Query 024319
Match_columns 269
No_of_seqs 204 out of 1113
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 06:11:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024319.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024319hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oedc_ f.36.1.1 (C:) Acetylch 34.5 42 0.003 25.9 6.6 81 8-91 3-84 (260)
2 d1g8qa_ a.135.1.1 (A:) CD81 ex 26.6 13 0.00097 25.1 1.7 39 109-149 11-49 (90)
3 d1q90l_ f.23.24.1 (L:) PetL su 15.7 80 0.0058 16.4 3.0 20 10-29 4-23 (32)
4 d1sb6a_ d.58.17.1 (A:) Copper 15.4 33 0.0024 20.8 1.7 16 211-226 11-26 (64)
5 d1kqha_ g.3.6.2 (A:) ACTX-HI:O 12.8 28 0.0021 18.8 0.6 7 167-173 15-21 (38)
6 d1fe0a_ d.58.17.1 (A:) ATX1 me 12.3 42 0.003 20.6 1.5 15 211-225 10-24 (66)
7 d1cpza_ d.58.17.1 (A:) Copper 11.4 53 0.0038 20.0 1.8 16 211-226 10-25 (68)
8 d1mwza_ d.58.17.1 (A:) Metal i 11.1 41 0.003 20.9 1.2 16 211-226 13-28 (73)
9 d2qifa1 d.58.17.1 (A:1-69) Cop 10.5 45 0.0033 20.4 1.2 16 211-226 12-27 (69)
10 d1osda_ d.58.17.1 (A:) Mercuri 10.4 59 0.0043 20.0 1.8 16 211-226 13-28 (72)
No 1
>d1oedc_ f.36.1.1 (C:) Acetylcholine receptor protein, delta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=34.50 E-value=42 Score=25.87 Aligned_cols=81 Identities=19% Similarity=0.150 Sum_probs=34.0
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHhhccCCCccchhhhhHHHHHHHHHHHHHHhhhhhhhccchhhHHHHHHHHHHHHHHHH
Q 024319 8 TAVLNFIAL-LCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLL 86 (269)
Q Consensus 8 l~~~n~l~~-l~G~~ll~~Gi~~~~~~~~~~~~~~~~pli~~G~~~~~vs~~Gc~Ga~~es~~lL~~y~~~l~ll~~~el 86 (269)
.+++|+++= ++=.++-.+|.|+-.+. .++......+.++..++.+.+-.-.=...+...++..|+.+.++++.+-+
T Consensus 3 ~y~~n~~~P~~~~~~l~~~~f~lp~~~---~~r~~l~it~lLs~~vf~~~v~~~lP~tS~~vPli~~y~~~~~~~v~~s~ 79 (260)
T d1oedc_ 3 FYVINFITPCVLISFLASLAFYLPAES---GEKMSTAISVLLAQAVFLLLTSQRLPETALAVPLIGKYLMFIMSLVTGVI 79 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTHHHHHHHHHHHHHH
T ss_pred eEEEhHHHHHHHHHHHHHHHeeeCCCC---CCcEEeeHHHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 356666542 22222234556665443 22432222233333333333333332233445566566655555554444
Q ss_pred HHHhh
Q 024319 87 VVLVF 91 (269)
Q Consensus 87 ~~~i~ 91 (269)
+..++
T Consensus 80 ~~t~~ 84 (260)
T d1oedc_ 80 VNCGI 84 (260)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 33333
No 2
>d1g8qa_ a.135.1.1 (A:) CD81 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.65 E-value=13 Score=25.13 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=22.0
Q ss_pred hhhhhhhhhhHHHhhhccCccchHHHHhhhhcCCccccccc
Q 024319 109 YKEYRLDKFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQ 149 (269)
Q Consensus 109 ~~~y~~~~~~~wl~~~~~~~~~W~~iq~cl~~~~~Ccg~~~ 149 (269)
++++..+.|.+++++. .+......-.-++.++.|||..+
T Consensus 11 v~~FY~~~Y~~y~~~~--~~~~~k~tLk~fH~~L~CCG~~~ 49 (90)
T d1g8qa_ 11 VKQFYDQALQQAVVDD--DANNAKAVVKTFHETLDCCGSST 49 (90)
T ss_dssp HHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHHTCCSCTT
T ss_pred HHHHHHHHHHHHhhcC--CcchHHHHHHHHHHHHccCCCCC
Confidence 4455555666655433 23334433334566889999875
No 3
>d1q90l_ f.23.24.1 (L:) PetL subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=15.68 E-value=80 Score=16.36 Aligned_cols=20 Identities=25% Similarity=0.615 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 024319 10 VLNFIALLCSIPIIASGIWL 29 (269)
Q Consensus 10 ~~n~l~~l~G~~ll~~Gi~~ 29 (269)
+.+.+=.++|.+.+.+|+|+
T Consensus 4 i~syvglligal~~tlgiyl 23 (32)
T d1q90l_ 4 ITSYVGLLIGALVFTLGIYL 23 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 33444556777777788775
No 4
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=15.44 E-value=33 Score=20.85 Aligned_cols=16 Identities=25% Similarity=0.706 Sum_probs=13.2
Q ss_pred cCcchHHHHHHHHHHh
Q 024319 211 NCSSCKAGLLGNLRNE 226 (269)
Q Consensus 211 ~c~~Ck~~i~~~l~~~ 226 (269)
.|.+|..++.+.+++.
