BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024330
(269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1
PE=2 SV=1
Length = 545
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/269 (89%), Positives = 255/269 (94%)
Query: 1 MAISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITND 60
M+IS+Q DI G+RQ+GQDVRTQNVMACQAV+NIVK+SLGPVGLDKMLVDDIGDVTITND
Sbjct: 1 MSISAQNPDISGDRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITND 60
Query: 61 GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI 120
GATIL+MLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI
Sbjct: 61 GATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI 120
Query: 121 ISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQ 180
ISGYRLAMRE+CKY+ EKL KVEKLGK L+NCAKTSMSSKLI GDSDFFANLVVEAV
Sbjct: 121 ISGYRLAMRESCKYIEEKLVTKVEKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVL 180
Query: 181 AVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACL 240
+VKMTNQRGE+KYPIKGINILKAHG+SARDSY LNGYALN RAAQGMPLRV+PAKIACL
Sbjct: 181 SVKMTNQRGEIKYPIKGINILKAHGQSARDSYLLNGYALNTGRAAQGMPLRVSPAKIACL 240
Query: 241 DFNLQKTKMQLGVQVLVTDPRELEKIRQR 269
DFNLQKTKMQLGVQV+V DPRELEKIRQR
Sbjct: 241 DFNLQKTKMQLGVQVVVNDPRELEKIRQR 269
>sp|Q9XT06|TCPA_MONDO T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1
PE=2 SV=1
Length = 557
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 225/262 (85%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + GER G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGERTTGESIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTSII GYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y+NE L + ++LGKD L+N AKTSMSSK+IG D DFFAN+VV+AV AVK T+
Sbjct: 125 CKEAVRYINENLIINTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAVKYTDV 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
+G+ +YP+ IN+LKAHG+S ++S +NGYALN A+QGMP R+ AKIACLDF+LQKT
Sbjct: 185 KGQPRYPVNSINVLKAHGRSQKESMLINGYALNCVVASQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQR 269
KM+LGVQV++TDP +L++IR+R
Sbjct: 245 KMKLGVQVVITDPEKLDQIRKR 266
>sp|P12613|TCPA_DROME T-complex protein 1 subunit alpha OS=Drosophila melanogaster
GN=T-cp1 PE=2 SV=2
Length = 557
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/269 (68%), Positives = 227/269 (84%)
Query: 1 MAISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITND 60
M+ + L I G RQ+G VRTQNVMA +++NIVKSSLGPVGLDKMLVDDIGDVT+TND
Sbjct: 1 MSTLASPLSIAGTRQSGASVRTQNVMAALSISNIVKSSLGPVGLDKMLVDDIGDVTVTND 60
Query: 61 GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI 120
GATIL++LEVEHPAAKVLVELA+LQD EVGDGTTSVVI+AAELLK A++LV+ KIHPTSI
Sbjct: 61 GATILRLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSI 120
Query: 121 ISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQ 180
ISGYR+A +EACKY++E L V++LG+DSL+N AKTSMSSK+IG D++FF+ +VV+A Q
Sbjct: 121 ISGYRIACKEACKYISEHLTAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQ 180
Query: 181 AVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACL 240
+VK+T+ RG+ Y IK IN+LKAHGKSAR+S + GYALN A+Q MP ++ AKIACL
Sbjct: 181 SVKITDPRGQAAYSIKAINVLKAHGKSARESVLIPGYALNCTIASQQMPKKIVNAKIACL 240
Query: 241 DFNLQKTKMQLGVQVLVTDPRELEKIRQR 269
DF+LQKTKM++GVQVL+ DP +LE IR R
Sbjct: 241 DFSLQKTKMKMGVQVLINDPDKLEAIRAR 269
>sp|P17987|TCPA_HUMAN T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1
Length = 556
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 224/262 (85%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y+NE L V ++LG+D L+N AKTSMSSK+IG + DFFAN+VV+AV A+K T+
Sbjct: 125 CKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDI 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ +NILKAHG+S +S ++GYALN +QGMP R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQR 269
KM+LGVQV++TDP +L++IRQR
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQR 266
>sp|Q9W790|TCPA_PALPA T-complex protein 1 subunit alpha OS=Paleosuchus palpebrosus
GN=TCP1 PE=2 SV=1
Length = 559
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/269 (68%), Positives = 223/269 (82%)
Query: 1 MAISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITND 60
MA L +LGER +G VR QNV A +ANIVKSSLGPVGLDKMLVDDIGDVTITND
Sbjct: 1 MAALEGPLAVLGERSSGDTVRNQNVTAAATIANIVKSSLGPVGLDKMLVDDIGDVTITND 60
Query: 61 GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSI 120
GATILK+LEVEHPAAKVL ELAELQD+EVGDGTTSVVI+AAELLK +++LV+ KIHPTSI
Sbjct: 61 GATILKLLEVEHPAAKVLCELAELQDKEVGDGTTSVVIIAAELLKNSDELVKQKIHPTSI 120
Query: 121 ISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQ 180
I GYRLA +EA +Y+NE L + ++LG+D L+N AKTSMSSK+IG D DFFA++VV+A
Sbjct: 121 IGGYRLACKEAVRYINENLIINTDELGRDCLINSAKTSMSSKIIGIDGDFFASMVVDAAS 180
Query: 181 AVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACL 240
AVK T+Q+G+ +YPI IN+LKAHG+S ++S +NGYALN +QGM R+ AKIACL
Sbjct: 181 AVKYTDQKGQARYPINSINVLKAHGRSQKESILVNGYALNCVVGSQGMTKRIVNAKIACL 240
Query: 241 DFNLQKTKMQLGVQVLVTDPRELEKIRQR 269
DF+LQKTKM+LGVQV++TDP +L++IRQR
Sbjct: 241 DFSLQKTKMKLGVQVVITDPEKLDQIRQR 269
>sp|P11983|TCPA_MOUSE T-complex protein 1 subunit alpha OS=Mus musculus GN=Tcp1 PE=1 SV=3
Length = 556
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 223/262 (85%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ VR+QNVMA ++ANIVKSS GPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGEAVRSQNVMAAASIANIVKSSFGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y+NE L + ++LG+D L+N AKTSMSSK+IG + D+FAN+VV+AV AVK T+
Sbjct: 125 CKEAVRYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDYFANMVVDAVLAVKYTDA 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ +NILKAHG+S +S +NGYALN +QGMP R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSVNILKAHGRSQIESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQR 269
KM+LGVQV++TDP +L++IRQR
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQR 266
>sp|Q32L40|TCPA_BOVIN T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=1 SV=1
Length = 556
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 224/262 (85%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y++E L + ++LG+D L+N AKTSMSSK+IG + DFFANLVV+AV A+K T+
