Citrus Sinensis ID: 024328

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVRIS
cHHHHHcccHHHcccccccccHHHHHHHHHHHcccccccccHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEEEEEccccHHHHHHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHcccccccccccccHHHHHHHHHcccccccc
cHHHHHcccEEEEEEHHHcccHHHHHHHHHHcccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccEEEEEEEcccHcHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEHHccccHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHccccEEEc
mewfasmpkvelhahlngsirDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLElrttpkrnesigmskRSYMDAVVEGLRAVSAVdvdfasrsidvrrpvntknmndacngtrgKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVgidlsgnptkgewttFLPALKFAREQGLQITlhcgeipnkEEIQSMLDFLpqrighaccfEEEEWRklksskipvris
MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVedfasenivylelrttpkrnesigmsKRSYMDAVVEGLRAVsavdvdfasrsidvrrpvntknmndacngtrgkkIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEeeewrklksskipvris
MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVRIS
*********VELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTT************SYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWR************
MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVRIS
********KVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEE**************
MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASR******PVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVRIS
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MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDFLPQRIGHACCFEEEEWRKLKSSKIPVRIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query269 2.2.26 [Sep-21-2011]
Q295P6340 Adenosine deaminase-like yes no 0.869 0.688 0.387 1e-39
Q6DHV7 355 Adenosine deaminase-like no no 0.802 0.608 0.373 2e-39
Q0VC13351 Adenosine deaminase-like yes no 0.825 0.632 0.368 5e-39
Q80SY6 360 Adenosine deaminase-like yes no 0.832 0.622 0.356 5e-38
Q9VHH7337 Adenosine deaminase-like yes no 0.873 0.697 0.332 3e-35
Q4V831347 Adenosine deaminase-like N/A no 0.791 0.613 0.355 1e-34
Q4V9P6348 Adenosine deaminase-like yes no 0.788 0.609 0.346 6e-33
Q0SQ45332 Adenosine deaminase OS=Cl yes no 0.836 0.677 0.277 8e-20
Q8XHH8332 Adenosine deaminase OS=Cl yes no 0.851 0.689 0.281 1e-19
C3L357331 Adenosine deaminase OS=Cl yes no 0.862 0.700 0.269 2e-19
>sp|Q295P6|ADAL_DROPS Adenosine deaminase-like protein OS=Drosophila pseudoobscura pseudoobscura GN=GA11319 PE=3 SV=2 Back     alignment and function desciption
 Score =  163 bits (412), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/271 (38%), Positives = 149/271 (54%), Gaps = 37/271 (13%)

Query: 2   EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDV--EHVIMKSDRSLHEVFK 59
           ++   MPKVELHAHLNGS+  ++L +LA  +       FS +    V  + D +L + F+
Sbjct: 3   KFLKEMPKVELHAHLNGSLNTNSLQDLAEKVYGNTSEEFSHLCARFVNFEKDSNLDKCFE 62

Query: 60  LFDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEG 119
            F  +H LT+  A +   T+ V+ DFA++NI YLELRTTPK N++    +R Y+  V++ 
Sbjct: 63  KFAFVHELTSTAAGLQYATELVIRDFANDNIQYLELRTTPKANKN--YLRRDYLRIVLDT 120

Query: 120 LRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETV 179
           ++          SR                    +   I V+LL SI+R E    A ETV
Sbjct: 121 IKR---------SRK-------------------KYPNILVKLLPSINRSEPVAVAEETV 152

Query: 180 KLALEMR----DLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQ 235
            LALE      DL VVGIDLSG PTKG++T F  AL  AR +GL++ +HC EI N  EI+
Sbjct: 153 ALALEFAKTDPDL-VVGIDLSGIPTKGKFTDFCGALDLARREGLKLVIHCAEIDNPPEIK 211

Query: 236 SMLDFLPQRIGHACCFEEEEWRKLKSSKIPV 266
            ML F   R GH     EE++ ++K++ IP+
Sbjct: 212 EMLSFGMSRCGHGTYLTEEDFAQMKAANIPI 242
Putative nucleoside deaminase. May catalyze the hydrolytic deamination of adenosine or some similar substrate and play a role in purine metabolism.
Drosophila pseudoobscura pseudoobscura (taxid: 46245)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: -
>sp|Q6DHV7|ADAL_HUMAN Adenosine deaminase-like protein OS=Homo sapiens GN=ADAL PE=2 SV=2 Back     alignment and function description
>sp|Q0VC13|ADAL_BOVIN Adenosine deaminase-like protein OS=Bos taurus GN=ADAL PE=2 SV=1 Back     alignment and function description
>sp|Q80SY6|ADAL_MOUSE Adenosine deaminase-like protein OS=Mus musculus GN=Adal PE=2 SV=1 Back     alignment and function description
>sp|Q9VHH7|ADAL_DROME Adenosine deaminase-like protein OS=Drosophila melanogaster GN=Ada PE=2 SV=1 Back     alignment and function description
>sp|Q4V831|ADALA_XENLA Adenosine deaminase-like protein A OS=Xenopus laevis GN=adal-a PE=2 SV=1 Back     alignment and function description
>sp|Q4V9P6|ADAL_DANRE Adenosine deaminase-like protein OS=Danio rerio GN=adal PE=2 SV=1 Back     alignment and function description
>sp|Q0SQ45|ADD_CLOPS Adenosine deaminase OS=Clostridium perfringens (strain SM101 / Type A) GN=add PE=3 SV=1 Back     alignment and function description
>sp|Q8XHH8|ADD_CLOPE Adenosine deaminase OS=Clostridium perfringens (strain 13 / Type A) GN=add PE=3 SV=1 Back     alignment and function description
>sp|C3L357|ADD_CLOB6 Adenosine deaminase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=add PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query269
224142856363 predicted protein [Populus trichocarpa] 0.996 0.738 0.817 1e-127
255554947364 Adenosine deaminase, putative [Ricinus c 0.996 0.736 0.806 1e-124
147833191355 hypothetical protein VITISV_030807 [Viti 0.966 0.732 0.783 1e-119
359483383359 PREDICTED: adenosine deaminase-like prot 0.966 0.724 0.783 1e-118
297813867355 adenosine/AMP deaminase family protein [ 0.970 0.735 0.761 1e-116
449479433363 PREDICTED: LOW QUALITY PROTEIN: adenosin 0.996 0.738 0.727 1e-115
449433942363 PREDICTED: adenosine deaminase-like prot 0.996 0.738 0.727 1e-115
22328354355 adenosine deaminase [Arabidopsis thalian 0.970 0.735 0.742 1e-114
356521975363 PREDICTED: adenosine deaminase-like prot 0.992 0.735 0.738 1e-113
357480235 376 Adenosine deaminase-like protein [Medica 0.996 0.712 0.735 1e-112
>gi|224142856|ref|XP_002335976.1| predicted protein [Populus trichocarpa] gi|222836542|gb|EEE74949.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/268 (81%), Positives = 243/268 (90%)

Query: 1   MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKL 60
           MEW+ SMPK+ELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMK+DRSL EVFKL
Sbjct: 1   MEWWVSMPKIELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKNDRSLGEVFKL 60

Query: 61  FDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGL 120
           FDLIH+LTTDH TVTRIT+EVVEDFASEN+VYLELRTTPK+N+SIGMSK SYM+AVVEGL
Sbjct: 61  FDLIHILTTDHKTVTRITKEVVEDFASENVVYLELRTTPKKNDSIGMSKHSYMEAVVEGL 120

Query: 121 RAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVK 180
           RAV+AVD+DF     + +  +N+  MNDAC+GT+ KKIYVRLLLSIDRRETTEAA+ETVK
Sbjct: 121 RAVTAVDIDFVPHKFNTQDSLNSIAMNDACDGTKKKKIYVRLLLSIDRRETTEAAIETVK 180

Query: 181 LALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDF 240
           LALEMRDLGVVGIDLSGNP  GEW TFLPALKFA+EQGL ITLHCGE+ N +E+Q MLDF
Sbjct: 181 LALEMRDLGVVGIDLSGNPVVGEWNTFLPALKFAQEQGLYITLHCGEVLNCQEVQPMLDF 240

Query: 241 LPQRIGHACCFEEEEWRKLKSSKIPVRI 268
           LPQRIGHA  FEEEEWR+LK+SKIPV I
Sbjct: 241 LPQRIGHAIFFEEEEWRQLKTSKIPVEI 268

