Query 024330
Match_columns 269
No_of_seqs 132 out of 1422
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 06:22:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024330.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024330hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ko1_A Chaperonin; 9-fold symm 100.0 2.8E-63 9.5E-68 477.5 28.7 264 3-268 11-277 (553)
2 3iyg_A T-complex protein 1 sub 100.0 9.4E-63 3.2E-67 472.3 28.9 256 12-268 3-259 (529)
3 1q3q_A Thermosome alpha subuni 100.0 2.4E-62 8.1E-67 471.1 26.5 262 5-268 6-270 (548)
4 3ruv_A Chaperonin, CPN; double 100.0 2.1E-62 7.1E-67 471.0 25.5 260 3-268 1-263 (543)
5 1a6d_B Thermosome (beta subuni 100.0 1.4E-62 4.8E-67 472.5 23.9 263 4-268 3-268 (543)
6 1a6d_A Thermosome (alpha subun 100.0 6.5E-62 2.2E-66 467.8 25.5 258 7-268 7-267 (545)
7 3p9d_D T-complex protein 1 sub 100.0 5.8E-62 2E-66 466.5 24.6 261 4-268 4-265 (528)
8 3iyg_G T-complex protein 1 sub 100.0 1.8E-61 6.3E-66 462.1 27.3 254 13-268 3-257 (515)
9 3iyg_H T-complex protein 1 sub 100.0 5.6E-61 1.9E-65 458.5 28.3 248 13-268 5-259 (515)
10 3p9d_G T-complex protein 1 sub 100.0 5.7E-62 1.9E-66 468.4 20.4 259 3-268 5-272 (550)
11 3iyg_D T-complex protein 1 sub 100.0 1E-60 3.5E-65 457.2 26.6 254 11-268 3-256 (518)
12 3p9d_A T-complex protein 1 sub 100.0 2E-61 6.8E-66 465.4 21.7 256 12-268 17-275 (559)
13 3iyg_Z T-complex protein 1 sub 100.0 1.4E-60 4.9E-65 455.9 25.6 251 12-268 3-253 (517)
14 3iyg_B T-complex protein 1 sub 100.0 4.5E-60 1.5E-64 452.3 27.7 247 13-268 4-256 (513)
15 3p9d_C T-complex protein 1 sub 100.0 2.1E-61 7.3E-66 466.2 17.0 263 5-268 2-274 (590)
16 3iyg_E T-complex protein 1 sub 100.0 1.3E-59 4.5E-64 449.5 27.6 252 13-268 4-257 (515)
17 3p9d_E T-complex protein 1 sub 100.0 4.2E-60 1.4E-64 456.4 23.6 261 4-268 25-300 (562)
18 3p9d_F T-complex protein 1 sub 100.0 2.4E-60 8.1E-65 457.3 16.5 253 12-268 10-264 (546)
19 3p9d_H T-complex protein 1 sub 100.0 5.9E-59 2E-63 448.9 24.8 258 7-268 10-278 (568)
20 3iyg_Q T-complex protein 1 sub 100.0 5.1E-58 1.7E-62 438.2 27.2 247 13-267 4-253 (512)
21 3p9d_B T-complex protein 1 sub 100.0 1.3E-58 4.6E-63 443.6 19.5 247 13-268 11-263 (527)
22 3aq1_B Thermosome subunit; gro 100.0 3.6E-51 1.2E-55 389.7 12.9 220 47-268 1-221 (500)
23 1kp8_A Groel protein; chaperon 100.0 4E-49 1.4E-53 378.0 23.4 212 13-245 4-227 (547)
24 1we3_A CPN60(groel); chaperoni 100.0 9E-49 3.1E-53 375.7 23.2 221 13-268 4-236 (543)
25 1iok_A Chaperonin 60; chaperon 100.0 3E-49 1E-53 378.9 19.6 214 12-246 4-229 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 3.6E-49 1.2E-53 377.6 16.6 213 12-245 3-226 (546)
27 1gml_A T-complex protein 1 sub 99.3 5.8E-13 2E-17 110.1 4.3 61 208-268 1-61 (178)
28 1ass_A Thermosome; chaperonin, 99.0 1.9E-11 6.6E-16 99.1 -0.4 55 214-268 1-55 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 95.3 0.0031 1.1E-07 51.7 0.0 36 211-246 2-44 (194)
30 1srv_A Protein (groel (HSP60 c 93.3 0.025 8.7E-07 44.2 1.4 31 216-246 1-38 (145)
31 3osx_A 60 kDa chaperonin; alph 92.9 0.038 1.3E-06 45.4 1.9 31 215-245 13-50 (201)
32 2ooa_A E3 ubiquitin-protein li 25.5 1.3E+02 0.0044 18.9 4.7 33 105-137 13-48 (52)
33 1bh9_B TAFII28; histone fold, 22.3 1.1E+02 0.0039 21.3 4.2 30 98-127 48-82 (89)
34 2d9s_A CBL E3 ubiquitin protei 20.8 1.7E+02 0.0057 18.4 4.4 32 107-138 13-47 (53)
No 1
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2.8e-63 Score=477.49 Aligned_cols=264 Identities=39% Similarity=0.576 Sum_probs=239.0
Q ss_pred cccccccchh---hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHH
Q 024330 3 ISSQTLDILG---ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLV 79 (269)
Q Consensus 3 ~~~~~~~~~~---~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~ 79 (269)
|.++|..+++ ++.+|.+++..|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 11 ~~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~ 90 (553)
T 3ko1_A 11 PEGIPVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLV 90 (553)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHH
T ss_pred CCCCeEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHH
Confidence 5667888886 4689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhh
Q 024330 80 ELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSM 159 (269)
Q Consensus 80 ~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l 159 (269)
++|++||+++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++ +++++..+++.|.++++|++
T Consensus 91 e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~d~e~L~~vA~tsl 169 (553)
T 3ko1_A 91 QIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQEL-AQTVSINDTDLLRKIAMTSL 169 (553)
T ss_dssp HHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CEECCTTCHHHHHHHHHHHH
T ss_pred HHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHh-cCCCCCCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999998 99987657899999999999
Q ss_pred cccccCCchhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEE
Q 024330 160 SSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239 (269)
Q Consensus 160 ~sk~~~~~~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i 239 (269)
+||+.+.++++|++|++||+.++... .+|...+|+++|+|++..|+++.||++++|++|++++.|++||++++||||++
T Consensus 170 ~sK~~~~~~~~i~~livdAv~~V~~~-~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll 248 (553)
T 3ko1_A 170 SSKAVAGAREYIADIVVKAVTQVAEL-RGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIAL 248 (553)
T ss_dssp TTSSCCTTHHHHHHHHHHHHHHHCCC-TTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEE
T ss_pred hHHhhhhHHHHHHHHHHHHHHHHHHh-cCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccccceEEE
Confidence 99999999999999999999999642 23544688999999999999999999999999999999999999999999999
Q ss_pred EeccCCccccccCcEEEECCHHHHHHHHh
Q 024330 240 LDFNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 240 ~~~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
+||||+++++++++++.+++++++++|++
T Consensus 249 ~d~~Le~~k~e~~~~v~Iss~~~l~~~~~ 277 (553)
T 3ko1_A 249 IDASLEVEKPELDAEIRINDPTQMQKFLD 277 (553)
T ss_dssp ECSCBSCCCCTTTCCCCCCSHHHHHHHHH
T ss_pred ecCcccccCcccCceEEeCCHHHHHHHHH
Confidence 99999999999999999999999988764
No 2
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.4e-63 Score=472.34 Aligned_cols=256 Identities=69% Similarity=1.061 Sum_probs=243.5
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHhhccccccC
Q 024330 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (269)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GD 91 (269)
.++.+|.+++.+|+.||+.|++++++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GD 82 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGD 82 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhh-hhccccccCChhhhHHHHHHhhcccccCCchhH
Q 024330 92 GTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE-KLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDF 170 (269)
Q Consensus 92 Gttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~-~~s~~v~~~~~~~l~~i~~t~l~sk~~~~~~~~ 170 (269)
||||+++|+++||+++.+++++|+||+.|++||++|++.++++|++ + +++++..+++.|.++|+|+++||+.++++++
T Consensus 83 GTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~-s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~ 161 (529)
T 3iyg_A 83 GTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENL-IINTDELGRDCLINAAKTSMSSKVIGINGDF 161 (529)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCCCHHHHHHHHHHHhccCcccccHHH
Confidence 9999999999999999999999999999999999999999999998 6 8988766789999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEEeccCCccccc
Q 024330 171 FANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250 (269)
Q Consensus 171 l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~k~~ 250 (269)
|+++++||+.++.+..++|...||+++|+|++..|++++||++++|++|++++.|++||++++||||++++|||++++++
T Consensus 162 i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~~k~e 241 (529)
T 3iyg_A 162 FANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMK 241 (529)
T ss_pred HHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCccccccc
Confidence 99999999999964334454468888999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEECCHHHHHHHHh
Q 024330 251 LGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 251 ~~~~v~i~~~~~~~~~~~ 268 (269)
.+++|.+++++++++|.+
T Consensus 242 ~~~~v~i~~~~~~~~i~~ 259 (529)
T 3iyg_A 242 LGVQVVITDPEKLDQIRQ 259 (529)
T ss_pred CCceEEeCCHHHHHHHHH
Confidence 999999999999998864
No 3
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.4e-62 Score=471.10 Aligned_cols=262 Identities=36% Similarity=0.594 Sum_probs=244.8
Q ss_pred cccccchh---hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHH
Q 024330 5 SQTLDILG---ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVEL 81 (269)
Q Consensus 5 ~~~~~~~~---~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~ 81 (269)
+.|..+++ +..+|.+++..|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++
T Consensus 6 ~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 85 (548)
T 1q3q_A 6 GQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEV 85 (548)
T ss_dssp ---CCCSCTTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHHH
T ss_pred CCCcccccCCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHHHH
Confidence 35766665 468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhcc
Q 024330 82 AELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSS 161 (269)
Q Consensus 82 ~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~s 161 (269)
|++||+++||||||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +++++..+++.|.++++|+++|
T Consensus 86 a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~d~~~l~~va~tsl~s 164 (548)
T 1q3q_A 86 AKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEI-AIRVDPDDEETLLKIAATSITG 164 (548)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH-CEECCTTCHHHHHHHHHHHSCS
T ss_pred HHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCCHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999999998 9998766789999999999999
Q ss_pred cccCCchhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEEe
Q 024330 162 KLIGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLD 241 (269)
Q Consensus 162 k~~~~~~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~ 241 (269)
|+.++++++|+++++||+.++.+.. .|...+|+++|+|+++.|++++||++++|++|++++.|++||++++||||+++|
T Consensus 165 Ki~~~~~~~i~~livdAv~~V~~~~-~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~ 243 (548)
T 1q3q_A 165 KNAESHKELLAKLAVEAVKQVAEKK-DGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALIN 243 (548)
T ss_dssp STTGGGHHHHHHHHHHHHHHHCEES-SSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEEEC
T ss_pred cccccchHHHHHHHHHHHHHhcccc-CCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEEEEe
Confidence 9999999999999999999996431 133468889999999999999999999999999999999999999999999999
Q ss_pred ccCCccccccCcEEEECCHHHHHHHHh
Q 024330 242 FNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 242 ~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
|+||+++++.+++|.+++++++++|++
T Consensus 244 ~~Le~~k~e~~~~v~i~~~~~l~~~~~ 270 (548)
T 1q3q_A 244 EALEVKKTETDAKINITSPDQLMSFLE 270 (548)
T ss_dssp SCBSCCCCSSCCCEEECSHHHHHHHHH
T ss_pred cCcCcccccCCceEEeCCHHHHHHHHH
Confidence 999999999999999999999987764
No 4
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.1e-62 Score=471.04 Aligned_cols=260 Identities=39% Similarity=0.606 Sum_probs=243.8
Q ss_pred cccccccchh---hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHH
Q 024330 3 ISSQTLDILG---ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLV 79 (269)
Q Consensus 3 ~~~~~~~~~~---~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~ 79 (269)
|.++| .+++ ++.+|.+++.+|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 1 ~~~~p-~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~ 79 (543)
T 3ruv_A 1 MSQQP-GVLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLI 79 (543)
T ss_dssp ---CC-CSSCSSEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHH
T ss_pred CCCCC-eeecCCcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHH
Confidence 34567 6665 4679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhh
Q 024330 80 ELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSM 159 (269)
Q Consensus 80 ~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l 159 (269)
++|++||+++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++ +++++..+++.|.++|+|++
T Consensus 80 e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~d~~~L~~va~tsl 158 (543)
T 3ruv_A 80 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTI-ACEVGAQDKEILTKIAMTSI 158 (543)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHH-CEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHh-hCCCCCCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999998 99987657899999999999
Q ss_pred cccccCCchhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEE
Q 024330 160 SSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIAC 239 (269)
Q Consensus 160 ~sk~~~~~~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i 239 (269)
+||+.+.++++|+++++||+.++... +|. +|+++|+|++..|+++.||++++|++|++++.|++||++++||||++
T Consensus 159 ~sK~~~~~~~~i~~livdAv~~V~~~--~g~--~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll 234 (543)
T 3ruv_A 159 TGKGAEKAKEKLAEIIVEAVSAVVDD--EGK--VDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIAL 234 (543)
T ss_dssp HHTCGGGCCHHHHHHHHHHHHHHCCT--TSC--CCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEE
T ss_pred cccccchhHHHHHHHHHHHHHHhhcc--CCC--cccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcEEEE
Confidence 99999999999999999999999642 243 78889999999999999999999999999999999999999999999
Q ss_pred EeccCCccccccCcEEEECCHHHHHHHHh
Q 024330 240 LDFNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 240 ~~~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
+||||+++++++++++.+++++++++|++
T Consensus 235 ~~~~Le~~k~e~~~~v~Iss~~~l~~~~~ 263 (543)
T 3ruv_A 235 LNCAIEIKETETDAEIRITDPAKLMEFIE 263 (543)
T ss_dssp ESSCBSCCCCSSCCCEEECSTTHHHHHHH
T ss_pred EcccccccccccCceeEeCCHHHHHHHHH
Confidence 99999999999999999999999888764
No 5
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.4e-62 Score=472.46 Aligned_cols=263 Identities=40% Similarity=0.596 Sum_probs=237.4
Q ss_pred ccccccchh---hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHH
Q 024330 4 SSQTLDILG---ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVE 80 (269)
Q Consensus 4 ~~~~~~~~~---~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~ 80 (269)
+..|..+++ +..+|.+++..|+.||+.|++++++||||+||+|||+++.|+++|||||+|||++|+++||+|+|+++
T Consensus 3 ~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e 82 (543)
T 1a6d_B 3 AGQPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVE 82 (543)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHH
T ss_pred CCcchhhcCCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHH
Confidence 346776665 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhc
Q 024330 81 LAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMS 160 (269)
Q Consensus 81 ~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~ 160 (269)
+|++||+++||||||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +.+++..+++.|.++++|+|+
T Consensus 83 ~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-a~~v~~~~~~~l~~va~tsl~ 161 (543)
T 1a6d_B 83 VSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEI-STKIGADEKALLLKMAQTSLN 161 (543)
T ss_dssp HHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH-CEECCTTHHHHHHHHHHHHHT
T ss_pred HHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999998 999875568899999999999
Q ss_pred ccccCCchhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEE
Q 024330 161 SKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACL 240 (269)
Q Consensus 161 sk~~~~~~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~ 240 (269)
||+.++++++|++++++|+.++.+. .+|...+|+++|+|+++.|++++||++++|++|++++.|++||++++||||+++
T Consensus 162 sKi~~~~~~~i~~livdAv~~v~~~-~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~ 240 (543)
T 1a6d_B 162 SKSASVAKDKLAEISYEAVKSVAEL-RDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALL 240 (543)
T ss_dssp TSGGGGGHHHHHHHHHHHHHHHEEE-CSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEE
T ss_pred cccccccHHHHHHHHHHHHHHhccc-ccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEEE
Confidence 9999999999999999999999642 124346888999999999999999999999999999999999999999999999
Q ss_pred eccCCccccccCcEEEECCHHHHHHHHh
Q 024330 241 DFNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 241 ~~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
+|+||+++++.+++|.+++++++++|++
T Consensus 241 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~ 268 (543)
T 1a6d_B 241 DAPLEIKKPEFDTNLRIEDPSMIQKFLA 268 (543)
T ss_dssp SSCBSCCCCSSEEEECCCSTTHHHHHHH
T ss_pred ecccccccccCCceEEeCCHHHHHHHHH
Confidence 9999999999999999999999987764
No 6
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=6.5e-62 Score=467.79 Aligned_cols=258 Identities=41% Similarity=0.639 Sum_probs=239.2
Q ss_pred cccchh---hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHh
Q 024330 7 TLDILG---ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83 (269)
Q Consensus 7 ~~~~~~---~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~ 83 (269)
|..+++ +..+|.+++..|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 7 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 86 (545)
T 1a6d_A 7 PILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSK 86 (545)
T ss_dssp ----------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGG
T ss_pred cccccCCcchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHH
Confidence 766665 46899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhcccc
Q 024330 84 LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKL 163 (269)
Q Consensus 84 ~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~sk~ 163 (269)
+||+++||||||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +++ + .+++.|.++++|+|+||+
T Consensus 87 ~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~-~-~~~~~l~~va~tsl~sKi 163 (545)
T 1a6d_A 87 AQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEI-AEK-S-TDDATLRKIALTALSGKN 163 (545)
T ss_dssp CTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH-CEE-C-CCHHHHHHHHHHHTTTSS
T ss_pred hcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cCC-C-CCHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999998 888 6 578999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEEecc
Q 024330 164 IGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFN 243 (269)
