Your job contains 1 sequence.
>024326
MLAMDPYFWSSCRNDNGVEILTDEFVVNNGFQGKSRNGSSSHSSLVLDSERGELVEANVK
LQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLK
ELDKNAMEATEGFLIPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLLSDLRRVLEA
LHLSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVLDKFSATEE
FLLGARLSNKRRRVSLFDSSLSSSSDYLW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024326
(269 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 340 6.9e-31 1
TAIR|locus:2063203 - symbol:AT2G41130 "AT2G41130" species... 308 1.7e-27 1
UNIPROTKB|Q9FTQ1 - symbol:P0665D10.21 "DNA binding protei... 305 3.5e-27 1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 305 3.5e-27 1
TAIR|locus:2103560 - symbol:AT3G56770 "AT3G56770" species... 290 1.4e-25 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 281 1.2e-24 1
UNIPROTKB|Q7F7Z2 - symbol:Os01g0159800 "ESTs C26093(C1162... 278 2.6e-24 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 170 1.1e-23 3
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 266 4.8e-23 1
UNIPROTKB|Q75IR0 - symbol:OSJNBb0099P06.13 "Putative unch... 266 4.8e-23 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 264 7.8e-23 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 259 2.6e-22 1
UNIPROTKB|Q7XZF8 - symbol:OSJNBb0033J23.9 "Helix-loop-hel... 253 1.1e-21 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 153 4.9e-09 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 139 5.9e-09 2
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 153 1.8e-08 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 144 6.9e-08 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 117 7.0e-08 2
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 147 1.0e-07 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 146 1.2e-07 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 137 5.2e-07 2
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 111 1.2e-06 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 137 1.5e-06 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 134 5.6e-06 2
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 124 6.7e-06 2
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 132 7.5e-06 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 130 9.5e-06 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 117 9.6e-06 2
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 129 1.0e-05 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 128 1.4e-05 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 121 1.4e-05 2
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 126 1.6e-05 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 126 1.8e-05 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 127 1.8e-05 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 99 3.1e-05 2
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 123 4.6e-05 1
UNIPROTKB|K7GSB9 - symbol:ARNT "Uncharacterized protein" ... 101 4.6e-05 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 119 4.8e-05 2
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 119 6.2e-05 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 120 6.8e-05 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 122 7.1e-05 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 104 7.1e-05 2
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 121 7.3e-05 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 118 7.6e-05 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 122 8.0e-05 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 121 9.2e-05 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 115 9.7e-05 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 116 0.00013 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 113 0.00030 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 114 0.00036 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 99 0.00038 2
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 114 0.00041 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 112 0.00044 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 114 0.00044 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 113 0.00045 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 108 0.00045 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 110 0.00048 2
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 110 0.00051 1
UNIPROTKB|F1S6X1 - symbol:LOC100738978 "Uncharacterized p... 89 0.00056 2
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 114 0.00057 2
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 96 0.00064 2
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 109 0.00067 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 110 0.00076 2
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 98 0.00083 2
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 113 0.00085 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 109 0.00088 1
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 78/198 (39%), Positives = 125/198 (63%)
Query: 60 KLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQL 119
K+ + + + +++AA K+H EAER RR+RIN HL LRS++P TK DKA+LL EVI +
Sbjct: 160 KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHV 219
Query: 120 KELDKNAMEATEGFLIPTDIDEVKV---EQQEDGLDGAPYSIKASLCCNYKPGLLSDLRR 176
KEL + +E L+PT+ DE+ V E++E G DG + IKASLCC + LL D+ +
Sbjct: 220 KELKRETSVISETNLVPTESDELTVAFTEEEETG-DGR-FVIKASLCCEDRSDLLPDMIK 277
Query: 177 VLEALHLSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVLDKFS 236
L+A+ L +KAEI T+ GR+KN+ + +E + E E + + ++ +A+++V++K +
Sbjct: 278 TLKAMRLKTLKAEITTVGGRVKNVLFVTG-EESSGEEVEE-EYCIGTIEEALKAVMEKSN 335
Query: 237 ATEEFLLGARLSNKRRRV 254
E G + KR+R+
Sbjct: 336 VEESSSSG---NAKRQRM 350
>TAIR|locus:2063203 [details] [associations]
symbol:AT2G41130 "AT2G41130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009941
