCCceEEEEEcCccccccccccC
Confidence 34667775431 5555555556777777653111111222211 112335677776
Q ss_pred --CCCEEEEeCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCC--CEEEEEECCCCeEEEE
Q 024317 114 --KGNIYVADKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHI--CALLISDHGNQLIRQI 186 (269)
Q Consensus 114 --~G~lyVaD~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~--g~LyVaD~~n~~I~~~ 186 (269)
++.++++-...+.|+.++.. +. ......-. ..-.....++++|+. +.++++-...+.|+.+
T Consensus 169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------------~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iw 236 (379)
T 3jrp_A 169 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE------------GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 236 (379)
T ss_dssp -CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC------------CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe------------cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEE
Confidence 57777666667788888742 21 11111000 001345789999973 4555555556789888
Q ss_pred ECCCC
Q 024317 187 NLKPE 191 (269)
Q Consensus 187 ~~~~~ 191 (269)
+....
T Consensus 237 d~~~~ 241 (379)
T 3jrp_A 237 TQDNE 241 (379)
T ss_dssp EESST
T ss_pred eCCCC
Confidence 87664
No 193
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.15 E-value=0.21 Score=47.97 Aligned_cols=111 Identities=10% Similarity=0.045 Sum_probs=71.7
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
...+++++|++..|.++ ..++.|..+|. .++. +..+.+. -.....++++++|..+++=...
T Consensus 15 ~v~~i~~sp~~~~la~~-~~~g~v~iwd~---~~~~~~~~~~~~--------------~~~v~~~~~s~~~~~l~~~~~d 76 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTT-LYSGRVEIWNY---ETQVEVRSIQVT--------------ETPVRAGKFIARKNWIIVGSDD 76 (814)
T ss_dssp CEEEEEECSSSSEEEEE-ETTSEEEEEET---TTTEEEEEEECC--------------SSCEEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEECCCCCEEEEE-eCCCEEEEEEC---CCCceEEEEecC--------------CCcEEEEEEeCCCCEEEEEeCC
Confidence 57889998744445444 45788999975 3454 3333322 1234689999999865555557
Q ss_pred CEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 125 HVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 125 ~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
+.|++++.. +. ..+.+. -.....++++|++..|+++. .++.|+.++.+..
T Consensus 77 g~i~vw~~~~~~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEAH----------------PDYIRSIAVHPTKPYVLSGS-DDLTVKLWNWENN 129 (814)
T ss_dssp SEEEEEETTTCCEEEEEECC----------------SSCEEEEEECSSSSEEEEEE-TTSEEEEEEGGGT
T ss_pred CeEEEEECCCCcEEEEEecC----------------CCCEEEEEEeCCCCEEEEEc-CCCEEEEEECCCC
Confidence 899999954 44 333322 13467899999844555555 4678999997765
No 194
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.13 E-value=0.58 Score=40.74 Aligned_cols=60 Identities=12% Similarity=-0.022 Sum_probs=40.1
Q ss_pred CceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEc
Q 024317 160 NDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR 233 (269)
Q Consensus 160 ~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad 233 (269)
..+.++++|+ |.++++-...+.|+.++............ + .-.....+++.++|++.++-
T Consensus 271 ~V~~~~~Spd-g~~lasgs~D~~V~iwd~~~~~~~~~~~~----g---------H~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 271 GITSMDVDMK-GELAVLASNDNSIALVKLKDLSMSKIFKQ----A---------HSFAITEVTISPDSTYVASV 330 (365)
T ss_dssp CEEEEEECTT-SCEEEEEETTSCEEEEETTTTEEEEEETT----S---------SSSCEEEEEECTTSCEEEEE
T ss_pred CeEeEEECCC-CCceEEEcCCCEEEEEECCCCcEEEEecC----c---------ccCCEEEEEECCCCCEEEEE
Confidence 3578999998 55555555567899999877654432111 0 11346789999999877764
No 195
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.11 E-value=0.62 Score=40.56 Aligned_cols=131 Identities=18% Similarity=0.160 Sum_probs=70.3
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
....+++++ ++.++++-...+.|+.+|+. ....+..+.+. -.....+++++++.++++-...+
T Consensus 141 ~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~--~~~~~~~~~~h--------------~~~v~~~~~~~~~~~l~s~~~d~ 203 (420)
T 3vl1_A 141 EITKLKFFP-SGEALISSSQDMQLKIWSVK--DGSNPRTLIGH--------------RATVTDIAIIDRGRNVLSASLDG 203 (420)
T ss_dssp CEEEEEECT-TSSEEEEEETTSEEEEEETT--TCCCCEEEECC--------------SSCEEEEEEETTTTEEEEEETTS
T ss_pred ccEEEEECC-CCCEEEEEeCCCeEEEEeCC--CCcCceEEcCC--------------CCcEEEEEEcCCCCEEEEEcCCC
Confidence 446678865 45555555566778888752 22223333221 22456789989998766666678
Q ss_pred EEEEEeCC-cc--eEEecCCCCCCC--------CCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEE
Q 024317 126 VIRKITNL-GV--TTIAGGGSKKEG--------RADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCS 194 (269)
Q Consensus 126 ~I~~~~~~-g~--~~~~g~~~~~~~--------~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~ 194 (269)
.|+.++.. +. ..+......... ..........-.....++++++ +.++++-..++.|+.++.......
T Consensus 204 ~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~ 282 (420)
T 3vl1_A 204 TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY-GKYVIAGHVSGVITVHNVFSKEQT 282 (420)
T ss_dssp CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT-TEEEEEEETTSCEEEEETTTCCEE
T ss_pred cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC-CCEEEEEcCCCeEEEEECCCCcee
Confidence 88888854 43 333221100000 0000000001123345667777 555555555778999998765433
No 196
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.11 E-value=0.52 Score=39.63 Aligned_cols=117 Identities=13% Similarity=0.058 Sum_probs=67.2
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC--CCCEEEEeCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM--KGNIYVADKSN 124 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~--~G~lyVaD~~n 124 (269)
-..++++|.++.++++-...+.|..+|+. .......+... .-..-..+.+.+ ++.++++-...
T Consensus 143 v~~v~~~p~~~~~l~sgs~D~~v~iwd~~--~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~l~s~s~D 207 (304)
T 2ynn_A 143 VMCVAFNPKDPSTFASGCLDRTVKVWSLG--QSTPNFTLTTG-------------QERGVNYVDYYPLPDKPYMITASDD 207 (304)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEETT--CSSCSEEEECC-------------CTTCEEEEEECCSTTCCEEEEEETT
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECC--CCCccceeccC-------------CcCcEEEEEEEEcCCCCEEEEEcCC
Confidence 35667765556666666666777777752 11111111110 001112344543 56666666667
Q ss_pred CEEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEE
Q 024317 125 HVIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSK 195 (269)
Q Consensus 125 ~~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~ 195 (269)
+.|+.+|... . .++.+. -.....++++|+ +.++++-...+.|+.++........
T Consensus 208 ~~i~iWd~~~~~~~~~~~~h----------------~~~v~~~~~~p~-~~~l~s~s~Dg~i~iWd~~~~~~~~ 264 (304)
T 2ynn_A 208 LTIKIWDYQTKSCVATLEGH----------------MSNVSFAVFHPT-LPIIISGSEDGTLKIWNSSTYKVEK 264 (304)
T ss_dssp SEEEEEETTTTEEEEEEECC----------------SSCEEEEEECSS-SSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CeEEEEeCCCCccceeeCCC----------------CCCEEEEEECCC-CCEEEEEcCCCeEEEEECCCCceee
Confidence 8899998543 3 344332 233467889997 5666666667889999987655443
No 197
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.10 E-value=0.51 Score=44.18 Aligned_cols=122 Identities=18% Similarity=0.153 Sum_probs=74.0
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
...++++|.+...+++-...+.|..+|. ..++....... .-.....+++.++|.++++=...+.
T Consensus 150 v~~v~f~p~~~~~l~s~s~D~~v~lwd~---~~~~~~~~l~~-------------H~~~V~~v~fspdg~~las~s~D~~ 213 (611)
T 1nr0_A 150 MNSVDFKPSRPFRIISGSDDNTVAIFEG---PPFKFKSTFGE-------------HTKFVHSVRYNPDGSLFASTGGDGT 213 (611)
T ss_dssp EEEEEECSSSSCEEEEEETTSCEEEEET---TTBEEEEEECC-------------CSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ceEEEECCCCCeEEEEEeCCCeEEEEEC---CCCeEeeeecc-------------ccCceEEEEECCCCCEEEEEECCCc
Confidence 4567776644445666666777777763 34443332211 1224578999999998888777889
Q ss_pred EEEEeC-Ccc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 127 IRKITN-LGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 127 I~~~~~-~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
|+.++. +|. .......... ..+.-....+++++|+ +.++++-...+.|+.++......
T Consensus 214 i~lwd~~~g~~~~~~~~~~~~--------~~~h~~~V~~v~~spd-g~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 214 IVLYNGVDGTKTGVFEDDSLK--------NVAHSGSVFGLTWSPD-GTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp EEEEETTTCCEEEECBCTTSS--------SCSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEECCCCcEeeeecccccc--------ccccCCCEEEEEECCC-CCEEEEEeCCCeEEEEeCCCCce
Confidence 999984 454 2222110000 0001234678999998 66666666678899999876543
No 198
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.10 E-value=0.17 Score=47.42 Aligned_cols=109 Identities=9% Similarity=0.008 Sum_probs=64.4
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeE
Q 024317 105 KPKSFAVDMKGNIYVADKSNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLI 183 (269)
Q Consensus 105 ~P~giavd~~G~lyVaD~~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I 183 (269)
....|++.++|.+.++-...+.|+.++.... ....... .. ..-...+.++++|+ +..+++-...+.|
T Consensus 493 ~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~-~~----------~H~~~V~~v~fspd-g~~lasgs~D~~v 560 (611)
T 1nr0_A 493 EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNS-WT----------FHTAKVACVSWSPD-NVRLATGSLDNSV 560 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCC-CC----------CCSSCEEEEEECTT-SSEEEEEETTSCE
T ss_pred ceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeee-ee----------ecccceeEEEECCC-CCEEEEEECCCcE
Confidence 4578999999997777667788888885431 1111000 00 00134578999998 6666665567789
Q ss_pred EEEECCCCe-EE-EecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCc
Q 024317 184 RQINLKPED-CS-KSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRL 238 (269)
Q Consensus 184 ~~~~~~~~~-~~-~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~ 238 (269)
+.++.+... .. ..... .. ......+++.++|.|..+..++.+
T Consensus 561 ~lW~~~~~~~~~~~~~~~---h~----------~~~v~~v~fs~d~~l~s~~~D~~i 604 (611)
T 1nr0_A 561 IVWNMNKPSDHPIIIKGA---HA----------MSSVNSVIWLNETTIVSAGQDSNI 604 (611)
T ss_dssp EEEETTCTTSCCEEETTS---ST----------TSCEEEEEEEETTEEEEEETTSCE
T ss_pred EEEECCCcccccchhhcc---Cc----------ccCeeEEEEcCCCEEEEecCCCCE
Confidence 999986532 11 11110 00 133567788888885555555443
No 199
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.09 E-value=0.41 Score=45.29 Aligned_cols=108 Identities=12% Similarity=0.163 Sum_probs=62.8
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~ 123 (269)
..+..++++|+ +.+.++. ++.|+.+|+ .+++...+.... ..+..++++++|+ |+++ .
T Consensus 82 ~~v~~~~~spd-~~~~~~~--~~~i~~~d~---~~~~~~~l~~~~--------------~~~~~~~~SpdG~~la~~--~ 139 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT--QGGLVGFDM---LARKVTYLFDTN--------------EETASLDFSPVGDRVAYV--R 139 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE--TTEEEEEET---TTTEEEEEECCT--------------TCCTTCEECTTSSEEEEE--E
T ss_pred cCceeEEECCC-CeEEEEE--CCEEEEEEC---CCCceEEccCCc--------------ccccCCcCCCCCCEEEEE--E
Confidence 35788999876 7777664 388999985 456655544221 1345678888887 4443 3
Q ss_pred CCEEEEEeCCc------c-eEEecCCCCCC--CCCCCccccccccCceEEEEeCCCCEEEEEE
Q 024317 124 NHVIRKITNLG------V-TTIAGGGSKKE--GRADGPAQNASFSNDFELTFVPHICALLISD 177 (269)
Q Consensus 124 n~~I~~~~~~g------~-~~~~g~~~~~~--~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD 177 (269)
++.|+.++.++ . ..+...+.... +.+ ..+..+..+.+++++|++..|+++.
T Consensus 140 ~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~---~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 140 NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQA---VHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSC---CGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred CCeEEEEecCcccccCCCcEEeccCCCCCeEcccc---hhhhhcCCCceEEECCCCCEEEEEE
Confidence 46788887543 3 32222111100 000 1122355678999999976777764
No 200
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=96.08 E-value=0.062 Score=49.93 Aligned_cols=104 Identities=8% Similarity=0.009 Sum_probs=60.1
Q ss_pred ceEEEcCCCCEEE--Ee-CCC-CEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC
Q 024317 107 KSFAVDMKGNIYV--AD-KSN-HVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN 180 (269)
Q Consensus 107 ~giavd~~G~lyV--aD-~~n-~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n 180 (269)
..++++++|...+ ++ ..+ ..|++++.+ |. ..+.+.. .....++++|++..|+.++..+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~----------------~~~~~~~~SpDG~~l~~~~~~~ 216 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGE----------------GSFSSASISPGMKVTAGLETAR 216 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSS----------------CEEEEEEECTTSCEEEEEECSS
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCC----------------CccccceECCCCCEEEEccCCC
Confidence 6788999998444 22 222 568889854 44 5554321 1236889999966778666543
Q ss_pred -CeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEc
Q 024317 181 -QLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR 233 (269)
Q Consensus 181 -~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad 233 (269)
.+|++++.+++........ . ... .......+...+++++|.+|++-
T Consensus 217 ~~~i~~~d~~~~~~~~~~~~----~-~~~--~~~~~~~~~~~~~spdg~~~~~~ 263 (582)
T 3o4h_A 217 EARLVTVDPRDGSVEDLELP----S-KDF--SSYRPTAITWLGYLPDGRLAVVA 263 (582)
T ss_dssp CEEEEEECTTTCCEEECCCS----C-SHH--HHHCCSEEEEEEECTTSCEEEEE
T ss_pred eeEEEEEcCCCCcEEEccCC----C-cCh--hhhhhccccceeEcCCCcEEEEE
Confidence 3799999887765522111 0 000 00011223455578888666654
No 201
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.07 E-value=0.42 Score=45.78 Aligned_cols=115 Identities=12% Similarity=0.050 Sum_probs=67.5
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC--CCCEEEEeCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM--KGNIYVADKSN 124 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~--~G~lyVaD~~n 124 (269)
...++++|.++..+++-...+.|..+|+. .......+... .-.....+++.+ ++.++++-..+
T Consensus 143 v~~~~~~p~~~~~l~~~~~dg~v~vwd~~--~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~l~~~~~d 207 (814)
T 3mkq_A 143 VMCVAFNPKDPSTFASGCLDRTVKVWSLG--QSTPNFTLTTG-------------QERGVNYVDYYPLPDKPYMITASDD 207 (814)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEETT--CSSCSEEEECC-------------CTTCCCEEEECCSTTCCEEEEECTT
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCcceeEEecC-------------CCCCEEEEEEEECCCCCEEEEEeCC
Confidence 45566654355555555556667777642 11111111110 112446688877 88877777778
Q ss_pred CEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 125 HVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 125 ~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
+.|+.++.. +. ..+.+. -.....++++|+ +.++++-..++.|+.++......
T Consensus 208 g~i~~~d~~~~~~~~~~~~~----------------~~~v~~~~~~~~-~~~l~~~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 208 LTIKIWDYQTKSCVATLEGH----------------MSNVSFAVFHPT-LPIIISGSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp SEEEEEETTTTEEEEEEECC----------------SSCEEEEEECSS-SSEEEEEETTSCEEEEETTTCSE
T ss_pred CEEEEEECCCCcEEEEEcCC----------------CCCEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcE
Confidence 899999854 33 333221 234578899987 55555555567899998876543
No 202
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.07 E-value=0.57 Score=44.55 Aligned_cols=167 Identities=10% Similarity=0.030 Sum_probs=91.2
Q ss_pred CCCcceEEEecCCCeEEEEeCCCC-----EEEEEecCCCCCccEEEEEcCC-cc----cCC-CCCccc--ccC---CCCc
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRS-----AFYTLSFPLSEESVVKRLAGDG-VQ----GYS-DGEPGS--ARF---DKPK 107 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~-----~I~~~dl~~~~~g~~~~~~g~g-~~----g~~-dg~~~~--~~~---~~P~ 107 (269)
...+..++++|++..|+++....+ .|+.+|+ .+|+...+.... .. ... +..... ..+ ....
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDI---GSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEET---TTCCEEEEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEEC---CCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 446889999876666777765233 8999985 456655444221 00 000 000000 000 1246
Q ss_pred eEEEcCCCC-EEEEeCCCCEEEEEeCCc----c-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC
Q 024317 108 SFAVDMKGN-IYVADKSNHVIRKITNLG----V-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ 181 (269)
Q Consensus 108 giavd~~G~-lyVaD~~n~~I~~~~~~g----~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~ 181 (269)
.++++++|. |+++.. +.|+.++.++ . ..+... -..+..++++|++..|+++. ++
T Consensus 113 ~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~----------------~~~~~~~~~SPDG~~la~~~--~~ 172 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHG----------------EGFATDAKLSPKGGFVSFIR--GR 172 (741)
T ss_dssp CCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCS----------------SSCEEEEEECTTSSEEEEEE--TT
T ss_pred eeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccC----------------CcccccccCCCCCCEEEEEe--CC
Confidence 789999998 666654 7888888543 2 111111 12467899999966676665 35
Q ss_pred eEEEEECCCCeEEEecccCccC--CCcccceeeeeccceeeEEEecCC-cEEEEc
Q 024317 182 LIRQINLKPEDCSKSSQSGSAL--GAVSVWVLVSVLSCLVSLVIGFVA-RPYIIR 233 (269)
Q Consensus 182 ~I~~~~~~~~~~~~~~~~g~~~--g~~~~~~~~~~l~~p~gia~d~~g-~lyVad 233 (269)
.|+.++.+++........+... .....|.....+..+.++++.+|| .|+++.
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEE
Confidence 7999998887655443221000 000011100112346789999999 466664
No 203
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.07 E-value=0.67 Score=40.55 Aligned_cols=74 Identities=12% Similarity=0.043 Sum_probs=52.1
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEEC--C
Q 024317 105 KPKSFAVDMKGNIYVADKSNHVIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDH--G 179 (269)
Q Consensus 105 ~P~giavd~~G~lyVaD~~n~~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~--~ 179 (269)
...++++++++.++++-...+.|+.++.... ..+.+. -.....++++|++..++++-. .
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~----------------~~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNH----------------NAAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCC----------------SSCCCEEEECTTSTTEEEEECCTT
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCC----------------cceEEEEEECCCCCCEEEEecCCC
Confidence 4578999999987777666788999986543 222221 134578999997677888754 5
Q ss_pred CCeEEEEECCCCeEE
Q 024317 180 NQLIRQINLKPEDCS 194 (269)
Q Consensus 180 n~~I~~~~~~~~~~~ 194 (269)
++.|+.++.......
T Consensus 283 d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 283 DKQIHFWNAATGARV 297 (401)
T ss_dssp TCEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCCEE
Confidence 788999998765443
No 204
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.07 E-value=0.44 Score=45.21 Aligned_cols=121 Identities=15% Similarity=0.151 Sum_probs=79.0
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCC--CccE-EEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEe
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSE--ESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~--~g~~-~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD 121 (269)
..-..|++++.+++++++-+..+.|..+++.... .+.. ..+.|. -..-.+++++++|++.++=
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h--------------~~~v~~v~~s~~g~~l~sg 448 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH--------------SHFVEDVVLSSDGQFALSG 448 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECC--------------SSCEEEEEECTTSSEEEEE
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCC--------------CCcEEEEEECCCCCEEEEE
Confidence 3457788866567888888888999999863111 1221 122211 2244679999999988877
Q ss_pred CCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEe
Q 024317 122 KSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKS 196 (269)
Q Consensus 122 ~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~ 196 (269)
...+.|+.++.. +. ..+.+. -....+++++++ +..+++-...+.|+.++..+......
T Consensus 449 s~Dg~v~vwd~~~~~~~~~~~~h----------------~~~v~~~~~s~~-~~~l~s~s~D~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 449 SWDGELRLWDLAAGVSTRRFVGH----------------TKDVLSVAFSLD-NRQIVSASRDRTIKLWNTLGECKYTI 509 (694)
T ss_dssp ETTSEEEEEETTTTEEEEEEECC----------------SSCEEEEEECTT-SSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred eCCCcEEEEECCCCcceeEEeCC----------------CCCEEEEEEeCC-CCEEEEEeCCCEEEEEECCCCcceee
Confidence 778899999954 43 344332 123578999998 55555555578899999877654443
No 205
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.06 E-value=0.28 Score=43.85 Aligned_cols=116 Identities=14% Similarity=0.098 Sum_probs=71.0
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS 123 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~ 123 (269)
...++++++.+..|+++-...+.|..||+.. .++. +..+.+. ..-..+.+++++++|. |++++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~-~~~~~~~~~~~~------------~~~~~v~~~~~sp~~~~l~~~~~- 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDK-TSKNVLKLRKRF------------CFSKRPNAISIAEDDTTVIIADK- 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECS-SSSSCEEEEEEE------------ECSSCEEEEEECTTSSEEEEEET-
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcC-CCCceeeeeecc------------cCCCCceEEEEcCCCCEEEEEeC-
Confidence 4678999875555567776778898888631 1333 3333211 0113567899999998 555554
Q ss_pred CCEEEEEeCCc-c-e-----EEecCCCCCCCCCCCccccccccCceEEEEeCC---CCEEEEEECCCCeEEEEECCCCe
Q 024317 124 NHVIRKITNLG-V-T-----TIAGGGSKKEGRADGPAQNASFSNDFELTFVPH---ICALLISDHGNQLIRQINLKPED 192 (269)
Q Consensus 124 n~~I~~~~~~g-~-~-----~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~---~g~LyVaD~~n~~I~~~~~~~~~ 192 (269)
.+.|+.++... . . .+.+ .-...++|+++|+ +..|+.++. .+.|+.++.....
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~----------------h~~~v~~~~~sp~~~~~~~l~s~~~-d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILG----------------HVSMLTDVHLIKDSDGHQFIITSDR-DEHIKISHYPQCF 231 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEE----------------CSSCEEEEEEEECTTSCEEEEEEET-TSCEEEEEESCTT
T ss_pred CCcEEEEecCCcccccccceeeec----------------ccCceEEEEEcCCCCCCcEEEEEcC-CCcEEEEECCCCc
Confidence 67888887432 2 1 1111 1234678999987 445555554 5789999876543
No 206
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.04 E-value=0.24 Score=42.70 Aligned_cols=144 Identities=14% Similarity=0.065 Sum_probs=77.9
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
-..++++| ++.++++-...+.|..++.. ....+ +..+.+ .-.....+++.++|+++++=...+
T Consensus 64 v~~~~~sp-~g~~l~s~s~D~~v~iw~~~-~~~~~~~~~~~~--------------h~~~v~~v~~sp~~~~l~s~s~D~ 127 (345)
T 3fm0_A 64 VRKVAWSP-CGNYLASASFDATTCIWKKN-QDDFECVTTLEG--------------HENEVKSVAWAPSGNLLATCSRDK 127 (345)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEEEC-CC-EEEEEEECC--------------CSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECC-CCCEEEEEECCCcEEEEEcc-CCCeEEEEEccC--------------CCCCceEEEEeCCCCEEEEEECCC
Confidence 46688876 55555555555666666542 11111 222211 112446899999999777766677
Q ss_pred EEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 126 VIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 126 ~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
.|+.++... . ..+.-.. ..-.....++++|+ +.++++-...+.|+.++............
T Consensus 128 ~v~iwd~~~~~~~~~~~~~~-------------~h~~~v~~~~~~p~-~~~l~s~s~d~~i~~w~~~~~~~~~~~~~--- 190 (345)
T 3fm0_A 128 SVWVWEVDEEDEYECVSVLN-------------SHTQDVKHVVWHPS-QELLASASYDDTVKLYREEEDDWVCCATL--- 190 (345)
T ss_dssp CEEEEEECTTSCEEEEEEEC-------------CCCSCEEEEEECSS-SSCEEEEETTSCEEEEEEETTEEEEEEEE---
T ss_pred eEEEEECCCCCCeEEEEEec-------------CcCCCeEEEEECCC-CCEEEEEeCCCcEEEEEecCCCEEEEEEe---
Confidence 888887432 1 1111100 00123468899998 55555545567788888665532211110
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEE
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYII 232 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVa 232 (269)
.+ .-.....++++++|+..++
T Consensus 191 ~~---------h~~~v~~l~~sp~g~~l~s 211 (345)
T 3fm0_A 191 EG---------HESTVWSLAFDPSGQRLAS 211 (345)
T ss_dssp CC---------CSSCEEEEEECTTSSEEEE
T ss_pred cC---------CCCceEEEEECCCCCEEEE
Confidence 00 1133567888888865444
No 207
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.97 E-value=0.43 Score=43.75 Aligned_cols=150 Identities=9% Similarity=-0.059 Sum_probs=86.0
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
..+..++++ +..++++....+.|+.+|+ .++.... .- ....-.....++++++|.++++-...
T Consensus 447 ~~~~~~~~~--~~~l~~~~~~d~~i~~~~~---~~~~~~~-~~-----------~~~~~~~v~~~~~s~~g~~l~~~~~d 509 (615)
T 1pgu_A 447 SPGSAVSLS--QNYVAVGLEEGNTIQVFKL---SDLEVSF-DL-----------KTPLRAKPSYISISPSETYIAAGDVM 509 (615)
T ss_dssp SCEEEEEEC--SSEEEEEETTTSCEEEEET---TEEEEEE-EC-----------SSCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCceEEEEc--CCEEEEeecCCCeEEEEEC---CCccccc-cc-----------cCCccCceEEEEECCCCCEEEEcCCC
Confidence 356778873 4444444432677888874 2333321 10 01122356789999999977776667
Q ss_pred CEEEEEeCCcceEEecCCCCCCCCCCCccccccccCceEEEEeC----------CCCEEEEEECCCCeEEEEECCCC-eE
Q 024317 125 HVIRKITNLGVTTIAGGGSKKEGRADGPAQNASFSNDFELTFVP----------HICALLISDHGNQLIRQINLKPE-DC 193 (269)
Q Consensus 125 ~~I~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~----------~~g~LyVaD~~n~~I~~~~~~~~-~~ 193 (269)
+.|+.++......+..... ..-...+.++++| + +.++++-..++.|+.++.... ..
T Consensus 510 g~i~iw~~~~~~~~~~~~~------------~h~~~v~~~~~sp~~~~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~ 576 (615)
T 1pgu_A 510 GKILLYDLQSREVKTSRWA------------FRTSKINAISWKPAEKGANEEEIE-EDLVATGSLDTNIFIYSVKRPMKI 576 (615)
T ss_dssp SCEEEEETTTTEEEECCSC------------CCSSCEEEEEECCCC------CCS-CCEEEEEETTSCEEEEESSCTTCC
T ss_pred CeEEEeeCCCCcceeEeec------------CCCCceeEEEEcCccccccccccC-CCEEEEEcCCCcEEEEECCCCcee
Confidence 8999999644322111100 0123467899999 7 555555555678999998764 22
Q ss_pred EEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCc
Q 024317 194 SKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRL 238 (269)
Q Consensus 194 ~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~ 238 (269)
...... .-.....+++.++|.|..+..+|.+
T Consensus 577 ~~~~~~--------------h~~~v~~l~~s~~~~l~s~~~d~~v 607 (615)
T 1pgu_A 577 IKALNA--------------HKDGVNNLLWETPSTLVSSGADACI 607 (615)
T ss_dssp EEETTS--------------STTCEEEEEEEETTEEEEEETTSCE
T ss_pred chhhhc--------------CccceEEEEEcCCCCeEEecCCceE
Confidence 211111 1134677888888885445455544
No 208
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.95 E-value=0.36 Score=48.93 Aligned_cols=145 Identities=9% Similarity=0.022 Sum_probs=87.8
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccE-EEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVV-KRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~-~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
.-..+++++ ++.++++-...+.|..+|. .+++. ..+.+. -.....++++++|.+.++=...