Q Consensus 164 ~~~~~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~ 243 (269)
.++++++|++|++||+.++.+.. +|...+|+++|+|+++.|++++||++++|++|++++.|++||++++||||+++||+
T Consensus 164 ~~~~~~~i~~livdAv~~v~~~~-~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~ 242 (545)
T 1a6d_A 164 TGLSNDFLADLVVKAVNAVAEVR-DGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSA 242 (545)
T ss_dssp CCSTHHHHHHHHHHHHHHHCEES-SSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEECSC
T ss_pred ccccHHHHHHHHHHHHHHHhccc-CCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEecC
Confidence 99999999999999999996431 23345788999999999999999999999999999999999999999999999999
Q ss_pred CCccccccCcEEEECCHHHHHHHHh
Q 024330 244 LQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 244 Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
||+++++.+++|.+++++++++|++
T Consensus 243 Le~~k~e~~~~v~i~~~~~l~~~~~ 267 (545)
T 1a6d_A 243 LEIKKTEIEAKVQISDPSKIQDFLN 267 (545)
T ss_dssp BSCCCCSSCCEEEECSTTHHHHHHH
T ss_pred CCcccccCCceEEeCCHHHHHHHHH
Confidence 9999999999999999999987764
No 7
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=5.8e-62 Score=466.55 Aligned_cols=261 Identities=33% Similarity=0.528 Sum_probs=243.3
Q ss_pred ccccccchhhhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHh
Q 024330 4 SSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83 (269)
Q Consensus 4 ~~~~~~~~~~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~ 83 (269)
.++.....+++.+|.+++..|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+++|++++|+
T Consensus 4 ~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~ 83 (528)
T 3p9d_D 4 KVPSNATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSA 83 (528)
T ss_dssp ---CCCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHH
T ss_pred CcccccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHH
Confidence 33334445688999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhcccc
Q 024330 84 LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKL 163 (269)
Q Consensus 84 ~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~sk~ 163 (269)
+||+++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++ +.+++..+++.|.++|+|+++||+
T Consensus 84 ~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~e~l~~va~tsl~sK~ 162 (528)
T 3p9d_D 84 AQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEM-CHKVSLSDREQLVRAASTSLSSKI 162 (528)
T ss_dssp HHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCSCCHHHHHHHHHHHSCSSS
T ss_pred HhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHh-hCCCCCCCHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999999999999998 999876678999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCC-CCccccCcEEEEEec
Q 024330 164 IGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQG-MPLRVAPAKIACLDF 242 (269)
Q Consensus 164 ~~~~~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~-~~~~~~~~kI~i~~~ 242 (269)
.+.++++|++|++||+.++.+. .+| .+++++|+|++..|++++||++++|++|++++.|++ ||++++||||++++|
T Consensus 163 ~~~~~~~i~~livdAv~~V~~~-~~~--~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~ 239 (528)
T 3p9d_D 163 VSQYSSFLAPLAVDSVLKISDE-NSK--NVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQF 239 (528)
T ss_dssp CSTTHHHHHHHHHHHHHTTCCT-TTT--CCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECC
T ss_pred cchhHHHHHHHHHHHHHHhccc-cCC--ccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEEEec
Confidence 9999999999999999998532 134 467789999999999999999999999999999998 999999999999999
Q ss_pred cCCccccccCcEEEECCHHHHHHHHh
Q 024330 243 NLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 243 ~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
+|+++++++++++.+++++++++|++
T Consensus 240 ~le~~k~~~~~~i~i~~~~~~~~~~~ 265 (528)
T 3p9d_D 240 QISPPKPDTENNIIVNDYRQMDKILK 265 (528)
T ss_dssp CSSCCCCSSEEEEEESSSSHHHHHTH
T ss_pred cccccccccCceEEeCCHHHHHHHHH
Confidence 99999999999999999999987753
No 8
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-61 Score=462.06 Aligned_cols=254 Identities=32% Similarity=0.548 Sum_probs=239.6
Q ss_pred hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHhhccccccCC
Q 024330 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDG 92 (269)
Q Consensus 13 ~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 92 (269)
++.+|.+++..|+.||+.|+++++|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 3 ~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDG 82 (515)
T 3iyg_G 3 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDG 82 (515)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhcccccCCchhHHH
Q 024330 93 TTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFA 172 (269)
Q Consensus 93 ttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~sk~~~~~~~~l~ 172 (269)
|||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +.+++..+++.|.++++|+++||+.+.+.++++
T Consensus 83 TTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~ 161 (515)
T 3iyg_G 83 TTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKI-SIPVDTSNRDTMLNIINSSITTKVISRWSSLAC 161 (515)
T ss_pred hhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-hcccCCCCHHHHHHHHHHHhcCCchhhHHHHHH
Confidence 9999999999999999999999999999999999999999999998 999876678899999999999999999999999
Q ss_pred HHHHHHHHHhhccccCCcccccCcc-eeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEEeccCCcccccc
Q 024330 173 NLVVEAVQAVKMTNQRGEVKYPIKG-INILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL 251 (269)
Q Consensus 173 ~li~~Av~~v~~~~~~g~~~~~~~~-I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~k~~~ 251 (269)
++++||+..+.+. .++...+|+++ |+|++++|++++||++++|++|++++.|++||++++||||++++||||+++++.
T Consensus 162 ~i~vdav~~V~~~-~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~ 240 (515)
T 3iyg_G 162 NIALDAVKTVQFE-ENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 240 (515)
T ss_pred HHHHHHHHhcccc-cCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEccccccccccc
Confidence 9999999988632 22333456654 999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEECCHHHHHHHHh
Q 024330 252 GVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 252 ~~~v~i~~~~~~~~~~~ 268 (269)
++++.+++++||+.+++
T Consensus 241 ~~~v~is~~~~l~~~l~ 257 (515)
T 3iyg_G 241 QTDIEITREEDFTRILQ 257 (515)
T ss_pred CceEEeCCHHHHHHHHH
Confidence 99999999999999876
No 9
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.6e-61 Score=458.53 Aligned_cols=248 Identities=39% Similarity=0.585 Sum_probs=235.0
Q ss_pred hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHhhccccccCC
Q 024330 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDG 92 (269)
Q Consensus 13 ~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 92 (269)
++.+|.+++..|+.||+.|++++++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 5 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GDG 84 (515)
T 3iyg_H 5 DSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDG 84 (515)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhceeCcc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCC----hhhhHHHHHHhhcccccCCch
Q 024330 93 TTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLG----KDSLVNCAKTSMSSKLIGGDS 168 (269)
Q Consensus 93 ttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~----~~~l~~i~~t~l~sk~~~~~~ 168 (269)
|||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +++++..+ ++.|.++|+|+++||+.+.++
T Consensus 85 TTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~ 163 (515)
T 3iyg_H 85 TTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEI-AVTVKKEDKVEQRKLLEKCAMTALSSKLISQQK 163 (515)
T ss_pred hhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-hcccccCChHHHHHHHHHHHHHHhcCCcccccH
Confidence 9999999999999999999999999999999999999999999998 88885334 677899999999999999999
Q ss_pred hHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCC---CccccCcEEEEEeccCC
Q 024330 169 DFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGM---PLRVAPAKIACLDFNLQ 245 (269)
Q Consensus 169 ~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~---~~~~~~~kI~i~~~~Le 245 (269)
++|+++++||+.++. + .+|+++|+|++..|++..||++++|++|++++.||+| |++++||||++++||||
T Consensus 164 ~~i~~livdAv~~V~---~----~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le 236 (515)
T 3iyg_H 164 AFFAKMVVDAVMMLD---D----LLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELE 236 (515)
T ss_pred HHHHHHHHHHHHHhc---c----cCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEccccc
Confidence 999999999999983 1 4778899999999999999999999999999999975 88999999999999999
Q ss_pred ccccccCcEEEECCHHHHHHHHh
Q 024330 246 KTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 246 ~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
+++++.+++|.+++++++++|++
T Consensus 237 ~~k~e~~~~v~is~~~~l~~~~~ 259 (515)
T 3iyg_H 237 LKAEKDNAEIRVHTVEDYQAIVD 259 (515)
T ss_pred ccccccCceEEeCCHHHHHHHHH
Confidence 99999999999999999988753
No 10
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=5.7e-62 Score=468.38 Aligned_cols=259 Identities=37% Similarity=0.541 Sum_probs=234.5
Q ss_pred cccccccchh---hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHH
Q 024330 3 ISSQTLDILG---ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLV 79 (269)
Q Consensus 3 ~~~~~~~~~~---~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~ 79 (269)
|+++|..+++ ++.+|.+++.+|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 5 ~~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~ 84 (550)
T 3p9d_G 5 SQTPTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLV 84 (550)
T ss_dssp -----------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHH
T ss_pred cCCcchhhhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHH
Confidence 4678888886 4679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCC---hhhhHHHHH
Q 024330 80 ELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLG---KDSLVNCAK 156 (269)
Q Consensus 80 ~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~---~~~l~~i~~ 156 (269)
++|++||+++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++ +++++..+ ++.|.++|+
T Consensus 85 e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~~L~~vA~ 163 (550)
T 3p9d_G 85 DISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINEL-AVDITSEKSSGRELLERCAR 163 (550)
T ss_dssp HHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHS-EECCCCC------CHHHHHH
T ss_pred HHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCCCCcchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999997 98886545 778999999
Q ss_pred HhhcccccCCchhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCC---CCCcccc
Q 024330 157 TSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQ---GMPLRVA 233 (269)
Q Consensus 157 t~l~sk~~~~~~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~---~~~~~~~ 233 (269)
|+++||+.+.++++|+++++||+.++.+ . .+|+++|+|+++.|++++||++++|++|++++.|+ .||++++
T Consensus 164 tsl~sK~~~~~~~~i~~livdAv~~V~~--~----~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~e 237 (550)
T 3p9d_G 164 TAMSSKLIHNNADFFVKMCVDAVLSLDR--N----DLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFN 237 (550)
T ss_dssp HHHHHTTTGGGHHHHHHHHHHHHHHCCS--S----SCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCS
T ss_pred HhccCccccccHhHHHHHHHHHHHHhCc--c----ccCchheeEEEecCCCccceeEEeeEEEeccccccccccCccccc
Confidence 9999999999999999999999999842 1 47889999999999999999999999999999998 5799999
Q ss_pred CcEEEEEeccCCccccccCcEEEECCHHHHHHHHh
Q 024330 234 PAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 234 ~~kI~i~~~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
||||+++||+||+++++.+++|.++++++++.|++
T Consensus 238 n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~ 272 (550)
T 3p9d_G 238 NPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVD 272 (550)
T ss_dssp SCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHH
T ss_pred CceEEEeccccccccccccceeeeCCHHHHHHHHH
Confidence 99999999999999999999999999999998764
No 11
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-60 Score=457.18 Aligned_cols=254 Identities=37% Similarity=0.554 Sum_probs=240.0
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHhhcccccc
Q 024330 11 LGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVG 90 (269)
Q Consensus 11 ~~~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~G 90 (269)
.+++.+|.+++..|+.||+.|++++++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 3 ~~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~G 82 (518)
T 3iyg_D 3 YQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAG 82 (518)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhcccccCCchhH
Q 024330 91 DGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDF 170 (269)
Q Consensus 91 DGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~sk~~~~~~~~ 170 (269)
|||||+++|+++||+++.+++++|+||+.|++||++|.+.++++|+++ +.+++..+++.|.++|+|+++||+.+.++++
T Consensus 83 DGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~ 161 (518)
T 3iyg_D 83 DGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDM-SRPVELSDRETLLNSAATSLNSKVVSQYSSL 161 (518)
T ss_pred CCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-eeeCCCCChHHHHHHhHhhhccccchhhHHH
Confidence 999999999999999999999999999999999999999999999998 9998766788999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEEeccCCccccc
Q 024330 171 FANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250 (269)
Q Consensus 171 l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~k~~ 250 (269)
|+++++||+.++.+...+| .+++++|+|++..|++..||++++|++|++++.| +||++++||||++++|+||+++++
T Consensus 162 i~~livdAv~~V~~~~~~~--~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~mp~~i~n~kIlll~~~Le~~k~~ 238 (518)
T 3iyg_D 162 LSPMSVDAVMKVIDPATAT--SVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN-SGITRVEKAKIGLIQFCLSAPKTD 238 (518)
T ss_pred HHHHHHHHHHHhhccccCC--CcccceEEEEEcCCCChhhheEeccEEEeccccc-CCCccccCceEEEEEeeccccccc
Confidence 9999999999996321234 4778899999999999999999999999999999 999999999999999999999999
Q ss_pred cCcEEEECCHHHHHHHHh
Q 024330 251 LGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 251 ~~~~v~i~~~~~~~~~~~ 268 (269)
++++|.+++++++++|++
T Consensus 239 ~~~~i~is~~~~~~~~~~ 256 (518)
T 3iyg_D 239 MDNQIVVSDYVQMDRVLR 256 (518)
T ss_pred cCceEEecCHHHHHHHHH
Confidence 999999999999988764
No 12
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2e-61 Score=465.38 Aligned_cols=256 Identities=66% Similarity=1.037 Sum_probs=239.6
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHhhccccccC
Q 024330 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (269)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GD 91 (269)
+++.+|.+++.+|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 17 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GD 96 (559)
T 3p9d_A 17 GEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGD 96 (559)
T ss_dssp CEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHHHHTSS
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhh-hhccccccCChhhhHHHHHHhhcccccCCchhH
Q 024330 92 GTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE-KLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDF 170 (269)
Q Consensus 92 Gttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~-~~s~~v~~~~~~~l~~i~~t~l~sk~~~~~~~~ 170 (269)
||||++||+++||+++.+++++|+||+.|++||++|++.++++|++ + +++++..+++.|.++|+|+++||+.++++++
T Consensus 97 GTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~-s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~ 175 (559)
T 3p9d_A 97 GTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVL-STSVDTLGKETLINIAKTSMSSKIIGADSDF 175 (559)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHT-GGGSCC--CTTHHHHHHHTTSSSGGGTTHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCCCHHHHHHHHHHHhccCcccchhHH
Confidence 9999999999999999999999999999999999999999999999 7 9998765688999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCcccc--CcEEEEEeccCCccc
Q 024330 171 FANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVA--PAKIACLDFNLQKTK 248 (269)
Q Consensus 171 l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~--~~kI~i~~~~Le~~k 248 (269)
|++|++||+.++.+.+.++.-.+++++|+|+++.|++++||++++|++|++++.|++||++++ ||||++++|+|++++
T Consensus 176 i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~~Le~~k 255 (559)
T 3p9d_A 176 FSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKAR 255 (559)
T ss_dssp HHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEETTCCSCCC
T ss_pred HHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceeeccCCceEEEEeccccccc
Confidence 999999999999632112222478889999999999999999999999999999999999999 999999999999999
Q ss_pred cccCcEEEECCHHHHHHHHh
Q 024330 249 MQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 249 ~~~~~~v~i~~~~~~~~~~~ 268 (269)
++++++|.+++++++++|++
T Consensus 256 ~e~~~~v~is~~~~l~~i~~ 275 (559)
T 3p9d_A 256 MAMGVQINIDDPEQLEQIRK 275 (559)
T ss_dssp CCTTCCEEECSSSCHHHHHH
T ss_pred cccCceEEeCCHHHHHHHHH
Confidence 99999999999999887753
No 13
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-60 Score=455.88 Aligned_cols=251 Identities=28% Similarity=0.458 Sum_probs=238.9
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHhhccccccC
Q 024330 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (269)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GD 91 (269)
++..+|.+++.+|+.||+.|++++++||||+||+|||+++.|+++|||||+|||++|+++||+++|+++++++||+++||
T Consensus 3 ~~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GD 82 (517)
T 3iyg_Z 3 AEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGD 82 (517)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhcccccCCchhHH
Q 024330 92 GTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFF 171 (269)
Q Consensus 92 Gttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~sk~~~~~~~~l 171 (269)
||||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +.+++. +++.|.++++|+++||+.+.+.++|
T Consensus 83 GTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~-~~~~L~~va~tsl~sKi~~~~~d~l 160 (517)
T 3iyg_Z 83 GTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQV-KVSKEM-DRETLIDVARTSLRTKVHAELADVL 160 (517)
T ss_pred CceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhh-CcCCCC-CHHHHHHHHHHHhccccchhHHHHH
Confidence 99999999999999999999999999999999999999999999998 888764 6789999999999999999999999
Q ss_pred HHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEEeccCCcccccc
Q 024330 172 ANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQL 251 (269)
Q Consensus 172 ~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~k~~~ 251 (269)
+++++||+..+... + ..+|+++|+|+++.|++..||++++|++|++++.|++||++++||||++++||||++|++.
T Consensus 161 a~l~vdaV~~V~~~---~-~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~ 236 (517)
T 3iyg_Z 161 TEAVVDSILAIKKQ---D-EPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEV 236 (517)
T ss_pred HHHHHHHhheeccC---C-CcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccccCCeEEEeccccccccccc
Confidence 99999999988532 1 2578899999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEECCHHHHHHHHh
Q 024330 252 GVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 252 ~~~v~i~~~~~~~~~~~ 268 (269)
++++.+++++++++|++
T Consensus 237 ~~~~~i~~~~~l~~~~~ 253 (517)
T 3iyg_Z 237 NSGFFYKSAEEREKLVK 253 (517)
T ss_pred ceeEEeCCHHHHHHHHH
Confidence 99999999999999875
No 14
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=4.5e-60 Score=452.32 Aligned_cols=247 Identities=38% Similarity=0.586 Sum_probs=235.0
Q ss_pred hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCC--CCeEEecCHHHHhhhccccCchhHHHHHHHhhcccccc
Q 024330 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDI--GDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVG 90 (269)
Q Consensus 13 ~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~--g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~G 90 (269)
++.+|.+++.+|+.||+.|++++++||||+||+|||+++. |+++|||||+|||++|+++||.|+|++++|++||+++|
T Consensus 4 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e~G 83 (513)
T 3iyg_B 4 DEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVG 83 (513)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhhhC
Confidence 5789999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhcccccc---CChhhhHHHHHHhhcccccCCc
Q 024330 91 DGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEK---LGKDSLVNCAKTSMSSKLIGGD 167 (269)
Q Consensus 91 DGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~---~~~~~l~~i~~t~l~sk~~~~~ 167 (269)
|||||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +++++. .+++.|.++|+|+++||+.+++
T Consensus 84 DGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~~l~~va~tslssK~~~~~ 162 (513)
T 3iyg_B 84 DGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNS-AVDHGSDEVKFRQDLMNIAGTTLSSKLLTHH 162 (513)
T ss_pred CChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-CcCcccccccCHHHHHHHHHhhhcccccccc
Confidence 999999999999999999999999999999999999999999999998 888863 2578999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEEeccCCcc
Q 024330 168 SDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247 (269)
Q Consensus 168 ~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~ 247 (269)
+++|+++++||+.++.+ .+|+++|+|+++.|+++.||++++|++|++++.++ ||++++||||+++|||||++
T Consensus 163 ~~~i~~livdAv~~V~~-------~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~-m~~~~en~kIll~~~~Le~~ 234 (513)
T 3iyg_B 163 KDHFTKLAVEAVLRLKG-------SGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN-QPKRIENAKILIANTGMDTD 234 (513)
T ss_pred hHHHHHHHHHHHHHhcc-------cCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC-CceeecCceEEEEcCCcccc
Confidence 99999999999999842 26788999999999999999999999999999988 99999999999999999999
Q ss_pred ccc-cCcEEEECCHHHHHHHHh
Q 024330 248 KMQ-LGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 248 k~~-~~~~v~i~~~~~~~~~~~ 268 (269)
+++ ++++|.++++++++.|++
T Consensus 235 k~e~~~~~v~iss~~~l~~~~~ 256 (513)
T 3iyg_B 235 KIKIFGSRVRVDSTAKVAEIEH 256 (513)
T ss_pred cccccCCceEEcCHHHHHHHHH
Confidence 999 999999999999988753
No 15
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.1e-61 Score=466.20 Aligned_cols=263 Identities=29% Similarity=0.459 Sum_probs=240.4
Q ss_pred cccccchh---hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHH
Q 024330 5 SQTLDILG---ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVEL 81 (269)
Q Consensus 5 ~~~~~~~~---~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~ 81 (269)
++|..+++ ++.+|.+++..|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++
T Consensus 2 ~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e~ 81 (590)
T 3p9d_C 2 QAPVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLEL 81 (590)
T ss_dssp ----CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHHH
T ss_pred CCCeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHHH
Confidence 56888876 568999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccCCchhHHHHHHHHHHHHHHH-HHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhc
Q 024330 82 AELQDREVGDGTTSVVIVAAELLKRANDL-VRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMS 160 (269)
Q Consensus 82 ~~~~~~~~GDGttt~vlL~~~Ll~~~~~l-i~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~ 160 (269)
|++||+++||||||+++|+++||+++.++ +++|+||+.|++||++|++.++++|+++ +++++..+++.|.++|+|+|+
T Consensus 82 a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~e~L~~vA~tsls 160 (590)
T 3p9d_C 82 SRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQV-SKPVDVENDAAMKKLIQASIG 160 (590)
T ss_dssp TTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHH-CCTTTTCCTHHHHHHHTTTST
T ss_pred HHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHH-hhccccCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999 9999999999999999999999999998 999876667899999999999
Q ss_pred ccccCCchhHHHHHHHHHHHHhhccccCCc-----ccccCc-ceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccC
Q 024330 161 SKLIGGDSDFFANLVVEAVQAVKMTNQRGE-----VKYPIK-GINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAP 234 (269)
Q Consensus 161 sk~~~~~~~~l~~li~~Av~~v~~~~~~g~-----~~~~~~-~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~ 234 (269)
||+.++++++|++|++||+.++.+.+..+. ..+|++ +|+|+++.|+++.||++++|++|++++.++.||++++|
T Consensus 161 SK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~~en 240 (590)
T 3p9d_C 161 TKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIEN 240 (590)
T ss_dssp TSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCSCEES
T ss_pred cccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcceeee
Confidence 999999999999999999999864322111 134443 79999999999999999999999999999999999999
Q ss_pred cEEEEEeccCCccccccCcEEEECCHHHHHHHHh
Q 024330 235 AKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 235 ~kI~i~~~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
|||++++||||++|++.+++|.++++++|+.|++
T Consensus 241 ~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~ 274 (590)
T 3p9d_C 241 PRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQ 274 (590)
T ss_dssp CCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHH
T ss_pred eEEEEEcccccccccccCceEEeCCHHHHHHHHH
Confidence 9999999999999999999999999999998874
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-59 Score=449.47 Aligned_cols=252 Identities=36% Similarity=0.511 Sum_probs=237.6
Q ss_pred hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHhhccccccCC
Q 024330 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDG 92 (269)
Q Consensus 13 ~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDG 92 (269)
++.+|.+++..|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++|||
T Consensus 4 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GDG 83 (515)
T 3iyg_E 4 SRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDG 83 (515)
T ss_pred hhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCc
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhcccccc--CChhhhHHHHHHhhcccccCCchhH
Q 024330 93 TTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEK--LGKDSLVNCAKTSMSSKLIGGDSDF 170 (269)
Q Consensus 93 ttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~--~~~~~l~~i~~t~l~sk~~~~~~~~ 170 (269)
|||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +.+++. .+++.|.++|+|+++||+.+.+.+.
T Consensus 84 TTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~ 162 (515)
T 3iyg_E 84 TTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKI-SDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQ 162 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-ceecCCCccCHHHHHHHHHHHhcccchhHHHHH
Confidence 9999999999999999999999999999999999999999999998 888753 3468899999999999999989999
Q ss_pred HHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEEeccCCccccc
Q 024330 171 FANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQ 250 (269)
Q Consensus 171 l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~k~~ 250 (269)
|+++++||+..+.... + ..+++++|+|+++.|++++||++++|++|++++.|++||++++||||++++|||++++++
T Consensus 163 l~~l~~dav~~V~~~~--~-~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~ 239 (515)
T 3iyg_E 163 MAEIAVNAVLTVADMQ--R-RDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPK 239 (515)
T ss_pred HHHHHHHHHHhhcccc--c-CCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcCcccccccc
Confidence 9999999999985421 1 147789999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEECCHHHHHHHHh
Q 024330 251 LGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 251 ~~~~v~i~~~~~~~~~~~ 268 (269)
.++++.+++++|++.|.+
T Consensus 240 ~~~~~~is~~~~l~~~~~ 257 (515)
T 3iyg_E 240 TKHKLDVTSVEDFKALQK 257 (515)
T ss_pred ccceeeeCCHHHHHHHHH
Confidence 999999999999987654
No 17
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=4.2e-60 Score=456.42 Aligned_cols=261 Identities=35% Similarity=0.522 Sum_probs=236.8
Q ss_pred ccccccchhh-----hcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHH
Q 024330 4 SSQTLDILGE-----RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVL 78 (269)
Q Consensus 4 ~~~~~~~~~~-----~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll 78 (269)
+.+|..++.+ +.+|.+++..|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|+
T Consensus 25 ~~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll 104 (562)
T 3p9d_E 25 MGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLL 104 (562)
T ss_dssp -----CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHH
T ss_pred cCCCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHH
Confidence 4457666653 36899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCC----hhhhHHH
Q 024330 79 VELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLG----KDSLVNC 154 (269)
Q Consensus 79 ~~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~----~~~l~~i 154 (269)
+++|++||+++||||||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +.+++..+ ++.|.++
T Consensus 105 ~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~e~L~~v 183 (562)
T 3p9d_E 105 VQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEET-CDDISASNDELFRDFLLRA 183 (562)
T ss_dssp HHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTT-TSSSSBCCCSSCHHHHHHH
T ss_pred HHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-ccCcCCCcchhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998 88876422 2689999
Q ss_pred HHHhhcccccCCchhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccc--
Q 024330 155 AKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRV-- 232 (269)
Q Consensus 155 ~~t~l~sk~~~~~~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~-- 232 (269)
|+|+++||+.+.+.++|+++++||+..+..... ..+++++|+|+++.|++++||++++|++|++++.|++||+++
T Consensus 184 A~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~---~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~ 260 (562)
T 3p9d_E 184 AKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDR---KDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLP 260 (562)