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255554947|ref|XP_002518511.1| Adenosine deaminase, putative [Ricinus communis] gi|223542356|gb|EEF43898.1| Adenosine deaminase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147833191|emb|CAN68640.1| hypothetical protein VITISV_030807 [Vitis vinifera] gi|302144084|emb|CBI23189.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359483383|ref|XP_002265831.2| PREDICTED: adenosine deaminase-like protein [Vitis vinifera] Back     alignment and taxonomy information
>gi|297813867|ref|XP_002874817.1| adenosine/AMP deaminase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320654|gb|EFH51076.1| adenosine/AMP deaminase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449479433|ref|XP_004155598.1| PREDICTED: LOW QUALITY PROTEIN: adenosine deaminase-like protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449433942|ref|XP_004134755.1| PREDICTED: adenosine deaminase-like protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|22328354|ref|NP_192397.2| adenosine deaminase [Arabidopsis thaliana] gi|20466195|gb|AAM20415.1| putative adenosine deaminase [Arabidopsis thaliana] gi|24899837|gb|AAN65133.1| putative adenosine deaminase [Arabidopsis thaliana] gi|332657036|gb|AEE82436.1| adenosine deaminase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356521975|ref|XP_003529625.1| PREDICTED: adenosine deaminase-like protein-like [Glycine max] Back     alignment and taxonomy information
>gi|357480235|ref|XP_003610403.1| Adenosine deaminase-like protein [Medicago truncatula] gi|355511458|gb|AES92600.1| Adenosine deaminase-like protein [Medicago truncatula] gi|388499194|gb|AFK37663.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query269
TAIR|locus:2138967355 AT4G04880 "AT4G04880" [Arabido 0.970 0.735 0.742 2.3e-103
UNIPROTKB|Q8H3U7368 P0496C02.124 "Os07g0661000 pro 0.973 0.711 0.652 2.5e-90
UNIPROTKB|E2RSY5356 ADAL "Uncharacterized protein" 0.475 0.359 0.386 6.7e-43
UNIPROTKB|Q295P6340 GA11319 "Adenosine deaminase-l 0.438 0.347 0.472 4.1e-41
UNIPROTKB|Q6DHV7355 ADAL "Adenosine deaminase-like 0.479 0.363 0.376 5.2e-41
UNIPROTKB|A8J7C2461 CHLREDRAFT_175699 "Predicted p 0.412 0.240 0.513 1.1e-40
UNIPROTKB|F1LRK5360 LOC311352 "Protein LOC311352" 0.483 0.361 0.357 1.4e-40
MGI|MGI:1923144360 Adal "adenosine deaminase-like 0.483 0.361 0.357 9.4e-40
ZFIN|ZDB-GENE-050913-145348 adal "adenosine deaminase-like 0.449 0.347 0.345 5.7e-35
UNIPROTKB|J9P4E5328 ADAL "Uncharacterized protein" 0.475 0.390 0.386 3.8e-31
TAIR|locus:2138967 AT4G04880 "AT4G04880" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
 Identities = 199/268 (74%), Positives = 234/268 (87%)

Query:     1 MEWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKL 60
             MEW  S+PK+ELHAHLNGSIRDSTLLELARVLGEKGVIVF+DVEHVI K+DRSL EVFKL
Sbjct:     1 MEWIQSLPKIELHAHLNGSIRDSTLLELARVLGEKGVIVFADVEHVIQKNDRSLVEVFKL 60

Query:    61 FDLIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGL 120
             FDLIH LTTDH TVTRIT+EVVEDFA EN+VYLELRTTPKR++SIGMSKRSYM+AV++GL
Sbjct:    61 FDLIHKLTTDHKTVTRITREVVEDFALENVVYLELRTTPKRSDSIGMSKRSYMEAVIQGL 120

Query:   121 RAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMETVK 180
             R+VS VD+DF + S       +++ +++A +G   KKIYVRLLLSIDRRETTE+AMETVK
Sbjct:   121 RSVSEVDIDFVTAS-------DSQKLHNAGDGIGRKKIYVRLLLSIDRRETTESAMETVK 173

Query:   181 LALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEEIQSMLDF 240
             LALEMRD+GVVGIDLSGNP  GEW+TFLPAL++A++  L ITLHCGE+PN +EIQ+MLDF
Sbjct:   174 LALEMRDVGVVGIDLSGNPLVGEWSTFLPALQYAKDNDLHITLHCGEVPNPKEIQAMLDF 233

Query:   241 LPQRIGHACCFEEEEWRKLKSSKIPVRI 268
              P RIGHAC F++E+W KLKS +IPV I
Sbjct:   234 KPHRIGHACFFKDEDWTKLKSFRIPVEI 261
GO:0004000 "adenosine deaminase activity" evidence=IBA
GO:0005737 "cytoplasm" evidence=IBA
GO:0006154 "adenosine catabolic process" evidence=IBA
GO:0009168 "purine ribonucleoside monophosphate biosynthetic process" evidence=IEA;ISS
GO:0019239 "deaminase activity" evidence=IEA;ISS
UNIPROTKB|Q8H3U7 P0496C02.124 "Os07g0661000 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|E2RSY5 ADAL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q295P6 GA11319 "Adenosine deaminase-like protein" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] Back     alignment and assigned GO terms
UNIPROTKB|Q6DHV7 ADAL "Adenosine deaminase-like protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A8J7C2 CHLREDRAFT_175699 "Predicted protein" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
UNIPROTKB|F1LRK5 LOC311352 "Protein LOC311352" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1923144 Adal "adenosine deaminase-like" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050913-145 adal "adenosine deaminase-like" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|J9P4E5 ADAL "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.4LOW CONFIDENCE prediction!
3rd Layer3.5.4.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query269
cd00443305 cd00443, ADA_AMPD, Adenosine/AMP deaminase 1e-53
cd01320325 cd01320, ADA, Adenosine deaminase (ADA) is a monom 3e-39
PRK09358340 PRK09358, PRK09358, adenosine deaminase; Provision 2e-37
TIGR01430324 TIGR01430, aden_deam, adenosine deaminase 9e-32
COG1816345 COG1816, Add, Adenosine deaminase [Nucleotide tran 2e-26
pfam00962328 pfam00962, A_deaminase, Adenosine/AMP deaminase 2e-20
PTZ00124362 PTZ00124, PTZ00124, adenosine deaminase; Provision 8e-07
cd01292275 cd01292, metallo-dependent_hydrolases, Superfamily 7e-05
cd01321345 cd01321, ADGF, Adenosine deaminase-related growth 0.004
>gnl|CDD|238250 cd00443, ADA_AMPD, Adenosine/AMP deaminase Back     alignment and domain information 
 Score =  175 bits (446), Expect = 1e-53
 Identities = 94/273 (34%), Positives = 126/273 (46%), Gaps = 63/273 (23%)

Query: 7   MPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVIMKSDRSLHEVFKLFDLIHV 66
           +PKVELHAHL+GSI   TLLEL     +K                    E F+ F L+H 
Sbjct: 1   LPKVELHAHLSGSISPETLLEL----IKK--------------------EFFEKFLLVHN 36

Query: 67  LTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNE-SIGMSKRSYMDAVVEGLRAVSA 125
           L      + R  +EV+E+FA +N+ YLELRTTP+  E   G++K  Y   V+EG+     
Sbjct: 37  LLQKGEALARALKEVIEEFAEDNVQYLELRTTPRLLETEKGLTKEQYWLLVIEGISEAKQ 96

Query: 126 VDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRET----TEAAMETVKL 181
                                           I VRL+LS+DRR         A E ++L
Sbjct: 97  W----------------------------FPPIKVRLILSVDRRGPYVQNYLVASEILEL 128

Query: 182 ALEMRDLGVVGIDLSGNPTKGE--WTTFLPALKFAREQG-LQITLHCGEIPNKEEIQSML 238
           A  + +  VVGIDL G+ +KGE     F    ++AR  G L +TLHCGE  N+EE+   L
Sbjct: 129 AKFLSN-YVVGIDLVGDESKGENPLRDFYSYYEYARRLGLLGLTLHCGETGNREELLQAL 187

Query: 239 DFLPQRIGHACC--FEEEEWRKLKSSKIPVRIS 269
             LP RIGH        E    +K   IP+ + 
Sbjct: 188 LLLPDRIGHGIFLLKHPELIYLVKLRNIPIEVC 220

Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway. Length = 305
>gnl|CDD|238645 cd01320, ADA, Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively Back     alignment and domain information
>gnl|CDD|236480 PRK09358, PRK09358, adenosine deaminase; Provisional Back     alignment and domain information
>gnl|CDD|233410 TIGR01430, aden_deam, adenosine deaminase Back     alignment and domain information
>gnl|CDD|224729 COG1816, Add, Adenosine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|216216 pfam00962, A_deaminase, Adenosine/AMP deaminase Back     alignment and domain information
>gnl|CDD|173415 PTZ00124, PTZ00124, adenosine deaminase; Provisional Back     alignment and domain information
>gnl|CDD|238617 cd01292, metallo-dependent_hydrolases, Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>gnl|CDD|238646 cd01321, ADGF, Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 269
PTZ00124362 adenosine deaminase; Provisional 100.0
cd01321345 ADGF Adenosine deaminase-related growth factors (A 100.0
KOG1097 399 consensus Adenine deaminase/adenosine deaminase [N 100.0
PF00962331 A_deaminase: Adenosine/AMP deaminase immunodeficie 100.0
cd00443305 ADA_AMPD Adenosine/AMP deaminase. Adenosine deamin 100.0
COG1816345 Add Adenosine deaminase [Nucleotide transport and 100.0
PRK09358340 adenosine deaminase; Provisional 100.0
TIGR01431 479 adm_rel adenosine deaminase-related growth factor. 100.0
TIGR01430324 aden_deam adenosine deaminase. This family include 100.0
cd01320325 ADA Adenosine deaminase (ADA) is a monomeric zinc 100.0
cd01319 496 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic 99.69
TIGR01224 377 hutI imidazolonepropionase. This enzyme catalyzes 99.65
TIGR01429 611 AMP_deaminase AMP deaminase. This model describes 99.61
PLN03055 602 AMP deaminase; Provisional 99.6
PLN02768 835 AMP deaminase 99.6
PTZ00310 1453 AMP deaminase; Provisional 99.55
cd01296 371 Imidazolone-5PH Imidazolonepropionase/imidazolone- 99.51
PRK09230 426 cytosine deaminase; Provisional 99.27
PRK09356 406 imidazolonepropionase; Validated 98.91
PTZ00310 1453 AMP deaminase; Provisional 98.85
cd01292275 metallo-dependent_hydrolases Superfamily of metall 98.81
cd01298 411 ATZ_TRZ_like TRZ/ATZ family contains enzymes from 98.76
PRK08393 424 N-ethylammeline chlorohydrolase; Provisional 98.75
cd01305263 archeal_chlorohydrolases Predicted chlorohydrolase 98.53
cd01293 398 Bact_CD Bacterial cytosine deaminase and related m 98.47
PRK07583 438 cytosine deaminase-like protein; Validated 98.14
PRK08204 449 hypothetical protein; Provisional 97.91
cd01299 342 Met_dep_hydrolase_A Metallo-dependent hydrolases, 97.89
PRK14085 382 imidazolonepropionase; Provisional 97.86
PRK07213 375 chlorohydrolase; Provisional 97.84
PRK06886329 hypothetical protein; Validated 97.81
KOG1096 768 consensus Adenosine monophosphate deaminase [Nucle 97.79
PRK06687 419 chlorohydrolase; Validated 97.74
cd01313 418 Met_dep_hydrolase_E Metallo-dependent hydrolases, 97.73
PRK08203 451 hydroxydechloroatrazine ethylaminohydrolase; Revie 97.67
PRK09228 433 guanine deaminase; Provisional 97.62
cd01303 429 GDEase Guanine deaminase (GDEase). Guanine deamina 97.61
TIGR02022 455 hutF formiminoglutamate deiminase. In some species 97.61
TIGR02967 401 guan_deamin guanine deaminase. This model describe 97.61
PRK06380 418 metal-dependent hydrolase; Provisional 97.57
PRK05985 391 cytosine deaminase; Provisional 97.56
PRK06038 430 N-ethylammeline chlorohydrolase; Provisional 97.55
TIGR03314 441 Se_ssnA putative selenium metabolism protein SsnA. 97.54
PRK12393 457 amidohydrolase; Provisional 97.53
PRK09229 456 N-formimino-L-glutamate deiminase; Validated 97.4
PRK07203 442 putative chlorohydrolase/aminohydrolase; Validated 97.25
PRK07572 426 cytosine deaminase; Validated 97.23
PRK15493 435 5-methylthioadenosine/S-adenosylhomocysteine deami 97.15
cd01312 381 Met_dep_hydrolase_D Metallo-dependent hydrolases, 97.11
PRK07228 445 N-ethylammeline chlorohydrolase; Provisional 96.87
PRK08418 408 chlorohydrolase; Provisional 96.63
PRK06846 410 putative deaminase; Validated 96.03
PRK09045 443 N-ethylammeline chlorohydrolase; Provisional 95.93
PRK06151 488 N-ethylammeline chlorohydrolase; Provisional 95.83
cd03174265 DRE_TIM_metallolyase DRE-TIM metallolyase superfam 95.66
cd07948262 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate s 95.48
COG0402 421 SsnA Cytosine deaminase and related metal-dependen 95.02
cd07939259 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and 94.91
cd01300 479 YtcJ_like YtcJ_like metal dependent amidohydrolase 94.91
TIGR02090 363 LEU1_arch isopropylmalate/citramalate/homocitrate 94.84
PRK05692287 hydroxymethylglutaryl-CoA lyase; Provisional 94.8
PRK14042 596 pyruvate carboxylase subunit B; Provisional 94.26
PRK11858 378 aksA trans-homoaconitate synthase; Reviewed 94.18
TIGR00010252 hydrolase, TatD family. Several genomes have multi 93.91
cd07938274 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, 93.68
cd01310251 TatD_DNAse TatD like proteins; E.coli TatD is a cy 93.41
cd07940268 DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N- 93.1
cd07945280 DRE_TIM_CMS Leptospira interrogans citramalate syn 93.07
cd07941273 DRE_TIM_LeuA3 Desulfobacterium autotrophicum LeuA3 92.92
PF00682237 HMGL-like: HMGL-like of this family is not conserv 92.63
TIGR02660 365 nifV_homocitr homocitrate synthase NifV. This fami 92.62
COG1228 406 HutI Imidazolonepropionase and related amidohydrol 92.47
PRK08195337 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic ac 91.88
PRK09389 488 (R)-citramalate synthase; Provisional 91.64
PF07969 404 Amidohydro_3: Amidohydrolase family; InterPro: IPR 91.57
PRK12581 468 oxaloacetate decarboxylase; Provisional 91.47
PRK12331 448 oxaloacetate decarboxylase; Provisional 91.25
PLN02746347 hydroxymethylglutaryl-CoA lyase 91.08
TIGR03217333 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase. 91.07
PRK15108 345 biotin synthase; Provisional 91.03
PRK14041 467 oxaloacetate decarboxylase; Provisional 90.21
PRK07094 323 biotin synthase; Provisional 89.84
cd01306 325 PhnM PhnM is believed to be a subunit of the membr 89.63
TIGR01108 582 oadA oxaloacetate decarboxylase alpha subunit. Thi 89.41
PRK09282 592 pyruvate carboxylase subunit B; Validated 88.81
cd07937275 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcar 88.52
cd07944266 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase- 88.31
COG1099254 Predicted metal-dependent hydrolases with the TIM- 88.25
cd07943263 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-te 87.75
PRK13207 568 ureC urease subunit alpha; Reviewed 87.41
TIGR03278 404 methan_mark_10 putative methanogenesis marker prot 87.09
cd00530293 PTE Phosphotriesterase (PTE) catalyzes the hydroly 87.07
TIGR01496 257 DHPS dihydropteroate synthase. This model represen 86.84
TIGR00433 296 bioB biotin synthetase. Catalyzes the last step of 86.77
PRK06256 336 biotin synthase; Validated 86.51
PRK06740331 histidinol-phosphatase; Validated 86.28
PRK12344 524 putative alpha-isopropylmalate/homocitrate synthas 85.87
PF0818714 Tetradecapep: Myoactive tetradecapeptides family; 85.64
COG0119 409 LeuA Isopropylmalate/homocitrate/citramalate synth 85.46
PRK00915 513 2-isopropylmalate synthase; Validated 85.28
PRK12330 499 oxaloacetate decarboxylase; Provisional 85.19
PRK05265239 pyridoxine 5'-phosphate synthase; Provisional 84.12
PRK14024 241 phosphoribosyl isomerase A; Provisional 83.53
COG1574 535 Predicted metal-dependent hydrolase with the TIM-b 83.25
PRK06801 286 hypothetical protein; Provisional 82.61
PLN03228 503 methylthioalkylmalate synthase; Provisional 82.47
cd01335204 Radical_SAM Radical SAM superfamily. Enzymes of th 81.89
PRK14040 593 oxaloacetate decarboxylase; Provisional 81.67
TIGR00973 494 leuA_bact 2-isopropylmalate synthase, bacterial ty 81.41
PRK00507221 deoxyribose-phosphate aldolase; Provisional 81.32
PRK10812265 putative DNAse; Provisional 81.11
>PTZ00124 adenosine deaminase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.4e-55  Score=406.06  Aligned_cols=235  Identities=22%  Similarity=0.303  Sum_probs=208.3