T Consensus 617 ~v~~~~~s~-~~~~l~s~~~d~~i~vw~~---~~~~~~~~~~~h--------------~~~v~~~~~s~~~~~l~s~~~d 678 (1249)
T 3sfz_A 617 AVYHACFSQ-DGQRIASCGADKTLQVFKA---ETGEKLLDIKAH--------------EDEVLCCAFSSDDSYIATCSAD 678 (1249)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEET---TTCCEEEEECCC--------------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECC-CCCEEEEEeCCCeEEEEEC---CCCCEEEEeccC--------------CCCEEEEEEecCCCEEEEEeCC
Confidence 456789976 5655566556778888885 34443 333211 1245779999999877776678
Q ss_pred CEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCC-CCEEEEEECCCCeEEEEECCCCeEEEecccC
Q 024317 125 HVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPH-ICALLISDHGNQLIRQINLKPEDCSKSSQSG 200 (269)
Q Consensus 125 ~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~-~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g 200 (269)
+.|+.++.. +. ..+.+. -.....++++++ ++.++++-..++.|+.++.+..........
T Consensus 679 ~~v~vwd~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~- 741 (1249)
T 3sfz_A 679 KKVKIWDSATGKLVHTYDEH----------------SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG- 741 (1249)
T ss_dssp SEEEEEETTTCCEEEEEECC----------------SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC-
T ss_pred CeEEEEECCCCceEEEEcCC----------------CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC-
Confidence 899999964 43 333332 123467888874 245666666678899999876654332211
Q ss_pred ccCCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCc
Q 024317 201 SALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRL 238 (269)
Q Consensus 201 ~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~ 238 (269)
.-.....+++.++|+..++- .+|.+
T Consensus 742 -------------h~~~v~~~~~sp~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 742 -------------HTNSVNHCRFSPDDELLASCSADGTL 767 (1249)
T ss_dssp -------------CSSCEEEEEECSSTTEEEEEESSSEE
T ss_pred -------------CCCCEEEEEEecCCCEEEEEECCCeE
Confidence 11234566777777544433 44433
No 209
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.78 E-value=0.9 Score=39.72 Aligned_cols=127 Identities=14% Similarity=0.169 Sum_probs=72.4
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCccc-----ccCCCCceEEEcCCCCEEEE
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGS-----ARFDKPKSFAVDMKGNIYVA 120 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~-----~~~~~P~giavd~~G~lyVa 120 (269)
.-..++++| +|.++++-. ++.+..++. .+|+.............+..... ..-..-..+++.++|.++++
T Consensus 66 ~V~~v~fsp-dg~~la~g~-~~~v~i~~~---~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 66 VVCCVKFSN-DGEYLATGC-NKTTQVYRV---SDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp CCCEEEECT-TSSEEEEEC-BSCEEEEET---TTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred EEEEEEECC-CCCEEEEEc-CCcEEEEEe---cCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 346789976 566555543 466777764 45554433221100000000000 00012357999999997777
Q ss_pred eCCCCEEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEE
Q 024317 121 DKSNHVIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCS 194 (269)
Q Consensus 121 D~~n~~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~ 194 (269)
-...+.|+.++.... ..+.+. -.....++++++ +..+++-...+.|+.++.......
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h----------------~~~v~~~~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGH----------------EQDIYSLDYFPS-GDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCC----------------SSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEE
T ss_pred EcCCCeEEEEECCCCcEEEEEccC----------------CCCEEEEEEcCC-CCEEEEecCCCcEEEEECCCCeeE
Confidence 777889999996543 233222 123578999998 455555556788999998776543
No 210
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.71 E-value=0.93 Score=39.40 Aligned_cols=113 Identities=10% Similarity=0.058 Sum_probs=63.0
Q ss_pred cceEEEecCCCeEEEEeC-CCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDS-SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~-~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
...++++|++..+.++.. ..+.|+.+|. .+++........ ....+|++.++|.++++-..+
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~---~~~~~~~~~~~~--------------~~V~~v~fspdg~~l~s~s~~- 197 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDP---SDLTEKFEIETR--------------GEVKDLHFSTDGKVVAYITGS- 197 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEET---TTTEEEEEEECS--------------SCCCEEEECTTSSEEEEECSS-
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeEC---CCCcEEEEeCCC--------------CceEEEEEccCCceEEeccce-
Confidence 457899875555666654 3577888885 455544433211 134689999999977766544
Q ss_pred EEEEEe-CCcc-eE-EecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC---eEEEEECCCC
Q 024317 126 VIRKIT-NLGV-TT-IAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ---LIRQINLKPE 191 (269)
Q Consensus 126 ~I~~~~-~~g~-~~-~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~---~I~~~~~~~~ 191 (269)
.+.+++ ..+. .. ...... -.....++++|++..++.+-..+. .++.++....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~--------------~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~ 255 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFDK--------------NWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSG 255 (365)
T ss_dssp CEEEEETTTCCEEEEECCCCT--------------TEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETT
T ss_pred eEEEEEeccCcceeeeecCCC--------------CCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccc
Confidence 455554 4454 21 111100 122468999998434444333222 4666665443
No 211
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.71 E-value=0.47 Score=40.74 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=67.8
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEE--EEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVK--RLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~--~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
-..++++| ++.++++-...+.|+.+|+ ..+... .....+ .-..-..++++++|+++++=...
T Consensus 19 v~~l~~sp-~g~~las~~~D~~i~iw~~---~~~~~~~~~~~~~~------------h~~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 19 CWFLAWNP-AGTLLASCGGDRRIRIWGT---EGDSWICKSVLSEG------------HQRTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp EEEEEECT-TSSCEEEEETTSCEEEEEE---ETTEEEEEEEECSS------------CSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEECC-CCCEEEEEcCCCeEEEEEc---CCCcceeeeeeccc------------cCCcEEEEEECCCCCEEEEEECC
Confidence 45789976 6777777666788888875 233221 111111 11234679999999977766666
Q ss_pred CEEEEEeCCcc-----eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 125 HVIRKITNLGV-----TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 125 ~~I~~~~~~g~-----~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
+.|+.++.+.. ..+.+. -.....++++|+ ++++++-...+.|+.++.+..
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~~h----------------~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLEGH----------------ENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SCEEEEEECCC-EEEEEEECCC----------------SSCEEEEEECTT-SSEEEEEETTSCEEEEEECTT
T ss_pred CcEEEEEccCCCeEEEEEccCC----------------CCCceEEEEeCC-CCEEEEEECCCeEEEEECCCC
Confidence 67777764322 222221 123578999998 555555555678888887643
No 212
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.70 E-value=0.26 Score=41.72 Aligned_cols=107 Identities=10% Similarity=0.054 Sum_probs=64.5
Q ss_pred CCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC---CCCEEEEeCCCCEEEEEeC
Q 024317 56 SSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM---KGNIYVADKSNHVIRKITN 132 (269)
Q Consensus 56 ~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~---~G~lyVaD~~n~~I~~~~~ 132 (269)
++.++++-...+.|..+|+ .+++....... -.....+++++ +++.+++-...+.|+.++.
T Consensus 179 ~~~~l~~~~~d~~i~i~d~---~~~~~~~~~~~--------------~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDL---RNMALRWETNI--------------KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CCCEEEEEETTSEEEEEET---TTTEEEEEEEC--------------SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CCCEEEEEccCCeEEEEEC---ccCceeeecCC--------------CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 5666666666788999985 34444333211 12457789988 7886666666788988884
Q ss_pred Cc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCC
Q 024317 133 LG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKP 190 (269)
Q Consensus 133 ~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~ 190 (269)
.. . ..+.-... ...-.....++++|++..++++-..++.|+.++...
T Consensus 242 ~~~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 242 RTQHPTKGFASVSE-----------KAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEETTTEEEEEEE-----------ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred cCCCcccceeeecc-----------CCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 32 1 22210000 001234578999998333666666678888888654
No 213
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.70 E-value=0.91 Score=39.18 Aligned_cols=111 Identities=14% Similarity=0.135 Sum_probs=67.7
Q ss_pred ceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcC--CCCEEEEeCCC
Q 024317 48 HSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM--KGNIYVADKSN 124 (269)
Q Consensus 48 ~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~--~G~lyVaD~~n 124 (269)
..+++.+ ++..+++-+..+.|..+|+ .+++ +..+.+.. .....+++.+ +|+++++=...
T Consensus 158 ~~~~~~~-~~~~l~t~s~D~~v~lwd~---~~~~~~~~~~~h~--------------~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 158 SACSFTN-SDMQILTASGDGTCALWDV---ESGQLLQSFHGHG--------------ADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp EEEEECS-SSSEEEEEETTSEEEEEET---TTCCEEEEEECCS--------------SCEEEEEECCCSSCCEEEEEETT
T ss_pred EEEEEeC-CCCEEEEEeCCCcEEEEeC---CCCeEEEEEcCCC--------------CCeEEEEEEeCCCCCEEEEEeCC
Confidence 4667754 4555555566788888885 3444 33343221 1224556654 56766666667
Q ss_pred CEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 125 HVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 125 ~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
+.|+.+|.. +. ..+.+. -...+.++++|+ +.++++-...+.|+.++......
T Consensus 220 g~v~~wd~~~~~~~~~~~~h----------------~~~v~~v~~~p~-~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETH----------------ESDVNSVRYYPS-GDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp SCEEEEETTTCCEEEEECCC----------------SSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEE
T ss_pred CeEEEEECCCCcEEEEecCC----------------CCCeEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcE
Confidence 888888853 43 333221 124578999998 55555555678899999877643
No 214
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.66 E-value=0.5 Score=45.57 Aligned_cols=143 Identities=16% Similarity=0.136 Sum_probs=83.2
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
...|.. +.+|+|||+....+-|.++|. .++++..+...+. ..-..+..+..|++|+||++-. +-
T Consensus 474 i~~i~~-d~~g~lWi~~~t~~Gl~~~d~---~~~~~~~~~~~~~----------~~~~~~~~i~~d~~g~lWigt~--~G 537 (758)
T 3ott_A 474 INQIIP-DNEGNVWVLLYNNKGIDKINP---RTREVTKLFADEL----------TGEKSPNYLLCDEDGLLWVGFH--GG 537 (758)
T ss_dssp EEEEEE-CTTSCEEEEETTCSSEEEEET---TTTEEEEECTTTS----------CGGGCEEEEEECTTSCEEEEET--TE
T ss_pred eeeEEE-cCCCCEEEEccCCCCcEEEeC---CCCceEEecCCCc----------CCCcccceEEECCCCCEEEEec--Cc
Confidence 456777 468999994333456888874 4566665521110 0123567899999999999974 46
Q ss_pred EEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccCC
Q 024317 127 IRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSALG 204 (269)
Q Consensus 127 I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g 204 (269)
+.++++... ..+. .. +. .-+...+|..+ +|+||++-. +-|.+|++........... ..
T Consensus 538 l~~~~~~~~~~~~~~-~~--------gl----~~~~i~~i~~~--~g~lWi~t~--~Gl~~~~~~~~~~~~~~~~---~~ 597 (758)
T 3ott_A 538 VMRINPKDESQQSIS-FG--------SF----SNNEILSMTCV--KNSIWVSTT--NGLWIIDRKTMDARQQNMT---NK 597 (758)
T ss_dssp EEEECC--CCCCBCC-CC--------C-------CCEEEEEEE--TTEEEEEES--SCEEEEETTTCCEEEC--C---CC
T ss_pred eEEEecCCCceEEec-cc--------CC----CccceEEEEEC--CCCEEEECC--CCeEEEcCCCceeEEecCC---CC
Confidence 899997543 2221 10 00 01345677643 489999874 4499999887765543211 00
Q ss_pred CcccceeeeeccceeeEEEecCCcEEEEcCCC
Q 024317 205 AVSVWVLVSVLSCLVSLVIGFVARPYIIRHTG 236 (269)
Q Consensus 205 ~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g 236 (269)
.+. ..+..+++|+||+...+|
T Consensus 598 ---------~~~--~~~~~~~~G~l~fG~~~G 618 (758)
T 3ott_A 598 ---------RFT--SLLFDPKEDCVYLGGADG 618 (758)
T ss_dssp ---------CCS--EEEEETTTTEEEEECBSE
T ss_pred ---------cee--eeEEECCCCcEEEecCCc
Confidence 111 223344678888876544
No 215
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.65 E-value=0.46 Score=43.55 Aligned_cols=109 Identities=5% Similarity=-0.028 Sum_probs=68.6
Q ss_pred CCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCc-----cEEEEEcCCcccCCCCCcccccCCC-CceEEEcC--CC
Q 024317 44 EINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEES-----VVKRLAGDGVQGYSDGEPGSARFDK-PKSFAVDM--KG 115 (269)
Q Consensus 44 ~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g-----~~~~~~g~g~~g~~dg~~~~~~~~~-P~giavd~--~G 115 (269)
-..+..++++|++..+.++. .+.|..+|+. ++ ....+.+. -.. ...+++++ +|
T Consensus 18 ~~~v~~~~~spdg~~l~~~~--~~~v~v~~~~---~~~~~~~~~~~~~~h--------------~~~~v~~~~~sp~~~~ 78 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPC--GKSAFVRCLD---DGDSKVPPVVQFTGH--------------GSSVVTTVKFSPIKGS 78 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEE--TTEEEEEECC---SSCCSSCSEEEECTT--------------TTSCEEEEEECSSTTC
T ss_pred cCceeEEEECCCCCEEEEec--CCeEEEEECC---CCCCccccceEEecC--------------CCceEEEEEECcCCCC
Confidence 34678899987555566665 5688888863 33 34444322 123 57899999 99
Q ss_pred CEEEEeCCCCEEEEEeC-Cc--------c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC---C
Q 024317 116 NIYVADKSNHVIRKITN-LG--------V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN---Q 181 (269)
Q Consensus 116 ~lyVaD~~n~~I~~~~~-~g--------~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n---~ 181 (269)
+++++=...+.|+.++. .+ . ..+.+. -.....+++++++..|+++.... +
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~~~~~~~~ 142 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL----------------AGPISDISWDFEGRRLCVVGEGRDNFG 142 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECC----------------SSCEEEEEECTTSSEEEEEECCSSCSE
T ss_pred CEEEEecCCCEEEEEeCCCCcccccccccccchhhcc----------------cccEEEEEEeCCCCEEEEeccCCCCcc
Confidence 96666555788888885 23 2 222211 12457899999866666665432 4
Q ss_pred eEEEEE
Q 024317 182 LIRQIN 187 (269)
Q Consensus 182 ~I~~~~ 187 (269)
.|+.++
T Consensus 143 ~v~~~d 148 (615)
T 1pgu_A 143 VFISWD 148 (615)
T ss_dssp EEEETT
T ss_pred EEEEEE
Confidence 677776
No 216
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.60 E-value=0.82 Score=39.95 Aligned_cols=114 Identities=9% Similarity=0.027 Sum_probs=73.7
Q ss_pred CcceEEEecCCCeEEEEeC--CCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEE--e
Q 024317 46 NPHSVIDRPGSSDLIVLDS--SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVA--D 121 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~--~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVa--D 121 (269)
....+++++.+..++++-. ..+.|..+|+ .+++.......+ .....++++++|..+++ -
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~---~~~~~~~~~~~~--------------~~v~~~~~s~~~~~l~~~~g 323 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNA---ATGARVNTVDAG--------------SQVTSLIWSPHSKEIMSTHG 323 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEET---TTCCEEEEEECS--------------SCEEEEEECSSSSEEEEEEC
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEEC---CCCCEEEEEeCC--------------CcEEEEEECCCCCeEEEEee
Confidence 4578899876778888755 5788999985 345444332211 24578999999996666 4
Q ss_pred CCCCEEEEEeCCc-c--eE--EecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 122 KSNHVIRKITNLG-V--TT--IAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 122 ~~n~~I~~~~~~g-~--~~--~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
..++.|+.++... . .. +.+. -.....++++++ +..+++-..++.|+.++......
T Consensus 324 ~~dg~i~v~~~~~~~~~~~~~~~~h----------------~~~v~~~~~s~d-g~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 324 FPDNNLSIWSYSSSGLTKQVDIPAH----------------DTRVLYSALSPD-GRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp TTTCEEEEEEEETTEEEEEEEEECC----------------SSCCCEEEECTT-SSEEEEECTTSEEEEEECCC---
T ss_pred cCCCcEEEEecCCccceeEEEecCC----------------CCCEEEEEECCC-CCEEEEEeCCCcEEEEECCCCcc
Confidence 4678888888433 2 22 1121 134578999998 55666666678999999876543
No 217
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.57 E-value=0.96 Score=43.53 Aligned_cols=158 Identities=10% Similarity=-0.003 Sum_probs=90.2
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
...|+. +.+|+|||+-. +-+.+++. .++++..+.-... .+ ...-+....|+.|++|+|||+-.. +-
T Consensus 375 v~~i~~-d~~g~lWigt~--~GL~~~~~---~~~~~~~~~~~~~----~~---~~~~~~v~~i~~d~~g~lWigT~~-~G 440 (758)
T 3ott_A 375 IRHIYE-DKEQQLWIATD--GSINRYDY---ATRQFIHYNIVDN----TG---TYNTNWTYYIFEDTAGQLWISTCL-GG 440 (758)
T ss_dssp EEEEEE-CTTSCEEEEET--TEEEEEET---TTTEEEEEEEECC----C-----CBSSSEEEEEECTTSEEEEEESS-SC
T ss_pred eEEEEE-CCCCCEEEEeC--CcHhhcCc---CCCcEEEeecCCC----cC---CCCCceEEEEEEcCCCCEEEEECC-Cc
Confidence 355666 46899999873 47999974 4566655431100 00 001123467899999999998764 34
Q ss_pred EEEEeCCcc-----eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCc
Q 024317 127 IRKITNLGV-----TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGS 201 (269)
Q Consensus 127 I~~~~~~g~-----~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~ 201 (269)
+.++++... ..+.... .+...++. .-.....|..+.+ |+|||+...++-|.++++............
T Consensus 441 l~~~~~~~~~~~~~~~~~~~~--~~~~~~~l----~~~~i~~i~~d~~-g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~- 512 (758)
T 3ott_A 441 IFVVDKHKLMQSTSGQYIAEQ--NYSVHNGL----SGMFINQIIPDNE-GNVWVLLYNNKGIDKINPRTREVTKLFADE- 512 (758)
T ss_dssp EEEEEHHHHHHCCSSEEECSE--EECGGGTC----SCSCEEEEEECTT-SCEEEEETTCSSEEEEETTTTEEEEECTTT-
T ss_pred eEEEccccccccCCcceeccc--cccccccc----ccceeeeEEEcCC-CCEEEEccCCCCcEEEeCCCCceEEecCCC-
Confidence 777775421 1111000 00000000 0123567887876 899993332345999998876655442110
Q ss_pred cCCCcccceeeeeccceeeEEEecCCcEEEEcCCC
Q 024317 202 ALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTG 236 (269)
Q Consensus 202 ~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g 236 (269)
.. .-..+..++.|.+|+||++...|
T Consensus 513 -~~---------~~~~~~~i~~d~~g~lWigt~~G 537 (758)
T 3ott_A 513 -LT---------GEKSPNYLLCDEDGLLWVGFHGG 537 (758)
T ss_dssp -SC---------GGGCEEEEEECTTSCEEEEETTE
T ss_pred -cC---------CCcccceEEECCCCCEEEEecCc
Confidence 00 01346789999999999998654
No 218
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.56 E-value=0.69 Score=38.12 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=60.4
Q ss_pred CCceEEEcC-CCCEEEEeCCCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCe
Q 024317 105 KPKSFAVDM-KGNIYVADKSNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQL 182 (269)
Q Consensus 105 ~P~giavd~-~G~lyVaD~~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~ 182 (269)
....+++.+ +++++++-..++.|+.++.... ..+.... -.....++++++ +.++++ ..++.
T Consensus 144 ~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------------~~~i~~~~~~~~-~~~~~~-~~dg~ 206 (313)
T 3odt_A 144 SVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIH---------------NDVVRHLAVVDD-GHFISC-SNDGL 206 (313)
T ss_dssp CEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSC---------------SSCEEEEEEEET-TEEEEE-ETTSE
T ss_pred ceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccC---------------cccEEEEEEcCC-CeEEEc-cCCCe
Confidence 345666666 7776666666788888884333 3333211 234578998887 665444 45678
Q ss_pred EEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCcc
Q 024317 183 IRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRLD 239 (269)
Q Consensus 183 I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~~ 239 (269)
|+.++............ .-.....+++.++|.++.+..+|.+.
T Consensus 207 i~i~d~~~~~~~~~~~~--------------~~~~i~~~~~~~~~~l~~~~~dg~v~ 249 (313)
T 3odt_A 207 IKLVDMHTGDVLRTYEG--------------HESFVYCIKLLPNGDIVSCGEDRTVR 249 (313)
T ss_dssp EEEEETTTCCEEEEEEC--------------CSSCEEEEEECTTSCEEEEETTSEEE
T ss_pred EEEEECCchhhhhhhhc--------------CCceEEEEEEecCCCEEEEecCCEEE
Confidence 99999875543332211 01234556666666665555555444
No 219
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.54 E-value=0.89 Score=38.01 Aligned_cols=111 Identities=12% Similarity=0.013 Sum_probs=65.4
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC
Q 024317 105 KPKSFAVDMKGNIYVADKSNHVIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ 181 (269)
Q Consensus 105 ~P~giavd~~G~lyVaD~~n~~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~ 181 (269)
....|+++++|+++++=...+.|+.++.... ..+.+. .....++++++ +.++++- .++
T Consensus 217 ~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-----------------~~v~~~~~~~~-~~~~~~~-~d~ 277 (340)
T 4aow_A 217 YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-----------------DIINALCFSPN-RYWLCAA-TGP 277 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-----------------SCEEEEEECSS-SSEEEEE-ETT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-----------------ceEEeeecCCC-Cceeecc-CCC
Confidence 3467899999997777667889999986544 222211 23467787776 5555444 357
Q ss_pred eEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEE-cCCCCcc
Q 024317 182 LIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYII-RHTGRLD 239 (269)
Q Consensus 182 ~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVa-d~~g~~~ 239 (269)
.|+.++.++............... ..........+++.++|+..++ ..+|.++
T Consensus 278 ~i~iwd~~~~~~~~~~~~~~~~~~-----~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 278 SIKIWDLEGKIIVDELKQEVISTS-----SKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp EEEEEETTTTEEEEEECCC------------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEEECCCCeEEEeccccceeee-----ccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 899999887765443221100000 0001234567899999965554 4555544
No 220
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.43 E-value=0.64 Score=39.95 Aligned_cols=87 Identities=10% Similarity=0.030 Sum_probs=44.3
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCC-CCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYS-DGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~-dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
...+++++.+..++++-...+.|..+|+. .....+..+......... ........-.....++++++|+.+++-..++
T Consensus 189 v~~~~~~~~~~~ll~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 267 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASADSRVKLWDVR-RASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN 267 (408)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETT-CSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCcEEEEEcCCCcEEEEECC-CCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCC
Confidence 35677765444455555556667777653 111122222111000000 0000012233457899999998666666678
Q ss_pred EEEEEeCCc
Q 024317 126 VIRKITNLG 134 (269)
Q Consensus 126 ~I~~~~~~g 134 (269)
.|+.++...
T Consensus 268 ~i~vwd~~~ 276 (408)
T 4a11_B 268 RMRLWNSSN 276 (408)
T ss_dssp CEEEEETTT
T ss_pred eEEEEECCC
Confidence 899998543
No 221
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.36 E-value=1.2 Score=38.24 Aligned_cols=113 Identities=8% Similarity=0.069 Sum_probs=68.1
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC---CCCEEEEeC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM---KGNIYVADK 122 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~---~G~lyVaD~ 122 (269)
....+++.+.+++++++-...+.|..+|+ .+++........ .....+++.+ ++.++++-.
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~---~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~ 163 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDT---NTLQTADVFNFE--------------ETVYSHHMSPVSTKHCLVAVGT 163 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEET---TTTEEEEEEECS--------------SCEEEEEECSSCSSCCEEEEEE
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeC---CCCccceeccCC--------------CceeeeEeecCCCCCcEEEEEc
Confidence 34678887656667777667788999985 344443332110 1224455554 344555555
Q ss_pred CCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 123 SNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 123 ~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
.++.|+.++.. +. ..+.+. -.....++++|++..++++-..++.|+.++....
T Consensus 164 ~~~~v~~~d~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 164 RGPKVQLCDLKSGSCSHILQGH----------------RQEILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp SSSSEEEEESSSSCCCEEECCC----------------CSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred CCCeEEEEeCCCcceeeeecCC----------------CCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 66778888754 33 333221 1235789999985556666556788999998654
No 222
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.25 E-value=1.2 Score=37.69 Aligned_cols=119 Identities=13% Similarity=0.208 Sum_probs=77.5
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCC--cc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE--SV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~--g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
.-..+++++.+++++++-+..+.|+.+++..... +. +..+.|. -..-..+++.++|.+.++=.
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h--------------~~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGH--------------SHIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECC--------------SSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCC--------------cccEEEEEECCCCCEEEEEe
Confidence 4577888765667888887888888887521010 11 1222221 12346789999999877777
Q ss_pred CCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEE
Q 024317 123 SNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSK 195 (269)
Q Consensus 123 ~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~ 195 (269)
..+.|+.+|.. +. ..+.+. -.....++++++ +.++++-...+.|+.++..+.....
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~~h----------------~~~v~~~~~~~~-~~~l~s~s~D~~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFVGH----------------KSDVMSVDIDKK-ASMIISGSRDKTIKVWTIKGQCLAT 143 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEECC----------------SSCEEEEEECTT-SCEEEEEETTSCEEEEETTSCEEEE
T ss_pred CCCEEEEEECCCCCeeEEEccC----------------CCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeEEE
Confidence 78899999954 44 444432 123568999987 5666666667889999988765543
No 223
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.25 E-value=1.2 Score=37.56 Aligned_cols=59 Identities=8% Similarity=0.015 Sum_probs=35.4
Q ss_pred CceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEc
Q 024317 160 NDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR 233 (269)
Q Consensus 160 ~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad 233 (269)
....++++|++..|+.+. ..+.|+.++............ .-.....+++.++|...++-
T Consensus 275 ~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~--------------~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVG-SDGRFSFWDKDARTKLKTSEQ--------------LDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp CEEEEEECTTTCCEEEEE-TTSCEEEEETTTTEEEEECCC--------------CSSCEEEEEECTTSSCEEEE
T ss_pred ceEEEEEecCCCEEEEEc-cCCeEEEEECCCCcEEEEecC--------------CCCCceEEEECCCCCeEEEE
Confidence 356788888744444444 456788888776544332211 11346789999999554443
No 224
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.25 E-value=0.69 Score=39.48 Aligned_cols=145 Identities=8% Similarity=-0.002 Sum_probs=82.7
Q ss_pred cceEEEecC-CCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPG-SSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~-~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
...+++++. +++++++-...+.|..+|+ .+++........ .-.....++++++|.++++=..++
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~---~~~~~~~~~~~~------------~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSY---EDDSQYIVHSAK------------SDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEES---SSSCEEEEECCC------------SSCCCCEEEECTTSCEEEEECTTS
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEEC---CCCcEEEEEecC------------CCCceEEEEECCCCCEEEEEcCCC
Confidence 466777541 5666666666778888875 344443332110 011356899999999888866788
Q ss_pred EEEEEeCCc-c-e--EEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCc
Q 024317 126 VIRKITNLG-V-T--TIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGS 201 (269)
Q Consensus 126 ~I~~~~~~g-~-~--~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~ 201 (269)
.|+.+|... . . .+.+ . .-...+.|+++|++..|..+. . +.|+.++.............