Sbjct: 125 CKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDI 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ IN+LKAHG+S +S +NGYALN +QGMP R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQR 269
KM+LGVQV++TDP +L++IRQR
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQR 266
>sp|P18279|TCPA_CRIGR T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1
PE=2 SV=1
Length = 556
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 224/262 (85%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y++E L + ++LG+D L+N AKTSMSSK+IG + DFFAN+VV+AV AVK T+
Sbjct: 125 CKEAVRYISENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDL 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ +NILKAHG+S +S +NGYALN +QGMP R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSVNILKAHGRSQVESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQR 269
KM+LGVQV++TDP +L++IRQR
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQR 266
>sp|Q4R5G2|TCPA_MACFA T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1
PE=2 SV=1
Length = 556
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/262 (67%), Positives = 223/262 (85%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++L + KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y+NE L V ++LG+D L+N AKTSMSSK+IG + DFFAN+VV+AV A+K T+
Sbjct: 125 CKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDT 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ +NILKAHG+S +S ++GYALN +QGMP R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSVNILKAHGRSQMESKLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQR 269
KM+LGVQV++TDP +L++IRQR
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQR 266
>sp|P28480|TCPA_RAT T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1
SV=1
Length = 556
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/262 (68%), Positives = 223/262 (85%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+
Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKL 64
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA
Sbjct: 65 LEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA 124
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA +Y+NE L + ++LG+D L+N AKTSMSSK+IG + DFFAN+VV+AV AVK T+
Sbjct: 125 CKEAVRYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDI 184
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
RG+ +YP+ +NILKAHG+S +S +NGYALN +QGM R+ AKIACLDF+LQKT
Sbjct: 185 RGQPRYPVNSVNILKAHGRSQIESMLINGYALNCVVGSQGMLKRIVNAKIACLDFSLQKT 244
Query: 248 KMQLGVQVLVTDPRELEKIRQR 269
KM+LGVQV++TDP +L++IRQR
Sbjct: 245 KMKLGVQVVITDPEKLDQIRQR 266
>sp|O94501|TCPA_SCHPO T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct1 PE=3 SV=1
Length = 556
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/263 (66%), Positives = 221/263 (84%)
Query: 7 TLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK 66
TL + GE+ +G+DVR QNV+A A+AN+VKSSLGPVGLDKMLVDDIGDVT+TNDGATIL
Sbjct: 9 TLFLSGEKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILS 68
Query: 67 MLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRL 126
+L+VEHPA KVLVELA+ QD+EVGDGTTSVVI+AAELL+RAN+LV+NKIHPT+II+GYRL
Sbjct: 69 LLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRL 128
Query: 127 AMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTN 186
A+REA K++ + L+ V+ LGK+SL+N AKTSMSSK+IG DSDFF+ + V+A+ +VK +N
Sbjct: 129 AIREAVKFMTDVLSCSVDSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSN 188
Query: 187 QRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQK 246
+GE +YP+K +NILKAHGKS+R+S + GYALN A+Q M RV AKIA LD +LQK
Sbjct: 189 SKGETRYPVKAVNILKAHGKSSRESVLVKGYALNCTIASQAMKTRVQNAKIAVLDMDLQK 248
Query: 247 TKMQLGVQVLVTDPRELEKIRQR 269
TKM LGV V + DP +LEKIR+R
Sbjct: 249 TKMALGVHVTIDDPDQLEKIRER 271
>sp|P12612|TCPA_YEAST T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TCP1 PE=1 SV=2
Length = 559
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 224/267 (83%), Gaps = 2/267 (0%)
Query: 5 SQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATI 64
S TL + GE+ +G D+R QNV+A AVAN+VKSSLGPVGLDKMLVDDIGD T+TNDGATI
Sbjct: 10 SDTLFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATI 69
Query: 65 LKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGY 124
L +L+V+HPA K+LVELA+ QDRE+GDGTTSVVI+A+ELLKRAN+LV+NKIHPT+II+G+
Sbjct: 70 LSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGF 129
Query: 125 RLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKM 184
R+A+REA +++NE L+ V+ LGK++L+N AKTSMSSK+IG DSDFF+N+VV+A+ AVK
Sbjct: 130 RVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKT 189
Query: 185 TNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPA--KIACLDF 242
N +GE+KYP+K +N+LKAHGKSA +S + GYALN A+Q MP R+A KIACLD
Sbjct: 190 QNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDL 249
Query: 243 NLQKTKMQLGVQVLVTDPRELEKIRQR 269
NLQK +M +GVQ+ + DP +LE+IR+R
Sbjct: 250 NLQKARMAMGVQINIDDPEQLEQIRKR 276
>sp|O15891|TCPA_TETPY T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3
SV=1
Length = 547
Score = 360 bits (925), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 216/261 (82%)
Query: 7 TLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK 66
++ ILGER GQDVRT NV A A+ANIVKSSLGP GLDKMLVDD+GDVTITNDGATIL+
Sbjct: 4 SVGILGERDQGQDVRTNNVTAVMAIANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILR 63
Query: 67 MLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRL 126
LEV+HPAAKV+VEL++LQD+EVGDGTTSVVI+AAELLKRAN+L++NK+HPTSII+G+++
Sbjct: 64 QLEVQHPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKI 123
Query: 127 AMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTN 186
A +EAC Y+ E LA+ VE+LG+++L+N AKTSMSSKLIG +S+ F+ +VV+AV++VKMTN
Sbjct: 124 AAKEACTYIKEHLAISVEELGREALINAAKTSMSSKLIGPESNLFSQIVVDAVESVKMTN 183
Query: 187 QRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQK 246
G+ KYPIK + I+K+HG+S S + GY L R Q M R+ AKIA LDFNL K
Sbjct: 184 LMGDTKYPIKNVKIIKSHGQSTLQSQLIRGYVLQTQRCDQQMKTRIEKAKIALLDFNLNK 243
Query: 247 TKMQLGVQVLVTDPRELEKIR 267
++Q+G+Q+LV DP+ LEKIR
Sbjct: 244 FRLQMGIQILVNDPKNLEKIR 264
>sp|P41988|TCPA_CAEEL T-complex protein 1 subunit alpha OS=Caenorhabditis elegans
GN=cct-1 PE=3 SV=2