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC004261 EMBL:AK119059 EMBL:AY074639 IPI:IPI00526770
PIR:T02106 RefSeq:NP_181646.1 UniGene:At.37024
ProteinModelPortal:O80674 SMR:O80674 EnsemblPlants:AT2G41130.1
GeneID:818712 KEGG:ath:AT2G41130 TAIR:At2g41130 eggNOG:NOG239121
HOGENOM:HOG000006083 InParanoid:O80674 OMA:RERIKSH PhylomeDB:O80674
ProtClustDB:CLSN2683662 Genevestigator:O80674 Uniprot:O80674
Length = 253
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 68/192 (35%), Positives = 123/192 (64%)
Query: 66 VSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKN 125
+++DR++AAL+NH EAER RR+RIN HL+ LR+++ +K DKATLL +V+ +++EL +
Sbjct: 59 MAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQ 118
Query: 126 AMEATEG--FLIPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLLSDLRRVLEALHL 183
+E ++ L+P++ DE+ V D + KASLCC + LL DL +L++L++
Sbjct: 119 TLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNM 178
Query: 184 SIVKAEIATLEGRMKNIFVMASCKELN-FENTEVCQSLVSSV-HQAIRSVLDKFSATEEF 241
++AE+ T+ GR +++ V+A+ KE++ E+ Q+ + S+ ++ +S++++ S
Sbjct: 179 KTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSSKSLMERSSGG--- 235
Query: 242 LLGARLSNKRRR 253
G +KRRR
Sbjct: 236 --GGGERSKRRR 245
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 75/194 (38%), Positives = 114/194 (58%)
Query: 65 GVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDK 124
G E+++ ALK+H EAER RR+RIN HL TLR+++P KMDKA LL EV+ +K+L
Sbjct: 69 GGREEKAAMALKSHSEAERRRRERINAHLATLRTMVPCTDKMDKAALLAEVVGHVKKLKS 128
Query: 125 NAMEATEGFLIPTDIDEVKVEQQE-DGLDG-APYSIKASLCCNYKPGLLSDLRRVLEALH 182
A +P+ DEV V++ G G P ++A+L C+ + L D++R L+ L
Sbjct: 129 AAARVGRRATVPSGADEVAVDEASATGGGGEGPLLLRATLSCDDRADLFVDVKRALQPLG 188
Query: 183 LSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVLDKFSATEEFL 242
L +V +E+ TL GR++ F++ SC + ++SV A++SVLDK S+ +F
Sbjct: 189 LEVVGSEVTTLGGRVRLAFLV-SCGSRG----GAAAAAMASVRHALQSVLDKASSGFDFA 243
Query: 243 LGAR--LSNKRRRV 254
A L +KRR+V
Sbjct: 244 PRAASLLGSKRRKV 257
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 71/192 (36%), Positives = 114/192 (59%)
Query: 60 KLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQL 119
KL + V + +++AA K+H EAER RR+RIN HL LRS++P TK DKA+LL EVI +
Sbjct: 118 KLSAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHM 177
Query: 120 KELDKNAMEATEGFLIPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLLSDLRRVLE 179
KEL + + T+ + +PT+ D++ V+ + +G I+AS CC + L+ D+ L+
Sbjct: 178 KELKRQTSQITDTYQVPTECDDLTVDSSYNDEEGN-LVIRASFCCQDRTDLMHDVINALK 236
Query: 180 ALHLSIVKAEIATLEGRMKNIFVMA---------SCKELNFENTEV--------CQSLVS 222
+L L +KAEIAT+ GR+KNI ++ NF+ +V + VS
Sbjct: 237 SLRLRTLKAEIATVGGRVKNILFLSREYDDEEDHDSYRRNFDGDDVEDYDEERMMNNRVS 296
Query: 223 SVHQAIRSVLDK 234
S+ +A+++V++K
Sbjct: 297 SIEEALKAVIEK 308
>TAIR|locus:2103560 [details] [associations]
symbol:AT3G56770 "AT3G56770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL390921 HOGENOM:HOG000006083 ProtClustDB:CLSN2683662
IPI:IPI00540753 PIR:T51265 RefSeq:NP_191236.1 UniGene:At.53958
ProteinModelPortal:Q9LET0 SMR:Q9LET0 EnsemblPlants:AT3G56770.1
GeneID:824844 KEGG:ath:AT3G56770 TAIR:At3g56770 eggNOG:NOG237033
InParanoid:Q9LET0 OMA:RRIIFKV PhylomeDB:Q9LET0
Genevestigator:Q9LET0 Uniprot:Q9LET0
Length = 230
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 69/173 (39%), Positives = 108/173 (62%)
Query: 66 VSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKN 125
V ED+++A+L+NH EAER RR RIN HL+ LR L+ +K DK+TLL +V+ ++KEL +
Sbjct: 37 VYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQ 96
Query: 126 AMEATEGFLIPTDIDEVKVEQQEDGLDGAPYSI--KASLCCNYKPGLLSDLRRVLEALHL 183
+E T+ IP++ DE+ V ED G I K S CC +P LL DL L++L +
Sbjct: 97 TLEITDE-TIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQM 155
Query: 184 SIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVLDKFS 236
+ A++ T+ GR +N+ V+A+ KE + QS V+ + A++S+L++ S
Sbjct: 156 ETLFADMTTVGGRTRNVLVVAADKEHHG-----VQS-VNFLQNALKSLLERSS 202
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 67/161 (41%), Positives = 100/161 (62%)
Query: 60 KLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQL 119
++ K + + +++AA ++H EAER RR+RINGHL LRSL+P TK DKA+LL EVI +
Sbjct: 107 RMTAKEIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHV 166
Query: 120 KELDKNA---ME--ATEG-------FLIPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYK 167
KEL + ME A G L+PT+ DE++V+ D +G +ASLCC +
Sbjct: 167 KELKRQTSAMMEDGAAGGEAAAAPVVLLPTEDDELEVDAAAD--EGGRLVARASLCCEDR 224
Query: 168 PGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKE 208
L+ + R L AL L +AEIATL GR++++ ++A+ +E
Sbjct: 225 ADLIPGIARALAALRLRARRAEIATLGGRVRSVLLIAAVEE 265
Score = 148 (57.2 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 41/122 (33%), Positives = 72/122 (59%)
Query: 134 LIPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLLSDLRRVLEALHLSIVKAEIATL 193
L+PT+ DE++V+ D +G +ASLCC + L+ + R L AL L +AEIATL
Sbjct: 193 LLPTEDDELEVDAAAD--EGGRLVARASLCCEDRADLIPGIARALAALRLRARRAEIATL 250
Query: 194 EGRMKNIFVMASCKEL------NFENTE----VCQS-----LVSSVHQAIRSVLDKFSAT 238
GR++++ ++A+ +E N ++ E V S LV+S+H+A+R V+++ +A+
Sbjct: 251 GGRVRSVLLIAAVEEEDPDEAGNDDDGEHGYGVAASHRRHELVASIHEALRGVMNRKAAS 310
Query: 239 EE 240
+
Sbjct: 311 SD 312
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 70/191 (36%), Positives = 107/191 (56%)
Query: 74 ALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAMEATEGF 133
ALK H EAER RR+RIN HL TLR +IP +MDKATLL V+ Q+K+L + A E T+
Sbjct: 65 ALKIHSEAERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQVKDLKRKASEITQRT 124
Query: 134 LIPTDIDEVKVEQ-QEDGLDGAP--------YSIKASLCCNYKPGLLSDLRRVLEALHLS 184
+P + +EV +E D A IKAS+ C+ +P L++ + L L
Sbjct: 125 PLPPETNEVSIECFTGDAATAATTVAGNHKTLYIKASISCDDRPDLIAGITHAFHGLRLR 184
Query: 185 IVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVLDKFSATEEFLLG 244
V+AE+ +L GR++++F++ C+E +SL +V QA+ V A+ E + G
Sbjct: 185 TVRAEMTSLGGRVQHVFIL--CREEGIAGGVSLKSLKEAVRQALAKV-----ASPELVYG 237