T Consensus 11 ~C~~C~~~Ie~~l~~~ 26 (64)
T d1sb6a_ 11 ACEACAEAVTKAVQNE 26 (64)
T ss_dssp TSSSCTHHHHHHHHHH
T ss_pred cchhHHHHHHHHHhcC
Confidence 5899999999888753
No 5
>d1kqha_ g.3.6.2 (A:) ACTX-HI:OB4219 {Funnel-web spider (Hadronyche infensa) [TaxId: 153481]}
Probab=12.81 E-value=28 Score=18.85 Aligned_cols=7 Identities=57% Similarity=1.435 Sum_probs=5.1
Q ss_pred ccccCCC
Q 024319 167 ARCCKPP 173 (269)
Q Consensus 167 ~sCC~~p 173 (269)
+|||+|-
T Consensus 15 dscckpy 21 (38)
T d1kqha_ 15 DSCCKPY 21 (38)
T ss_dssp CCBCTTC
T ss_pred Cccccce
Confidence 4799874
No 6
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}
Probab=12.31 E-value=42 Score=20.64 Aligned_cols=15 Identities=20% Similarity=0.578 Sum_probs=12.6
Q ss_pred cCcchHHHHHHHHHH
Q 024319 211 NCSSCKAGLLGNLRN 225 (269)
Q Consensus 211 ~c~~Ck~~i~~~l~~ 225 (269)
.|.+|..++.+.|++
T Consensus 10 ~C~~C~~~I~~aL~~ 24 (66)
T d1fe0a_ 10 TCGGCAEAVSRVLNK 24 (66)
T ss_dssp CSHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhc
Confidence 588999999888765
No 7
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=11.41 E-value=53 Score=20.05 Aligned_cols=16 Identities=19% Similarity=0.451 Sum_probs=13.4
Q ss_pred cCcchHHHHHHHHHHh
Q 024319 211 NCSSCKAGLLGNLRNE 226 (269)
Q Consensus 211 ~c~~Ck~~i~~~l~~~ 226 (269)
.|.+|...+.+.+++.
T Consensus 10 ~C~~C~~~Ie~~l~~~ 25 (68)
T d1cpza_ 10 SCNHCVARIEEAVGRI 25 (68)
T ss_dssp CSSSHHHHHHHHHHTS
T ss_pred EcHHHHHHHHHHHhcC
Confidence 5889999999988764
No 8
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=11.13 E-value=41 Score=20.92 Aligned_cols=16 Identities=19% Similarity=0.601 Sum_probs=13.6
Q ss_pred cCcchHHHHHHHHHHh
Q 024319 211 NCSSCKAGLLGNLRNE 226 (269)
Q Consensus 211 ~c~~Ck~~i~~~l~~~ 226 (269)
.|.+|...+.+.|++.
T Consensus 13 ~C~~C~~~Ie~~l~~~ 28 (73)
T d1mwza_ 13 DCAACARKVENAVRQL 28 (73)
T ss_dssp CSHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHhcC
Confidence 5889999999988864
No 9
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=10.48 E-value=45 Score=20.43 Aligned_cols=16 Identities=13% Similarity=0.418 Sum_probs=13.4
Q ss_pred cCcchHHHHHHHHHHh
Q 024319 211 NCSSCKAGLLGNLRNE 226 (269)
Q Consensus 211 ~c~~Ck~~i~~~l~~~ 226 (269)
.|.+|.+.+...+++.
T Consensus 12 ~C~~C~~~Ie~~l~~~ 27 (69)
T d2qifa1 12 SCQHCVKAVETSVGEL 27 (69)
T ss_dssp CSHHHHHHHHHHHHTS
T ss_pred cCHHHHHHHHHHHhcC
Confidence 5889999999988763
No 10
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=10.39 E-value=59 Score=20.05 Aligned_cols=16 Identities=19% Similarity=0.503 Sum_probs=13.4
Q ss_pred cCcchHHHHHHHHHHh
Q 024319 211 NCSSCKAGLLGNLRNE 226 (269)
Q Consensus 211 ~c~~Ck~~i~~~l~~~ 226 (269)
.|.+|...+...+++.
T Consensus 13 ~C~~C~~~Ie~~l~~~ 28 (72)
T d1osda_ 13 TCSACPITVKKAISKV 28 (72)
T ss_dssp CSTTHHHHHHHHHHTS
T ss_pred ccHHHHHHHHHHHHcC
Confidence 5889999999988763
Done!