T Consensus 193 ~i~iwd~~~~~~~~~~~~~-~--------------h~~~v~~l~fs~~g~~l~s~~-~-~~v~iwd~~~~~~~~~~~~~- 254 (343)
T 3lrv_A 193 ILDVYNLSSPDQASSRFPV-D--------------EEAKIKEVKFADNGYWMVVEC-D-QTVVCFDLRKDVGTLAYPTY- 254 (343)
T ss_dssp CEEEEESSCTTSCCEECCC-C--------------TTSCEEEEEECTTSSEEEEEE-S-SBEEEEETTSSTTCBSSCCC-
T ss_pred EEEEEECCCCCCCccEEec-c--------------CCCCEEEEEEeCCCCEEEEEe-C-CeEEEEEcCCCCcceeeccc-
Confidence 999998543 3 2 2221 0 013457899999855555555 3 38999998764321111100
Q ss_pred cCCCcccceeeeeccceeeEEEecCCcEEEE
Q 024317 202 ALGAVSVWVLVSVLSCLVSLVIGFVARPYII 232 (269)
Q Consensus 202 ~~g~~~~~~~~~~l~~p~gia~d~~g~lyVa 232 (269)
.... . .... ..++++++|+..++
T Consensus 255 ~~~~--~-----~~~~-~~~~~~~~g~~l~~ 277 (343)
T 3lrv_A 255 TIPE--F-----KTGT-VTYDIDDSGKNMIA 277 (343)
T ss_dssp BC------------CC-EEEEECTTSSEEEE
T ss_pred cccc--c-----cccc-eEEEECCCCCEEEE
Confidence 0000 0 0011 45889999977666
No 225
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.24 E-value=1.2 Score=45.00 Aligned_cols=159 Identities=10% Similarity=0.039 Sum_probs=87.9
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
....+++++ ++..+++-+..+.|..+|+ .++......................-.....+++.++|..+++-. ++
T Consensus 745 ~v~~~~~sp-~~~~l~s~s~dg~v~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~ 819 (1249)
T 3sfz_A 745 SVNHCRFSP-DDELLASCSADGTLRLWDV---RSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KN 819 (1249)
T ss_dssp CEEEEEECS-STTEEEEEESSSEEEEEEG---GGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TT
T ss_pred CEEEEEEec-CCCEEEEEECCCeEEEEeC---CCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CC
Confidence 456788875 5666666666788998886 233322221111000000000111122456788888998665554 57
Q ss_pred EEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEecccCcc
Q 024317 126 VIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKSSQSGSA 202 (269)
Q Consensus 126 ~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~~~~g~~ 202 (269)
.+..++.... ..+... .-.....++++++ +.++++-..++.|+.++............
T Consensus 820 ~v~~~d~~~~~~~~~~~~~---------------~~~~v~~~~~sp~-~~~l~~~~~dg~v~vwd~~~~~~~~~~~~--- 880 (1249)
T 3sfz_A 820 KVLLFDIHTSGLLAEIHTG---------------HHSTIQYCDFSPY-DHLAVIALSQYCVELWNIDSRLKVADCRG--- 880 (1249)
T ss_dssp EEEEEETTTCCEEEEEECS---------------SSSCCCEEEECSS-TTEEEEECSSSCEEEEETTTTEEEEEECC---
T ss_pred cEEEEEecCCCceeEEcCC---------------CCCceEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceeeecCC---
Confidence 8888885433 222211 1234578999998 55666666678899999887655432221
Q ss_pred CCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCcc
Q 024317 203 LGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRLD 239 (269)
Q Consensus 203 ~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~~ 239 (269)
.......+++.++|...++- .++.+.
T Consensus 881 -----------h~~~v~~v~~spdg~~l~s~s~dg~v~ 907 (1249)
T 3sfz_A 881 -----------HLSWVHGVMFSPDGSSFLTASDDQTIR 907 (1249)
T ss_dssp -----------CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred -----------CccceEEEEECCCCCEEEEEeCCCeEE
Confidence 11346678888888544443 444443
No 226
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.21 E-value=0.17 Score=42.70 Aligned_cols=110 Identities=10% Similarity=-0.018 Sum_probs=67.2
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc----EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEE
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV----VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVA 120 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~----~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVa 120 (269)
....+++++ ++.++++-...+.|+.+++. .+. .....+. -.....++++++++ ++++
T Consensus 13 ~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~---~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~~l~~ 74 (342)
T 1yfq_A 13 YISDIKIIP-SKSLLLITSWDGSLTVYKFD---IQAKNVDLLQSLRY--------------KHPLLCCNFIDNTDLQIYV 74 (342)
T ss_dssp CEEEEEEEG-GGTEEEEEETTSEEEEEEEE---TTTTEEEEEEEEEC--------------SSCEEEEEEEESSSEEEEE
T ss_pred cEEEEEEcC-CCCEEEEEcCCCeEEEEEeC---CCCccccceeeeec--------------CCceEEEEECCCCCcEEEE
Confidence 457788876 44544444556788888763 222 3333221 12457899998998 5555
Q ss_pred eCCCCEEEEEeC-Ccc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC
Q 024317 121 DKSNHVIRKITN-LGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 121 D~~n~~I~~~~~-~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~ 189 (269)
=...+.|+.++. ... ..+.+.. .-.....|++++ +..|+.+. .++.|+.++..
T Consensus 75 ~~~dg~i~~wd~~~~~~~~~~~~~~--------------~~~~v~~l~~~~-~~~l~s~~-~d~~i~iwd~~ 130 (342)
T 1yfq_A 75 GTVQGEILKVDLIGSPSFQALTNNE--------------ANLGICRICKYG-DDKLIAAS-WDGLIEVIDPR 130 (342)
T ss_dssp EETTSCEEEECSSSSSSEEECBSCC--------------CCSCEEEEEEET-TTEEEEEE-TTSEEEEECHH
T ss_pred EcCCCeEEEEEeccCCceEeccccC--------------CCCceEEEEeCC-CCEEEEEc-CCCeEEEEccc
Confidence 556788999987 554 3332200 012457899998 45555554 46789888765
No 227
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.20 E-value=0.058 Score=46.65 Aligned_cols=86 Identities=7% Similarity=-0.088 Sum_probs=44.0
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeCCcc--eEEecCCCCCCCCCCCcc--ccccccCceEEEEeCCCCEEEEEECCC
Q 024317 105 KPKSFAVDMKGNIYVADKSNHVIRKITNLGV--TTIAGGGSKKEGRADGPA--QNASFSNDFELTFVPHICALLISDHGN 180 (269)
Q Consensus 105 ~P~giavd~~G~lyVaD~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~--~~~~l~~P~gia~~~~~g~LyVaD~~n 180 (269)
....+++++++.++++-...+.|+.++.... ..-......+.....+.. ....-.....++++|+ +.++++-..+
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~~d 226 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPS-GNALAYAGHD 226 (377)
T ss_dssp CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTT-SSCEEEEETT
T ss_pred CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCC-CCEEEEEeCC
Confidence 4578999999987776666778888874210 000000000000000000 0001133578999998 5544444456
Q ss_pred CeEEEEECCCC
Q 024317 181 QLIRQINLKPE 191 (269)
Q Consensus 181 ~~I~~~~~~~~ 191 (269)
+.|+.++....
T Consensus 227 ~~i~iwd~~~~ 237 (377)
T 3dwl_C 227 SSVTIAYPSAP 237 (377)
T ss_dssp TEEC-CEECST
T ss_pred CcEEEEECCCC
Confidence 78988887654
No 228
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.19 E-value=0.17 Score=47.51 Aligned_cols=111 Identities=6% Similarity=0.033 Sum_probs=62.6
Q ss_pred cCCCe-EEEEeCCCCEEEEEecCCCCC-ccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeCC-------
Q 024317 54 PGSSD-LIVLDSSRSAFYTLSFPLSEE-SVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADKS------- 123 (269)
Q Consensus 54 ~~~g~-lyV~D~~~~~I~~~dl~~~~~-g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~~------- 123 (269)
|++.. |+++.....+|+.+++. .+. +....+..... ...-....+++++++|+ |+++...
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~-~~g~~~~~~l~~~~~---------~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~ 157 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPD-APGGAVPRPLTPVSA---------VGGGLRWADPVLLPERGEVWCMAEEFTGEGPS 157 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTT-STTCCCCEECSCCCC---------STTCEEEEEEEEETTTTEEEEEEEEECSSSTT
T ss_pred cCCCeEEEEEECCCCeEEEEcCC-CCCCCCCEeccCCcc---------CCCCccccCcEECCCCCEEEEEEecccCCCCC
Confidence 55667 77776667788888531 001 44443322100 00012346789999998 5554421
Q ss_pred --CCEEEEEeCCc------c--eEEe-cCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-------CCeEEE
Q 024317 124 --NHVIRKITNLG------V--TTIA-GGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG-------NQLIRQ 185 (269)
Q Consensus 124 --n~~I~~~~~~g------~--~~~~-g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~-------n~~I~~ 185 (269)
..+|++++.++ . ..+. .. -.....++++|++..|+++... ...|+.
T Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~l~~~~----------------~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~ 221 (662)
T 3azo_A 158 DVRRFLAAVPLDGSAAADRSAVRELSDDA----------------HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKT 221 (662)
T ss_dssp CEEEEEEEEETTSTTTTCGGGSEESSCSC----------------SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEE
T ss_pred CceeEEEEEECCCCccccCCceeEEEecC----------------CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEE
Confidence 25788888765 3 3332 11 0123457789986677665532 257999
Q ss_pred EECCC
Q 024317 186 INLKP 190 (269)
Q Consensus 186 ~~~~~ 190 (269)
++.++
T Consensus 222 ~d~~~ 226 (662)
T 3azo_A 222 ARVTE 226 (662)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 98873
No 229
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.12 E-value=1.7 Score=38.65 Aligned_cols=126 Identities=10% Similarity=-0.012 Sum_probs=69.9
Q ss_pred CcceEEEecC--CCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 46 NPHSVIDRPG--SSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 46 ~P~giav~~~--~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
....++++|. .+.++++-...+.|+.+|+. ++. +..+.. ..-.....+++. +|.++++-.
T Consensus 197 ~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~---~~~~~~~~~~-------------~h~~~v~~~~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 197 MLTDVHLIKDSDGHQFIITSDRDEHIKISHYP---QCFIVDKWLF-------------GHKHFVSSICCG-KDYLLLSAG 259 (450)
T ss_dssp CEEEEEEEECTTSCEEEEEEETTSCEEEEEES---CTTCEEEECC-------------CCSSCEEEEEEC-STTEEEEEE
T ss_pred ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC---CCceeeeeec-------------CCCCceEEEEEC-CCCEEEEEe
Confidence 3456777763 15555555556677777752 333 222210 112355789998 888777777
Q ss_pred CCCEEEEEeCC-cc--eEEecCCC-CCCCC----CC-C---ccccccccCceEEEEeCCCCEEEEEECCCCeEEEEEC
Q 024317 123 SNHVIRKITNL-GV--TTIAGGGS-KKEGR----AD-G---PAQNASFSNDFELTFVPHICALLISDHGNQLIRQINL 188 (269)
Q Consensus 123 ~n~~I~~~~~~-g~--~~~~g~~~-~~~~~----~~-~---~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~ 188 (269)
..+.|+.++.. +. ..+..... ...-. .+ . ......-....+|++++++..|+++....+.|+.|+.
T Consensus 260 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 260 GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 78899999954 44 33321100 00000 00 0 0000011235789999987788888767788999987
No 230
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.09 E-value=1.8 Score=40.48 Aligned_cols=125 Identities=10% Similarity=0.116 Sum_probs=69.6
Q ss_pred cceEEEecCCCeEEEEeCC-------CCEEEEEecCCCCCc---cEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSS-------RSAFYTLSFPLSEES---VVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN 116 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~-------~~~I~~~dl~~~~~g---~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~ 116 (269)
...++++|++..|+++... ...|+.+|+ +.+| ....+.... -..+..+++.++|.
T Consensus 190 ~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~--~~~g~~~~~~~l~~~~-------------~~~~~~~~~spdg~ 254 (662)
T 3azo_A 190 VTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARV--TEDGRFADTRTLLGGP-------------EEAIAQAEWAPDGS 254 (662)
T ss_dssp ECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEE--CTTSCEEEEEEEEEET-------------TBCEEEEEECTTSC
T ss_pred ccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEE--CCCCcccccEEeCCCC-------------CceEcceEECCCCe
Confidence 3557788766677666533 257898886 3245 454443210 12456788989999
Q ss_pred EEEEeCCCC--EEEEEeCC-cc-eEEecCCCCCCCCCCCccccccc-cCceEEEEeCCCCEEEE-EECCCCeEEEEECCC
Q 024317 117 IYVADKSNH--VIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASF-SNDFELTFVPHICALLI-SDHGNQLIRQINLKP 190 (269)
Q Consensus 117 lyVaD~~n~--~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l-~~P~gia~~~~~g~LyV-aD~~n~~I~~~~~~~ 190 (269)
+|++-...+ +|++++.+ +. ..+... ..... ...+ .....++++++ +.+++ +..+..+|+.++.++
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~-~~~~~-------~p~w~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~d~~~ 325 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRR-EEEFA-------GPLWTPGMRWFAPLAN-GLIAVVHGKGAAVLGILDPES 325 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCC-SSBSS-------CCCCSTTCCSEEECTT-SCEEEEEBSSSCEEEEEETTT
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccc-ccccc-------CccccccCceEeEeCC-CEEEEEEEcCccEEEEEECCC
Confidence 776654444 88999864 44 333221 11100 0001 01346888776 44544 433445678888876
Q ss_pred CeEEE
Q 024317 191 EDCSK 195 (269)
Q Consensus 191 ~~~~~ 195 (269)
+....
T Consensus 326 ~~~~~ 330 (662)
T 3azo_A 326 GELVD 330 (662)
T ss_dssp TEEEE
T ss_pred CcEEE
Confidence 65443
No 231
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.05 E-value=0.18 Score=43.41 Aligned_cols=109 Identities=14% Similarity=0.010 Sum_probs=60.1
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc----EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV----VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~----~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
...+++++ +++++++-...+.|+.+|+. ++. ...+.+ .-.....+++.++++++++-.
T Consensus 58 v~~~~~s~-~~~~l~s~s~d~~v~vwd~~---~~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~ 119 (377)
T 3dwl_C 58 VTCVDWAP-KSNRIVTCSQDRNAYVYEKR---PDGTWKQTLVLLR--------------LNRAATFVRWSPNEDKFAVGS 119 (377)
T ss_dssp EEEEEECT-TTCCEEEEETTSSEEEC---------CCCCEEECCC--------------CSSCEEEEECCTTSSCCEEEE
T ss_pred EEEEEEeC-CCCEEEEEeCCCeEEEEEcC---CCCceeeeeEecc--------------cCCceEEEEECCCCCEEEEEe
Confidence 46788875 45555555556778888652 222 222111 112446788888888555555
Q ss_pred CCCEEEEEeCCcc------eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC
Q 024317 123 SNHVIRKITNLGV------TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 123 ~n~~I~~~~~~g~------~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~ 189 (269)
..+.|+.++.+.. ..+.+. .-.....|+++|+ +.++++-...+.|+.++..
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~~~~~~---------------h~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 120 GARVISVCYFEQENDWWVSKHLKRP---------------LRSTILSLDWHPN-NVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp SSSCEEECCC-----CCCCEEECSS---------------CCSCEEEEEECTT-SSEEEEEESSSCEEEEEEC
T ss_pred cCCeEEEEEECCcccceeeeEeecc---------------cCCCeEEEEEcCC-CCEEEEEeCCCEEEEEEEE
Confidence 5677887775432 222210 0234578999998 5555554456788888865
No 232
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.94 E-value=1 Score=38.72 Aligned_cols=140 Identities=12% Similarity=-0.000 Sum_probs=72.7
Q ss_pred CcceEEEecCCCeEEEEeCCC---CEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEe
Q 024317 46 NPHSVIDRPGSSDLIVLDSSR---SAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~---~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD 121 (269)
....+++++ ++.++++-... +.|..+|+ .+++ +..+.+...+... -......-.....+++++++.++++-
T Consensus 235 ~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 235 SIRSVKFSP-QGSLLAIAHDSNSFGCITLYET---EFGERIGSLSVPTHSSQA-SLGEFAHSSWVMSLSFNDSGETLCSA 309 (397)
T ss_dssp CEEEEEECS-STTEEEEEEEETTEEEEEEEET---TTCCEEEEECBC---------CCBSBSSCEEEEEECSSSSEEEEE
T ss_pred ccceEEECC-CCCEEEEEecCCCCceEEEEEC---CCCcccceeccCcccccc-cccccccCCcEEEEEECCCCCEEEEE
Confidence 457888876 45555554445 78999985 3444 3333221000000 00000012345789999999977777
Q ss_pred CCCCEEEEEeCC-cc--eEEecCCCC-CC--CCCCCccc--cccccCceEEEEeCCCC---------EEEEEECCCCeEE
Q 024317 122 KSNHVIRKITNL-GV--TTIAGGGSK-KE--GRADGPAQ--NASFSNDFELTFVPHIC---------ALLISDHGNQLIR 184 (269)
Q Consensus 122 ~~n~~I~~~~~~-g~--~~~~g~~~~-~~--~~~~~~~~--~~~l~~P~gia~~~~~g---------~LyVaD~~n~~I~ 184 (269)
..++.|+.++.. +. ..+...... .. ....+... ...-...+.+++++++. .++++-..++.|+
T Consensus 310 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 310 GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred eCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEE
Confidence 778899999964 43 333310000 00 00000000 00013467899999831 5666655678898
Q ss_pred EEECCC
Q 024317 185 QINLKP 190 (269)
Q Consensus 185 ~~~~~~ 190 (269)
.|+.++
T Consensus 390 iw~~~~ 395 (397)
T 1sq9_A 390 WFREAG 395 (397)
T ss_dssp EEEEEC
T ss_pred EEEcCC
Confidence 887654
No 233
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.76 E-value=1.9 Score=37.60 Aligned_cols=141 Identities=11% Similarity=0.038 Sum_probs=75.4
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-----EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEe
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-----VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-----~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD 121 (269)
...++++|.+.+++++-...+.|..+|+. +++ +..+.+...+. ..............++++++|.++++-
T Consensus 229 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 229 ITAAEFHPNSCNTFVYSSSKGTIRLCDMR---ASALCDRHSKLFEEPEDPS--NRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETT---TCSSSCTTCEEECCC-------CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred eEEEEECCCCCcEEEEEeCCCeEEEEECc---CCccccceeeEeccCCCcc--ccccccccCceEEEEEECCCCCEEEEe
Confidence 56788876443677776677889999863 222 23332211000 000000111245789999999966665
Q ss_pred CCCCEEEEEeCC--cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEE
Q 024317 122 KSNHVIRKITNL--GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSK 195 (269)
Q Consensus 122 ~~n~~I~~~~~~--g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~ 195 (269)
.. +.|+.++.. +. ..+.+......... .............++++++ +..+++-..++.|+.++........
T Consensus 304 ~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~i~~~~~~~~s~~-~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 304 DY-LSVKVWDLNMENRPVETYQVHEYLRSKLC-SLYENDCIFDKFECCWNGS-DSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp ES-SEEEEEETTCCSSCSCCEESCGGGTTTHH-HHHHTSGGGCCCCEEECTT-SSEEEEECSTTEEEEEETTTCCEEE
T ss_pred eC-CeEEEEeCCCCccccceeecccccccccc-ccccccccccceEEEECCC-CCEEEEeccCCEEEEEEcCCCccee
Confidence 55 899999864 33 34433211000000 0000001112335889998 5555666678899999988765543
No 234
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.75 E-value=1.5 Score=41.51 Aligned_cols=116 Identities=12% Similarity=0.039 Sum_probs=64.8
Q ss_pred cceEEEecCCCeEEEEeC----CCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 47 PHSVIDRPGSSDLIVLDS----SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~----~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
...+++ +++..|+++.. ....|+.+|+ .+|+...+......+ .......+++.++|.++++-.
T Consensus 289 ~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~---~~g~~~~~~~~~~~~---------~~~~~~~~~~spdg~~~~~~~ 355 (741)
T 2ecf_A 289 LARVNW-RDPQHLSFQRQSRDQKKLDLVEVTL---ASNQQRVLAHETSPT---------WVPLHNSLRFLDDGSILWSSE 355 (741)
T ss_dssp EEEEEE-EETTEEEEEEEETTSSEEEEEEEET---TTCCEEEEEEEECSS---------CCCCCSCCEECTTSCEEEEEC
T ss_pred EEEEEe-CCCCEEEEEEecccCCeEEEEEEEC---CCCceEEEEEcCCCC---------cCCcCCceEECCCCeEEEEec
Confidence 356777 76666766543 2456888874 455555443221100 111234678889998666543
Q ss_pred C--CCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEE-EEeCCCCEEEEEECCC----CeEEEEECCCC
Q 024317 123 S--NHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFEL-TFVPHICALLISDHGN----QLIRQINLKPE 191 (269)
Q Consensus 123 ~--n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gi-a~~~~~g~LyVaD~~n----~~I~~~~~~~~ 191 (269)
. ..+|+.++.++. ..+... -.....+ ++++++..||++-... .+|+.++.++.
T Consensus 356 ~~g~~~l~~~~~~~~~~~l~~~----------------~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~ 416 (741)
T 2ecf_A 356 RTGFQHLYRIDSKGKAAALTHG----------------NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG 416 (741)
T ss_dssp TTSSCEEEEECSSSCEEESCCS----------------SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC
T ss_pred CCCccEEEEEcCCCCeeeeeec----------------ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC
Confidence 3 347888886664 222211 0112345 5899866787765543 35777776665
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.65 E-value=1.7 Score=37.55 Aligned_cols=132 Identities=15% Similarity=0.181 Sum_probs=74.2
Q ss_pred CCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCEEEEEeC-Cc
Q 024317 56 SSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHVIRKITN-LG 134 (269)
Q Consensus 56 ~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~I~~~~~-~g 134 (269)
++.+|+... ++.++.+|. .+|++..... +..+.+++++ ++.||+++. ++.+..+|. +|
T Consensus 239 ~~~v~~~~~-~g~l~~~d~---~tG~~~w~~~---------------~~~~~~~~~~-~~~l~~~~~-~g~l~~~d~~tG 297 (376)
T 3q7m_A 239 NGVVFALAY-NGNLTALDL---RSGQIMWKRE---------------LGSVNDFIVD-GNRIYLVDQ-NDRVMALTIDGG 297 (376)
T ss_dssp TTEEEEECT-TSCEEEEET---TTCCEEEEEC---------------CCCEEEEEEE-TTEEEEEET-TCCEEEEETTTC
T ss_pred CCEEEEEec-CcEEEEEEC---CCCcEEeecc---------------CCCCCCceEE-CCEEEEEcC-CCeEEEEECCCC
Confidence 688888764 567888873 4676554321 1234456664 788999986 568999996 45
Q ss_pred ceEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE-EEecccCccCCCcccceeee
Q 024317 135 VTTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC-SKSSQSGSALGAVSVWVLVS 213 (269)
Q Consensus 135 ~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~-~~~~~~g~~~g~~~~~~~~~ 213 (269)
+..+.-..... ..+.. .++. ++.||+.+. ++.|+.++...+.. ......+ +.
T Consensus 298 ~~~w~~~~~~~----------~~~~~---~~~~--~~~l~v~~~-~g~l~~~d~~tG~~~~~~~~~~---~~-------- 350 (376)
T 3q7m_A 298 VTLWTQSDLLH----------RLLTS---PVLY--NGNLVVGDS-EGYLHWINVEDGRFVAQQKVDS---SG-------- 350 (376)
T ss_dssp CEEEEECTTTT----------SCCCC---CEEE--TTEEEEECT-TSEEEEEETTTCCEEEEEECCT---TC--------
T ss_pred cEEEeecccCC----------CcccC---CEEE--CCEEEEEeC-CCeEEEEECCCCcEEEEEecCC---Cc--------
Confidence 53332211000 01222 2333 278999876 46799998665443 2222110 00
Q ss_pred eccceeeEEEecCCcEEEEcCCCCcc
Q 024317 214 VLSCLVSLVIGFVARPYIIRHTGRLD 239 (269)
Q Consensus 214 ~l~~p~gia~d~~g~lyVad~~g~~~ 239 (269)
....| ++ .+++|||...+|.+.
T Consensus 351 ~~~~~---~~-~~~~l~v~~~~G~l~ 372 (376)
T 3q7m_A 351 FQTEP---VA-ADGKLLIQAKDGTVY 372 (376)
T ss_dssp BCSCC---EE-ETTEEEEEBTTSCEE
T ss_pred ceeCC---EE-ECCEEEEEeCCCEEE
Confidence 11112 22 368999998887764
No 236
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.38 E-value=1.7 Score=36.47 Aligned_cols=116 Identities=10% Similarity=0.062 Sum_probs=72.3
Q ss_pred CcceEEEecCC---CeEEEEeCCCCEEEEEecCCCCCccEE-EEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEE
Q 024317 46 NPHSVIDRPGS---SDLIVLDSSRSAFYTLSFPLSEESVVK-RLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVA 120 (269)
Q Consensus 46 ~P~giav~~~~---g~lyV~D~~~~~I~~~dl~~~~~g~~~-~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVa 120 (269)
....+++++.. +.++++-...+.|..+|+ .+++.. .+.+. -.....+++.+ +++++++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~---~~~~~~~~~~~~--------------~~~i~~~~~~~~~~~~l~s 133 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINP---ITMQCIKHYVGH--------------GNAINELKFHPRDPNLLLS 133 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECT---TTCCEEEEEESC--------------CSCEEEEEECSSCTTEEEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEc---hhceEeeeecCC--------------CCcEEEEEECCCCCCEEEE
Confidence 35678887642 566666667789999975 344433 33221 12457799988 8887777
Q ss_pred eCCCCEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 121 DKSNHVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 121 D~~n~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
=...+.|+.++.. +. ........ ..-.....+++++++..|+.+ ..++.|+.++....
T Consensus 134 ~~~dg~i~iwd~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 134 VSKDHALRLWNIQTDTLVAIFGGVE------------GHRDEVLSADYDLLGEKIMSC-GMDHSLKLWRINSK 193 (366)
T ss_dssp EETTSCEEEEETTTTEEEEEECSTT------------SCSSCEEEEEECTTSSEEEEE-ETTSCEEEEESCSH
T ss_pred EeCCCeEEEEEeecCeEEEEecccc------------cccCceeEEEECCCCCEEEEe-cCCCCEEEEECCCC
Confidence 6667889999864 33 22221100 012346789999984445444 44678999998754
No 237
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.29 E-value=2.4 Score=36.68 Aligned_cols=107 Identities=10% Similarity=0.113 Sum_probs=65.5
Q ss_pred CCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCEEEEEeCC-c
Q 024317 56 SSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHVIRKITNL-G 134 (269)
Q Consensus 56 ~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~I~~~~~~-g 134 (269)
+++++++-...+.|..+|+ ..++..... ...-.....++++++++++++=...+.|+.++.. +
T Consensus 108 ~~~~l~~~~~dg~i~iwd~---~~~~~~~~~-------------~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 171 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDS---NFNLQREID-------------QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG 171 (420)
T ss_dssp SSCEEEEEETTSCEEEECT---TSCEEEEET-------------TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCCEEEEEECCCCEEEEeC---CCcceeeec-------------ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 4555555455566777753 233333321 1122345789999999877766668899999954 4
Q ss_pred c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEE
Q 024317 135 V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSK 195 (269)
Q Consensus 135 ~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~ 195 (269)
. ..+.+. -.....+++++++..|+ +-...+.|+.++........
T Consensus 172 ~~~~~~~~h----------------~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 172 SNPRTLIGH----------------RATVTDIAIIDRGRNVL-SASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp CCCEEEECC----------------SSCEEEEEEETTTTEEE-EEETTSCEEEEETTTTEEEE
T ss_pred cCceEEcCC----------------CCcEEEEEEcCCCCEEE-EEcCCCcEEEeECCCCceeE
Confidence 3 444332 13457899999844454 44456789999987665443
No 238
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.17 E-value=2.3 Score=36.11 Aligned_cols=111 Identities=10% Similarity=-0.018 Sum_probs=62.3
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCC----------C
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG----------N 116 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G----------~ 116 (269)
...++++| ++..+++-...+.|+.+|+. +......... ...-.....+++.+++ .
T Consensus 121 v~~v~~sp-~~~~l~s~~~d~~i~~wd~~----~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 2xzm_R 121 VYSVAFSP-DNRQILSAGAEREIKLWNIL----GECKFSSAEK----------ENHSDWVSCVRYSPIMKSANKVQPFAP 185 (343)
T ss_dssp EEEEEECS-STTEEEEEETTSCEEEEESS----SCEEEECCTT----------TSCSSCEEEEEECCCCCSCSCCCSSCC
T ss_pred EEEEEECC-CCCEEEEEcCCCEEEEEecc----CCceeeeecc----------cCCCceeeeeeeccccccccccCCCCC
Confidence 46678865 45444554456777777642 2211111000 0011122445555544 5
Q ss_pred EEEEeCCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC
Q 024317 117 IYVADKSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 117 lyVaD~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~ 189 (269)
++++-...+.|+.++..+. ..+.+. -.....++++|+ +..+++-...+.|+.++..