Query: 245 A-RLSNKRRRV 254
+ +KR+R+
Sbjct: 238 SSHFQSKRQRI 248
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 170 (64.9 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 60 KLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQL 119
++ + + + +++AA ++H EAER RR+RINGHL LRSL+P TK DKA+LL EVI +
Sbjct: 92 RVTAREIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHV 151
Query: 120 KELDK 124
KEL +
Sbjct: 152 KELKR 156
Score = 134 (52.2 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 134 LIPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLLSDLRRVLEALHLSIVKAEIATL 193
L+PT+ DE+ V+ D +G ++ASLCC +P L+ D+ R L AL L +AEI TL
Sbjct: 192 LLPTEADELAVDAAVDA-EGK-LVVRASLCCEDRPDLIPDIARALAALRLRARRAEITTL 249
Query: 194 EGRMKNIFVMAS 205
GR++++ ++ +
Sbjct: 250 GGRVRSVLLITA 261
Score = 38 (18.4 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 221 VSSVHQAIRSVLDKFSA 237
+++V +A+R V+D+ +A
Sbjct: 310 IATVQEALRGVMDRRAA 326
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 71/193 (36%), Positives = 112/193 (58%)
Query: 56 EANVKLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEV 115
E + RKG S A+++H EAER RR+RIN HL TLR+L+P A++MDKA LL EV
Sbjct: 6 ECSAAAVRKGGSP-----AVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEV 60
Query: 116 ISQLKELDKNAMEATEG--FLIPTDIDEVKVEQQEDG---LDGAPY-----------SIK 159
+ ++EL A +ATEG ++P + DEV VE ++D D Y ++
Sbjct: 61 VRHVRELRCRADDATEGADVVVPGEGDEVGVEDEDDDEGERDEGCYVVGGGDRRWRRRVR 120
Query: 160 ASLCCNYKPGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQS 219
A +CC +PGL+SDL R + ++ V+AE+AT+ GR +++ + + + + +
Sbjct: 121 AWVCCADRPGLMSDLGRAVRSVSARPVRAEVATVGGRTRSVLELDVVVASDAADNDRAVA 180
Query: 220 LVSSVHQAIRSVL 232
L S++ A+R+VL
Sbjct: 181 L-SALRAALRTVL 192
>UNIPROTKB|Q75IR0 [details] [associations]
symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
Uniprot:Q75IR0
Length = 271
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 70/195 (35%), Positives = 106/195 (54%)
Query: 65 GVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDK 124
G S A+ H EAER RR+RIN HL TLR ++P A +MDKATLL V++Q+K L
Sbjct: 57 GRSAAAQATAMTIHSEAERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVKHLKT 116
Query: 125 NAMEATE---GFLIPTDIDEVKVEQQEDG--LDGAPYSIKASLCCNYKPGLLSDLRRVLE 179
A EAT IP + +EV V+ G A ++A++ C+ +PGLL+D+
Sbjct: 117 RATEATTPSTAATIPPEANEVTVQCYAGGEHTAAARTYVRATVSCDDRPGLLADIAATFR 176
Query: 180 ALHLSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVLDKFSATE 239
L L + A+++ L GR ++ FV+ C+E E ++ + +A+R L K A
Sbjct: 177 RLRLRPLSADMSCLGGRTRHAFVL--CREEEEEEDAAAEA--RPLKEAVRQALAKV-ALP 231
Query: 240 EFLLGARLSNKRRRV 254
E + G +KR+R+
Sbjct: 232 ETVYGGGGRSKRQRL 246
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 66/193 (34%), Positives = 110/193 (56%)
Query: 65 GVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDK 124
G+ + S++ ++H AE+ RR RIN HL LR L+P + K+DKA LL VI Q+KEL +
Sbjct: 56 GIEKAESLS--RSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQ 113
Query: 125 NAMEATEGFLIPTDIDEVKVEQQE-DGLDGAPYSI--KASLCCNYKPGLLSDLRRVLEAL 181
A E+ +PT+ DEV V+ + + +I KAS CC +P +S++ RVL L
Sbjct: 114 KAAESPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKL 173
Query: 182 HLSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVLDKFSATEEF 241
L ++AEI ++ GRM+ F++ K+ N T + ++ Q++ S L++ +++
Sbjct: 174 QLETIQAEIISVGGRMRINFIL---KDSNCNETTNIAASAKALKQSLCSALNRITSSSTT 230
Query: 242 LLGA-RLSNKRRR 253
R+ +KR+R
Sbjct: 231 TSSVCRIRSKRQR 243
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 70/193 (36%), Positives = 109/193 (56%)
Query: 70 RSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAMEA 129
R A ++H EAER RR+RIN HLDTLR L+P A++MDKA LL EV+ +++L A A
Sbjct: 24 RWTRARRSHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSEA--A 81
Query: 130 TEGFLIPTDIDEVKVEQQEDGLDG---------APYSIKASLCCNYKPGLLSDLRRVLEA 180
++P + DEV VE++E ++G A +KAS+CC +PGL+S+L +
Sbjct: 82 GSAAVVPGEGDEVVVEEEEVEVEGCSCDAGERQAARRVKASVCCADRPGLMSELGDAERS 141
Query: 181 LHLSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVLDKFSATEE 240
+ V+AEIAT+ GR ++ + + S + ++ A+R+V+ ++E
Sbjct: 142 VSARAVRAEIATVGGRTRSDLELDVARTAAAGGGSNGASQLPALQAALRAVI----MSQE 197
Query: 241 FLLGARLSNKRRR 253
LL S K+RR
Sbjct: 198 ELLAVE-SYKQRR 209
>UNIPROTKB|Q7XZF8 [details] [associations]
symbol:OSJNBb0033J23.9 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006083 OMA:RERIKSH EMBL:AC137507 STRING:Q7XZF8
EnsemblPlants:LOC_Os03g59670.1 Uniprot:Q7XZF8
Length = 268
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 57/145 (39%), Positives = 90/145 (62%)
Query: 67 SEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNA 126
++DR++AA +NH EAE+ RR+RI HLD LR+++ K+DKA+LL + + ++++L +
Sbjct: 60 AQDRALAASRNHREAEKRRRERIKSHLDRLRAVLACDPKIDKASLLAKAVERVRDLKQRM 119
Query: 127 M---EATEGFLIPTDIDEVKVEQQEDG----LDGAPYSIKASLCCNYKPGLLSDLRRVLE 179
EA L PT+ DE+ V G GA +AS+CC+ + LL +L L
Sbjct: 120 AGIGEAAPAHLFPTEHDEIVVLASGGGGVGGAGGAAAVFEASVCCDDRCDLLPELIETLR 179
Query: 180 ALHLSIVKAEIATLEGRMKNIFVMA 204
AL L ++AE+ATL GR++N+ V+A
Sbjct: 180 ALRLRTLRAEMATLGGRVRNVLVLA 204
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 153 (58.9 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 55/163 (33%), Positives = 79/163 (48%)
Query: 56 EANVKLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEV 115
E N K K + S KN + AER RRKR+N L LRS++P TKMD+ ++L +
Sbjct: 135 ETNKKRSNKKLEGQPS----KN-LMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDA 189
Query: 116 ISQLKEL-DK-NAMEATEGFL-----IPTDI-DEVKVEQQ-EDGLDGAPYSIKASLCCNY 166
I +KEL DK N ++ E L + T I +E V + +D + +CC
Sbjct: 190 IDYMKELLDKINKLQEDEQELGSNSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPT 249
Query: 167 KPGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKEL 209
KPGL+ LE L L I + I+ + + ASC E+
Sbjct: 250 KPGLVVSTVSTLETLGLEIEQCVISCFS----DFSLQASCFEV 288