Q ss_pred             hhhhcCCcchhccccCCCCCHHHHHHHHHHhccCCCccchhhHHHH-----hhcCCCHHHHHHHhHHHHHhhCCHHHHHH
Q 024328            2 EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSDVEHVI-----MKSDRSLHEVFKLFDLIHVLTTDHATVTR   76 (269)
Q Consensus         2 ~~i~~lPK~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~~~~~~~~-----~~~~~~l~~f~~~f~~~~~l~~~~~~~~~   76 (269)
                      +|+++|||+|||+||+||++|+|+++||++   +|+.++.+.+++.     ...+.+|.+||+.|..+..++++++++++
T Consensus        30 ~~~~~lPKvELH~HLdGsi~~~tl~~La~~---~~~~~~~~~~~l~~~~~~~~~~~~L~~fl~~f~~~~~vl~t~~dl~r  106 (362)
T PTZ00124         30 KIWKRIPKCELHCHLDLCFSVDFFLSCIRK---YNLQPNLSDEEILDYYLFAKGGKSLGEFVEKAIRVADIFNDYEVIED  106 (362)
T ss_pred             HHHhcCCceeEeecccCCCCHHHHHHHHHH---cCCCCCCCHHHHHHHHhcccCCCCHHHHHHHHHHHHHHhCCHHHHHH
Confidence            689999999999999999999999999985   6665544433332     13467999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCeEEEEecCCCCc-ccCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCC
Q 024328           77 ITQEVVEDFASENIVYLELRTTPKRN-ESIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRG  155 (269)
Q Consensus        77 ~~~~~~~~~~~dnV~Y~Elr~~p~~~-~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (269)
                      +++++++++++|||+|+|+||+|..+ ..+|++.+++++++++|++++++                           ..+
T Consensus       107 ~a~e~~~d~~~dgV~Y~Eir~~P~~~~~~~gl~~~~vv~av~~g~~~a~~---------------------------~~~  159 (362)
T PTZ00124        107 LAKHAVFNKYKEGVVLMEFRYSPTFVAFKHNLDIDLIHQAIVKGIKEAVE---------------------------LLD  159 (362)
T ss_pred             HHHHHHHHHHHcCCEEEEEEcCchhhhcCCCCCHHHHHHHHHHHHHHHHh---------------------------ccC
Confidence            99999999999999999999999764 46789999999999999998743                           225


Q ss_pred             CCceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCCh---h
Q 024328          156 KKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNK---E  232 (269)
Q Consensus       156 ~~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~---e  232 (269)
                      +||.+|+|+|++|+.+++.+.+++++|.++++. ||||||+|+|..  +..|.++|++||+.|+++|+||||..++   +
T Consensus       160 ~gI~~~lI~~~~R~~~~e~a~e~~~~a~~~~~~-vvGiDLaG~E~~--~~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~~  236 (362)
T PTZ00124        160 HKIEVGLLCIGDTGHDAAPIKESADFCLKHKAD-FVGFDHAGHEVD--LKPFKDIFDYVREAGVNLTVHAGEDVTLPNLN  236 (362)
T ss_pred             CCceEeEEEEecCCCCHHHHHHHHHHHHhccCC-eEEEeccCCCCC--cHHHHHHHHHHHHCCCCEEEEeCCCCCCCcch
Confidence            799999999999999999999999999998775 999999999985  3679999999999999999999998543   4


Q ss_pred             HHHHHHh-cCCCcccccccC--CHHHHHHHHhCCCceeeC
Q 024328          233 EIQSMLD-FLPQRIGHACCF--EEEEWRKLKSSKIPVRIS  269 (269)
Q Consensus       233 ~i~~ai~-l~a~RIGHG~~~--~~~l~~~l~~~~I~lEic  269 (269)
                      ++++|+. +|++|||||+++  +|++++++++++|+||||
T Consensus       237 ~v~~ai~~l~~~RIGHG~~~~~d~~l~~~l~~~~I~lEvC  276 (362)
T PTZ00124        237 TLYSAIQVLKVKRIGHGIRVAESQELIDMVKEKDILLEVC  276 (362)
T ss_pred             hHHHHHHHhCCCccccccccCCCHHHHHHHHHcCCeEEEC
Confidence            6787886 899999999987  699999999999999999