T ss_dssp HHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTC---SCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSCCC----
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHheeeccccc---CCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCcCccccc
Confidence 999999999999999999999999998853211 257889999999999999999999999999999999999999
Q ss_pred ----cCcEEEEEeccCCccccccCcEEEECCHHHHHHHHh
Q 024330 233 ----APAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 233 ----~~~kI~i~~~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
+++||++++|||++++++.++++.++++++|++|.+
T Consensus 261 ~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~ 300 (562)
T 3p9d_E 261 KEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQT 300 (562)
T ss_dssp -TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHH
T ss_pred ccccccceEEEecccccccccccCceEEECCHHHHHHHHH
Confidence 999999999999999999999999999999887754
No 18
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=2.4e-60 Score=457.26 Aligned_cols=253 Identities=25% Similarity=0.451 Sum_probs=239.2
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHhhccccccC
Q 024330 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (269)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GD 91 (269)
.++.+|.+++..|+.||+.|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+++|++++|++||+++||
T Consensus 10 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GD 89 (546)
T 3p9d_F 10 AESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQDEITGD 89 (546)
T ss_dssp EEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHHHHHCSS
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhcccccc--CChhhhHHHHHHhhcccccCCchh
Q 024330 92 GTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEK--LGKDSLVNCAKTSMSSKLIGGDSD 169 (269)
Q Consensus 92 Gttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~--~~~~~l~~i~~t~l~sk~~~~~~~ 169 (269)
||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++ +++++. .+++.|.++++|+++||+.+.+.+
T Consensus 90 GTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d 168 (546)
T 3p9d_F 90 GTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEF-KISKTNLSNDREFLLQVARSSLLTKVDADLTE 168 (546)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHH-CCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCS
T ss_pred CcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHh-hccccccccCHHHHHHHHHHHhCCCcchhHHH
Confidence 99999999999999999999999999999999999999999999998 888753 467899999999999999988999
Q ss_pred HHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEEeccCCcccc
Q 024330 170 FFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKM 249 (269)
Q Consensus 170 ~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~k~ 249 (269)
.|+++++||+..+.+.. + ..+++++|+|+++.|++..||++++|++|++++.|++||++++||||++++||||++++
T Consensus 169 ~la~l~vdaV~~V~~~~--~-~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le~~k~ 245 (546)
T 3p9d_F 169 VLTPIVTDAVLSVYDAQ--A-DNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKT 245 (546)
T ss_dssp SHHHHHHHHHHHTHHHH--H-TTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSSSCCC
T ss_pred HHHHHHHHhheEeecCC--C-CcccchheEEEEecCCCccccEEEeeEEEecccccccCcceecCceEEEecCccccccc
Confidence 99999999999986321 1 14788999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcEEEECCHHHHHHHHh
Q 024330 250 QLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 250 ~~~~~v~i~~~~~~~~~~~ 268 (269)
+.+++|.+++++++++|++
T Consensus 246 e~~~~~~i~~~~~~~~~~~ 264 (546)
T 3p9d_F 246 EVNSGFFYSSADQRDKLAA 264 (546)
T ss_dssp SSCBCCCCCSSSCHHHHHH
T ss_pred ccCceEEEcCHHHHHHHHH
Confidence 9999999999999988864
No 19
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=5.9e-59 Score=448.92 Aligned_cols=258 Identities=29% Similarity=0.436 Sum_probs=233.7
Q ss_pred cccchh---hhccc-HHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHH
Q 024330 7 TLDILG---ERQAG-QDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELA 82 (269)
Q Consensus 7 ~~~~~~---~~~~g-~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~ 82 (269)
+..+++ ++.+| .+++..|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|
T Consensus 10 ~~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a 89 (568)
T 3p9d_H 10 NAGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMAT 89 (568)
T ss_dssp CCSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHHH
T ss_pred hhhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHH
Confidence 344554 35677 57999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhcccc--ccCChhhhHHHHHHhhc
Q 024330 83 ELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKV--EKLGKDSLVNCAKTSMS 160 (269)
Q Consensus 83 ~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v--~~~~~~~l~~i~~t~l~ 160 (269)
++||+++||||||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +.++ +..+++.|.++++|+++
T Consensus 90 ~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~-a~~v~~~~~~~~~l~~va~tsl~ 168 (568)
T 3p9d_H 90 EQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEM-VVGEITDKNDKNELLKMIKPVIS 168 (568)
T ss_dssp HHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH-CCSCCCCCCTTHHHHHHHHHHHT
T ss_pred HhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-ccccCCCCCCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999998 7765 32467899999999999
Q ss_pred ccccCCchhHHHHHHHHHHHHhhcccc--CCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCcccc---Cc
Q 024330 161 SKLIGGDSDFFANLVVEAVQAVKMTNQ--RGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVA---PA 235 (269)
Q Consensus 161 sk~~~~~~~~l~~li~~Av~~v~~~~~--~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~---~~ 235 (269)
||+.+++ ++|++|++||+.++.+... .+...+|+++|+|+++.|++++||++++|++|++++. +||++++ ||
T Consensus 169 sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~--~m~~~i~~~~n~ 245 (568)
T 3p9d_H 169 SKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPE--GHVKSLSEDKKH 245 (568)
T ss_dssp TTSTTCH-HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBS--SGGGSCCCCSSC
T ss_pred ccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeeccc--CCcEEEecCCcc
Confidence 9999887 9999999999999854200 1222578889999999999999999999999999975 7999999 99
Q ss_pred EEEEEeccCCccccccCcEEEECCHHHHHHHHh
Q 024330 236 KIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 236 kI~i~~~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
||++++|+||+++++++++|.++++++++.|++
T Consensus 246 kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~ 278 (568)
T 3p9d_H 246 KVAVFTCPLDIANTETKGTVLLHNAQEMLDFSK 278 (568)
T ss_dssp EEEEECSCSSSCCCSSSCEEECCSHHHHHHHHH
T ss_pred eEEEEccCccccccccCceEEeCCHHHHHHHHH
Confidence 999999999999999999999999999998764
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.1e-58 Score=438.22 Aligned_cols=247 Identities=29% Similarity=0.465 Sum_probs=230.2
Q ss_pred hhccc-HHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHhhccccccC
Q 024330 13 ERQAG-QDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (269)
Q Consensus 13 ~~~~g-~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GD 91 (269)
++.+| .+++.+|+.||+.|++++++||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 4 ~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GD 83 (512)
T 3iyg_Q 4 KHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGD 83 (512)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 45788 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhcc--ccccCChhhhHHHHHHhhcccccCCchh
Q 024330 92 GTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAV--KVEKLGKDSLVNCAKTSMSSKLIGGDSD 169 (269)
Q Consensus 92 Gttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~--~v~~~~~~~l~~i~~t~l~sk~~~~~~~ 169 (269)
||||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +. +.+..+++.|.++++|+++||+.+ +++
T Consensus 84 GTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~-~~~~~~~~~~~~~l~~va~tsl~sK~~~-~~~ 161 (512)
T 3iyg_Q 84 GTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDL-VCCSAKNLRDVDEVSSLLHTSVMSKQYG-NEV 161 (512)
T ss_pred ChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-hcccCCCCCCHHHHHHHHHHHhCCCCcc-chH
Confidence 99999999999999999999999999999999999999999999986 43 333346889999999999999876 689
Q ss_pred HHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEEeccCCcccc
Q 024330 170 FFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKM 249 (269)
Q Consensus 170 ~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~k~ 249 (269)
+|+++++||+.++.+. ++ .+++++|+|.|..|+++.||++++|++|++++.+ ||++++|+||++++|||+++++
T Consensus 162 ~i~~livdAv~~V~~~--~~--~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~ 235 (512)
T 3iyg_Q 162 FLAKLIAQACVSIFPD--SG--HFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMIT 235 (512)
T ss_pred HHHHHHHHHHHHHhcc--CC--cccHhHeeEeeccCCCcccceEEeeEEEecCcCC--CCcccccCceEEEecccccccc
Confidence 9999999999999532 23 4778899999999999999999999999999876 9999999999999999999999
Q ss_pred ccCcEEEECCHHHHHHHH
Q 024330 250 QLGVQVLVTDPRELEKIR 267 (269)
Q Consensus 250 ~~~~~v~i~~~~~~~~~~ 267 (269)
+.++++.+++++|++.|.
T Consensus 236 e~k~~v~Is~~~~l~~~~ 253 (512)
T 3iyg_Q 236 ETKGTVLIKSAEELMNFS 253 (512)
T ss_pred cccceEEeCCHHHHHHHH
Confidence 999999999999999884
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.3e-58 Score=443.61 Aligned_cols=247 Identities=37% Similarity=0.593 Sum_probs=230.8
Q ss_pred hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeec-CCCCeEEecCHHHHhhhccccCchhHHHHHHHhhccccccC
Q 024330 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVD-DIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGD 91 (269)
Q Consensus 13 ~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~-~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GD 91 (269)
+..+|.+++..|+.||+.|+++|++||||+||+|||++ +.|+++|||||+|||++|+++||.|+|++++|++||+++||
T Consensus 11 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~~qd~~~GD 90 (527)
T 3p9d_B 11 TEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGD 90 (527)
T ss_dssp EEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHHHHHHHTCS
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHHHhHhhhCC
Confidence 56899999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHc-CCChHhHHHHHHHHHHHHHHHHhhhhccccccCC---hhhhHHHHHHhhcccccCCc
Q 024330 92 GTTSVVIVAAELLKRANDLVRN-KIHPTSIISGYRLAMREACKYVNEKLAVKVEKLG---KDSLVNCAKTSMSSKLIGGD 167 (269)
Q Consensus 92 Gttt~vlL~~~Ll~~~~~li~~-gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~---~~~l~~i~~t~l~sk~~~~~ 167 (269)
||||++||+++||+++.+++++ |+||+.|++||++|.+.++++|+++ +++++..+ ++.|.++|+|+++||+.+.+
T Consensus 91 GTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~ 169 (527)
T 3p9d_B 91 GTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKA-AVDNSHDKTMFREDLIHIAKTTLSSKILSQD 169 (527)
T ss_dssp CTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHT-CBCCCCCHHHHHHHHHHHHHHHHTTSGGGGG
T ss_pred cHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh-CccCCCcchhhHHHHHHHHHhccccCcccch
Confidence 9999999999999999999999 9999999999999999999999998 88876422 68899999999999999999
Q ss_pred hhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCCCCccccCcEEEEEeccCCcc
Q 024330 168 SDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKT 247 (269)