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 139 (54.0 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 65 GVSEDRSVAALKN---HIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKE 121
G E RS A + ++EAER RRK++NGHL LRSL+P TKMD+A++L + I +
Sbjct: 270 GDGEGRSGGAKRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVG 329
Query: 122 LDKNAME 128
L K E
Sbjct: 330 LQKQVKE 336
Score = 58 (25.5 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 166 YKPGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIF-VMASCKELNFENTEVCQSLVSSV 224
+KPG L + AL L ++ + T + + N+F VM E+ + V SL+
Sbjct: 436 HKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVFRVMVRDSEVAVQADRVRDSLLEVT 495
Query: 225 HQAIRSV 231
+ V
Sbjct: 496 RETYPGV 502
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 153 (58.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 49/189 (25%), Positives = 91/189 (48%)
Query: 54 LVEANVKLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLT 113
+VE K +++G NH+EAER RR+++N +LR+++P +KMDKA+LL
Sbjct: 393 VVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLG 452
Query: 114 EVISQLKELDKNAMEATEGFLIPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLLSD 173
+ IS + EL K+ ++ E ++ V +E G A S+K C N + +L +
Sbjct: 453 DAISYISEL-KSKLQKAESDKEELQ-KQIDVMNKEAG--NAKSSVKDRKCLNQESSVLIE 508
Query: 174 LRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVSS--VHQAIRSV 231
+ ++ + + I + M + KEL+ E S+V+ + QA +
Sbjct: 509 MEVDVKIIGWDAM-IRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKM 567
Query: 232 LDKFSATEE 240
++F ++
Sbjct: 568 GNQFFTQDQ 576
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 144 (55.7 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 47/167 (28%), Positives = 84/167 (50%)
Query: 75 LKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAMEATEGFL 134
LK H+ AER RR+++N L L +L+PG K DKAT+L + I LK+L + + E +
Sbjct: 130 LKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERV 189
Query: 135 IPTDIDE--VKVEQQEDGLDGAPYSIKASLCCNYKPGLLSDLRRVLEALHLSIVKAEIAT 192
+ +D+ + V++ + LD S +S C P LS + +SI K +
Sbjct: 190 VTKKMDQSIILVKRSQVYLDDDSSSY-SSTCSAASP--LSS-----SSDEVSIFKQTMPM 241
Query: 193 LEGRM--KNIFVMASCKELNFENTEVCQ-SLVSSVHQAIRSVLDKFS 236
+E R+ +++ + C E + C ++SS+ + V++ F+
Sbjct: 242 IEARVSDRDLLIRVHC-----EKNKGCMIKILSSLEKFRLEVVNSFT 283
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 117 (46.2 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 76 KNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKEL-DK-NAMEATE 131
KN + AER RRKR+N L LRS++P +KMD+ ++L + I +KEL DK N ++ E
Sbjct: 178 KN-LMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEE 234
Score = 68 (29.0 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 151 LDGAPYSIKASLCCNYKPGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKE 208
+D + +CC+ KPGLL LE L L I + I+ + + ASC E
Sbjct: 270 IDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFS----DFSLQASCSE 323
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 147 (56.8 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 32/93 (34%), Positives = 54/93 (58%)
Query: 77 NHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAMEA-TEGFLI 135
NH+EAER RR+++N LR+++P +KMDKA+LL + I+ + EL ++ +E I
Sbjct: 452 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQI 511
Query: 136 PTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKP 168
++EVK+E + + +S C + KP
Sbjct: 512 KNQLEEVKLELAGRKASASGGDMSSS-CSSIKP 543
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/135 (30%), Positives = 75/135 (55%)
Query: 77 NHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAMEATEGFLIP 136
NH+EAER RR+++N LRS++P +KMDKA+LL + IS +KEL + ++ E +
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEK-VKIMEDERVG 453
Query: 137 TD--IDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLLSD-LRRVLEAL---HLSIVKAEI 190
TD + E E+ + ++ + L S R+++A+ ++S+++A++
Sbjct: 454 TDKSLSESNTITVEESPEVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKL 513
Query: 191 ATLEGRMKNIFVMAS 205
+ E M + FV+ S
Sbjct: 514 SLAEDTMFHTFVIKS 528
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 137 (53.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 25/59 (42%), Positives = 41/59 (69%)
Query: 74 ALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAMEATEG 132
++KNH+ +ER RR+++N L+SL+P K+DKA++L+E I+ LKEL++ E G
Sbjct: 185 SIKNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESG 243
Score = 36 (17.7 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 6/32 (18%), Positives = 18/32 (56%)
Query: 164 CNYKPGLLSDLRRVLEALHLSIVKAEIATLEG 195
C +K +++ + +++L L +V + + +G
Sbjct: 307 CRWKELMMTRVFDAIKSLRLDVVSVQASAPDG 338
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 111 (44.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 56 EANVKLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEV 115
E N K ++ R+ + ++HI AER RR+++ L +L+PG KMDKA++L +
Sbjct: 131 EFNRKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDA 190
Query: 116 ISQLKELDKNAMEATE 131
+ +K L + E E
Sbjct: 191 LKHIKYLQERVGELEE 206
Score = 62 (26.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 29/101 (28%), Positives = 50/101 (49%)
Query: 131 EGFLIPTDIDEVKVE-QQEDGLDGAPYSIKASLCCNYKPGLLSDLRRVLEALHLSIVKAE 189
+GF D+ E++V ED L IK + C + G L+ + +E LH+ I +
Sbjct: 239 DGFS-DLDLPEIEVRFSDEDVL------IK--ILCEKQKGHLAKIMAEIEKLHILITNSS 289
Query: 190 IATLEGRMKNIFVMASCKELNFENT--EVCQSLVSSVHQAI 228
+ G +I ++A KE +F+ T +V +SL S++ I
Sbjct: 290 VLNF-GPTLDITIIAK-KESDFDMTLMDVVKSLRSALSNFI 328
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 58 NVKLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVIS 117
N + +++G A NH+EAER RR+++N LRS++P +KMDKA+LL + +S
Sbjct: 414 NNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVS 473
Query: 118 QLKELDKN--AMEATE---GFLI--PTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGL 170
+ EL MEA G+ P +D + Q G D + + C +
Sbjct: 474 YINELHAKLKVMEAERERLGYSSNPPISLDS-DINVQTSGED-----VTVRINCPLESHP 527
Query: 171 LSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKELNFE 212