>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase Back     alignment and domain information
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3 Back     alignment and domain information
>cd00443 ADA_AMPD Adenosine/AMP deaminase Back     alignment and domain information
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK09358 adenosine deaminase; Provisional Back     alignment and domain information
>TIGR01431 adm_rel adenosine deaminase-related growth factor Back     alignment and domain information
>TIGR01430 aden_deam adenosine deaminase Back     alignment and domain information
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively Back     alignment and domain information
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring Back     alignment and domain information
>TIGR01224 hutI imidazolonepropionase Back     alignment and domain information
>TIGR01429 AMP_deaminase AMP deaminase Back     alignment and domain information
>PLN03055 AMP deaminase; Provisional Back     alignment and domain information
>PLN02768 AMP deaminase Back     alignment and domain information
>PTZ00310 AMP deaminase; Provisional Back     alignment and domain information
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate Back     alignment and domain information
>PRK09230 cytosine deaminase; Provisional Back     alignment and domain information
>PRK09356 imidazolonepropionase; Validated Back     alignment and domain information
>PTZ00310 AMP deaminase; Provisional Back     alignment and domain information
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases Back     alignment and domain information
>PRK08393 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases Back     alignment and domain information
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases Back     alignment and domain information
>PRK07583 cytosine deaminase-like protein; Validated Back     alignment and domain information
>PRK08204 hypothetical protein; Provisional Back     alignment and domain information
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>PRK14085 imidazolonepropionase; Provisional Back     alignment and domain information
>PRK07213 chlorohydrolase; Provisional Back     alignment and domain information
>PRK06886 hypothetical protein; Validated Back     alignment and domain information
>KOG1096 consensus Adenosine monophosphate deaminase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK06687 chlorohydrolase; Validated Back     alignment and domain information
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed Back     alignment and domain information
>PRK09228 guanine deaminase; Provisional Back     alignment and domain information
>cd01303 GDEase Guanine deaminase (GDEase) Back     alignment and domain information
>TIGR02022 hutF formiminoglutamate deiminase Back     alignment and domain information
>TIGR02967 guan_deamin guanine deaminase Back     alignment and domain information
>PRK06380 metal-dependent hydrolase; Provisional Back     alignment and domain information
>PRK05985 cytosine deaminase; Provisional Back     alignment and domain information
>PRK06038 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA Back     alignment and domain information
>PRK12393 amidohydrolase; Provisional Back     alignment and domain information
>PRK09229 N-formimino-L-glutamate deiminase; Validated Back     alignment and domain information
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated Back     alignment and domain information
>PRK07572 cytosine deaminase; Validated Back     alignment and domain information
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional Back     alignment and domain information
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site Back     alignment and domain information
>PRK07228 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>PRK08418 chlorohydrolase; Provisional Back     alignment and domain information
>PRK06846 putative deaminase; Validated Back     alignment and domain information
>PRK09045 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>PRK06151 N-ethylammeline chlorohydrolase; Provisional Back     alignment and domain information
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily Back     alignment and domain information
>cd07948 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only] Back     alignment and domain information
>cd07939 DRE_TIM_NifV Streptomyces rubellomurinus FrbC and related proteins, catalytic TIM barrel domain Back     alignment and domain information
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases Back     alignment and domain information
>TIGR02090 LEU1_arch isopropylmalate/citramalate/homocitrate synthases Back     alignment and domain information
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional Back     alignment and domain information
>PRK14042 pyruvate carboxylase subunit B; Provisional Back     alignment and domain information
>PRK11858 aksA trans-homoaconitate synthase; Reviewed Back     alignment and domain information
>TIGR00010 hydrolase, TatD family Back     alignment and domain information
>cd07938 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain Back     alignment and domain information
>cd01310 TatD_DNAse TatD like proteins; E Back     alignment and domain information
>cd07940 DRE_TIM_IPMS 2-isopropylmalate synthase (IPMS), N-terminal catalytic TIM barrel domain Back     alignment and domain information
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>cd07941 DRE_TIM_LeuA3 Desulfobacterium autotrophicum LeuA3 and related proteins, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>PF00682 HMGL-like: HMGL-like of this family is not conserved in other members Back     alignment and domain information
>TIGR02660 nifV_homocitr homocitrate synthase NifV Back     alignment and domain information
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated Back     alignment and domain information
>PRK09389 (R)-citramalate synthase; Provisional Back     alignment and domain information
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ] Back     alignment and domain information
>PRK12581 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>PRK12331 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>PLN02746 hydroxymethylglutaryl-CoA lyase Back     alignment and domain information
>TIGR03217 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase Back     alignment and domain information
>PRK15108 biotin synthase; Provisional Back     alignment and domain information
>PRK14041 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>PRK07094 biotin synthase; Provisional Back     alignment and domain information
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex Back     alignment and domain information
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit Back     alignment and domain information
>PRK09282 pyruvate carboxylase subunit B; Validated Back     alignment and domain information
>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain Back     alignment and domain information
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only] Back     alignment and domain information
>cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>PRK13207 ureC urease subunit alpha; Reviewed Back     alignment and domain information
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10 Back     alignment and domain information
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon Back     alignment and domain information
>TIGR01496 DHPS dihydropteroate synthase Back     alignment and domain information
>TIGR00433 bioB biotin synthetase Back     alignment and domain information
>PRK06256 biotin synthase; Validated Back     alignment and domain information
>PRK06740 histidinol-phosphatase; Validated Back     alignment and domain information
>PRK12344 putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional Back     alignment and domain information
>PF08187 Tetradecapep: Myoactive tetradecapeptides family; InterPro: IPR012619 This entry consists of myoactive tetradecapeptides that are isolated from the gut of Earthworms, Eisenia foetida (Common brandling worm) and Pheretima vittata (Earthworm) Back     alignment and domain information
>COG0119 LeuA Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00915 2-isopropylmalate synthase; Validated Back     alignment and domain information
>PRK12330 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional Back     alignment and domain information
>PRK14024 phosphoribosyl isomerase A; Provisional Back     alignment and domain information
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] Back     alignment and domain information
>PRK06801 hypothetical protein; Provisional Back     alignment and domain information
>PLN03228 methylthioalkylmalate synthase; Provisional Back     alignment and domain information
>cd01335 Radical_SAM Radical SAM superfamily Back     alignment and domain information
>PRK14040 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>TIGR00973 leuA_bact 2-isopropylmalate synthase, bacterial type Back     alignment and domain information
>PRK00507 deoxyribose-phosphate aldolase; Provisional Back     alignment and domain information
>PRK10812 putative DNAse; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query269
2ada_A352 Atomic Structure Of Adenosine Deaminase Complexed W 2e-11
1fkx_A349 Murine Adenosine Deaminase (D296a) Length = 349 3e-11
1a4l_A349 Ada Structure Complexed With Deoxycoformycin At Ph 3e-11
1fkw_A349 Murine Adenosine Deaminase (D295e) Length = 349 3e-11
3km8_A352 Crystal Structuore Of Adenosine Deaminase From Mus 5e-11
4gxw_A 380 Crystal Structure Of A Cog1816 Amidohydrolase (Targ 9e-11
3t1g_A353 Engineering Of Organophosphate Hydrolase By Computa 2e-10
1uio_A349 Adenosine Deaminase (His 238 Ala Mutant) Length = 3 3e-10
1uip_A349 Adenosine Deaminase (His 238 Glu Mutant) Length = 3 3e-10
1ndv_A356 Crystal Structure Of Adenosine Deaminase Complexed 3e-10
3ou8_A326 The Crystal Structure Of Adenosine Deaminase From P 3e-10
2bgn_E 363 Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Tr 4e-10
1w1i_E357 Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv 4e-10
1krm_A356 Crystal Structure Of Bovine Adenosine Deaminase Com 4e-10
3iar_A 367 The Crystal Structure Of Human Adenosine Deaminase 3e-09
2amx_A376 Crystal Structure Of Plasmodium Yoelii Adenosine De 3e-04
>pdb|2ADA|A Chain A, Atomic Structure Of Adenosine Deaminase Complexed With A Transition-State Analog: Understanding Catalysis And Immunodeficiency Mutations Length = 352 Back     alignment and structure 
Iteration: 1

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 8   PKVELHAHLNGSIRDSTLLELARVLGEKGVIVFSD----VEHVI-MKSDRSLHEVFKLFD 62
           PKVELH HL+G+I+  T+L   +   ++G+ + +D    + ++I M    SL      FD
Sbjct: 10  PKVELHVHLDGAIKPETILYFGK---KRGIALPADTVEELRNIIGMDKPLSLPGFLAKFD 66
Query: 63  -LIHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEGLR 121
             + V+      + RI  E VE  A E +VY+E+R +P                    L 
Sbjct: 67  YYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPH-------------------LL 107
Query: 122 AVSAVD-VDFASRSIDVRRPVNTKNMNDACN-GTRGKKIYVRLLLSIDRRETTEAAMETV 179
           A S VD + +     DV        +N     G +   I VR +L   R + +  ++E +
Sbjct: 108 ANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPS-WSLEVL 166
Query: 180 KLALEMRDLGVVGIDLSGNPTKGEWTTFLP----ALKFAREQGLQITLHCGEIPNKEEIQ 235
           +L  +     VV +DL+G+ T  E ++  P    A + A + G+  T+H GE+ + E ++
Sbjct: 167 ELCKKYNQKTVVAMDLAGDETI-EGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVR 225
Query: 236 SMLDFLP-QRIGHACCFEEEE 255
             +D L  +R+GH     E+E
Sbjct: 226 EAVDILKTERVGHGYHTIEDE 246
>pdb|1FKX|A Chain A, Murine Adenosine Deaminase (D296a) Length = 349 Back     alignment and structure
>pdb|1A4L|A Chain A, Ada Structure Complexed With Deoxycoformycin At Ph 7.0 Length = 349 Back     alignment and structure
>pdb|1FKW|A Chain A, Murine Adenosine Deaminase (D295e) Length = 349 Back     alignment and structure
>pdb|3KM8|A Chain A, Crystal Structuore Of Adenosine Deaminase From Mus Musculus Complexed With 9-Deazainosine Length = 352 Back     alignment and structure
>pdb|4GXW|A Chain A, Crystal Structure Of A Cog1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, With Bound Zn Length = 380 Back     alignment and structure
>pdb|3T1G|A Chain A, Engineering Of Organophosphate Hydrolase By Computational Design And Directed Evolution Length = 353 Back     alignment and structure
>pdb|1UIO|A Chain A, Adenosine Deaminase (His 238 Ala Mutant) Length = 349 Back     alignment and structure
>pdb|1UIP|A Chain A, Adenosine Deaminase (His 238 Glu Mutant) Length = 349 Back     alignment and structure
>pdb|1NDV|A Chain A, Crystal Structure Of Adenosine Deaminase Complexed With Fr117016 Length = 356 Back     alignment and structure
>pdb|3OU8|A Chain A, The Crystal Structure Of Adenosine Deaminase From Pseudomonas Aeruginosa Length = 326 Back     alignment and structure
>pdb|2BGN|E Chain E, Hiv-1 Tat Protein Derived N-Terminal Nonapeptide Trp2-Tat (1-9) Bound To The Active Site Of Dipeptidyl Peptidase Iv (Cd26) Length = 363 Back     alignment and structure
>pdb|1W1I|E Chain E, Crystal Structure Of Dipeptidyl Peptidase Iv (Dppiv Or Cd26) In Complex With Adenosine Deaminase Length = 357 Back     alignment and structure
>pdb|1KRM|A Chain A, Crystal Structure Of Bovine Adenosine Deaminase Complexed With 6-Hydroxyl-1,6-Dihydropurine Riboside Length = 356 Back     alignment and structure
>pdb|3IAR|A Chain A, The Crystal Structure Of Human Adenosine Deaminase Length = 367 Back     alignment and structure
>pdb|2AMX|A Chain A, Crystal Structure Of Plasmodium Yoelii Adenosine Deaminase (Py02076) Length = 376 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query269
3pao_A326 Adenosine deaminase; structural genomics, PSI-2, p 2e-42
3rys_A343 Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2 3e-41
2pgf_A371 Adenosine deaminase; metallo-dependent hydrolase, 7e-39
3iar_A 367 Adenosine deaminase; purine metabolism structural 1e-37
3lgd_A 508 Adenosine deaminase CECR1; TIM barrel, dimerizatio 3e-34
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A* Length = 326 Back     alignment and structure
 Score =  146 bits (371), Expect = 2e-42
 Identities = 68/275 (24%), Positives = 107/275 (38%), Gaps = 50/275 (18%)