T Consensus 186 ~l~s~~~d~~i~iwd~~~~~~~~~~~h----------------~~~v~~~~~s~~-g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 186 YFASVGWDGRLKVWNTNFQIRYTFKAH----------------ESNVNHLSISPN-GKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp EEEEEETTSEEEEEETTTEEEEEEECC----------------SSCEEEEEECTT-SSEEEEEETTCEEEEEESS
T ss_pred EEEEEcCCCEEEEEcCCCceeEEEcCc----------------cccceEEEECCC-CCEEEEEcCCCeEEEEECC
Confidence 6666666788998886655 333222 123578999998 5555555567889999873
No 239
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.04 E-value=0.42 Score=41.23 Aligned_cols=79 Identities=11% Similarity=0.013 Sum_probs=42.9
Q ss_pred eEEEcCCCC-E-EEEeCCCC---EEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEE---
Q 024317 108 SFAVDMKGN-I-YVADKSNH---VIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISD--- 177 (269)
Q Consensus 108 giavd~~G~-l-yVaD~~n~---~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD--- 177 (269)
..++.++|. | |+++.... .|++++.++. ..+...... ......|.+++++|++..|+++-
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~----------~~~~~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPAC----------SHLMSNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCE----------EEEEECTTSSEEEEEECCC-------
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCc----------eeeeecCCCCeEccCCCcceeEeeec
Confidence 467888987 5 55554222 4889986543 333221100 00112255567788755666542
Q ss_pred -----CCCCeEEEEECCCCeEEEe
Q 024317 178 -----HGNQLIRQINLKPEDCSKS 196 (269)
Q Consensus 178 -----~~n~~I~~~~~~~~~~~~~ 196 (269)
.++..|++++.+++.....
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l 335 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKNGTQHRV 335 (388)
T ss_dssp -----CCCCEEEEEETTTTEEEEE
T ss_pred cccccCCCCEEEEEeccCCceEEe
Confidence 4566899999887765443
No 240
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.98 E-value=1.3 Score=37.43 Aligned_cols=117 Identities=12% Similarity=0.048 Sum_probs=64.2
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCC--CCEEEEeCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK--GNIYVADKS 123 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~--G~lyVaD~~ 123 (269)
.-..+++++ ++.++++-...+.|..+++. ..+++....... .-.....+++.++ ++++++=..
T Consensus 13 ~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 13 LIHDAVLDY-YGKRLATCSSDKTIKIFEVE-GETHKLIDTLTG-------------HEGPVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp CEEEEEECS-SSSEEEEEETTSCEEEEEEE-TTEEEEEEEECC-------------CSSCEEEEEECCGGGCSEEEEEET
T ss_pred cEEEEEEcC-CCCEEEEEECCCcEEEEecC-CCcceeeeEecC-------------CCCcEEEEEeCCCCCCCEEEEecc
Confidence 457788875 55555555556778888752 123332222110 1123356777655 776665555
Q ss_pred CCEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCC--CCEEEEEECCCCeEEEEECCCC
Q 024317 124 NHVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPH--ICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 124 n~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~--~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
++.|+.++.. +. ..+.-... .-.....++++++ +..|+++. .++.|+.++....
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAV-------------HSASVNSVQWAPHEYGPLLLVAS-SDGKVSVVEFKEN 135 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECC-------------CSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEECCTT
T ss_pred CCEEEEEEcCCCceeEeeeecC-------------CCcceEEEEeCCCCCCCEEEEec-CCCcEEEEecCCC
Confidence 6777777743 22 12211100 0134578888886 44455554 4678988887664
No 241
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.88 E-value=1.5 Score=36.81 Aligned_cols=119 Identities=6% Similarity=0.014 Sum_probs=60.8
Q ss_pred cceEEEecCC--CeEEEEeCCCCEEEEEecCCCCCc-cEEEEEcCCcccCCCCCcccccCCCCceE------EEcCCCCE
Q 024317 47 PHSVIDRPGS--SDLIVLDSSRSAFYTLSFPLSEES-VVKRLAGDGVQGYSDGEPGSARFDKPKSF------AVDMKGNI 117 (269)
Q Consensus 47 P~giav~~~~--g~lyV~D~~~~~I~~~dl~~~~~g-~~~~~~g~g~~g~~dg~~~~~~~~~P~gi------avd~~G~l 117 (269)
...+++.+.. +.++++-...+.|..+|+. ... .+..+.+. -.....+ ++++++++
T Consensus 68 v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~s~~~~~ 131 (357)
T 3i2n_A 68 IKCGTFGATSLQQRYLATGDFGGNLHIWNLE--APEMPVYSVKGH--------------KEIINAIDGIGGLGIGEGAPE 131 (357)
T ss_dssp EEEEECTTCCTTTCCEEEEETTSCEEEECTT--SCSSCSEEECCC--------------SSCEEEEEEESGGGCC-CCCE
T ss_pred EEEEEEcCCCCCCceEEEecCCCeEEEEeCC--CCCccEEEEEec--------------ccceEEEeeccccccCCCccE
Confidence 3567776542 4555555556777777652 111 23333211 0112233 44677876
Q ss_pred EEEeCCCCEEEEEeCCcc----eEEecCCCCCCCCCCCccccccccCceEEE----EeCCCCEEEEEECCCCeEEEEECC
Q 024317 118 YVADKSNHVIRKITNLGV----TTIAGGGSKKEGRADGPAQNASFSNDFELT----FVPHICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 118 yVaD~~n~~I~~~~~~g~----~~~~g~~~~~~~~~~~~~~~~~l~~P~gia----~~~~~g~LyVaD~~n~~I~~~~~~ 189 (269)
+++-...+.|+.++.... ..+....... -.....++ ++++ +.++++-..++.|+.++..
T Consensus 132 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~-~~~l~~~~~d~~i~i~d~~ 198 (357)
T 3i2n_A 132 IVTGSRDGTVKVWDPRQKDDPVANMEPVQGEN------------KRDCWTVAFGNAYNQE-ERVVCAGYDNGDIKLFDLR 198 (357)
T ss_dssp EEEEETTSCEEEECTTSCSSCSEEECCCTTSC------------CCCEEEEEEECCCC-C-CCEEEEEETTSEEEEEETT
T ss_pred EEEEeCCCeEEEEeCCCCCCcceeccccCCCC------------CCceEEEEEEeccCCC-CCEEEEEccCCeEEEEECc
Confidence 666666778888885431 3332211000 11234455 5566 5555555556789999988
Q ss_pred CCeEE
Q 024317 190 PEDCS 194 (269)
Q Consensus 190 ~~~~~ 194 (269)
.....
T Consensus 199 ~~~~~ 203 (357)
T 3i2n_A 199 NMALR 203 (357)
T ss_dssp TTEEE
T ss_pred cCcee
Confidence 76653
No 242
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=93.88 E-value=1.7 Score=43.50 Aligned_cols=100 Identities=13% Similarity=0.031 Sum_probs=60.1
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC---
Q 024317 105 KPKSFAVDMKGNIYVADKSNHVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG--- 179 (269)
Q Consensus 105 ~P~giavd~~G~lyVaD~~n~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~--- 179 (269)
.+..++++++|..++.-...+.|+.++.. |. ..+.... -.....++++|++..|.++...
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~---------------~~~v~~~~~SpDG~~la~~~~~~~~ 444 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR---------------EAMITDFTISDNSRFIAYGFPLKHG 444 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS---------------SSCCCCEEECTTSCEEEEEEEECSS
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC---------------CCCccceEECCCCCeEEEEecCccc
Confidence 45789999999844333345689999964 44 4333110 1123578899985566555432
Q ss_pred ------CCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCc-EEEEcC
Q 024317 180 ------NQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVAR-PYIIRH 234 (269)
Q Consensus 180 ------n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~-lyVad~ 234 (269)
.+.|+.++..+......... ......++++++|+ ||++..
T Consensus 445 ~~~~~~~~~i~l~d~~~g~~~~l~~~---------------~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRKIFAATTE---------------NSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTEEEECSCS---------------SSBEEEEEECTTSCEEEEEES
T ss_pred cccCCCCCeEEEEECCCCcEEEeeCC---------------CcccCCceEcCCCCEEEEEec
Confidence 25799999887654332211 12245578888884 665554
No 243
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.76 E-value=0.99 Score=43.50 Aligned_cols=66 Identities=8% Similarity=0.062 Sum_probs=38.1
Q ss_pred CCCEEEEeCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCC--CEEEEEECCCCeEEEEEC
Q 024317 114 KGNIYVADKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHI--CALLISDHGNQLIRQINL 188 (269)
Q Consensus 114 ~G~lyVaD~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~--g~LyVaD~~n~~I~~~~~ 188 (269)
++.++++-..++.|+.++.. +. ......-. ..-....+++++|+. +.++++-...+.|+.++.
T Consensus 169 d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~------------~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 169 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE------------GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp GGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC------------CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred CCCEEEEEECCCeEEEEeccCCcccceeeeeec------------CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 46766666667778888742 21 11111000 001245789999873 556655556778999987
Q ss_pred CCC
Q 024317 189 KPE 191 (269)
Q Consensus 189 ~~~ 191 (269)
...
T Consensus 237 ~~~ 239 (753)
T 3jro_A 237 DNE 239 (753)
T ss_dssp SSS
T ss_pred CCC
Confidence 654
No 244
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.71 E-value=2.6 Score=35.10 Aligned_cols=126 Identities=13% Similarity=0.037 Sum_probs=69.8
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcC-CCCEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM-KGNIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~-~G~lyVaD~~n 124 (269)
.+..+++++ +.++++ ...+.|..+|+............. ..-..+..+++.+ +++++++-...
T Consensus 152 ~v~~~~~~~--~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~-------------~~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 152 KIFTMDTNS--SRLIVG-MNNSQVQWFRLPLCEDDNGTIEES-------------GLKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp CEEEEEECS--SEEEEE-ESTTEEEEEESSCCTTCCCEEEEC-------------SCSSCEEEEEECSGGGCEEEEEETT
T ss_pred ceEEEEecC--CcEEEE-eCCCeEEEEECCccccccceeeec-------------CCCCceeEEEECCCCCCEEEEEecC
Confidence 456778853 335554 456788888863101111111111 0112457899998 88877777667
Q ss_pred CEEEEEe--CC-----cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEE
Q 024317 125 HVIRKIT--NL-----GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSK 195 (269)
Q Consensus 125 ~~I~~~~--~~-----g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~ 195 (269)
+.|+.++ .. .. ..+.+...... + .........+++++++..|+.+. .++.|+.++........
T Consensus 216 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~ 287 (342)
T 1yfq_A 216 GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK----D---TNLAYPVNSIEFSPRHKFLYTAG-SDGIISCWNLQTRKKIK 287 (342)
T ss_dssp SEEEEEECCTTCCSTTCTTCEEEECCCCCTT----C---CSSCCCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTEEEE
T ss_pred CcEEEEEEcCCCcccccccceeeeccccccc----c---cccceeEEEEEEcCCCCEEEEec-CCceEEEEcCccHhHhh
Confidence 8888755 33 13 34433211000 0 01123567899999844455444 56789999988665443
No 245
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=93.57 E-value=3.4 Score=35.96 Aligned_cols=138 Identities=10% Similarity=0.016 Sum_probs=68.3
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCC------Ccc---EEEEEcCCc-ccCCCCCcccccCCCCceEEEcCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSE------ESV---VKRLAGDGV-QGYSDGEPGSARFDKPKSFAVDMKG 115 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~------~g~---~~~~~g~g~-~g~~dg~~~~~~~~~P~giavd~~G 115 (269)
.-..+++++ ++.++++-...+.|..+++.... .+. ...+.+... ..+.. ....-.....+++.+++
T Consensus 30 ~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~---~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 30 IISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLK---SLEIEEKINKIRWLPQK 105 (447)
T ss_dssp SEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGG---TEEECCCCCEEEECCCC
T ss_pred cEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccc---cccccCceEEEEEcCCC
Confidence 346788975 66666666667889988863110 011 222322110 00000 00000235678998887
Q ss_pred --CEEEEeCCCCEEEEEeCCcc-eEEecCCCCC-CC------CCCC-------------------ccccccccCceEEEE
Q 024317 116 --NIYVADKSNHVIRKITNLGV-TTIAGGGSKK-EG------RADG-------------------PAQNASFSNDFELTF 166 (269)
Q Consensus 116 --~lyVaD~~n~~I~~~~~~g~-~~~~g~~~~~-~~------~~~~-------------------~~~~~~l~~P~gia~ 166 (269)
..+++-...+.|+.++.... .......... .+ .... ......-.....+++
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 55555566778887774332 1111000000 00 0000 000011234578999
Q ss_pred eCCCCEEEEEECCCCeEEEEECC
Q 024317 167 VPHICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 167 ~~~~g~LyVaD~~n~~I~~~~~~ 189 (269)
+++ +.++++- ..+.|+.++.+
T Consensus 186 ~~~-~~~l~s~-~d~~i~iwd~~ 206 (447)
T 3dw8_B 186 NSD-YETYLSA-DDLRINLWHLE 206 (447)
T ss_dssp CTT-SSEEEEE-CSSEEEEEETT
T ss_pred cCC-CCEEEEe-CCCeEEEEECC
Confidence 998 5555554 58899999988
No 246
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.31 E-value=2.9 Score=34.40 Aligned_cols=128 Identities=11% Similarity=-0.012 Sum_probs=65.4
Q ss_pred CcceEEEecCC-CeEEEEeCCCCEEEEEecCCCCC-ccEEEEEcCCcccCCCCCcccccCCCCceEEEcCC---CCEEEE
Q 024317 46 NPHSVIDRPGS-SDLIVLDSSRSAFYTLSFPLSEE-SVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK---GNIYVA 120 (269)
Q Consensus 46 ~P~giav~~~~-g~lyV~D~~~~~I~~~dl~~~~~-g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~---G~lyVa 120 (269)
....+++.+.. +.++++-...+.|+.+|+..... ..+........... ...........+++.++ +.++++
T Consensus 112 ~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~p~~~~~~~l~~ 187 (351)
T 3f3f_A 112 SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI----PPANHLQSDFCLSWCPSRFSPEKLAV 187 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC----CCSSCSCCCEEEEECCCSSSCCEEEE
T ss_pred ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc----ccCCcccceeEEEeccCCCCCcEEEE
Confidence 35678886531 66666666678899998631111 11110000000000 01123345567888775 665555
Q ss_pred eCCCCEEEEEeC-Ccc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCC---EEEEEECCCCeEEEEECCC
Q 024317 121 DKSNHVIRKITN-LGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHIC---ALLISDHGNQLIRQINLKP 190 (269)
Q Consensus 121 D~~n~~I~~~~~-~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g---~LyVaD~~n~~I~~~~~~~ 190 (269)
-..++.+...+. .+. ..+.-.. ..-...++++++|+++ .++++-...+.|+.++...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 188 SALEQAIIYQRGKDGKLHVAAKLP-------------GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EETTEEEEEEECTTSCEEEEEECC-------------CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred ecCCCcEEEEccCCCceeeeeecC-------------CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 555555544443 333 2222110 0012357899999731 6666666677888888765
No 247
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=93.06 E-value=4.2 Score=35.49 Aligned_cols=143 Identities=7% Similarity=0.013 Sum_probs=75.9
Q ss_pred CCCcEEEEEecCccCCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc----EEEEEcCCcccCCCCCcccccCC
Q 024317 29 EDGYTVTTVIDGHQLEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV----VKRLAGDGVQGYSDGEPGSARFD 104 (269)
Q Consensus 29 ~~g~~~~~~~~g~~~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~----~~~~~g~g~~g~~dg~~~~~~~~ 104 (269)
++|..+..+..+. -..-..+++++.++.++++-...+.|..+|+.....+. ...+ ..-.
T Consensus 50 ~~g~~~~~~~~~h--~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~---------------~h~~ 112 (437)
T 3gre_A 50 LRGKLIATLMENE--PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY---------------DCSS 112 (437)
T ss_dssp CCCCEEEEECTTT--TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE---------------ECSS
T ss_pred ccceEEeeeccCC--CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec---------------cCCC
Confidence 3455566553321 23568899975367777777778889988752100011 1111 1122
Q ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEeC----Ccc--eEEecCCCCCCCCCCCccccccccCceEEE--EeCCCCEEEEE
Q 024317 105 KPKSFAVDMKGNIYVADKSNHVIRKITN----LGV--TTIAGGGSKKEGRADGPAQNASFSNDFELT--FVPHICALLIS 176 (269)
Q Consensus 105 ~P~giavd~~G~lyVaD~~n~~I~~~~~----~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia--~~~~~g~LyVa 176 (269)
....|++.++++++++=...+.|+.++. .+. ....+.........+ ...-.....++ ..++ +.++++
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~-~~~l~~ 187 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKN----FGKNEYAVRMRAFVNEE-KSLLVA 187 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGG----GSSCCCEEEEEEEECSS-CEEEEE
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccC----cccccCceEEEEEEcCC-CCEEEE
Confidence 4578999998887766666788888764 333 211111000000000 00011233444 3455 566666
Q ss_pred ECCCCeEEEEECCCCeE
Q 024317 177 DHGNQLIRQINLKPEDC 193 (269)
Q Consensus 177 D~~n~~I~~~~~~~~~~ 193 (269)
-..++.|+.++......
T Consensus 188 ~~~d~~i~iwd~~~~~~ 204 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLER 204 (437)
T ss_dssp EETTSEEEEEETTTCCE
T ss_pred EeCCCeEEEEeCCCCee
Confidence 66678899999876544
No 248
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=92.97 E-value=1.3 Score=39.69 Aligned_cols=123 Identities=8% Similarity=-0.115 Sum_probs=71.5
Q ss_pred CcceEEEecCCCeEEE---EeCCCCEEEEEecCCCCCc-----c-EEEEEcCCcccCCCCCcccccCCCCceEEEcCC-C
Q 024317 46 NPHSVIDRPGSSDLIV---LDSSRSAFYTLSFPLSEES-----V-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK-G 115 (269)
Q Consensus 46 ~P~giav~~~~g~lyV---~D~~~~~I~~~dl~~~~~g-----~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~-G 115 (269)
....+++++.+..|+| +-...+.|+.+|+.....+ + +..+.- ....-....+++++++ +
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-----------~~~h~~~V~~v~~~p~~~ 162 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKL-----------LKDAGGMVIDMKWNPTVP 162 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEEC-----------CCSGGGSEEEEEECSSCT
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeec-----------cCCCCCceEEEEECCCCC
Confidence 3678899865555665 5555678888875210000 0 000000 0001224578999886 7
Q ss_pred CEEEEeCCCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEE
Q 024317 116 NIYVADKSNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCS 194 (269)
Q Consensus 116 ~lyVaD~~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~ 194 (269)
+++++=...+.|+.+|.... ....-.+ .-..+.++++++++..|+++. .++.|+.++.++....
T Consensus 163 ~~las~s~Dg~v~iwD~~~~~~~~~~~~--------------~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~ 227 (434)
T 2oit_A 163 SMVAVCLADGSIAVLQVTETVKVCATLP--------------STVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKK 227 (434)
T ss_dssp TEEEEEETTSCEEEEEESSSEEEEEEEC--------------GGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEE
T ss_pred CEEEEEECCCeEEEEEcCCCcceeeccC--------------CCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccc
Confidence 77776666788888885433 2211110 013468999999855666665 5678999998855443
No 249
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=92.64 E-value=3.7 Score=36.19 Aligned_cols=103 Identities=14% Similarity=0.059 Sum_probs=61.8
Q ss_pred CeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCEEEEEeC-Ccc
Q 024317 57 SDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHVIRKITN-LGV 135 (269)
Q Consensus 57 g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~I~~~~~-~g~ 135 (269)
++++++-...+.|..+|+ .+++....... .-.....++++++++.+++-...+.|+.++. .+.
T Consensus 280 ~~~l~~~~~d~~i~vwd~---~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 280 GNIVVSGSYDNTLIVWDV---AQMKCLYILSG-------------HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp TTEEEEEETTSCEEEEET---TTTEEEEEECC-------------CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEeCCCeEEEEEC---CCCcEEEEecC-------------CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 444445455677888875 34443332211 1224567999999987777777889999996 454
Q ss_pred --eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEE
Q 024317 136 --TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCS 194 (269)
Q Consensus 136 --~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~ 194 (269)
..+.+. -.....+++++ ..|+.+. ..+.|+.++.......
T Consensus 344 ~~~~~~~h----------------~~~v~~~~~~~--~~l~s~s-~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 344 LMYTLQGH----------------TALVGLLRLSD--KFLVSAA-ADGSIRGWDANDYSRK 385 (464)
T ss_dssp EEEEECCC----------------SSCEEEEEECS--SEEEEEE-TTSEEEEEETTTCCEE
T ss_pred EEEEEeCC----------------CCcEEEEEEcC--CEEEEEe-CCCcEEEEECCCCcee
Confidence 333222 12345677653 3454444 4678999998765443
No 250
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.64 E-value=3.8 Score=33.97 Aligned_cols=77 Identities=12% Similarity=0.104 Sum_probs=50.4
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCC--ccEE-EEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEe
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEE--SVVK-RLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVAD 121 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~--g~~~-~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD 121 (269)
..-..|+++|.+++++++-+..+.|..+|+..... +... .+.+ .-.....+++.++|+++++-
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~--------------h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG--------------HSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC--------------CSSCEEEEEECTTSSEEEEE
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC--------------CCCCEEEEEECCCCCEEEEE
Confidence 34688999876678888877778888888642111 1111 1111 12345779999999977776
Q ss_pred CCCCEEEEEeCCcc
Q 024317 122 KSNHVIRKITNLGV 135 (269)
Q Consensus 122 ~~n~~I~~~~~~g~ 135 (269)
...+.|+.++....
T Consensus 105 ~~d~~i~~~~~~~~ 118 (340)
T 4aow_A 105 SWDGTLRLWDLTTG 118 (340)
T ss_dssp ETTSEEEEEETTTT
T ss_pred cccccceEEeeccc
Confidence 66788888886554
No 251
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=92.63 E-value=7 Score=38.58 Aligned_cols=125 Identities=11% Similarity=-0.001 Sum_probs=71.2
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
-..|++++ +.+.++-...+.|..+|+ .+++....... -.....++++++++..++=..++.
T Consensus 61 V~~l~fsp--g~~L~S~s~D~~v~lWd~---~~~~~~~~~~~--------------~~~V~~v~~sp~g~~l~sgs~dg~ 121 (902)
T 2oaj_A 61 IKEMRFVK--GIYLVVINAKDTVYVLSL---YSQKVLTTVFV--------------PGKITSIDTDASLDWMLIGLQNGS 121 (902)
T ss_dssp EEEEEEET--TTEEEEEETTCEEEEEET---TTCSEEEEEEC--------------SSCEEEEECCTTCSEEEEEETTSC
T ss_pred EEEEEEcC--CCEEEEEECcCeEEEEEC---CCCcEEEEEcC--------------CCCEEEEEECCCCCEEEEEcCCCc
Confidence 36788875 555555556788999986 24443322211 013467889899985555555788
Q ss_pred EEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEE
Q 024317 127 IRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSK 195 (269)
Q Consensus 127 I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~ 195 (269)
|+.+|.... ..+.-........ ...+.......|+++|+++.++++-..++.| .++........
T Consensus 122 V~lwd~~~~~~~~~~i~~~~~~~~----~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~ 187 (902)
T 2oaj_A 122 MIVYDIDRDQLSSFKLDNLQKSSF----FPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQ 187 (902)
T ss_dssp EEEEETTTTEEEEEEECCHHHHHT----CSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEE
T ss_pred EEEEECCCCccccceecccccccc----ccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEE
Confidence 999986554 2111100000000 0001123467899999644566666667888 99988765443
No 252
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.07 E-value=5 Score=38.49 Aligned_cols=115 Identities=8% Similarity=0.014 Sum_probs=65.6
Q ss_pred cceEEEecCC-CeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCC--CCEEEEeCC
Q 024317 47 PHSVIDRPGS-SDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK--GNIYVADKS 123 (269)
Q Consensus 47 P~giav~~~~-g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~--G~lyVaD~~ 123 (269)
-.++++++.. ++++++-...+.|+.+|+. +++....... ...-.....+++.++ |+++++=..
T Consensus 56 V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~---~~~~~~~~~~-----------~~h~~~V~~v~~sp~~~~~~l~sgs~ 121 (753)
T 3jro_A 56 VWRVDWAHPKFGTILASCSYDGKVLIWKEE---NGRWSQIAVH-----------AVHSASVNSVQWAPHEYGPLLLVASS 121 (753)
T ss_dssp EEEEEECCTTSCSEEEEEETTSCEEEEEEE---TTEEEEEEEE-----------CCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred eEEEEecCCCCCCEEEEEeCCCeEEEEECC---CCcccccccc-----------cCCCCCeEEEEECCCCCCCEEEEEeC
Confidence 4677875431 6666666667788888752 3432111100 001224567889888 887776667
Q ss_pred CCEEEEEeCCcc-----eEEecCCCCCCCCCCCccccccccCceEEEEeCC------------CCEEEEEECCCCeEEEE
Q 024317 124 NHVIRKITNLGV-----TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPH------------ICALLISDHGNQLIRQI 186 (269)
Q Consensus 124 n~~I~~~~~~g~-----~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~------------~g~LyVaD~~n~~I~~~ 186 (269)
++.|+.++.... ..+.+. -.....++++|. ++.++++-..++.|+.+
T Consensus 122 dg~I~vwdl~~~~~~~~~~~~~~----------------~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iw 185 (753)
T 3jro_A 122 DGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 185 (753)
T ss_dssp TSEEEEEECCSSSCCCCEEEECC----------------SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEE
T ss_pred CCcEEEEEeecCCCcceeEeecC----------------CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEE
Confidence 889999885332 222221 123456777763 24555555556778888
Q ss_pred ECCCC
Q 024317 187 NLKPE 191 (269)
Q Consensus 187 ~~~~~ 191 (269)
+....
T Consensus 186 d~~~~ 190 (753)
T 3jro_A 186 KYNSD 190 (753)
T ss_dssp EEETT
T ss_pred eccCC
Confidence 76543
No 253
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.03 E-value=4.4 Score=33.28 Aligned_cols=73 Identities=10% Similarity=-0.059 Sum_probs=44.2
Q ss_pred CcceEEEecC-CCeEEEEeCCCCEEEEEecCCCCC---c---c-EEEEEcCCcccCCCCCcccccCCCCceEEEcCC--C
Q 024317 46 NPHSVIDRPG-SSDLIVLDSSRSAFYTLSFPLSEE---S---V-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK--G 115 (269)
Q Consensus 46 ~P~giav~~~-~g~lyV~D~~~~~I~~~dl~~~~~---g---~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~--G 115 (269)
....+++.+. ++.++++-...+.|..+|+..... + + +..+.+ .-.....+++.++ +
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~ 124 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLND--------------SKGSLYSVKFAPAHLG 124 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECC--------------CSSCEEEEEECCGGGC
T ss_pred cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecc--------------cCCceeEEEEcCCCCC
Confidence 4577888653 366666666677788887631100 0 1 222211 1224577999888 8
Q ss_pred CEEEEeCCCCEEEEEeC
Q 024317 116 NIYVADKSNHVIRKITN 132 (269)
Q Consensus 116 ~lyVaD~~n~~I~~~~~ 132 (269)
+++++=...+.|+.++.
T Consensus 125 ~~l~~~~~dg~v~iwd~ 141 (351)
T 3f3f_A 125 LKLACLGNDGILRLYDA 141 (351)
T ss_dssp SEEEEEETTCEEEEEEC
T ss_pred cEEEEecCCCcEEEecC
Confidence 86666666789999984
No 254
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.93 E-value=1.6 Score=40.30 Aligned_cols=70 Identities=14% Similarity=0.060 Sum_probs=36.8
Q ss_pred eEEEcCCCCEEEEeC--C--CCEEEEEeC--Ccc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCE-EEEEECC
Q 024317 108 SFAVDMKGNIYVADK--S--NHVIRKITN--LGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICA-LLISDHG 179 (269)
Q Consensus 108 giavd~~G~lyVaD~--~--n~~I~~~~~--~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~-LyVaD~~ 179 (269)
.++++++..+|.++. + ..+|+.++. +|. ..+.. .......++++++.. +|++...
T Consensus 69 ~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~-----------------~~~~~~~~~s~dg~~~~~~s~~~ 131 (582)
T 3o4h_A 69 DPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA-----------------VKPMRILSGVDTGEAVVFTGATE 131 (582)
T ss_dssp EECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCEECTT-----------------SCSBEEEEEEECSSCEEEEEECS
T ss_pred cccCCCCeEEEEeccCCCCcceEEEEEeccCCCccccccC-----------------CCCceeeeeCCCCCeEEEEecCC
Confidence 455555533777775 2 336777777 665 42211 112234466666434 5555544
Q ss_pred CCeEEEEECCCCeEEE
Q 024317 180 NQLIRQINLKPEDCSK 195 (269)
Q Consensus 180 n~~I~~~~~~~~~~~~ 195 (269)
+.+..++.+++....
T Consensus 132 -~~~~l~d~~~g~~~~ 146 (582)
T 3o4h_A 132 -DRVALYALDGGGLRE 146 (582)
T ss_dssp -SCEEEEEEETTEEEE
T ss_pred -CCceEEEccCCcEEE
Confidence 445577776665443
No 255
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=91.70 E-value=7.1 Score=36.63 Aligned_cols=116 Identities=10% Similarity=0.032 Sum_probs=56.4
Q ss_pred CcceEEEecCCCeEEEEeCC--------CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-
Q 024317 46 NPHSVIDRPGSSDLIVLDSS--------RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN- 116 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~--------~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~- 116 (269)
....++++|++..|.++... ...|+.+|+ .+|+...+.... ..-..+..++++++|+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~~~~~l~~~~-----------~~~~~~~~~~~SPdG~~ 127 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI---PHGDPQSLDPPE-----------VSNAKLQYAGWGPKGQQ 127 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES---SSCCCEECCCTT-----------CCSCCCSBCCBCSSTTC
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEEC---CCCceEeccCCc-----------cccccccccEECCCCCE
Confidence 36789998755556555321 267778875 344433222110 0011245567777775
Q ss_pred EEEEeCCCCEEEEEeCCcc--eEEecCCCCCC---CCCCCccccccccCceEEEEeCCCCEEEEEE
Q 024317 117 IYVADKSNHVIRKITNLGV--TTIAGGGSKKE---GRADGPAQNASFSNDFELTFVPHICALLISD 177 (269)
Q Consensus 117 lyVaD~~n~~I~~~~~~g~--~~~~g~~~~~~---~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD 177 (269)
|.++.. +.|++++.++. ..+...+.... +..+-...+..+..+.+++++|++..|+++.
T Consensus 128 la~~~~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 128 LIFIFE--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp EEEEET--TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred EEEEEC--CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 444332 46777775443 33322211100 0000000011134557899999966676654
No 256
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=91.10 E-value=5.1 Score=34.30 Aligned_cols=71 Identities=11% Similarity=0.136 Sum_probs=49.8
Q ss_pred CCceEEEcCCCCEEEEeCCCCE-EEEEeCC-cc--eEEe-cCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC
Q 024317 105 KPKSFAVDMKGNIYVADKSNHV-IRKITNL-GV--TTIA-GGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG 179 (269)
Q Consensus 105 ~P~giavd~~G~lyVaD~~n~~-I~~~~~~-g~--~~~~-g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~ 179 (269)
....++++++|.++++=...+. |+.+|.. +. ..+. |.. -...+.++++|+ +.++++-..
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h---------------~~~v~~~~~s~~-~~~l~s~s~ 260 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD---------------RADVVDMKWSTD-GSKLAVVSD 260 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC---------------CSCEEEEEECTT-SCEEEEEET
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC---------------CCcEEEEEECCC-CCEEEEEEC
Confidence 4578999999998877777776 9999964 44 3333 200 124578999998 666666566
Q ss_pred CCeEEEEECCCC
Q 024317 180 NQLIRQINLKPE 191 (269)
Q Consensus 180 n~~I~~~~~~~~ 191 (269)
.+.|+.++....
T Consensus 261 d~~v~iw~~~~~ 272 (355)
T 3vu4_A 261 KWTLHVFEIFND 272 (355)
T ss_dssp TCEEEEEESSCC
T ss_pred CCEEEEEEccCC
Confidence 788999997654
No 257
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=90.90 E-value=6.3 Score=34.33 Aligned_cols=108 Identities=10% Similarity=0.145 Sum_probs=65.5
Q ss_pred CCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCEEEEEeCC-
Q 024317 56 SSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHVIRKITNL- 133 (269)
Q Consensus 56 ~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~I~~~~~~- 133 (269)
++.++++-...+.|+.+|+ .+++ +..+.+.. .-.....+++++++.++++-...+.|+.+|..
T Consensus 181 ~~~~l~~~~~d~~i~iwd~---~~~~~~~~~~~~~------------h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDI---RTLERLQIIENSP------------RHGAVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETTSEEEEEET---TTCCEEEEEECCG------------GGCCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEeCCCeEEEEeC---CCCeeeEEEccCC------------CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 4667777777889999986 3344 33333210 12356789999999977776667889999854
Q ss_pred cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCC---CCEEEEEECCCCeEEEEECCCCeE
Q 024317 134 GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPH---ICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 134 g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~---~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
+. ..+.-.. -.....+++.+. ++.++++-..++.|+.++......
T Consensus 246 ~~~~~~~~~~~---------------~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 246 NVLIRSWSFGD---------------HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp TEEEEEEBCTT---------------CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred ccEEEEEecCC---------------CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 33 2221110 012345644432 255667766777899998876543
No 258
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=90.90 E-value=6.6 Score=33.11 Aligned_cols=114 Identities=17% Similarity=0.087 Sum_probs=66.0
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCC----CccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSE----ESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~----~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
-..++++| ++.++++-...+.|+.+|..... ........ ...-..-..++++++|+++++=.
T Consensus 61 v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~-------------~~h~~~V~~v~~sp~g~~las~s 126 (330)
T 2hes_X 61 IRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAII-------------EGHENEVKGVAWSNDGYYLATCS 126 (330)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEE-------------C----CEEEEEECTTSCEEEEEE
T ss_pred EEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEE-------------cCCCCcEEEEEECCCCCEEEEEe
Confidence 46788875 56666666666778888652100 11111111 01112346799999999777766
Q ss_pred CCCEEEEEeCC--cc--e---EEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 123 SNHVIRKITNL--GV--T---TIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 123 ~n~~I~~~~~~--g~--~---~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
..+.|+.++.. +. . .+.+. -.....|+++|+ +.++++-...+.|+.++....
T Consensus 127 ~D~~v~iwd~~~~~~~~~~~~~~~~h----------------~~~v~~v~~~p~-~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 127 RDKSVWIWETDESGEEYECISVLQEH----------------SQDVKHVIWHPS-EALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp TTSCEEEEECCTTCCCCEEEEEECCC----------------SSCEEEEEECSS-SSEEEEEETTSCEEEEEEETT
T ss_pred CCCEEEEEeccCCCCCeEEEEEeccC----------------CCceEEEEECCC-CCEEEEEcCCCeEEEEECCCC
Confidence 67888888852 21 1 12111 123578999998 556666556678888876543
No 259
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.64 E-value=5.6 Score=34.76 Aligned_cols=109 Identities=12% Similarity=0.042 Sum_probs=62.9
Q ss_pred ceEEEecCCCeEEEEe--CCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEE-Ee-CC
Q 024317 48 HSVIDRPGSSDLIVLD--SSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYV-AD-KS 123 (269)
Q Consensus 48 ~giav~~~~g~lyV~D--~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyV-aD-~~ 123 (269)
..+++.+.+.+++++- +..+.|..+|+ .++........ -.....+++.+++..++ +- ..
T Consensus 280 ~~~~~~p~~~~~la~~~gs~D~~I~iwd~---~t~~~~~~~~~--------------~~~v~~~~~~~~~~~lv~~sg~~ 342 (420)
T 4gga_A 280 KAVAWCPWQSNVLATGGGTSDRHIRIWNV---CSGACLSAVDA--------------HSQVCSILWSPHYKELISGHGFA 342 (420)
T ss_dssp EEEEECTTCTTEEEEEECTTTCEEEEEET---TTTEEEEEEEC--------------SSCEEEEEEETTTTEEEEEECTT
T ss_pred eeeeeCCCcccEEEEEeecCCCEEEEEeC---Cccccceeecc--------------ccceeeeeecCCCCeEEEEEecC
Confidence 3455655555555442 23466777764 34443333211 12446677777777444 43 34
Q ss_pred CCEEEEEeC-Ccc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCC
Q 024317 124 NHVIRKITN-LGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKP 190 (269)
Q Consensus 124 n~~I~~~~~-~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~ 190 (269)
.+.|++++. .+. .++.|. -....+|+++|+ +..+++-...+.|+.++...
T Consensus 343 d~~I~iwd~~~~~~v~~l~gH----------------~~~V~~l~~spd-g~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELKGH----------------TSRVLSLTMSPD-GATVASAAADETLRLWRCFE 395 (420)
T ss_dssp TCCEEEEETTTCCEEEEECCC----------------SSCEEEEEECTT-SSCEEEEETTTEEEEECCSC
T ss_pred CCEEEEEECCCCcEEEEEcCC----------------CCCEEEEEEcCC-CCEEEEEecCCeEEEEECCC
Confidence 678888884 344 444332 124578999998 66666666678888887643
No 260
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=90.44 E-value=11 Score=37.07 Aligned_cols=113 Identities=12% Similarity=0.030 Sum_probs=71.4
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
.....++++| ++.+.++-...+.|+.++. ..++....... -..-..+++.+ |.+.++=...
T Consensus 18 ~~V~~lafsp-dg~~lAsgs~Dg~I~lw~~---~~~~~~~~~~~--------------~~~V~~l~fsp-g~~L~S~s~D 78 (902)
T 2oaj_A 18 SKPIAAAFDF-TQNLLAIATVTGEVHIYGQ---QQVEVVIKLED--------------RSAIKEMRFVK-GIYLVVINAK 78 (902)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSEEEEECS---TTCEEEEECSS--------------CCCEEEEEEET-TTEEEEEETT
T ss_pred CCcEEEEECC-CCCEEEEEeCCCEEEEEeC---CCcEEEEEcCC--------------CCCEEEEEEcC-CCEEEEEECc
Confidence 3568899986 5666666666788999863 23333222110 01236788888 7744444457
Q ss_pred CEEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEE
Q 024317 125 HVIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCS 194 (269)
Q Consensus 125 ~~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~ 194 (269)
+.|+.++... . ..+.. -...+.++++|++..|+++.. ++.|+.++.+.....
T Consensus 79 ~~v~lWd~~~~~~~~~~~~-----------------~~~V~~v~~sp~g~~l~sgs~-dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 79 DTVYVLSLYSQKVLTTVFV-----------------PGKITSIDTDASLDWMLIGLQ-NGSMIVYDIDRDQLS 133 (902)
T ss_dssp CEEEEEETTTCSEEEEEEC-----------------SSCEEEEECCTTCSEEEEEET-TSCEEEEETTTTEEE
T ss_pred CeEEEEECCCCcEEEEEcC-----------------CCCEEEEEECCCCCEEEEEcC-CCcEEEEECCCCccc
Confidence 8999998643 3 23321 023578999998666666665 678999998877653
No 261
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=90.33 E-value=4.8 Score=37.13 Aligned_cols=111 Identities=10% Similarity=-0.048 Sum_probs=64.7
Q ss_pred ceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceE--EEcCCC-CEEEEeCC
Q 024317 48 HSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSF--AVDMKG-NIYVADKS 123 (269)
Q Consensus 48 ~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~gi--avd~~G-~lyVaD~~ 123 (269)
.++++.+ ++ .+++-+..+.|..+|+. .... ...+.+. -..-.+| ++.++| .++++=..
T Consensus 270 ~sv~~s~-~~-~lasgs~DgtV~lWD~~--~~~~~~~~~~~H--------------~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 270 TTFDFLS-PT-TVVCGFKNGFVAEFDLT--DPEVPSFYDQVH--------------DSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp EEEEESS-SS-EEEEEETTSEEEEEETT--BCSSCSEEEECS--------------SSCEEEEEEECCTTSCCEEEEEET
T ss_pred EEEEecC-CC-eEEEEeCCCEEEEEECC--CCCCceEEeecc--------------cccEEEEEEEcCCCCCeEEEEecc
Confidence 4567753 33 45555667888888763 1111 1122211 1122456 345677 78888777
Q ss_pred CCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 124 NHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 124 n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
.+.|+.+|.. +. .++.+... ......|+++|+ +..+++-...+.|+.++....
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~~--------------~~~v~~v~fsp~-~~~l~s~~~d~tv~lwd~~~~ 387 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRFR--------------GSNLVPVVYCPQ-IYSYIYSDGASSLRAVPSRAA 387 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEECS--------------CCSCCCEEEETT-TTEEEEECSSSEEEEEETTCT
T ss_pred CCeEEEEECCCCCcccccccccc--------------cCcccceEeCCC-cCeEEEeCCCCcEEEEECccc
Confidence 8899999853 33 34433210 012357999997 556666666778999987654
No 262
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=90.09 E-value=1.7 Score=37.23 Aligned_cols=79 Identities=9% Similarity=-0.012 Sum_probs=40.0
Q ss_pred CceEEEcCCCC-EEEEe--------CCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEE
Q 024317 106 PKSFAVDMKGN-IYVAD--------KSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALL 174 (269)
Q Consensus 106 P~giavd~~G~-lyVaD--------~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~Ly 174 (269)
|.++++.++|. |+++- ..+..|++++.++. ..+..... .+... ..........++++|++..|+
T Consensus 292 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-~~~~~----~~~~~~~~~~~~~spDg~~l~ 366 (388)
T 3pe7_A 292 YDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDT-SWKVF----EGDRQVTHPHPSFTPDDKQIL 366 (388)
T ss_dssp TTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCC-CCCCB----TTBSSTTCCCCEECTTSSEEE
T ss_pred CCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccC-ccccc----ccccccCCCCccCCCCCCEEE
Confidence 55567777776 44431 45668888887654 44443221 00000 000011245678899866777
Q ss_pred EEECC--CCeEEEEECC
Q 024317 175 ISDHG--NQLIRQINLK 189 (269)
Q Consensus 175 VaD~~--n~~I~~~~~~ 189 (269)
++... ...|++++..
T Consensus 367 ~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 367 FTSDVHGKPALYLATLP 383 (388)
T ss_dssp EEECTTSSCEEEEEECC
T ss_pred EEecCCCceeEEEEECC
Confidence 65543 3356666654
No 263
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=89.99 E-value=3.7 Score=40.99 Aligned_cols=113 Identities=6% Similarity=-0.022 Sum_probs=66.5
Q ss_pred CcceEEEe-cCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCC-CCceEEEcCCCC-EEEEeC
Q 024317 46 NPHSVIDR-PGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFD-KPKSFAVDMKGN-IYVADK 122 (269)
Q Consensus 46 ~P~giav~-~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~-~P~giavd~~G~-lyVaD~ 122 (269)
.+..++++ |++..|.++. ...|+.++. ..+....+... -. .+..+++. +|. |+++..
T Consensus 297 ~v~~~~~S~pdG~~la~~~--~~~i~~~~~---~~~~~~~~~~~--------------~~~~~~~~~~s-dg~~l~~~s~ 356 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS--RGQAFIQDV---SGTYVLKVPEP--------------LRIRYVRRGGD-TKVAFIHGTR 356 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE--TTEEEEECT---TSSBEEECSCC--------------SCEEEEEECSS-SEEEEEEEET
T ss_pred ccceeeecCCCCCEEEEEE--cCEEEEEcC---CCCceEEccCC--------------CcceEEeeeEc-CCCeEEEEEC
Confidence 36788888 7555566665 567888864 34444432111 01 23456666 665 333333
Q ss_pred CCCEEE-EEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEe
Q 024317 123 SNHVIR-KITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSKS 196 (269)
Q Consensus 123 ~n~~I~-~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~~ 196 (269)
..+++ .++.++. ..+.+. -..+..++++|++..|+++.. .+.|+.++..++.....
T Consensus 357 -~~~l~~~~d~~~~~~~~l~~~----------------~~~~~~~~~SpDG~~la~~~~-~~~v~~~d~~tg~~~~~ 415 (1045)
T 1k32_A 357 -EGDFLGIYDYRTGKAEKFEEN----------------LGNVFAMGVDRNGKFAVVAND-RFEIMTVDLETGKPTVI 415 (1045)
T ss_dssp -TEEEEEEEETTTCCEEECCCC----------------CCSEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEEEE
T ss_pred -CCceEEEEECCCCCceEecCC----------------ccceeeeEECCCCCEEEEECC-CCeEEEEECCCCceEEe
Confidence 56788 7886554 333211 134678999998666766665 46899999877654443
No 264
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=89.94 E-value=1.9 Score=40.62 Aligned_cols=118 Identities=6% Similarity=-0.091 Sum_probs=64.2
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC-C
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK-S 123 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~-~ 123 (269)
.+..+++++ +|.++.+ ...+.|+.+|. .+|+......... ..-.....++++++|+ |.++.. .
T Consensus 18 ~~~~~~~sp-dg~~~~~-~~dg~i~~~d~---~~g~~~~~~~~~~----------~~~~~v~~~~~SpDg~~l~~~~~~~ 82 (723)
T 1xfd_A 18 HDPEAKWIS-DTEFIYR-EQKGTVRLWNV---ETNTSTVLIEGKK----------IESLRAIRYEISPDREYALFSYNVE 82 (723)
T ss_dssp CCCCCCBSS-SSCBCCC-CSSSCEEEBCG---GGCCCEEEECTTT----------TTTTTCSEEEECTTSSEEEEEESCC
T ss_pred cccccEEcC-CCcEEEE-eCCCCEEEEEC---CCCcEEEEecccc----------ccccccceEEECCCCCEEEEEecCc
Confidence 477788876 5554444 44567888875 3454444432110 0001367899999999 444422 1
Q ss_pred -------CCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 124 -------NHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 124 -------n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
...|++++.++. ..+..... .-..+..++++|++..|.++.. +.|+.++..++..
T Consensus 83 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-------------~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~ 146 (723)
T 1xfd_A 83 PIYQHSYTGYYVLSKIPHGDPQSLDPPEV-------------SNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQA 146 (723)
T ss_dssp CCSSSCCCSEEEEEESSSCCCEECCCTTC-------------CSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCC
T ss_pred cceeecceeeEEEEECCCCceEeccCCcc-------------ccccccccEECCCCCEEEEEEC--CeEEEEECCCCce
Confidence 257788886543 23322110 0112456777887555655443 5688887766543
No 265
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=89.68 E-value=14 Score=34.84 Aligned_cols=131 Identities=4% Similarity=-0.031 Sum_probs=73.4
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCCCC-----CccEEE--EEcCCc---ccCCCCCc---cc-ccCCCCceEE
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSE-----ESVVKR--LAGDGV---QGYSDGEP---GS-ARFDKPKSFA 110 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~-----~g~~~~--~~g~g~---~g~~dg~~---~~-~~~~~P~gia 110 (269)
..-..|+++| +|.++++-+....|. |..... .+.+.. +...|. -...++.. .. ..-....+++
T Consensus 16 ~~v~sv~~Sp-DG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~va 92 (588)
T 2j04_A 16 DWKNNLTWAR-DGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCK 92 (588)
T ss_dssp SSSCCEEECT-TSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEE
T ss_pred ccEEEEEECC-CCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEE
Confidence 4578899974 889998877777775 321100 011111 111111 00111111 00 1123457899
Q ss_pred EcCCCCEEEEeCCCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC
Q 024317 111 VDMKGNIYVADKSNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 111 vd~~G~lyVaD~~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~ 189 (269)
+.++|....+=..++.|+.++.++. ..+. ....- . =..-..++++|++..|+++.. .+.|+.++..
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~---------~--~~sv~svafSPDG~~LAsgs~-DGtVkIWd~~ 159 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNL---------S--SRTYHCFEWNPIESSIVVGNE-DGELQFFSIR 159 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCS---------T--TTCEEEEEECSSSSCEEEEET-TSEEEEEECC
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCcc---------c--cccEEEEEEcCCCCEEEEEcC-CCEEEEEECC
Confidence 9999996666666788999986664 3322 11000 0 013468999999555665554 6889999988
Q ss_pred CC
Q 024317 190 PE 191 (269)
Q Consensus 190 ~~ 191 (269)
++
T Consensus 160 ~~ 161 (588)
T 2j04_A 160 KN 161 (588)
T ss_dssp CC
T ss_pred CC
Confidence 76
No 266
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=89.59 E-value=7.9 Score=31.98 Aligned_cols=31 Identities=6% Similarity=0.014 Sum_probs=22.8
Q ss_pred CceEEEEeCCC--CEEEEEECCCCeEEEEECCC
Q 024317 160 NDFELTFVPHI--CALLISDHGNQLIRQINLKP 190 (269)
Q Consensus 160 ~P~gia~~~~~--g~LyVaD~~n~~I~~~~~~~ 190 (269)
...+|+++|+. +.++++-...+.|+.++.+.
T Consensus 206 ~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 206 WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 45789999873 46677766678898888664
No 267
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=89.47 E-value=8.8 Score=32.35 Aligned_cols=72 Identities=10% Similarity=-0.053 Sum_probs=48.6
Q ss_pred CceEEEcC--CCCEEEEeCCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC
Q 024317 106 PKSFAVDM--KGNIYVADKSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ 181 (269)
Q Consensus 106 P~giavd~--~G~lyVaD~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~ 181 (269)
...+++++ +++++++=...+.|+.++.... ........ -.....++++|+ +.++++-..++
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~--------------~~~i~~~~~~pd-g~~lasg~~dg 192 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS--------------DVEYSSGVLHKD-SLLLALYSPDG 192 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS--------------SCCCCEEEECTT-SCEEEEECTTS
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC--------------CCceEEEEECCC-CCEEEEEcCCC
Confidence 46788888 8888887667788999986443 22221110 123578999998 77777766678
Q ss_pred eEEEEECCCCe
Q 024317 182 LIRQINLKPED 192 (269)
Q Consensus 182 ~I~~~~~~~~~ 192 (269)
.|+.++.....
T Consensus 193 ~i~iwd~~~~~ 203 (343)
T 3lrv_A 193 ILDVYNLSSPD 203 (343)
T ss_dssp CEEEEESSCTT
T ss_pred EEEEEECCCCC
Confidence 99999987654
No 268
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=88.73 E-value=9.6 Score=31.84 Aligned_cols=56 Identities=14% Similarity=0.029 Sum_probs=32.5
Q ss_pred CCceEEEcCCCC-EEEEe-C---CCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEE
Q 024317 105 KPKSFAVDMKGN-IYVAD-K---SNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISD 177 (269)
Q Consensus 105 ~P~giavd~~G~-lyVaD-~---~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD 177 (269)
....+++.++|. |+++. . +...|++++.++. ..+.... . ...++++|++..|+++.
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~----------------~-~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK----------------N-IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES----------------E-EEEEEECTTSSEEEEEE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC----------------C-ccceeECCCCCEEEEEE
Confidence 345678888887 44443 2 2345778876543 3333210 1 46778888866676664
No 269
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=88.44 E-value=5.4 Score=35.60 Aligned_cols=73 Identities=14% Similarity=0.029 Sum_probs=50.1
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCC
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSN 124 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n 124 (269)
...+|+++|..++++++-...+.|+.+|+. ++. +....+ .-....+++++++|..+++=..+
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~~---~~~~~~~~~~--------------~~~~v~~v~wspdg~~lasgs~d 213 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQVT---ETVKVCATLP--------------STVAVTSVCWSPKGKQLAVGKQN 213 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEES---SSEEEEEEEC--------------GGGCEEEEEECTTSSCEEEEETT
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEcC---CCcceeeccC--------------CCCceeEEEEcCCCCEEEEEcCC
Confidence 457889987657888877778889999863 332 222221 11256789999999855555567
Q ss_pred CEEEEEeCCcc
Q 024317 125 HVIRKITNLGV 135 (269)
Q Consensus 125 ~~I~~~~~~g~ 135 (269)
+.|+.++..+.
T Consensus 214 g~v~iwd~~~~ 224 (434)
T 2oit_A 214 GTVVQYLPTLQ 224 (434)
T ss_dssp SCEEEECTTCC
T ss_pred CcEEEEccCCc
Confidence 89999998765
No 270
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.18 E-value=11 Score=31.90 Aligned_cols=82 Identities=11% Similarity=0.093 Sum_probs=43.2
Q ss_pred EEEcC-CCCEEEEeC----------------CCCEEEEEeCCc-c-eEEecCCCCCCCCCCCccccccccCceEEEEeCC
Q 024317 109 FAVDM-KGNIYVADK----------------SNHVIRKITNLG-V-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPH 169 (269)
Q Consensus 109 iavd~-~G~lyVaD~----------------~n~~I~~~~~~g-~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~ 169 (269)
+++.+ +|.++++.. +...|++++.++ . ..+...... ....+. .....+..++++++
T Consensus 287 ~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~-~~~~~~----~~~~~~~~~~~s~d 361 (396)
T 3c5m_A 287 HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTS-WDVLDG----DRQITHPHPSFTPN 361 (396)
T ss_dssp EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCC-CCCBTT----BSSTTCCCCEECTT
T ss_pred CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCc-cccccc----cccCCCCCceEccC
Confidence 67777 888666532 346899998654 3 444332110 000000 00112345677888
Q ss_pred CCEEEEEECC--CCeEEEEECCCCeEEE
Q 024317 170 ICALLISDHG--NQLIRQINLKPEDCSK 195 (269)
Q Consensus 170 ~g~LyVaD~~--n~~I~~~~~~~~~~~~ 195 (269)
+..|+++... ...|+.++.++.....
T Consensus 362 g~~l~~~s~~~~~~~l~~~~~~~~~~~~ 389 (396)
T 3c5m_A 362 DDGVLFTSDFEGVPAIYIADVPESYKHL 389 (396)
T ss_dssp SSEEEEEECTTSSCEEEEEECCTTCC--
T ss_pred CCeEEEEecCCCCceEEEEEEccccccc
Confidence 6677766543 3367888776655443
No 271
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=88.08 E-value=13 Score=32.56 Aligned_cols=68 Identities=15% Similarity=0.116 Sum_probs=42.0
Q ss_pred EEcCCCCEEEEeCCCCEEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEE
Q 024317 110 AVDMKGNIYVADKSNHVIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQI 186 (269)
Q Consensus 110 avd~~G~lyVaD~~n~~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~ 186 (269)
++.++++++++-...+.|+.+|... . ..+.+. -.....+++++++..|+ +-..++.|+.+
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~l~-sg~~dg~i~vw 337 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH----------------TDRIYSTIYDHERKRCI-SASMDTTIRIW 337 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC----------------SSCEEEEEEETTTTEEE-EEETTSCEEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC----------------CCCEEEEEEcCCCCEEE-EEeCCCcEEEE
Confidence 4456677666666677888888543 3 233221 13457889998744444 44456789999
Q ss_pred ECCCCeEE
Q 024317 187 NLKPEDCS 194 (269)
Q Consensus 187 ~~~~~~~~ 194 (269)
+.......
T Consensus 338 d~~~~~~~ 345 (464)
T 3v7d_B 338 DLENGELM 345 (464)
T ss_dssp ETTTTEEE
T ss_pred ECCCCcEE
Confidence 98765443
No 272
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=87.92 E-value=18 Score=34.02 Aligned_cols=114 Identities=17% Similarity=0.100 Sum_probs=68.4
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc--------EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV--------VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIY 118 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~--------~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~ly 118 (269)
-..++++|++..|+++ ...+.|..+|+. .+. +.++-+.. ......-..+++.++| +
T Consensus 132 v~svafSPDG~~LAsg-s~DGtVkIWd~~---~~~l~~~~~i~l~ti~~~~----------~gh~~~V~sVawSPdg--L 195 (588)
T 2j04_A 132 YHCFEWNPIESSIVVG-NEDGELQFFSIR---KNSENTPEFYFESSIRLSD----------AGSKDWVTHIVWYEDV--L 195 (588)
T ss_dssp EEEEEECSSSSCEEEE-ETTSEEEEEECC---CCTTTCCCCEEEEEEECSC----------TTCCCCEEEEEEETTE--E
T ss_pred EEEEEEcCCCCEEEEE-cCCCEEEEEECC---CCccccccceeeeeeeccc----------ccccccEEEEEEcCCc--E
Confidence 4568888744444444 457788888753 232 23332111 0112456789999999 5
Q ss_pred EEeCCCCEEEEEeCCcc--e----EEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCe
Q 024317 119 VADKSNHVIRKITNLGV--T----TIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPED 192 (269)
Q Consensus 119 VaD~~n~~I~~~~~~g~--~----~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~ 192 (269)
++-...+.|+.++.++. . ++... . -....+++++ + ..|.++. .+.|+.++..+..
T Consensus 196 aass~D~tVrlWd~~~~~~~~~~~tL~~~-h--------------~~~V~svaFs-g-~~LASa~--~~tIkLWd~~~~~ 256 (588)
T 2j04_A 196 VAALSNNSVFSMTVSASSHQPVSRMIQNA-S--------------RRKITDLKIV-D-YKVVLTC--PGYVHKIDLKNYS 256 (588)
T ss_dssp EEEETTCCEEEECCCSSSSCCCEEEEECC-C--------------SSCCCCEEEE-T-TEEEEEC--SSEEEEEETTTTE
T ss_pred EEEeCCCeEEEEECCCCccccceeeeccc-c--------------cCcEEEEEEE-C-CEEEEEe--CCeEEEEECCCCe
Confidence 55556788998887664 2 12111 0 1245788887 3 5666654 4799999988877
Q ss_pred EEE
Q 024317 193 CSK 195 (269)
Q Consensus 193 ~~~ 195 (269)
...
T Consensus 257 ~~~ 259 (588)
T 2j04_A 257 ISS 259 (588)
T ss_dssp EEE
T ss_pred EEE
Confidence 633
No 273
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=87.92 E-value=15 Score=34.89 Aligned_cols=34 Identities=12% Similarity=0.024 Sum_probs=23.3
Q ss_pred EEEecCCCeEEEEeCCC------------------CEEEEEecCCCCCccEEEEE
Q 024317 50 VIDRPGSSDLIVLDSSR------------------SAFYTLSFPLSEESVVKRLA 86 (269)
Q Consensus 50 iav~~~~g~lyV~D~~~------------------~~I~~~dl~~~~~g~~~~~~ 86 (269)
+++++..+.+|+..... ..|+.+|. .+|++....
T Consensus 235 ~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~---~tG~~~W~~ 286 (668)
T 1kv9_A 235 MAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRP---DTGKLAWHY 286 (668)
T ss_dssp EEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECT---TTCCEEEEE
T ss_pred eEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcC---CCCceeeEe
Confidence 68877778888886432 25888874 578766654
No 274
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=87.30 E-value=12 Score=31.38 Aligned_cols=111 Identities=9% Similarity=0.008 Sum_probs=63.5
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
-..+++++ + ++++-...+.|+.+|+. ....+.......+ ..-..-..+++.++++++++=...+.
T Consensus 17 v~~~~~s~--~-~las~~~D~~i~lw~~~-~~~~~~~~~~~~~-----------~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 17 IWSFDFSQ--G-ILATGSTDRKIKLVSVK-YDDFTLIDVLDET-----------AHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp EEEEEEET--T-EEEEEESSSCEEEEECS-SSCCEEEEEECTT-----------CCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeeccCC--C-EEEEEcCCCEEEEEEec-CCCeEEEEEEecC-----------CccCCEEEEEECCCCCEEEEEeCCCc
Confidence 35677753 2 55555566788888753 1112222222110 01123467999999997777766788
Q ss_pred EEEEeCCcc----------eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC
Q 024317 127 IRKITNLGV----------TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 127 I~~~~~~g~----------~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~ 189 (269)
|+.++.... ..+.+. -....+++++|+ +.++++-...+.|+.++.+
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h----------------~~~V~~v~~sp~-g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGH----------------ENEVKGVAWSND-GYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC--------------------CEEEEEECTT-SCEEEEEETTSCEEEEECC
T ss_pred EEEEEcccCcCccccceeEEEEcCC----------------CCcEEEEEECCC-CCEEEEEeCCCEEEEEecc
Confidence 888875321 111111 123578999998 5555555557789999874
No 275
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.98 E-value=5.7 Score=33.79 Aligned_cols=75 Identities=9% Similarity=0.001 Sum_probs=41.4
Q ss_pred CceEEEcC-CCC-EEE-EeCCC----CEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEE
Q 024317 106 PKSFAVDM-KGN-IYV-ADKSN----HVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLIS 176 (269)
Q Consensus 106 P~giavd~-~G~-lyV-aD~~n----~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVa 176 (269)
...+++.+ +|. |++ ++... .+|+.++.++. ..+.. ... -..+..++++|++..|+++
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~-------------~~~~~~~~~spdg~~l~~~ 255 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAE-------------GESCTHEFWIPDGSAMAYV 255 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCT-------------TEEEEEEEECTTSSCEEEE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCC-------------CccccceEECCCCCEEEEE
Confidence 35677777 565 444 43222 47888887654 33221 000 1134567889885556554
Q ss_pred -EC-CCCe--EEEEECCCCeEE
Q 024317 177 -DH-GNQL--IRQINLKPEDCS 194 (269)
Q Consensus 177 -D~-~n~~--I~~~~~~~~~~~ 194 (269)
.. +... |++++..++...
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~ 277 (396)
T 3c5m_A 256 SYFKGQTDRVIYKANPETLENE 277 (396)
T ss_dssp EEETTTCCEEEEEECTTTCCEE
T ss_pred ecCCCCccceEEEEECCCCCeE
Confidence 32 3334 899988765443
No 276
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=84.29 E-value=16 Score=30.02 Aligned_cols=113 Identities=12% Similarity=0.089 Sum_probs=64.7
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcC--CCCEEEEeCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM--KGNIYVADKS 123 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~--~G~lyVaD~~ 123 (269)
-..+++++ ++..+++-...+.|+.+|+. ...++ +.++.|. -..-..+++.+ +|+++++=..
T Consensus 12 V~~~~~s~-~g~~las~s~D~~v~iw~~~-~~~~~~~~~l~gH--------------~~~V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 12 IHDAVMDY-YGKRMATCSSDKTIKIFEVE-GETHKLIDTLTGH--------------EGPVWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEEBC-SSCBCCCEEECCC--------------SSCEEEEEECCGGGCSEEEEEET
T ss_pred eEEEEECC-CCCEEEEEeCCCEEEEEecC-CCCcEEEEEEccc--------------cCCeEEEEecCCCcCCEEEEEcC
Confidence 36788864 67777776677888888753 11222 2233221 11234677754 4777777666
Q ss_pred CCEEEEEeCC-cc----eEEecCCCCCCCCCCCccccccccCceEEEEeCCC-CEEEEEECCCCeEEEEECCCC
Q 024317 124 NHVIRKITNL-GV----TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHI-CALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 124 n~~I~~~~~~-g~----~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~-g~LyVaD~~n~~I~~~~~~~~ 191 (269)
.+.|+.++.. +. ..+.+. -...+.++++|+. +.++++-...+.|+.++....
T Consensus 76 D~~v~iWd~~~~~~~~~~~~~~h----------------~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 76 DGKVMIWKEENGRWSQIAVHAVH----------------SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp TTEEEEEEBSSSCBCCCEEECCC----------------SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCEEEEEEcCCCceEEEEEeecC----------------CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 7888888853 21 222211 1234678888752 444444445678888887643
No 277
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=84.18 E-value=29 Score=32.90 Aligned_cols=74 Identities=14% Similarity=0.081 Sum_probs=43.2
Q ss_pred ceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCC----
Q 024317 48 HSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS---- 123 (269)
Q Consensus 48 ~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~---- 123 (269)
.++++ .++.||+... .++|+.+| ..+|++......+. ....+ ......| ++ .++.+||....
T Consensus 122 ~~~a~--~~~~v~v~~~-dg~l~alD---~~tG~~~W~~~~~~-~~~~~---~~~~~~p---~v-~~~~v~v~~~~~~~~ 187 (677)
T 1kb0_A 122 RGVAL--WKGKVYVGAW-DGRLIALD---AATGKEVWHQNTFE-GQKGS---LTITGAP---RV-FKGKVIIGNGGAEYG 187 (677)
T ss_dssp CCCEE--ETTEEEEECT-TSEEEEEE---TTTCCEEEEEETTT-TCCSS---CBCCSCC---EE-ETTEEEECCBCTTTC
T ss_pred CCceE--ECCEEEEEcC-CCEEEEEE---CCCCCEEeeecCCc-CcCcC---cccccCc---EE-ECCEEEEEecccccC
Confidence 46777 3789999854 57899998 36788766543320 00000 0111122 23 26778887653
Q ss_pred -CCEEEEEeC-Ccc
Q 024317 124 -NHVIRKITN-LGV 135 (269)
Q Consensus 124 -n~~I~~~~~-~g~ 135 (269)
.+.|+.+|. +|+
T Consensus 188 ~~g~v~a~D~~tG~ 201 (677)
T 1kb0_A 188 VRGYITAYDAETGE 201 (677)
T ss_dssp CBCEEEEEETTTCC
T ss_pred CCCEEEEEECCCCc
Confidence 578999995 566
No 278
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=84.04 E-value=12 Score=35.09 Aligned_cols=118 Identities=6% Similarity=-0.054 Sum_probs=65.4
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC---
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK--- 122 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~--- 122 (269)
+.++++.+ ++.++.+. ..+.|+.+|. ..|+...+..... ... .....++++++|+ |.++..
T Consensus 18 ~~~~~~s~-dg~~~~~~-~d~~i~~~~~---~~g~~~~~~~~~~---------~~~-~~~~~~~~SpDg~~la~~~~~~~ 82 (719)
T 1z68_A 18 TFFPNWIS-GQEYLHQS-ADNNIVLYNI---ETGQSYTILSNRT---------MKS-VNASNYGLSPDRQFVYLESDYSK 82 (719)
T ss_dssp CCCCEESS-SSEEEEEC-TTSCEEEEES---SSCCEEEEECHHH---------HHT-TTCSEEEECTTSSEEEEEEEEEE
T ss_pred CCccEECC-CCeEEEEc-CCCCEEEEEc---CCCcEEEEEcccc---------ccc-cceeeEEECCCCCeEEEEecCce
Confidence 34667765 45554444 4667888874 4555555442110 000 1246789999998 444432
Q ss_pred -----CCCEEEEEeCCcceEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEE
Q 024317 123 -----SNHVIRKITNLGVTTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCSK 195 (269)
Q Consensus 123 -----~n~~I~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~~ 195 (269)
....|++++.++...+..... -.....++++|++..|.++. ++.|+.++..++....
T Consensus 83 ~~~~s~~~~i~~~d~~~g~~~~~~~l--------------~~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~~ 144 (719)
T 1z68_A 83 LWRYSYTATYYIYDLSNGEFVRGNEL--------------PRPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPFQ 144 (719)
T ss_dssp CSSSCEEEEEEEEETTTTEECCSSCC--------------CSSBCCEEECSSTTCEEEEE--TTEEEEESSTTSCCEE
T ss_pred eEEeecceEEEEEECCCCccccceec--------------CcccccceECCCCCEEEEEE--CCeEEEEeCCCCCcEE
Confidence 135788887654322100000 02245688899866666554 4678888887655443
No 279
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=83.09 E-value=4.4 Score=38.14 Aligned_cols=83 Identities=13% Similarity=0.058 Sum_probs=56.7
Q ss_pred CCCceEEEcCCCC-EEEEeCCCCEEEEEeCCcc-eEEecCCCCCCCCCCC-ccccccccCceEEEEeCCCCEEEEEECCC
Q 024317 104 DKPKSFAVDMKGN-IYVADKSNHVIRKITNLGV-TTIAGGGSKKEGRADG-PAQNASFSNDFELTFVPHICALLISDHGN 180 (269)
Q Consensus 104 ~~P~giavd~~G~-lyVaD~~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~-~~~~~~l~~P~gia~~~~~g~LyVaD~~n 180 (269)
++|+|+-++|+|. +|++.....++.+++-+.. ..+.+.-. ...+. .+....=..|...+++++ |+.|.+=.-.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~---~~~~~~~ae~e~GlGPlHt~Fd~~-G~aYTtlfid 398 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLA---DPRDVIVGEPELGLGPLHTTFDGR-GNAYTTLFID 398 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCS---CGGGGEEECCBCCSCEEEEEECSS-SEEEEEETTT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcccc---CcccceEeeccCCCcccEEEECCC-CceEeeeeec
Confidence 7899999999999 8888888889998886533 22221100 00000 000011247999999997 8999999988
Q ss_pred CeEEEEECCC
Q 024317 181 QLIRQINLKP 190 (269)
Q Consensus 181 ~~I~~~~~~~ 190 (269)
..|.+|+.+.
T Consensus 399 SqvvkWni~~ 408 (638)
T 3sbq_A 399 SQVVKWNMEE 408 (638)
T ss_dssp TEEEEEEHHH
T ss_pred ceEEEEeccH
Confidence 9999998764
No 280
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=82.99 E-value=21 Score=30.34 Aligned_cols=61 Identities=7% Similarity=-0.032 Sum_probs=36.5
Q ss_pred CceEEEEeCCCCEEEEEECCCCe-EEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEc
Q 024317 160 NDFELTFVPHICALLISDHGNQL-IRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR 233 (269)
Q Consensus 160 ~P~gia~~~~~g~LyVaD~~n~~-I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad 233 (269)
..+.|+++|+ +.++++-...+. |+.++............+ . .-.....++++++|+..++-
T Consensus 197 ~v~~~~~s~~-g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g-~-----------h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 197 PIKMVRLNRK-SDMVATCSQDGTIIRVFKTEDGVLVREFRRG-L-----------DRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp CEEEEEECTT-SSEEEEEETTCSEEEEEETTTCCEEEEEECT-T-----------CCSCEEEEEECTTSCEEEEE
T ss_pred ceEEEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEEEEEcC-C-----------CCCcEEEEEECCCCCEEEEE
Confidence 3578999998 666666666676 999998765443322110 0 01234567777777554443
No 281
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=82.94 E-value=13 Score=31.05 Aligned_cols=110 Identities=15% Similarity=0.077 Sum_probs=64.1
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc---EEEEEcCCcccCCCCCcccccCCCCceEEEcC--CCCEEEEe
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV---VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDM--KGNIYVAD 121 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~---~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~--~G~lyVaD 121 (269)
-..+++++ +++..++-+..+.|+.+|+. ++. +..+.|. -..-..+++.+ +|+++++=
T Consensus 16 V~~v~~s~-~g~~lasgs~D~~v~lwd~~---~~~~~~~~~l~gH--------------~~~V~~v~~~~~~~~~~l~s~ 77 (316)
T 3bg1_A 16 IHDAQMDY-YGTRLATCSSDRSVKIFDVR---NGGQILIADLRGH--------------EGPVWQVAWAHPMYGNILASC 77 (316)
T ss_dssp EEEEEECG-GGCEEEEEETTTEEEEEEEE---TTEEEEEEEEECC--------------SSCEEEEEECCGGGSSCEEEE
T ss_pred EEEeeEcC-CCCEEEEEeCCCeEEEEEec---CCCcEEEEEEcCC--------------CccEEEEEeCCCCCCCEEEEE
Confidence 36788865 67777776777888888752 332 2223221 11235677753 36766665
Q ss_pred CCCCEEEEEeCC-cc----eEEecCCCCCCCCCCCccccccccCceEEEEeCCC-CEEEEEECCCCeEEEEECCC
Q 024317 122 KSNHVIRKITNL-GV----TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHI-CALLISDHGNQLIRQINLKP 190 (269)
Q Consensus 122 ~~n~~I~~~~~~-g~----~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~-g~LyVaD~~n~~I~~~~~~~ 190 (269)
...+.|+.++.. +. ..+.+. -...+.|+++|+. +.++++-...+.|+.++...
T Consensus 78 s~D~~v~iWd~~~~~~~~~~~~~~h----------------~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 78 SYDRKVIIWREENGTWEKSHEHAGH----------------DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp ETTSCEEEECCSSSCCCEEEEECCC----------------SSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred ECCCEEEEEECCCCcceEEEEccCC----------------CCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 566788888754 32 122221 1235678888762 45566656667787777654
No 282
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=82.19 E-value=5.4 Score=36.76 Aligned_cols=67 Identities=4% Similarity=0.015 Sum_probs=47.6
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeE
Q 024317 107 KSFAVDMKGNIYVADKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLI 183 (269)
Q Consensus 107 ~giavd~~G~lyVaD~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I 183 (269)
..+++.+++..+++-...+.|+.++.. +. .++.+. -...+.|+++|+ +.++++-...+.|
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH----------------~~~V~sva~Sp~-g~~l~Sgs~Dgtv 421 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR----------------ETTITAIGVSRL-HPMVLAGSADGSL 421 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEEC----------------SSCEEEEECCSS-CCBCEEEETTTEE
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecC----------------CCceEEEEeCCC-CCeEEEEECCCEE
Confidence 579999999988887777889999843 33 444442 234578999987 6666666667788
Q ss_pred EEEECCC
Q 024317 184 RQINLKP 190 (269)
Q Consensus 184 ~~~~~~~ 190 (269)
+.++...
T Consensus 422 ~lwd~~~ 428 (524)
T 2j04_B 422 IITNAAR 428 (524)
T ss_dssp ECCBSCS
T ss_pred EEEechH
Confidence 8887654
No 283
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=82.11 E-value=24 Score=30.43 Aligned_cols=171 Identities=11% Similarity=0.009 Sum_probs=78.6
Q ss_pred CcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCcc-EEEEEcCC--cccC-------CCC--CcccccCCCCceEEEc-
Q 024317 46 NPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESV-VKRLAGDG--VQGY-------SDG--EPGSARFDKPKSFAVD- 112 (269)
Q Consensus 46 ~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~-~~~~~g~g--~~g~-------~dg--~~~~~~~~~P~giavd- 112 (269)
....+++.|.+.+++++-...+.|..+|+. .++ ........ .... ... .........-..+.+.
T Consensus 188 ~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~---t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~ 264 (393)
T 4gq1_A 188 PGISVQFRPSNPNQLIVGERNGNIRIFDWT---LNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIG 264 (393)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEETT---CCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEET
T ss_pred CcEEEEECCCCCceEEecCCCCEEEEEECC---CCcccccccccCCcccceEEecccccceeeeecccccccceeeeeec
Confidence 457889987666677777778899999863 222 11111110 0000 000 0001112233456665
Q ss_pred CCCCEEEEeCCCCEEEEEeCCc-c--eEEecCCCCCC--CCCCCccccccccCceEEEEeCC-CCEEEEEECCCCeEEEE
Q 024317 113 MKGNIYVADKSNHVIRKITNLG-V--TTIAGGGSKKE--GRADGPAQNASFSNDFELTFVPH-ICALLISDHGNQLIRQI 186 (269)
Q Consensus 113 ~~G~lyVaD~~n~~I~~~~~~g-~--~~~~g~~~~~~--~~~~~~~~~~~l~~P~gia~~~~-~g~LyVaD~~n~~I~~~ 186 (269)
++|...++-...+.++.++... . ..+.+...... ................+..+.+. ++.+.++-...+.|+.+
T Consensus 265 ~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lw 344 (393)
T 4gq1_A 265 SDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLI 344 (393)
T ss_dssp TTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEE
Confidence 5888777777788888887432 1 22222110000 00000000011122233334443 24455566667889999
Q ss_pred ECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEc
Q 024317 187 NLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR 233 (269)
Q Consensus 187 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad 233 (269)
+............ .-.....+++.++|+...+-
T Consensus 345 d~~~~~~~~~~~~--------------~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 345 NTYEKDSNSIPIQ--------------LGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp ETTCTTCCEEEEE--------------CSSCEEEEEECTTSSEEEEE
T ss_pred ECCCCcEEEEecC--------------CCCcEEEEEEcCCCCEEEEE
Confidence 8765432211111 00235679999999665554
No 284
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=80.79 E-value=39 Score=32.05 Aligned_cols=35 Identities=11% Similarity=-0.034 Sum_probs=23.5
Q ss_pred eEEEecCCCeEEEEeCCC------------------CEEEEEecCCCCCccEEEEE
Q 024317 49 SVIDRPGSSDLIVLDSSR------------------SAFYTLSFPLSEESVVKRLA 86 (269)
Q Consensus 49 giav~~~~g~lyV~D~~~------------------~~I~~~dl~~~~~g~~~~~~ 86 (269)
.+++++..+.+|+...+. ..|+.+|. .+|+.....
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~---~TG~~~W~~ 291 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNA---DTGEYVWHY 291 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEET---TTCCEEEEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEc---cCCceeEee
Confidence 467877778888875432 14888884 577766543
No 285
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=80.19 E-value=26 Score=29.70 Aligned_cols=61 Identities=8% Similarity=0.102 Sum_probs=39.5
Q ss_pred CCCCEEEEeCCCCEEEEEeC-CcceEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCC
Q 024317 113 MKGNIYVADKSNHVIRKITN-LGVTTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPE 191 (269)
Q Consensus 113 ~~G~lyVaD~~n~~I~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~ 191 (269)
.++.+|++.. ++.+..++. +|+..+.-. +..+.+++++ ++.||+++. ++.|+.++...+
T Consensus 238 ~~~~v~~~~~-~g~l~~~d~~tG~~~w~~~----------------~~~~~~~~~~--~~~l~~~~~-~g~l~~~d~~tG 297 (376)
T 3q7m_A 238 VNGVVFALAY-NGNLTALDLRSGQIMWKRE----------------LGSVNDFIVD--GNRIYLVDQ-NDRVMALTIDGG 297 (376)
T ss_dssp ETTEEEEECT-TSCEEEEETTTCCEEEEEC----------------CCCEEEEEEE--TTEEEEEET-TCCEEEEETTTC
T ss_pred ECCEEEEEec-CcEEEEEECCCCcEEeecc----------------CCCCCCceEE--CCEEEEEcC-CCeEEEEECCCC
Confidence 3678888864 568888886 455333211 2234456655 379999986 467999997655
Q ss_pred eE
Q 024317 192 DC 193 (269)
Q Consensus 192 ~~ 193 (269)
..
T Consensus 298 ~~ 299 (376)
T 3q7m_A 298 VT 299 (376)
T ss_dssp CE
T ss_pred cE
Confidence 43
No 286
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=79.68 E-value=42 Score=31.75 Aligned_cols=115 Identities=10% Similarity=-0.060 Sum_probs=58.2
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccC-CCCceEEEcCCCC-EEE-EeCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARF-DKPKSFAVDMKGN-IYV-ADKS 123 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~-~~P~giavd~~G~-lyV-aD~~ 123 (269)
-..+++.+ ++.+++++ .+.|+.+|. .+|+...+..... . ..+ ....+++++++|. |.+ ++..
T Consensus 19 ~~~~~w~~-dg~~~~~~--~~~i~~~~~---~~~~~~~~~~~~~--------~-~~~~~~~~~~~~Spdg~~l~~~~~~~ 83 (740)
T 4a5s_A 19 LYSLRWIS-DHEYLYKQ--ENNILVFNA---EYGNSSVFLENST--------F-DEFGHSINDYSISPDGQFILLEYNYV 83 (740)
T ss_dssp CCCEEECS-SSEEEEEE--TTEEEEEET---TTCCEEEEECTTT--------T-TTCCSCCCEEEECTTSSEEEEEEEEE
T ss_pred ccccEECC-CCcEEEEc--CCcEEEEEC---CCCceEEEEechh--------h-hhhcccccceEECCCCCEEEEEECCe
Confidence 34677764 56776666 678999985 3555444432210 0 001 1224588888998 333 3211
Q ss_pred -------CCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeEE
Q 024317 124 -------NHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDCS 194 (269)
Q Consensus 124 -------n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~~ 194 (269)
...+..+|..+. ..+.... ..-...+++|++..|..+. ++.|+.++..++...
T Consensus 84 ~~~r~~~~~~~~~~d~~~~~~~~l~~~~----------------~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 84 KQWRHSYTASYDIYDLNKRQLITEERIP----------------NNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNLPSY 145 (740)
T ss_dssp ECSSSCEEEEEEEEETTTTEECCSSCCC----------------TTEEEEEECSSTTCEEEEE--TTEEEEESSTTSCCE
T ss_pred eeEEEccceEEEEEECCCCcEEEcccCC----------------CcceeeEECCCCCEEEEEE--CCeEEEEECCCCceE
Confidence 134556665443 2221110 1124566777755554432 245777766554433
No 287
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=79.26 E-value=31 Score=29.96 Aligned_cols=64 Identities=19% Similarity=0.239 Sum_probs=36.2
Q ss_pred CCCEEEEeCCCCEEEEEeC-Ccc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCC
Q 024317 114 KGNIYVADKSNHVIRKITN-LGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKP 190 (269)
Q Consensus 114 ~G~lyVaD~~n~~I~~~~~-~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~ 190 (269)
+++++++-..++.|+.++. .+. ..+.+... .-.....+++++ ..|+. -..++.|+.++...
T Consensus 328 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~--~~l~s-~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 328 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK-------------HQSAVTCLQFNK--NFVIT-SSDDGTVKLWDLKT 391 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEEEECSTTS-------------CSSCEEEEEECS--SEEEE-EETTSEEEEEETTT
T ss_pred eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCC-------------CCCCEEEEEECC--CEEEE-EeCCCeEEEEECCC
Confidence 4566666556778888885 343 33322110 012345777753 34444 44568899999776
Q ss_pred CeE
Q 024317 191 EDC 193 (269)
Q Consensus 191 ~~~ 193 (269)
...
T Consensus 392 ~~~ 394 (445)
T 2ovr_B 392 GEF 394 (445)
T ss_dssp CCE
T ss_pred Cce
Confidence 543
No 288
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=78.80 E-value=8.5 Score=36.21 Aligned_cols=73 Identities=15% Similarity=0.125 Sum_probs=53.0
Q ss_pred CCcceEEEecCCCeEEEEeCCCCEEEEEecCC----------CCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCC
Q 024317 45 INPHSVIDRPGSSDLIVLDSSRSAFYTLSFPL----------SEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK 114 (269)
Q Consensus 45 ~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~----------~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~ 114 (269)
++|+|+-++|++.+++++.....++.++|..- ++...+.. .. ..=-.|.-.++|.+
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~a---e~-----------e~GlGPlHt~Fd~~ 388 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVG---EP-----------ELGLGPLHTTFDGR 388 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEE---CC-----------BCCSCEEEEEECSS
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEe---ec-----------cCCCcccEEEECCC
Confidence 58999999998889999999999999997530 11111111 10 01126888999999
Q ss_pred CCEEEEeCCCCEEEEEe
Q 024317 115 GNIYVADKSNHVIRKIT 131 (269)
Q Consensus 115 G~lyVaD~~n~~I~~~~ 131 (269)
|+.|.+=.-...|-+++
T Consensus 389 G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 389 GNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp SEEEEEETTTTEEEEEE
T ss_pred CceEeeeeecceEEEEe
Confidence 99999988777887766
No 289
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=75.97 E-value=18 Score=31.32 Aligned_cols=72 Identities=11% Similarity=-0.050 Sum_probs=48.3
Q ss_pred CCceEEEcC--------CCCEEEEeCCCCEEEEEeC-Ccc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEE
Q 024317 105 KPKSFAVDM--------KGNIYVADKSNHVIRKITN-LGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICAL 173 (269)
Q Consensus 105 ~P~giavd~--------~G~lyVaD~~n~~I~~~~~-~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~L 173 (269)
.-++|++.+ +|++.++=...+.|+..|. .+. ....+.. .....++++|++.++
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~----------------~~v~~v~~~p~~~~~ 201 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLS----------------SPGISVQFRPSNPNQ 201 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECS----------------SCEEEEEEETTEEEE
T ss_pred ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCC----------------CCcEEEEECCCCCce
Confidence 446788865 7788888777888888884 232 3332221 234689999975556
Q ss_pred EEEECCCCeEEEEECCCCe
Q 024317 174 LISDHGNQLIRQINLKPED 192 (269)
Q Consensus 174 yVaD~~n~~I~~~~~~~~~ 192 (269)
+++-..++.|+.++.....
T Consensus 202 l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 202 LIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEETTSEEEEEETTCCC
T ss_pred EEecCCCCEEEEEECCCCc
Confidence 6666667889999987653
No 290
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=75.85 E-value=50 Score=30.53 Aligned_cols=35 Identities=6% Similarity=-0.058 Sum_probs=24.0
Q ss_pred eEEEecCCCeEEEEeCC---------------CCEEEEEecCCCCCccEEEEE
Q 024317 49 SVIDRPGSSDLIVLDSS---------------RSAFYTLSFPLSEESVVKRLA 86 (269)
Q Consensus 49 giav~~~~g~lyV~D~~---------------~~~I~~~dl~~~~~g~~~~~~ 86 (269)
.+++++..+.+|+.... .+.|+.+|. .+|++....
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~---~tG~~~W~~ 288 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDL---DTGMAKWGY 288 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEET---TTCCEEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEec---CCCcEEEEe
Confidence 36787777899998642 136888984 567766544
No 291
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=74.21 E-value=58 Score=30.48 Aligned_cols=35 Identities=9% Similarity=-0.023 Sum_probs=24.7
Q ss_pred eEEEecCCCeEEEEeCCC---------------CEEEEEecCCCCCccEEEEE
Q 024317 49 SVIDRPGSSDLIVLDSSR---------------SAFYTLSFPLSEESVVKRLA 86 (269)
Q Consensus 49 giav~~~~g~lyV~D~~~---------------~~I~~~dl~~~~~g~~~~~~ 86 (269)
.+++++..+.+|+..... +.|+.+|. .+|++....
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~---~TG~~~W~~ 294 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDA---DTGEAKFGY 294 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEET---TTCCEEEEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeC---CCCceeeEe
Confidence 357777788999986542 47999984 578776544
No 292
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=73.57 E-value=37 Score=28.03 Aligned_cols=32 Identities=16% Similarity=-0.137 Sum_probs=19.2
Q ss_pred CceEEEcCCCCEEE-EeCC--------CCEEEEEeCCcc-eEEe
Q 024317 106 PKSFAVDMKGNIYV-ADKS--------NHVIRKITNLGV-TTIA 139 (269)
Q Consensus 106 P~giavd~~G~lyV-aD~~--------n~~I~~~~~~g~-~~~~ 139 (269)
...+++.++| +++ +... ..+|+.++ .+. ..+.
T Consensus 173 ~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~ 214 (347)
T 2gop_A 173 FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKMF 214 (347)
T ss_dssp TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEEE
T ss_pred cccccCCCCe-EEEEEecccccccccccccEEEeC-CCceEEec
Confidence 4567788888 544 4332 34788888 665 4443
No 293
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=72.83 E-value=39 Score=27.91 Aligned_cols=70 Identities=14% Similarity=0.019 Sum_probs=41.3
Q ss_pred cceEEEecC-CCeEEEEeCCCCEEEEEecCCCCCcc---EEEEEcCCcccCCCCCcccccCCCCceEEEcCC--CCEEEE
Q 024317 47 PHSVIDRPG-SSDLIVLDSSRSAFYTLSFPLSEESV---VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMK--GNIYVA 120 (269)
Q Consensus 47 P~giav~~~-~g~lyV~D~~~~~I~~~dl~~~~~g~---~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~--G~lyVa 120 (269)
-..+++.+. +++++++-+..+.|+.+|+. ++. ...+.+. -.....+++.++ |.++++
T Consensus 60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~---~~~~~~~~~~~~h--------------~~~V~~v~~~p~~~g~~las 122 (316)
T 3bg1_A 60 VWQVAWAHPMYGNILASCSYDRKVIIWREE---NGTWEKSHEHAGH--------------DSSVNSVCWAPHDYGLILAC 122 (316)
T ss_dssp EEEEEECCGGGSSCEEEEETTSCEEEECCS---SSCCCEEEEECCC--------------SSCCCEEEECCTTTCSCEEE
T ss_pred EEEEEeCCCCCCCEEEEEECCCEEEEEECC---CCcceEEEEccCC--------------CCceEEEEECCCCCCcEEEE
Confidence 356777432 36666666667778888752 332 2222111 124467888876 677776
Q ss_pred eCCCCEEEEEeCC
Q 024317 121 DKSNHVIRKITNL 133 (269)
Q Consensus 121 D~~n~~I~~~~~~ 133 (269)
-...+.|+.++..
T Consensus 123 gs~D~~i~lwd~~ 135 (316)
T 3bg1_A 123 GSSDGAISLLTYT 135 (316)
T ss_dssp ECSSSCEEEEEEC
T ss_pred EcCCCCEEEEecC
Confidence 6667778877743
No 294
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=72.25 E-value=47 Score=28.62 Aligned_cols=66 Identities=9% Similarity=0.061 Sum_probs=34.7
Q ss_pred ceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEE-EEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 48 HSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKR-LAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 48 ~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~-~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
..|++++ +|.++++-+..+.|..+|+ .+++... +.+. ...-.++..++.+.++-.....
T Consensus 151 ~sv~fsp-dg~~lasgs~Dg~v~iWd~---~~~~~~~~~~~h----------------~~~v~~~s~~~~~l~sgs~d~~ 210 (420)
T 4gga_A 151 SSVAWIK-EGNYLAVGTSSAEVQLWDV---QQQKRLRNMTSH----------------SARVGSLSWNSYILSSGSRSGH 210 (420)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEET---TTTEEEEEECCC----------------SSCEEEEEEETTEEEEEETTSE
T ss_pred EEEEECC-CCCEEEEEECCCeEEEEEc---CCCcEEEEEeCC----------------CCceEEEeeCCCEEEEEeCCCc
Confidence 5677765 5555555555667777764 3444332 2111 0111233345666666656667
Q ss_pred EEEEeCC
Q 024317 127 IRKITNL 133 (269)
Q Consensus 127 I~~~~~~ 133 (269)
++.++..
T Consensus 211 i~~~d~~ 217 (420)
T 4gga_A 211 IHHHDVR 217 (420)
T ss_dssp EEEEETT
T ss_pred eeEeeec
Confidence 7777644
No 295
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=71.50 E-value=67 Score=30.04 Aligned_cols=75 Identities=13% Similarity=0.141 Sum_probs=41.6
Q ss_pred ceEEEecCCCe----EEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC-
Q 024317 48 HSVIDRPGSSD----LIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK- 122 (269)
Q Consensus 48 ~giav~~~~g~----lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~- 122 (269)
.++++.+.++. ||+... .++++.+| ..+|++......+... ........|. + .+|.+||...
T Consensus 109 ~g~av~p~~g~~~~rV~v~t~-dg~l~AlD---a~TG~~~W~~~~~~~~-----~~~~~~ssP~---v-~~g~V~vg~~g 175 (599)
T 1w6s_A 109 RGLAYWPGDGKTPALILKTQL-DGNVAALN---AETGETVWKVENSDIK-----VGSTLTIAPY---V-VKDKVIIGSSG 175 (599)
T ss_dssp CCCEEECCCSSSCCEEEEECT-TSEEEEEE---TTTCCEEEEEECCCGG-----GTCBCCSCCE---E-ETTEEEECCBC
T ss_pred cceEEEecCCcceeEEEEEcC-CCEEEEEE---CCCCCEEEeecCCCCC-----ccceeecCCE---E-ECCEEEEEecc
Confidence 45677434566 988864 57888897 4678876554322100 0001122332 2 2567777653
Q ss_pred ----CCCEEEEEeC-Ccc
Q 024317 123 ----SNHVIRKITN-LGV 135 (269)
Q Consensus 123 ----~n~~I~~~~~-~g~ 135 (269)
..+.|+.+|. +|+
T Consensus 176 ~e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 176 AELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp GGGTCCCEEEEEETTTCC
T ss_pred cccCCCCeEEEEECCCCc
Confidence 2568888885 465
No 296
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=69.54 E-value=33 Score=32.55 Aligned_cols=107 Identities=9% Similarity=-0.015 Sum_probs=59.9
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEEEeCCc-c-eEEecCCCCCCCCCCCcccccccc-CceEEEEeCCCCEEEEEECC----
Q 024317 107 KSFAVDMKGNIYVADKSNHVIRKITNLG-V-TTIAGGGSKKEGRADGPAQNASFS-NDFELTFVPHICALLISDHG---- 179 (269)
Q Consensus 107 ~giavd~~G~lyVaD~~n~~I~~~~~~g-~-~~~~g~~~~~~~~~~~~~~~~~l~-~P~gia~~~~~g~LyVaD~~---- 179 (269)
..++..++|.+++++ .+.|+.++..+ . ..+....... .+. ..++++++|++..|+++-..
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~Spdg~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFD-----------EFGHSINDYSISPDGQFILLEYNYVKQW 86 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTT-----------TCCSCCCEEEECTTSSEEEEEEEEEECS
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhh-----------hhcccccceEECCCCCEEEEEECCeeeE
Confidence 368888899877777 67899999654 4 3332221100 011 23468889986666554421
Q ss_pred ----CCeEEEEECCCCeEEEecccCccCCCcccceeeeeccceee--EEEecCCcEEEEcC
Q 024317 180 ----NQLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVS--LVIGFVARPYIIRH 234 (269)
Q Consensus 180 ----n~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~g--ia~d~~g~lyVad~ 234 (269)
.+.++.++..++........ . +. ... .--.|.| ||...+++||+.+.
T Consensus 87 r~~~~~~~~~~d~~~~~~~~l~~~--~-~~----~~~-~~~SPdG~~la~~~~~~i~~~~~ 139 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLITEERI--P-NN----TQW-VTWSPVGHKLAYVWNNDIYVKIE 139 (740)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCC--C-TT----EEE-EEECSSTTCEEEEETTEEEEESS
T ss_pred EEccceEEEEEECCCCcEEEcccC--C-Cc----cee-eEECCCCCEEEEEECCeEEEEEC
Confidence 14567888887765433221 0 10 111 1123443 66667788888884
No 297
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=68.92 E-value=77 Score=29.71 Aligned_cols=114 Identities=8% Similarity=-0.064 Sum_probs=60.9
Q ss_pred ceEEEecCCCeEE-EEeCC-CC--EEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEeC
Q 024317 48 HSVIDRPGSSDLI-VLDSS-RS--AFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVADK 122 (269)
Q Consensus 48 ~giav~~~~g~ly-V~D~~-~~--~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD~ 122 (269)
.+++++|++..|. .++.. +. .|+.+|+ .+|+.....-.. . ...++++.++|. ||++-.
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~---~tg~~~~~~~~~-------------~-~~~~~~wspDg~~l~~~~~ 190 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKV---DGAKELPDVLER-------------V-KFSCMAWTHDGKGMFYNAY 190 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEET---TTTEEEEEEEEE-------------E-CSCCEEECTTSSEEEEEEC
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEEC---CCCCCCcccccC-------------c-ccceEEEEeCCCEEEEEEE
Confidence 3567876555554 33432 22 7888875 345544321100 0 134688988887 666543
Q ss_pred C---------------CCEEEEEeCCc-c--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEEC-C---C
Q 024317 123 S---------------NHVIRKITNLG-V--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDH-G---N 180 (269)
Q Consensus 123 ~---------------n~~I~~~~~~g-~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~-~---n 180 (269)
. ..+|++.+..+ . ..+....... -....++++++++..|+++-. . +
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~------------~~~~~~~~~SpDg~~l~~~~~~~~~~~ 258 (710)
T 2xdw_A 191 PQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE------------PKWMGGAELSDDGRYVLLSIREGCDPV 258 (710)
T ss_dssp CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC------------TTCEEEEEECTTSCEEEEEEECSSSSC
T ss_pred CCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC------------CeEEEEEEEcCCCCEEEEEEEccCCCc
Confidence 2 24577777543 2 1222111000 012357888998667766543 2 5
Q ss_pred CeEEEEECCC
Q 024317 181 QLIRQINLKP 190 (269)
Q Consensus 181 ~~I~~~~~~~ 190 (269)
..|+.++.++
T Consensus 259 ~~l~~~d~~~ 268 (710)
T 2xdw_A 259 NRLWYCDLQQ 268 (710)
T ss_dssp CEEEEEEGGG
T ss_pred cEEEEEECcc
Confidence 6899988764
No 298
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=62.58 E-value=17 Score=34.08 Aligned_cols=74 Identities=9% Similarity=-0.092 Sum_probs=45.6
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEEC------
Q 024317 107 KSFAVDMKGNIYVADKSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDH------ 178 (269)
Q Consensus 107 ~giavd~~G~lyVaD~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~------ 178 (269)
.++++.++|.++++. ..+.|++++.++. ..+...... .. .....++++|++..|+++..
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~-----------~~-~~~~~~~~SpDg~~la~~~~~~~~~~ 85 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTM-----------KS-VNASNYGLSPDRQFVYLESDYSKLWR 85 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHH-----------HT-TTCSEEEECTTSSEEEEEEEEEECSS
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccc-----------cc-cceeeEEECCCCCeEEEEecCceeEE
Confidence 467787888755555 4678888886553 333321100 00 12568999999666655532
Q ss_pred --CCCeEEEEECCCCeE
Q 024317 179 --GNQLIRQINLKPEDC 193 (269)
Q Consensus 179 --~n~~I~~~~~~~~~~ 193 (269)
..+.|+.++.+++..
T Consensus 86 ~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 86 YSYTATYYIYDLSNGEF 102 (719)
T ss_dssp SCEEEEEEEEETTTTEE
T ss_pred eecceEEEEEECCCCcc
Confidence 136799999887765
No 299
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=59.99 E-value=1.1e+02 Score=28.50 Aligned_cols=114 Identities=8% Similarity=-0.055 Sum_probs=58.5
Q ss_pred ceEEEecCCCeEEEEeCC------------CCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCC
Q 024317 48 HSVIDRPGSSDLIVLDSS------------RSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG 115 (269)
Q Consensus 48 ~giav~~~~g~lyV~D~~------------~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G 115 (269)
.+++++|++..|+.+... ..+|+++++..........+..... -..-.+++++++|
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~------------~~~~~~~~~SpDG 238 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD------------PTTFLQSDLSRDG 238 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC------------TTCEEEEEECTTS
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC------------CEEEEEEEECCCC
Confidence 578888765667666542 3568888763111111222211100 0122467888888
Q ss_pred C-EEEEe--C-CCCEEEEEeCC-cc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEEC---CCCeEEEE
Q 024317 116 N-IYVAD--K-SNHVIRKITNL-GV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDH---GNQLIRQI 186 (269)
Q Consensus 116 ~-lyVaD--~-~n~~I~~~~~~-g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~---~n~~I~~~ 186 (269)
. |+++- . .+..|+.++.. +. ..+..... .....+ .++++ +|+.-. .+.+|+++
T Consensus 239 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~----------------~~~~~~-~~~g~-l~~~s~~~~~~~~l~~~ 300 (695)
T 2bkl_A 239 KYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG----------------AKYEVH-AWKDR-FYVLTDEGAPRQRVFEV 300 (695)
T ss_dssp CCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS----------------CCEEEE-EETTE-EEEEECTTCTTCEEEEE
T ss_pred CEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC----------------ceEEEE-ecCCc-EEEEECCCCCCCEEEEE
Confidence 7 44432 2 24477777653 44 55543211 112222 24434 766543 36789999
Q ss_pred ECCCC
Q 024317 187 NLKPE 191 (269)
Q Consensus 187 ~~~~~ 191 (269)
+.++.
T Consensus 301 d~~~~ 305 (695)
T 2bkl_A 301 DPAKP 305 (695)
T ss_dssp BTTBC
T ss_pred eCCCC
Confidence 87654
No 300
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=59.99 E-value=1.1e+02 Score=28.57 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=57.3
Q ss_pred eEEEecCCCeEEEEeC---CCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCC-CEEEE-eC-
Q 024317 49 SVIDRPGSSDLIVLDS---SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKG-NIYVA-DK- 122 (269)
Q Consensus 49 giav~~~~g~lyV~D~---~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G-~lyVa-D~- 122 (269)
++.+++++..|+++.. ..+.|+.+|+. +.++.+..+.... ..-... ++++| .|||. +.
T Consensus 238 ~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~-~~~~~~~~l~~~~--------------~~~~~~-~~~~g~~l~~~t~~~ 301 (693)
T 3iuj_A 238 GATVTEDDRFLLISAANSTSGNRLYVKDLS-QENAPLLTVQGDL--------------DADVSL-VDNKGSTLYLLTNRD 301 (693)
T ss_dssp EEEECTTSCEEEEEEESSSSCCEEEEEETT-STTCCCEEEECSS--------------SSCEEE-EEEETTEEEEEECTT
T ss_pred EEEEcCCCCEEEEEEccCCCCcEEEEEECC-CCCCceEEEeCCC--------------CceEEE-EeccCCEEEEEECCC
Confidence 5667765555655432 23578888763 2333455443221 011111 33444 45554 33
Q ss_pred -CCCEEEEEeCCcc-----eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCC--eEEEEECCCCeEE
Q 024317 123 -SNHVIRKITNLGV-----TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQ--LIRQINLKPEDCS 194 (269)
Q Consensus 123 -~n~~I~~~~~~g~-----~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~--~I~~~~~~~~~~~ 194 (269)
.+.+|.+++.++. ..+..... ... .++++++.|+++-..++ +|+.++.+++...
T Consensus 302 ~~~~~l~~~d~~~~~~~~~~~l~~~~~---------------~~~---~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~ 363 (693)
T 3iuj_A 302 APNRRLVTVDAANPGPAHWRDLIPERQ---------------QVL---TVHSGSGYLFAEYMVDATARVEQFDYEGKRVR 363 (693)
T ss_dssp CTTCEEEEEETTSCCGGGCEEEECCCS---------------SCE---EEEEETTEEEEEEEETTEEEEEEECTTSCEEE
T ss_pred CCCCEEEEEeCCCCCccccEEEecCCC---------------CEE---EEEEECCEEEEEEEECCeeEEEEEECCCCeeE
Confidence 2578888886542 33333210 111 34455467766654443 6888888876554
Q ss_pred Ee
Q 024317 195 KS 196 (269)
Q Consensus 195 ~~ 196 (269)
..
T Consensus 364 ~l 365 (693)
T 3iuj_A 364 EV 365 (693)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 301
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=58.20 E-value=70 Score=25.60 Aligned_cols=102 Identities=13% Similarity=0.040 Sum_probs=57.3
Q ss_pred ceEEEcCCCC-EE-E-EeCCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEE-CCC
Q 024317 107 KSFAVDMKGN-IY-V-ADKSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISD-HGN 180 (269)
Q Consensus 107 ~giavd~~G~-ly-V-aD~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD-~~n 180 (269)
..++..+.+. ++ + +....+.|+.++.... ...... ......+++.+....++++- ...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~~~sg~~d 263 (318)
T 4ggc_A 200 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA----------------HSQVCSILWSPHYKELISGHGFAQ 263 (318)
T ss_dssp EEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC----------------SSCEEEEEEETTTTEEEEEECTTT
T ss_pred EEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccc----------------eeeeeeeeecccccceEEEEEcCC
Confidence 4456655433 33 3 3345567888876544 221111 22346777888867777654 356
Q ss_pred CeEEEEECCCCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEc-CCCCc
Q 024317 181 QLIRQINLKPEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIR-HTGRL 238 (269)
Q Consensus 181 ~~I~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad-~~g~~ 238 (269)
+.|+.++.........-.. .-.....+++.++|.+.++- .+|.+
T Consensus 264 ~~i~iwd~~~~~~~~~l~g--------------H~~~V~~l~~spdg~~l~S~s~D~~v 308 (318)
T 4ggc_A 264 NQLVIWKYPTMAKVAELKG--------------HTSRVLSLTMSPDGATVASAAADETL 308 (318)
T ss_dssp CCEEEEETTTCCEEEEECC--------------CSSCEEEEEECTTSSCEEEEETTTEE
T ss_pred CEEEEEECCCCcEEEEEcC--------------CCCCEEEEEEcCCCCEEEEEecCCeE
Confidence 7899999876544332211 11335678899999655543 44433
No 302
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=57.52 E-value=72 Score=25.52 Aligned_cols=106 Identities=12% Similarity=0.099 Sum_probs=55.9
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEE-EEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCC
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKR-LAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNH 125 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~-~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~ 125 (269)
-..+++++ +++.+++-+..+.|..+++ .+++... +.+. ...-.++..++.+.++-....
T Consensus 70 V~~v~~~~-~~~~l~sgs~Dg~v~iw~~---~~~~~~~~~~~h----------------~~~~~~~~~~~~~l~s~~~~~ 129 (318)
T 4ggc_A 70 ISSVAWIK-EGNYLAVGTSSAEVQLWDV---QQQKRLRNMTSH----------------SARVGSLSWNSYILSSGSRSG 129 (318)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEET---TTTEEEEEEECC----------------SSCEEEEEEETTEEEEEETTS
T ss_pred EEEEEECC-CCCEEEEEECCCcEEEeec---CCceeEEEecCc----------------cceEEEeecCCCEEEEEecCC
Confidence 35788865 6666666667788888875 3454333 3221 111233444556555555566
Q ss_pred EEEEEeCCcc----eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECC
Q 024317 126 VIRKITNLGV----TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 126 ~I~~~~~~g~----~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~ 189 (269)
.++..+.... ..+.+. ......+++.++ +.++++-...+.|+.++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~-~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 130 HIHHHDVRVAEHHVATLSGH----------------SQEVCGLRWAPD-GRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEEEETTSSSCEEEEEECC----------------SSCEEEEEECTT-SSEEEEEETTSCEEEEESS
T ss_pred ceEeeecCCCceeEEEEcCc----------------cCceEEEEEcCC-CCEEEEEecCcceeEEECC
Confidence 6666654332 222221 123445666665 4444444445667776654
No 303
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=56.86 E-value=80 Score=27.75 Aligned_cols=79 Identities=4% Similarity=-0.130 Sum_probs=39.4
Q ss_pred CCCCcceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeC
Q 024317 43 LEINPHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADK 122 (269)
Q Consensus 43 ~~~~P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~ 122 (269)
.+....-+++++..|-++.+.. ..+..+++. +.+ .........+. ......+..+..|++ .+..|+|+
T Consensus 36 ~~~~~nlLais~~~gll~a~~~--~~l~v~~~~---~l~--~~~~~~~~~~~--~~~~~~lp~V~~l~f-d~~~L~v~-- 103 (388)
T 1xip_A 36 PFASLQNLDISNSKSLFVAASG--SKAVVGELQ---LLR--DHITSDSTPLT--FKWEKEIPDVIFVCF-HGDQVLVS-- 103 (388)
T ss_dssp CSSCCBCEEEETTTTEEEEEET--TEEEEEEHH---HHH--HHHHSSSCCCC--CSEEEECTTEEEEEE-ETTEEEEE--
T ss_pred CcccccEEEEcCCCCEEEEeCC--CEEEEEEhh---Hhh--hhhcccccccc--ceEEeeCCCeeEEEE-CCCEEEEE--
Confidence 3445677899876666665553 455556531 110 00000000000 001112334788999 33448888
Q ss_pred CCCEEEEEeCC
Q 024317 123 SNHVIRKITNL 133 (269)
Q Consensus 123 ~n~~I~~~~~~ 133 (269)
.++.|+.++-.
T Consensus 104 ~~~~l~v~dv~ 114 (388)
T 1xip_A 104 TRNALYSLDLE 114 (388)
T ss_dssp ESSEEEEEESS
T ss_pred cCCcEEEEEch
Confidence 45789999853
No 304
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=56.52 E-value=1.3e+02 Score=28.12 Aligned_cols=68 Identities=6% Similarity=0.089 Sum_probs=39.6
Q ss_pred ceEEEcCCCC-EEEE-eCC---CCEEEEEeCC-------c--c-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCC
Q 024317 107 KSFAVDMKGN-IYVA-DKS---NHVIRKITNL-------G--V-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHIC 171 (269)
Q Consensus 107 ~giavd~~G~-lyVa-D~~---n~~I~~~~~~-------g--~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g 171 (269)
.+++++++|. |+++ ... +..|+.++.+ + . ..+..... .-.. .++++++
T Consensus 236 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~----------------~~~~-~~s~dg~ 298 (710)
T 2xdw_A 236 GGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE----------------GEYD-YVTNEGT 298 (710)
T ss_dssp EEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS----------------SCEE-EEEEETT
T ss_pred EEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC----------------cEEE-EEeccCC
Confidence 5788989998 4443 222 5688888854 3 3 44433210 0111 3466667
Q ss_pred EEEEEECC---CCeEEEEECCCC
Q 024317 172 ALLISDHG---NQLIRQINLKPE 191 (269)
Q Consensus 172 ~LyVaD~~---n~~I~~~~~~~~ 191 (269)
.||+.-.. +.+|++++.++.
T Consensus 299 ~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 299 VFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp EEEEEECTTCTTCEEEEEETTSC
T ss_pred EEEEEECCCCCCCEEEEEeCCCC
Confidence 78776542 457999988764
No 305
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=54.11 E-value=96 Score=25.93 Aligned_cols=65 Identities=8% Similarity=0.014 Sum_probs=36.6
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeE
Q 024317 107 KSFAVDMKGNIYVADKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLI 183 (269)
Q Consensus 107 ~giavd~~G~lyVaD~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I 183 (269)
.++++++++.+|++... +.+++-+.. |. ..+. .+. -.....++++++ +.+|++-. ++.+
T Consensus 166 ~~~~~~~~~~~~~~g~~-G~~~~S~d~gG~tW~~~~-~~~--------------~~~~~~~~~~~~-g~~~~~~~-~G~~ 227 (327)
T 2xbg_A 166 RNLNRSPSGEYVAVSSR-GSFYSTWEPGQTAWEPHN-RTT--------------SRRLHNMGFTPD-GRLWMIVN-GGKI 227 (327)
T ss_dssp EEEEECTTSCEEEEETT-SSEEEEECTTCSSCEEEE-CCS--------------SSCEEEEEECTT-SCEEEEET-TTEE
T ss_pred EEEEEcCCCcEEEEECC-CcEEEEeCCCCCceeECC-CCC--------------CCccceeEECCC-CCEEEEeC-CceE
Confidence 56888888888876653 344444332 44 3332 110 123467888776 78887765 3556
Q ss_pred EEEECC
Q 024317 184 RQINLK 189 (269)
Q Consensus 184 ~~~~~~ 189 (269)
++-+.+
T Consensus 228 ~~s~~D 233 (327)
T 2xbg_A 228 AFSDPD 233 (327)
T ss_dssp EEEETT
T ss_pred EEecCC
Confidence 554344
No 306
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=53.55 E-value=1.1e+02 Score=26.58 Aligned_cols=58 Identities=12% Similarity=0.032 Sum_probs=35.1
Q ss_pred CCCEEEEeCCCCEEEEEeC-Ccc--eEEecCCCCCCCCCCCccccccccCce-EEEEeCCCCEEEEEECCCCeEEEEEC
Q 024317 114 KGNIYVADKSNHVIRKITN-LGV--TTIAGGGSKKEGRADGPAQNASFSNDF-ELTFVPHICALLISDHGNQLIRQINL 188 (269)
Q Consensus 114 ~G~lyVaD~~n~~I~~~~~-~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~-gia~~~~~g~LyVaD~~n~~I~~~~~ 188 (269)
++.+.++=...+.|+..|. .|+ .++.+. -..+. .++++|+ |..+++-...+.|+.++.
T Consensus 294 sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH----------------~~~vvs~vafSPD-G~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 294 KDHCAAAILTSGTIAIWDLLLGQCTALLPPV----------------SDQHWSFVKWSGT-DSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ETTEEEEEETTSCEEEEETTTCSEEEEECCC------------------CCCCEEEECSS-SSEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEecCC----------------CCCeEEEEEECCC-CCEEEEEECCCcEEEecC
Confidence 3555666445567777774 344 344332 11233 5899998 666667677788888763
No 307
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=52.85 E-value=68 Score=28.10 Aligned_cols=69 Identities=14% Similarity=0.085 Sum_probs=48.7
Q ss_pred CeEEEEeCCCC--EEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCc-eEEEcCCCCEEEEeCCCCEEEEEeCC
Q 024317 57 SDLIVLDSSRS--AFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPK-SFAVDMKGNIYVADKSNHVIRKITNL 133 (269)
Q Consensus 57 g~lyV~D~~~~--~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~-giavd~~G~lyVaD~~n~~I~~~~~~ 133 (269)
..||.-+...+ .|..+|+ .++++...+.--..| ......+. ++-+..++.||+++....+|..++..
T Consensus 40 ~yL~~~N~~~~~~~i~~iDL---~~~kl~k~i~~ekEG-------PNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~ 109 (369)
T 3s9j_A 40 EYLHFENTQKSLYDIVIFDI---ENQQIAKRIPLHKTG-------PNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQ 109 (369)
T ss_dssp EEEEEEECSTTCCEEEEEET---TTTEEEEEEECBSSS-------TTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTT
T ss_pred EEEEEeCCCCCcCcEEEEEC---CCCceeeeeccccCC-------CCCcccceeeEEecCCCEEEEEeCCcceEEEECCC
Confidence 36777888878 9999997 466665443221111 12233563 57777788999999988899999999
Q ss_pred cc
Q 024317 134 GV 135 (269)
Q Consensus 134 g~ 135 (269)
|.
T Consensus 110 G~ 111 (369)
T 3s9j_A 110 GE 111 (369)
T ss_dssp CC
T ss_pred ce
Confidence 97
No 308
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=50.90 E-value=1.5e+02 Score=27.22 Aligned_cols=72 Identities=11% Similarity=0.147 Sum_probs=42.4
Q ss_pred eEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCC-----
Q 024317 49 SVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKS----- 123 (269)
Q Consensus 49 giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~----- 123 (269)
++++ .++.|||... .++++.+| ..+|++......+.... .......| ++ .+|.+||....
T Consensus 110 ~~~~--~~~~v~v~~~-dg~l~alD---~~tG~~~W~~~~~~~~~-----~~~~~~~P---~v-~~g~v~vg~~~~~~~~ 174 (571)
T 2ad6_A 110 GLAY--GAGQIVKKQA-NGHLLALD---AKTGKINWEVEVCDPKV-----GSTLTQAP---FV-AKDTVLMGCSGAELGV 174 (571)
T ss_dssp CCEE--ETTEEEEECT-TSEEEEEE---TTTCCEEEEEECCCGGG-----TCBCCSCC---EE-ETTEEEEECBCGGGTC
T ss_pred ccEE--ECCEEEEEeC-CCEEEEEE---CCCCCEEEEecCCCCCc-----cceeccCC---EE-ECCEEEEEecCCccCC
Confidence 4677 3789999864 57899998 36787765443211000 00111223 22 25778887653
Q ss_pred CCEEEEEeC-Ccc
Q 024317 124 NHVIRKITN-LGV 135 (269)
Q Consensus 124 n~~I~~~~~-~g~ 135 (269)
.+.|..+|. +|+
T Consensus 175 ~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 175 RGAVNAFDLKTGE 187 (571)
T ss_dssp CCEEEEEETTTCC
T ss_pred CCEEEEEECCCCc
Confidence 578999986 465
No 309
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=49.61 E-value=1.7e+02 Score=27.48 Aligned_cols=35 Identities=11% Similarity=-0.005 Sum_probs=24.3
Q ss_pred eEEEecCCCeEEEEeCCC------------------CEEEEEecCCCCCccEEEEE
Q 024317 49 SVIDRPGSSDLIVLDSSR------------------SAFYTLSFPLSEESVVKRLA 86 (269)
Q Consensus 49 giav~~~~g~lyV~D~~~------------------~~I~~~dl~~~~~g~~~~~~ 86 (269)
.+++++..+.||+..... ..|+.+|. .+|++....
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~---~TG~~~W~~ 299 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDP---DTGKYKWHY 299 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECT---TTCCEEEEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEEC---CCCCEEEEE
Confidence 578887788899886432 25888874 578766654
No 310
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=49.29 E-value=1.2e+02 Score=25.42 Aligned_cols=102 Identities=10% Similarity=0.064 Sum_probs=51.5
Q ss_pred CceEEEcCCCCEEEEeCCCCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeE
Q 024317 106 PKSFAVDMKGNIYVADKSNHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLI 183 (269)
Q Consensus 106 P~giavd~~G~lyVaD~~n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I 183 (269)
+..|++..++.+|++-. .+.|++-+-.|. ..+... . -....+++++++ +.+|+.... +.+
T Consensus 124 ~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~-~--------------~~~~~~~~~~~~-~~~~~~g~~-G~~ 185 (327)
T 2xbg_A 124 PRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALVQE-A--------------IGVMRNLNRSPS-GEYVAVSSR-GSF 185 (327)
T ss_dssp EEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEECS-C--------------CCCEEEEEECTT-SCEEEEETT-SSE
T ss_pred eEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEeecC-C--------------CcceEEEEEcCC-CcEEEEECC-CcE
Confidence 45677767788887764 345555443454 333221 0 012357787776 666665543 345
Q ss_pred EEEECC-CCeEEEecccCccCCCcccceeeeeccceeeEEEecCCcEEEEcCCCCcc
Q 024317 184 RQINLK-PEDCSKSSQSGSALGAVSVWVLVSVLSCLVSLVIGFVARPYIIRHTGRLD 239 (269)
Q Consensus 184 ~~~~~~-~~~~~~~~~~g~~~g~~~~~~~~~~l~~p~gia~d~~g~lyVad~~g~~~ 239 (269)
++-+.. +..-...... . -.....+++++++++|++...|.++
T Consensus 186 ~~S~d~gG~tW~~~~~~---~-----------~~~~~~~~~~~~g~~~~~~~~G~~~ 228 (327)
T 2xbg_A 186 YSTWEPGQTAWEPHNRT---T-----------SRRLHNMGFTPDGRLWMIVNGGKIA 228 (327)
T ss_dssp EEEECTTCSSCEEEECC---S-----------SSCEEEEEECTTSCEEEEETTTEEE
T ss_pred EEEeCCCCCceeECCCC---C-----------CCccceeEECCCCCEEEEeCCceEE
Confidence 554432 2221111111 0 0224556667777777766555443
No 311
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=47.63 E-value=1.8e+02 Score=27.09 Aligned_cols=72 Identities=14% Similarity=0.049 Sum_probs=42.1
Q ss_pred ceEEEcCCCC--EEEEeCC---CCEEEEEeCCcceEE-ecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECC-
Q 024317 107 KSFAVDMKGN--IYVADKS---NHVIRKITNLGVTTI-AGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHG- 179 (269)
Q Consensus 107 ~giavd~~G~--lyVaD~~---n~~I~~~~~~g~~~~-~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~- 179 (269)
.++++.++|. .|..+.. ...|++++.++.... ... . .. .. -.+++.+|++..|+.+...
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~--~---------~~--~~-~~~~~wspDg~~l~~~~~d~ 189 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV--I---------EG--GK-YATPKWTPDSKGFYYEWLPT 189 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC--B---------SC--CT-TCCCEECTTSSEEEEEECCC
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc--c---------Cc--cc-ccceEEecCCCEEEEEEecC
Confidence 5688889998 4555532 268889987654111 100 0 00 00 1568888886667666542
Q ss_pred -----------CCeEEEEECCCCe
Q 024317 180 -----------NQLIRQINLKPED 192 (269)
Q Consensus 180 -----------n~~I~~~~~~~~~ 192 (269)
..+|++++..+..
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCG
T ss_pred CCCCccccCCCCCEEEEEECCCCc
Confidence 3458888877543
No 312
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=45.94 E-value=2e+02 Score=27.13 Aligned_cols=27 Identities=4% Similarity=0.023 Sum_probs=18.3
Q ss_pred eEEEcCCCCEEEEeCCCCEEEEEeC-Ccc
Q 024317 108 SFAVDMKGNIYVADKSNHVIRKITN-LGV 135 (269)
Q Consensus 108 giavd~~G~lyVaD~~n~~I~~~~~-~g~ 135 (269)
+......|.+|++ ...+.++.+|. +|+
T Consensus 480 g~~~tagglvf~g-t~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 480 GTLSTAGNLVFEG-SADGRVIAYAADTGE 507 (689)
T ss_dssp CEEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred ccceECCCEEEEE-CCCCcEEEEECCCCc
Confidence 4444456667777 45789999995 465
No 313
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=43.81 E-value=1.7e+02 Score=25.67 Aligned_cols=105 Identities=10% Similarity=0.042 Sum_probs=56.5
Q ss_pred cceEEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEEEcCCcccCCCCCcccccCCCCceEEEcCCCCEEEEeCCCCE
Q 024317 47 PHSVIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGNIYVADKSNHV 126 (269)
Q Consensus 47 P~giav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~lyVaD~~n~~ 126 (269)
++.|++ ++..|+|+ .++.|..+|...-..+........+ ...-.+..|+-.+++.+|.|++.|-.+..
T Consensus 90 V~~l~f--d~~~L~v~--~~~~l~v~dv~sl~~~~~~~~~~~~--------v~~i~~~~p~~av~~~dG~L~v~dl~~~~ 157 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS--TRNALYSLDLEELSEFRTVTSFEKP--------VFQLKNVNNTLVILNSVNDLSALDLRTKS 157 (388)
T ss_dssp EEEEEE--ETTEEEEE--ESSEEEEEESSSTTCEEEEEECSSC--------EEEEEECSSEEEEEETTSEEEEEETTTCC
T ss_pred eeEEEE--CCCEEEEE--cCCcEEEEEchhhhccCccceeecc--------eeeEEecCCCEEEEECCCCEEEEEccCCc
Confidence 788888 47888998 4578999985311222211111000 01112334443444456777777654332
Q ss_pred EEEEeCCcceEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Q 024317 127 IRKITNLGVTTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLIRQINLKPEDC 193 (269)
Q Consensus 127 I~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I~~~~~~~~~~ 193 (269)
.. ... ....+++.+++ | +++.- .++.|+.+++++..+
T Consensus 158 ~~--------~~~-------------------~~Vs~v~WSpk-G-~~vg~-~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 158 TK--------QLA-------------------QNVTSFDVTNS-Q-LAVLL-KDRSFQSFAWRNGEM 194 (388)
T ss_dssp EE--------EEE-------------------ESEEEEEECSS-E-EEEEE-TTSCEEEEEEETTEE
T ss_pred cc--------ccc-------------------CCceEEEEcCC-c-eEEEE-cCCcEEEEcCCCccc
Confidence 21 111 13457888886 5 44433 356788888777663
No 314
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=39.08 E-value=2.4e+02 Score=26.24 Aligned_cols=26 Identities=8% Similarity=0.156 Sum_probs=15.0
Q ss_pred EEcCCCC-EEEEeC--CCCEEEEEeCCcc
Q 024317 110 AVDMKGN-IYVADK--SNHVIRKITNLGV 135 (269)
Q Consensus 110 avd~~G~-lyVaD~--~n~~I~~~~~~g~ 135 (269)
.++++++ |+++-. +..+|++++.+|.
T Consensus 332 ~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred EEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 4444555 544433 2347888888776
No 315
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=38.47 E-value=2e+02 Score=25.02 Aligned_cols=72 Identities=11% Similarity=-0.053 Sum_probs=44.5
Q ss_pred eEEEcC---CCCEEEEeCCCCEEEEEeCC-cc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEE-----
Q 024317 108 SFAVDM---KGNIYVADKSNHVIRKITNL-GV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLIS----- 176 (269)
Q Consensus 108 giavd~---~G~lyVaD~~n~~I~~~~~~-g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVa----- 176 (269)
.+++.+ ++.++++-...+.|+..|.. |+ .++.+.... ......++++|+ +.++++
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~-------------v~~v~~vafSpd-G~~lvs~s~~~ 248 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSY-------------QASVCHKAYSEM-GLLFIVLSHPC 248 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC----------------CCCEEEEEEET-TEEEEEEC---
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcc-------------eeeeEEEEECCC-CCEEEEeccCC
Confidence 456666 66899998888999999965 65 555432110 123456788886 665543
Q ss_pred -------ECCCCeEEEEECCCCeE
Q 024317 177 -------DHGNQLIRQINLKPEDC 193 (269)
Q Consensus 177 -------D~~n~~I~~~~~~~~~~ 193 (269)
-...+.|+.++...+..
T Consensus 249 ~~w~laSGs~D~tIklWd~~tgk~ 272 (356)
T 2w18_A 249 AKESESLRSPVFQLIVINPKTTLS 272 (356)
T ss_dssp ---------CCEEEEEEETTTTEE
T ss_pred CcceeeccCCCcEEEEEECCCCEE
Confidence 22345677777776644
No 316
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=37.08 E-value=2.7e+02 Score=26.12 Aligned_cols=115 Identities=14% Similarity=0.107 Sum_probs=57.5
Q ss_pred ceEEEecCCCeEEEEeC----CCCEEEEEecCCCCCcc-EEEEEcCCcccCCCCCcccccCCCCceEEEcCCCC-EEEEe
Q 024317 48 HSVIDRPGSSDLIVLDS----SRSAFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPGSARFDKPKSFAVDMKGN-IYVAD 121 (269)
Q Consensus 48 ~giav~~~~g~lyV~D~----~~~~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~~~~~~~P~giavd~~G~-lyVaD 121 (269)
.++.+++++..|+++-. .+..|+.+|+. +.++. ...+.... ..-... +.++|. ||+.-
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~--------------~~~~~~-~~~dg~~l~~~s 334 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVT-NGKIGPVTALIPDL--------------KAQWDF-VDGVGDQLWFVS 334 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEE-TTEECCCEEEECSS--------------SSCEEE-EEEETTEEEEEE
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECC-CCCCcccEEecCCC--------------CceEEE-EeccCCEEEEEE
Confidence 46778764445555442 35688888752 11113 44443221 011112 235555 55543
Q ss_pred -C--CCCEEEEEeCCc---c-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCC--CeEEEEECCCCe
Q 024317 122 -K--SNHVIRKITNLG---V-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGN--QLIRQINLKPED 192 (269)
Q Consensus 122 -~--~n~~I~~~~~~g---~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n--~~I~~~~~~~~~ 192 (269)
. .+.+|.+++.++ . ..+..... ....+++++ ++.|+++-..+ .+|+.++.+++.
T Consensus 335 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~---------------~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~ 397 (741)
T 1yr2_A 335 GDGAPLKKIVRVDLSGSTPRFDTVVPESK---------------DNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKP 397 (741)
T ss_dssp CTTCTTCEEEEEECSSSSCEEEEEECCCS---------------SEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCE
T ss_pred CCCCCCCEEEEEeCCCCccccEEEecCCC---------------CeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCc
Confidence 2 367888888654 3 33332110 112456666 26777665433 467777876664
Q ss_pred EEE
Q 024317 193 CSK 195 (269)
Q Consensus 193 ~~~ 195 (269)
...
T Consensus 398 ~~~ 400 (741)
T 1yr2_A 398 AGA 400 (741)
T ss_dssp EEE
T ss_pred eee
Confidence 433
No 317
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=35.12 E-value=2.7e+02 Score=25.59 Aligned_cols=111 Identities=5% Similarity=-0.049 Sum_probs=0.0
Q ss_pred eEEEecCCCeEEEEeC--------------------------------CCCEEEEEecCCCCCccEEEEEcCCcccCCCC
Q 024317 49 SVIDRPGSSDLIVLDS--------------------------------SRSAFYTLSFPLSEESVVKRLAGDGVQGYSDG 96 (269)
Q Consensus 49 giav~~~~g~lyV~D~--------------------------------~~~~I~~~dl~~~~~g~~~~~~g~g~~g~~dg 96 (269)
+++++|..+.+|+... ..+.|+.+| -.+|++....
T Consensus 416 ~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D---~~tG~~~W~~---------- 482 (582)
T 1flg_A 416 PMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMD---PVSGKVVWEH---------- 482 (582)
T ss_dssp CCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEEC---TTTCCEEEEE----------
T ss_pred CceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEE---CCCCCEEEEe----------
Q ss_pred CcccccCCCCceEEEcCCCCEEEEeCCCCEEEEEe-CCcceEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEE
Q 024317 97 EPGSARFDKPKSFAVDMKGNIYVADKSNHVIRKIT-NLGVTTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLI 175 (269)
Q Consensus 97 ~~~~~~~~~P~giavd~~G~lyVaD~~n~~I~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyV 175 (269)
......-.+..+...|.+|+.+. .+.++.+| .+|+..+-...... ....-+++..+ |.+||
T Consensus 483 ---~~~~~~~~g~~~tagglvf~g~~-dg~l~A~D~~tG~~lW~~~~~~g-------------~~a~P~~y~~~-G~qYv 544 (582)
T 1flg_A 483 ---KEHLPLWAGVLATAGNLVFTGTG-DGYFKAFDAKSGKELWKFQTGSG-------------IVSPPITWEQD-GEQYL 544 (582)
T ss_dssp ---EESSCCCSCCEEETTTEEEEECT-TSEEEEEETTTCCEEEEEECSSC-------------CCSCCEEEEET-TEEEE
T ss_pred ---cCCCCCcccceEeCCCEEEEECC-CCcEEEEECCCCCEEEEecCCCC-------------cccCceEEEEC-CEEEE
Q ss_pred EECCC----------------------CeEEEEECCC
Q 024317 176 SDHGN----------------------QLIRQINLKP 190 (269)
Q Consensus 176 aD~~n----------------------~~I~~~~~~~ 190 (269)
+-... ++|+.|.+..
T Consensus 545 ~~~~G~gg~~~~~~~~~~~~~~~~~~g~~~~~f~l~~ 581 (582)
T 1flg_A 545 GVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPS 581 (582)
T ss_dssp EEEECCCSHHHHHCTHHHHHHTTCCCCCEEEEEECCC
T ss_pred EEEccCCCcccccccccccccccCCCCCEEEEEeCCC
No 318
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=32.67 E-value=2.3e+02 Score=24.12 Aligned_cols=67 Identities=13% Similarity=0.232 Sum_probs=36.4
Q ss_pred ceEEEcCCCCEEEEeCCCCEEEEEeCCcc---eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCeE
Q 024317 107 KSFAVDMKGNIYVADKSNHVIRKITNLGV---TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQLI 183 (269)
Q Consensus 107 ~giavd~~G~lyVaD~~n~~I~~~~~~g~---~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~I 183 (269)
..+++ +|+++++-..++.|+.++.... ..+.+. -.....+++ ++..|+++.. ++.|
T Consensus 243 ~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----------------~~~v~~~~~--~~~~l~~~~~-d~~i 301 (445)
T 2ovr_B 243 RCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH----------------TNRVYSLQF--DGIHVVSGSL-DTSI 301 (445)
T ss_dssp EEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCC----------------SSCEEEEEE--CSSEEEEEET-TSCE
T ss_pred EEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCC----------------CCceEEEEE--CCCEEEEEeC-CCeE
Confidence 44555 4554444445677888875432 222221 122356666 3245555554 5779
Q ss_pred EEEECCCCeEE
Q 024317 184 RQINLKPEDCS 194 (269)
Q Consensus 184 ~~~~~~~~~~~ 194 (269)
+.++.......
T Consensus 302 ~i~d~~~~~~~ 312 (445)
T 2ovr_B 302 RVWDVETGNCI 312 (445)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCCEE
Confidence 99987665443
No 319
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=30.45 E-value=3.4e+02 Score=25.32 Aligned_cols=28 Identities=7% Similarity=0.061 Sum_probs=18.4
Q ss_pred CCeEEEEeCC-----CCEEEEEecCCCCCccEEEEE
Q 024317 56 SSDLIVLDSS-----RSAFYTLSFPLSEESVVKRLA 86 (269)
Q Consensus 56 ~g~lyV~D~~-----~~~I~~~dl~~~~~g~~~~~~ 86 (269)
++.+||...+ .+.|+.+|. .+|+.....
T Consensus 162 ~~~v~vg~~~~~~~~~g~v~a~D~---~tG~~~W~~ 194 (668)
T 1kv9_A 162 KGKVIIGNGGAEYGVRGFVSAYDA---DTGKLAWRF 194 (668)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEET---TTCCEEEEE
T ss_pred CCEEEEeCCCCCcCCCCEEEEEEC---CCCcEEEEe
Confidence 5788887543 467888873 567765543
No 320
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=30.34 E-value=2.5e+02 Score=23.80 Aligned_cols=138 Identities=10% Similarity=0.121 Sum_probs=62.3
Q ss_pred CcceEEEec-CCCeEEEEeCCCC---EEEEEecCCCCCcc-EEEEEcCCcccCCCCCcc--cccCCCCceEEEcC---CC
Q 024317 46 NPHSVIDRP-GSSDLIVLDSSRS---AFYTLSFPLSEESV-VKRLAGDGVQGYSDGEPG--SARFDKPKSFAVDM---KG 115 (269)
Q Consensus 46 ~P~giav~~-~~g~lyV~D~~~~---~I~~~dl~~~~~g~-~~~~~g~g~~g~~dg~~~--~~~~~~P~giavd~---~G 115 (269)
....|++++ ..+.||++-...+ .|++. +..|+ ...+. .. .++...... ...+..-..|++++ .+
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s----~D~G~tW~~~~-~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~ 129 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTGHLGPTVFRS----DDGGGNWTEAT-RP-PAFNKAPEGETGRVVDHVFWLTPGHASEPG 129 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC--CCEEEEEE----SSTTSCCEECS-BC-CCCCCCC----CCCCCEEEEEEECCTTSTT
T ss_pred ceEEEEECCCCCCeEEEEecCCCCCccEEEe----CCCCCCceECC-cc-ccCCCcccccccccccceeEEEeCCCCCCC
Confidence 356788864 2578888754321 57765 33333 22221 10 001000000 00122234688885 57
Q ss_pred CEEEEeCCCCEEEEEeCCcc--eEEecCCCCCC--CCCCCcc-ccccccCceEEEEeCC-CCEEEEEECCCCeEEEEECC
Q 024317 116 NIYVADKSNHVIRKITNLGV--TTIAGGGSKKE--GRADGPA-QNASFSNDFELTFVPH-ICALLISDHGNQLIRQINLK 189 (269)
Q Consensus 116 ~lyVaD~~n~~I~~~~~~g~--~~~~g~~~~~~--~~~~~~~-~~~~l~~P~gia~~~~-~g~LyVaD~~n~~I~~~~~~ 189 (269)
.||+.-. .+.|.+.+-.|. ..+........ ....+.. ..........|++++. .+.|||+... +.|++.+-.
T Consensus 130 ~l~~g~~-~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-ggl~~s~Dg 207 (394)
T 3b7f_A 130 TWYAGTS-PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-GGVFESTDA 207 (394)
T ss_dssp CEEEEEE-TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-BEEEEESST
T ss_pred EEEEEec-CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-CCEEEECCC
Confidence 7998643 457887776665 44322100000 0000000 0000112257888873 4679988643 346665544
Q ss_pred CC
Q 024317 190 PE 191 (269)
Q Consensus 190 ~~ 191 (269)
|.
T Consensus 208 G~ 209 (394)
T 3b7f_A 208 GT 209 (394)
T ss_dssp TS
T ss_pred CC
Confidence 44
No 321
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=29.62 E-value=1.3e+02 Score=20.21 Aligned_cols=62 Identities=8% Similarity=0.195 Sum_probs=36.1
Q ss_pred eEEEcCCCCEEEEeCCCCEEEEEeCCcc-eEEecCCCCCCCCCCCccccccccCceEEEEeCCCCEEEEEECCCCe
Q 024317 108 SFAVDMKGNIYVADKSNHVIRKITNLGV-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHICALLISDHGNQL 182 (269)
Q Consensus 108 giavd~~G~lyVaD~~n~~I~~~~~~g~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~g~LyVaD~~n~~ 182 (269)
-..++++|.+|+.|..++.-.-.++... ..+. ......|...+-...+++ |..|..|..++.
T Consensus 18 e~~~~~~Gr~Yy~n~~t~~t~W~~P~~~~~~~~------------~~~~~~LP~gWe~~~~~~-G~~Yy~nh~t~~ 80 (88)
T 1tk7_A 18 EKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEVS------------LINEGPLPPGWEIRYTAA-GERFFVDHNTRR 80 (88)
T ss_dssp CEEEETTTEEEEEETTTTEEEEESCCCTTTCCH------------HHHSCSSCSSCEEEEETT-TEEEEEETTTTE
T ss_pred EEEECCCCCEEEEECCCCCeEeecccccccccc------------cccccccCCceEEEECCC-CCEEEEECCCCc
Confidence 3667788999998887766665555432 1100 000112434466777765 888888875543
No 322
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=25.61 E-value=4e+02 Score=24.55 Aligned_cols=77 Identities=5% Similarity=-0.037 Sum_probs=43.0
Q ss_pred CCceEEEcC-CCCEEEEeCC-----------CCEEEEEeCCcc--eEEecCCCCCCCCCCCccccccccCceEEEEeCCC
Q 024317 105 KPKSFAVDM-KGNIYVADKS-----------NHVIRKITNLGV--TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPHI 170 (269)
Q Consensus 105 ~P~giavd~-~G~lyVaD~~-----------n~~I~~~~~~g~--~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~~ 170 (269)
.+...++.+ +|.|||.-.. ...+.++|+... ..+...... .-..-.++++..+
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~------------~~~~~~~~~~~~~- 253 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK------------HDMFCPGISMDGN- 253 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS------------CCCSSCEEEECTT-
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCC------------CCCccccccCCCC-
Confidence 355778776 8889997311 125777876432 222111000 0111235666665
Q ss_pred CEEEEEEC-CCCeEEEEECCCCeEE
Q 024317 171 CALLISDH-GNQLIRQINLKPEDCS 194 (269)
Q Consensus 171 g~LyVaD~-~n~~I~~~~~~~~~~~ 194 (269)
+.|||.-. ....+++|++....-.
T Consensus 254 g~lyv~GG~~~~~v~~yd~~t~~W~ 278 (656)
T 1k3i_A 254 GQIVVTGGNDAKKTSLYDSSSDSWI 278 (656)
T ss_dssp SCEEEECSSSTTCEEEEEGGGTEEE
T ss_pred CCEEEeCCCCCCceEEecCcCCcee
Confidence 88999865 2346899988766443
No 323
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=25.11 E-value=1.2e+02 Score=25.72 Aligned_cols=30 Identities=17% Similarity=0.052 Sum_probs=19.4
Q ss_pred EEEecCCCeEEEEeCCCCEEEEEecCCCCCccEEEE
Q 024317 50 VIDRPGSSDLIVLDSSRSAFYTLSFPLSEESVVKRL 85 (269)
Q Consensus 50 iav~~~~g~lyV~D~~~~~I~~~dl~~~~~g~~~~~ 85 (269)
.++ .++.+|++.. .+.|+.+|. .+|+....
T Consensus 5 P~v--~~~~v~~gs~-dg~v~a~d~---~tG~~~W~ 34 (369)
T 2hz6_A 5 VTL--PETLLFVSTL-DGSLHAVSK---RTGSIKWT 34 (369)
T ss_dssp -----CTTEEEEEET-TSEEEEEET---TTCCEEEE
T ss_pred Cee--eCCEEEEEcC-CCEEEEEEC---CCCCEEEE
Confidence 455 4788898875 467888873 57776644
No 324
>4ftd_A Uncharacterized protein; 6-bladed-beta-propeller, immunoglobulin-like, carbohydrate metabolism, structural genomics; 1.91A {Bacteroides eggerthii}
Probab=20.25 E-value=4.7e+02 Score=23.48 Aligned_cols=83 Identities=10% Similarity=0.111 Sum_probs=45.4
Q ss_pred CceEEEcCCCCEEEEeCC-----CCEEEEEeCCc-c-eEEecCCCCCCCCCCCccccccccCceEEEEeCC-CCEEEEEE
Q 024317 106 PKSFAVDMKGNIYVADKS-----NHVIRKITNLG-V-TTIAGGGSKKEGRADGPAQNASFSNDFELTFVPH-ICALLISD 177 (269)
Q Consensus 106 P~giavd~~G~lyVaD~~-----n~~I~~~~~~g-~-~~~~g~~~~~~~~~~~~~~~~~l~~P~gia~~~~-~g~LyVaD 177 (269)
.-.++.+.+|+||.++.. .-+|++.+.-. . ..++.-..... ..+..++..=-.+..|.+ ++.|++.+
T Consensus 191 ~~~m~a~~~G~Iy~anLsg~~gs~fkIYrW~~~ts~Pe~i~s~~v~~~-----~gTg~R~Gd~isv~GD~~gNa~I~~~~ 265 (453)
T 4ftd_A 191 DYNMGALINGHVYLSSLSGGKVSPFKIYYWETPTSNPEVIANINVGNI-----PGAGNRHGDNASYNIDENGNGFIFFGD 265 (453)
T ss_dssp EEEEEEEETTEEEEEEEBCSTTSCEEEEEESSTTSCCEEEEEECGGGS-----TTCCSCBCSCCEEEECTTSCEEEEEEB
T ss_pred EEEEEEecCCCEEEEeccCCCCCceEEEEeCCCCCCceeEEEeccccC-----CcccccccceEEEEEcCCCCEEEEECC
Confidence 467888899999999853 24677776433 3 44432111000 000011222234555544 24677777
Q ss_pred CCCCeEEEEECCCCeE
Q 024317 178 HGNQLIRQINLKPEDC 193 (269)
Q Consensus 178 ~~n~~I~~~~~~~~~~ 193 (269)
.....+.||......+
T Consensus 266 n~s~~~~rwtVtng~l 281 (453)
T 4ftd_A 266 NAATEFLKVPISGHKT 281 (453)
T ss_dssp TTSSEEEEEEEETTTE
T ss_pred CCceeEEEEEEECCeE
Confidence 7777788887766544
Done!