S + E + ++ + + + + + FV+ S +EL E
Sbjct: 528 ASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVKS-EELTKE 568
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 134 (52.2 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 28/75 (37%), Positives = 50/75 (66%)
Query: 77 NHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAMEATEGFLIP 136
NH+EAER RR+++N +LR+++P +KMDKA+LL + IS + EL K+ ++ E
Sbjct: 415 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINEL-KSKLQQAES---- 469
Query: 137 TDIDEVKVEQQEDGL 151
D+ +++++ DG+
Sbjct: 470 ---DKEEIQKKLDGM 481
Score = 36 (17.7 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 5 DPYFWSSCRNDNGVEILTDEFVVNNG 30
DP W S + G+E VNNG
Sbjct: 263 DPALWISEPTNTGIE---SPARVNNG 285
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 124 (48.7 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 73 AALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAME 128
+++KNH+ +ER RR+++ L+S++P K+DKA++L E I+ LKEL+K E
Sbjct: 240 SSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEE 295
Score = 44 (20.5 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 11/68 (16%), Positives = 36/68 (52%)
Query: 162 LCCNYKPGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKELNFENTE-VCQSL 220
L C +K L++ + ++ + L ++ + +T +G + + + A ++++ +C +
Sbjct: 363 LQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDGLL-GLKIQAKVVVSAAKSSQQICSIV 421
Query: 221 VSSVHQAI 228
S++Q++
Sbjct: 422 YLSIYQSL 429
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 132 (51.5 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 35/102 (34%), Positives = 58/102 (56%)
Query: 56 EANVKLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEV 115
EA + +++G NH+EAER RR+++N LR+++P +KMDKA+LL +
Sbjct: 503 EAEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDA 562
Query: 116 ISQLKEL-DK-NAMEATEGFLIPTDIDEVKVEQQEDGLDGAP 155
IS + EL K A+E T+ + + ++ +K E+ D AP
Sbjct: 563 ISYINELRGKLTALE-TDKETLQSQMESLKKER--DARPPAP 601
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 130 (50.8 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 76 KNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAMEATEGFLI 135
KN + AER RRK++N L LRSL+P TK+D+A++L + I+ +KEL A E +
Sbjct: 314 KN-LMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 136 PTDIDEVKVEQQED-GLDGAPYS-IKASLCCNYK-PGLLSD--LRRVLEALHLSIVKAEI 190
++ ++ Q L+G + L CN P + D L + + ++
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDV 432
Query: 191 ATLEGRMKNIFVMASCK 207
A L+GR FV C+
Sbjct: 433 AQLDGR--EFFVKVICE 447
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 117 (46.2 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 76 KNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAMEATEGF-L 134
KN + AER RRKR+N L LRS++P +KMD+ ++L + I +KEL + E +
Sbjct: 182 KN-LMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEIGV 240
Query: 135 IPTDID 140
P ++D
Sbjct: 241 TPEELD 246
Score = 50 (22.7 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 20/85 (23%), Positives = 33/85 (38%)
Query: 159 KASLCCNYKPGLLSDLRRVLEALHLSIVKAEIATLEG-RMKNIFVMASCKELNFENTEVC 217
+ +CC PG+L LE L L I + ++ M+ + K E+
Sbjct: 281 RIEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQVVSTDEIK 340
Query: 218 QSLVSSVHQAIRSVLDKFSATEEFL 242
Q+L S R+ + S EF+
Sbjct: 341 QTLFRSAGYGGRNY-SRSSTIYEFI 364
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 55/180 (30%), Positives = 86/180 (47%)
Query: 50 ERGELVEANVKLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKA 109
E G+ E+ V++ G + + + A KN + AER RRK++N L LRS++P +KMD+A
Sbjct: 283 ESGKAAES-VQIGGGGKGKKKGMPA-KN-LMAERRRRKKLNDRLYMLRSVVPKISKMDRA 339
Query: 110 TLLTEVISQLKEL-----D-KNAMEATE-GFLIPTDIDEVKVEQQEDGLDGAPYSIKASL 162
++L + I LKEL D N +E+T G L PT + L +K L
Sbjct: 340 SILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLS---CRVKEEL 396
Query: 163 CCNYKPGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVS 222
C + P RV L I GR + ++A+ K L+ +V Q+++S
Sbjct: 397 CPSSLPSPKGQQARVEVRLREGRA-VNIHMFCGRRPGL-LLATMKALDNLGLDVQQAVIS 454
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 57 ANVKLQRK-GVSEDRSVAALK----NHIEAERNRRKRINGHLDTLRSLIPGATKMDKATL 111
A V L++K G R A + NH+EAER RR+++N LR+++P +KMDK +L
Sbjct: 318 ATVMLEKKKGKKRGRKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSL 377
Query: 112 LTEVISQLKELDKNAMEAT-EGFLIPTDIDEVK-VEQQEDGLDGA-PYSIKAS 161
L + + + EL A E I +E+K + Q + + Y KAS
Sbjct: 378 LEDAVCYINELKSKAENVELEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKAS 430
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 121 (47.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 57 ANVKLQRKGVSEDRSVAA--LKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTE 114
A VK G S + A +++HI AER RR++IN L ++IPG KMDKAT+L +
Sbjct: 145 AAVKKGGGGGSSSSAAAPGYVQDHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGD 204
Query: 115 VISQLKELDKNA--MEATEG 132
+ +KEL + +E +G
Sbjct: 205 AVKYVKELQEKVKTLEEEDG 224
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/61 (22%), Positives = 21/61 (34%)
Query: 157 SIKASLCCNYKPGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKELNFENTEV 216
S+ + C GLL L +E L L I + I + A L+ +
Sbjct: 265 SVLVRVQCGNSRGLLVRLLSEVEELRLGITHTSVMPFPASTVIITITAKASSLSNHPALL 324
Query: 217 C 217
C
Sbjct: 325 C 325
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 126 (49.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 63 RKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKEL 122
+ VS RS AA H ++ER RR +IN + TL+ L+P ++K DKA++L EVI LK+L
Sbjct: 204 KSSVSTKRSRAAAI-HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQL 262
Query: 123 DKNAMEATEGFLIPTDIDEVKVEQQE 148
+ +P+ + + ++QQ+
Sbjct: 263 QAQVSMMSR-MNMPSMMLPMAMQQQQ 287
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 40/139 (28%), Positives = 81/139 (58%)
Query: 67 SEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNA 126
++++ A+ +H+EAE+ RR+++N LR+++P ++MDKA+LL++ +S ++ L K+