Query: 2   EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGV-IVFSDVEHVIMKSD-RSLHEVFK 59
           EW  ++PK ELH HL G++    L  LA       + + ++DVE +       +L E   
Sbjct: 5   EWLNALPKAELHLHLEGTLEPELLFALAE---RNRIALPWNDVETLRKAYAFNNLQEFLD 61

Query: 60  LFDL-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVE 118
           L+     VL T+      +T   ++   ++N+V++E    P+ +   G+     +  +  
Sbjct: 62  LYYAGADVLRTEQD-FYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRA 120

Query: 119 GLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKKIYVRLLLSIDRRETTEAAMET 178
            LR                              G +   I   L+LS  R  + E A +T
Sbjct: 121 ALRD-----------------------------GEKLLGIRHGLILSFLRHLSEEQAQKT 151

Query: 179 VKLALEMRDLGVVGIDLSGN-----PTKGEWTTFLPALKFAREQGLQITLHCGEIPNKEE 233
           +  AL  RD   + + L  +     P+K     F      AR +G     H GE    E 
Sbjct: 152 LDQALPFRD-AFIAVGLDSSEVGHPPSK-----FQRVFDRARSEGFLTVAHAGEEGPPEY 205

Query: 234 IQSMLDFL-PQRIGHAC-CFEEEE-WRKLKSSKIP 265
           I   LD L  +RI H    FE+E   R+L   +IP
Sbjct: 206 IWEALDLLKVERIDHGVRAFEDERLMRRLIDEQIP 240
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} Length = 343 Back     alignment and structure
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A Length = 371 Back     alignment and structure
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ... Length = 367 Back     alignment and structure
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A* Length = 508 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query269
4gxw_A 380 Adenosine deaminase; amidohydrolase, COG1816, EFI, 100.0
3rys_A343 Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2 100.0
3pao_A326 Adenosine deaminase; structural genomics, PSI-2, p 100.0
3iar_A 367 Adenosine deaminase; purine metabolism structural 100.0
2pgf_A371 Adenosine deaminase; metallo-dependent hydrolase, 100.0
3lgd_A 508 Adenosine deaminase CECR1; TIM barrel, dimerizatio 100.0
2a3l_A 701 AMP deaminase, AMPD; atampd, AT2G38280, adenosine 100.0
4dyk_A 451 Amidohydrolase; adenosine deaminase, nysgrc, struc 98.75
3h4u_A 479 Amidohydrolase; signature of Zn ligands, structura 98.72
4f0r_A 447 5-methylthioadenosine/S-adenosylhomocysteine DEAM; 98.54
3lnp_A 468 Amidohydrolase family protein OLEI01672_1_465; TIM 98.49
4dzh_A 472 Amidohydrolase; adenosine deaminase, nysgrc, struc 98.48
3ls9_A 456 Triazine hydrolase; atrazine chlorohydrolase TRZN; 98.36
3mdu_A 453 N-formimino-L-glutamate iminohydrolase; amonohydra 98.3
1ra0_A 430 Cytosine deaminase; alpha-beta barrel, hexamer, co 97.95
4aql_A 476 Guanine deaminase; hydrolase, purine metabolism; H 97.8
3gnh_A 403 L-lysine, L-arginine carboxypeptidase CC2672; N-me 97.77
2r8c_A 426 Putative amidohydrolase; unknown source, sargasso 97.53
2i9u_A 439 Cytosine/guanine deaminase related protein; protei 97.48
3feq_A 423 Putative amidohydrolase; unknown source, sargasso 97.44
2paj_A 492 Putative cytosine/guanine deaminase; NYSGXRC, PSI- 97.39
3be7_A 408 Zn-dependent arginine carboxypeptidase; unknown so 97.24
2qs8_A 418 XAA-Pro dipeptidase; amidohydrolase, TIM barrel, p 97.24
4f0l_A 458 Amidohydrolase; ssgcid, structural genomics, seatt 97.23
2qt3_A 403 N-isopropylammelide isopropyl amidohydrolase; N-is 97.22
2q09_A 416 Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dio 97.18
2ood_A 475 BLR3880 protein; PSI-II, PSI-2, guanine deaminase, 96.88
2vun_A 386 Enamidase; nicotinate degradation, binuclear metal 96.82
3v7p_A 427 Amidohydrolase family protein; iron binding site, 96.47
3ooq_A 396 Amidohydrolase; structural genomics, protein struc 96.38
2p9b_A 458 Possible prolidase; protein structure initiative I 96.36
2bb0_A 421 Imidazolonepropionase; TIM barrel, hydrolase; 2.00 96.2
2imr_A420 Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, 96.16
2puz_A 419 Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino 95.93
3icj_A 534 Uncharacterized metal-dependent hydrolase; structu 95.81
1zzm_A259 Putative deoxyribonuclease YJJV; hydrolaze, zinc, 94.63
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 94.31
2y1h_A272 Putative deoxyribonuclease tatdn3; hydrolase; 2.50 94.05
1ydo_A307 HMG-COA lyase; TIM-barrel protein, structural geno 93.98
2ftp_A302 Hydroxymethylglutaryl-COA lyase; structural genomi 93.91
2ztj_A 382 Homocitrate synthase; (beta/alpha)8 TIM barrel, su 93.9
2ics_A 379 Adenine deaminase; TIM barrel, binuclear zinc, ade 93.89
2cw6_A298 Hydroxymethylglutaryl-COA lyase, mitochondrial; HM 93.71
3ble_A337 Citramalate synthase from leptospira interrogans; 93.36
1yix_A265 Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW 92.63
2xio_A 301 Putative deoxyribonuclease tatdn1; hydrolase; 1.19 92.38
3ivs_A 423 Homocitrate synthase, mitochondrial; TIM barrel, m 91.79
3ewb_X293 2-isopropylmalate synthase; LEUA, structural genom 91.38
1r30_A 369 Biotin synthase; SAM radical protein, TIM barrel, 91.37
1j6o_A268 TATD-related deoxyribonuclease; structural genomic 91.13
2ogj_A 417 Dihydroorotase; TIM barrel, binuclear zinc, imidaz 89.7
3cjp_A272 Predicted amidohydrolase, dihydroorotase family; s 89.38
3iix_A 348 Biotin synthetase, putative; adoMet radical, SAM r 88.94
3rmj_A 370 2-isopropylmalate synthase; LEUA, truncation, neis 88.73
1p1m_A 406 Hypothetical protein TM0936; putative metal depend 88.19
2ob3_A 330 Parathion hydrolase; metalloenzyme, TIM barrel, ne 88.16
1xwy_A264 DNAse TATD, deoxyribonuclease TATD; TIM barrael, z 88.11
2nx9_A 464 Oxaloacetate decarboxylase 2, subunit alpha; carbo 87.15
1nvm_A345 HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered 87.15
1yrr_A 382 N-acetylglucosamine-6-phosphate deacetylase; (beta 86.95
2vc7_A314 Aryldialkylphosphatase; phosphotriesterase, promis 86.64
2gzx_A265 Putative TATD related DNAse; deoxyribonuclease, NE 85.35
1bf6_A291 Phosphotriesterase homology protein; hypothetical 85.29
3irs_A291 Uncharacterized protein BB4693; structural genomic 83.0
3eeg_A325 2-isopropylmalate synthase; 11106D, beta barrel, P 82.6
1mzh_A225 Deoxyribose-phosphate aldolase; alpha-beta barrel, 82.05
3tn4_A360 Phosphotriesterase; lactonase, hydrolase; HET: KCX 81.36
3k2g_A 364 Resiniferatoxin-binding, phosphotriesterase- relat 80.73
3pnz_A330 Phosphotriesterase family protein; amidohydrolase 80.51
3rcm_A 287 TATD family hydrolase; HET: CIT; 2.05A {Pseudomona 80.48
1m5w_A243 Pyridoxal phosphate biosynthetic protein PDXJ; TIM 80.25
3gk0_A278 PNP synthase, pyridoxine 5'-phosphate synthase; de 80.22
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria} Back     alignment and structure
Probab=100.00  E-value=6.2e-58  Score=425.59  Aligned_cols=234  Identities=26%  Similarity=0.373  Sum_probs=212.9