Q Consensus 168 ~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~ 247 (269)
+++|++|++||+.++. +++ ++++|+|+++.|++++||++++|++|++++.|++ |++++||||++++|+||++
T Consensus 170 ~~~i~~li~dAv~~V~---~~~----~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~-p~~~~n~kIlll~~~le~~ 241 (527)
T 3p9d_B 170 KDHFAELATNAILRLK---GST----NLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ-PKRIENAKILIANTTLDTD 241 (527)
T ss_dssp HHHHHHHHHHHHHTTC---TTC----CTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC-CSCCSSCEEEEECSCSSCC
T ss_pred HHHHHHHHHHHHHHhc---ccC----CcceEEEEEcCCCCccccEEEEeEEEecccCCCC-CeeeecceEEEeccccccc
Confidence 9999999999999984 333 4678999999999999999999999999999997 9999999999999999999
Q ss_pred ccc-cCcEEEECCHHHHHHHHh
Q 024330 248 KMQ-LGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 248 k~~-~~~~v~i~~~~~~~~~~~ 268 (269)
+++ +++++.+++++++++|.+
T Consensus 242 k~~~~~~~v~i~~~~~l~~~~~ 263 (527)
T 3p9d_B 242 KVKIFGTKFKVDSTAKLAQLEK 263 (527)
T ss_dssp CCSSCCCBCCCCHHHHHHHHHH
T ss_pred cccccCceEEEcCHHHHHHHHH
Confidence 999 699999999999977643
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.6e-51 Score=389.73 Aligned_cols=220 Identities=33% Similarity=0.527 Sum_probs=146.4
Q ss_pred eeecCCCCeEEecCHHHHhhhccccCchhHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHH
Q 024330 47 MLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRL 126 (269)
Q Consensus 47 ~i~~~~g~~~iTnDg~tIl~~l~~~hP~~~ll~~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~ 126 (269)
||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||||||+++|+++||+++.+++++|+||+.|++||++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhccccccCChhhhHHHHHHhhcccccCCchhHHHHHHHHHHHHhhccccCCccccc-CcceeEEecCC
Q 024330 127 AMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNQRGEVKYP-IKGINILKAHG 205 (269)
Q Consensus 127 a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~sk~~~~~~~~l~~li~~Av~~v~~~~~~g~~~~~-~~~I~i~k~~G 205 (269)
|++.++++|+++ +++++..+++.|.++++|+|+||+.++++++|++++++|+.++.+. .+|...+| +++|+|+++.|
T Consensus 81 A~~~a~~~L~~~-s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~-~~g~~~~di~~~I~V~k~~G 158 (500)
T 3aq1_B 81 AAEKCREILETI-TIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEE-EEDGLKVNVLENIKIEKRAG 158 (500)
T ss_dssp HHHHHHHHHHHH-CEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEEC-CSSSCEECHHHHEEEEEEES
T ss_pred HHHHHHHHHHHh-cCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhccc-ccCCccccccccEEEEEecC
Confidence 999999999998 9998766789999999999999999999999999999999998532 12545677 78999999999
Q ss_pred CCcceeEEEEeEEEccccCCCCCCccccCcEEEEEeccCCccccccCcEEEECCHHHHHHHHh
Q 024330 206 KSARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 206 ~~~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
++++||++++|++|++++.|++||++++||||+++||+||+++++.+++|.+++++++++|++
T Consensus 159 ~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~ 221 (500)
T 3aq1_B 159 GSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLD 221 (500)
T ss_dssp SCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC----------------------
T ss_pred CCccceEEEeeeEEeecCCCCCCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999977764
No 23
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=4e-49 Score=378.00 Aligned_cols=212 Identities=21% Similarity=0.353 Sum_probs=195.7
Q ss_pred hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCc----hhHHHHHHHhhcccc
Q 024330 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP----AAKVLVELAELQDRE 88 (269)
Q Consensus 13 ~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~ 88 (269)
+..+|.++|.+|+.||+.|+++|++||||+||+|||+++.|+++|||||+||+++|+++|| .|+|+++++++|+++
T Consensus 4 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (547)
T 1kp8_A 4 DVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDA 83 (547)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccc
Confidence 4578999999999999999999999999999999999999999999999999999999999 899999999999999
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhcccccCCch
Q 024330 89 VGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDS 168 (269)
Q Consensus 89 ~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~sk~~~~~~ 168 (269)
+||||||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +++++ +++.|.++++++++ ++
T Consensus 84 ~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~--~~e~l~~vA~iS~~------~~ 154 (547)
T 1kp8_A 84 AGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKAL-SVPCS--DSKAIAQVGTISAN------SD 154 (547)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH-CBCCC--SHHHHHHHHHHHTT------SC
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-CcCCC--CHHHHHHHHHHhcc------ch
Confidence 99999999999999999999999999999999999999999999999998 99986 58899999998863 57
Q ss_pred hHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCccee-EEEEeEEEccccCCCCC-------CccccCcEEEEE
Q 024330 169 DFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDS-YFLNGYALNAFRAAQGM-------PLRVAPAKIACL 240 (269)
Q Consensus 169 ~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS-~lv~Giv~~~~~~~~~~-------~~~~~~~kI~i~ 240 (269)
++|+++++||+.++. ++|. |+|+ .|++++|| ++++|++|+++|.|++| +++++||||+++
T Consensus 155 ~~i~~liadAv~~V~---~dg~-------I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~ 222 (547)
T 1kp8_A 155 ETVGKLIAEAMDKVG---KEGV-------ITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLA 222 (547)
T ss_dssp HHHHHHHHHHHHHHC---TTSE-------EEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECE
T ss_pred hHHHHHHHHHHHHhC---cCCc-------EEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEE
Confidence 999999999999984 3332 5565 88999998 99999999999999875 456999999999
Q ss_pred eccCC
Q 024330 241 DFNLQ 245 (269)
Q Consensus 241 ~~~Le 245 (269)
||+++
T Consensus 223 d~~Is 227 (547)
T 1kp8_A 223 DKKIS 227 (547)
T ss_dssp ESEEC
T ss_pred cCcCC
Confidence 99754
No 24
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=9e-49 Score=375.73 Aligned_cols=221 Identities=27% Similarity=0.358 Sum_probs=200.0
Q ss_pred hhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCc----hhHHHHHHHhhcccc
Q 024330 13 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP----AAKVLVELAELQDRE 88 (269)
Q Consensus 13 ~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~~ 88 (269)
+..+|.++|.+|+.||+.|+++|++||||+||+|||+++.|+++|||||+||+++|+++|| .|+|+++++++||++
T Consensus 4 ~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (543)
T 1we3_A 4 ILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDV 83 (543)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhhee
Confidence 4578999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhcccccCCch
Q 024330 89 VGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDS 168 (269)
Q Consensus 89 ~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~sk~~~~~~ 168 (269)
+||||||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +++++ +++.|.++++++++ +
T Consensus 84 ~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~--~~~~l~~vA~iS~~-------~ 153 (543)
T 1we3_A 84 AGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKAL-AIPVE--DRKAIEEVATISAN-------D 153 (543)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHT-CBCCC--SHHHHHHHHHHHHT-------C
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCC--CHHHHHHhhhhhcC-------C
Confidence 99999999999999999999999999999999999999999999999998 99886 58899999998752 6
Q ss_pred hHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCccee-EEEEeEEEccccCCCC-------CCccccCcEEEEE
Q 024330 169 DFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDS-YFLNGYALNAFRAAQG-------MPLRVAPAKIACL 240 (269)
Q Consensus 169 ~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS-~lv~Giv~~~~~~~~~-------~~~~~~~~kI~i~ 240 (269)
++++++++||+.++. ++| .|+|+ .|++++|| ++++|++|+++|.|++ |+++++||||+++
T Consensus 154 ~~i~~li~dAv~~V~---~~g-------~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~ 221 (543)
T 1we3_A 154 PEVGKLIADAMEKVG---KEG-------IITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIV 221 (543)
T ss_dssp HHHHHHHHHHHHTTC---TTS-------EEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhC---cCC-------cEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEE
Confidence 899999999999884 333 25565 78889988 9999999999999986 4556999999999
Q ss_pred eccCCccccccCcEEEECCHHHHHHHHh
Q 024330 241 DFNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 241 ~~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
||++ ++++++..+.+
T Consensus 222 d~~I-------------s~~~~l~~~le 236 (543)
T 1we3_A 222 EKKV-------------SNVRELLPILE 236 (543)
T ss_dssp SSCB-------------CCHHHHHHHHH
T ss_pred CCCc-------------CCHHHHHHHHH
Confidence 9964 46666665543
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3e-49 Score=378.90 Aligned_cols=214 Identities=22% Similarity=0.337 Sum_probs=196.5
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCc----hhHHHHHHHhhccc
Q 024330 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP----AAKVLVELAELQDR 87 (269)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP----~~~ll~~~~~~~~~ 87 (269)
++..+|.++|.+|+.||+.|+++|++||||+||+|||+++.|+++|||||+||+++|+++|| .|+|+++++++||+
T Consensus 4 k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~ 83 (545)
T 1iok_A 4 KEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTND 83 (545)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhcc
Confidence 35678999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhcccccCCc
Q 024330 88 EVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGD 167 (269)
Q Consensus 88 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~sk~~~~~ 167 (269)
++||||||+++|+++||+++.+++++|+||+.|++||++|++.++++|+++ +++++ +++.|.++++++++ +
T Consensus 84 e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~-s~~v~--~~e~l~~va~iS~~------~ 154 (545)
T 1iok_A 84 EAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSA-ARPVN--DSSEVAQVGTISAN------G 154 (545)
T ss_dssp GCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CBCCC--STTTTTHHHHHTTT------T
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCC--CHHHHHHHHHhhcC------C
Confidence 999999999999999999999999999999999999999999999999998 99886 57889999998863 5
Q ss_pred hhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCccee-EEEEeEEEccccCCCC-------CCccccCcEEEE
Q 024330 168 SDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDS-YFLNGYALNAFRAAQG-------MPLRVAPAKIAC 239 (269)
Q Consensus 168 ~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS-~lv~Giv~~~~~~~~~-------~~~~~~~~kI~i 239 (269)
+++|++++++|+.++. ++|. |+|+ .|++++|| ++++|++|++++.|++ |+++++||||++
T Consensus 155 ~~~i~~li~dAv~~V~---~~g~-------I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill 222 (545)
T 1iok_A 155 ESFIGQQIAEAMQRVG---NEGV-------ITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILL 222 (545)
T ss_dssp CHHHHHHHHHHHHHHC---TTSC-------CCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEE
T ss_pred chhHHHHHHHHHHHhc---cCCe-------EEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEE
Confidence 7999999999999984 3332 4454 78889998 9999999999999986 455699999999
Q ss_pred EeccCCc
Q 024330 240 LDFNLQK 246 (269)
Q Consensus 240 ~~~~Le~ 246 (269)
+||+++.
T Consensus 223 ~d~~I~~ 229 (545)
T 1iok_A 223 HEKKLSS 229 (545)
T ss_dssp CSSCBCC
T ss_pred EcCCcCC
Confidence 9998764
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=3.6e-49 Score=377.63 Aligned_cols=213 Identities=24% Similarity=0.303 Sum_probs=131.5
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhhhhcCCCCCceeeecCCCCeEEecCHHHHhhhccccCch----hHHHHHHHhhccc
Q 024330 12 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPA----AKVLVELAELQDR 87 (269)
Q Consensus 12 ~~~~~g~~~~~~n~~~~~~l~~~v~~slGP~G~~k~i~~~~g~~~iTnDg~tIl~~l~~~hP~----~~ll~~~~~~~~~ 87 (269)
++..+|.++|..|+.||+.|+++|++||||+||+|||+++.|+++|||||+||+++|+++||+ |+|+++++++||+
T Consensus 3 k~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~ 82 (546)
T 3rtk_A 3 KTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDD 82 (546)
T ss_dssp ----------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC-
T ss_pred ceeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhh
Confidence 356789999999999999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHHHHHHHhhhhccccccCChhhhHHHHHHhhcccccCCc
Q 024330 88 EVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGD 167 (269)
Q Consensus 88 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~l~~l~~~~s~~v~~~~~~~l~~i~~t~l~sk~~~~~ 167 (269)
++||||||+++|+++||+++.+++++|+||+.|++||++|.+.++++|+++ +.+++ +++.|.++|+++++
T Consensus 83 e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~-s~~v~--~~e~L~~vA~iS~~------- 152 (546)
T 3rtk_A 83 VAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKG-AKEVE--TKEQIAATAAISAG------- 152 (546)
T ss_dssp ------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHT-CBCCC--SHHHHHHHHHHHHT-------
T ss_pred hhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHh-cccCC--ChHHHHhHeEEeCC-------
Confidence 999999999999999999999999999999999999999999999999998 99987 57899999998763
Q ss_pred hhHHHHHHHHHHHHhhccccCCcccccCcceeEEecCCCCcceeEEEEeEEEccccCCCC-------CCccccCcEEEEE
Q 024330 168 SDFFANLVVEAVQAVKMTNQRGEVKYPIKGINILKAHGKSARDSYFLNGYALNAFRAAQG-------MPLRVAPAKIACL 240 (269)
Q Consensus 168 ~~~l~~li~~Av~~v~~~~~~g~~~~~~~~I~i~k~~G~~~~dS~lv~Giv~~~~~~~~~-------~~~~~~~~kI~i~ 240 (269)
++++++++++|+.++. ++| .|+|++..| ...||++++|++|++++.||+ ||++++||||+++
T Consensus 153 ~~~i~~liadAv~~V~---~dg-------vI~Ve~~~~-~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~ 221 (546)
T 3rtk_A 153 DQSIGDLIAEAMDKVG---NEG-------VITVEESNT-FGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLV 221 (546)
T ss_dssp CHHHHHHHHHHHHHSC---TTS-------EEEEECCSS-SSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEB
T ss_pred chHHHHHHHHHHHHhc---cCC-------ceEEEecCC-cccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEE
Confidence 6789999999999984 333 267776553 457999999999999999985 5778999999999
Q ss_pred eccCC
Q 024330 241 DFNLQ 245 (269)
Q Consensus 241 ~~~Le 245 (269)
||+++
T Consensus 222 d~kIs 226 (546)
T 3rtk_A 222 SSKVS 226 (546)
T ss_dssp SSEEC
T ss_pred CCccC
Confidence 99643
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.33 E-value=5.8e-13 Score=110.10 Aligned_cols=61 Identities=23% Similarity=0.261 Sum_probs=43.5
Q ss_pred cceeEEEEeEEEccccCCCCCCccccCcEEEEEeccCCccccccCcEEEECCHHHHHHHHh
Q 024330 208 ARDSYFLNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 208 ~~dS~lv~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
++||+|++|++|++++.+++||++++||||+++|||||+++++++++|.++++++|++|++
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~ 61 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQ 61 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHH
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHH
Confidence 3689999999999999999999999999999999999999999999999999999999875
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.04 E-value=1.9e-11 Score=99.10 Aligned_cols=55 Identities=25% Similarity=0.427 Sum_probs=52.9
Q ss_pred EEeEEEccccCCCCCCccccCcEEEEEeccCCccccccCcEEEECCHHHHHHHHh
Q 024330 214 LNGYALNAFRAAQGMPLRVAPAKIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQ 268 (269)
Q Consensus 214 v~Giv~~~~~~~~~~~~~~~~~kI~i~~~~Le~~k~~~~~~v~i~~~~~~~~~~~ 268 (269)
++|++|++++.+++||++++||||+++|||||+++++++++|.++++++|++|++
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~ 55 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLN 55 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHH
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999875
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=95.27 E-value=0.0031 Score=51.73 Aligned_cols=36 Identities=11% Similarity=-0.026 Sum_probs=30.6
Q ss_pred eEEEEeEEEccccCCCCCCc-------cccCcEEEEEeccCCc
Q 024330 211 SYFLNGYALNAFRAAQGMPL-------RVAPAKIACLDFNLQK 246 (269)
Q Consensus 211 S~lv~Giv~~~~~~~~~~~~-------~~~~~kI~i~~~~Le~ 246 (269)
.++++||.||++|.+|||.+ .++||+|++++..++-
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~ 44 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISS 44 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECC
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCC
Confidence 36789999999999999864 4789999999987763
No 30
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=93.34 E-value=0.025 Score=44.17 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=26.7
Q ss_pred eEEEccccCCCCCCc-------cccCcEEEEEeccCCc
Q 024330 216 GYALNAFRAAQGMPL-------RVAPAKIACLDFNLQK 246 (269)
Q Consensus 216 Giv~~~~~~~~~~~~-------~~~~~kI~i~~~~Le~ 246 (269)
||.||++|.+|||.+ .++||+|++++..++-
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~ 38 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSN 38 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccC
Confidence 899999999999865 3679999999988764
No 31
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=92.95 E-value=0.038 Score=45.40 Aligned_cols=31 Identities=10% Similarity=0.037 Sum_probs=26.9
Q ss_pred EeEEEccccCCCCCCc-------cccCcEEEEEeccCC
Q 024330 215 NGYALNAFRAAQGMPL-------RVAPAKIACLDFNLQ 245 (269)
Q Consensus 215 ~Giv~~~~~~~~~~~~-------~~~~~kI~i~~~~Le 245 (269)
+||.||++|.+|||.+ .++||+|++++..++
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs 50 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKIS 50 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEEC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCccC
Confidence 5999999999999865 478999999998764
No 32
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=25.52 E-value=1.3e+02 Score=18.87 Aligned_cols=33 Identities=12% Similarity=0.135 Sum_probs=23.2
Q ss_pred HHHHHHHHcCCChHhHHHHHHHH---HHHHHHHHhh
Q 024330 105 KRANDLVRNKIHPTSIISGYRLA---MREACKYVNE 137 (269)
Q Consensus 105 ~~~~~li~~gi~p~~Ii~g~~~a---~~~~l~~l~~ 137 (269)
.+..+|+..|+++..++++++.+ .+.+..+|.+
T Consensus 13 ~~Ia~Lm~mGFsr~~ai~AL~~a~nnve~AaniLle 48 (52)
T 2ooa_A 13 AKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILRE 48 (52)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 35667888999999998888766 3344444444
No 33
>1bh9_B TAFII28; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_B*
Probab=22.27 E-value=1.1e+02 Score=21.26 Aligned_cols=30 Identities=17% Similarity=0.352 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHc-----CCChHhHHHHHHHH
Q 024330 98 IVAAELLKRANDLVRN-----KIHPTSIISGYRLA 127 (269)
Q Consensus 98 lL~~~Ll~~~~~li~~-----gi~p~~Ii~g~~~a 127 (269)
+++|+|+++|.+.-+. -+.|..|.++|+.-
T Consensus 48 vfVgelVE~A~~V~~~~~~~~Pl~P~HireA~rrl 82 (89)
T 1bh9_B 48 VFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRL 82 (89)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHH
Confidence 5779999999887763 37788998888764
No 34
>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=20.79 E-value=1.7e+02 Score=18.43 Aligned_cols=32 Identities=16% Similarity=0.108 Sum_probs=23.2
Q ss_pred HHHHHHcCCChHhHHHHHHHH---HHHHHHHHhhh
Q 024330 107 ANDLVRNKIHPTSIISGYRLA---MREACKYVNEK 138 (269)
Q Consensus 107 ~~~li~~gi~p~~Ii~g~~~a---~~~~l~~l~~~ 138 (269)
...|+..|++...+++++..+ .+.+..+|.+.
T Consensus 13 I~~L~~lGF~r~~ai~AL~~a~nnve~Aa~iL~ef 47 (53)
T 2d9s_A 13 IERLMSQGYSYQDIQKALVIAHNNIEMAKNILREF 47 (53)
T ss_dssp HHHHHHHTCCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHhcCCHHHHHHHHHHh
Confidence 456788899999999888876 44555555554
Done!