Sbjct: 239 TKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESL-KSK 297
Query: 127 MEATEGFLIPTDIDEVKVEQQEDGLDGA-----PYSIKASLCCNYKPGLLSDLRRVLEAL 181
++ E T+I ++K+ + D LD + P S++ + N KP S+ LE +
Sbjct: 298 IDDLE-----TEIKKMKMTET-DKLDNSSSNTSPSSVEYQV--NQKPSK-SNRGSDLE-V 347
Query: 182 HLSIVKAEIATLEGRMKNI 200
+ IV E A + + +N+
Sbjct: 348 QVKIVGEE-AIIRVQTENV 365
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 77 NHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNA--MEATEGFL 134
+H+ AER RR+++N TLRS++P TKMDK ++L + I+ + L K +E T
Sbjct: 363 SHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQ 422
Query: 135 IPTDIDEVKVEQQED-GLDGAPYSIKASLCCNYKPGLLSDLRRVLEAL 181
K + E+ + + + C Y+ GLL D+ +VL L
Sbjct: 423 QHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHEL 470
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 99 (39.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 67 SEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPG--ATKMDKATLLTEVISQLKELDK 124
S + + HI ERNRR+++N +L LRSL+P + D+A+++ I +KEL++
Sbjct: 81 SREETETQRMTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQ 140
Query: 125 N--AMEATEGFLIP 136
++EA + L+P
Sbjct: 141 QLQSLEAQKRTLLP 154
Score = 64 (27.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 167 KPGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVSSVHQ 226
+PG L + L+AL L+++ + TL+ + ++ ++ E T V + ++VH
Sbjct: 279 RPGQLLKMIAGLQALRLTVLHLNVTTLDSLV--LYTLSVKVEEGCSLTTV-DDIAAAVHH 335
Query: 227 AIRSVLDKFSATEEFLLGA 245
+ ++D +A E LL A
Sbjct: 336 VL-CIVDAEAAASEHLLAA 353
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 21/48 (43%), Positives = 35/48 (72%)
Query: 77 NHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDK 124
NH+EAER RR+++N LR+++P +KMDKA+LL + I+ + ++ K
Sbjct: 320 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQK 367
>UNIPROTKB|K7GSB9 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001067 InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785
PROSITE:PS50888 SMART:SM00353 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CU463875
Ensembl:ENSSSCT00000033419 Uniprot:K7GSB9
Length = 133
Score = 101 (40.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 28/88 (31%), Positives = 42/88 (47%)
Query: 56 EANVKLQR---KGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPG----ATKMDK 108
E N K R +S D+ A +NH E ER RR ++ ++ L ++P A K DK
Sbjct: 46 EGNSKFLRCDDDQMSNDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDK 105
Query: 109 ATLLTEVISQLKELDKNAMEATEGFLIP 136
T+L +S +K L +T+G P
Sbjct: 106 LTILRMAVSHMKSLRGTGNTSTDGTYKP 133
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 119 (46.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 65 GVSEDRSVAAL-KNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELD 123
G S S A + HI AER RR++IN L ++IPG KMDKAT+L++ + +KE+
Sbjct: 179 GGSGSSSAAPYAQEHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQ 238
Query: 124 KNAME 128
+ E
Sbjct: 239 EKLSE 243
Score = 38 (18.4 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 165 NYKPGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMA 204
N G L L +E LHL I + I +MA
Sbjct: 312 NNGKGSLVRLLAAVEGLHLGITHTNVMPFSACTAIITIMA 351
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 119 (46.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 28/82 (34%), Positives = 48/82 (58%)
Query: 50 ERGELVEANVKLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKA 109
++ EL+ ++ ++ S RS + ++HI AER RR+++ L +LIPG KMDKA
Sbjct: 102 KKAELI---IRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKA 158
Query: 110 TLLTEVISQLKELDKNAMEATE 131
++L + I +K L ++ E E
Sbjct: 159 SVLGDAIKHIKYLQESVKEYEE 180
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 120 (47.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 65 GVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKEL 122
G S R A H E+ER RR RIN + TL+ L+P A+K DK ++L +VI LK+L
Sbjct: 158 GRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQL 215
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 122 (48.0 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 55/189 (29%), Positives = 83/189 (43%)
Query: 57 ANVKLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVI 116
AN + G + + + A KN + AER RRK++N L LRS++P +KMD+A++L + I
Sbjct: 318 ANSTVTGDGKGKKKGMPA-KN-LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAI 375
Query: 117 SQLKEL-----D-KNAMEATEGF--LIPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKP 168
LKEL D +N +E++ L PT L P IK +C + P
Sbjct: 376 EYLKELLQKINDLQNELESSPATSSLPPTP---TSFHPLTPTLPTLPSRIKEEICPSALP 432
Query: 169 GLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKE-LNFENTEVCQSLVSSVHQA 227
RV E+ EGR NI + + + L + L V QA
Sbjct: 433 SPTGQQPRV-----------EVRLREGRAVNIHMFCARRPGLLLSAMRAVEGLGLDVQQA 481
Query: 228 IRSVLDKFS 236
+ S + F+
Sbjct: 482 VISCFNGFT 490
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 104 (41.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 67 SEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPG--ATKMDKATLLTEVISQLKELD 123
+E+ + HI ERNRR+++N HL LRSL+P A K D+A+++ I +KEL+
Sbjct: 79 NEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELE 137
Score = 53 (23.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 27/111 (24%), Positives = 52/111 (46%)
Query: 124 KNAMEATEGFLIPTDIDEVKVEQQEDGLDGAPYSIKASLCCNYKPGLLSDLRRVLEALHL 183
K ME E LI T + +++ + G + S KP LS L L++L L
Sbjct: 203 KTPMEDLEVTLIETHAN-IRILSRRRGF-------RWSTLATTKPPQLSKLVASLQSLSL 254
Query: 184 SIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVLDK 234
SI+ + TL+ I+ +++ E + + + V + +VH + S++++
Sbjct: 255 SILHLSVTTLDNYA--IYSISAKVEESCQLSSV-DDIAGAVHHML-SIIEE 301
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 121 (47.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 75 LKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAME 128
+K+H+ +ER RR+++N L+SL+P K+DKA++L E I+ LK L+K E
Sbjct: 376 IKSHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKE 429
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 118 (46.6 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 59 VKLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQ 118
V L V+ + A+ KN I ER+RRKR+N L LR+++P TKMDKA+++ + I+
Sbjct: 80 VNLCSTAVASAAAAASSKN-IAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAH 138
Query: 119 LKELDKNAMEATEGFLIPTDIDEVKVEQQED 149
+++L + + + + V ED
Sbjct: 139 IEKLQEEERQLLDEISVLQSAAAVAATAVED 169
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 122 (48.0 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 73 AALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAME 128
+ +KNH+ +ER RR+++N L+S++P K+DKA++L E I+ LK L+K E
Sbjct: 388 SGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRVKE 443
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 121 (47.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 63 RKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLK-- 120
R G+ RS +A + H +ER RR RIN + L+ LIP K+DKA++L E I LK
Sbjct: 334 RTGLGSKRSRSA-EVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL 392
Query: 121 ELDKNAMEATEGFLIP 136
+L M G+ +P
Sbjct: 393 QLQVQIMSMASGYYLP 408
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 115 (45.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 76 KNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAME 128
KN +EAER RR R+NG++ LR+++P TKM K L++ I +K L +E
Sbjct: 65 KN-LEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEVLE 116
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 116 (45.9 bits), Expect = 0.00013, P = 0.00013
Identities = 48/184 (26%), Positives = 84/184 (45%)
Query: 62 QRKGVSED-RSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLK 120
+RK S RS K H+ AER RR++++ L +L+PG K DK T+L + IS++K
Sbjct: 103 KRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMK 162
Query: 121 ELDKNAMEATEGFLIPTDIDE-VKVEQQEDGLDGAPYSIKASLCCNYKPGLLSDLRRVLE 179
+L + E ++ + V++ + D P +L C+ P + + + L
Sbjct: 163 QLQEQLRTLKEEKEATRQMESMILVKKSKVFFDEEP-----NLSCS--PSVHIEFDQALP 215
Query: 180 ALHLSIVKAEIATL------EGRMKNIFVMASCKELNFENTEVCQSLVSSVHQAIRSVLD 233
+ I + +I +G M NI +L EN+ V S++ + + +D
Sbjct: 216 EIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMD 275
Query: 234 K-FS 236
K FS
Sbjct: 276 KDFS 279
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 113 (44.8 bits), Expect = 0.00030, P = 0.00030
Identities = 46/177 (25%), Positives = 86/177 (48%)
Query: 57 ANVKLQRK-GVSEDRSVA-ALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTE 114
A+V +Q G + A A H+ AER RR++IN L ++IP KMDKAT+L++
Sbjct: 108 ASVAVQEDLGAHGGAAAAYAQLEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSD 167
Query: 115 VISQLKELDKN--AME------ATEGFLI-PTD---IDEVKVEQQEDGLDGAPYS--IKA 160
S ++EL + A+E TE + P+ ++ + V + + + +P + +
Sbjct: 168 AASYIRELQEKLKALEEQAAARVTEAAMATPSPARAMNHLPVPPEIE-VRCSPTNNVVMV 226
Query: 161 SLCCNYKPGLLSDLRRVLEALHLSIVKAEIAT-LEGRMKNIFVMASCKELNFENTEV 216
+ C G++ + +E +HL I+ A + L+ I +A+ ++N +V
Sbjct: 227 RIHCENGEGVIVRILAEVEEIHLRIINANVMPFLDQGATMIITIAAKAKINRSEVKV 283
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 114 (45.2 bits), Expect = 0.00036, P = 0.00036
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 73 AALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKEL-D--KNA-ME 128
A KN + AER RRKR+N L LRS++P +KMD+ ++L + I +KEL D KN +E
Sbjct: 193 APSKN-LMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251
Query: 129 ATEG 132
A G
Sbjct: 252 AATG 255
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 99 (39.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 77 NHIEAERNRRKRINGHLDTLRSLIPG--ATKMDKATLLTEVISQLKELDK--NAMEA 129
+H+ ERNRRK++N HL LRSL+P + D+A+++ V+ + EL + ++EA
Sbjct: 103 SHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159
Score = 53 (23.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 168 PGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSL 220
PG + + LE L L I++ I T++ M N F + E E+ Q +
Sbjct: 307 PGQVMKIIAALEDLALEILQVNINTVDETMLNSFTIKIGIECQLSAEELAQQI 359
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 114 (45.2 bits), Expect = 0.00041, P = 0.00041
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 56 EANVKLQ-----RKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKAT 110
E NV+ Q R S RS AA+ + + +ER RR++IN + L+ L+P TK D+++
Sbjct: 256 ETNVENQGTEEARDSTSSKRSRAAIMHKL-SERRRRQKINEMMKALQELLPRCTKTDRSS 314
Query: 111 LLTEVISQLKELDKNAMEATEGF-LIPTDIDEVKVEQQ 147
+L +VI +K L + G +IP + ++QQ
Sbjct: 315 MLDDVIEYVKSLQSQIQMFSMGHVMIPPMMYAGNIQQQ 352
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 112 (44.5 bits), Expect = 0.00044, P = 0.00044
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 63 RKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKEL 122
R G RS AA + H +E+ RR +IN + L+SLIP + K DKA++L E I LK+L
Sbjct: 94 RGGSGSKRSRAA-EVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQL 152
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 114 (45.2 bits), Expect = 0.00044, P = 0.00044
Identities = 31/65 (47%), Positives = 38/65 (58%)
Query: 58 NVKLQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVIS 117
N QR G S RS AA + H +ER RR RIN + L+ LIP +K DKA++L E I
Sbjct: 244 NKSNQRSG-SNRRSRAA-EVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAID 301
Query: 118 QLKEL 122
LK L
Sbjct: 302 YLKSL 306
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 50 ERGELVEANVKLQRKGVSEDRS---VAALKNHIEAERNRRKRINGHLDTLRSLIPGATKM 106
E GE V + G S S A + H +E+ RR RIN + L+SLIP + K
Sbjct: 171 EGGEAVVDEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKT 230
Query: 107 DKATLLTEVISQLKEL 122
DKA++L E I LK+L
Sbjct: 231 DKASMLDEAIEYLKQL 246
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 108 (43.1 bits), Expect = 0.00045, P = 0.00045
Identities = 31/101 (30%), Positives = 56/101 (55%)
Query: 52 GELVEANVKL-QRKGVSEDRSVAA-LKN-HIEAERNRRKRINGHLDTLRSLIPGATKMDK 108
G + V++ +RK V++++ K+ ++EAER RR++++ L LRS +P T M K
Sbjct: 4 GSRFQEPVRMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTK 63
Query: 109 ATLLTEVISQLKELDKNAMEATEGFL----IPTDIDEVKVE 145
A+++ + I+ + EL N E F P +IDE + +
Sbjct: 64 ASIVEDAITYIGELQNNVKNLLETFHEMEEAPPEIDEEQTD 104
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 110 (43.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 77 NHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAME 128
NH E+ RR+++N TLR +IP K+DK ++L + I L+EL++ E
Sbjct: 441 NHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQE 492
Score = 46 (21.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 162 LCCNYKPGLLSDLRRVLEALHLSIVKAEIATLEG 195
L C ++ G+L ++ V+ LHL + +T +G
Sbjct: 572 LRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDG 605
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 110 (43.8 bits), Expect = 0.00051, P = 0.00051
Identities = 24/61 (39%), Positives = 42/61 (68%)
Query: 71 SVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKEL--DKNAME 128
S A+ KN + +ERNRR+++N L LRS++P +K+DKA+++ + I ++EL + +E
Sbjct: 49 SPASSKN-VVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLE 107
Query: 129 A 129
A
Sbjct: 108 A 108
>UNIPROTKB|F1S6X1 [details] [associations]
symbol:LOC100738978 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CU914667
Ensembl:ENSSSCT00000014635 OMA:KKXILNG Uniprot:F1S6X1
Length = 273
Score = 89 (36.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 74 ALKNHIEAERNRRKRINGHLDTLRSLIPGAT----KMDKATLLTEVISQLKELDKNAMEA 129
A + H + E+ RR ++N +D L SL+P K+DK T+L + +K L
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 130 TEGFLIPTDI--DEVK 143
TE PT + DE+K
Sbjct: 133 TEANYKPTFLSDDELK 148
Score = 59 (25.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 165 NYKPGLLSDLRRVLEALHLSIVKAE-IATLEG--RMKNIFVMASC-KELNF-ENTEVCQS 219
NYKP LSD E HL + A+ + G R K +FV S K LN+ +N + QS
Sbjct: 136 NYKPTFLSDD----ELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQS 191
Query: 220 LVSSVH-QAIRSVLDKFSATE 239
L +H + I V ++ S+++
Sbjct: 192 LFDYLHPKDIAKVKEQLSSSD 212
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 114 (45.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 77 NHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAME 128
NH +E+ RR+++N TLRS+IP +K+DK ++L + I L++L K E
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQE 456
Score = 40 (19.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 162 LCCNYKPGLLSDLRRVLEALHLSIVKAEIATLEG 195
L C ++ G+L ++ V+ L+L + +T +G
Sbjct: 531 LRCAWREGILLEIMDVISDLNLDSHSVQSSTGDG 564
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 96 (38.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 77 NHIEAERNRRKRINGHLDTLRSLIPG--ATKMDKATLLTEVISQLKEL 122
+HI ERNRR+++N HL LRSL P + D+A+++ I +KEL
Sbjct: 2 SHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKEL 49
Score = 47 (21.6 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 177 VLEALHLSIVKAEIATLEGRMKNIFVM 203
+LE+LHL ++ I T++ + FV+
Sbjct: 166 LLESLHLEVLHLNITTMDDTVLYSFVL 192
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 109 (43.4 bits), Expect = 0.00067, P = 0.00067
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 78 HIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNAMEATE 131
H+EAER RR+++N LR+ +P ++MDKA+LL + + + EL + +E E
Sbjct: 95 HVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAEL-RRRVERLE 147
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 110 (43.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 69 DRSVAALKNHIEAERNRRKRINGHLDTLRSLIPG--ATKMDKATLLTEVISQLKELDK-- 124
D AA +HI ERNRRK++N HL LRSL+P + D+A+++ V+ +KEL +
Sbjct: 125 DGDGAAKMSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVL 184
Query: 125 NAMEA 129
++EA
Sbjct: 185 RSLEA 189
Score = 39 (18.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 13/53 (24%), Positives = 21/53 (39%)
Query: 168 PGLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKELNFENTEVCQSL 220
PG + LE+L L I+ I T++ F + E E+ Q +
Sbjct: 358 PGQALKIIAALESLSLEILHVSICTVDDATVLSFTIKIGIECELSAEELVQEI 410
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 98 (39.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 77 NHIEAERNRRKRINGHLDTLRSLIPG--ATKMDKATLLTEVISQLKELDK 124
+HI ERNRR+++N HL +LRSL P + D+A+++ VI +KEL +
Sbjct: 2 SHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQ 51
Score = 41 (19.5 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 169 GLLSDLRRVLEALHLSIVKAEIATLEGRMKNIFVMASCKE--LNFENT--EVCQSLVS 222
G L + VLE L ++ I+++E + FV+ E L+ E EV +S VS
Sbjct: 137 GQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHLSLEELTLEVQKSFVS 194
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 113 (44.8 bits), Expect = 0.00085, P = 0.00085
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 61 LQRKGVSEDRSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLK 120
L++ G + + H +ER RR RIN + L+ LIP K+DKA++L E I LK
Sbjct: 300 LRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLK 359
Query: 121 --ELDKNAMEATEGFLIP 136
+L M G IP
Sbjct: 360 TLQLQVQMMSMGTGLCIP 377
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 109 (43.4 bits), Expect = 0.00088, P = 0.00088
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 70 RSVAALKNHIEAERNRRKRINGHLDTLRSLIPGATKMDKATLLTEVISQLKELDKNA--M 127
RS AA + H +E+ RR RIN + L+SLIP ++K DKA++L + I LK+L +
Sbjct: 30 RSRAA-EVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 88
Query: 128 EATEG-FLIPTDI----DEVKVEQQEDGLDGAPYSIKAS 161
G +L P ++ + + + Q LD S KAS
Sbjct: 89 SMRNGLYLPPVNLSGAPEHLPIPQMSAALD--QNSAKAS 125
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 269 242 0.00096 113 3 11 22 0.44 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 583 (62 KB)
Total size of DFA: 165 KB (2098 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.54u 0.13s 23.67t Elapsed: 00:00:01
Total cpu time: 23.55u 0.13s 23.68t Elapsed: 00:00:01
Start: Fri May 10 00:31:32 2013 End: Fri May 10 00:31:33 2013