Length = 549
Score = 358 bits (919), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 173/261 (66%), Positives = 213/261 (81%), Gaps = 1/261 (0%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + G+R GQ +R+QNV A A+ANIVKSSLGPVGLDKMLVDD+GDV +TNDGATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQ 68
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
LEVEHPA KVLVELA+LQD EVGDGTTSVVIVAAELLKRA++LV+ K+HPT+II+GYRLA
Sbjct: 69 LEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLA 128
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
+EA KY++E ++ + +G+ S+VN AKTSMSSK+IG D+DFF LVV+A +AV++ N
Sbjct: 129 CKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENN 188
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
G+V YPI +N+LKAHGKSAR+S + GYALN A+Q MPLRV AKIACLDF+L K
Sbjct: 189 -GKVTYPINAVNVLKAHGKSARESVLVKGYALNCTVASQAMPLRVQNAKIACLDFSLMKA 247
Query: 248 KMQLGVQVLVTDPRELEKIRQ 268
KM LG+ V+V DP +LE IR+
Sbjct: 248 KMHLGISVVVEDPAKLEAIRR 268
>sp|Q55BM4|TCPA_DICDI T-complex protein 1 subunit alpha OS=Dictyostelium discoideum
GN=tcp1 PE=2 SV=1
Length = 548
Score = 350 bits (898), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 170/267 (63%), Positives = 217/267 (81%)
Query: 3 ISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGA 62
+S++ L I G+R +G +VR QNV+A A+ANIVK+S GP+GLDKML+D+IG + +TNDGA
Sbjct: 1 MSNKVLMIDGDRISGNEVRAQNVLAVTAIANIVKTSFGPIGLDKMLIDNIGSIVVTNDGA 60
Query: 63 TILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIIS 122
TIL+ +++EHPAAK+LV+L+ELQD+EVGDGTT+VVI+AAELLKRAN+LV K+HPT IIS
Sbjct: 61 TILQKIDIEHPAAKILVQLSELQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIIS 120
Query: 123 GYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAV 182
G+RLA EA KY+NE LAVKVE L KD +VN AKTSMSSK I DSDFF+ +V+EA+ V
Sbjct: 121 GFRLACTEAIKYINETLAVKVETLPKDFIVNIAKTSMSSKTINDDSDFFSKIVIEAITRV 180
Query: 183 KMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDF 242
K + +G+VKYPI INILKAHGKSA++S + GYALN A++GMP R+ AKIA LDF
Sbjct: 181 KTIDYKGDVKYPINAINILKAHGKSAKESTLVEGYALNCTVASEGMPKRIQGAKIAFLDF 240
Query: 243 NLQKTKMQLGVQVLVTDPRELEKIRQR 269
NL KTKM+LG +V+VT+ +LE IR R
Sbjct: 241 NLAKTKMKLGQKVVVTNVNDLEAIRDR 267
>sp|Q94757|TCPA_SCHMA T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A
PE=2 SV=1
Length = 545
Score = 333 bits (853), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 163/262 (62%), Positives = 207/262 (79%)
Query: 8 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKM 67
L + GER +G+ VR QNV+A + AN VK+SLGPVGLDKMLVDD+GDVTITNDGATILK+
Sbjct: 2 LTLGGERTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKL 61
Query: 68 LEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLA 127
L+VEHPAAK+LV+LA+LQD EVGDGTTSVVI+AA LLK A++L+ +HPT++I+GYRLA
Sbjct: 62 LDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLA 121
Query: 128 MREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQ 187
REACKY+ E +A V KLGK L+N A+T+MSSKLI D+D F+ + V+A+ AV+++
Sbjct: 122 CREACKYIQEHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVSGG 181
Query: 188 RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247
YPIK +NILKAHG+S +S ++GYALN A+Q MP + AKIA LDF+LQK
Sbjct: 182 PKGPVYPIKAVNILKAHGRSMSESMLIDGYALNCTAASQQMPRIIKKAKIAFLDFSLQKV 241
Query: 248 KMQLGVQVLVTDPRELEKIRQR 269
KM+LGVQV+V DP +LE IRQR
Sbjct: 242 KMKLGVQVVVKDPAQLEAIRQR 263
>sp|Q8SSC9|TCPA_ENCCU T-complex protein 1 subunit alpha OS=Encephalitozoon cuniculi
(strain GB-M1) GN=TCP1 PE=1 SV=1
Length = 540
Score = 228 bits (581), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/266 (42%), Positives = 174/266 (65%), Gaps = 2/266 (0%)
Query: 6 QTLDIL--GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGAT 63
T DIL GE +G +N A V N +K+S GP+GLDKM VD G+V+ITNDGAT
Sbjct: 6 STADILSGGESYSGISAVEKNAKAMMKVYNAIKTSFGPLGLDKMCVDSAGEVSITNDGAT 65
Query: 64 ILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISG 123
IL+ + ++ PAAK+LV+LA QD EVGDGTTSVV++A L+++ L+ + +HP+ ++SG
Sbjct: 66 ILQNMLIDDPAAKILVDLATQQDHEVGDGTTSVVLIAVSLIEKGAKLIASGVHPSVVVSG 125
Query: 124 YRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVK 183
Y++A E +++ + ++ LG +L N +TS+SSK+I +S+ F +V++A++ ++
Sbjct: 126 YKMAFNECVQFIKKSMSKSTLNLGSKALRNVVETSISSKVISSESEVFCGIVIDALKCIE 185
Query: 184 MTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFN 243
++ + YPI+ INILK G S ++S+ GYALN A+ M +V KI C+DF
Sbjct: 186 SVDENRKNMYPIEDINILKHPGGSMKESFLHQGYALNCSLASNFMKRQVKKPKILCIDFG 245
Query: 244 LQKTKMQLGVQVLVTDPRELEKIRQR 269
LQK K L V ++V DP +LE IR++
Sbjct: 246 LQKYKNPLTVSIVVDDPNKLEDIRKK 271
>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
GN=thsB PE=3 SV=1
Length = 502
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/258 (43%), Positives = 169/258 (65%), Gaps = 4/258 (1%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R G+D N++A +A++ ++K++ GP G+DKMLVD +GDVTITNDGATIL E++H
Sbjct: 1 QRTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQH 60
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+LV++A+ QD EVGDGT VI+A ELLK A +L+ IHPT IISGYR+AM EA
Sbjct: 61 PAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEAL 120
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVK 192
K +++ +A ++ ++ L A+TS++SK + +FFA++ V+AV+ V +RG+
Sbjct: 121 KILDQ-MAEPIDLNNEELLRKVARTSLTSKAVHDAREFFADIAVKAVKQV--VEKRGDKN 177
Query: 193 Y-PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL 251
Y + I I+K +G + DS + G L+ GMP RV AKI LD L+ K ++
Sbjct: 178 YVDLDNIQIIKKYGGALLDSMLVYGIVLDKEVVHPGMPRRVENAKIVLLDAPLEIEKPEI 237
Query: 252 GVQVLVTDPRELEKIRQR 269
++ + DP +LEK Q+
Sbjct: 238 DAEIRINDPEQLEKFLQQ 255
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/259 (42%), Positives = 157/259 (60%), Gaps = 8/259 (3%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R +G+D N++A +A ++KSSLGP GLDKML+D GDVTITNDGATI+K +E++HP
Sbjct: 14 RSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHP 73
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+LVE A+ QD EVGDGTTS V++A LL +A +L+ +HPT II GY+ A+ +A +
Sbjct: 74 AAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALE 133
Query: 134 YVNE-KLAVKVEKL----GKDSLVNCAKTSMSSKLIGGDS---DFFANLVVEAVQAVKMT 185
+++ L + V L K L T+MSSK I G + D +LV++A+ V
Sbjct: 134 IIDQLSLKIDVNDLSSPTAKAQLKKIVSTTMSSKFIAGGAEEIDKIIDLVIDAITIVAEK 193
Query: 186 NQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQ 245
G P+ I I K G S DS ++G L+ GMP RV AKIA LD L+
Sbjct: 194 RPDGTYNVPLDLIKIDKKKGGSIEDSILVHGLVLDKEVVHAGMPRRVEKAKIAVLDAALE 253
Query: 246 KTKMQLGVQVLVTDPRELE 264
K ++ ++ +T P +++
Sbjct: 254 VEKPEISAKISITSPEQIK 272
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 164/258 (63%), Gaps = 4/258 (1%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R G++ N+MA +A+A I+K++ GP G+DKMLVD +GD+TITN+GATIL ++V H
Sbjct: 24 QRSYGREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATILDKMDVAH 83
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+LV++++ Q+ E GDGT + VI A ELLK A L+ IHPT I+ GY+ A+R+A
Sbjct: 84 PAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKAS 143
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVK 192
+ + E +A V + L AKTS++SK + D+FA L VEAV+ V +RG+
Sbjct: 144 EVI-ESIAEPVSYDDVEKLKLIAKTSLNSKAVAEARDYFAELAVEAVRTV--AERRGDRW 200
Query: 193 Y-PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL 251
Y + I I+K HG S RD+ + G L+ MP RV A+IA LD L+ K ++
Sbjct: 201 YVDLNNIQIVKKHGGSLRDTRLVRGIVLDKEVVHPDMPRRVENARIALLDTPLEIEKPEI 260
Query: 252 GVQVLVTDPRELEKIRQR 269
+++ +T P +++ + ++
Sbjct: 261 DLEISITSPEQIKALYEK 278
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 160/256 (62%), Gaps = 6/256 (2%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R G+D + N+MA + +A V+S+LGP G+DKMLVD +GDV ITNDG TILK ++VEH
Sbjct: 17 QRTVGRDAQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDGVTILKEIDVEH 76
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+++E+A+ QD EVGDGTT+ V++A ELLKRA +L+ +IHP I +GYR A +A
Sbjct: 77 PAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEKAL 136
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQR--GE 190
+ +NE +A+ + K + L A T+M+ K D A + AV AVKM + G+
Sbjct: 137 EILNE-IAIPISKDDDEILKKIATTAMTGKGAEVAIDKLAEI---AVNAVKMIAEESNGQ 192
Query: 191 VKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250
V+ I I K G S ++ ++G L+ GMP RV AKI LD L+ + +
Sbjct: 193 VEVNTDYIKIEKRQGGSIEETELVDGIVLDKEVVHPGMPKRVENAKILLLDSALEVKETE 252
Query: 251 LGVQVLVTDPRELEKI 266
+ ++ +TDP +L+K
Sbjct: 253 IDAKIRITDPEKLQKF 268
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 191 bits (485), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/269 (42%), Positives = 164/269 (60%), Gaps = 6/269 (2%)
Query: 1 MAISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTI 57
MA + + IL E R G++ N++A + +A ++KSSLGP GLDKMLVD GD+T+
Sbjct: 1 MAATGYPVLILKEGTQRTYGREALRANILAARVLAEMLKSSLGPRGLDKMLVDAFGDITV 60
Query: 58 TNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHP 117
TNDGATI+K +E++HPAAK+LVE+A+ QD EVGDGTTSVV++A LL++A L+ +HP
Sbjct: 61 TNDGATIVKEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEKAEKLLDENLHP 120
Query: 118 TSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGG--DSDFFANLV 175
T II GY AM EA + V+E AV VE L A+T+++SK +G + D ++V
Sbjct: 121 TIIIEGYTKAMEEALRLVDEA-AVPVEVEDDSVLRRIAETTLASKFVGTGPERDKIISMV 179
Query: 176 VEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPA 235
++A++ V G + + + I K G S DS + G L+ MP RV A
Sbjct: 180 IDAIRTVAEKRPDGGYEVDLDYVKIEKKKGGSLLDSKLVRGIVLDKEVVHPAMPKRVENA 239
Query: 236 KIACLDFNLQKTKMQLGVQVLVTDPRELE 264
KI LD L+ K +L ++ VTD +LE
Sbjct: 240 KILVLDAPLEVQKPELTTKIRVTDIEKLE 268
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 190 bits (482), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 165/252 (65%), Gaps = 2/252 (0%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R G+D + N+MA + VA V+++LGP+G+DKMLVD++GDV +TNDG TIL+ +++EH
Sbjct: 19 QRFVGRDAQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVTILEEMDIEH 78
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK++VE+A+ Q+ EVGDGTT+ V++A ELL +A DL++ IHPT I GYR+A+ E
Sbjct: 79 PAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYRMAV-EKA 137
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVK 192
+ + E++A +++ +++L AKT+M+ K + D+ A LVV+AV+ V + GE+
Sbjct: 138 EEILEEIAEEIDPDDEETLKKIAKTAMTGKGVEKARDYLAELVVKAVKQVA-EEEDGEIV 196
Query: 193 YPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLG 252
I + K G D+ + G ++ R GMP RV AKIA L+ ++ + +
Sbjct: 197 IDTDHIKLEKKEGGGLEDTELVKGMVIDKERVHPGMPRRVENAKIALLNCPIEVKETETD 256
Query: 253 VQVLVTDPRELE 264
++ +TDP +L+
Sbjct: 257 AEIRITDPEQLQ 268
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 162/256 (63%), Gaps = 6/256 (2%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R G+D + N+MA + +A VKS+LGP G+DKMLVD +GDV ITNDG TILK ++VEH
Sbjct: 17 QRTVGRDAQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTILKEMDVEH 76
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+++E+A+ QD EVGDGTT+ V++A ELLK+A +L+ IHPT I GYR+A +A
Sbjct: 77 PAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRMAANKAV 136
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVK 192
+ + E +A+ ++ +++L A T+++ K D ++LVVEAV+ V ++ + +
Sbjct: 137 EIL-ESIAMDIDVEDEETLKKIAATAITGKHSEYALDHLSSLVVEAVKRV---AEKVDDR 192
Query: 193 YPIKGINIL--KAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250
Y + NI K G S D+ +NG ++ GMP RV AKIA L L+ + +
Sbjct: 193 YKVDEDNIKLEKRQGGSVADTKLVNGIVIDKEVVHPGMPKRVKNAKIAVLKAALEVKETE 252
Query: 251 LGVQVLVTDPRELEKI 266
++ +TDP +L K
Sbjct: 253 TDAEIRITDPDQLMKF 268
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 164/253 (64%), Gaps = 6/253 (2%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R+ G++ + N+ A +A+A+ V+++LGP G+DKMLVD IGD+ I+NDGATILK ++VEH
Sbjct: 16 QREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEH 75
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
P AK++VE+++ QD VGDGTT+ V+++ ELLK+A L+ +HPT I +GYRLA+ EA
Sbjct: 76 PTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEAR 135
Query: 133 KYVNEKLAVKVEKLGKD-SLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEV 191
K ++E EK D +L A T++S K G +DF A+LVV+AV AV + G+
Sbjct: 136 KIIDE----IAEKSTDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEV-RDGKT 190
Query: 192 KYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL 251
I + K +G S D+ F++G ++ + MP V AKIA +D L+ K ++
Sbjct: 191 IVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEI 250
Query: 252 GVQVLVTDPRELE 264
+V ++DP +++
Sbjct: 251 EAKVQISDPSKIQ 263
>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
Length = 552
Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 160/252 (63%), Gaps = 4/252 (1%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G++ N+ A +AV +KS+ GP G+DKMLVD +GD+TITNDGATIL ++++HP
Sbjct: 25 RTYGKEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHP 84
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+LV++A+ QD E DGT + VI+A EL+K+A +L+ +IHPT I+SG++ A +A K
Sbjct: 85 AAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPTIIVSGFKKAEEQALK 144
Query: 134 YVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKY 193
+ E++A KV D L A TS++SK + G ++ A++V +AV V RG+ Y
Sbjct: 145 TI-EEIAQKVSVNDMDILKKVAMTSLNSKAVAGAREYLADIVAKAVTQV--AELRGDRWY 201
Query: 194 -PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLG 252
+ I I+K HG S D+ + G ++ GMP RV AKIA LD +L+ K +L
Sbjct: 202 VDLDNIQIVKKHGGSINDTQIIYGIVVDKEVVHPGMPKRVENAKIALLDASLEVEKPELD 261
Query: 253 VQVLVTDPRELE 264
++ + DP +++
Sbjct: 262 AEIRINDPTQMK 273
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 187 bits (476), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 169/265 (63%), Gaps = 5/265 (1%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPILILPEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELLK+A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA ++A + ++ +A +V+ ++ L+ A T+++ K + ++ A L VEAV
Sbjct: 124 IIKGYTLASQKAQEILD-SIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVEAV 182
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
+ V + G++K I I + K G + RD+ + G ++ GMP R+ AKIA
Sbjct: 183 KLV-AEEKDGKLKVDIDNIKLEKKEGGAVRDTRLIRGVVIDKEVVHPGMPKRIENAKIAL 241
Query: 240 LDFNLQKTKMQLGVQVLVTDPRELE 264
++ L+ + + ++ +T P +L+
Sbjct: 242 INDALEVKETETDAEIRITSPEQLQ 266
>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
Length = 559
Score = 187 bits (475), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 161/260 (61%), Gaps = 9/260 (3%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R +G+D N++A +A ++KSSLGP GLDKML+D GDVTITNDGATI+K +E++H
Sbjct: 14 QRSSGRDALKNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQH 73
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+LVE A+ QD EVGDGTTS V++A LL +A+DL+ IHPT II GY+ A+ ++
Sbjct: 74 PAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKADDLLDQNIHPTIIIEGYKKALNKSL 133
Query: 133 KYVNEKLAVKVEKLG------KDSLVNCAKTSMSSKLIGG--DSDFFANLVVEAVQAVKM 184
+ +++ LA K++ +D L T+MSSK I G + D N+V++AV V
Sbjct: 134 EIIDQ-LATKIDVSNLNSLATRDQLKKIVYTTMSSKFIAGGEEMDKIMNMVIDAVSIVAE 192
Query: 185 TNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNL 244
G P+ I I K G S DS ++G L+ GMP RV AKIA LD L
Sbjct: 193 PLPEGGYNVPLDLIKIDKKKGGSIEDSMLVHGLVLDKEVVHPGMPRRVEKAKIAVLDAAL 252
Query: 245 QKTKMQLGVQVLVTDPRELE 264
+ K ++ ++ +T P +++
Sbjct: 253 EVEKPEISAKISITSPEQIK 272
>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
Length = 554
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 154/254 (60%), Gaps = 4/254 (1%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G++ N+ A +A+ +KS+ GP G+DKMLVD +GD+TITNDGATIL ++++HP
Sbjct: 24 RTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHP 83
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
K+LV++A+ QD E DGT + VI+A EL K+A DL+ +IHPT I+SGY+ A A K
Sbjct: 84 TGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALK 143
Query: 134 YVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKY 193
+ E +A V D L A TS+ SK + G ++ A+LVV+AV V RG+ Y
Sbjct: 144 TIQE-IAQPVTINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAVAQV--AELRGDKWY 200
Query: 194 -PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLG 252
+ + I+K HG S D+ + G ++ GMP R+ AKIA LD +L+ K +L
Sbjct: 201 VDLDNVQIVKKHGGSVNDTQLVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPELD 260
Query: 253 VQVLVTDPRELEKI 266
++ + DP ++ K
Sbjct: 261 AEIRINDPTQMHKF 274
>sp|P48425|THSB_THEAC Thermosome subunit beta OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsB PE=1 SV=1
Length = 543
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 163/267 (61%), Gaps = 5/267 (1%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
I+ Q + IL E R++G+D +N+ A A++N V+SSLGP G+DKMLVD +GD+ ITN
Sbjct: 2 IAGQPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITN 61
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DG TILK ++VEHPAAK++VE+++ QD VGDGTT+ VI+A LL++A L+ +HPT
Sbjct: 62 DGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTV 121
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
I GYR+A EA + ++E ++ K+ K L+ A+TS++SK D A + EAV
Sbjct: 122 ISEGYRMASEEAKRVIDE-ISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAV 180
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
++V + G+ I ++K G + D+ +NG ++ + GMP V AKIA
Sbjct: 181 KSVAEL-RDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIAL 239
Query: 240 LDFNLQKTKMQLGVQVLVTDPRELEKI 266
LD L+ K + + + DP ++K
Sbjct: 240 LDAPLEIKKPEFDTNLRIEDPSMIQKF 266
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 169/267 (63%), Gaps = 11/267 (4%)
Query: 1 MAISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTI 57
MA Q + +L E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ +
Sbjct: 1 MAQGQQPILVLPEGTSRYLGRDAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVV 60
Query: 58 TNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHP 117
TNDG TILK +++EHPAAK+LVE+A+ Q+ EVGDGTT+ VI+A ELLK+A +L+ +IHP
Sbjct: 61 TNDGVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHP 120
Query: 118 TSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVE 177
T I GYR A +A + +++ + ++ +D+L+ A T+M+ K + A L+V+
Sbjct: 121 TIIAMGYRQAAEKAQEILDD---IAIDASDRDTLMKVAMTAMTGKGTEKAREPLAELIVD 177
Query: 178 AVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKI 237
AV+ V+ + GEV+ I I K G + DS + G ++ R GMP +V AKI
Sbjct: 178 AVKQVE---EDGEVEK--DHIKIEKKEGAAVDDSTLVQGVIIDKERVHPGMPKKVENAKI 232
Query: 238 ACLDFNLQKTKMQLGVQVLVTDPRELE 264
A L+ ++ + ++ ++ +TDP +++
Sbjct: 233 ALLNCPIEVKETEVDAEIRITDPSQMQ 259
>sp|Q9V2T4|THSB_SULAC Thermosome subunit beta OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsB PE=3 SV=2
Length = 553
Score = 185 bits (470), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 159/254 (62%), Gaps = 4/254 (1%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G++ N+ A +AV +K++ GP G+DKMLVD +GD+TITNDGATIL ++++HP
Sbjct: 25 RTYGKEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHP 84
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+LV++A+ QD E DGT + VI + EL+K+A +L+ +IHPT I+SGY+ A A K
Sbjct: 85 AAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGYKKAEEMAIK 144
Query: 134 YVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKY 193
+ E+++ KV + L A TS+SSK + G + A++VV+A+ V RG+ Y
Sbjct: 145 TI-EEISTKVSVNDTEILRKVALTSLSSKAVAGAREHLADIVVKAITQV--AELRGDKWY 201
Query: 194 -PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLG 252
+ + I+K HG S D+ + G ++ GMP RV AKIA LD +L+ K +L
Sbjct: 202 VDLDNVQIVKKHGGSINDTQIVYGIIVDKEVVHPGMPKRVENAKIALLDASLEVEKPELD 261
Query: 253 VQVLVTDPRELEKI 266
++ + DP +++K
Sbjct: 262 AEIRINDPTQMKKF 275
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 184 bits (466), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 165/265 (62%), Gaps = 5/265 (1%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPILILPEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELLK+A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
+I GY LA +A + ++ +A +V+ ++ L+ A T+++ K + ++ A L VEAV
Sbjct: 124 VIKGYMLAAEKAQEILD-SIAKEVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVEAV 182
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
+ V + G+ K I I K G + D+ + G ++ GMP RV AKIA
Sbjct: 183 KLV-AEEKDGKFKVDIDNIKFEKKEGGAVSDTKLIRGVVIDKEVVHPGMPKRVEKAKIAL 241
Query: 240 LDFNLQKTKMQLGVQVLVTDPRELE 264
++ L+ + + ++ +T P +L+
Sbjct: 242 INDALEVKETETDAEIRITSPEQLQ 266
>sp|Q9V2S9|THSA_SULSO Thermosome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsA PE=3 SV=2
Length = 559
Score = 184 bits (466), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 157/259 (60%), Gaps = 9/259 (3%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G+D N++A + +A +++SSLGP GLDKML+D GDVTITNDGATI+K +E++HP
Sbjct: 14 RTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHP 73
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+LVE A+ QD EVGDGTTS V++A LL++A L+ IHPT II GY+ A +A +
Sbjct: 74 AAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALE 133
Query: 134 YVNEKLAVKVE------KLGKDSLVNCAKTSMSSKLI--GGDSDFFANLVVEAVQAVKMT 185
+ + L +++ + +D+L A T+++SK I G + + ++V++A+ V
Sbjct: 134 LLPQ-LGTRIDIKDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEP 192
Query: 186 NQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQ 245
G + I I K G S DS + G L+ GMP RV AKIA LD L+
Sbjct: 193 LPNGGYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALE 252
Query: 246 KTKMQLGVQVLVTDPRELE 264
K ++ ++ +T P +++
Sbjct: 253 VEKPEISAKISITSPEQIK 271
>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
Length = 560
Score = 184 bits (466), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 157/259 (60%), Gaps = 9/259 (3%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G+D N++A + +A +++SSLGP GLDKML+D GDVTITNDGATI+K +E++HP
Sbjct: 14 RTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHP 73
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+LVE A+ QD EVGDGTTS V++A LL++A L+ IHPT II GY+ A +A +
Sbjct: 74 AAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALE 133
Query: 134 YVNEKLAVKVE------KLGKDSLVNCAKTSMSSKLI--GGDSDFFANLVVEAVQAVKMT 185
+ + L +++ + +D+L A T+++SK I G + + ++V++A+ V
Sbjct: 134 LLPQ-LGTRIDIRDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAIVNVAEP 192
Query: 186 NQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQ 245
G + I I K G S DS + G L+ GMP RV AKIA LD L+
Sbjct: 193 LPNGGYNVSLDLIKIDKKKGGSIEDSVLVKGLVLDKEVVHPGMPRRVTKAKIAVLDAALE 252
Query: 246 KTKMQLGVQVLVTDPRELE 264
K ++ ++ +T P +++
Sbjct: 253 VEKPEISAKISITSPEQIK 271
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 162/250 (64%), Gaps = 5/250 (2%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G+D + N++A + + V+S+LGP G+DKMLVDD+GD+ +TNDG TILK + VEHP
Sbjct: 16 RFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGVTILKEMSVEHP 75
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+L+E+A+ Q++EVGDGTT+ V++A ELL++A +L+ +HPT +I GY+LA+++A +
Sbjct: 76 AAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQE 135
Query: 134 YVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKY 193
+ E +A+ V+ K+ L A TS++ K + ++VEAV AV ++ G+V
Sbjct: 136 VLKE-IAMDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTAV--VDESGKVDK 192
Query: 194 PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGV 253
+ I I K G S ++ +NG ++ R + MP ++ AKIA L+ ++ + +
Sbjct: 193 DL--IKIEKKEGASVDETELINGVLIDKERVSPQMPKKIENAKIALLNCPIEVKETETDA 250
Query: 254 QVLVTDPREL 263
++ +TDP +L
Sbjct: 251 EIRITDPTKL 260
>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1
Length = 552
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 153/254 (60%), Gaps = 4/254 (1%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G++ N+ A +A+ +KS+ GP G+DKM VD +GD+TITNDGATIL ++++HP
Sbjct: 24 RTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITITNDGATILDKMDLQHP 83
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
K+LV++A+ QD E DGT + VI+A EL K+A DL+ +IHPT I+SGY+ A A K
Sbjct: 84 TGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALK 143
Query: 134 YVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKY 193
+ + +A V D L A TS+ SK + G ++ A+LVV+AV V RG+ Y
Sbjct: 144 TIQD-IAQPVSINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAVAQV--AELRGDKWY 200
Query: 194 -PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLG 252
+ + I+K HG S D+ + G ++ GMP R+ AKIA LD +L+ K +L
Sbjct: 201 VDLDNVQIVKKHGGSINDTQLVYGIVVDKEVVHPGMPKRIENAKIALLDASLEVEKPELD 260
Query: 253 VQVLVTDPRELEKI 266
++ + DP ++ K
Sbjct: 261 AEIRINDPTQMHKF 274
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 182 bits (461), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 165/266 (62%), Gaps = 7/266 (2%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA +A + ++E +A V+ ++ L A TS++ K + ++ A + VEAV
Sbjct: 124 IIKGYALAAEKAQEILDE-IAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAV 182
Query: 180 QAVKMTNQRGEV-KYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIA 238
+ V + GE K + I K G S +D+ + G ++ GMP RV AKIA
Sbjct: 183 KQV--AEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIA 240
Query: 239 CLDFNLQKTKMQLGVQVLVTDPRELE 264
++ L+ + + ++ +T P +L+
Sbjct: 241 LINEALEVKETETDAEIRITSPEQLQ 266
>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct1 PE=1 SV=1
Length = 560
Score = 182 bits (461), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 160/264 (60%), Gaps = 9/264 (3%)
Query: 6 QTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGA 62
Q + ILGE R +GQD ++ N+ A +AVA V+++LGP G+DKMLVD G V +TNDG
Sbjct: 9 QPMIILGEDSQRTSGQDAQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGGQVVVTNDGV 68
Query: 63 TILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIIS 122
TILK ++++HPAA ++VE++E Q+ EVGDGTT+ VI A ELL +A DL+ + +H T+I
Sbjct: 69 TILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDVHATTIAQ 128
Query: 123 GYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAV 182
GYR A E K V E A++V + +++L A T+M+ K D + LVV+AV AV
Sbjct: 129 GYRQAA-EKAKEVLEDNAIEVTEDDRETLTKIAATAMTGKGAESAKDLLSELVVDAVLAV 187
Query: 183 KMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDF 242
K + ++I K G + +S + G ++ R + MP V A IA LD
Sbjct: 188 KDDD-----GIDTNNVSIEKVVGGTIDNSELVEGVIVDKERVDENMPYAVEDANIAILDD 242
Query: 243 NLQKTKMQLGVQVLVTDPRELEKI 266
L+ + ++ +V VTDP +L++
Sbjct: 243 ALEVRETEIDAEVNVTDPDQLQQF 266
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 182 bits (461), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 165/266 (62%), Gaps = 7/266 (2%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA +A + ++E +A V+ ++ L A TS++ K + ++ A + VEAV
Sbjct: 124 IIKGYALAAEKAQEILDE-IAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAV 182
Query: 180 QAVKMTNQRGEV-KYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIA 238
+ V + GE K + I K G S +D+ + G ++ GMP RV AKIA
Sbjct: 183 KQV--AEKVGETYKVDLDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMPKRVEGAKIA 240
Query: 239 CLDFNLQKTKMQLGVQVLVTDPRELE 264
++ L+ + + ++ +T P +L+
Sbjct: 241 LINEALEVKETETDAEIRITSPEQLQ 266
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 163/267 (61%), Gaps = 11/267 (4%)
Query: 1 MAISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTI 57
MA Q + IL + R G++ + N++A + +A V+++LGP G+DKMLVD +GD+ I
Sbjct: 1 MAQGQQPIFILPQDTSRYVGREAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVI 60
Query: 58 TNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHP 117
TNDG TIL+ +++ HPAAK+LVE+A+ Q+ EVGDGTT+ VI+A ELLK A L+ +HP
Sbjct: 61 TNDGVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHP 120
Query: 118 TSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVE 177
T I GYR A +A + + E + +E +D+L+ A T+M+ K + A LVV+
Sbjct: 121 TIIALGYRNAALKAQEILEE---ISMEASDRDTLMKVAITAMTGKGSERAKEKLAELVVD 177
Query: 178 AVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKI 237
AV V+ + GE+ INI + G S +S +NG ++ RA MP R+ A+I
Sbjct: 178 AVMQVE---EDGEIDK--DNINIQRIQGASVNESRIVNGIVIDKSRADTSMPKRIEKARI 232
Query: 238 ACLDFNLQKTKMQLGVQVLVTDPRELE 264
A L + ++ ++ ++ +TDP +++
Sbjct: 233 ALLKYPIEVKDLETDAKIRLTDPSQMQ 259
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 163/264 (61%), Gaps = 5/264 (1%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
+S Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ +TN
Sbjct: 4 LSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA +A + ++E +A++V+ +++L+ A TS++ K + A L VEAV
Sbjct: 124 IIKGYALAAEKAQEILDE-IAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAV 182
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
+ V + G+ + I K G+ +S + G ++ MP RV AKIA
Sbjct: 183 KQV-AEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIAL 241
Query: 240 LDFNLQKTKMQLGVQVLVTDPREL 263
++ L+ K + ++ +T P +L
Sbjct: 242 INEALEVKKTETDAKINITSPDQL 265
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 163/264 (61%), Gaps = 5/264 (1%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
+S Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ +TN
Sbjct: 4 LSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA +A + ++E +A++V+ +++L+ A TS++ K + A L VEAV
Sbjct: 124 IIKGYALAAEKAQEILDE-IAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAV 182
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
+ V + G+ + I K G+ +S + G ++ MP RV AKIA
Sbjct: 183 KQV-AEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIAL 241
Query: 240 LDFNLQKTKMQLGVQVLVTDPREL 263
++ L+ K + ++ +T P +L
Sbjct: 242 INEALEVKKTETDAKINITSPDQL 265
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 162/266 (60%), Gaps = 7/266 (2%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + VA ++++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPVVILPEGTQRYVGRDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELLK+A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA E + + E +A +V ++L A TS++ K + ++ A + VEAV
Sbjct: 124 IIKGYALAA-EKAQEILEGIAKEVSPDDVETLKKAAVTSITGKAAEEEREYLAEIAVEAV 182
Query: 180 QAVKMTNQRGE-VKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIA 238
+ V + G+ K + I K G S ++ + G ++ GMP RV AKIA
Sbjct: 183 RQV--AEKVGDKYKVDLDNIKFEKKEGASVHETQLIRGVVIDKEVVHPGMPKRVENAKIA 240
Query: 239 CLDFNLQKTKMQLGVQVLVTDPRELE 264
++ L+ + + ++ +T P +L+
Sbjct: 241 LINDALEVKETETDAEIRITSPEQLQ 266
>sp|O24731|THSA_THEK8 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA
PE=3 SV=1
Length = 549
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 162/266 (60%), Gaps = 9/266 (3%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
+S Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ +TN
Sbjct: 4 LSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA E + + E++A+KV +++L+ A TS++ K + A L AV
Sbjct: 124 IIKGYALAA-EKAQEILEEIAIKVNPDDEETLLRIAMTSITGKNAESHKELLAKL---AV 179
Query: 180 QAVKMTNQRGEVKY--PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKI 237
AVK ++ + KY + I K G+ +S + G ++ MP RV AKI
Sbjct: 180 DAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEGAKI 239
Query: 238 ACLDFNLQKTKMQLGVQVLVTDPREL 263
A ++ L+ K + ++ +T P +L
Sbjct: 240 ALINEALEVKKTETDAKINITSPDQL 265
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 174 bits (442), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 158/250 (63%), Gaps = 4/250 (1%)
Query: 14 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP 73
R G+D + N++A + +A V+++LGP G+DKMLVD++GD+ +TNDG TILK + VEHP
Sbjct: 17 RYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILKEMSVEHP 76
Query: 74 AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACK 133
AAK+L+E+A+ Q++EVGDGTT+ V++A ELL++A +L+ IHP+ II+GY +A +A +
Sbjct: 77 AAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNKAVE 136
Query: 134 YVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKY 193
+ +A +V+ + L A TS++ K + A +VVEAV+AV + + G+V
Sbjct: 137 ELK-SIAKEVKPEDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRAV-VDEETGKVDK 194
Query: 194 PIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGV 253
+ I + K G ++ + G ++ R MP +V AKIA L+ ++ + +
Sbjct: 195 DL--IKVEKKEGAPIEETKLIRGVVIDKERVNPQMPKKVENAKIALLNCPIEVKETETDA 252
Query: 254 QVLVTDPREL 263
++ +TDP +L
Sbjct: 253 EIRITDPAKL 262
>sp|Q9V2T7|THSG_SULSO Thermosome subunit gamma OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsC PE=3 SV=1
Length = 535
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 154/254 (60%), Gaps = 5/254 (1%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R G +V N+ + + ++KSSLGP GLDKMLV+ DVTITNDGATI+K +EV+H
Sbjct: 10 QRSTGNEVILNNIAVAKILLEMLKSSLGPKGLDKMLVEG-QDVTITNDGATIVKNMEVQH 68
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
P AK+L+E A+ D EVGDGTTSVV++A LL++A DL+ KIHPT II GYR A+ +
Sbjct: 69 PTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALNSSL 128
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDF--FANLVVEAVQAVKMTNQRGE 190
+ + + +A K+ + + + T++SSK + NLV++A AV + + G
Sbjct: 129 ELL-KNIADKISPEDRKIVHDLVYTTLSSKFFSTEHTLEKIINLVIDASLAV-LDKRDGS 186
Query: 191 VKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250
IK I I+K +G DS +NG ++ + MP RV K+ DF L+ K +
Sbjct: 187 YDLDIKNIKIVKVNGGEFDDSELINGIVVDKEPTNENMPKRVENVKVMLADFPLKLEKTE 246
Query: 251 LGVQVLVTDPRELE 264
+ +++ ++DP +++
Sbjct: 247 ISMKLGISDPTQIK 260
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 171 bits (434), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 161/266 (60%), Gaps = 7/266 (2%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
++ Q + IL E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITN
Sbjct: 4 LAGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITN 63
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+
Sbjct: 64 DGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSI 123
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
II GY LA +A + ++ +A V+ ++ L A T+++ K + ++ A + VEAV
Sbjct: 124 IIKGYALAAEKAQEILD-SIARDVDVEDREILKKAAMTAITGKAAEEEREYLAEIAVEAV 182
Query: 180 -QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIA 238
Q + R V + I K G S +D+ + G ++ GM RV AKIA
Sbjct: 183 KQVAEKVGDRYHVD--LDNIKFEKKEGGSVKDTQLIKGVVIDKEVVHPGMRKRVEGAKIA 240
Query: 239 CLDFNLQKTKMQLGVQVLVTDPRELE 264
++ L+ + + ++ +T P +L+
Sbjct: 241 LINEALEVKETETDAEIRITSPEQLQ 266
>sp|Q9HN70|THSA_HALSA Thermosome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=thsA PE=3 SV=2
Length = 562
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 157/267 (58%), Gaps = 9/267 (3%)
Query: 3 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITN 59
+ +Q L +L E R +G+D ++ N+ A +AVA V+++LGP G+DKMLVD G+V +TN
Sbjct: 5 MGNQPLIVLSEDSQRTSGEDAQSMNITAGKAVAESVRTTLGPKGMDKMLVDSSGEVVVTN 64
Query: 60 DGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTS 119
DG TILK +++EHPAA ++VE+AE Q+ EVGDGTT+ V+V+ ELL A L+ IH T+
Sbjct: 65 DGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHATT 124
Query: 120 IISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAV 179
+ GYR A +A + +++ A+ V ++L A T+M+ K ++LVV AV
Sbjct: 125 LAQGYRQAAEKAKELLDDA-AIDVSADDTETLEKIAATAMTGKGAENAKGVLSDLVVRAV 183
Query: 180 QAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239
Q+V N ++ K G + +S + G ++ R ++ MP V A IA
Sbjct: 184 QSVADDNDVDTDNVKVE-----KVTGGAIENSELIEGVIVDKERVSENMPYAVEDANIAL 238
Query: 240 LDFNLQKTKMQLGVQVLVTDPRELEKI 266
+D L+ + ++ +V VTDP +L+
Sbjct: 239 VDDGLEVQETEIDTEVNVTDPDQLQNF 265
>sp|P50999|TCPD_SCHPO T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct4 PE=2 SV=2
Length = 527
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/256 (40%), Positives = 156/256 (60%), Gaps = 6/256 (2%)
Query: 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEH 72
+R+ Q+VR N+MA ++VA+ +++SLGP G+DKM+ G+V +TNDGATILK L V H
Sbjct: 13 DREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLH 72
Query: 73 PAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREAC 132
PAAK+LV+L+ QD E GDGTTSVVI+A +L A L++ IHPT I ++ A
Sbjct: 73 PAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTV 132
Query: 133 KYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVK 192
+ E A+ +E ++SL+ A TS++SK++ S+ A + V+AV +K+ + R
Sbjct: 133 DCMKEN-ALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAV--LKVIDPRVATN 189
Query: 193 YPIKGINILKAHGKSARDSYFLNGYAL--NAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250
+K I I+K G D+ + G AL A ++A G P R+ A IA + F L K
Sbjct: 190 VDLKDIRIVKKLGGIIDDTELIPGLALTQTAVKSAGG-PTRIEKANIALIQFQLSPPKPD 248
Query: 251 LGVQVLVTDPRELEKI 266
+ QV+V D R+++KI
Sbjct: 249 MENQVVVNDYRQMDKI 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,046,725
Number of Sequences: 539616
Number of extensions: 3305615
Number of successful extensions: 13021
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 10513
Number of HSP's gapped (non-prelim): 1369
length of query: 269
length of database: 191,569,459
effective HSP length: 115
effective length of query: 154
effective length of database: 129,513,619
effective search space: 19945097326
effective search space used: 19945097326
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)