Q ss_pred             hhhhcCCcchhccccCCCCCHHHHHHHHHHhccCCCccc-hhhHHHHh--hcCCCHHHHHHHhHHHHHhhCCHHHHHHHH
Q 024328            2 EWFASMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVF-SDVEHVIM--KSDRSLHEVFKLFDLIHVLTTDHATVTRIT   78 (269)
Q Consensus         2 ~~i~~lPK~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~-~~~~~~~~--~~~~~l~~f~~~f~~~~~l~~~~~~~~~~~   78 (269)
                      +||++|||+|||+||+||++|+|+++||++   +|++++ .+++.++.  ....++.+|+..|.  ..++++++++++++
T Consensus        24 ~Fi~~LPKvELH~HLdGsl~p~tl~~LA~~---~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~vl~t~ed~~r~a   98 (380)
T 4gxw_A           24 AFFHALPKVELHCHLLGAVRHDTFVALAQR---SGAPIERAEIDAFYARGEKPVGVLHVLRALD--RYLLTRPDDLRRIA   98 (380)
T ss_dssp             HHHHHSCEEECCBBGGGCCCHHHHHHHHHH---HTCSCCTTHHHHHHCCCSSCCCSHHHHHHHH--HHTCCSHHHHHHHH
T ss_pred             HHHHhChhHHhhcCCcCCCCHHHHHHHHHH---hCCCCCcccHHHHHHhhhccccHHHHHHHHH--HHHcCCHHHHHHHH
Confidence            699999999999999999999999999995   677664 35666653  23567888888876  34899999999999


Q ss_pred             HHHHHHHHhcCCeEEEEecCCCCcc-cCCCCHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccCCCCCC
Q 024328           79 QEVVEDFASENIVYLELRTTPKRNE-SIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMNDACNGTRGKK  157 (269)
Q Consensus        79 ~~~~~~~~~dnV~Y~Elr~~p~~~~-~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (269)
                      +++++++++|||+|+|+||+|..+. ..|++.+++++++++|++++.+                             ++|
T Consensus        99 ~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~-----------------------------~~g  149 (380)
T 4gxw_A           99 YEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAAR-----------------------------DFG  149 (380)
T ss_dssp             HHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHH-----------------------------HHC
T ss_pred             HHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHH-----------------------------hcC
Confidence            9999999999999999999998875 4799999999999999998743                             568


Q ss_pred             ceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChhhHHHHHHHHHHcCCceeeecCCCCCh-hHHHH
Q 024328          158 IYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWTTFLPALKFAREQGLQITLHCGEIPNK-EEIQS  236 (269)
Q Consensus       158 i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~~f~~~f~~ar~~gl~~t~HAGE~~~~-e~i~~  236 (269)
                      |.+|+|+|++|+.+++.+.++++++.++++++||||||+|+|.++|+..|.++|++||+.|+++|+||||.++| ++|++
T Consensus       150 i~~rlI~~~~R~~~~e~a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~  229 (380)
T 4gxw_A          150 IGARLIPSIDREQDPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVET  229 (380)
T ss_dssp             CEEEEEEEEETTSCHHHHHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHH
T ss_pred             CcEEEEEeecCCCCHHHHHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHcCCCeeeeccccCCchHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998865 89999


Q ss_pred             HHh-cCCCcccccccC--CHHHHHHHHhCCCceeeC
Q 024328          237 MLD-FLPQRIGHACCF--EEEEWRKLKSSKIPVRIS  269 (269)
Q Consensus       237 ai~-l~a~RIGHG~~~--~~~l~~~l~~~~I~lEic  269 (269)
                      |++ +|++|||||+++  +|++++++++++|+||||
T Consensus       230 al~~lga~RIgHG~~~~~d~~L~~~l~~~~I~lEvC  265 (380)
T 4gxw_A          230 AVDLLHVDRVDHGYTIVDNPELCARYAERGIVFTVV  265 (380)
T ss_dssp             HHHTSCCSEEEECGGGGGCHHHHHHHHHHTCEEEEC
T ss_pred             HHHHcCCcccccceeeccChHHHHHHHHhCceeEEC
Confidence            997 799999999987  799999999999999999
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0 Back     alignment and structure
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A* Back     alignment and structure
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ... Back     alignment and structure
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A Back     alignment and structure
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A* Back     alignment and structure
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1 Back     alignment and structure
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa} Back     alignment and structure
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A* Back     alignment and structure
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica} Back     alignment and structure
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV} Back     alignment and structure
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A* Back     alignment and structure
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A* Back     alignment and structure
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A Back     alignment and structure
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A Back     alignment and structure
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A* Back     alignment and structure
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9 Back     alignment and structure
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A* Back     alignment and structure
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9 Back     alignment and structure
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A* Back     alignment and structure
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18 Back     alignment and structure
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus} Back     alignment and structure
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP} Back     alignment and structure
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A* Back     alignment and structure
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9 Back     alignment and structure
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} Back     alignment and structure
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP} Back     alignment and structure
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima} Back     alignment and structure
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17 Back     alignment and structure
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A Back     alignment and structure
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16 Back     alignment and structure
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A Back     alignment and structure
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X* Back     alignment and structure
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12 Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens} Back     alignment and structure
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp} Back     alignment and structure
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A* Back     alignment and structure
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 Back     alignment and structure
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A* Back     alignment and structure
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* Back     alignment and structure
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12 Back     alignment and structure
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens} Back     alignment and structure
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A* Back     alignment and structure
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str} Back     alignment and structure
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1 Back     alignment and structure
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12 Back     alignment and structure
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens} Back     alignment and structure
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824} Back     alignment and structure
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A* Back     alignment and structure
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis} Back     alignment and structure
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A Back     alignment and structure
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ... Back     alignment and structure
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12 Back     alignment and structure
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae} Back     alignment and structure
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5 Back     alignment and structure
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A* Back     alignment and structure
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A* Back     alignment and structure
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp} Back     alignment and structure
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3 Back     alignment and structure
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A Back     alignment and structure
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1 Back     alignment and structure
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A* Back     alignment and structure
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2} Back     alignment and structure
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0 Back     alignment and structure
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida} Back     alignment and structure
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A* Back     alignment and structure
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 269
d1a4ma_349 c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus 2e-31
d2amxa1357 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plas 5e-25
d2a3la1 628 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalyti 3e-24
>d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus musculus) [TaxId: 10090]} Length = 349 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Adenosine/AMP deaminase
domain: Adenosine deaminase (ADA)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  117 bits (293), Expect = 2e-31
 Identities = 66/274 (24%), Positives = 118/274 (43%), Gaps = 33/274 (12%)

Query: 6   SMPKVELHAHLNGSIRDSTLLELARVLGEKGV-IVFSDVEHVI----MKSDRSLHEVFKL 60
           + PKVELH HL+G+I+  T+L   +   ++G+ +    VE +     M    SL      
Sbjct: 5   NKPKVELHVHLDGAIKPETILYFGK---KRGIALPADTVEELRNIIGMDKPLSLPGFLAK 61

Query: 61  FDL-IHVLTTDHATVTRITQEVVEDFASENIVYLELRTTPKRNESIGMSKRSYMDAVVEG 119
           FD  + V+      + RI  E VE  A E +VY+E+R +P    +  +    + +     
Sbjct: 62  FDYYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPW-NQTEGD 120

Query: 120 LRAVSAVDVDFASRSIDVRRPVNTKNMNDACN-GTRGKKIYVRLLLSIDRRETTEAAMET 178
           +     VD+                 +N     G +   I VR +L   R +    ++E 
Sbjct: 121 VTPDDVVDL-----------------VNQGLQEGEQAFGIKVRSILCCMRHQ-PSWSLEV 162

Query: 179 VKLALEMRDLGVVGIDLSGNPTKG---EWTTFLPALKFAREQGLQITLHCGEIPNKEEIQ 235
           ++L  +     VV +DL+G+ T      +   + A + A + G+  T+H GE+ + E ++
Sbjct: 163 LELCKKYNQKTVVAMDLAGDETIEGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVR 222

Query: 236 SMLDFL-PQRIGHACCFEEEEWRKLKSSKIPVRI 268
             +D L  +R+GH     E+E    +  K  +  
Sbjct: 223 EAVDILKTERVGHGYHTIEDEALYNRLLKENMHF 256
>d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} Length = 357 Back     information, alignment and structure
>d2a3la1 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalytic domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 628 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query269
d1a4ma_349 Adenosine deaminase (ADA) {Mouse (Mus musculus) [T 100.0
d2amxa1357 Adenosine deaminase (ADA) {Plasmodium yoelii [TaxI 100.0
d2a3la1 628 AMP deaminase (AMPD), catalytic domain {Thale cres 99.93
d1p1ma2281 Hypothetical protein TM0936, probable catalytic do 97.12
d2i9ua2310 Guanine deaminase {Clostridium acetobutylicum [Tax 96.54
d2puza2301 Imidazolonepropionase {Agrobacterium tumefaciens [ 95.85
d2bb0a2300 Imidazolonepropionase {Bacillus subtilis [TaxId: 1 95.71
d2q09a2301 Probable 4-imidazolone-5-propanoate amidohydrolase 94.96
d2uz9a2313 Guanine deaminase {Human (Homo sapiens) [TaxId: 96 94.63
d1ra0a2320 Cytosine deaminase catalytic domain {Escherichia c 94.18
d1m65a_244 Hypothetical protein YcdX {Escherichia coli [TaxId 85.52
d1bf6a_291 Phosphotriesterase homology protein {Escherichia c 85.38
d1r30a_ 312 Biotin synthase {Escherichia coli [TaxId: 562]} 82.6
>d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Adenosine/AMP deaminase
domain: Adenosine deaminase (ADA)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.7e-51  Score=371.74  Aligned_cols=231  Identities=27%  Similarity=0.414  Sum_probs=201.4

Q ss_pred             cCCcchhccccCCCCCHHHHHHHHHHhccCCCccch-hhHH---HHh-hcCCCHHHHHHHhHHHHHhh-CCHHHHHHHHH
Q 024328            6 SMPKVELHAHLNGSIRDSTLLELARVLGEKGVIVFS-DVEH---VIM-KSDRSLHEVFKLFDLIHVLT-TDHATVTRITQ   79 (269)
Q Consensus         6 ~lPK~eLH~HL~Gs~~~~tl~~la~~~~~~g~~~~~-~~~~---~~~-~~~~~l~~f~~~f~~~~~l~-~~~~~~~~~~~   79 (269)
                      +|||+|||+||+||++++||++||++   +|+.++. +.+.   ++. ..+.+|.+|++.|.....++ .++++++++++
T Consensus         5 ~lPK~eLH~HL~Gsi~~~~l~~la~~---~~~~lp~~~~~~~~~~~~~~~~~~l~~f~~~f~~~~~~~~~~~e~~~~~~~   81 (349)
T d1a4ma_           5 NKPKVELHVHLDGAIKPETILYFGKK---RGIALPADTVEELRNIIGMDKPLSLPGFLAKFDYYMPVIAGCREAIKRIAY   81 (349)
T ss_dssp             CSCEEEEEEEGGGSCCHHHHHHHHHH---HTCCCSCSSHHHHHHHHCCCSCCCHHHHHTTHHHHHHHHTTCHHHHHHHHH
T ss_pred             CCcHHHHhcCCcCCCCHHHHHHHHHH---cCCCCCCCCHHHHHHHhccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence            79999999999999999999999996   5665533 3333   332 34679999999998776666 57899999999


Q ss_pred             HHHHHHHhcCCeEEEEecCCCCcc------------cCCCCHHHHHHHHHHHHHhhhhcccccccccccccccccccccc
Q 024328           80 EVVEDFASENIVYLELRTTPKRNE------------SIGMSKRSYMDAVVEGLRAVSAVDVDFASRSIDVRRPVNTKNMN  147 (269)
Q Consensus        80 ~~~~~~~~dnV~Y~Elr~~p~~~~------------~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (269)
                      ++++++++|||+|+|+|++|..+.            .+|++.+++++++.++++.+..                      
T Consensus        82 ~~~~~~~~dnv~y~Elr~~P~~~~~~~~~~~~~~~~~~~l~~~~vv~~i~~~~~~~~~----------------------  139 (349)
T d1a4ma_          82 EFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQ----------------------  139 (349)
T ss_dssp             HHHHHHHHTTEEEEEEEECSGGGCCSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHH----------------------
T ss_pred             HHHHHHHhcCeeEEEEEeChhhhcccccccchhhhhhcCCCHHHHHHHHHHHHHHhcc----------------------
Confidence            999999999999999999997632            3468999999999999987643                      


Q ss_pred             ccccCCCCCCceEEEEEEEeCCCCHHHHHHHHHHHHhhCCCceEEEecCCCCCCCChh---hHHHHHHHHHHcCCceeee
Q 024328          148 DACNGTRGKKIYVRLLLSIDRRETTEAAMETVKLALEMRDLGVVGIDLSGNPTKGEWT---TFLPALKFAREQGLQITLH  224 (269)
Q Consensus       148 ~~~~~~~~~~i~~rli~~~~R~~~~~~~~~~~~~a~~~~~~~vvGidl~G~E~~~~~~---~f~~~f~~ar~~gl~~t~H  224 (269)
                             .+++.+++|++++|+.+ +.+.+.+.++.++.+++||||||+|+|..+++.   .|.++|+.||+.|+++|+|
T Consensus       140 -------~~~~~~~~i~~~~r~~~-~~~~e~~~~~~~~~~~~vvGidl~G~E~~~~~~~~~~~~~~f~~ar~~gl~~t~H  211 (349)
T d1a4ma_         140 -------AFGIKVRSILCCMRHQP-SWSLEVLELCKKYNQKTVVAMDLAGDETIEGSSLFPGHVEAYEGAVKNGIHRTVH  211 (349)
T ss_dssp             -------HHCCEEEEEEEEETTCG-GGHHHHHHHHHHTBTTTEEEEEEESCTTSTTGGGCHHHHHHHHHHHHHTCEEEEE
T ss_pred             -------cCCceEEEEEEEeccch-hhHHHHHHHHHHhcccccccceecCccCCCChhhHHHHHHHHHHHHHcCCceeec
Confidence                   46889999999999864 556788899999988899999999999987654   5999999999999999999


Q ss_pred             cCCCCChhHHHHHHh-cCCCcccccccC--CHHHHHHHHhCCCceeeC
Q 024328          225 CGEIPNKEEIQSMLD-FLPQRIGHACCF--EEEEWRKLKSSKIPVRIS  269 (269)
Q Consensus       225 AGE~~~~e~i~~ai~-l~a~RIGHG~~~--~~~l~~~l~~~~I~lEic  269 (269)
                      |||..+++++++|+. +||+|||||+++  +|++++++++++|+||||
T Consensus       212 aGE~~~~~~i~~ai~~l~~~RIGHG~~l~~d~~l~~~~~~~~I~lEvC  259 (349)
T d1a4ma_         212 AGEVGSPEVVREAVDILKTERVGHGYHTIEDEALYNRLLKENMHFEVC  259 (349)
T ss_dssp             ESSSSCHHHHHHHHHTSCCSEEEECGGGGGSHHHHHHHHHTTCEEEEC
T ss_pred             cCCCCChHHHHHHHHHhCCcccCCceecccCHHHHHHhhhcCceEEEc
Confidence            999999999999998 899999999987  789999999999999999
>d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} Back     information, alignment and structure
>d2a3la1 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalytic domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1p1ma2 c.1.9.9 (A:50-330) Hypothetical protein TM0936, probable catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2bb0a2 c.1.9.17 (A:74-373) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2q09a2 c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples} Back     information, alignment and structure
>d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m65a_ c.6.3.1 (A:) Hypothetical protein YcdX {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure