Query 024331
Match_columns 269
No_of_seqs 129 out of 487
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 06:23:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024331.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024331hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1m6e_X S-adenosyl-L-methionnin 100.0 5.3E-83 1.8E-87 602.3 12.6 256 1-267 1-258 (359)
2 2efj_A 3,7-dimethylxanthine me 100.0 1.2E-80 4.1E-85 590.7 19.5 257 1-267 1-270 (384)
3 3b5i_A S-adenosyl-L-methionine 100.0 1.3E-78 4.5E-83 575.3 15.3 263 1-267 1-276 (374)
4 3kkz_A Uncharacterized protein 99.0 1.9E-09 6.4E-14 94.9 11.8 151 49-267 45-202 (267)
5 3f4k_A Putative methyltransfer 99.0 1.9E-09 6.7E-14 93.6 11.4 150 50-267 46-202 (257)
6 3dtn_A Putative methyltransfer 99.0 5.4E-09 1.8E-13 89.7 13.8 111 49-223 43-153 (234)
7 4hg2_A Methyltransferase type 98.9 1.1E-09 3.8E-14 97.9 7.3 102 50-223 39-140 (257)
8 2p35_A Trans-aconitate 2-methy 98.9 1.2E-09 4.2E-14 94.9 6.0 128 15-221 8-135 (259)
9 4gek_A TRNA (CMO5U34)-methyltr 98.9 4.5E-09 1.5E-13 94.0 9.6 111 50-222 70-182 (261)
10 2aot_A HMT, histamine N-methyl 98.8 1.3E-08 4.5E-13 91.1 10.8 114 50-221 52-175 (292)
11 3bus_A REBM, methyltransferase 98.8 5.5E-08 1.9E-12 85.2 12.8 111 50-223 61-171 (273)
12 2yqz_A Hypothetical protein TT 98.8 9.8E-09 3.4E-13 89.1 7.5 104 49-218 38-141 (263)
13 1pjz_A Thiopurine S-methyltran 98.8 1.5E-08 5.1E-13 86.4 8.1 81 50-161 22-114 (203)
14 2o57_A Putative sarcosine dime 98.8 9E-08 3.1E-12 85.2 13.4 111 50-223 82-192 (297)
15 3dlc_A Putative S-adenosyl-L-m 98.8 4.3E-08 1.5E-12 82.2 10.5 81 51-161 44-124 (219)
16 3bgv_A MRNA CAP guanine-N7 met 98.7 8.6E-08 2.9E-12 86.4 12.9 118 49-221 33-158 (313)
17 2p8j_A S-adenosylmethionine-de 98.7 1.1E-07 3.7E-12 79.8 12.7 111 50-223 23-133 (209)
18 3ujc_A Phosphoethanolamine N-m 98.7 6.8E-08 2.3E-12 83.7 11.3 111 49-223 54-164 (266)
19 3dli_A Methyltransferase; PSI- 98.7 1.2E-08 4E-13 88.4 6.1 103 49-222 40-144 (240)
20 4df3_A Fibrillarin-like rRNA/T 98.7 8E-08 2.7E-12 85.1 11.4 144 50-266 77-222 (233)
21 1vl5_A Unknown conserved prote 98.7 5.2E-08 1.8E-12 85.1 10.1 108 50-222 37-144 (260)
22 1nkv_A Hypothetical protein YJ 98.7 1.6E-07 5.5E-12 81.3 12.9 110 50-223 36-145 (256)
23 3dh0_A SAM dependent methyltra 98.7 1E-07 3.4E-12 80.7 11.4 137 50-250 37-173 (219)
24 4htf_A S-adenosylmethionine-de 98.7 5.6E-08 1.9E-12 86.2 10.1 108 48-221 66-176 (285)
25 3vc1_A Geranyl diphosphate 2-C 98.7 8.6E-08 2.9E-12 86.5 11.3 110 50-223 117-226 (312)
26 3ou2_A SAM-dependent methyltra 98.7 8.1E-08 2.8E-12 80.8 10.4 105 50-222 46-150 (218)
27 3ccf_A Cyclopropane-fatty-acyl 98.7 1.3E-08 4.4E-13 90.2 4.4 127 15-222 32-158 (279)
28 3jwh_A HEN1; methyltransferase 98.7 1.1E-07 3.9E-12 80.7 10.0 113 50-219 29-142 (217)
29 3g5l_A Putative S-adenosylmeth 98.6 7.5E-08 2.6E-12 83.6 8.9 104 50-220 44-147 (253)
30 3mgg_A Methyltransferase; NYSG 98.6 1.2E-07 4E-12 83.4 10.1 110 49-221 36-145 (276)
31 3jwg_A HEN1, methyltransferase 98.6 7E-08 2.4E-12 82.0 8.0 110 50-219 29-142 (219)
32 3g5t_A Trans-aconitate 3-methy 98.6 8.4E-08 2.9E-12 85.8 8.5 111 50-221 36-152 (299)
33 1y8c_A S-adenosylmethionine-de 98.6 2.7E-07 9.4E-12 78.8 11.3 109 49-221 36-145 (246)
34 3h2b_A SAM-dependent methyltra 98.6 5.2E-08 1.8E-12 81.7 6.6 105 51-223 42-146 (203)
35 3i53_A O-methyltransferase; CO 98.6 2.5E-07 8.5E-12 84.2 11.5 113 49-224 168-280 (332)
36 1ve3_A Hypothetical protein PH 98.6 4.2E-07 1.4E-11 77.0 12.1 108 50-221 38-145 (227)
37 3l8d_A Methyltransferase; stru 98.6 9.1E-08 3.1E-12 82.1 8.0 105 50-222 53-157 (242)
38 1xtp_A LMAJ004091AAA; SGPP, st 98.6 2.2E-07 7.6E-12 80.2 10.5 108 50-221 93-200 (254)
39 3sm3_A SAM-dependent methyltra 98.6 2.4E-07 8.2E-12 78.6 10.3 116 49-222 29-145 (235)
40 1ri5_A MRNA capping enzyme; me 98.6 4.8E-07 1.6E-11 79.8 12.2 113 49-221 63-177 (298)
41 2a14_A Indolethylamine N-methy 98.6 2.2E-07 7.4E-12 82.1 9.6 134 32-221 37-200 (263)
42 3ofk_A Nodulation protein S; N 98.6 3E-07 1E-11 77.7 10.1 107 49-221 50-157 (216)
43 3hem_A Cyclopropane-fatty-acyl 98.6 4.2E-07 1.4E-11 81.4 11.5 117 50-223 72-188 (302)
44 2gb4_A Thiopurine S-methyltran 98.6 1.7E-07 5.8E-12 83.2 8.8 81 50-161 68-165 (252)
45 3gwz_A MMCR; methyltransferase 98.6 6.7E-07 2.3E-11 83.0 13.1 112 49-223 201-312 (369)
46 3e23_A Uncharacterized protein 98.6 9.5E-08 3.3E-12 80.7 6.7 103 50-222 43-145 (211)
47 4fsd_A Arsenic methyltransfera 98.5 2.5E-07 8.7E-12 86.4 10.1 115 50-223 83-208 (383)
48 1xxl_A YCGJ protein; structura 98.5 3.8E-07 1.3E-11 78.9 10.3 109 49-222 20-128 (239)
49 3hnr_A Probable methyltransfer 98.5 3.3E-07 1.1E-11 77.5 9.6 105 50-222 45-149 (220)
50 3g07_A 7SK snRNA methylphospha 98.5 2E-07 6.8E-12 83.8 8.6 60 136-222 160-224 (292)
51 3ege_A Putative methyltransfer 98.5 9.3E-08 3.2E-12 84.0 6.2 144 49-266 33-185 (261)
52 2p7i_A Hypothetical protein; p 98.5 1E-07 3.5E-12 81.3 6.3 102 51-222 43-145 (250)
53 2ex4_A Adrenal gland protein A 98.5 1.5E-07 5.1E-12 81.4 7.4 111 50-222 79-189 (241)
54 3dp7_A SAM-dependent methyltra 98.5 1.4E-07 4.9E-12 87.4 7.7 111 50-223 179-292 (363)
55 2r3s_A Uncharacterized protein 98.5 1.7E-06 5.9E-11 78.1 14.7 113 49-223 164-276 (335)
56 2vdw_A Vaccinia virus capping 98.5 1.8E-07 6.1E-12 85.2 8.1 116 49-221 47-172 (302)
57 3thr_A Glycine N-methyltransfe 98.5 8.2E-08 2.8E-12 85.1 5.5 114 50-220 57-177 (293)
58 3lcc_A Putative methyl chlorid 98.5 2.5E-07 8.4E-12 79.6 8.3 109 51-222 67-175 (235)
59 3mcz_A O-methyltransferase; ad 98.5 5.5E-07 1.9E-11 82.3 11.1 112 51-223 180-292 (352)
60 2g72_A Phenylethanolamine N-me 98.5 8.5E-08 2.9E-12 85.4 4.9 47 144-219 170-216 (289)
61 2ip2_A Probable phenazine-spec 98.5 1.4E-06 4.9E-11 79.0 13.0 108 52-223 169-277 (334)
62 2gs9_A Hypothetical protein TT 98.5 3.9E-07 1.4E-11 76.7 8.4 100 50-222 36-136 (211)
63 3m70_A Tellurite resistance pr 98.5 4.2E-07 1.4E-11 80.5 8.9 107 50-221 120-226 (286)
64 1wzn_A SAM-dependent methyltra 98.5 2.3E-06 8E-11 73.9 13.4 122 31-220 25-147 (252)
65 2pxx_A Uncharacterized protein 98.4 6.2E-07 2.1E-11 75.0 9.0 122 49-221 41-162 (215)
66 2xvm_A Tellurite resistance pr 98.4 7.2E-07 2.5E-11 73.8 9.1 105 51-219 33-137 (199)
67 3pfg_A N-methyltransferase; N, 98.4 4.7E-07 1.6E-11 79.1 8.4 103 49-219 49-152 (263)
68 2qe6_A Uncharacterized protein 98.4 1.2E-06 4.3E-11 78.4 11.2 109 51-222 78-200 (274)
69 3reo_A (ISO)eugenol O-methyltr 98.4 4.4E-07 1.5E-11 84.4 8.3 104 49-223 202-305 (368)
70 3lst_A CALO1 methyltransferase 98.4 3.2E-07 1.1E-11 84.3 7.2 109 49-224 183-292 (348)
71 1x19_A CRTF-related protein; m 98.4 2E-06 6.9E-11 79.1 12.5 112 49-223 189-300 (359)
72 3i9f_A Putative type 11 methyl 98.4 5E-07 1.7E-11 73.5 7.3 101 50-223 17-117 (170)
73 3p9c_A Caffeic acid O-methyltr 98.4 4.4E-07 1.5E-11 84.3 7.8 104 49-223 200-303 (364)
74 3g2m_A PCZA361.24; SAM-depende 98.4 4.5E-07 1.5E-11 81.1 7.5 109 51-222 83-194 (299)
75 3gu3_A Methyltransferase; alph 98.4 5.2E-07 1.8E-11 80.3 7.6 108 49-220 21-128 (284)
76 3ocj_A Putative exported prote 98.4 9.2E-07 3.2E-11 79.5 9.3 115 49-223 117-232 (305)
77 1kpg_A CFA synthase;, cyclopro 98.4 1.8E-06 6.2E-11 76.3 10.9 108 50-222 64-172 (287)
78 3bxo_A N,N-dimethyltransferase 98.4 2.4E-06 8.3E-11 72.8 11.3 106 49-222 39-145 (239)
79 3q7e_A Protein arginine N-meth 98.4 1.3E-06 4.6E-11 80.7 9.9 107 50-217 66-172 (349)
80 3hp7_A Hemolysin, putative; st 98.4 1.7E-06 5.9E-11 78.9 10.3 142 36-250 73-224 (291)
81 2avn_A Ubiquinone/menaquinone 98.4 5.6E-07 1.9E-11 78.8 6.9 102 50-222 54-156 (260)
82 2kw5_A SLR1183 protein; struct 98.4 9.5E-07 3.2E-11 73.8 7.8 105 53-223 32-136 (202)
83 1zx0_A Guanidinoacetate N-meth 98.3 8.4E-07 2.9E-11 76.6 7.4 138 50-251 60-203 (236)
84 3bkw_A MLL3908 protein, S-aden 98.3 6.1E-07 2.1E-11 76.7 6.5 104 50-220 43-146 (243)
85 3bkx_A SAM-dependent methyltra 98.3 6.9E-06 2.4E-10 71.8 13.2 119 50-223 43-164 (275)
86 3dxy_A TRNA (guanine-N(7)-)-me 98.3 3.2E-07 1.1E-11 79.5 4.4 105 23-161 3-118 (218)
87 2zfu_A Nucleomethylin, cerebra 98.3 4.3E-07 1.5E-11 76.8 5.1 61 50-160 67-127 (215)
88 3r0q_C Probable protein argini 98.3 3.6E-06 1.2E-10 78.6 11.5 109 49-219 62-170 (376)
89 2plw_A Ribosomal RNA methyltra 98.3 4E-06 1.4E-10 69.9 10.6 110 50-220 22-156 (201)
90 2fca_A TRNA (guanine-N(7)-)-me 98.3 1.5E-06 5E-11 74.6 8.0 80 51-161 39-121 (213)
91 2fk8_A Methoxy mycolic acid sy 98.3 4.3E-06 1.5E-10 75.2 11.3 109 50-223 90-199 (318)
92 1fp1_D Isoliquiritigenin 2'-O- 98.3 2.6E-06 9E-11 78.9 10.1 104 49-223 208-311 (372)
93 1nt2_A Fibrillarin-like PRE-rR 98.3 4.1E-06 1.4E-10 71.9 10.5 36 50-100 57-92 (210)
94 2i62_A Nicotinamide N-methyltr 98.3 2E-06 6.8E-11 74.5 8.6 56 136-220 141-200 (265)
95 1yzh_A TRNA (guanine-N(7)-)-me 98.3 2.9E-06 9.9E-11 72.1 9.5 80 51-161 42-124 (214)
96 3hm2_A Precorrin-6Y C5,15-meth 98.3 2.4E-06 8.4E-11 69.5 8.6 79 50-160 25-106 (178)
97 3iv6_A Putative Zn-dependent a 98.3 2.1E-06 7.2E-11 77.0 8.5 100 50-219 45-149 (261)
98 3dmg_A Probable ribosomal RNA 98.3 6.4E-06 2.2E-10 77.5 12.2 108 50-218 233-340 (381)
99 3e8s_A Putative SAM dependent 98.3 2.3E-06 7.9E-11 71.9 8.3 101 50-222 52-156 (227)
100 3sso_A Methyltransferase; macr 98.3 3E-06 1E-10 80.9 9.8 129 49-249 215-361 (419)
101 3ggd_A SAM-dependent methyltra 98.3 1E-06 3.5E-11 76.0 6.0 108 49-222 55-167 (245)
102 4a6d_A Hydroxyindole O-methylt 98.3 3.6E-06 1.2E-10 77.8 10.1 109 50-223 179-288 (353)
103 3cgg_A SAM-dependent methyltra 98.3 3.6E-06 1.2E-10 68.9 9.0 104 50-221 46-150 (195)
104 1qzz_A RDMB, aclacinomycin-10- 98.2 2.6E-06 9E-11 78.3 8.5 108 49-219 181-288 (374)
105 3d2l_A SAM-dependent methyltra 98.2 5E-06 1.7E-10 71.0 9.7 105 51-220 34-139 (243)
106 1vlm_A SAM-dependent methyltra 98.2 5.9E-06 2E-10 70.3 9.9 95 51-221 48-142 (219)
107 3cc8_A Putative methyltransfer 98.2 3E-06 1E-10 71.3 7.7 99 50-220 32-132 (230)
108 3p9n_A Possible methyltransfer 98.2 5.6E-06 1.9E-10 68.8 9.1 110 50-222 44-157 (189)
109 3mti_A RRNA methylase; SAM-dep 98.2 8.6E-06 2.9E-10 67.1 10.0 116 49-221 21-138 (185)
110 4e2x_A TCAB9; kijanose, tetron 98.2 4.3E-07 1.5E-11 85.1 2.2 104 50-220 107-210 (416)
111 1tw3_A COMT, carminomycin 4-O- 98.2 4.7E-06 1.6E-10 76.3 9.0 108 50-220 183-290 (360)
112 3orh_A Guanidinoacetate N-meth 98.2 5.7E-06 1.9E-10 72.1 8.9 149 50-263 60-214 (236)
113 1fp2_A Isoflavone O-methyltran 98.2 6E-06 2.1E-10 75.8 9.3 103 50-223 188-293 (352)
114 3fzg_A 16S rRNA methylase; met 98.2 1.1E-06 3.8E-11 76.1 4.0 142 49-263 48-189 (200)
115 2fyt_A Protein arginine N-meth 98.2 1.3E-05 4.5E-10 73.8 11.4 105 50-215 64-168 (340)
116 1ej0_A FTSJ; methyltransferase 98.1 2.2E-05 7.5E-10 62.7 11.4 110 50-221 22-139 (180)
117 3lbf_A Protein-L-isoaspartate 98.1 1.3E-05 4.5E-10 67.3 10.2 100 50-220 77-176 (210)
118 3mq2_A 16S rRNA methyltransfer 98.1 3E-06 1E-10 71.9 6.1 73 50-153 27-103 (218)
119 3q87_B N6 adenine specific DNA 98.1 4.9E-06 1.7E-10 68.7 7.1 73 51-166 24-96 (170)
120 1dus_A MJ0882; hypothetical pr 98.1 4.2E-06 1.4E-10 68.5 6.5 109 50-221 52-160 (194)
121 4dzr_A Protein-(glutamine-N5) 98.1 1.7E-06 5.7E-11 72.2 4.1 130 49-220 29-166 (215)
122 1p91_A Ribosomal RNA large sub 98.1 9.4E-06 3.2E-10 70.9 9.1 72 50-156 85-156 (269)
123 3grz_A L11 mtase, ribosomal pr 98.1 1E-05 3.6E-10 67.8 8.7 104 50-222 60-163 (205)
124 3id6_C Fibrillarin-like rRNA/T 98.1 3.6E-06 1.2E-10 74.2 5.8 63 17-100 50-112 (232)
125 3uwp_A Histone-lysine N-methyl 98.1 7.6E-06 2.6E-10 78.4 8.1 114 50-219 173-289 (438)
126 1g6q_1 HnRNP arginine N-methyl 98.1 1.9E-05 6.5E-10 72.2 10.4 105 51-216 39-143 (328)
127 3eey_A Putative rRNA methylase 98.0 1.5E-05 5.1E-10 66.3 8.8 120 50-221 22-142 (197)
128 1af7_A Chemotaxis receptor met 98.0 1.4E-05 4.7E-10 72.1 8.9 44 50-100 105-148 (274)
129 1zg3_A Isoflavanone 4'-O-methy 98.0 9.8E-06 3.4E-10 74.5 7.5 103 50-223 193-298 (358)
130 2pjd_A Ribosomal RNA small sub 98.0 3.2E-06 1.1E-10 77.7 4.1 108 51-219 197-304 (343)
131 3ckk_A TRNA (guanine-N(7)-)-me 98.0 1.1E-05 3.8E-10 70.5 7.4 87 50-160 46-135 (235)
132 2nyu_A Putative ribosomal RNA 98.0 2.2E-05 7.4E-10 65.0 8.6 116 50-220 22-147 (196)
133 4dcm_A Ribosomal RNA large sub 98.0 1E-05 3.4E-10 75.9 7.2 112 51-218 223-334 (375)
134 1fbn_A MJ fibrillarin homologu 98.0 8.6E-05 2.9E-09 63.8 12.5 71 50-153 74-148 (230)
135 3opn_A Putative hemolysin; str 98.0 7.4E-06 2.5E-10 71.8 5.8 48 35-100 24-71 (232)
136 3giw_A Protein of unknown func 98.0 1.8E-05 6.3E-10 71.7 8.4 114 50-222 78-204 (277)
137 2yxe_A Protein-L-isoaspartate 98.0 5.7E-05 2E-09 63.6 10.8 83 50-161 77-159 (215)
138 2ipx_A RRNA 2'-O-methyltransfe 97.9 1.9E-05 6.4E-10 67.9 7.6 75 50-155 77-154 (233)
139 3e05_A Precorrin-6Y C5,15-meth 97.9 9.8E-05 3.4E-09 61.8 11.9 121 50-250 40-160 (204)
140 1vbf_A 231AA long hypothetical 97.9 3.8E-05 1.3E-09 65.4 9.2 78 50-161 70-147 (231)
141 1xdz_A Methyltransferase GIDB; 97.9 1.3E-05 4.3E-10 69.5 6.0 134 50-263 70-206 (240)
142 2pbf_A Protein-L-isoaspartate 97.9 4.3E-05 1.5E-09 65.0 9.2 88 50-160 80-174 (227)
143 3evz_A Methyltransferase; NYSG 97.9 0.0002 6.8E-09 60.8 13.1 143 49-250 54-198 (230)
144 2esr_A Methyltransferase; stru 97.9 2.3E-05 8E-10 64.0 6.8 110 50-222 31-142 (177)
145 1jsx_A Glucose-inhibited divis 97.9 5.8E-05 2E-09 63.0 9.4 100 51-218 66-165 (207)
146 4hc4_A Protein arginine N-meth 97.9 3.6E-05 1.2E-09 72.5 8.9 105 51-217 84-188 (376)
147 1i1n_A Protein-L-isoaspartate 97.9 9.1E-05 3.1E-09 62.9 10.4 82 50-159 77-162 (226)
148 1dl5_A Protein-L-isoaspartate 97.8 6.6E-05 2.2E-09 68.1 9.8 83 50-161 75-157 (317)
149 1jg1_A PIMT;, protein-L-isoasp 97.8 5.5E-05 1.9E-09 65.1 8.8 79 51-161 92-171 (235)
150 2b3t_A Protein methyltransfera 97.8 0.00011 3.9E-09 64.8 11.0 126 50-218 109-238 (276)
151 3mb5_A SAM-dependent methyltra 97.8 0.00013 4.4E-09 63.1 10.8 76 50-154 93-168 (255)
152 2y1w_A Histone-arginine methyl 97.8 8.9E-05 3.1E-09 68.3 10.3 78 50-159 50-127 (348)
153 1r18_A Protein-L-isoaspartate( 97.8 6.2E-05 2.1E-09 64.4 8.6 89 50-161 84-176 (227)
154 3tfw_A Putative O-methyltransf 97.8 7.3E-05 2.5E-09 65.3 9.1 37 50-100 63-99 (248)
155 3lpm_A Putative methyltransfer 97.8 5.6E-05 1.9E-09 66.2 8.0 126 50-218 49-176 (259)
156 1o9g_A RRNA methyltransferase; 97.8 0.00035 1.2E-08 60.5 13.0 37 50-99 51-87 (250)
157 2ozv_A Hypothetical protein AT 97.8 3.7E-05 1.3E-09 67.8 6.7 123 50-218 36-170 (260)
158 3htx_A HEN1; HEN1, small RNA m 97.8 0.00015 5.3E-09 74.7 11.8 87 50-162 721-810 (950)
159 1u2z_A Histone-lysine N-methyl 97.8 0.00014 4.7E-09 69.7 10.9 36 50-100 242-277 (433)
160 3fpf_A Mtnas, putative unchara 97.8 9.4E-05 3.2E-09 67.7 9.3 72 49-155 121-195 (298)
161 3m33_A Uncharacterized protein 97.7 4.4E-05 1.5E-09 65.3 6.0 69 50-155 48-118 (226)
162 2ld4_A Anamorsin; methyltransf 97.7 7.5E-05 2.6E-09 61.1 7.1 78 137-252 49-130 (176)
163 2pwy_A TRNA (adenine-N(1)-)-me 97.7 0.00022 7.6E-09 61.4 10.4 77 50-154 96-172 (258)
164 3g89_A Ribosomal RNA small sub 97.7 7.5E-05 2.6E-09 65.8 7.3 75 50-154 80-157 (249)
165 2fhp_A Methylase, putative; al 97.7 6E-05 2E-09 61.6 6.1 110 50-222 44-158 (187)
166 1yb2_A Hypothetical protein TA 97.7 0.0002 6.9E-09 63.3 9.9 75 50-154 110-185 (275)
167 2ift_A Putative methylase HI07 97.7 6.7E-05 2.3E-09 63.4 6.5 34 51-100 54-87 (201)
168 3gdh_A Trimethylguanosine synt 97.7 4.5E-06 1.5E-10 71.9 -1.1 86 50-167 78-163 (241)
169 3frh_A 16S rRNA methylase; met 97.6 9.9E-05 3.4E-09 66.0 7.6 154 33-263 90-243 (253)
170 1i9g_A Hypothetical protein RV 97.6 0.00034 1.2E-08 61.2 10.7 79 50-154 99-177 (280)
171 1g8a_A Fibrillarin-like PRE-rR 97.6 0.00095 3.3E-08 56.6 13.2 36 50-99 73-108 (227)
172 3u81_A Catechol O-methyltransf 97.6 8.6E-05 3E-09 63.3 6.3 37 50-100 58-94 (221)
173 3p2e_A 16S rRNA methylase; met 97.6 0.00011 3.9E-09 63.5 7.2 36 50-100 24-59 (225)
174 2nxc_A L11 mtase, ribosomal pr 97.6 0.00023 7.9E-09 62.5 9.2 76 50-159 120-195 (254)
175 2fpo_A Methylase YHHF; structu 97.6 0.00011 3.6E-09 62.2 6.8 77 51-159 55-133 (202)
176 2vdv_E TRNA (guanine-N(7)-)-me 97.6 0.00035 1.2E-08 60.6 10.1 36 50-100 49-84 (246)
177 1ws6_A Methyltransferase; stru 97.6 0.00011 3.8E-09 59.0 6.3 34 50-100 41-74 (171)
178 3bwc_A Spermidine synthase; SA 97.6 0.00015 5.1E-09 65.7 7.8 149 49-264 94-245 (304)
179 3duw_A OMT, O-methyltransferas 97.5 0.00023 7.9E-09 60.2 7.5 37 50-100 58-94 (223)
180 2gpy_A O-methyltransferase; st 97.5 0.00021 7.2E-09 61.1 7.2 35 51-100 55-89 (233)
181 3njr_A Precorrin-6Y methylase; 97.5 0.0012 4.2E-08 55.8 12.0 34 50-100 55-88 (204)
182 2wa2_A Non-structural protein 97.5 0.00057 1.9E-08 61.4 10.3 112 50-220 82-195 (276)
183 1o54_A SAM-dependent O-methylt 97.5 0.00048 1.7E-08 60.7 9.7 76 50-154 112-187 (277)
184 1l3i_A Precorrin-6Y methyltran 97.5 0.00035 1.2E-08 56.7 8.1 102 50-220 33-136 (192)
185 3dou_A Ribosomal RNA large sub 97.5 0.00081 2.8E-08 56.6 10.4 107 49-220 24-141 (191)
186 2oxt_A Nucleoside-2'-O-methylt 97.5 0.00071 2.4E-08 60.3 10.5 112 50-220 74-187 (265)
187 2xyq_A Putative 2'-O-methyl tr 97.4 0.00054 1.8E-08 62.2 9.3 69 49-160 62-135 (290)
188 3ntv_A MW1564 protein; rossman 97.4 0.00064 2.2E-08 58.5 9.3 36 50-100 71-106 (232)
189 3dr5_A Putative O-methyltransf 97.4 0.00037 1.3E-08 60.1 7.5 35 52-100 58-92 (221)
190 3adn_A Spermidine synthase; am 97.4 0.0035 1.2E-07 56.6 14.1 37 49-100 82-118 (294)
191 3tma_A Methyltransferase; thum 97.4 0.00059 2E-08 62.6 9.0 115 50-219 203-318 (354)
192 3r3h_A O-methyltransferase, SA 97.4 0.00042 1.4E-08 60.5 7.6 37 50-100 60-96 (242)
193 3b3j_A Histone-arginine methyl 97.4 0.00058 2E-08 66.0 9.3 76 50-157 158-233 (480)
194 2frn_A Hypothetical protein PH 97.3 0.00087 3E-08 59.6 9.7 72 51-154 126-198 (278)
195 2yxd_A Probable cobalt-precorr 97.3 0.0011 3.8E-08 53.3 9.4 75 50-157 35-109 (183)
196 1ixk_A Methyltransferase; open 97.3 0.00077 2.6E-08 61.3 9.3 129 51-222 119-250 (315)
197 1sqg_A SUN protein, FMU protei 97.3 0.00065 2.2E-08 64.3 9.1 127 51-222 247-378 (429)
198 1zq9_A Probable dimethyladenos 97.3 0.00023 7.7E-09 63.9 5.5 80 50-163 28-108 (285)
199 2h00_A Methyltransferase 10 do 97.3 0.00034 1.2E-08 60.6 6.3 83 50-162 65-154 (254)
200 3gjy_A Spermidine synthase; AP 97.3 0.00023 7.8E-09 65.6 5.3 81 49-160 88-171 (317)
201 2p41_A Type II methyltransfera 97.3 0.00082 2.8E-08 61.1 8.6 20 50-69 82-101 (305)
202 3bzb_A Uncharacterized protein 97.2 0.00057 1.9E-08 60.8 6.5 35 50-100 79-113 (281)
203 2b25_A Hypothetical protein; s 97.2 0.00067 2.3E-08 61.6 7.0 36 50-99 105-140 (336)
204 3tr6_A O-methyltransferase; ce 97.1 0.00054 1.9E-08 57.9 5.9 37 50-100 64-100 (225)
205 2bm8_A Cephalosporin hydroxyla 97.1 0.00057 1.9E-08 59.4 6.1 39 51-100 82-120 (236)
206 2hnk_A SAM-dependent O-methylt 97.1 0.002 6.8E-08 55.3 9.4 35 51-99 61-95 (239)
207 3lcv_B Sisomicin-gentamicin re 97.1 0.0014 4.7E-08 59.3 8.6 142 49-263 131-273 (281)
208 2frx_A Hypothetical protein YE 97.1 0.002 6.8E-08 62.3 10.3 130 50-222 117-250 (479)
209 3ajd_A Putative methyltransfer 97.1 0.0004 1.4E-08 61.6 4.5 128 51-222 84-215 (274)
210 2yvl_A TRMI protein, hypotheti 97.0 0.0021 7.3E-08 54.7 8.6 74 50-154 91-164 (248)
211 2igt_A SAM dependent methyltra 97.0 0.0016 5.5E-08 59.8 8.0 118 50-221 153-275 (332)
212 2yxl_A PH0851 protein, 450AA l 97.0 0.0017 5.7E-08 61.9 8.3 129 51-222 260-393 (450)
213 1nv8_A HEMK protein; class I a 97.0 0.0029 9.8E-08 56.7 9.3 34 51-100 124-157 (284)
214 3lec_A NADB-rossmann superfami 97.0 0.0012 4.1E-08 58.1 6.4 77 50-156 21-98 (230)
215 1uir_A Polyamine aminopropyltr 97.0 0.00027 9.3E-09 64.3 2.3 85 49-160 76-163 (314)
216 2avd_A Catechol-O-methyltransf 96.9 0.0018 6E-08 54.8 7.0 37 50-100 69-105 (229)
217 3gnl_A Uncharacterized protein 96.9 0.0015 5.1E-08 58.0 6.5 131 50-222 21-163 (244)
218 3m6w_A RRNA methylase; rRNA me 96.9 0.002 6.8E-08 62.2 7.7 129 50-222 101-233 (464)
219 1wxx_A TT1595, hypothetical pr 96.9 0.0028 9.5E-08 58.9 8.4 115 50-221 209-328 (382)
220 3a27_A TYW2, uncharacterized p 96.9 0.0017 5.7E-08 57.7 6.5 35 50-99 119-153 (272)
221 1xj5_A Spermidine synthase 1; 96.8 0.00079 2.7E-08 62.1 4.5 37 49-100 119-155 (334)
222 1iy9_A Spermidine synthase; ro 96.8 0.0026 9E-08 56.6 7.7 37 49-100 74-110 (275)
223 3cbg_A O-methyltransferase; cy 96.8 0.0017 6E-08 55.8 6.2 35 51-99 73-107 (232)
224 3c3y_A Pfomt, O-methyltransfer 96.8 0.0043 1.5E-07 53.6 8.5 36 50-99 70-105 (237)
225 1sui_A Caffeoyl-COA O-methyltr 96.8 0.0046 1.6E-07 54.0 8.7 37 50-100 79-115 (247)
226 2b2c_A Spermidine synthase; be 96.7 0.0029 9.8E-08 57.8 7.0 36 50-100 108-143 (314)
227 2i7c_A Spermidine synthase; tr 96.7 0.0038 1.3E-07 55.8 7.6 37 49-100 77-113 (283)
228 3c3p_A Methyltransferase; NP_9 96.7 0.00071 2.4E-08 56.8 2.6 36 50-99 56-91 (210)
229 4dmg_A Putative uncharacterize 96.7 0.0057 1.9E-07 57.6 8.9 113 51-221 215-329 (393)
230 3kr9_A SAM-dependent methyltra 96.6 0.003 1E-07 55.3 6.2 36 50-100 15-50 (225)
231 1ne2_A Hypothetical protein TA 96.6 0.0054 1.8E-07 50.8 7.5 75 50-163 51-125 (200)
232 2pt6_A Spermidine synthase; tr 96.5 0.0029 9.8E-08 57.8 5.9 37 49-100 115-151 (321)
233 1inl_A Spermidine synthase; be 96.5 0.0009 3.1E-08 60.3 2.0 37 49-100 89-125 (296)
234 2o07_A Spermidine synthase; st 96.4 0.0028 9.4E-08 57.5 4.7 37 49-100 94-130 (304)
235 2b78_A Hypothetical protein SM 96.4 0.021 7.3E-07 53.2 10.8 115 51-221 213-334 (385)
236 2as0_A Hypothetical protein PH 96.4 0.016 5.5E-07 53.8 9.9 117 50-221 217-338 (396)
237 2qm3_A Predicted methyltransfe 96.3 0.02 6.8E-07 52.9 10.0 106 50-220 172-280 (373)
238 2ih2_A Modification methylase 96.3 0.027 9.1E-07 52.0 10.8 122 50-221 39-167 (421)
239 3m4x_A NOL1/NOP2/SUN family pr 96.2 0.0035 1.2E-07 60.4 4.5 129 50-222 105-238 (456)
240 4gqb_A Protein arginine N-meth 96.1 0.0069 2.3E-07 60.7 6.3 102 20-154 333-434 (637)
241 4azs_A Methyltransferase WBDD; 96.1 0.003 1E-07 61.9 3.5 82 49-163 65-149 (569)
242 1mjf_A Spermidine synthase; sp 96.0 0.0066 2.2E-07 54.1 5.1 36 49-100 74-109 (281)
243 2f8l_A Hypothetical protein LM 96.0 0.026 8.8E-07 51.4 9.1 85 50-161 130-214 (344)
244 3tm4_A TRNA (guanine N2-)-meth 95.8 0.022 7.6E-07 52.7 7.8 74 50-155 217-293 (373)
245 3v97_A Ribosomal RNA large sub 95.7 0.017 5.9E-07 58.3 7.2 121 51-222 540-661 (703)
246 3gru_A Dimethyladenosine trans 95.6 0.035 1.2E-06 50.2 8.4 80 50-163 50-129 (295)
247 2h1r_A Dimethyladenosine trans 95.6 0.007 2.4E-07 54.5 3.6 80 50-163 42-121 (299)
248 1wy7_A Hypothetical protein PH 95.4 0.047 1.6E-06 45.1 7.7 77 50-162 49-126 (207)
249 3evf_A RNA-directed RNA polyme 95.4 0.2 7E-06 45.1 12.3 20 50-69 74-93 (277)
250 3c0k_A UPF0064 protein YCCW; P 95.3 0.014 4.7E-07 54.4 4.5 117 51-221 221-342 (396)
251 2cmg_A Spermidine synthase; tr 95.3 0.025 8.6E-07 50.0 6.0 34 49-99 71-104 (262)
252 1qam_A ERMC' methyltransferase 94.8 0.016 5.5E-07 50.4 3.4 75 50-159 30-105 (244)
253 3ua3_A Protein arginine N-meth 94.8 0.039 1.3E-06 55.9 6.4 109 20-154 388-501 (745)
254 2qy6_A UPF0209 protein YFCK; s 94.5 0.029 1E-06 49.7 4.3 23 50-72 60-82 (257)
255 2yx1_A Hypothetical protein MJ 94.3 0.058 2E-06 49.1 5.8 33 50-100 195-227 (336)
256 3tqs_A Ribosomal RNA small sub 93.9 0.14 4.7E-06 45.2 7.4 52 50-105 29-92 (255)
257 2b9e_A NOL1/NOP2/SUN domain fa 93.8 0.25 8.7E-06 44.7 9.2 36 51-100 103-138 (309)
258 3fut_A Dimethyladenosine trans 93.7 0.025 8.4E-07 50.6 2.1 76 53-163 49-133 (271)
259 2jjq_A Uncharacterized RNA met 93.7 0.078 2.7E-06 50.2 5.7 33 51-100 291-323 (425)
260 3ldu_A Putative methylase; str 93.4 0.59 2E-05 43.4 11.1 90 50-154 195-307 (385)
261 3gcz_A Polyprotein; flavivirus 93.2 0.99 3.4E-05 40.7 11.8 36 50-100 90-125 (282)
262 3k0b_A Predicted N6-adenine-sp 92.9 0.81 2.8E-05 42.7 11.3 87 50-154 201-313 (393)
263 3s1s_A Restriction endonucleas 92.9 1.3 4.5E-05 45.6 13.5 129 50-220 321-467 (878)
264 1uwv_A 23S rRNA (uracil-5-)-me 92.7 0.22 7.5E-06 46.9 7.2 73 50-154 286-362 (433)
265 3khk_A Type I restriction-modi 92.4 0.68 2.3E-05 45.2 10.3 92 50-155 244-336 (544)
266 3ldg_A Putative uncharacterize 91.8 0.88 3E-05 42.4 10.0 21 50-70 194-214 (384)
267 2okc_A Type I restriction enzy 90.8 0.4 1.4E-05 45.1 6.6 22 51-72 172-193 (445)
268 3eld_A Methyltransferase; flav 90.5 2.6 9E-05 38.2 11.4 38 48-100 79-116 (300)
269 1m6y_A S-adenosyl-methyltransf 90.2 0.21 7.3E-06 45.1 4.0 19 51-69 27-45 (301)
270 1qyr_A KSGA, high level kasuga 90.0 0.4 1.4E-05 42.0 5.5 54 51-106 22-85 (252)
271 4auk_A Ribosomal RNA large sub 89.8 0.86 2.9E-05 42.7 7.8 90 30-159 186-281 (375)
272 1yub_A Ermam, rRNA methyltrans 89.2 0.33 1.1E-05 41.7 4.2 34 50-100 29-62 (245)
273 2k4m_A TR8_protein, UPF0146 pr 89.1 0.39 1.3E-05 39.6 4.3 35 50-100 35-70 (153)
274 3uzu_A Ribosomal RNA small sub 88.9 0.46 1.6E-05 42.3 5.1 21 50-70 42-62 (279)
275 3ftd_A Dimethyladenosine trans 88.7 0.18 6.1E-06 44.2 2.2 22 50-71 31-52 (249)
276 3k6r_A Putative transferase PH 87.9 0.37 1.3E-05 43.1 3.8 34 51-100 126-159 (278)
277 3lkd_A Type I restriction-modi 87.4 5.3 0.00018 38.9 12.0 38 50-99 221-258 (542)
278 3r24_A NSP16, 2'-O-methyl tran 87.3 1.2 4.2E-05 40.8 6.8 62 48-154 107-175 (344)
279 3v97_A Ribosomal RNA large sub 84.3 5.7 0.00019 39.8 10.7 21 50-70 190-210 (703)
280 2dul_A N(2),N(2)-dimethylguano 80.4 0.88 3E-05 42.3 2.9 35 51-100 48-82 (378)
281 2r6z_A UPF0341 protein in RSP 79.9 0.58 2E-05 41.1 1.4 32 51-99 84-115 (258)
282 3ll7_A Putative methyltransfer 77.0 1.9 6.4E-05 40.8 4.0 19 51-69 94-112 (410)
283 2zig_A TTHA0409, putative modi 72.8 6.5 0.00022 34.7 6.3 70 137-219 27-98 (297)
284 3pvc_A TRNA 5-methylaminomethy 71.8 2.1 7.2E-05 42.4 3.1 22 50-71 58-79 (689)
285 3lkz_A Non-structural protein 68.9 5.9 0.0002 36.2 5.1 37 51-102 95-131 (321)
286 3bt7_A TRNA (uracil-5-)-methyl 68.8 2.9 0.0001 38.1 3.2 32 52-100 215-246 (369)
287 3p8z_A Mtase, non-structural p 64.7 5 0.00017 35.7 3.6 38 50-102 78-115 (267)
288 2oyr_A UPF0341 protein YHIQ; a 64.0 2.3 7.9E-05 37.4 1.4 32 52-100 90-121 (258)
289 3axs_A Probable N(2),N(2)-dime 61.6 6.7 0.00023 36.6 4.2 67 12-100 22-88 (392)
290 2zig_A TTHA0409, putative modi 56.2 5.2 0.00018 35.3 2.3 33 51-100 236-268 (297)
291 3vyw_A MNMC2; tRNA wobble urid 55.3 7.5 0.00026 35.3 3.2 22 50-71 96-117 (308)
292 4fzv_A Putative methyltransfer 54.5 48 0.0017 30.3 8.6 38 51-103 149-186 (359)
293 2px2_A Genome polyprotein [con 46.9 11 0.00038 33.6 2.8 20 50-69 73-92 (269)
294 2qfm_A Spermine synthase; sper 44.9 8.4 0.00029 35.8 1.8 37 48-100 186-222 (364)
295 1boo_A Protein (N-4 cytosine-s 36.5 38 0.0013 30.2 4.7 58 143-219 28-85 (323)
296 1d0q_A DNA primase; zinc-bindi 36.0 32 0.0011 25.6 3.5 20 53-72 58-77 (103)
297 2ar0_A M.ecoki, type I restric 34.2 15 0.0005 35.6 1.7 22 51-72 170-191 (541)
298 1wg8_A Predicted S-adenosylmet 32.3 29 0.001 31.1 3.2 20 51-70 23-42 (285)
299 3ps9_A TRNA 5-methylaminomethy 31.0 23 0.00078 34.7 2.5 23 49-71 65-87 (676)
300 2wk1_A NOVP; transferase, O-me 28.8 81 0.0028 27.8 5.5 20 50-69 106-125 (282)
301 1i4w_A Mitochondrial replicati 25.4 77 0.0026 28.9 4.9 42 51-97 59-114 (353)
302 1g60_A Adenine-specific methyl 25.2 36 0.0012 29.1 2.5 31 35-69 201-231 (260)
303 2v1n_A KIN17, protein KIN homo 23.0 53 0.0018 25.3 2.8 72 182-255 12-83 (111)
304 4hhu_A OR280; engineered prote 22.3 2.3E+02 0.0078 22.3 6.3 55 182-248 51-107 (170)
305 1v8d_A Hypothetical protein (T 22.0 1E+02 0.0034 26.7 4.5 51 32-82 43-102 (235)
306 2vz8_A Fatty acid synthase; tr 21.8 1.1E+02 0.0038 35.1 6.2 43 50-102 1240-1282(2512)
307 1m6y_A S-adenosyl-methyltransf 21.3 77 0.0026 28.0 3.9 30 191-220 218-247 (301)
308 1eg2_A Modification methylase 21.3 34 0.0012 30.6 1.6 20 199-218 87-106 (319)
309 4ham_A LMO2241 protein; struct 21.2 1.7E+02 0.0059 22.1 5.6 52 191-255 17-72 (134)
310 1nvp_D Transcription initiatio 21.0 49 0.0017 25.4 2.2 22 234-255 10-31 (108)
No 1
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=100.00 E-value=5.3e-83 Score=602.33 Aligned_cols=256 Identities=61% Similarity=1.010 Sum_probs=242.3
Q ss_pred CcccceeeccCCCCCchHHHhcHHHHHHHHHHHHHHHHHHHhhcccC-CCCceEEEeecCCCCcccHHHHHHHHHHHHHH
Q 024331 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCST-SPTKVAIADLGCSSGPNTLLVASELIKVVNKI 79 (269)
Q Consensus 1 ~~~~~~l~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~-~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~ 79 (269)
|+++++|||+||+|++||++||.+|++++..++|++++||++++... .+++++|||||||+|+||+.+++.||++|+++
T Consensus 1 m~~~~~~~m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~ 80 (359)
T 1m6e_X 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCcccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEecCCCCCcchHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999998765 67899999999999999999999999999999
Q ss_pred HHhcCC-CCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCceEEeecCCCccCCCCCCCceeeEeccccc
Q 024331 80 CDKLGS-QLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSL 158 (269)
Q Consensus 80 ~~~~~~-~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfP~~Svd~~~Ss~al 158 (269)
|.+.++ ++|+|||||||||+||||+||++|+.+. ++. ++||++|||||||+||||++|+|++||++||
T Consensus 81 ~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~----~~~-------~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aL 149 (359)
T 1m6e_X 81 RKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN----DVD-------GVCFINGVPGSFYGRLFPRNTLHFIHSSYSL 149 (359)
T ss_dssp HHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC----SCT-------TCEEEEEEESCSSSCCSCTTCBSCEEEESCT
T ss_pred HHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc----ccC-------CCEEEEecchhhhhccCCCCceEEEEehhhh
Confidence 987776 7899999999999999999999998753 110 3699999999999999999999999999999
Q ss_pred cccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccCCeEEEEecccCCCCCCChhhhHHHHHH
Q 024331 159 QWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELL 238 (269)
Q Consensus 159 HWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~g~~~~~~~~~~~~~~~~~l 238 (269)
||||++|+.+.+|||+||++++++++|.++|++||++||..||++|++||||||+|+++++|+.+.++.+++.+.+|+.|
T Consensus 150 HWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l 229 (359)
T 1m6e_X 150 MWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLL 229 (359)
T ss_dssp TBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHH
T ss_pred hhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888887777889999
Q ss_pred HHHHHHHHHccCcccccccceeccccccc
Q 024331 239 ATALNNMVSEVTKSFLLLIVFNQLNYKLK 267 (269)
Q Consensus 239 ~~~l~~mv~eG~i~~~~~d~FnlP~~~~~ 267 (269)
.++|++||.||+|++|++|+||+|.|.+.
T Consensus 230 ~~al~~mv~eGli~~ek~d~f~~P~y~ps 258 (359)
T 1m6e_X 230 AMALNQMVSEGLIEEEKMDKFNIPQYTPS 258 (359)
T ss_dssp HHHHHHHHHTTCSCCSTTGGGCCCCBCCC
T ss_pred HHHHHHHHHccccchhhhhccCCCccCCC
Confidence 99999999999999999999999999874
No 2
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=100.00 E-value=1.2e-80 Score=590.70 Aligned_cols=257 Identities=42% Similarity=0.746 Sum_probs=226.8
Q ss_pred CcccceeeccCCCCCchHHHhcHHHHHHHHHHHHHHHHHHHhhcccCCCC---ceEEEeecCCCCcccHHHHHHHHHHHH
Q 024331 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPT---KVAIADLGCSSGPNTLLVASELIKVVN 77 (269)
Q Consensus 1 ~~~~~~l~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~---~~~IaD~GCs~G~Ns~~~~~~ii~~i~ 77 (269)
|+++++|||+||+|++||++||. |++++..++|++++||++++....++ +++|||||||+|+||+.+++.||++|+
T Consensus 1 m~~~~~~~M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~ 79 (384)
T 2efj_A 1 MELQEVLHMNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLRANLPNINKCFKVGDLGCASGPNTFSTVRDIVQSID 79 (384)
T ss_dssp --CTTTCCCCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHHTTCTTTTTEEEEEEETCCSSHHHHHHHHHHHHHHT
T ss_pred CCcccccccCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhhcccCCcCCceEEEecCCCCCchHHHHHHHHHHHHH
Confidence 88999999999999999999999 99999999999999999998765566 899999999999999999999999999
Q ss_pred HHHHh--cCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCceEEeecCCCccCCCCCCCceeeEecc
Q 024331 78 KICDK--LGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSS 155 (269)
Q Consensus 78 ~~~~~--~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfP~~Svd~~~Ss 155 (269)
++|.. .+.++|+||||+||||+||||+||++||.+.+++.++.|..+ ++||++|||||||+|+||++|+|++||+
T Consensus 80 ~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~---~~~f~~gvpgSFy~rlfp~~S~d~v~Ss 156 (384)
T 2efj_A 80 KVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKI---GSCLIGAMPGSFYSRLFPEESMHFLHSC 156 (384)
T ss_dssp CC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCT---TSEEEEECCSCTTSCCSCTTCEEEEEEE
T ss_pred HHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCC---CceEEEecchhhhhccCCCCceEEEEec
Confidence 99865 455679999999999999999999999999988877666544 5899999999999999999999999999
Q ss_pred ccccccccCCCCCCC------CCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccCCeEEEEecccCCC--CCC
Q 024331 156 YSLQWLSQVPDGLES------NKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQ--DPS 227 (269)
Q Consensus 156 ~alHWLS~~P~~l~~------nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~g~~~~--~~~ 227 (269)
+||||||++|+.+.+ |||+||+++++|++|.++|++||++||..||++|++||||||+|+++++|+++. ++.
T Consensus 157 ~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~ 236 (384)
T 2efj_A 157 YCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPN 236 (384)
T ss_dssp SCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCC
T ss_pred ceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCcc
Confidence 999999999999887 999999999999999999999999999999999999999999999999999887 665
Q ss_pred ChhhhHHHHHHHHHHHHHHHccCcccccccceeccccccc
Q 024331 228 SKECCYIWELLATALNNMVSEVTKSFLLLIVFNQLNYKLK 267 (269)
Q Consensus 228 ~~~~~~~~~~l~~~l~~mv~eG~i~~~~~d~FnlP~~~~~ 267 (269)
++ +.+.++|++||.||+|+++++|+||+|.|.+.
T Consensus 237 ~~------~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps 270 (384)
T 2efj_A 237 SM------DLLEMSINDLVIEGHLEEEKLDSFNVPIYAPS 270 (384)
T ss_dssp HH------HHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCC
T ss_pred cH------HHHHHHHHHHHHhCCcchhhhcccCCcccCCC
Confidence 43 38999999999999999999999999999764
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=100.00 E-value=1.3e-78 Score=575.33 Aligned_cols=263 Identities=37% Similarity=0.607 Sum_probs=214.4
Q ss_pred CcccceeeccCCCCCchHHHhcHHHHHHHHHHHHHHHHHHHhhcccC--CCCceEEEeecCCCCcccHHHHHHHHHHHHH
Q 024331 1 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCST--SPTKVAIADLGCSSGPNTLLVASELIKVVNK 78 (269)
Q Consensus 1 ~~~~~~l~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~--~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~ 78 (269)
|+++++|||+||+|++||++||.+|++++..++|++++||+++.... .+++++|||||||+|+||+.+++.||++|++
T Consensus 1 m~~~~~~~m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~ 80 (374)
T 3b5i_A 1 MKLERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISK 80 (374)
T ss_dssp -------------------------CTTHHHHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHH
T ss_pred CCcccccCCCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999987654 4678999999999999999999999999999
Q ss_pred HHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHH---hcCCCCCCCCceEEeecCCCccCCCCCCCceeeEecc
Q 024331 79 ICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSS 155 (269)
Q Consensus 79 ~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~---~~~~~~~~~~~~f~~~vpgSFy~~lfP~~Svd~~~Ss 155 (269)
+|...+.++|++||++||||+||||+||++|+.+.+++.. ..+... ++||++|||||||+|+||++|+|++||+
T Consensus 81 ~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~---~~~f~~gvpgSFy~rlfP~~S~d~v~Ss 157 (374)
T 3b5i_A 81 RFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGN---RSYFVAGVPGSFYRRLFPARTIDFFHSA 157 (374)
T ss_dssp HHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCC---BCSEEEEEESCTTSCCSCTTCEEEEEEE
T ss_pred HHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCC---CceEEEecChhhhcccCCCcceEEEEec
Confidence 9988887889999999999999999999999976432211 011211 5799999999999999999999999999
Q ss_pred ccccccccCCCCCCC------CCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccCCeEEEEecccCCCCCCC-
Q 024331 156 YSLQWLSQVPDGLES------NKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSS- 228 (269)
Q Consensus 156 ~alHWLS~~P~~l~~------nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~g~~~~~~~~- 228 (269)
+||||||++|+.+.+ |||+||+++++++ |.++|++||++||..||++|++||||||+|+++++|+++.++.+
T Consensus 158 ~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~-v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~ 236 (374)
T 3b5i_A 158 FSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEK-TTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQ 236 (374)
T ss_dssp SCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCC
T ss_pred ceeeeeccCchhhhccccccccCCceEeCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccc
Confidence 999999999998875 9999999999988 99999999999999999999999999999999999998877766
Q ss_pred hhhhHHH-HHHHHHHHHHHHccCcccccccceeccccccc
Q 024331 229 KECCYIW-ELLATALNNMVSEVTKSFLLLIVFNQLNYKLK 267 (269)
Q Consensus 229 ~~~~~~~-~~l~~~l~~mv~eG~i~~~~~d~FnlP~~~~~ 267 (269)
.+.+.+| +.|.++|++|+.||+|+++++|+||+|.|.+.
T Consensus 237 ~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps 276 (374)
T 3b5i_A 237 GGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPS 276 (374)
T ss_dssp HHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCC
T ss_pred cchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCC
Confidence 4456789 99999999999999999999999999999864
No 4
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.02 E-value=1.9e-09 Score=94.87 Aligned_cols=151 Identities=19% Similarity=0.181 Sum_probs=98.7
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
+...+|+|+|||+|..++.++ +. +..+|+..|+... .+....+... ..+... .
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la--------~~--------~~~~v~gvD~s~~-------~~~~a~~~~~-~~~~~~---~ 97 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLA--------GH--------VTGQVTGLDFLSG-------FIDIFNRNAR-QSGLQN---R 97 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHH--------TT--------CSSEEEEEESCHH-------HHHHHHHHHH-HTTCTT---T
T ss_pred CCCCEEEEeCCCCCHHHHHHH--------hc--------cCCEEEEEeCCHH-------HHHHHHHHHH-HcCCCc---C
Confidence 456899999999999888776 32 4579999998654 0111111111 112110 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
--|+ .+++....+|++++|+++|..++|++ . +..+|+.=.+-|
T Consensus 98 v~~~---~~d~~~~~~~~~~fD~i~~~~~~~~~-~---------------------------------~~~~l~~~~~~L 140 (267)
T 3kkz_A 98 VTGI---VGSMDDLPFRNEELDLIWSEGAIYNI-G---------------------------------FERGLNEWRKYL 140 (267)
T ss_dssp EEEE---ECCTTSCCCCTTCEEEEEESSCGGGT-C---------------------------------HHHHHHHHGGGE
T ss_pred cEEE---EcChhhCCCCCCCEEEEEEcCCceec-C---------------------------------HHHHHHHHHHHc
Confidence 2333 37888888999999999999999985 1 112333336778
Q ss_pred ccCCeEEEEecccCCCCCCChhhhHHHH-------HHHHHHHHHHHccCcccccccceeccccccc
Q 024331 209 VAEGRMVLTFLGRKSQDPSSKECCYIWE-------LLATALNNMVSEVTKSFLLLIVFNQLNYKLK 267 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~~~~~~~~~~~~~~-------~l~~~l~~mv~eG~i~~~~~d~FnlP~~~~~ 267 (269)
+|||+++++.+.+....+.. ....+|. ......+-|.+.|+ +.++.+.+|.-.|.
T Consensus 141 kpgG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~aGf---~~v~~~~~~~~~w~ 202 (267)
T 3kkz_A 141 KKGGYLAVSECSWFTDERPA-EINDFWMDAYPEIDTIPNQVAKIHKAGY---LPVATFILPENCWT 202 (267)
T ss_dssp EEEEEEEEEEEEESSSCCCH-HHHHHHHHHCTTCEEHHHHHHHHHHTTE---EEEEEEECCGGGTT
T ss_pred CCCCEEEEEEeeecCCCChH-HHHHHHHHhCCCCCCHHHHHHHHHHCCC---EEEEEEECCHhHHH
Confidence 89999999998765443322 2223331 24566677788998 77788899988884
No 5
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.01 E-value=1.9e-09 Score=93.61 Aligned_cols=150 Identities=19% Similarity=0.166 Sum_probs=96.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ ++. + .+|+..|+... . +....+... ..+... +-
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~--------~~~-------~-~~v~~vD~s~~-~------~~~a~~~~~-~~~~~~---~~ 98 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLA--------DYV-------K-GQITGIDLFPD-F------IEIFNENAV-KANCAD---RV 98 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHC-------C-SEEEEEESCHH-H------HHHHHHHHH-HTTCTT---TE
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HhC-------C-CeEEEEECCHH-H------HHHHHHHHH-HcCCCC---ce
Confidence 45799999999999988777 542 3 38999997654 0 111111111 112110 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.++ .+++....+|++++|++++..++||+ . | + .+|+.=.+-|+
T Consensus 99 ~~~---~~d~~~~~~~~~~fD~v~~~~~l~~~-~-~-----------------~---------------~~l~~~~~~L~ 141 (257)
T 3f4k_A 99 KGI---TGSMDNLPFQNEELDLIWSEGAIYNI-G-F-----------------E---------------RGMNEWSKYLK 141 (257)
T ss_dssp EEE---ECCTTSCSSCTTCEEEEEEESCSCCC-C-H-----------------H---------------HHHHHHHTTEE
T ss_pred EEE---ECChhhCCCCCCCEEEEEecChHhhc-C-H-----------------H---------------HHHHHHHHHcC
Confidence 333 48888888999999999999999995 1 0 1 12222256788
Q ss_pred cCCeEEEEecccCCCCCCChhhhHHHH-------HHHHHHHHHHHccCcccccccceeccccccc
Q 024331 210 AEGRMVLTFLGRKSQDPSSKECCYIWE-------LLATALNNMVSEVTKSFLLLIVFNQLNYKLK 267 (269)
Q Consensus 210 pGG~lv~~~~g~~~~~~~~~~~~~~~~-------~l~~~l~~mv~eG~i~~~~~d~FnlP~~~~~ 267 (269)
|||+++++.+.+....+.. ....+|. .......-|.+.|+ +.++.+.+|...|.
T Consensus 142 pgG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~aGf---~~v~~~~~~~~~w~ 202 (257)
T 3f4k_A 142 KGGFIAVSEASWFTSERPA-EIEDFWMDAYPEISVIPTCIDKMERAGY---TPTAHFILPENCWT 202 (257)
T ss_dssp EEEEEEEEEEEESSSCCCH-HHHHHHHHHCTTCCBHHHHHHHHHHTTE---EEEEEEECCGGGTC
T ss_pred CCcEEEEEEeeccCCCChH-HHHHHHHHhCCCCCCHHHHHHHHHHCCC---eEEEEEECChhhHH
Confidence 9999999998765443222 2222332 24556667788898 77778999988884
No 6
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.00 E-value=5.4e-09 Score=89.71 Aligned_cols=111 Identities=17% Similarity=0.192 Sum_probs=74.4
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
.++.+|+|+|||+|..+..++ +++ |..+|+..|+... +. +..+++... . +
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~--------~~~-------~~~~v~~vD~s~~----------~~-~~a~~~~~~-~---~ 92 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLM--------EKY-------PEATFTLVDMSEK----------ML-EIAKNRFRG-N---L 92 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEESCHH----------HH-HHHHHHTCS-C---T
T ss_pred CCCCeEEEecCCCCHHHHHHH--------HhC-------CCCeEEEEECCHH----------HH-HHHHHhhcc-C---C
Confidence 456899999999999988777 542 5689999998654 21 223322211 1 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
-+..+.+++....++ +++|+++++.++||++. .+...+|+.=.+-|
T Consensus 93 --~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L 138 (234)
T 3dtn_A 93 --KVKYIEADYSKYDFE-EKYDMVVSALSIHHLED-------------------------------EDKKELYKRSYSIL 138 (234)
T ss_dssp --TEEEEESCTTTCCCC-SCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred --CEEEEeCchhccCCC-CCceEEEEeCccccCCH-------------------------------HHHHHHHHHHHHhc
Confidence 122234888888888 99999999999999632 11122333335667
Q ss_pred ccCCeEEEEecccCC
Q 024331 209 VAEGRMVLTFLGRKS 223 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~ 223 (269)
+|||+++++.....+
T Consensus 139 kpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 139 KESGIFINADLVHGE 153 (234)
T ss_dssp EEEEEEEEEEECBCS
T ss_pred CCCcEEEEEEecCCC
Confidence 799999999876643
No 7
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.94 E-value=1.1e-09 Score=97.89 Aligned_cols=102 Identities=16% Similarity=0.174 Sum_probs=70.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
..-+|+|+|||+|..+..+. ++ -.+|+..|+... ++. ..... . +-
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~--------~~---------~~~v~gvD~s~~----------ml~----~a~~~-~---~v 83 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLA--------EF---------FERVHAVDPGEA----------QIR----QALRH-P---RV 83 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHH--------TT---------CSEEEEEESCHH----------HHH----TCCCC-T---TE
T ss_pred CCCCEEEEcCCCCHHHHHHH--------Hh---------CCEEEEEeCcHH----------hhh----hhhhc-C---Cc
Confidence 34689999999999988776 33 257899997654 321 11111 0 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.|+. +++....||++|+|+++++.++||+.. +. ||+.=+|.||
T Consensus 84 ~~~~---~~~e~~~~~~~sfD~v~~~~~~h~~~~-------------------~~---------------~~~e~~rvLk 126 (257)
T 4hg2_A 84 TYAV---APAEDTGLPPASVDVAIAAQAMHWFDL-------------------DR---------------FWAELRRVAR 126 (257)
T ss_dssp EEEE---CCTTCCCCCSSCEEEEEECSCCTTCCH-------------------HH---------------HHHHHHHHEE
T ss_pred eeeh---hhhhhhcccCCcccEEEEeeehhHhhH-------------------HH---------------HHHHHHHHcC
Confidence 3433 788999999999999999999999521 11 1111256788
Q ss_pred cCCeEEEEecccCC
Q 024331 210 AEGRMVLTFLGRKS 223 (269)
Q Consensus 210 pGG~lv~~~~g~~~ 223 (269)
|||+|++...+...
T Consensus 127 pgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 127 PGAVFAAVTYGLTR 140 (257)
T ss_dssp EEEEEEEEEECCCB
T ss_pred CCCEEEEEECCCCC
Confidence 99999998877654
No 8
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.90 E-value=1.2e-09 Score=94.85 Aligned_cols=128 Identities=13% Similarity=0.134 Sum_probs=84.9
Q ss_pred CchHHHhcHHHHHHHHHHHHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEe
Q 024331 15 GTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFL 94 (269)
Q Consensus 15 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~ 94 (269)
...|++.+..|......++ ..+ ....+.+|+|+|||+|..+..+. +++ |..+|+.
T Consensus 8 ~~~y~~~~~~~~~~~~~l~-------~~~---~~~~~~~vLdiG~G~G~~~~~l~--------~~~-------~~~~v~~ 62 (259)
T 2p35_A 8 AQQYLKFEDERTRPARDLL-------AQV---PLERVLNGYDLGCGPGNSTELLT--------DRY-------GVNVITG 62 (259)
T ss_dssp CGGGBCCCCGGGHHHHHHH-------TTC---CCSCCSSEEEETCTTTHHHHHHH--------HHH-------CTTSEEE
T ss_pred HHHHHHHHHHHHHHHHHHH-------Hhc---CCCCCCEEEEecCcCCHHHHHHH--------HhC-------CCCEEEE
Confidence 4578887777766554321 111 12345799999999999988776 443 4578999
Q ss_pred cCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcc
Q 024331 95 NDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGN 174 (269)
Q Consensus 95 nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~ 174 (269)
.|+... +. +..+++ .. .-.|+. +++...+ |++++|+++|+.++||+.+
T Consensus 63 ~D~s~~----------~~-~~a~~~-~~-----~~~~~~---~d~~~~~-~~~~fD~v~~~~~l~~~~~----------- 110 (259)
T 2p35_A 63 IDSDDD----------ML-EKAADR-LP-----NTNFGK---ADLATWK-PAQKADLLYANAVFQWVPD----------- 110 (259)
T ss_dssp EESCHH----------HH-HHHHHH-ST-----TSEEEE---CCTTTCC-CSSCEEEEEEESCGGGSTT-----------
T ss_pred EECCHH----------HH-HHHHHh-CC-----CcEEEE---CChhhcC-ccCCcCEEEEeCchhhCCC-----------
Confidence 997654 21 112222 11 123444 6777766 8899999999999999632
Q ss_pred eEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccCCeEEEEeccc
Q 024331 175 IFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGR 221 (269)
Q Consensus 175 i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~g~ 221 (269)
...+|+.=.+-|+|||+++++.++.
T Consensus 111 ----------------------~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 111 ----------------------HLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp ----------------------HHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred ----------------------HHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 2234444478899999999998654
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.90 E-value=4.5e-09 Score=93.95 Aligned_cols=111 Identities=18% Similarity=0.231 Sum_probs=72.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (269)
...+|+|+|||+|..++.++ +++ ..|.++|+..|+... ++ +..+++. ..+. ..
T Consensus 70 ~~~~vLDlGcGtG~~~~~la--------~~~-----~~~~~~v~gvD~s~~----------ml-~~A~~~~~~~~~--~~ 123 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVR--------RNI-----HHDNCKIIAIDNSPA----------MI-ERCRRHIDAYKA--PT 123 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHH--------HTC-----CSSSCEEEEEESCHH----------HH-HHHHHHHHTSCC--SS
T ss_pred CCCEEEEEeCCCCHHHHHHH--------Hhc-----CCCCCEEEEEECCHH----------HH-HHHHHHHHhhcc--Cc
Confidence 45799999999999988776 543 346789999998765 32 2233221 1111 01
Q ss_pred ce-EEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 129 QC-FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 129 ~~-f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
++ |+. +++.+..+ .+.|+++|+++|||++. .|...+|+.=.+-
T Consensus 124 ~v~~~~---~D~~~~~~--~~~d~v~~~~~l~~~~~-------------------------------~~~~~~l~~i~~~ 167 (261)
T 4gek_A 124 PVDVIE---GDIRDIAI--ENASMVVLNFTLQFLEP-------------------------------SERQALLDKIYQG 167 (261)
T ss_dssp CEEEEE---SCTTTCCC--CSEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHH
T ss_pred eEEEee---cccccccc--cccccceeeeeeeecCc-------------------------------hhHhHHHHHHHHH
Confidence 22 433 78877555 56899999999999632 1222334433567
Q ss_pred hccCCeEEEEecccC
Q 024331 208 LVAEGRMVLTFLGRK 222 (269)
Q Consensus 208 L~pGG~lv~~~~g~~ 222 (269)
|+|||+|+++.....
T Consensus 168 LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 168 LNPGGALVLSEKFSF 182 (261)
T ss_dssp EEEEEEEEEEEEBCC
T ss_pred cCCCcEEEEEeccCC
Confidence 889999999876554
No 10
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.85 E-value=1.3e-08 Score=91.09 Aligned_cols=114 Identities=14% Similarity=0.158 Sum_probs=67.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcc--eEEecCCCCCchHHHHHhhHHHHHHHHHhc-C-CCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEF--QVFLNDLPGNDFNTIFRSLASFQKILRKQL-G-SASG 125 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~--qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~-~~~~ 125 (269)
...+|+|+|||+|..|+.+++. +..++ |.+ .++..|...+ ++. .++++. . .+.
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~----l~~~~-------~~~~v~~~~vD~S~~----------ml~-~a~~~~~~~~~~- 108 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSK----VQAQY-------PGVCINNEVVEPSAE----------QIA-KYKELVAKTSNL- 108 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHH----HHHHS-------TTCEEEEEEECSCHH----------HHH-HHHHHHHTCSSC-
T ss_pred CCCeEEEEcCCCCHHHHHHHHH----HHhhC-------CCceeeEEEEeCCHH----------HHH-HHHHHHHhccCC-
Confidence 4689999999999766655532 33332 345 4489997665 332 122221 1 111
Q ss_pred CCCceEEeecCCCccC------CCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHH
Q 024331 126 AAGQCFFTGVPGSFYG------RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSL 199 (269)
Q Consensus 126 ~~~~~f~~~vpgSFy~------~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 199 (269)
.++-+.-..++... +.|+++++|+++++.+|||+.+.+ .
T Consensus 109 --~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~---------------------------------~ 153 (292)
T 2aot_A 109 --ENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIP---------------------------------A 153 (292)
T ss_dssp --TTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHH---------------------------------H
T ss_pred --CcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHH---------------------------------H
Confidence 22322222344433 237899999999999999964421 1
Q ss_pred HHhhhhhhhccCCeEEEEeccc
Q 024331 200 FLKCRSEELVAEGRMVLTFLGR 221 (269)
Q Consensus 200 FL~~Ra~EL~pGG~lv~~~~g~ 221 (269)
+|+.=++-|||||+++++....
T Consensus 154 ~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 154 TLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp HHHHHHHTEEEEEEEEEEEECT
T ss_pred HHHHHHHHcCCCcEEEEEEecC
Confidence 2222256788999999987653
No 11
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.79 E-value=5.5e-08 Score=85.24 Aligned_cols=111 Identities=14% Similarity=0.089 Sum_probs=74.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ +++ ..+|+..|+... . +........ ..+.. .+
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~--------~~~--------~~~v~gvD~s~~-~------~~~a~~~~~-~~~~~----~~ 112 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLA--------TAR--------DVRVTGISISRP-Q------VNQANARAT-AAGLA----NR 112 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHS--------CCEEEEEESCHH-H------HHHHHHHHH-HTTCT----TT
T ss_pred CCCEEEEeCCCCCHHHHHHH--------Hhc--------CCEEEEEeCCHH-H------HHHHHHHHH-hcCCC----cc
Confidence 46799999999999988776 432 368899987654 0 111111111 11211 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
+..+.+++....||++++|+++|..++||+.+ ...+|+.=++.|+
T Consensus 113 --~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~L~ 157 (273)
T 3bus_A 113 --VTFSYADAMDLPFEDASFDAVWALESLHHMPD---------------------------------RGRALREMARVLR 157 (273)
T ss_dssp --EEEEECCTTSCCSCTTCEEEEEEESCTTTSSC---------------------------------HHHHHHHHHTTEE
T ss_pred --eEEEECccccCCCCCCCccEEEEechhhhCCC---------------------------------HHHHHHHHHHHcC
Confidence 22234888888899999999999999999632 1233444467888
Q ss_pred cCCeEEEEecccCC
Q 024331 210 AEGRMVLTFLGRKS 223 (269)
Q Consensus 210 pGG~lv~~~~g~~~ 223 (269)
|||+++++.+....
T Consensus 158 pgG~l~i~~~~~~~ 171 (273)
T 3bus_A 158 PGGTVAIADFVLLA 171 (273)
T ss_dssp EEEEEEEEEEEESS
T ss_pred CCeEEEEEEeeccC
Confidence 99999999887653
No 12
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.78 E-value=9.8e-09 Score=89.11 Aligned_cols=104 Identities=13% Similarity=0.171 Sum_probs=68.9
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
....+|+|+|||+|..+..++ ++ ..+|+..|+... +. +..+++..... .+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~~----------~~-~~a~~~~~~~~--~~ 87 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLI--------AR---------GYRYIALDADAA----------ML-EVFRQKIAGVD--RK 87 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHH--------TT---------TCEEEEEESCHH----------HH-HHHHHHTTTSC--TT
T ss_pred CCCCEEEEeCCcCCHHHHHHH--------HC---------CCEEEEEECCHH----------HH-HHHHHHhhccC--Cc
Confidence 346799999999999988776 22 257899987654 21 22222211101 01
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
-.| +.+++....+|++++|+++++.++||+.+ ...+|+.=.+-|
T Consensus 88 ~~~---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~L 131 (263)
T 2yqz_A 88 VQV---VQADARAIPLPDESVHGVIVVHLWHLVPD---------------------------------WPKVLAEAIRVL 131 (263)
T ss_dssp EEE---EESCTTSCCSCTTCEEEEEEESCGGGCTT---------------------------------HHHHHHHHHHHE
T ss_pred eEE---EEcccccCCCCCCCeeEEEECCchhhcCC---------------------------------HHHHHHHHHHHC
Confidence 133 34788888899999999999999999642 112233335677
Q ss_pred ccCCeEEEEe
Q 024331 209 VAEGRMVLTF 218 (269)
Q Consensus 209 ~pGG~lv~~~ 218 (269)
+|||++++++
T Consensus 132 ~pgG~l~~~~ 141 (263)
T 2yqz_A 132 KPGGALLEGW 141 (263)
T ss_dssp EEEEEEEEEE
T ss_pred CCCcEEEEEe
Confidence 8999999983
No 13
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.77 E-value=1.5e-08 Score=86.41 Aligned_cols=81 Identities=12% Similarity=0.162 Sum_probs=55.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCC------
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSA------ 123 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~------ 123 (269)
...+|+|+|||+|.++..++ ++ ..+|+..|+... ++. ..+++.+..
T Consensus 22 ~~~~vLD~GCG~G~~~~~la--------~~---------g~~V~gvD~S~~----------~l~-~a~~~~~~~~~~~~~ 73 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLS--------GQ---------GYHVVGAELSEA----------AVE-RYFTERGEQPHITSQ 73 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHH--------HH---------CCEEEEEEECHH----------HHH-HHHHHHCSCSEEEEE
T ss_pred CCCEEEEeCCCCcHhHHHHH--------HC---------CCeEEEEeCCHH----------HHH-HHHHHccCCcccccc
Confidence 46799999999999998777 43 268999998876 332 233322110
Q ss_pred -----CCCCCceEEeecCCCccCCCCCC-CceeeEecccccccc
Q 024331 124 -----SGAAGQCFFTGVPGSFYGRLFPR-NSVHLFHSSYSLQWL 161 (269)
Q Consensus 124 -----~~~~~~~f~~~vpgSFy~~lfP~-~Svd~~~Ss~alHWL 161 (269)
+...+--|+. +++....+++ +++|++++..++|++
T Consensus 74 ~~~~~~~~~~v~~~~---~d~~~l~~~~~~~fD~v~~~~~l~~l 114 (203)
T 1pjz_A 74 GDFKVYAAPGIEIWC---GDFFALTARDIGHCAAFYDRAAMIAL 114 (203)
T ss_dssp TTEEEEECSSSEEEE---ECCSSSTHHHHHSEEEEEEESCGGGS
T ss_pred cccccccCCccEEEE---CccccCCcccCCCEEEEEECcchhhC
Confidence 0000113444 7888888776 899999999999986
No 14
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.77 E-value=9e-08 Score=85.17 Aligned_cols=111 Identities=15% Similarity=0.067 Sum_probs=72.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ +++ ..+|+..|+... . +....+... ..+... .-
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~--------~~~--------~~~v~gvD~s~~-~------~~~a~~~~~-~~~~~~---~~ 134 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLV--------RKF--------GVSIDCLNIAPV-Q------NKRNEEYNN-QAGLAD---NI 134 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH--------CCEEEEEESCHH-H------HHHHHHHHH-HHTCTT---TE
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHh--------CCEEEEEeCCHH-H------HHHHHHHHH-hcCCCc---ce
Confidence 46799999999999988776 443 158899988654 1 111111111 112110 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.| +.+++...+||++++|++++..++|++.. ...+|+.=++-|+
T Consensus 135 ~~---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~Lk 178 (297)
T 2o57_A 135 TV---KYGSFLEIPCEDNSYDFIWSQDAFLHSPD---------------------------------KLKVFQECARVLK 178 (297)
T ss_dssp EE---EECCTTSCSSCTTCEEEEEEESCGGGCSC---------------------------------HHHHHHHHHHHEE
T ss_pred EE---EEcCcccCCCCCCCEeEEEecchhhhcCC---------------------------------HHHHHHHHHHHcC
Confidence 23 34788998999999999999999998643 1122233356778
Q ss_pred cCCeEEEEecccCC
Q 024331 210 AEGRMVLTFLGRKS 223 (269)
Q Consensus 210 pGG~lv~~~~g~~~ 223 (269)
|||+++++.+....
T Consensus 179 pgG~l~~~~~~~~~ 192 (297)
T 2o57_A 179 PRGVMAITDPMKED 192 (297)
T ss_dssp EEEEEEEEEEEECT
T ss_pred CCeEEEEEEeccCC
Confidence 99999999887654
No 15
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.76 E-value=4.3e-08 Score=82.22 Aligned_cols=81 Identities=16% Similarity=0.127 Sum_probs=53.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
+-+|+|+|||+|..+..+. ++ |..+|+..|+... .+......+.. .+... +-.
T Consensus 44 ~~~vLdiG~G~G~~~~~l~--------~~--------~~~~v~~~D~s~~-------~~~~a~~~~~~-~~~~~---~~~ 96 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALA--------KQ--------SDFSIRALDFSKH-------MNEIALKNIAD-ANLND---RIQ 96 (219)
T ss_dssp EEEEEEETCTTSHHHHHHH--------HH--------SEEEEEEEESCHH-------HHHHHHHHHHH-TTCTT---TEE
T ss_pred CCEEEEECCCCCHHHHHHH--------Hc--------CCCeEEEEECCHH-------HHHHHHHHHHh-ccccC---ceE
Confidence 3499999999999887776 33 4589999997543 01111111111 11110 113
Q ss_pred EEeecCCCccCCCCCCCceeeEecccccccc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWL 161 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWL 161 (269)
|+. +++....+|++++|+++++.++||+
T Consensus 97 ~~~---~d~~~~~~~~~~~D~v~~~~~l~~~ 124 (219)
T 3dlc_A 97 IVQ---GDVHNIPIEDNYADLIVSRGSVFFW 124 (219)
T ss_dssp EEE---CBTTBCSSCTTCEEEEEEESCGGGC
T ss_pred EEE---cCHHHCCCCcccccEEEECchHhhc
Confidence 333 7888888999999999999999996
No 16
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.75 E-value=8.6e-08 Score=86.45 Aligned_cols=118 Identities=15% Similarity=0.169 Sum_probs=71.1
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcC-CCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAA 127 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~-~~~~~~ 127 (269)
+++.+|+|+|||+|..+..+. +. +..+|+..|+... .+....+.+..... ..- .
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~--------~~--------~~~~v~gvD~s~~-------~l~~a~~~~~~~~~~~~~--~ 87 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWK--------KG--------RINKLVCTDIADV-------SVKQCQQRYEDMKNRRDS--E 87 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHH--------HT--------TCSEEEEEESCHH-------HHHHHHHHHHHHHSSSCC---
T ss_pred CCCCEEEEECCCCcHHHHHHH--------hc--------CCCEEEEEeCCHH-------HHHHHHHHHHHhhhcccc--c
Confidence 356799999999999987666 32 3468999998764 11111111111100 000 0
Q ss_pred CceEEeecCCCccCCC----CC--CCceeeEecccccccc-ccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHH
Q 024331 128 GQCFFTGVPGSFYGRL----FP--RNSVHLFHSSYSLQWL-SQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLF 200 (269)
Q Consensus 128 ~~~f~~~vpgSFy~~l----fP--~~Svd~~~Ss~alHWL-S~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 200 (269)
...-+..+.+++.... |+ ++++|+++|+.++||+ ... .|...+
T Consensus 88 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~------------------------------~~~~~~ 137 (313)
T 3bgv_A 88 YIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESY------------------------------EQADMM 137 (313)
T ss_dssp CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSH------------------------------HHHHHH
T ss_pred ccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCH------------------------------HHHHHH
Confidence 0011222336776654 64 4599999999999997 221 234455
Q ss_pred HhhhhhhhccCCeEEEEeccc
Q 024331 201 LKCRSEELVAEGRMVLTFLGR 221 (269)
Q Consensus 201 L~~Ra~EL~pGG~lv~~~~g~ 221 (269)
|+.=++-|+|||++++++++.
T Consensus 138 l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 138 LRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp HHHHHTTEEEEEEEEEEEECH
T ss_pred HHHHHHHhCCCcEEEEecCCh
Confidence 555577889999999998754
No 17
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.75 E-value=1.1e-07 Score=79.78 Aligned_cols=111 Identities=14% Similarity=0.119 Sum_probs=72.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++..+ .. +..+|+..|.... . +....+.... .+.. -
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~--------~~--------~~~~v~~vD~s~~-~------~~~a~~~~~~-~~~~-----~ 73 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIF--------VE--------DGYKTYGIEISDL-Q------LKKAENFSRE-NNFK-----L 73 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHH--------HH--------TTCEEEEEECCHH-H------HHHHHHHHHH-HTCC-----C
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh--------CCCEEEEEECCHH-H------HHHHHHHHHh-cCCc-----e
Confidence 45799999999999876554 22 2368999997654 0 1111111111 1211 1
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.++. +++....+|++++|+++++.++|+++. .|...+|+.=++-|+
T Consensus 74 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~Lk 119 (209)
T 2p8j_A 74 NISK---GDIRKLPFKDESMSFVYSYGTIFHMRK-------------------------------NDVKEAIDEIKRVLK 119 (209)
T ss_dssp CEEE---CCTTSCCSCTTCEEEEEECSCGGGSCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred EEEE---CchhhCCCCCCceeEEEEcChHHhCCH-------------------------------HHHHHHHHHHHHHcC
Confidence 3433 677777889999999999988888521 233444444466788
Q ss_pred cCCeEEEEecccCC
Q 024331 210 AEGRMVLTFLGRKS 223 (269)
Q Consensus 210 pGG~lv~~~~g~~~ 223 (269)
|||++++..+....
T Consensus 120 pgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 120 PGGLACINFLTTKD 133 (209)
T ss_dssp EEEEEEEEEEETTS
T ss_pred CCcEEEEEEecccc
Confidence 99999999987643
No 18
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.73 E-value=6.8e-08 Score=83.72 Aligned_cols=111 Identities=14% Similarity=0.179 Sum_probs=76.1
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
....+|+|+|||+|..+..++ +++ ..+|+..|+... +. +..+++..... .
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~--------~~~--------~~~v~~vD~s~~----------~~-~~a~~~~~~~~---~ 103 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYIN--------EKY--------GAHTHGIDICSN----------IV-NMANERVSGNN---K 103 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------HHH--------CCEEEEEESCHH----------HH-HHHHHTCCSCT---T
T ss_pred CCCCEEEEECCCCCHHHHHHH--------HHc--------CCEEEEEeCCHH----------HH-HHHHHHhhcCC---C
Confidence 346799999999999988777 443 268899997654 22 22332221100 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
-.|+ .+++....+|++++|++++..++|+++. .|...+|+.=.+-|
T Consensus 104 ~~~~---~~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L 149 (266)
T 3ujc_A 104 IIFE---ANDILTKEFPENNFDLIYSRDAILALSL-------------------------------ENKNKLFQKCYKWL 149 (266)
T ss_dssp EEEE---ECCTTTCCCCTTCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred eEEE---ECccccCCCCCCcEEEEeHHHHHHhcCh-------------------------------HHHHHHHHHHHHHc
Confidence 1333 3788888899999999999999999621 23344555556778
Q ss_pred ccCCeEEEEecccCC
Q 024331 209 VAEGRMVLTFLGRKS 223 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~ 223 (269)
+|||+++++.+....
T Consensus 150 ~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 150 KPTGTLLITDYCATE 164 (266)
T ss_dssp EEEEEEEEEEEEESC
T ss_pred CCCCEEEEEEeccCC
Confidence 899999999887654
No 19
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.72 E-value=1.2e-08 Score=88.37 Aligned_cols=103 Identities=14% Similarity=0.114 Sum_probs=69.2
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
++..+|+|+|||+|..+..+. ++ ..+|+..|+... +. +..++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~----------~~-~~a~~---------- 81 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCK--------EE---------GIESIGVDINED----------MI-KFCEG---------- 81 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHH--------HH---------TCCEEEECSCHH----------HH-HHHHT----------
T ss_pred cCCCeEEEEeCCCCHHHHHHH--------hC---------CCcEEEEECCHH----------HH-HHHHh----------
Confidence 346899999999999877655 32 256888887543 21 11221
Q ss_pred ceEEeecCCCccCC--CCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh
Q 024331 129 QCFFTGVPGSFYGR--LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (269)
Q Consensus 129 ~~f~~~vpgSFy~~--lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 206 (269)
. +..+.+++... .||++++|+++|+.++||+.. .|+..+|+.=.+
T Consensus 82 ~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~-------------------------------~~~~~~l~~~~~ 128 (240)
T 3dli_A 82 K--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP-------------------------------ERLFELLSLCYS 128 (240)
T ss_dssp T--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG-------------------------------GGHHHHHHHHHH
T ss_pred h--cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc-------------------------------HHHHHHHHHHHH
Confidence 1 12233566553 789999999999999999642 123344444467
Q ss_pred hhccCCeEEEEecccC
Q 024331 207 ELVAEGRMVLTFLGRK 222 (269)
Q Consensus 207 EL~pGG~lv~~~~g~~ 222 (269)
-|+|||++++..+...
T Consensus 129 ~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 129 KMKYSSYIVIESPNPT 144 (240)
T ss_dssp HBCTTCCEEEEEECTT
T ss_pred HcCCCcEEEEEeCCcc
Confidence 7889999999988654
No 20
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.72 E-value=8e-08 Score=85.14 Aligned_cols=144 Identities=13% Similarity=0.052 Sum_probs=91.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. +.. | |+-.||..|.... +.. .+++.... . ..-
T Consensus 77 pG~~VldlG~G~G~~~~~la--------~~V---G---~~G~V~avD~s~~----------~~~-~l~~~a~~-~--~ni 128 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMS--------DII---G---PRGRIYGVEFAPR----------VMR-DLLTVVRD-R--RNI 128 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH---C---TTCEEEEEECCHH----------HHH-HHHHHSTT-C--TTE
T ss_pred CCCEEEEecCcCCHHHHHHH--------HHh---C---CCceEEEEeCCHH----------HHH-HHHHhhHh-h--cCe
Confidence 45899999999999999887 543 1 6688999987654 222 23332211 1 012
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
..+.+..+......++.+++|++++..+.||- .+++.+.. .+-||
T Consensus 129 ~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~~----------------------------~~~~l~~~-------~r~LK 173 (233)
T 4df3_A 129 FPILGDARFPEKYRHLVEGVDGLYADVAQPEQ----------------------------AAIVVRNA-------RFFLR 173 (233)
T ss_dssp EEEESCTTCGGGGTTTCCCEEEEEECCCCTTH----------------------------HHHHHHHH-------HHHEE
T ss_pred eEEEEeccCccccccccceEEEEEEeccCChh----------------------------HHHHHHHH-------HHhcc
Confidence 56666677777778888999999986555540 11122333 34456
Q ss_pred cCCeEEEEecccCCC--CCCChhhhHHHHHHHHHHHHHHHccCcccccccceecccccc
Q 024331 210 AEGRMVLTFLGRKSQ--DPSSKECCYIWELLATALNNMVSEVTKSFLLLIVFNQLNYKL 266 (269)
Q Consensus 210 pGG~lv~~~~g~~~~--~~~~~~~~~~~~~l~~~l~~mv~eG~i~~~~~d~FnlP~~~~ 266 (269)
|||++++++-.+..+ .+.. ..+++..+.|.+.|+ +.++..+|.-|.|
T Consensus 174 pGG~lvI~ik~r~~d~~~p~~-------~~~~~ev~~L~~~GF---~l~e~i~L~pf~~ 222 (233)
T 4df3_A 174 DGGYMLMAIKARSIDVTTEPS-------EVYKREIKTLMDGGL---EIKDVVHLDPFDR 222 (233)
T ss_dssp EEEEEEEEEECCHHHHHTCCC-------HHHHHHHHHHHHTTC---CEEEEEECTTTST
T ss_pred CCCEEEEEEecccCCCCCChH-------HHHHHHHHHHHHCCC---EEEEEEccCCCCC
Confidence 999999987655421 1111 345778889999999 5455555655554
No 21
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.72 E-value=5.2e-08 Score=85.10 Aligned_cols=108 Identities=15% Similarity=0.164 Sum_probs=68.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. ++. .+|+..|+... . +....+... +.+.. .-
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~--------~~~---------~~v~gvD~s~~-~------l~~a~~~~~-~~~~~----~v 87 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFA--------PFV---------KKVVAFDLTED-I------LKVARAFIE-GNGHQ----QV 87 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHG--------GGS---------SEEEEEESCHH-H------HHHHHHHHH-HTTCC----SE
T ss_pred CCCEEEEEeCCCCHHHHHHH--------HhC---------CEEEEEeCCHH-H------HHHHHHHHH-hcCCC----ce
Confidence 46799999999999877665 321 28899997653 1 111111111 11210 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.| +.+++....||++++|+++|+.++||+.+.+ .+|+.=.+-|+
T Consensus 88 ~~---~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~---------------------------------~~l~~~~r~Lk 131 (260)
T 1vl5_A 88 EY---VQGDAEQMPFTDERFHIVTCRIAAHHFPNPA---------------------------------SFVSEAYRVLK 131 (260)
T ss_dssp EE---EECCC-CCCSCTTCEEEEEEESCGGGCSCHH---------------------------------HHHHHHHHHEE
T ss_pred EE---EEecHHhCCCCCCCEEEEEEhhhhHhcCCHH---------------------------------HHHHHHHHHcC
Confidence 33 3478888899999999999999999974311 12222256677
Q ss_pred cCCeEEEEecccC
Q 024331 210 AEGRMVLTFLGRK 222 (269)
Q Consensus 210 pGG~lv~~~~g~~ 222 (269)
|||+++++.....
T Consensus 132 pgG~l~~~~~~~~ 144 (260)
T 1vl5_A 132 KGGQLLLVDNSAP 144 (260)
T ss_dssp EEEEEEEEEEEBC
T ss_pred CCCEEEEEEcCCC
Confidence 9999999866543
No 22
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.71 E-value=1.6e-07 Score=81.35 Aligned_cols=110 Identities=15% Similarity=0.045 Sum_probs=69.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ +++ ..+|+..|+... + +....+... ..+.. .+
T Consensus 36 ~~~~VLDiGcG~G~~~~~la--------~~~--------~~~v~gvD~s~~-~------l~~a~~~~~-~~~~~----~~ 87 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWA--------RDH--------GITGTGIDMSSL-F------TAQAKRRAE-ELGVS----ER 87 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HHT--------CCEEEEEESCHH-H------HHHHHHHHH-HTTCT----TT
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hhc--------CCeEEEEeCCHH-H------HHHHHHHHH-hcCCC----cc
Confidence 45799999999999888776 442 257888887653 1 111111111 11211 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
+ ..+.+++...++ ++++|+++|..++|++.. +..+.+.. ++-|+
T Consensus 88 v--~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~------------------~~~~l~~~---------------~r~Lk 131 (256)
T 1nkv_A 88 V--HFIHNDAAGYVA-NEKCDVAACVGATWIAGG------------------FAGAEELL---------------AQSLK 131 (256)
T ss_dssp E--EEEESCCTTCCC-SSCEEEEEEESCGGGTSS------------------SHHHHHHH---------------TTSEE
T ss_pred e--EEEECChHhCCc-CCCCCEEEECCChHhcCC------------------HHHHHHHH---------------HHHcC
Confidence 2 223478888776 899999999999998643 11222222 67788
Q ss_pred cCCeEEEEecccCC
Q 024331 210 AEGRMVLTFLGRKS 223 (269)
Q Consensus 210 pGG~lv~~~~g~~~ 223 (269)
|||+++++...+..
T Consensus 132 pgG~l~~~~~~~~~ 145 (256)
T 1nkv_A 132 PGGIMLIGEPYWRQ 145 (256)
T ss_dssp EEEEEEEEEEEETT
T ss_pred CCeEEEEecCcccC
Confidence 99999998876543
No 23
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.71 E-value=1e-07 Score=80.71 Aligned_cols=137 Identities=13% Similarity=0.102 Sum_probs=82.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ ++. .|..+|+..|+... .+......+.. .+.. .-
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~--------~~~------~~~~~v~~vD~s~~-------~~~~a~~~~~~-~~~~----~~ 90 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLS--------KMV------GEKGKVYAIDVQEE-------MVNYAWEKVNK-LGLK----NV 90 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHH--------HHH------TTTCEEEEEESCHH-------HHHHHHHHHHH-HTCT----TE
T ss_pred CCCEEEEEecCCCHHHHHHH--------HHh------CCCcEEEEEECCHH-------HHHHHHHHHHH-cCCC----cE
Confidence 45799999999999998877 443 25679999997554 01111111111 1210 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.|+ .+++....++++++|+++++.++||+.+ + ..+|+.=.+-|+
T Consensus 91 ~~~---~~d~~~~~~~~~~fD~v~~~~~l~~~~~------------------~---------------~~~l~~~~~~Lk 134 (219)
T 3dh0_A 91 EVL---KSEENKIPLPDNTVDFIFMAFTFHELSE------------------P---------------LKFLEELKRVAK 134 (219)
T ss_dssp EEE---ECBTTBCSSCSSCEEEEEEESCGGGCSS------------------H---------------HHHHHHHHHHEE
T ss_pred EEE---ecccccCCCCCCCeeEEEeehhhhhcCC------------------H---------------HHHHHHHHHHhC
Confidence 333 3788888899999999999999999632 1 122222245677
Q ss_pred cCCeEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHHccC
Q 024331 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEVT 250 (269)
Q Consensus 210 pGG~lv~~~~g~~~~~~~~~~~~~~~~~l~~~l~~mv~eG~ 250 (269)
|||.++++............ ....+ ......+.|.+.|+
T Consensus 135 pgG~l~i~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~~Gf 173 (219)
T 3dh0_A 135 PFAYLAIIDWKKEERDKGPP-PEEVY-SEWEVGLILEDAGI 173 (219)
T ss_dssp EEEEEEEEEECSSCCSSSCC-GGGSC-CHHHHHHHHHHTTC
T ss_pred CCeEEEEEEecccccccCCc-hhccc-CHHHHHHHHHHCCC
Confidence 99999999876654311111 11111 23444455566787
No 24
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.71 E-value=5.6e-08 Score=86.15 Aligned_cols=108 Identities=19% Similarity=0.269 Sum_probs=70.3
Q ss_pred CCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCC
Q 024331 48 SPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGA 126 (269)
Q Consensus 48 ~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~ 126 (269)
.+++.+|+|+|||+|..+..++ +. ..+|+..|+... +. +..++.. ..+.
T Consensus 66 ~~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~----------~~-~~a~~~~~~~~~-- 115 (285)
T 4htf_A 66 GPQKLRVLDAGGGEGQTAIKMA--------ER---------GHQVILCDLSAQ----------MI-DRAKQAAEAKGV-- 115 (285)
T ss_dssp CSSCCEEEEETCTTCHHHHHHH--------HT---------TCEEEEEESCHH----------HH-HHHHHHHHC-CC--
T ss_pred CCCCCEEEEeCCcchHHHHHHH--------HC---------CCEEEEEECCHH----------HH-HHHHHHHHhcCC--
Confidence 3346899999999999887766 32 268999998654 11 1122111 1111
Q ss_pred CCc-eEEeecCCCccCCC-CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 024331 127 AGQ-CFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (269)
Q Consensus 127 ~~~-~f~~~vpgSFy~~l-fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 204 (269)
..+ .|+. +++.... ++++++|++++..++||+.+. ..+|+.=
T Consensus 116 ~~~v~~~~---~d~~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------~~~l~~~ 159 (285)
T 4htf_A 116 SDNMQFIH---CAAQDVASHLETPVDLILFHAVLEWVADP---------------------------------RSVLQTL 159 (285)
T ss_dssp GGGEEEEE---SCGGGTGGGCSSCEEEEEEESCGGGCSCH---------------------------------HHHHHHH
T ss_pred CcceEEEE---cCHHHhhhhcCCCceEEEECchhhcccCH---------------------------------HHHHHHH
Confidence 011 2333 7887777 899999999999999996321 1223333
Q ss_pred hhhhccCCeEEEEeccc
Q 024331 205 SEELVAEGRMVLTFLGR 221 (269)
Q Consensus 205 a~EL~pGG~lv~~~~g~ 221 (269)
++-|+|||++++.....
T Consensus 160 ~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 160 WSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp HHTEEEEEEEEEEEEBH
T ss_pred HHHcCCCeEEEEEEeCC
Confidence 56788999999998754
No 25
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.70 E-value=8.6e-08 Score=86.53 Aligned_cols=110 Identities=15% Similarity=0.080 Sum_probs=72.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ +++ ..+|+..|+... .+....+... +.+... .-
T Consensus 117 ~~~~vLDiGcG~G~~~~~la--------~~~--------~~~v~gvD~s~~-------~~~~a~~~~~-~~~~~~---~v 169 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAH--------RRF--------GSRVEGVTLSAA-------QADFGNRRAR-ELRIDD---HV 169 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH--------CCEEEEEESCHH-------HHHHHHHHHH-HTTCTT---TE
T ss_pred CCCEEEEecCCCCHHHHHHH--------HHc--------CCEEEEEeCCHH-------HHHHHHHHHH-HcCCCC---ce
Confidence 46799999999999988777 442 267889987554 0111111111 112110 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.|+. +++....||++++|++++..++||+. + ..+|+.=.+-|+
T Consensus 170 ~~~~---~d~~~~~~~~~~fD~V~~~~~l~~~~--~--------------------------------~~~l~~~~~~Lk 212 (312)
T 3vc1_A 170 RSRV---CNMLDTPFDKGAVTASWNNESTMYVD--L--------------------------------HDLFSEHSRFLK 212 (312)
T ss_dssp EEEE---CCTTSCCCCTTCEEEEEEESCGGGSC--H--------------------------------HHHHHHHHHHEE
T ss_pred EEEE---CChhcCCCCCCCEeEEEECCchhhCC--H--------------------------------HHHHHHHHHHcC
Confidence 3433 88888889999999999999999962 1 112222256678
Q ss_pred cCCeEEEEecccCC
Q 024331 210 AEGRMVLTFLGRKS 223 (269)
Q Consensus 210 pGG~lv~~~~g~~~ 223 (269)
|||++++.......
T Consensus 213 pgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 213 VGGRYVTITGCWNP 226 (312)
T ss_dssp EEEEEEEEEEEECT
T ss_pred CCcEEEEEEccccc
Confidence 99999999877664
No 26
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.70 E-value=8.1e-08 Score=80.80 Aligned_cols=105 Identities=11% Similarity=0.094 Sum_probs=70.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. ++ ..+|+..|+... +. +..++ .+.. .-
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~~D~s~~----------~~-~~a~~-~~~~----~~ 92 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLS--------GL---------ADRVTALDGSAE----------MI-AEAGR-HGLD----NV 92 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHH--------HH---------SSEEEEEESCHH----------HH-HHHGG-GCCT----TE
T ss_pred CCCeEEEECCCCCHHHHHHH--------hc---------CCeEEEEeCCHH----------HH-HHHHh-cCCC----Ce
Confidence 34699999999999888776 33 257888887543 21 11222 2210 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.|+. +++... +|++++|+++++.++|++.. .++..+|+.=.+-|+
T Consensus 93 ~~~~---~d~~~~-~~~~~~D~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L~ 137 (218)
T 3ou2_A 93 EFRQ---QDLFDW-TPDRQWDAVFFAHWLAHVPD-------------------------------DRFEAFWESVRSAVA 137 (218)
T ss_dssp EEEE---CCTTSC-CCSSCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred EEEe---cccccC-CCCCceeEEEEechhhcCCH-------------------------------HHHHHHHHHHHHHcC
Confidence 3333 777766 89999999999999999532 122334444456778
Q ss_pred cCCeEEEEecccC
Q 024331 210 AEGRMVLTFLGRK 222 (269)
Q Consensus 210 pGG~lv~~~~g~~ 222 (269)
|||.++++...+.
T Consensus 138 pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 138 PGGVVEFVDVTDH 150 (218)
T ss_dssp EEEEEEEEEECCC
T ss_pred CCeEEEEEeCCCC
Confidence 9999999988763
No 27
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.66 E-value=1.3e-08 Score=90.18 Aligned_cols=127 Identities=18% Similarity=0.193 Sum_probs=73.6
Q ss_pred CchHHHhcHHHHHHHHHHHHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEe
Q 024331 15 GTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFL 94 (269)
Q Consensus 15 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~ 94 (269)
+..|.++...|......+...+ ......+|+|+|||+|..+..++ + +..+|+.
T Consensus 32 a~~y~~~~~~~~~~~~~l~~~l----------~~~~~~~vLDiGcG~G~~~~~l~--------~---------~~~~v~g 84 (279)
T 3ccf_A 32 ATLYQDKHSFVWQYGEDLLQLL----------NPQPGEFILDLGCGTGQLTEKIA--------Q---------SGAEVLG 84 (279)
T ss_dssp ---------CCSSSCCHHHHHH----------CCCTTCEEEEETCTTSHHHHHHH--------H---------TTCEEEE
T ss_pred HHHHhhcchHHHHHHHHHHHHh----------CCCCCCEEEEecCCCCHHHHHHH--------h---------CCCeEEE
Confidence 4567766655543333322211 12245799999999999888766 2 2478999
Q ss_pred cCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcc
Q 024331 95 NDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGN 174 (269)
Q Consensus 95 nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~ 174 (269)
.|+... +. +..+++. . +-.|+. +++....+ ++++|+++++.++||+.+
T Consensus 85 vD~s~~----------~~-~~a~~~~-~-----~~~~~~---~d~~~~~~-~~~fD~v~~~~~l~~~~d----------- 132 (279)
T 3ccf_A 85 TDNAAT----------MI-EKARQNY-P-----HLHFDV---ADARNFRV-DKPLDAVFSNAMLHWVKE----------- 132 (279)
T ss_dssp EESCHH----------HH-HHHHHHC-T-----TSCEEE---CCTTTCCC-SSCEEEEEEESCGGGCSC-----------
T ss_pred EECCHH----------HH-HHHHhhC-C-----CCEEEE---CChhhCCc-CCCcCEEEEcchhhhCcC-----------
Confidence 997543 21 1122221 1 123444 67777665 589999999999999642
Q ss_pred eEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccCCeEEEEecccC
Q 024331 175 IFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRK 222 (269)
Q Consensus 175 i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~g~~ 222 (269)
...+|+.=++.|+|||++++.+.+..
T Consensus 133 ----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 133 ----------------------PEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp ----------------------HHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred ----------------------HHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 11223333567889999999887654
No 28
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.65 E-value=1.1e-07 Score=80.69 Aligned_cols=113 Identities=15% Similarity=0.014 Sum_probs=70.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcC-CCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~ 128 (269)
+..+|+|+|||+|..+..+. ++. |..+|+..|+... +. +..+++.. .++....
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~--------~~~-------~~~~v~gvD~s~~----------~~-~~a~~~~~~~~~~~~~ 82 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILL--------KDS-------FFEQITGVDVSYR----------SL-EIAQERLDRLRLPRNQ 82 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHH--------HCT-------TCSEEEEEESCHH----------HH-HHHHHHHTTCCCCHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH--------hhC-------CCCEEEEEECCHH----------HH-HHHHHHHHHhcCCccc
Confidence 35799999999999888766 432 4579999998654 21 11222111 1110000
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
..-+..+-+++....++.+++|+++++.++||+.. .++..+|+.=.+-|
T Consensus 83 ~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L 131 (217)
T 3jwh_A 83 WERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDL-------------------------------SRLGAFERVLFEFA 131 (217)
T ss_dssp HTTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCH-------------------------------HHHHHHHHHHHTTT
T ss_pred CcceEEEeCCcccccccCCCcCEEeeHHHHHcCCH-------------------------------HHHHHHHHHHHHHc
Confidence 00122233677777778899999999999999622 23445566557788
Q ss_pred ccCCeEEEEec
Q 024331 209 VAEGRMVLTFL 219 (269)
Q Consensus 209 ~pGG~lv~~~~ 219 (269)
+|||+++++..
T Consensus 132 kpgG~li~~~~ 142 (217)
T 3jwh_A 132 QPKIVIVTTPN 142 (217)
T ss_dssp CCSEEEEEEEB
T ss_pred CCCEEEEEccC
Confidence 99997776654
No 29
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.65 E-value=7.5e-08 Score=83.59 Aligned_cols=104 Identities=17% Similarity=0.264 Sum_probs=69.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..+..++ ++. +. +|+..|+... +. +..++.... . .-
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~--------~~~-------~~-~v~~vD~s~~----------~~-~~a~~~~~~-~---~~ 92 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAA--------EHG-------AK-KVLGIDLSER----------ML-TEAKRKTTS-P---VV 92 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HTT-------CS-EEEEEESCHH----------HH-HHHHHHCCC-T---TE
T ss_pred CCCEEEEECCCCCHHHHHHH--------HcC-------CC-EEEEEECCHH----------HH-HHHHHhhcc-C---Ce
Confidence 46899999999998877766 331 22 8899997543 21 223322211 0 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.|+. +++....+|++++|+++++.++||+.+ ...+|+.=.+-|+
T Consensus 93 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~Lk 136 (253)
T 3g5l_A 93 CYEQ---KAIEDIAIEPDAYNVVLSSLALHYIAS---------------------------------FDDICKKVYINLK 136 (253)
T ss_dssp EEEE---CCGGGCCCCTTCEEEEEEESCGGGCSC---------------------------------HHHHHHHHHHHEE
T ss_pred EEEE---cchhhCCCCCCCeEEEEEchhhhhhhh---------------------------------HHHHHHHHHHHcC
Confidence 3444 788888899999999999999999622 1122333356677
Q ss_pred cCCeEEEEecc
Q 024331 210 AEGRMVLTFLG 220 (269)
Q Consensus 210 pGG~lv~~~~g 220 (269)
|||+++++...
T Consensus 137 pgG~l~~~~~~ 147 (253)
T 3g5l_A 137 SSGSFIFSVEH 147 (253)
T ss_dssp EEEEEEEEEEC
T ss_pred CCcEEEEEeCC
Confidence 99999998654
No 30
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.64 E-value=1.2e-07 Score=83.39 Aligned_cols=110 Identities=18% Similarity=0.280 Sum_probs=71.9
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
+...+|+|+|||+|..+..+. ++. |..+|+..|+..+= +........ ..+.. .
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~--------~~~-------~~~~v~~vD~s~~~-------~~~a~~~~~-~~~~~----~ 88 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILA--------KNN-------PDAEITSIDISPES-------LEKARENTE-KNGIK----N 88 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHH--------HHC-------TTSEEEEEESCHHH-------HHHHHHHHH-HTTCC----S
T ss_pred CCCCeEEEecCCCCHHHHHHH--------HhC-------CCCEEEEEECCHHH-------HHHHHHHHH-HcCCC----C
Confidence 456899999999999887766 442 56899999986540 111111111 11110 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
-.|+ .+++...++|++++|+++++.++||+.+.+ .+|+.=.+-|
T Consensus 89 ~~~~---~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~---------------------------------~~l~~~~~~L 132 (276)
T 3mgg_A 89 VKFL---QANIFSLPFEDSSFDHIFVCFVLEHLQSPE---------------------------------EALKSLKKVL 132 (276)
T ss_dssp EEEE---ECCGGGCCSCTTCEEEEEEESCGGGCSCHH---------------------------------HHHHHHHHHE
T ss_pred cEEE---EcccccCCCCCCCeeEEEEechhhhcCCHH---------------------------------HHHHHHHHHc
Confidence 1333 378888899999999999999999964311 1122224567
Q ss_pred ccCCeEEEEeccc
Q 024331 209 VAEGRMVLTFLGR 221 (269)
Q Consensus 209 ~pGG~lv~~~~g~ 221 (269)
+|||.+++.....
T Consensus 133 ~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 133 KPGGTITVIEGDH 145 (276)
T ss_dssp EEEEEEEEEEECG
T ss_pred CCCcEEEEEEcCC
Confidence 7999999987654
No 31
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.63 E-value=7e-08 Score=81.98 Aligned_cols=110 Identities=17% Similarity=0.068 Sum_probs=70.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcC-CCCCC--
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGA-- 126 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~-~~~~~-- 126 (269)
++.+|+|+|||+|..+..+. ++ .|..+|+..|+... +. +..+++.. .++..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~--------~~-------~~~~~v~gvD~s~~----------~~-~~a~~~~~~~~~~~~~ 82 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLL--------KD-------KSFEQITGVDVSYS----------VL-ERAKDRLKIDRLPEMQ 82 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHH--------TS-------TTCCEEEEEESCHH----------HH-HHHHHHHTGGGSCHHH
T ss_pred CCCEEEEecCCCCHHHHHHH--------hc-------CCCCEEEEEECCHH----------HH-HHHHHHHHhhcccccc
Confidence 35799999999999887766 32 25589999998654 11 11211110 00000
Q ss_pred -CCceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 024331 127 -AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (269)
Q Consensus 127 -~~~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 205 (269)
..--|+. +++....++++++|+++++.++|+++. .++..+|+.=+
T Consensus 83 ~~~v~~~~---~d~~~~~~~~~~fD~V~~~~~l~~~~~-------------------------------~~~~~~l~~~~ 128 (219)
T 3jwg_A 83 RKRISLFQ---SSLVYRDKRFSGYDAATVIEVIEHLDE-------------------------------NRLQAFEKVLF 128 (219)
T ss_dssp HTTEEEEE---CCSSSCCGGGTTCSEEEEESCGGGCCH-------------------------------HHHHHHHHHHH
T ss_pred CcceEEEe---CcccccccccCCCCEEEEHHHHHhCCH-------------------------------HHHHHHHHHHH
Confidence 0012333 677777888899999999999999622 23445565557
Q ss_pred hhhccCCeEEEEec
Q 024331 206 EELVAEGRMVLTFL 219 (269)
Q Consensus 206 ~EL~pGG~lv~~~~ 219 (269)
+-|+|||+++.+..
T Consensus 129 ~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 129 EFTRPQTVIVSTPN 142 (219)
T ss_dssp TTTCCSEEEEEEEB
T ss_pred HhhCCCEEEEEccc
Confidence 88899996665543
No 32
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.61 E-value=8.4e-08 Score=85.84 Aligned_cols=111 Identities=18% Similarity=0.280 Sum_probs=71.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..+..++ +++ .+..+|+..|+... + +....+......+... +-
T Consensus 36 ~~~~vLDiGcG~G~~~~~la--------~~~------~~~~~v~gvD~s~~-~------~~~a~~~~~~~~~~~~---~v 91 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMA--------QEL------KPFEQIIGSDLSAT-M------IKTAEVIKEGSPDTYK---NV 91 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHH--------HHS------SCCSEEEEEESCHH-H------HHHHHHHHHHCC-CCT---TE
T ss_pred CCCEEEEECCCCCHHHHHHH--------HhC------CCCCEEEEEeCCHH-H------HHHHHHHHHhccCCCC---ce
Confidence 56899999999999988777 432 24689999998654 1 1111111111101110 12
Q ss_pred eEEeecCCCccCCCCCC------CceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhh
Q 024331 130 CFFTGVPGSFYGRLFPR------NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~------~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 203 (269)
.|+. +++....+++ +++|+++++.++||+ + +..+|+.
T Consensus 92 ~~~~---~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~---------------------------------~~~~l~~ 134 (299)
T 3g5t_A 92 SFKI---SSSDDFKFLGADSVDKQKIDMITAVECAHWF-D---------------------------------FEKFQRS 134 (299)
T ss_dssp EEEE---CCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-C---------------------------------HHHHHHH
T ss_pred EEEE---cCHHhCCccccccccCCCeeEEeHhhHHHHh-C---------------------------------HHHHHHH
Confidence 3433 7888878888 999999999999996 2 1122222
Q ss_pred hhhhhccCCeEEEEeccc
Q 024331 204 RSEELVAEGRMVLTFLGR 221 (269)
Q Consensus 204 Ra~EL~pGG~lv~~~~g~ 221 (269)
=.+-|+|||.+++...+.
T Consensus 135 ~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 135 AYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp HHHHEEEEEEEEEEEEEE
T ss_pred HHHhcCCCcEEEEEecCC
Confidence 256678999999966554
No 33
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.61 E-value=2.7e-07 Score=78.78 Aligned_cols=109 Identities=16% Similarity=0.166 Sum_probs=71.2
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
++..+|+|+|||+|..+..++ ++ ..+++..|+...- +......... .+..
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~--------~~---------~~~~~~~D~s~~~-------~~~a~~~~~~-~~~~----- 85 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLC--------PK---------FKNTWAVDLSQEM-------LSEAENKFRS-QGLK----- 85 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHG--------GG---------SSEEEEECSCHHH-------HHHHHHHHHH-TTCC-----
T ss_pred CCCCeEEEeCCCCCHHHHHHH--------HC---------CCcEEEEECCHHH-------HHHHHHHHhh-cCCC-----
Confidence 356799999999999988766 32 2578888876540 1111111111 1111
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccc-cccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~-alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
-.+ +.+++....+| +++|+++++. ++||+.. ..|...+|+.=++-
T Consensus 86 ~~~---~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~------------------------------~~~~~~~l~~~~~~ 131 (246)
T 1y8c_A 86 PRL---ACQDISNLNIN-RKFDLITCCLDSTNYIID------------------------------SDDLKKYFKAVSNH 131 (246)
T ss_dssp CEE---ECCCGGGCCCS-CCEEEEEECTTGGGGCCS------------------------------HHHHHHHHHHHHTT
T ss_pred eEE---EecccccCCcc-CCceEEEEcCccccccCC------------------------------HHHHHHHHHHHHHh
Confidence 123 34788877777 8999999998 9998521 02445566666788
Q ss_pred hccCCeEEEEeccc
Q 024331 208 LVAEGRMVLTFLGR 221 (269)
Q Consensus 208 L~pGG~lv~~~~g~ 221 (269)
|+|||++++.+...
T Consensus 132 L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 132 LKEGGVFIFDINSY 145 (246)
T ss_dssp EEEEEEEEEEEECH
T ss_pred cCCCcEEEEEecCH
Confidence 99999999977643
No 34
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.61 E-value=5.2e-08 Score=81.68 Aligned_cols=105 Identities=16% Similarity=0.152 Sum_probs=71.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..+..++ ++ ..+|+..|+... +. +..+++. . +-.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~----------~~-~~a~~~~-~-----~~~ 87 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLA--------SL---------GHQIEGLEPATR----------LV-ELARQTH-P-----SVT 87 (203)
T ss_dssp CSCEEEETCTTCHHHHHHH--------HT---------TCCEEEECCCHH----------HH-HHHHHHC-T-----TSE
T ss_pred CCeEEEecCCCCHHHHHHH--------hc---------CCeEEEEeCCHH----------HH-HHHHHhC-C-----CCe
Confidence 5799999999999887666 32 257888887543 21 2222221 1 123
Q ss_pred EEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~p 210 (269)
|+. +++....+|++++|+++++.++|+++. .|...+|+.=++-|+|
T Consensus 88 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L~p 133 (203)
T 3h2b_A 88 FHH---GTITDLSDSPKRWAGLLAWYSLIHMGP-------------------------------GELPDALVALRMAVED 133 (203)
T ss_dssp EEC---CCGGGGGGSCCCEEEEEEESSSTTCCT-------------------------------TTHHHHHHHHHHTEEE
T ss_pred EEe---CcccccccCCCCeEEEEehhhHhcCCH-------------------------------HHHHHHHHHHHHHcCC
Confidence 433 788888899999999999999999641 1222334444677889
Q ss_pred CCeEEEEecccCC
Q 024331 211 EGRMVLTFLGRKS 223 (269)
Q Consensus 211 GG~lv~~~~g~~~ 223 (269)
||+++++.+....
T Consensus 134 gG~l~i~~~~~~~ 146 (203)
T 3h2b_A 134 GGGLLMSFFSGPS 146 (203)
T ss_dssp EEEEEEEEECCSS
T ss_pred CcEEEEEEccCCc
Confidence 9999999876654
No 35
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.60 E-value=2.5e-07 Score=84.20 Aligned_cols=113 Identities=17% Similarity=0.150 Sum_probs=70.9
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
....+|+|+|||+|..+..++ +++ |..+++..|+|.- +....+.... .+.. .
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~~--------~~~a~~~~~~-~~~~----~ 219 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALL--------TAH-------EDLSGTVLDLQGP--------ASAAHRRFLD-TGLS----G 219 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHHH--------HHHHHHHHHH-TTCT----T
T ss_pred CCCCEEEEeCCChhHHHHHHH--------HHC-------CCCeEEEecCHHH--------HHHHHHhhhh-cCcC----c
Confidence 346899999999998877666 553 5678888898432 2221111211 1110 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
+ +..+.++|+ ..+|. ++|++++...||..++ .+..++|+.=++-|
T Consensus 220 ~--v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~-------------------------------~~~~~~l~~~~~~L 264 (332)
T 3i53_A 220 R--AQVVVGSFF-DPLPA-GAGGYVLSAVLHDWDD-------------------------------LSAVAILRRCAEAA 264 (332)
T ss_dssp T--EEEEECCTT-SCCCC-SCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHH
T ss_pred C--eEEecCCCC-CCCCC-CCcEEEEehhhccCCH-------------------------------HHHHHHHHHHHHhc
Confidence 2 223458998 56787 8999999999985321 12233444445667
Q ss_pred ccCCeEEEEecccCCC
Q 024331 209 VAEGRMVLTFLGRKSQ 224 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~~ 224 (269)
+|||++++.....++.
T Consensus 265 ~pgG~l~i~e~~~~~~ 280 (332)
T 3i53_A 265 GSGGVVLVIEAVAGDE 280 (332)
T ss_dssp TTTCEEEEEECCCC--
T ss_pred CCCCEEEEEeecCCCC
Confidence 7999999987765543
No 36
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.60 E-value=4.2e-07 Score=76.96 Aligned_cols=108 Identities=15% Similarity=0.206 Sum_probs=67.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. ++. + +|+..|+... . +....+.... .+. .-
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~--------~~~-------~--~v~~vD~s~~-~------~~~a~~~~~~-~~~-----~~ 87 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLE--------DYG-------F--EVVGVDISED-M------IRKAREYAKS-RES-----NV 87 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHH--------HTT-------C--EEEEEESCHH-H------HHHHHHHHHH-TTC-----CC
T ss_pred CCCeEEEEeccCCHHHHHHH--------HcC-------C--EEEEEECCHH-H------HHHHHHHHHh-cCC-----Cc
Confidence 36799999999998876665 331 2 7888887543 1 1111111111 111 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.++. +++....+|++++|+++++.++|+... .|...+|+.=++-|+
T Consensus 88 ~~~~---~d~~~~~~~~~~~D~v~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~L~ 133 (227)
T 1ve3_A 88 EFIV---GDARKLSFEDKTFDYVIFIDSIVHFEP-------------------------------LELNQVFKEVRRVLK 133 (227)
T ss_dssp EEEE---CCTTSCCSCTTCEEEEEEESCGGGCCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred eEEE---CchhcCCCCCCcEEEEEEcCchHhCCH-------------------------------HHHHHHHHHHHHHcC
Confidence 3433 788887789999999999888544110 233444554466788
Q ss_pred cCCeEEEEeccc
Q 024331 210 AEGRMVLTFLGR 221 (269)
Q Consensus 210 pGG~lv~~~~g~ 221 (269)
|||++++..+..
T Consensus 134 ~gG~l~~~~~~~ 145 (227)
T 1ve3_A 134 PSGKFIMYFTDL 145 (227)
T ss_dssp EEEEEEEEEECH
T ss_pred CCcEEEEEecCh
Confidence 999999987753
No 37
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.60 E-value=9.1e-08 Score=82.08 Aligned_cols=105 Identities=17% Similarity=0.314 Sum_probs=69.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..+..+. ++ ..+|+..|+... +. +..+++... . +-
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~~----------~~-~~a~~~~~~-~---~~ 100 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLS--------RT---------GYKAVGVDISEV----------MI-QKGKERGEG-P---DL 100 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESCHH----------HH-HHHHTTTCB-T---TE
T ss_pred CCCeEEEEcCCCCHHHHHHH--------Hc---------CCeEEEEECCHH----------HH-HHHHhhccc-C---Cc
Confidence 46799999999999887766 32 257889887543 11 212222111 0 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.|+. +++....+|++++|++++..++|++.+ +. .+|+.=.+-|+
T Consensus 101 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~------------------~~---------------~~l~~~~~~L~ 144 (242)
T 3l8d_A 101 SFIK---GDLSSLPFENEQFEAIMAINSLEWTEE------------------PL---------------RALNEIKRVLK 144 (242)
T ss_dssp EEEE---CBTTBCSSCTTCEEEEEEESCTTSSSC------------------HH---------------HHHHHHHHHEE
T ss_pred eEEE---cchhcCCCCCCCccEEEEcChHhhccC------------------HH---------------HHHHHHHHHhC
Confidence 3433 788888899999999999999998622 11 12222245677
Q ss_pred cCCeEEEEecccC
Q 024331 210 AEGRMVLTFLGRK 222 (269)
Q Consensus 210 pGG~lv~~~~g~~ 222 (269)
|||+++++..+..
T Consensus 145 pgG~l~i~~~~~~ 157 (242)
T 3l8d_A 145 SDGYACIAILGPT 157 (242)
T ss_dssp EEEEEEEEEECTT
T ss_pred CCeEEEEEEcCCc
Confidence 9999999987664
No 38
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.60 E-value=2.2e-07 Score=80.21 Aligned_cols=108 Identities=16% Similarity=0.111 Sum_probs=72.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ ++. ..+|+..|.... + .+..+++... .
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~--------~~~--------~~~v~~vD~s~~----------~-~~~a~~~~~~------~ 139 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLL--------TKL--------YATTDLLEPVKH----------M-LEEAKRELAG------M 139 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTH--------HHH--------CSEEEEEESCHH----------H-HHHHHHHTTT------S
T ss_pred CCCEEEEECCCcCHHHHHHH--------Hhh--------cCEEEEEeCCHH----------H-HHHHHHHhcc------C
Confidence 46899999999999888776 332 146788886543 1 1222322211 0
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.-+..+.+++....+|++++|+++++.++|+++. .|+..+|+.=.+-|+
T Consensus 140 ~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~Lk 188 (254)
T 1xtp_A 140 PVGKFILASMETATLPPNTYDLIVIQWTAIYLTD-------------------------------ADFVKFFKHCQQALT 188 (254)
T ss_dssp SEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred CceEEEEccHHHCCCCCCCeEEEEEcchhhhCCH-------------------------------HHHHHHHHHHHHhcC
Confidence 1122234788888889999999999999998532 234455555567788
Q ss_pred cCCeEEEEeccc
Q 024331 210 AEGRMVLTFLGR 221 (269)
Q Consensus 210 pGG~lv~~~~g~ 221 (269)
|||+++++....
T Consensus 189 pgG~l~i~~~~~ 200 (254)
T 1xtp_A 189 PNGYIFFKENCS 200 (254)
T ss_dssp EEEEEEEEEEBC
T ss_pred CCeEEEEEecCC
Confidence 999999998643
No 39
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.59 E-value=2.4e-07 Score=78.61 Aligned_cols=116 Identities=16% Similarity=0.130 Sum_probs=74.4
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcC-CCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAA 127 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~-~~~~~~ 127 (269)
++..+|+|+|||+|..+..++ ++ ..+|+..|+... +. +..++... .+....
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~~----------~~-~~a~~~~~~~~~~~~ 80 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELA--------SK---------GYSVTGIDINSE----------AI-RLAETAARSPGLNQK 80 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESCHH----------HH-HHHHHHTTCCSCCSS
T ss_pred CCCCeEEEECCCCCHHHHHHH--------hC---------CCeEEEEECCHH----------HH-HHHHHHHHhcCCccc
Confidence 356799999999999888776 32 268999998654 11 11222211 111000
Q ss_pred CceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 128 ~~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
..-.+..+.+++....+|++++|+++++..+|++.. + .++..+|+.=.+-
T Consensus 81 ~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~-------------------~-----------~~~~~~l~~~~~~ 130 (235)
T 3sm3_A 81 TGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPD-------------------P-----------KERSRIIKEVFRV 130 (235)
T ss_dssp SSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCC-------------------H-----------HHHHHHHHHHHHH
T ss_pred cCcceEEEEecccccCCCCCceeEEEEcchhhcCCC-------------------H-----------HHHHHHHHHHHHH
Confidence 011233345788888899999999999999998532 1 1122344444567
Q ss_pred hccCCeEEEEecccC
Q 024331 208 LVAEGRMVLTFLGRK 222 (269)
Q Consensus 208 L~pGG~lv~~~~g~~ 222 (269)
|+|||+++++.++..
T Consensus 131 L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 131 LKPGAYLYLVEFGQN 145 (235)
T ss_dssp EEEEEEEEEEEEBCC
T ss_pred cCCCeEEEEEECCcc
Confidence 789999999988764
No 40
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.58 E-value=4.8e-07 Score=79.76 Aligned_cols=113 Identities=16% Similarity=0.206 Sum_probs=72.9
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAA 127 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~ 127 (269)
++..+|+|+|||+|..+..+. +. +..+|+..|+... +. +..+++. ..+.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~--------~~--------~~~~v~gvD~s~~----------~~-~~a~~~~~~~~~--- 112 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYE--------RA--------GIGEYYGVDIAEV----------SI-NDARVRARNMKR--- 112 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHH--------HH--------TCSEEEEEESCHH----------HH-HHHHHHHHTSCC---
T ss_pred CCCCeEEEECCCCCHHHHHHH--------HC--------CCCEEEEEECCHH----------HH-HHHHHHHHhcCC---
Confidence 346799999999999887655 32 2348899997654 11 1122111 1111
Q ss_pred CceEEeecCCCccCCCC-CCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh
Q 024331 128 GQCFFTGVPGSFYGRLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (269)
Q Consensus 128 ~~~f~~~vpgSFy~~lf-P~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 206 (269)
..-+..+.+++....+ +++++|++++..++||+-. . ..|...+|+.=++
T Consensus 113 -~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~------------------~-----------~~~~~~~l~~~~~ 162 (298)
T 1ri5_A 113 -RFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFS------------------T-----------SESLDIAQRNIAR 162 (298)
T ss_dssp -SSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGS------------------S-----------HHHHHHHHHHHHH
T ss_pred -CccEEEEECCccccccCCCCCcCEEEECchhhhhcC------------------C-----------HHHHHHHHHHHHH
Confidence 0112233478877777 6899999999999998411 0 1344556665577
Q ss_pred hhccCCeEEEEeccc
Q 024331 207 ELVAEGRMVLTFLGR 221 (269)
Q Consensus 207 EL~pGG~lv~~~~g~ 221 (269)
-|+|||+++++.+..
T Consensus 163 ~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 163 HLRPGGYFIMTVPSR 177 (298)
T ss_dssp TEEEEEEEEEEEECH
T ss_pred hcCCCCEEEEEECCH
Confidence 888999999998653
No 41
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.56 E-value=2.2e-07 Score=82.11 Aligned_cols=134 Identities=13% Similarity=0.060 Sum_probs=75.4
Q ss_pred HHHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC-----------
Q 024331 32 AKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN----------- 100 (269)
Q Consensus 32 ~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N----------- 100 (269)
+..++.+.+.++......+..+|+|+|||+|..++.++ .. .--+|+..|+..+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~--------~~--------~~~~v~g~D~s~~~l~~a~~~~~~ 100 (263)
T 2a14_A 37 MLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAA--------CD--------SFQDITLSDFTDRNREELEKWLKK 100 (263)
T ss_dssp HHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTG--------GG--------TEEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHH--------Hh--------hhcceeeccccHHHHHHHHHHHhc
Confidence 44555555555543223356899999999998876544 21 1126888887754
Q ss_pred -----chHHHHHhhHH----------HHHHHHHhcCCCCCCCCceEEeecCCCccC-CCC---CCCceeeEecccccccc
Q 024331 101 -----DFNTIFRSLAS----------FQKILRKQLGSASGAAGQCFFTGVPGSFYG-RLF---PRNSVHLFHSSYSLQWL 161 (269)
Q Consensus 101 -----DFntLF~~l~~----------~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~-~lf---P~~Svd~~~Ss~alHWL 161 (269)
|++.....+.. ..+.++. .+ ...+.++... .++ +.+++|+++|+++|||+
T Consensus 101 ~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~----------~i-~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i 169 (263)
T 2a14_A 101 EPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA----------AV-KRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECA 169 (263)
T ss_dssp CTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH----------HE-EEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHH
T ss_pred CCCcccchHHHHHHHhcCCCCcchhhHHHHHHh----------hh-heEEeccccCCCCCCccccCCCCEeeehHHHHHh
Confidence 22111111100 0000000 11 0023356655 233 36799999999999996
Q ss_pred ccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccCCeEEEEeccc
Q 024331 162 SQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGR 221 (269)
Q Consensus 162 S~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~g~ 221 (269)
..-+ .|+...|+.=++-|||||+|+++....
T Consensus 170 ~~~~-----------------------------~~~~~~l~~i~r~LKPGG~li~~~~~~ 200 (263)
T 2a14_A 170 CCSL-----------------------------DAYRAALCNLASLLKPGGHLVTTVTLR 200 (263)
T ss_dssp CSSH-----------------------------HHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred cCCH-----------------------------HHHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 4311 234444444467888999999997543
No 42
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.56 E-value=3e-07 Score=77.69 Aligned_cols=107 Identities=11% Similarity=0.083 Sum_probs=71.1
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
....+|+|+|||+|..+..+. ++ ..+|+..|+... +. +..+++... . +
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~~----------~~-~~a~~~~~~-~---~ 97 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLA--------PH---------CKRLTVIDVMPR----------AI-GRACQRTKR-W---S 97 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHG--------GG---------EEEEEEEESCHH----------HH-HHHHHHTTT-C---S
T ss_pred CCCCcEEEEcCCCCHHHHHHH--------Hc---------CCEEEEEECCHH----------HH-HHHHHhccc-C---C
Confidence 346899999999999887765 32 258889887643 21 222222211 1 1
Q ss_pred c-eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 129 Q-CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 129 ~-~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
+ .|+. +++.... |++++|+++++.++||+... .++..+|+.=++-
T Consensus 98 ~~~~~~---~d~~~~~-~~~~fD~v~~~~~l~~~~~~------------------------------~~~~~~l~~~~~~ 143 (216)
T 3ofk_A 98 HISWAA---TDILQFS-TAELFDLIVVAEVLYYLEDM------------------------------TQMRTAIDNMVKM 143 (216)
T ss_dssp SEEEEE---CCTTTCC-CSCCEEEEEEESCGGGSSSH------------------------------HHHHHHHHHHHHT
T ss_pred CeEEEE---cchhhCC-CCCCccEEEEccHHHhCCCH------------------------------HHHHHHHHHHHHH
Confidence 2 2333 7777766 89999999999999996431 1233445555678
Q ss_pred hccCCeEEEEeccc
Q 024331 208 LVAEGRMVLTFLGR 221 (269)
Q Consensus 208 L~pGG~lv~~~~g~ 221 (269)
|+|||.++++....
T Consensus 144 L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 144 LAPGGHLVFGSARD 157 (216)
T ss_dssp EEEEEEEEEEEECH
T ss_pred cCCCCEEEEEecCC
Confidence 88999999987644
No 43
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.56 E-value=4.2e-07 Score=81.36 Aligned_cols=117 Identities=15% Similarity=0.116 Sum_probs=74.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ +++ + .+|+..|+... .+....+... ..+.. .+
T Consensus 72 ~~~~vLDiGcG~G~~~~~la--------~~~-------~-~~v~gvD~s~~-------~~~~a~~~~~-~~~~~----~~ 123 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAV--------AEY-------D-VNVIGLTLSEN-------QYAHDKAMFD-EVDSP----RR 123 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH-------C-CEEEEEECCHH-------HHHHHHHHHH-HSCCS----SC
T ss_pred CcCEEEEeeccCcHHHHHHH--------HhC-------C-CEEEEEECCHH-------HHHHHHHHHH-hcCCC----Cc
Confidence 45799999999999988877 543 3 68999998654 0111111111 11211 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
+ ..+.+++... ++++|+++|..++|++.+... .. ..+++..+|+.=.+-|+
T Consensus 124 v--~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~-~~-----------------------~~~~~~~~l~~~~~~Lk 174 (302)
T 3hem_A 124 K--EVRIQGWEEF---DEPVDRIVSLGAFEHFADGAG-DA-----------------------GFERYDTFFKKFYNLTP 174 (302)
T ss_dssp E--EEEECCGGGC---CCCCSEEEEESCGGGTTCCSS-CC-----------------------CTTHHHHHHHHHHHSSC
T ss_pred e--EEEECCHHHc---CCCccEEEEcchHHhcCcccc-cc-----------------------chhHHHHHHHHHHHhcC
Confidence 2 1223666553 899999999999999765311 00 01344556666677888
Q ss_pred cCCeEEEEecccCC
Q 024331 210 AEGRMVLTFLGRKS 223 (269)
Q Consensus 210 pGG~lv~~~~g~~~ 223 (269)
|||++++..+....
T Consensus 175 pgG~l~i~~~~~~~ 188 (302)
T 3hem_A 175 DDGRMLLHTITIPD 188 (302)
T ss_dssp TTCEEEEEEEECCC
T ss_pred CCcEEEEEEEeccC
Confidence 99999999887653
No 44
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.56 E-value=1.7e-07 Score=83.21 Aligned_cols=81 Identities=6% Similarity=0.010 Sum_probs=54.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCC-------
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS------- 122 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~------- 122 (269)
...+|+|+|||+|.++..++ ++ ..+|+..|+... +. +..+++.+.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La--------~~---------G~~V~gvD~S~~----------~i-~~a~~~~~~~~~~~~~ 119 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFA--------DR---------GHTVVGVEISEI----------GI-REFFAEQNLSYTEEPL 119 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHH--------HT---------TCEEEEECSCHH----------HH-HHHHHHTTCCEEEEEC
T ss_pred CCCeEEEeCCCCcHHHHHHH--------HC---------CCeEEEEECCHH----------HH-HHHHHhcccccccccc
Confidence 45799999999999998777 43 268999998876 32 223222210
Q ss_pred ----CC-----CCCCceEEeecCCCccCCCCCC-CceeeEecccccccc
Q 024331 123 ----AS-----GAAGQCFFTGVPGSFYGRLFPR-NSVHLFHSSYSLQWL 161 (269)
Q Consensus 123 ----~~-----~~~~~~f~~~vpgSFy~~lfP~-~Svd~~~Ss~alHWL 161 (269)
++ ....--|+. +++....+++ +++|++++..+||++
T Consensus 120 ~~~~~~~~~~~~~~~i~~~~---~D~~~l~~~~~~~FD~V~~~~~l~~l 165 (252)
T 2gb4_A 120 AEIAGAKVFKSSSGSISLYC---CSIFDLPRANIGKFDRIWDRGALVAI 165 (252)
T ss_dssp TTSTTCEEEEETTSSEEEEE---SCTTTGGGGCCCCEEEEEESSSTTTS
T ss_pred cccccccccccCCCceEEEE---CccccCCcccCCCEEEEEEhhhhhhC
Confidence 00 000112333 8898887775 899999999999997
No 45
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.56 E-value=6.7e-07 Score=83.00 Aligned_cols=112 Identities=16% Similarity=0.221 Sum_probs=73.5
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
.+..+|+|+|||+|..+..++ +++ |..+++..|+|.- +....+.... .+.. .
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~~--------~~~a~~~~~~-~~l~----~ 252 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVL--------DAF-------PGLRGTLLERPPV--------AEEARELLTG-RGLA----D 252 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHHH--------HHHHHHHHHH-TTCT----T
T ss_pred ccCcEEEEeCCCccHHHHHHH--------HHC-------CCCeEEEEcCHHH--------HHHHHHhhhh-cCcC----C
Confidence 356899999999999887776 554 6789999998432 2221111211 1110 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
+ +..+.++|+ ..+|. ++|++++...||+.++ .+..++|+.=++-|
T Consensus 253 ~--v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d-------------------------------~~~~~~L~~~~~~L 297 (369)
T 3gwz_A 253 R--CEILPGDFF-ETIPD-GADVYLIKHVLHDWDD-------------------------------DDVVRILRRIATAM 297 (369)
T ss_dssp T--EEEEECCTT-TCCCS-SCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHTTC
T ss_pred c--eEEeccCCC-CCCCC-CceEEEhhhhhccCCH-------------------------------HHHHHHHHHHHHHc
Confidence 2 223448998 67787 8999999999997422 12223444446778
Q ss_pred ccCCeEEEEecccCC
Q 024331 209 VAEGRMVLTFLGRKS 223 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~ 223 (269)
+|||++++.....++
T Consensus 298 ~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 298 KPDSRLLVIDNLIDE 312 (369)
T ss_dssp CTTCEEEEEEEBCCS
T ss_pred CCCCEEEEEEeccCC
Confidence 899999998876654
No 46
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.55 E-value=9.5e-08 Score=80.69 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=70.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ ++ ..+|+..|+... +. +..+++.+ -
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~~----------~~-~~a~~~~~-------~ 87 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAML--------AA---------GFDVDATDGSPE----------LA-AEASRRLG-------R 87 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHH--------HT---------TCEEEEEESCHH----------HH-HHHHHHHT-------S
T ss_pred CCCcEEEECCCCCHHHHHHH--------Hc---------CCeEEEECCCHH----------HH-HHHHHhcC-------C
Confidence 46799999999999887776 32 268889987543 11 11222211 1
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.++. +++.... +++++|+++++.++|++.. .|+..+|+.=++-|+
T Consensus 88 ~~~~---~d~~~~~-~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~Lk 132 (211)
T 3e23_A 88 PVRT---MLFHQLD-AIDAYDAVWAHACLLHVPR-------------------------------DELADVLKLIWRALK 132 (211)
T ss_dssp CCEE---CCGGGCC-CCSCEEEEEECSCGGGSCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred ceEE---eeeccCC-CCCcEEEEEecCchhhcCH-------------------------------HHHHHHHHHHHHhcC
Confidence 2323 6777766 8999999999999998531 234445555566788
Q ss_pred cCCeEEEEecccC
Q 024331 210 AEGRMVLTFLGRK 222 (269)
Q Consensus 210 pGG~lv~~~~g~~ 222 (269)
|||++++++....
T Consensus 133 pgG~l~~~~~~~~ 145 (211)
T 3e23_A 133 PGGLFYASYKSGE 145 (211)
T ss_dssp EEEEEEEEEECCS
T ss_pred CCcEEEEEEcCCC
Confidence 9999999986554
No 47
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.55 E-value=2.5e-07 Score=86.37 Aligned_cols=115 Identities=19% Similarity=0.235 Sum_probs=72.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHh---c-C-CCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---L-G-SAS 124 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~---~-~-~~~ 124 (269)
+..+|+|+|||+|..++.++ +.+ .|..+|+..|+... . +....+.+... . | ...
T Consensus 83 ~~~~VLDlGcG~G~~~~~la--------~~~------~~~~~v~gvD~s~~-~------l~~a~~~~~~~~~~~~g~~~~ 141 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLAS--------KLV------GEHGKVIGVDMLDN-Q------LEVARKYVEYHAEKFFGSPSR 141 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH------TTTCEEEEEECCHH-H------HHHHHHTHHHHHHHHHSSTTC
T ss_pred CCCEEEEecCccCHHHHHHH--------HHh------CCCCEEEEEECCHH-H------HHHHHHHHHHhhhhcccccCC
Confidence 46799999999999988777 443 14579999998654 1 11111111100 0 2 100
Q ss_pred CCCCceEEeecCCCccCC------CCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHH
Q 024331 125 GAAGQCFFTGVPGSFYGR------LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFS 198 (269)
Q Consensus 125 ~~~~~~f~~~vpgSFy~~------lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~ 198 (269)
.+-.|+. +++... .+|++++|+++|+.++||+.+. .
T Consensus 142 --~~v~~~~---~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~---------------------------------~ 183 (383)
T 4fsd_A 142 --SNVRFLK---GFIENLATAEPEGVPDSSVDIVISNCVCNLSTNK---------------------------------L 183 (383)
T ss_dssp --CCEEEEE---SCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCH---------------------------------H
T ss_pred --CceEEEE---ccHHHhhhcccCCCCCCCEEEEEEccchhcCCCH---------------------------------H
Confidence 0123433 677765 8999999999999999996331 1
Q ss_pred HHHhhhhhhhccCCeEEEEecccCC
Q 024331 199 LFLKCRSEELVAEGRMVLTFLGRKS 223 (269)
Q Consensus 199 ~FL~~Ra~EL~pGG~lv~~~~g~~~ 223 (269)
.+|+.=.+-|||||+|+++.+....
T Consensus 184 ~~l~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 184 ALFKEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHcCCCCEEEEEEecccc
Confidence 2233335677899999999876653
No 48
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.54 E-value=3.8e-07 Score=78.92 Aligned_cols=109 Identities=17% Similarity=0.229 Sum_probs=69.1
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
....+|+|+|||+|..+..++ +.. .+|+..|+... . +......... .+.. .
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~--------~~~---------~~v~~vD~s~~-~------~~~a~~~~~~-~~~~----~ 70 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFS--------PYV---------QECIGVDATKE-M------VEVASSFAQE-KGVE----N 70 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHG--------GGS---------SEEEEEESCHH-H------HHHHHHHHHH-HTCC----S
T ss_pred CCCCEEEEEccCcCHHHHHHH--------HhC---------CEEEEEECCHH-H------HHHHHHHHHH-cCCC----C
Confidence 346899999999999887665 321 37888887543 1 1111111111 1210 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
-.|+ .+++....+|++++|++++..++||+.+. ..+|+.=.+-|
T Consensus 71 v~~~---~~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------~~~l~~~~~~L 114 (239)
T 1xxl_A 71 VRFQ---QGTAESLPFPDDSFDIITCRYAAHHFSDV---------------------------------RKAVREVARVL 114 (239)
T ss_dssp EEEE---ECBTTBCCSCTTCEEEEEEESCGGGCSCH---------------------------------HHHHHHHHHHE
T ss_pred eEEE---ecccccCCCCCCcEEEEEECCchhhccCH---------------------------------HHHHHHHHHHc
Confidence 1233 37888888999999999999999986321 12222225677
Q ss_pred ccCCeEEEEecccC
Q 024331 209 VAEGRMVLTFLGRK 222 (269)
Q Consensus 209 ~pGG~lv~~~~g~~ 222 (269)
+|||+++++.....
T Consensus 115 kpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 115 KQDGRFLLVDHYAP 128 (239)
T ss_dssp EEEEEEEEEEECBC
T ss_pred CCCcEEEEEEcCCC
Confidence 89999999876553
No 49
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.54 E-value=3.3e-07 Score=77.54 Aligned_cols=105 Identities=16% Similarity=0.158 Sum_probs=70.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ ++ ..+|+..|+... +. +..++.... +-
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~~----------~~-~~a~~~~~~-----~~ 91 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLL--------LA---------GRTVYGIEPSRE----------MR-MIAKEKLPK-----EF 91 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHH--------HT---------TCEEEEECSCHH----------HH-HHHHHHSCT-----TC
T ss_pred CCCeEEEeCCCCCHHHHHHH--------hC---------CCeEEEEeCCHH----------HH-HHHHHhCCC-----ce
Confidence 35799999999999887766 32 268899997654 21 222222111 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
-|+ .+++....++ +++|++++..++||+.. + +...+|+.=.+-|+
T Consensus 92 ~~~---~~d~~~~~~~-~~fD~v~~~~~l~~~~~-------------------~------------~~~~~l~~~~~~Lk 136 (220)
T 3hnr_A 92 SIT---EGDFLSFEVP-TSIDTIVSTYAFHHLTD-------------------D------------EKNVAIAKYSQLLN 136 (220)
T ss_dssp CEE---SCCSSSCCCC-SCCSEEEEESCGGGSCH-------------------H------------HHHHHHHHHHHHSC
T ss_pred EEE---eCChhhcCCC-CCeEEEEECcchhcCCh-------------------H------------HHHHHHHHHHHhcC
Confidence 333 3788888888 99999999999999633 0 11223444456778
Q ss_pred cCCeEEEEecccC
Q 024331 210 AEGRMVLTFLGRK 222 (269)
Q Consensus 210 pGG~lv~~~~g~~ 222 (269)
|||.++++.+...
T Consensus 137 pgG~l~i~~~~~~ 149 (220)
T 3hnr_A 137 KGGKIVFADTIFA 149 (220)
T ss_dssp TTCEEEEEEECBS
T ss_pred CCCEEEEEecccc
Confidence 9999999976554
No 50
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.53 E-value=2e-07 Score=83.76 Aligned_cols=60 Identities=10% Similarity=0.073 Sum_probs=42.2
Q ss_pred CCCccCCC-----CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 024331 136 PGSFYGRL-----FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (269)
Q Consensus 136 pgSFy~~l-----fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~p 210 (269)
.+++.... ++++++|+|+|...+||+. ......++.++|+.=.+-|+|
T Consensus 160 ~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ih---------------------------l~~~~~~~~~~l~~~~~~Lkp 212 (292)
T 3g07_A 160 TGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVH---------------------------LNWGDEGLKRMFRRIYRHLRP 212 (292)
T ss_dssp ECCCCCSSHHHHTTCCCCEEEEEEESCHHHHH---------------------------HHHHHHHHHHHHHHHHHHEEE
T ss_pred ecccccCccccccccCCCcCEEEEChHHHHhh---------------------------hcCCHHHHHHHHHHHHHHhCC
Confidence 36666544 6789999999999999941 011224556666666778889
Q ss_pred CCeEEEEecccC
Q 024331 211 EGRMVLTFLGRK 222 (269)
Q Consensus 211 GG~lv~~~~g~~ 222 (269)
||+|++....+.
T Consensus 213 GG~lil~~~~~~ 224 (292)
T 3g07_A 213 GGILVLEPQPWS 224 (292)
T ss_dssp EEEEEEECCCHH
T ss_pred CcEEEEecCCch
Confidence 999999866554
No 51
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.53 E-value=9.3e-08 Score=84.04 Aligned_cols=144 Identities=15% Similarity=0.080 Sum_probs=88.4
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
.+..+|+|+|||+|..+..+. + |..+|+..|+... +. . ..... .
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~--------~---------~~~~v~gvD~s~~----------~~----~-~a~~~----~ 76 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALA--------N---------QGLFVYAVEPSIV----------MR----Q-QAVVH----P 76 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------T---------TTCEEEEECSCHH----------HH----H-SSCCC----T
T ss_pred CCCCEEEEEcCcccHHHHHHH--------h---------CCCEEEEEeCCHH----------HH----H-HHHhc----c
Confidence 346899999999999887666 2 3579999997653 21 1 01010 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
-+..+.+++....+|++++|++++..++||+.+ +..+|+.=.+-|
T Consensus 77 --~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------~~~~l~~~~~~L 121 (261)
T 3ege_A 77 --QVEWFTGYAENLALPDKSVDGVISILAIHHFSH---------------------------------LEKSFQEMQRII 121 (261)
T ss_dssp --TEEEECCCTTSCCSCTTCBSEEEEESCGGGCSS---------------------------------HHHHHHHHHHHB
T ss_pred --CCEEEECchhhCCCCCCCEeEEEEcchHhhccC---------------------------------HHHHHHHHHHHh
Confidence 122234788888899999999999999998622 122333336789
Q ss_pred ccCCeEEEEecccCCCCCC-Chhh----hH----HHHHHHHHHHHHHHccCcccccccceecccccc
Q 024331 209 VAEGRMVLTFLGRKSQDPS-SKEC----CY----IWELLATALNNMVSEVTKSFLLLIVFNQLNYKL 266 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~~~~~-~~~~----~~----~~~~l~~~l~~mv~eG~i~~~~~d~FnlP~~~~ 266 (269)
+ ||.+++..+........ .... .. .+......- -|.+.|+-. .++..+.+|...|
T Consensus 122 k-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~-v~~~~~~~p~~~~ 185 (261)
T 3ege_A 122 R-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRR-VEAIPFLLPHDLS 185 (261)
T ss_dssp C-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSE-EEEEECCEETTCS
T ss_pred C-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCc-eeEEEecCCCcCc
Confidence 9 99988888765432111 1000 00 011223333 677778743 3446777777666
No 52
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.53 E-value=1e-07 Score=81.33 Aligned_cols=102 Identities=14% Similarity=0.136 Sum_probs=66.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
+.+|+|+|||+|..+..+. ++. .+|+..|+... +. +..+++...+ --
T Consensus 43 ~~~vLDiGcG~G~~~~~l~--------~~~---------~~v~gvD~s~~----------~~-~~a~~~~~~~-----v~ 89 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQ--------EHF---------NDITCVEASEE----------AI-SHAQGRLKDG-----IT 89 (250)
T ss_dssp SSCEEEESCTTSHHHHHHT--------TTC---------SCEEEEESCHH----------HH-HHHHHHSCSC-----EE
T ss_pred CCcEEEECCCCCHHHHHHH--------HhC---------CcEEEEeCCHH----------HH-HHHHHhhhCC-----eE
Confidence 4689999999999877665 321 26888887643 21 2233222111 12
Q ss_pred EEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhh-hhhc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS-EELV 209 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra-~EL~ 209 (269)
|+. +++... +|++++|+++++.+||++.+ + ..+|+.=+ +-|+
T Consensus 90 ~~~---~d~~~~-~~~~~fD~v~~~~~l~~~~~------------------~---------------~~~l~~~~~~~Lk 132 (250)
T 2p7i_A 90 YIH---SRFEDA-QLPRRYDNIVLTHVLEHIDD------------------P---------------VALLKRINDDWLA 132 (250)
T ss_dssp EEE---SCGGGC-CCSSCEEEEEEESCGGGCSS------------------H---------------HHHHHHHHHTTEE
T ss_pred EEE---ccHHHc-CcCCcccEEEEhhHHHhhcC------------------H---------------HHHHHHHHHHhcC
Confidence 333 677665 78999999999999999632 1 12222225 7788
Q ss_pred cCCeEEEEecccC
Q 024331 210 AEGRMVLTFLGRK 222 (269)
Q Consensus 210 pGG~lv~~~~g~~ 222 (269)
|||+++++.+...
T Consensus 133 pgG~l~i~~~~~~ 145 (250)
T 2p7i_A 133 EGGRLFLVCPNAN 145 (250)
T ss_dssp EEEEEEEEEECTT
T ss_pred CCCEEEEEcCChH
Confidence 9999999987553
No 53
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.53 E-value=1.5e-07 Score=81.36 Aligned_cols=111 Identities=14% Similarity=0.084 Sum_probs=70.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..+..++ ++. ..+|+..|+... +. +..+++.... +.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~--------~~~--------~~~v~~vD~s~~----------~~-~~a~~~~~~~----~~ 127 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLL--------LPL--------FREVDMVDITED----------FL-VQAKTYLGEE----GK 127 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTT--------TTT--------CSEEEEEESCHH----------HH-HHHHHHTGGG----GG
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hhc--------CCEEEEEeCCHH----------HH-HHHHHHhhhc----CC
Confidence 46899999999999887666 321 247888887654 11 1122211100 00
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
..+..+.+++....++++++|++++..++|++.+ .++..+|+.=.+-|+
T Consensus 128 ~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~Lk 176 (241)
T 2ex4_A 128 RVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTD-------------------------------QHLAEFLRRCKGSLR 176 (241)
T ss_dssp GEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHEE
T ss_pred ceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCH-------------------------------HHHHHHHHHHHHhcC
Confidence 1122234778888889999999999999998532 122334444456677
Q ss_pred cCCeEEEEecccC
Q 024331 210 AEGRMVLTFLGRK 222 (269)
Q Consensus 210 pGG~lv~~~~g~~ 222 (269)
|||+++++.....
T Consensus 177 pgG~l~i~~~~~~ 189 (241)
T 2ex4_A 177 PNGIIVIKDNMAQ 189 (241)
T ss_dssp EEEEEEEEEEEBS
T ss_pred CCeEEEEEEccCC
Confidence 9999999876554
No 54
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.53 E-value=1.4e-07 Score=87.37 Aligned_cols=111 Identities=18% Similarity=0.221 Sum_probs=73.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcC-CCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~ 128 (269)
.+.+|+|+|||+|..+..++ +++ |..+++..|+|.- +.. .+++.. .+.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~~--------~~~----a~~~~~~~~~---- 227 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCV--------QYN-------KEVEVTIVDLPQQ--------LEM----MRKQTAGLSG---- 227 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHH--------HHS-------TTCEEEEEECHHH--------HHH----HHHHHTTCTT----
T ss_pred CCCEEEEeCCCcCHHHHHHH--------HhC-------CCCEEEEEeCHHH--------HHH----HHHHHHhcCc----
Confidence 45799999999999988777 654 6789999998532 221 222211 111
Q ss_pred ceEEeecCCCccCC--CCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh
Q 024331 129 QCFFTGVPGSFYGR--LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (269)
Q Consensus 129 ~~f~~~vpgSFy~~--lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 206 (269)
.-.+..+.++|+.. ++| +++|++++...||.++. .+...+|+.=++
T Consensus 228 ~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~-------------------------------~~~~~~l~~~~~ 275 (363)
T 3dp7_A 228 SERIHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSE-------------------------------EEVISILTRVAQ 275 (363)
T ss_dssp GGGEEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCH-------------------------------HHHHHHHHHHHH
T ss_pred ccceEEEEccccccCCCCC-CCcCEEEEechhhhCCH-------------------------------HHHHHHHHHHHH
Confidence 11233355999885 578 89999999999984221 233344444456
Q ss_pred hhccCCeEEEEecccCC
Q 024331 207 ELVAEGRMVLTFLGRKS 223 (269)
Q Consensus 207 EL~pGG~lv~~~~g~~~ 223 (269)
-|+|||++++.....++
T Consensus 276 ~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 276 SIGKDSKVYIMETLWDR 292 (363)
T ss_dssp HCCTTCEEEEEECCTTS
T ss_pred hcCCCcEEEEEeeccCC
Confidence 78899999998766654
No 55
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.53 E-value=1.7e-06 Score=78.08 Aligned_cols=113 Identities=19% Similarity=0.233 Sum_probs=72.2
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
.+..+|+|+|||+|..+..++ +++ |..+++..|++ . . +....+...+ .+.. .
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~-~-~------~~~a~~~~~~-~~~~----~ 215 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVA--------QHN-------PNAEIFGVDWA-S-V------LEVAKENARI-QGVA----S 215 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHH--------HHC-------TTCEEEEEECH-H-H------HHHHHHHHHH-HTCG----G
T ss_pred CCCCEEEEECCCcCHHHHHHH--------HHC-------CCCeEEEEecH-H-H------HHHHHHHHHh-cCCC----c
Confidence 456899999999998877666 543 56899999987 3 2 2111111111 1110 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
+ +..+.+++....+|++ +|++++...+|..+. .+...+|+.=++-|
T Consensus 216 ~--v~~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L 261 (335)
T 2r3s_A 216 R--YHTIAGSAFEVDYGND-YDLVLLPNFLHHFDV-------------------------------ATCEQLLRKIKTAL 261 (335)
T ss_dssp G--EEEEESCTTTSCCCSC-EEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred c--eEEEecccccCCCCCC-CcEEEEcchhccCCH-------------------------------HHHHHHHHHHHHhC
Confidence 1 2224488888777776 999999999986421 12333444435667
Q ss_pred ccCCeEEEEecccCC
Q 024331 209 VAEGRMVLTFLGRKS 223 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~ 223 (269)
+|||++++..+...+
T Consensus 262 ~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 262 AVEGKVIVFDFIPNS 276 (335)
T ss_dssp EEEEEEEEEECCCCT
T ss_pred CCCcEEEEEeecCCC
Confidence 899999998876654
No 56
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.52 E-value=1.8e-07 Score=85.20 Aligned_cols=116 Identities=9% Similarity=0.135 Sum_probs=68.2
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHh---cCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASG 125 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~---~~~~~~ 125 (269)
+...+|+|+|||+|..+..++ +. ...+|+..|+... ++.. ++++ .+....
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~--------~~--------~~~~v~GiD~S~~----------~l~~-A~~~~~~~~~~~~ 99 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYF--------YG--------EIALLVATDPDAD----------AIAR-GNERYNKLNSGIK 99 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHH--------HT--------TCSEEEEEESCHH----------HHHH-HHHHHHHHCC---
T ss_pred CCCCeEEEEecCCcHhHHHHH--------hc--------CCCeEEEEECCHH----------HHHH-HHHHHHhcccccc
Confidence 346799999999998766443 21 2368999998876 3321 2211 111000
Q ss_pred CC-Cc-eEEe-ecCCCccC----CCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHH
Q 024331 126 AA-GQ-CFFT-GVPGSFYG----RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFS 198 (269)
Q Consensus 126 ~~-~~-~f~~-~vpgSFy~----~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~ 198 (269)
.. -. -|.. -+-++-+. ..+|++++|++.|.+++||+-..+. ..
T Consensus 100 ~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~------------------------------~~ 149 (302)
T 2vdw_A 100 TKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRH------------------------------YA 149 (302)
T ss_dssp -CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTT------------------------------HH
T ss_pred ccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHH------------------------------HH
Confidence 00 00 1333 23333321 2478899999999999999633211 12
Q ss_pred HHHhhhhhhhccCCeEEEEeccc
Q 024331 199 LFLKCRSEELVAEGRMVLTFLGR 221 (269)
Q Consensus 199 ~FL~~Ra~EL~pGG~lv~~~~g~ 221 (269)
.+|+.=++-|||||+++++++.+
T Consensus 150 ~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 150 TVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECH
T ss_pred HHHHHHHHHcCCCCEEEEEeCCH
Confidence 33333367788999999998743
No 57
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.52 E-value=8.2e-08 Score=85.15 Aligned_cols=114 Identities=14% Similarity=0.142 Sum_probs=73.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHh---cCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQ---LGSASGA 126 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~---~~~~~~~ 126 (269)
++.+|+|+|||+|..++.++ ++ ..+|+..|+... +. +..+++ .+.....
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~----------~l-~~a~~~~~~~~~~~~~ 108 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLV--------EE---------GFSVTSVDASDK----------ML-KYALKERWNRRKEPAF 108 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHH--------HT---------TCEEEEEESCHH----------HH-HHHHHHHHHTTTSHHH
T ss_pred CCCEEEEecCCCCHHHHHHH--------HC---------CCeEEEEECCHH----------HH-HHHHHhhhhccccccc
Confidence 35799999999999887776 32 248999998764 11 111111 0100000
Q ss_pred CCceEEeecCCCccCCC---CCCCceeeEecc-ccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 024331 127 AGQCFFTGVPGSFYGRL---FPRNSVHLFHSS-YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLK 202 (269)
Q Consensus 127 ~~~~f~~~vpgSFy~~l---fP~~Svd~~~Ss-~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 202 (269)
..-.+.. +++.... ++++++|++++. .++|++...... ..++..+|+
T Consensus 109 ~~~~~~~---~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~--------------------------~~~~~~~l~ 159 (293)
T 3thr_A 109 DKWVIEE---ANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD--------------------------QSEHRLALK 159 (293)
T ss_dssp HTCEEEE---CCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS--------------------------SHHHHHHHH
T ss_pred ceeeEee---cChhhCccccccCCCeEEEEEcChHHhhcCccccC--------------------------HHHHHHHHH
Confidence 0012333 6666655 899999999998 899987653321 134556666
Q ss_pred hhhhhhccCCeEEEEecc
Q 024331 203 CRSEELVAEGRMVLTFLG 220 (269)
Q Consensus 203 ~Ra~EL~pGG~lv~~~~g 220 (269)
.=++-|+|||+++++...
T Consensus 160 ~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 160 NIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHHTEEEEEEEEEEEEC
T ss_pred HHHHHcCCCeEEEEEeCC
Confidence 667889999999998753
No 58
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.51 E-value=2.5e-07 Score=79.56 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=68.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
+.+|+|+|||+|..+..++ + +..+|+..|+... +. +..+++..... ..-
T Consensus 67 ~~~vLDiGcG~G~~~~~l~--------~---------~~~~v~gvD~s~~----------~~-~~a~~~~~~~~---~~~ 115 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMA--------S---------PERFVVGLDISES----------AL-AKANETYGSSP---KAE 115 (235)
T ss_dssp CEEEEEETCTTCHHHHHHC--------B---------TTEEEEEECSCHH----------HH-HHHHHHHTTSG---GGG
T ss_pred CCCEEEeCCCCCHHHHHHH--------h---------CCCeEEEEECCHH----------HH-HHHHHHhhccC---CCc
Confidence 4699999999999887664 2 3478999998654 11 11222211100 011
Q ss_pred EEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~p 210 (269)
.+..+.+++.... |+.++|+++++.++||++. .|...+|+.=++-|+|
T Consensus 116 ~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~Lkp 163 (235)
T 3lcc_A 116 YFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEP-------------------------------EMRPAWAKSMYELLKP 163 (235)
T ss_dssp GEEEECCCTTTCC-CSSCEEEEEEESSTTTSCG-------------------------------GGHHHHHHHHHHHEEE
T ss_pred ceEEEECchhcCC-CCCCeeEEEEChhhhcCCH-------------------------------HHHHHHHHHHHHHCCC
Confidence 1233447777744 7779999999999999631 0112233333556779
Q ss_pred CCeEEEEecccC
Q 024331 211 EGRMVLTFLGRK 222 (269)
Q Consensus 211 GG~lv~~~~g~~ 222 (269)
||++++......
T Consensus 164 gG~l~~~~~~~~ 175 (235)
T 3lcc_A 164 DGELITLMYPIT 175 (235)
T ss_dssp EEEEEEEECCCS
T ss_pred CcEEEEEEeccc
Confidence 999999877654
No 59
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.51 E-value=5.5e-07 Score=82.31 Aligned_cols=112 Identities=12% Similarity=0.132 Sum_probs=74.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..+..++ +++ |..+++..|+|.- +....+...+ .+. .-
T Consensus 180 ~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~~--------~~~a~~~~~~-~~~------~~ 229 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVL--------RRH-------PQLTGQIWDLPTT--------RDAARKTIHA-HDL------GG 229 (352)
T ss_dssp CCEEEEETCTTCHHHHHHH--------HHC-------TTCEEEEEECGGG--------HHHHHHHHHH-TTC------GG
T ss_pred CCEEEEeCCCcCHHHHHHH--------HhC-------CCCeEEEEECHHH--------HHHHHHHHHh-cCC------CC
Confidence 6899999999999888777 554 6689999999642 2221111111 111 11
Q ss_pred EEeecCCCccCCC-CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 131 FFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 131 f~~~vpgSFy~~l-fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.+..+.++|+... ++++++|+++++..+|+++. .+...+|+.=++-|+
T Consensus 230 ~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~-------------------------------~~~~~~l~~~~~~L~ 278 (352)
T 3mcz_A 230 RVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDA-------------------------------REAREVIGHAAGLVK 278 (352)
T ss_dssp GEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHTEE
T ss_pred ceEEEeCCcccCcccCCCCccEEEEecccccCCH-------------------------------HHHHHHHHHHHHHcC
Confidence 2333558888755 35567999999999997422 233445555567788
Q ss_pred cCCeEEEEecccCC
Q 024331 210 AEGRMVLTFLGRKS 223 (269)
Q Consensus 210 pGG~lv~~~~g~~~ 223 (269)
|||++++.....++
T Consensus 279 pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 279 PGGALLILTMTMND 292 (352)
T ss_dssp EEEEEEEEEECCCT
T ss_pred CCCEEEEEEeccCC
Confidence 99999998876654
No 60
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.49 E-value=8.5e-08 Score=85.40 Aligned_cols=47 Identities=17% Similarity=0.105 Sum_probs=34.7
Q ss_pred CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccCCeEEEEec
Q 024331 144 FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFL 219 (269)
Q Consensus 144 fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~ 219 (269)
+|++++|+++|+.+|||++.- ..|+..+|+.=++-|||||+|+++..
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~-----------------------------~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPD-----------------------------LASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSS-----------------------------HHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCCCCCEEEehhhhhhhcCC-----------------------------HHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 567889999999999996431 12444455555788889999999753
No 61
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.48 E-value=1.4e-06 Score=78.96 Aligned_cols=108 Identities=18% Similarity=0.168 Sum_probs=69.2
Q ss_pred eEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCceE
Q 024331 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCF 131 (269)
Q Consensus 52 ~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f 131 (269)
.+|+|+|||+|..+..++ +++ |..+++..|+|.- +....+.+.+. +.. .+
T Consensus 169 ~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~~--------~~~a~~~~~~~-~~~----~~-- 218 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAIL--------QAE-------PSARGVMLDREGS--------LGVARDNLSSL-LAG----ER-- 218 (334)
T ss_dssp CEEEEETCTTCHHHHHHH--------HHC-------TTCEEEEEECTTC--------THHHHHHTHHH-HHT----TS--
T ss_pred CEEEEeCCCchHHHHHHH--------HHC-------CCCEEEEeCcHHH--------HHHHHHHHhhc-CCC----Cc--
Confidence 899999999998877766 543 5689999999443 22221111111 100 11
Q ss_pred EeecCCCccCCCCCCCceeeEecccccc-ccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 024331 132 FTGVPGSFYGRLFPRNSVHLFHSSYSLQ-WLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (269)
Q Consensus 132 ~~~vpgSFy~~lfP~~Svd~~~Ss~alH-WLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~p 210 (269)
+..+.++|+. .+| +++|++++...+| | | + .+...+|+.=++-|+|
T Consensus 219 v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~----~-----------------~-----------~~~~~~l~~~~~~L~p 264 (334)
T 2ip2_A 219 VSLVGGDMLQ-EVP-SNGDIYLLSRIIGDL----D-----------------E-----------AASLRLLGNCREAMAG 264 (334)
T ss_dssp EEEEESCTTT-CCC-SSCSEEEEESCGGGC----C-----------------H-----------HHHHHHHHHHHHHSCT
T ss_pred EEEecCCCCC-CCC-CCCCEEEEchhccCC----C-----------------H-----------HHHHHHHHHHHHhcCC
Confidence 2234488888 577 6899999999998 6 1 1 1123334433566779
Q ss_pred CCeEEEEecccCC
Q 024331 211 EGRMVLTFLGRKS 223 (269)
Q Consensus 211 GG~lv~~~~g~~~ 223 (269)
||++++.....++
T Consensus 265 gG~l~i~e~~~~~ 277 (334)
T 2ip2_A 265 DGRVVVIERTISA 277 (334)
T ss_dssp TCEEEEEECCBCS
T ss_pred CCEEEEEEeccCC
Confidence 9999999776654
No 62
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.47 E-value=3.9e-07 Score=76.71 Aligned_cols=100 Identities=13% Similarity=0.117 Sum_probs=66.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcc-eEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEF-QVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~-qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
...+|+|+|||+|..+..+ .. +++..|+... +. +..+++. . .
T Consensus 36 ~~~~vLdiG~G~G~~~~~l--------------------~~~~v~~vD~s~~----------~~-~~a~~~~-~-----~ 78 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL--------------------PYPQKVGVEPSEA----------ML-AVGRRRA-P-----E 78 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC--------------------CCSEEEEECCCHH----------HH-HHHHHHC-T-----T
T ss_pred CCCeEEEECCCCCHhHHhC--------------------CCCeEEEEeCCHH----------HH-HHHHHhC-C-----C
Confidence 5679999999999865533 14 7888887553 21 1222221 1 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
-.++. +++....+|++++|+++++.++||+.+ + ..+|+.=.+-|
T Consensus 79 ~~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~------------------~---------------~~~l~~~~~~L 122 (211)
T 2gs9_A 79 ATWVR---AWGEALPFPGESFDVVLLFTTLEFVED------------------V---------------ERVLLEARRVL 122 (211)
T ss_dssp SEEEC---CCTTSCCSCSSCEEEEEEESCTTTCSC------------------H---------------HHHHHHHHHHE
T ss_pred cEEEE---cccccCCCCCCcEEEEEEcChhhhcCC------------------H---------------HHHHHHHHHHc
Confidence 23333 677777899999999999999999632 1 12222225667
Q ss_pred ccCCeEEEEecccC
Q 024331 209 VAEGRMVLTFLGRK 222 (269)
Q Consensus 209 ~pGG~lv~~~~g~~ 222 (269)
+|||+++++.+.+.
T Consensus 123 ~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 123 RPGGALVVGVLEAL 136 (211)
T ss_dssp EEEEEEEEEEECTT
T ss_pred CCCCEEEEEecCCc
Confidence 79999999987654
No 63
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.47 E-value=4.2e-07 Score=80.49 Aligned_cols=107 Identities=17% Similarity=0.211 Sum_probs=68.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ ++ ..+|+..|.... .+......... .+.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~--------~~---------g~~v~~vD~s~~-------~~~~a~~~~~~-~~~------- 167 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLS--------LL---------GYDVTSWDHNEN-------SIAFLNETKEK-ENL------- 167 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHH--------HT---------TCEEEEEESCHH-------HHHHHHHHHHH-TTC-------
T ss_pred CCCcEEEECCCCCHHHHHHH--------HC---------CCeEEEEECCHH-------HHHHHHHHHHH-cCC-------
Confidence 46799999999999988776 32 268899997654 01111111111 111
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
-+..+.+++....+ ++++|+++++.++||++. .++..+|+.=.+-|+
T Consensus 168 -~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~Lk 214 (286)
T 3m70_A 168 -NISTALYDINAANI-QENYDFIVSTVVFMFLNR-------------------------------ERVPSIIKNMKEHTN 214 (286)
T ss_dssp -CEEEEECCGGGCCC-CSCEEEEEECSSGGGSCG-------------------------------GGHHHHHHHHHHTEE
T ss_pred -ceEEEEeccccccc-cCCccEEEEccchhhCCH-------------------------------HHHHHHHHHHHHhcC
Confidence 22223377777666 889999999999999732 122234444466788
Q ss_pred cCCeEEEEeccc
Q 024331 210 AEGRMVLTFLGR 221 (269)
Q Consensus 210 pGG~lv~~~~g~ 221 (269)
|||++++.....
T Consensus 215 pgG~l~i~~~~~ 226 (286)
T 3m70_A 215 VGGYNLIVAAMS 226 (286)
T ss_dssp EEEEEEEEEEBC
T ss_pred CCcEEEEEEecC
Confidence 999988766544
No 64
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.47 E-value=2.3e-06 Score=73.89 Aligned_cols=122 Identities=18% Similarity=0.250 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhH
Q 024331 31 IAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLA 110 (269)
Q Consensus 31 ~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~ 110 (269)
....++++.+.... .+++.+|+|+|||+|..++.++ ++ ..+|+..|+... . +.
T Consensus 25 ~~~~~~~~~~~~~~---~~~~~~vLDlGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~-~------l~ 77 (252)
T 1wzn_A 25 AEIDFVEEIFKEDA---KREVRRVLDLACGTGIPTLELA--------ER---------GYEVVGLDLHEE-M------LR 77 (252)
T ss_dssp HHHHHHHHHHHHTC---SSCCCEEEEETCTTCHHHHHHH--------HT---------TCEEEEEESCHH-H------HH
T ss_pred HHHHHHHHHHHHhc---ccCCCEEEEeCCCCCHHHHHHH--------HC---------CCeEEEEECCHH-H------HH
Confidence 33445555444332 2345799999999999888766 32 258999997654 0 11
Q ss_pred HHHHHHHHhcCCCCCCCCceEEeecCCCccCCCCCCCceeeEeccc-cccccccCCCCCCCCCcceEEcCCCCHHHHHHH
Q 024331 111 SFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAY 189 (269)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfP~~Svd~~~Ss~-alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay 189 (269)
...+.... .+. .-.++. +++....++ +++|++++.. .+|+++
T Consensus 78 ~a~~~~~~-~~~-----~v~~~~---~d~~~~~~~-~~fD~v~~~~~~~~~~~--------------------------- 120 (252)
T 1wzn_A 78 VARRKAKE-RNL-----KIEFLQ---GDVLEIAFK-NEFDAVTMFFSTIMYFD--------------------------- 120 (252)
T ss_dssp HHHHHHHH-TTC-----CCEEEE---SCGGGCCCC-SCEEEEEECSSGGGGSC---------------------------
T ss_pred HHHHHHHh-cCC-----ceEEEE---CChhhcccC-CCccEEEEcCCchhcCC---------------------------
Confidence 11111111 111 113333 777776655 6899999863 344421
Q ss_pred HHHHHHHHHHHHhhhhhhhccCCeEEEEecc
Q 024331 190 YEQFQRDFSLFLKCRSEELVAEGRMVLTFLG 220 (269)
Q Consensus 190 ~~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~g 220 (269)
..|...+|+.=++-|+|||++++.+..
T Consensus 121 ----~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 121 ----EEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp ----HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ----HHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 023445555556778899999987754
No 65
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.45 E-value=6.2e-07 Score=75.00 Aligned_cols=122 Identities=15% Similarity=0.016 Sum_probs=75.9
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
....+|+|+|||+|..++.++ +.. +. +|+..|+... +. +..+++... . ..
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~--------~~~-------~~-~v~~~D~s~~----------~~-~~a~~~~~~-~--~~ 90 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELF--------LGG-------FP-NVTSVDYSSV----------VV-AAMQACYAH-V--PQ 90 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHH--------HTT-------CC-CEEEEESCHH----------HH-HHHHHHTTT-C--TT
T ss_pred CCCCeEEEECCCCcHHHHHHH--------HcC-------CC-cEEEEeCCHH----------HH-HHHHHhccc-C--CC
Confidence 346799999999999988766 321 22 7888887543 11 222222211 0 01
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
-.++. +++....+|++++|++++..++|.+........ . .. .....+...+|+.=.+-|
T Consensus 91 i~~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~-------~---~~--------~~~~~~~~~~l~~~~~~L 149 (215)
T 2pxx_A 91 LRWET---MDVRKLDFPSASFDVVLEKGTLDALLAGERDPW-------T---VS--------SEGVHTVDQVLSEVSRVL 149 (215)
T ss_dssp CEEEE---CCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTT-------S---CC--------HHHHHHHHHHHHHHHHHE
T ss_pred cEEEE---cchhcCCCCCCcccEEEECcchhhhcccccccc-------c---cc--------cchhHHHHHHHHHHHHhC
Confidence 13333 677777889999999999998887642211100 0 00 012356667777777889
Q ss_pred ccCCeEEEEeccc
Q 024331 209 VAEGRMVLTFLGR 221 (269)
Q Consensus 209 ~pGG~lv~~~~g~ 221 (269)
+|||++++..++.
T Consensus 150 kpgG~li~~~~~~ 162 (215)
T 2pxx_A 150 VPGGRFISMTSAA 162 (215)
T ss_dssp EEEEEEEEEESCC
T ss_pred cCCCEEEEEeCCC
Confidence 9999999988765
No 66
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.44 E-value=7.2e-07 Score=73.83 Aligned_cols=105 Identities=16% Similarity=0.173 Sum_probs=65.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
+.+|+|+|||+|..+..++ ++ ..+|+..|+...- +....+.... .+. .+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~~~-------~~~a~~~~~~-~~~-----~~- 81 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLA--------AN---------GYDVDAWDKNAMS-------IANVERIKSI-ENL-----DN- 81 (199)
T ss_dssp SCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESCHHH-------HHHHHHHHHH-HTC-----TT-
T ss_pred CCeEEEEcCCCCHHHHHHH--------HC---------CCeEEEEECCHHH-------HHHHHHHHHh-CCC-----CC-
Confidence 4699999999999887766 32 2588898875430 1111111111 111 12
Q ss_pred EEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~p 210 (269)
+..+.+++....+ ++++|+++++.++||++. .+...+|+.=.+-|+|
T Consensus 82 -~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L~~ 128 (199)
T 2xvm_A 82 -LHTRVVDLNNLTF-DRQYDFILSTVVLMFLEA-------------------------------KTIPGLIANMQRCTKP 128 (199)
T ss_dssp -EEEEECCGGGCCC-CCCEEEEEEESCGGGSCG-------------------------------GGHHHHHHHHHHTEEE
T ss_pred -cEEEEcchhhCCC-CCCceEEEEcchhhhCCH-------------------------------HHHHHHHHHHHHhcCC
Confidence 2223367777766 889999999999999642 1122334433567889
Q ss_pred CCeEEEEec
Q 024331 211 EGRMVLTFL 219 (269)
Q Consensus 211 GG~lv~~~~ 219 (269)
||++++...
T Consensus 129 gG~l~~~~~ 137 (199)
T 2xvm_A 129 GGYNLIVAA 137 (199)
T ss_dssp EEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 999877654
No 67
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.44 E-value=4.7e-07 Score=79.06 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=69.7
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
++..+|+|+|||+|..+..+. ++ ..+|+..|+... +. +..+++.. +
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~----------~~-~~a~~~~~------~ 94 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLA--------DS---------FGTVEGLELSAD----------ML-AIARRRNP------D 94 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHT--------TT---------SSEEEEEESCHH----------HH-HHHHHHCT------T
T ss_pred CCCCcEEEeCCcCCHHHHHHH--------Hc---------CCeEEEEECCHH----------HH-HHHHhhCC------C
Confidence 446899999999999887665 32 247888887543 21 22222211 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccc-cccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~-alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
-.|+. +++....+ ++++|+++++. ++||+.. ..|+..+|+.=++-
T Consensus 95 ~~~~~---~d~~~~~~-~~~fD~v~~~~~~l~~~~~------------------------------~~~~~~~l~~~~~~ 140 (263)
T 3pfg_A 95 AVLHH---GDMRDFSL-GRRFSAVTCMFSSIGHLAG------------------------------QAELDAALERFAAH 140 (263)
T ss_dssp SEEEE---CCTTTCCC-SCCEEEEEECTTGGGGSCH------------------------------HHHHHHHHHHHHHT
T ss_pred CEEEE---CChHHCCc-cCCcCEEEEcCchhhhcCC------------------------------HHHHHHHHHHHHHh
Confidence 13444 77777666 78999999998 9999522 13455566666788
Q ss_pred hccCCeEEEEec
Q 024331 208 LVAEGRMVLTFL 219 (269)
Q Consensus 208 L~pGG~lv~~~~ 219 (269)
|+|||++++...
T Consensus 141 L~pgG~l~i~~~ 152 (263)
T 3pfg_A 141 VLPDGVVVVEPW 152 (263)
T ss_dssp EEEEEEEEECCC
T ss_pred cCCCcEEEEEec
Confidence 899999999753
No 68
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.44 E-value=1.2e-06 Score=78.37 Aligned_cols=109 Identities=18% Similarity=0.166 Sum_probs=66.4
Q ss_pred ceEEEeecCCC---CcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCC
Q 024331 51 KVAIADLGCSS---GPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA 127 (269)
Q Consensus 51 ~~~IaD~GCs~---G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~ 127 (269)
.-+|+|+|||+ |..+. .+ .+++ |..+|+..|+... ++ +..+++....-
T Consensus 78 ~~~vLDlGcG~pt~G~~~~-~~-------~~~~-------p~~~v~~vD~sp~----------~l-~~Ar~~~~~~~--- 128 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHE-VA-------QSVN-------PDARVVYVDIDPM----------VL-THGRALLAKDP--- 128 (274)
T ss_dssp CCEEEEETCCSCCSSCHHH-HH-------HHHC-------TTCEEEEEESSHH----------HH-HHHHHHHTTCT---
T ss_pred CCEEEEECCCCCCCChHHH-HH-------HHhC-------CCCEEEEEECChH----------HH-HHHHHhcCCCC---
Confidence 46999999999 94332 22 1332 5689999998543 22 11222221100
Q ss_pred CceEEeecCCCccCC-----------CCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHH
Q 024331 128 GQCFFTGVPGSFYGR-----------LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRD 196 (269)
Q Consensus 128 ~~~f~~~vpgSFy~~-----------lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 196 (269)
+-.|+ .+++... .+|-+++|+++++..|||+++- . +..+.+.+
T Consensus 129 ~v~~~---~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~-~---------------~~~~l~~~------- 182 (274)
T 2qe6_A 129 NTAVF---TADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD-V---------------VDRVVGAY------- 182 (274)
T ss_dssp TEEEE---ECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT-T---------------HHHHHHHH-------
T ss_pred CeEEE---EeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcH-H---------------HHHHHHHH-------
Confidence 12344 4787642 3565789999999999997542 0 11222222
Q ss_pred HHHHHhhhhhhhccCCeEEEEecccC
Q 024331 197 FSLFLKCRSEELVAEGRMVLTFLGRK 222 (269)
Q Consensus 197 ~~~FL~~Ra~EL~pGG~lv~~~~g~~ 222 (269)
++-|+|||+|+++.+..+
T Consensus 183 --------~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 183 --------RDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp --------HHHSCTTCEEEEEEEBCS
T ss_pred --------HHhCCCCcEEEEEEecCc
Confidence 556779999999998764
No 69
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.43 E-value=4.4e-07 Score=84.40 Aligned_cols=104 Identities=14% Similarity=0.191 Sum_probs=70.7
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
....+|+|+|||+|..+..++ +++ |..+++..|+|.- +. . ... . .
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~~--------~~-------~-a~~-~---~ 246 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIV--------AKY-------PSINAINFDLPHV--------IQ-------D-APA-F---S 246 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHHH--------HT-------T-CCC-C---T
T ss_pred cCCCEEEEeCCCcCHHHHHHH--------HhC-------CCCEEEEEehHHH--------HH-------h-hhh-c---C
Confidence 346899999999999988877 654 6789999998421 11 0 000 0 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
+ +.-+.|+|+. .+|++ |++++++.||+.+. .+..++|+.=++-|
T Consensus 247 ~--v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~-------------------------------~~~~~~l~~~~~~L 290 (368)
T 3reo_A 247 G--VEHLGGDMFD-GVPKG--DAIFIKWICHDWSD-------------------------------EHCLKLLKNCYAAL 290 (368)
T ss_dssp T--EEEEECCTTT-CCCCC--SEEEEESCGGGBCH-------------------------------HHHHHHHHHHHHHS
T ss_pred C--CEEEecCCCC-CCCCC--CEEEEechhhcCCH-------------------------------HHHHHHHHHHHHHc
Confidence 2 2334599997 78876 99999999985321 22334444445678
Q ss_pred ccCCeEEEEecccCC
Q 024331 209 VAEGRMVLTFLGRKS 223 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~ 223 (269)
+|||++++.-...++
T Consensus 291 ~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 291 PDHGKVIVAEYILPP 305 (368)
T ss_dssp CTTCEEEEEECCCCS
T ss_pred CCCCEEEEEEeccCC
Confidence 899999998776554
No 70
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.43 E-value=3.2e-07 Score=84.34 Aligned_cols=109 Identities=23% Similarity=0.228 Sum_probs=72.3
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcC-CCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAA 127 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~-~~~~~~ 127 (269)
+...+|+|+|||+|..+..++ +++ |..+++..|+|.- +. +++.. .+.
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~~--------~~------~~~~~~~~~--- 230 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVL--------REH-------PGLQGVLLDRAEV--------VA------RHRLDAPDV--- 230 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHH--------HHC-------TTEEEEEEECHHH--------HT------TCCCCCGGG---
T ss_pred cCCceEEEECCccCHHHHHHH--------HHC-------CCCEEEEecCHHH--------hh------cccccccCC---
Confidence 456899999999999888777 554 6789999998532 10 00000 000
Q ss_pred CceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 128 ~~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
.-.+.-+.++|+ ..+| ++|+++++.+||..++ .+...+|+.=++-
T Consensus 231 -~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d-------------------------------~~~~~~L~~~~~~ 275 (348)
T 3lst_A 231 -AGRWKVVEGDFL-REVP--HADVHVLKRILHNWGD-------------------------------EDSVRILTNCRRV 275 (348)
T ss_dssp -TTSEEEEECCTT-TCCC--CCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHT
T ss_pred -CCCeEEEecCCC-CCCC--CCcEEEEehhccCCCH-------------------------------HHHHHHHHHHHHh
Confidence 112333458998 6677 9999999999985322 1233445544677
Q ss_pred hccCCeEEEEecccCCC
Q 024331 208 LVAEGRMVLTFLGRKSQ 224 (269)
Q Consensus 208 L~pGG~lv~~~~g~~~~ 224 (269)
|+|||++++.....++.
T Consensus 276 LkpgG~l~i~e~~~~~~ 292 (348)
T 3lst_A 276 MPAHGRVLVIDAVVPEG 292 (348)
T ss_dssp CCTTCEEEEEECCBCSS
T ss_pred cCCCCEEEEEEeccCCC
Confidence 88999999987765543
No 71
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.42 E-value=2e-06 Score=79.05 Aligned_cols=112 Identities=16% Similarity=0.227 Sum_probs=73.6
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
.+..+|+|+|||+|..+..++ +++ |..+++..|+|.- +....+.+.. .+.. .
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~~--------~~~a~~~~~~-~~~~----~ 240 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAML--------KHF-------PELDSTILNLPGA--------IDLVNENAAE-KGVA----D 240 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHH--------HHC-------TTCEEEEEECGGG--------HHHHHHHHHH-TTCT----T
T ss_pred CCCCEEEEECCcccHHHHHHH--------HHC-------CCCeEEEEecHHH--------HHHHHHHHHh-cCCC----C
Confidence 356799999999999888777 553 5689999999432 2222222221 1110 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
. +..+.++|....+|+. |+++++..+|..++ .+...+|+.=++-|
T Consensus 241 ~--v~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d-------------------------------~~~~~~l~~~~~~L 285 (359)
T 1x19_A 241 R--MRGIAVDIYKESYPEA--DAVLFCRILYSANE-------------------------------QLSTIMCKKAFDAM 285 (359)
T ss_dssp T--EEEEECCTTTSCCCCC--SEEEEESCGGGSCH-------------------------------HHHHHHHHHHHTTC
T ss_pred C--EEEEeCccccCCCCCC--CEEEEechhccCCH-------------------------------HHHHHHHHHHHHhc
Confidence 1 2234589988888876 99999999984211 23445555556778
Q ss_pred ccCCeEEEEecccCC
Q 024331 209 VAEGRMVLTFLGRKS 223 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~ 223 (269)
+|||++++.....++
T Consensus 286 ~pgG~l~i~e~~~~~ 300 (359)
T 1x19_A 286 RSGGRLLILDMVIDD 300 (359)
T ss_dssp CTTCEEEEEEECCCC
T ss_pred CCCCEEEEEecccCC
Confidence 899999888766543
No 72
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.41 E-value=5e-07 Score=73.51 Aligned_cols=101 Identities=16% Similarity=0.246 Sum_probs=66.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..+..+. ++. .+|+..|+... +. +..++. .. .-
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~--------~~~---------~~v~~vD~s~~----------~~-~~a~~~-~~-----~v 62 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLL--------EFA---------TKLYCIDINVI----------AL-KEVKEK-FD-----SV 62 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHH--------TTE---------EEEEEECSCHH----------HH-HHHHHH-CT-----TS
T ss_pred CCCeEEEECCCCCHHHHHHH--------hhc---------CeEEEEeCCHH----------HH-HHHHHh-CC-----Cc
Confidence 46799999999999988776 331 38888887543 11 112222 11 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.|+. ++ ..+|++++|+++++.++|++.+ + ..+|+.=.+-|+
T Consensus 63 ~~~~---~d---~~~~~~~~D~v~~~~~l~~~~~------------------~---------------~~~l~~~~~~L~ 103 (170)
T 3i9f_A 63 ITLS---DP---KEIPDNSVDFILFANSFHDMDD------------------K---------------QHVISEVKRILK 103 (170)
T ss_dssp EEES---SG---GGSCTTCEEEEEEESCSTTCSC------------------H---------------HHHHHHHHHHEE
T ss_pred EEEe---CC---CCCCCCceEEEEEccchhcccC------------------H---------------HHHHHHHHHhcC
Confidence 2333 44 6688999999999999998632 1 122222245677
Q ss_pred cCCeEEEEecccCC
Q 024331 210 AEGRMVLTFLGRKS 223 (269)
Q Consensus 210 pGG~lv~~~~g~~~ 223 (269)
|||++++..+....
T Consensus 104 pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 104 DDGRVIIIDWRKEN 117 (170)
T ss_dssp EEEEEEEEEECSSC
T ss_pred CCCEEEEEEcCccc
Confidence 99999999876653
No 73
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.41 E-value=4.4e-07 Score=84.34 Aligned_cols=104 Identities=20% Similarity=0.210 Sum_probs=71.3
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
....+|+|+|||+|..+..++ +++ |..+++..|+|.- +.. .+ . . .
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~~--------~~~----a~----~-~---~ 244 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIA--------AHY-------PTIKGVNFDLPHV--------ISE----AP----Q-F---P 244 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHHH--------HTT----CC----C-C---T
T ss_pred cCCCEEEEeCCCCCHHHHHHH--------HHC-------CCCeEEEecCHHH--------HHh----hh----h-c---C
Confidence 346899999999999888777 654 6788999998531 110 00 0 0 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
+ +.-+.|+|+. .+|++ |++++++.||..+. ++...+|+.=++-|
T Consensus 245 ~--v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d-------------------------------~~~~~~L~~~~~~L 288 (364)
T 3p9c_A 245 G--VTHVGGDMFK-EVPSG--DTILMKWILHDWSD-------------------------------QHCATLLKNCYDAL 288 (364)
T ss_dssp T--EEEEECCTTT-CCCCC--SEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHS
T ss_pred C--eEEEeCCcCC-CCCCC--CEEEehHHhccCCH-------------------------------HHHHHHHHHHHHHc
Confidence 2 2335599998 88976 99999999984211 23344455446678
Q ss_pred ccCCeEEEEecccCC
Q 024331 209 VAEGRMVLTFLGRKS 223 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~ 223 (269)
+|||++++.-...++
T Consensus 289 ~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 289 PAHGKVVLVQCILPV 303 (364)
T ss_dssp CTTCEEEEEECCBCS
T ss_pred CCCCEEEEEEeccCC
Confidence 899999998776654
No 74
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.40 E-value=4.5e-07 Score=81.08 Aligned_cols=109 Identities=17% Similarity=0.194 Sum_probs=68.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCC-CC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGA-AG 128 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~-~~ 128 (269)
+-+|+|+|||+|..+..++ ++ ..+|+..|+... +. +..+++. ..+... .+
T Consensus 83 ~~~vLDlGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~----------~~-~~a~~~~~~~~~~~~~~ 134 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFL--------DL---------GWEVTALELSTS----------VL-AAFRKRLAEAPADVRDR 134 (299)
T ss_dssp CSCEEEETCTTTTTHHHHH--------TT---------TCCEEEEESCHH----------HH-HHHHHHHHTSCHHHHTT
T ss_pred CCcEEEEeccCCHHHHHHH--------Hc---------CCeEEEEECCHH----------HH-HHHHHHHhhcccccccc
Confidence 3499999999999988777 32 267899998654 11 1122111 110000 01
Q ss_pred ceEEeecCCCccCCCCCCCceeeEe-ccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFH-SSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~-Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
-.|+. +++....+ ++++|+++ +...+||++. .|...+|+.=++-
T Consensus 135 v~~~~---~d~~~~~~-~~~fD~v~~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~ 179 (299)
T 3g2m_A 135 CTLVQ---GDMSAFAL-DKRFGTVVISSGSINELDE-------------------------------ADRRGLYASVREH 179 (299)
T ss_dssp EEEEE---CBTTBCCC-SCCEEEEEECHHHHTTSCH-------------------------------HHHHHHHHHHHHH
T ss_pred eEEEe---CchhcCCc-CCCcCEEEECCcccccCCH-------------------------------HHHHHHHHHHHHH
Confidence 12433 78887666 78999887 5678888521 2344455555677
Q ss_pred hccCCeEEEEecccC
Q 024331 208 LVAEGRMVLTFLGRK 222 (269)
Q Consensus 208 L~pGG~lv~~~~g~~ 222 (269)
|+|||+|++.++...
T Consensus 180 L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 180 LEPGGKFLLSLAMSE 194 (299)
T ss_dssp EEEEEEEEEEEECCH
T ss_pred cCCCcEEEEEeecCc
Confidence 889999999988764
No 75
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.39 E-value=5.2e-07 Score=80.27 Aligned_cols=108 Identities=12% Similarity=0.016 Sum_probs=69.6
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
.++.+|+|+|||+|..++.++ +.+ ++..+|+..|+... +. +..+++... .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~--------~~~------~~~~~v~gvD~s~~----------~~-~~a~~~~~~-~---- 70 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLM--------PLL------PEGSKYTGIDSGET----------LL-AEARELFRL-L---- 70 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHT--------TTS------CTTCEEEEEESCHH----------HH-HHHHHHHHS-S----
T ss_pred CCCCeEEEecCCCCHHHHHHH--------HhC------CCCCEEEEEECCHH----------HH-HHHHHHHHh-c----
Confidence 457899999999998887766 332 12489999998654 11 112222111 0
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
+.-+..+.+++....++ +++|++++..++|++... ..+|+.=.+-|
T Consensus 71 ~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~---------------------------------~~~l~~~~~~L 116 (284)
T 3gu3_A 71 PYDSEFLEGDATEIELN-DKYDIAICHAFLLHMTTP---------------------------------ETMLQKMIHSV 116 (284)
T ss_dssp SSEEEEEESCTTTCCCS-SCEEEEEEESCGGGCSSH---------------------------------HHHHHHHHHTE
T ss_pred CCceEEEEcchhhcCcC-CCeeEEEECChhhcCCCH---------------------------------HHHHHHHHHHc
Confidence 11223344788887775 699999999999986321 12222224678
Q ss_pred ccCCeEEEEecc
Q 024331 209 VAEGRMVLTFLG 220 (269)
Q Consensus 209 ~pGG~lv~~~~g 220 (269)
+|||.+++..+.
T Consensus 117 kpgG~l~~~~~~ 128 (284)
T 3gu3_A 117 KKGGKIICFEPH 128 (284)
T ss_dssp EEEEEEEEEECC
T ss_pred CCCCEEEEEecc
Confidence 899999998876
No 76
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.39 E-value=9.2e-07 Score=79.46 Aligned_cols=115 Identities=14% Similarity=0.067 Sum_probs=73.5
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAA 127 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~ 127 (269)
....+|+|+|||+|..++.++ .. ..|..+|+..|+... +. +..+++. ..+.
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la--------~~------~~~~~~v~gvD~s~~----------~~-~~a~~~~~~~~~--- 168 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALD--------YS------ACPGVQLVGIDYDPE----------AL-DGATRLAAGHAL--- 168 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSC--------CT------TCTTCEEEEEESCHH----------HH-HHHHHHHTTSTT---
T ss_pred CCCCEEEEecCCCCHHHHHHH--------Hh------cCCCCeEEEEECCHH----------HH-HHHHHHHHhcCC---
Confidence 346899999999998877553 11 236789999998554 21 1222221 1111
Q ss_pred CceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 128 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 128 ~~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
.--+..+.+++....++ +++|+++++..+|++.. +. ....||+.=.+-
T Consensus 169 -~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~-------------------~~-----------~~~~~l~~~~~~ 216 (305)
T 3ocj_A 169 -AGQITLHRQDAWKLDTR-EGYDLLTSNGLNIYEPD-------------------DA-----------RVTELYRRFWQA 216 (305)
T ss_dssp -GGGEEEEECCGGGCCCC-SCEEEEECCSSGGGCCC-------------------HH-----------HHHHHHHHHHHH
T ss_pred -CCceEEEECchhcCCcc-CCeEEEEECChhhhcCC-------------------HH-----------HHHHHHHHHHHh
Confidence 11122234889998888 99999999999998532 11 112233333566
Q ss_pred hccCCeEEEEecccCC
Q 024331 208 LVAEGRMVLTFLGRKS 223 (269)
Q Consensus 208 L~pGG~lv~~~~g~~~ 223 (269)
|+|||+++++.+.+..
T Consensus 217 LkpgG~l~i~~~~~~~ 232 (305)
T 3ocj_A 217 LKPGGALVTSFLTPPP 232 (305)
T ss_dssp EEEEEEEEEECCCCCT
T ss_pred cCCCeEEEEEecCCCC
Confidence 7899999999887653
No 77
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.39 E-value=1.8e-06 Score=76.26 Aligned_cols=108 Identities=16% Similarity=0.218 Sum_probs=67.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (269)
...+|+|+|||+|..+..++ +++ + .+|+..|+..+ +. +..+++. ..+. ..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~--------~~~-------~-~~v~gvd~s~~----------~~-~~a~~~~~~~~~--~~ 114 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAV--------EKY-------D-VNVVGLTLSKN----------QA-NHVQQLVANSEN--LR 114 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH-------C-CEEEEEESCHH----------HH-HHHHHHHHTCCC--CS
T ss_pred CcCEEEEECCcccHHHHHHH--------HHc-------C-CEEEEEECCHH----------HH-HHHHHHHHhcCC--CC
Confidence 45799999999999888776 443 1 48899997654 11 1122111 1111 01
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
++ ..+.+++.. +| +++|+++|..++|++.. .|+..+|+.=.+-|
T Consensus 115 ~~--~~~~~d~~~--~~-~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L 158 (287)
T 1kpg_A 115 SK--RVLLAGWEQ--FD-EPVDRIVSIGAFEHFGH-------------------------------ERYDAFFSLAHRLL 158 (287)
T ss_dssp CE--EEEESCGGG--CC-CCCSEEEEESCGGGTCT-------------------------------TTHHHHHHHHHHHS
T ss_pred Ce--EEEECChhh--CC-CCeeEEEEeCchhhcCh-------------------------------HHHHHHHHHHHHhc
Confidence 22 122366644 45 89999999999998632 11223333335678
Q ss_pred ccCCeEEEEecccC
Q 024331 209 VAEGRMVLTFLGRK 222 (269)
Q Consensus 209 ~pGG~lv~~~~g~~ 222 (269)
+|||++++..+...
T Consensus 159 kpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 159 PADGVMLLHTITGL 172 (287)
T ss_dssp CTTCEEEEEEEEEC
T ss_pred CCCCEEEEEEecCC
Confidence 89999999988764
No 78
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.38 E-value=2.4e-06 Score=72.78 Aligned_cols=106 Identities=16% Similarity=0.206 Sum_probs=68.6
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
++..+|+|+|||+|..+..+. ++. + +|+..|+... +. +..+++. . +
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~--------~~~-------~--~v~~~D~s~~----------~~-~~a~~~~-~-----~ 84 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFT--------KEF-------G--DTAGLELSED----------ML-THARKRL-P-----D 84 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHH--------HHH-------S--EEEEEESCHH----------HH-HHHHHHC-T-----T
T ss_pred CCCCeEEEecccCCHHHHHHH--------HhC-------C--cEEEEeCCHH----------HH-HHHHHhC-C-----C
Confidence 346799999999999988776 443 2 7888886543 21 2222221 1 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccc-cccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~-alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
-.++. +++....+ ++++|+++|+. ++||+.. ..|+..+|+.=.+-
T Consensus 85 ~~~~~---~d~~~~~~-~~~~D~v~~~~~~~~~~~~------------------------------~~~~~~~l~~~~~~ 130 (239)
T 3bxo_A 85 ATLHQ---GDMRDFRL-GRKFSAVVSMFSSVGYLKT------------------------------TEELGAAVASFAEH 130 (239)
T ss_dssp CEEEE---CCTTTCCC-SSCEEEEEECTTGGGGCCS------------------------------HHHHHHHHHHHHHT
T ss_pred CEEEE---CCHHHccc-CCCCcEEEEcCchHhhcCC------------------------------HHHHHHHHHHHHHh
Confidence 13333 67776655 78999999544 8888532 02445566665778
Q ss_pred hccCCeEEEEecccC
Q 024331 208 LVAEGRMVLTFLGRK 222 (269)
Q Consensus 208 L~pGG~lv~~~~g~~ 222 (269)
|+|||++++......
T Consensus 131 L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 131 LEPGGVVVVEPWWFP 145 (239)
T ss_dssp EEEEEEEEECCCCCT
T ss_pred cCCCeEEEEEeccCc
Confidence 889999999865443
No 79
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.36 E-value=1.3e-06 Score=80.71 Aligned_cols=107 Identities=16% Similarity=0.133 Sum_probs=70.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ ++ +..+|+..|+. . . +....+... ..+..- .-
T Consensus 66 ~~~~VLDvGcG~G~~~~~la--------~~--------g~~~v~gvD~s-~-~------l~~a~~~~~-~~~~~~---~v 117 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAA--------KA--------GARKVIGIECS-S-I------SDYAVKIVK-ANKLDH---VV 117 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HT--------TCSEEEEEECS-T-H------HHHHHHHHH-HTTCTT---TE
T ss_pred CCCEEEEEeccchHHHHHHH--------HC--------CCCEEEEECcH-H-H------HHHHHHHHH-HcCCCC---cE
Confidence 35799999999999888776 32 34699999987 4 2 211111111 122110 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.++ -+++....+|++++|+++|....+++... .++..+|+.+.+-|+
T Consensus 118 ~~~---~~d~~~~~~~~~~fD~Iis~~~~~~l~~~------------------------------~~~~~~l~~~~r~Lk 164 (349)
T 3q7e_A 118 TII---KGKVEEVELPVEKVDIIISEWMGYCLFYE------------------------------SMLNTVLHARDKWLA 164 (349)
T ss_dssp EEE---ESCTTTCCCSSSCEEEEEECCCBBTBTBT------------------------------CCHHHHHHHHHHHEE
T ss_pred EEE---ECcHHHccCCCCceEEEEEccccccccCc------------------------------hhHHHHHHHHHHhCC
Confidence 333 38888888999999999997655554221 234467778889999
Q ss_pred cCCeEEEE
Q 024331 210 AEGRMVLT 217 (269)
Q Consensus 210 pGG~lv~~ 217 (269)
|||+++..
T Consensus 165 pgG~li~~ 172 (349)
T 3q7e_A 165 PDGLIFPD 172 (349)
T ss_dssp EEEEEESC
T ss_pred CCCEEccc
Confidence 99999743
No 80
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.36 E-value=1.7e-06 Score=78.93 Aligned_cols=142 Identities=20% Similarity=0.140 Sum_probs=80.3
Q ss_pred HHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHH
Q 024331 36 TEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKI 115 (269)
Q Consensus 36 l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~ 115 (269)
|++++..+. ......+|+|+|||||..|..++ ++ +.-+|+..|+..+ ++...
T Consensus 73 l~~~l~~~~--~~~~g~~vLDiGcGTG~~t~~L~--------~~--------ga~~V~aVDvs~~----------mL~~a 124 (291)
T 3hp7_A 73 LEKALAVFN--LSVEDMITIDIGASTGGFTDVML--------QN--------GAKLVYAVDVGTN----------QLVWK 124 (291)
T ss_dssp HHHHHHHTT--CCCTTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEECSSSS----------CSCHH
T ss_pred HHHHHHhcC--CCccccEEEecCCCccHHHHHHH--------hC--------CCCEEEEEECCHH----------HHHHH
Confidence 444444432 12345799999999999998776 32 2368999999988 44332
Q ss_pred HHHhcCCCCCCCCceEEeecCCCcc---CCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHH
Q 024331 116 LRKQLGSASGAAGQCFFTGVPGSFY---GRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQ 192 (269)
Q Consensus 116 ~~~~~~~~~~~~~~~f~~~vpgSFy---~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q 192 (269)
++++ +.+-.. -..++. ..-+|..++|++++..++|++.. +.++.
T Consensus 125 ~r~~--------~rv~~~-~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl~~---------------------vL~e~--- 171 (291)
T 3hp7_A 125 LRQD--------DRVRSM-EQYNFRYAEPVDFTEGLPSFASIDVSFISLNL---------------------ILPAL--- 171 (291)
T ss_dssp HHTC--------TTEEEE-CSCCGGGCCGGGCTTCCCSEEEECCSSSCGGG---------------------THHHH---
T ss_pred HHhC--------ccccee-cccCceecchhhCCCCCCCEEEEEeeHhhHHH---------------------HHHHH---
Confidence 3321 111111 001111 11257778999999999988622 12233
Q ss_pred HHHHHHHHHhhhhhhhccCCeEEEEec-----ccCCCCC--CChhhhHHHHHHHHHHHHHHHccC
Q 024331 193 FQRDFSLFLKCRSEELVAEGRMVLTFL-----GRKSQDP--SSKECCYIWELLATALNNMVSEVT 250 (269)
Q Consensus 193 ~~~D~~~FL~~Ra~EL~pGG~lv~~~~-----g~~~~~~--~~~~~~~~~~~l~~~l~~mv~eG~ 250 (269)
++-|+|||++++.+- ++..-+. ...+.......+.++..-+.+.|+
T Consensus 172 ------------~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf 224 (291)
T 3hp7_A 172 ------------AKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGF 224 (291)
T ss_dssp ------------HHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTE
T ss_pred ------------HHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCC
Confidence 567779999999731 1111000 000111123466777777788887
No 81
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.36 E-value=5.6e-07 Score=78.83 Aligned_cols=102 Identities=17% Similarity=0.186 Sum_probs=67.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. ++ ..+|+..|+... +. +..+++.. .
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~----------~l-~~a~~~~~-------~ 98 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQ--------ER---------GFEVVLVDPSKE----------ML-EVAREKGV-------K 98 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHH--------TT---------TCEEEEEESCHH----------HH-HHHHHHTC-------S
T ss_pred CCCeEEEeCCCcCHHHHHHH--------Hc---------CCeEEEEeCCHH----------HH-HHHHhhcC-------C
Confidence 46799999999999887665 22 257889887644 21 22222211 1
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccc-cccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~-alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
.++. +++....+|++++|+++++. .+||..+ ...+|+.=.+-|
T Consensus 99 ~~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~~~---------------------------------~~~~l~~~~~~L 142 (260)
T 2avn_A 99 NVVE---AKAEDLPFPSGAFEAVLALGDVLSYVEN---------------------------------KDKAFSEIRRVL 142 (260)
T ss_dssp CEEE---CCTTSCCSCTTCEEEEEECSSHHHHCSC---------------------------------HHHHHHHHHHHE
T ss_pred CEEE---CcHHHCCCCCCCEEEEEEcchhhhcccc---------------------------------HHHHHHHHHHHc
Confidence 2444 67788889999999999975 5666322 112233335677
Q ss_pred ccCCeEEEEecccC
Q 024331 209 VAEGRMVLTFLGRK 222 (269)
Q Consensus 209 ~pGG~lv~~~~g~~ 222 (269)
+|||+++++++.+.
T Consensus 143 kpgG~l~~~~~~~~ 156 (260)
T 2avn_A 143 VPDGLLIATVDNFY 156 (260)
T ss_dssp EEEEEEEEEEEBHH
T ss_pred CCCeEEEEEeCChH
Confidence 89999999987653
No 82
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.35 E-value=9.5e-07 Score=73.84 Aligned_cols=105 Identities=16% Similarity=0.137 Sum_probs=66.1
Q ss_pred EEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCceEE
Q 024331 53 AIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFF 132 (269)
Q Consensus 53 ~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~ 132 (269)
+|+|+|||+|..+..+. +. ..+|+..|+... .+....+.+.. .+. -+
T Consensus 32 ~vLdiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~~-------~~~~a~~~~~~-~~~--------~~ 78 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLA--------SL---------GYEVTAVDQSSV-------GLAKAKQLAQE-KGV--------KI 78 (202)
T ss_dssp EEEECCCSCTHHHHHHH--------TT---------TCEEEEECSSHH-------HHHHHHHHHHH-HTC--------CE
T ss_pred CEEEECCCCCHhHHHHH--------hC---------CCeEEEEECCHH-------HHHHHHHHHHh-cCC--------ce
Confidence 99999999999887665 22 258899987543 01111111111 111 12
Q ss_pred eecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccCC
Q 024331 133 TGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEG 212 (269)
Q Consensus 133 ~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 212 (269)
..+.+++....+|++++|++++++ .|+ + ..|...+|+.=.+-|+|||
T Consensus 79 ~~~~~d~~~~~~~~~~fD~v~~~~-~~~----~----------------------------~~~~~~~l~~~~~~L~pgG 125 (202)
T 2kw5_A 79 TTVQSNLADFDIVADAWEGIVSIF-CHL----P----------------------------SSLRQQLYPKVYQGLKPGG 125 (202)
T ss_dssp EEECCBTTTBSCCTTTCSEEEEEC-CCC----C----------------------------HHHHHHHHHHHHTTCCSSE
T ss_pred EEEEcChhhcCCCcCCccEEEEEh-hcC----C----------------------------HHHHHHHHHHHHHhcCCCc
Confidence 223477777788999999999853 343 1 0233444555567788999
Q ss_pred eEEEEecccCC
Q 024331 213 RMVLTFLGRKS 223 (269)
Q Consensus 213 ~lv~~~~g~~~ 223 (269)
++++..+....
T Consensus 126 ~l~~~~~~~~~ 136 (202)
T 2kw5_A 126 VFILEGFAPEQ 136 (202)
T ss_dssp EEEEEEECTTT
T ss_pred EEEEEEecccc
Confidence 99999886643
No 83
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.34 E-value=8.4e-07 Score=76.61 Aligned_cols=138 Identities=11% Similarity=0.081 Sum_probs=78.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. +. .+ -+|+..|+..+ ++ +.++++... . .
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~--------~~-------~~-~~v~gvD~s~~----------~l-~~a~~~~~~-~----~ 107 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQ--------EA-------PI-DEHWIIECNDG----------VF-QRLRDWAPR-Q----T 107 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHH--------TS-------CE-EEEEEEECCHH----------HH-HHHHHHGGG-C----S
T ss_pred CCCeEEEEeccCCHHHHHHH--------hc-------CC-CeEEEEcCCHH----------HH-HHHHHHHHh-c----C
Confidence 45899999999998887665 21 12 38899998765 22 222222110 0 0
Q ss_pred eEEeecCCCccCC--CCCCCceeeEec-cccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh
Q 024331 130 CFFTGVPGSFYGR--LFPRNSVHLFHS-SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (269)
Q Consensus 130 ~f~~~vpgSFy~~--lfP~~Svd~~~S-s~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 206 (269)
.-+.-+-+++... .||++++|++++ .++++. .... ..++..+|+.=++
T Consensus 108 ~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~-~~~~----------------------------~~~~~~~l~~~~r 158 (236)
T 1zx0_A 108 HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSE-ETWH----------------------------THQFNFIKNHAFR 158 (236)
T ss_dssp SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBG-GGTT----------------------------THHHHHHHHTHHH
T ss_pred CCeEEEecCHHHhhcccCCCceEEEEECCcccch-hhhh----------------------------hhhHHHHHHHHHH
Confidence 1122234787776 799999999999 666522 1110 0223344554467
Q ss_pred hhccCCeEEEEecccCC---CCCCChhhhHHHHHHHHHHHHHHHccCc
Q 024331 207 ELVAEGRMVLTFLGRKS---QDPSSKECCYIWELLATALNNMVSEVTK 251 (269)
Q Consensus 207 EL~pGG~lv~~~~g~~~---~~~~~~~~~~~~~~l~~~l~~mv~eG~i 251 (269)
-|||||+|++..+.... ..... .....| -...+..|.+.|.-
T Consensus 159 ~LkpgG~l~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~l~~aGF~ 203 (236)
T 1zx0_A 159 LLKPGGVLTYCNLTSWGELMKSKYS-DITIMF--EETQVPALLEAGFR 203 (236)
T ss_dssp HEEEEEEEEECCHHHHHHHTTTTCS-CHHHHH--HHHTHHHHHHTTCC
T ss_pred hcCCCeEEEEEecCcHHHhhchhhh-hhhhhc--cHHHHHHHHHCCCC
Confidence 78899999987654321 11111 111111 24445678888874
No 84
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.34 E-value=6.1e-07 Score=76.73 Aligned_cols=104 Identities=19% Similarity=0.177 Sum_probs=67.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. ++ ...+|+..|+... +. +..+++... .+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~--------~~--------~~~~v~~vD~s~~----------~~-~~a~~~~~~-----~~ 90 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAH--------EH--------GASYVLGLDLSEK----------ML-ARARAAGPD-----TG 90 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT--------TCSEEEEEESCHH----------HH-HHHHHTSCS-----SS
T ss_pred CCCEEEEEcCcCCHHHHHHH--------HC--------CCCeEEEEcCCHH----------HH-HHHHHhccc-----CC
Confidence 45799999999999877665 32 1128888887543 21 222222111 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
+..+.+++....+|++++|+++++.++|++.. . ..+|+.=++-|+
T Consensus 91 --~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~------------------~---------------~~~l~~~~~~L~ 135 (243)
T 3bkw_A 91 --ITYERADLDKLHLPQDSFDLAYSSLALHYVED------------------V---------------ARLFRTVHQALS 135 (243)
T ss_dssp --EEEEECCGGGCCCCTTCEEEEEEESCGGGCSC------------------H---------------HHHHHHHHHHEE
T ss_pred --ceEEEcChhhccCCCCCceEEEEeccccccch------------------H---------------HHHHHHHHHhcC
Confidence 22234788888889999999999999998632 1 122222256678
Q ss_pred cCCeEEEEecc
Q 024331 210 AEGRMVLTFLG 220 (269)
Q Consensus 210 pGG~lv~~~~g 220 (269)
|||+++++...
T Consensus 136 pgG~l~~~~~~ 146 (243)
T 3bkw_A 136 PGGHFVFSTEH 146 (243)
T ss_dssp EEEEEEEEEEC
T ss_pred cCcEEEEEeCC
Confidence 99999998753
No 85
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.33 E-value=6.9e-06 Score=71.80 Aligned_cols=119 Identities=11% Similarity=0.008 Sum_probs=69.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..+..++ +++ .|..+|+..|+....+-+- ..+....+.+.. .+.. .+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~--------~~~------g~~~~v~gvD~s~~~~~~~-~~~~~a~~~~~~-~~~~----~~ 102 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLA--------DQV------GSSGHVTGIDIASPDYGAP-LTLGQAWNHLLA-GPLG----DR 102 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH------CTTCEEEEECSSCTTCCSS-SCHHHHHHHHHT-STTG----GG
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHh------CCCCEEEEEECCccccccH-HHHHHHHHHHHh-cCCC----Cc
Confidence 45799999999999988776 443 1457999999876511000 002111111111 1110 12
Q ss_pred eEEeecCCC-c--cCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh
Q 024331 130 CFFTGVPGS-F--YGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (269)
Q Consensus 130 ~f~~~vpgS-F--y~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 206 (269)
+ ..+.++ + ....||++++|+++|..++|++... . .+++...+
T Consensus 103 v--~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~------------------~---------------~~~~~~~~ 147 (275)
T 3bkx_A 103 L--TVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASA------------------N---------------ALALLFKN 147 (275)
T ss_dssp E--EEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCH------------------H---------------HHHHHHHH
T ss_pred e--EEEECChhhhccCCCCCCCEEEEEEccchhhCCCH------------------H---------------HHHHHHHH
Confidence 2 223355 4 3456788999999999999985331 0 12233334
Q ss_pred hhccCCeEEEEecccCC
Q 024331 207 ELVAEGRMVLTFLGRKS 223 (269)
Q Consensus 207 EL~pGG~lv~~~~g~~~ 223 (269)
-++|||++++..+....
T Consensus 148 l~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 148 MAAVCDHVDVAEWSMQP 164 (275)
T ss_dssp HTTTCSEEEEEEECSSC
T ss_pred HhCCCCEEEEEEecCCC
Confidence 44579999999877654
No 86
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.33 E-value=3.2e-07 Score=79.48 Aligned_cols=105 Identities=14% Similarity=0.147 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHH-------HhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEec
Q 024331 23 LVQEKVISIAKPITEEAM-------TKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLN 95 (269)
Q Consensus 23 ~~Q~~~~~~~~~~l~~ai-------~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~n 95 (269)
..|+++++...|.+.-.. .+++ ....-+|+|+|||+|..++.++ ++. |+..|+..
T Consensus 3 ~~q~~~~~~~~~~~~~~~~~~~~d~~~~f---~~~~~~vLDiGcG~G~~~~~lA--------~~~-------p~~~v~gi 64 (218)
T 3dxy_A 3 SGQEHALENYWPVMGVEFSEDMLDFPALF---GREAPVTLEIGFGMGASLVAMA--------KDR-------PEQDFLGI 64 (218)
T ss_dssp ----CHHHHHHHHHBCCCCSSCCCHHHHH---SSCCCEEEEESCTTCHHHHHHH--------HHC-------TTSEEEEE
T ss_pred HHHHHHHHHHhHHhCCCCCCCCCCHHHHc---CCCCCeEEEEeeeChHHHHHHH--------HHC-------CCCeEEEE
Confidence 357777777777664210 1111 1135699999999999988777 542 67899999
Q ss_pred CCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCCceEEeecCCCccCC---CCCCCceeeEecccccccc
Q 024331 96 DLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQCFFTGVPGSFYGR---LFPRNSVHLFHSSYSLQWL 161 (269)
Q Consensus 96 DLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~~f~~~vpgSFy~~---lfP~~Svd~~~Ss~alHWL 161 (269)
|+..+ +... ++++. ..+. .++- -+.++.... .||++|+|.+++++...|-
T Consensus 65 D~s~~----------~l~~-a~~~~~~~~l---~nv~--~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~ 118 (218)
T 3dxy_A 65 EVHSP----------GVGA-CLASAHEEGL---SNLR--VMCHDAVEVLHKMIPDNSLRMVQLFFPDPWH 118 (218)
T ss_dssp CSCHH----------HHHH-HHHHHHHTTC---SSEE--EECSCHHHHHHHHSCTTCEEEEEEESCCCCC
T ss_pred EecHH----------HHHH-HHHHHHHhCC---CcEE--EEECCHHHHHHHHcCCCChheEEEeCCCCcc
Confidence 98765 2211 11111 0111 2322 234666553 4899999999999888883
No 87
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.32 E-value=4.3e-07 Score=76.85 Aligned_cols=61 Identities=18% Similarity=0.118 Sum_probs=45.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. .+|+..|+... . -
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~--------------------~~v~~~D~s~~----------~-----------------~ 99 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR--------------------NPVHCFDLASL----------D-----------------P 99 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC--------------------SCEEEEESSCS----------S-----------------T
T ss_pred CCCeEEEECCcCCHHHHHhh--------------------ccEEEEeCCCC----------C-----------------c
Confidence 45799999999998765331 46788887765 0 1
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQW 160 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHW 160 (269)
.++. +++....+|++++|+++++.++||
T Consensus 100 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~ 127 (215)
T 2zfu_A 100 RVTV---CDMAQVPLEDESVDVAVFCLSLMG 127 (215)
T ss_dssp TEEE---SCTTSCSCCTTCEEEEEEESCCCS
T ss_pred eEEE---eccccCCCCCCCEeEEEEehhccc
Confidence 2333 566777789999999999999986
No 88
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.31 E-value=3.6e-06 Score=78.61 Aligned_cols=109 Identities=16% Similarity=0.154 Sum_probs=70.7
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
.+..+|+|+|||+|..++.++ ++ ..-+|+..|+. + . +....+... ..+..- .
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la--------~~--------g~~~V~gvD~s-~-~------~~~a~~~~~-~~~~~~---~ 113 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSA--------QA--------GARKVYAVEAT-K-M------ADHARALVK-ANNLDH---I 113 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHH--------HT--------TCSEEEEEESS-T-T------HHHHHHHHH-HTTCTT---T
T ss_pred CCCCEEEEeccCcCHHHHHHH--------hc--------CCCEEEEEccH-H-H------HHHHHHHHH-HcCCCC---e
Confidence 346899999999998888766 32 12489999987 4 2 111111111 122110 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
-.++. +++....+| +++|+++|....|++... .++..+|+.+.+-|
T Consensus 114 v~~~~---~d~~~~~~~-~~~D~Iv~~~~~~~l~~e------------------------------~~~~~~l~~~~~~L 159 (376)
T 3r0q_C 114 VEVIE---GSVEDISLP-EKVDVIISEWMGYFLLRE------------------------------SMFDSVISARDRWL 159 (376)
T ss_dssp EEEEE---SCGGGCCCS-SCEEEEEECCCBTTBTTT------------------------------CTHHHHHHHHHHHE
T ss_pred EEEEE---CchhhcCcC-CcceEEEEcChhhcccch------------------------------HHHHHHHHHHHhhC
Confidence 13333 788888888 899999997666665321 23456777888899
Q ss_pred ccCCeEEEEec
Q 024331 209 VAEGRMVLTFL 219 (269)
Q Consensus 209 ~pGG~lv~~~~ 219 (269)
+|||+|++...
T Consensus 160 kpgG~li~~~~ 170 (376)
T 3r0q_C 160 KPTGVMYPSHA 170 (376)
T ss_dssp EEEEEEESSEE
T ss_pred CCCeEEEEecC
Confidence 99999987543
No 89
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.31 E-value=4e-06 Score=69.90 Aligned_cols=110 Identities=10% Similarity=0.084 Sum_probs=67.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..|..++ +++ +++..+|+..|+.... .+ . +-
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~--------~~~-----~~~~~~v~gvD~s~~~------~~------------~-----~v 65 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVIL--------ERT-----KNYKNKIIGIDKKIMD------PI------------P-----NV 65 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHH--------HHT-----TTSCEEEEEEESSCCC------CC------------T-----TC
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHc-----CCCCceEEEEeCCccC------CC------------C-----Cc
Confidence 45799999999999988877 553 1115789999987631 00 0 11
Q ss_pred eEEeecCCCccCCC-------------------------CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHH
Q 024331 130 CFFTGVPGSFYGRL-------------------------FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPC 184 (269)
Q Consensus 130 ~f~~~vpgSFy~~l-------------------------fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~ 184 (269)
.|+. +++.... +|++++|+++|..++||... .
T Consensus 66 ~~~~---~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~--------------------~ 122 (201)
T 2plw_A 66 YFIQ---GEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGN--------------------K 122 (201)
T ss_dssp EEEE---CCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSC--------------------H
T ss_pred eEEE---ccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCC--------------------c
Confidence 2322 4555443 68899999999999888311 0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhccCCeEEEEecc
Q 024331 185 VLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLG 220 (269)
Q Consensus 185 v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~g 220 (269)
..+.+. ..+....+|+.=.+-|+|||.+++.++.
T Consensus 123 ~~d~~~--~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 123 IDDHLN--SCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCHHH--HHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 001111 1112233444335677899999997654
No 90
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.30 E-value=1.5e-06 Score=74.58 Aligned_cols=80 Identities=14% Similarity=0.079 Sum_probs=51.5
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCCc
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (269)
.-+|+|+|||+|..++.++ +++ |..+|+..|+... +.. .++++. ..+. .+
T Consensus 39 ~~~vLDiGcG~G~~~~~la--------~~~-------p~~~v~giD~s~~----------~l~-~a~~~~~~~~~---~n 89 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMA--------KQN-------PDINYIGIELFKS----------VIV-TAVQKVKDSEA---QN 89 (213)
T ss_dssp CCEEEEECCTTSHHHHHHH--------HHC-------TTSEEEEECSCHH----------HHH-HHHHHHHHSCC---SS
T ss_pred CceEEEEecCCCHHHHHHH--------HHC-------CCCCEEEEEechH----------HHH-HHHHHHHHcCC---CC
Confidence 4689999999999988776 442 6789999998665 221 111111 0111 23
Q ss_pred eEEeecCCCccCC--CCCCCceeeEecccccccc
Q 024331 130 CFFTGVPGSFYGR--LFPRNSVHLFHSSYSLQWL 161 (269)
Q Consensus 130 ~f~~~vpgSFy~~--lfP~~Svd~~~Ss~alHWL 161 (269)
+- .+-++.... .||++++|.++..++.+|.
T Consensus 90 v~--~~~~d~~~l~~~~~~~~~d~v~~~~~~p~~ 121 (213)
T 2fca_A 90 VK--LLNIDADTLTDVFEPGEVKRVYLNFSDPWP 121 (213)
T ss_dssp EE--EECCCGGGHHHHCCTTSCCEEEEESCCCCC
T ss_pred EE--EEeCCHHHHHhhcCcCCcCEEEEECCCCCc
Confidence 22 233666553 3889999999987777773
No 91
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.30 E-value=4.3e-06 Score=75.19 Aligned_cols=109 Identities=15% Similarity=0.159 Sum_probs=67.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (269)
...+|+|+|||+|..+..++ +++ ..+|+..|+... +. +..++.. ..+. ..
T Consensus 90 ~~~~vLDiGcG~G~~~~~la--------~~~--------~~~v~gvD~s~~----------~~-~~a~~~~~~~~~--~~ 140 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAV--------ERF--------DVNVIGLTLSKN----------QH-ARCEQVLASIDT--NR 140 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH--------CCEEEEEESCHH----------HH-HHHHHHHHTSCC--SS
T ss_pred CcCEEEEEcccchHHHHHHH--------HHC--------CCEEEEEECCHH----------HH-HHHHHHHHhcCC--CC
Confidence 45799999999999887766 443 158899987554 21 1122211 1111 01
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
.+ ..+.+++... | +++|++++..++|++.. .|...+|+.=.+-|
T Consensus 141 ~v--~~~~~d~~~~--~-~~fD~v~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~L 184 (318)
T 2fk8_A 141 SR--QVLLQGWEDF--A-EPVDRIVSIEAFEHFGH-------------------------------ENYDDFFKRCFNIM 184 (318)
T ss_dssp CE--EEEESCGGGC--C-CCCSEEEEESCGGGTCG-------------------------------GGHHHHHHHHHHHS
T ss_pred ce--EEEECChHHC--C-CCcCEEEEeChHHhcCH-------------------------------HHHHHHHHHHHHhc
Confidence 12 2223666553 4 89999999999998632 12223333335678
Q ss_pred ccCCeEEEEecccCC
Q 024331 209 VAEGRMVLTFLGRKS 223 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~ 223 (269)
+|||++++..+....
T Consensus 185 kpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 185 PADGRMTVQSSVSYH 199 (318)
T ss_dssp CTTCEEEEEEEECCC
T ss_pred CCCcEEEEEEeccCC
Confidence 899999999887653
No 92
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.29 E-value=2.6e-06 Score=78.87 Aligned_cols=104 Identities=17% Similarity=0.197 Sum_probs=69.8
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
++..+|+|+|||+|..+..++ +++ |.++++..|+|.- +. . . ... +
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~--------~~~-------~~~~~~~~D~~~~--------~~-------~-a-~~~---~ 252 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELII--------SKY-------PLIKGINFDLPQV--------IE-------N-A-PPL---S 252 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHHH--------HT-------T-C-CCC---T
T ss_pred CCCCEEEEeCCCCcHHHHHHH--------HHC-------CCCeEEEeChHHH--------HH-------h-h-hhc---C
Confidence 456899999999999988777 553 5688999998421 11 0 0 001 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
+ +..+.++|+. .+|. +|+++++..||++++ .+...+|+.=++-|
T Consensus 253 ~--v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d-------------------------------~~~~~~l~~~~~~L 296 (372)
T 1fp1_D 253 G--IEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD-------------------------------EKCIEFLSNCHKAL 296 (372)
T ss_dssp T--EEEEECCTTT-CCCC--EEEEEEESSGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred C--CEEEeCCccc-CCCC--CCEEEEecccccCCH-------------------------------HHHHHHHHHHHHhc
Confidence 2 3335589988 6786 899999999996422 11223444445677
Q ss_pred ccCCeEEEEecccCC
Q 024331 209 VAEGRMVLTFLGRKS 223 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~ 223 (269)
+|||++++..+..+.
T Consensus 297 ~pgG~l~i~e~~~~~ 311 (372)
T 1fp1_D 297 SPNGKVIIVEFILPE 311 (372)
T ss_dssp EEEEEEEEEEEEECS
T ss_pred CCCCEEEEEEeccCC
Confidence 899999998765543
No 93
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.29 E-value=4.1e-06 Score=71.94 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=27.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+..+|+|+|||+|..+..+. ++. +..+|+..|+...
T Consensus 57 ~g~~VLDlGcGtG~~~~~la--------~~~-------~~~~V~gvD~s~~ 92 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLA--------DIV-------DEGIIYAVEYSAK 92 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHH--------HHT-------TTSEEEEECCCHH
T ss_pred CCCEEEEECCcCCHHHHHHH--------HHc-------CCCEEEEEECCHH
Confidence 45799999999999888776 443 2368999997654
No 94
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.29 E-value=2e-06 Score=74.49 Aligned_cols=56 Identities=11% Similarity=-0.030 Sum_probs=39.2
Q ss_pred CCCccCC-CCCC---CceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccC
Q 024331 136 PGSFYGR-LFPR---NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAE 211 (269)
Q Consensus 136 pgSFy~~-lfP~---~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pG 211 (269)
.+++... ++++ +++|+++++.+||++..- ..+...+|+.=.+-|+||
T Consensus 141 ~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------~~~~~~~l~~~~~~Lkpg 191 (265)
T 2i62_A 141 KCDVTQSQPLGGVSLPPADCLLSTLCLDAACPD-----------------------------LPAYRTALRNLGSLLKPG 191 (265)
T ss_dssp ECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSS-----------------------------HHHHHHHHHHHHTTEEEE
T ss_pred EeeeccCCCCCccccCCccEEEEhhhhhhhcCC-----------------------------hHHHHHHHHHHHhhCCCC
Confidence 3666664 3466 899999999999975320 124445555557789999
Q ss_pred CeEEEEecc
Q 024331 212 GRMVLTFLG 220 (269)
Q Consensus 212 G~lv~~~~g 220 (269)
|+|+++...
T Consensus 192 G~li~~~~~ 200 (265)
T 2i62_A 192 GFLVMVDAL 200 (265)
T ss_dssp EEEEEEEES
T ss_pred cEEEEEecC
Confidence 999998753
No 95
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.29 E-value=2.9e-06 Score=72.09 Aligned_cols=80 Identities=14% Similarity=0.123 Sum_probs=51.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc-
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ- 129 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~- 129 (269)
.-+|+|+|||+|..++.++ ++. |..+|+..|+...= +........ +.+. .+
T Consensus 42 ~~~vLDiGcG~G~~~~~la--------~~~-------p~~~v~gvD~s~~~-------l~~a~~~~~-~~~~-----~~v 93 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMA--------KQN-------PDINYIGIDIQKSV-------LSYALDKVL-EVGV-----PNI 93 (214)
T ss_dssp CCEEEEESCTTSHHHHHHH--------HHC-------TTSEEEEEESCHHH-------HHHHHHHHH-HHCC-----SSE
T ss_pred CCeEEEEccCcCHHHHHHH--------HHC-------CCCCEEEEEcCHHH-------HHHHHHHHH-HcCC-----CCE
Confidence 5689999999999988776 442 57899999986540 111111111 1121 12
Q ss_pred eEEeecCCCccCCC--CCCCceeeEecccccccc
Q 024331 130 CFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWL 161 (269)
Q Consensus 130 ~f~~~vpgSFy~~l--fP~~Svd~~~Ss~alHWL 161 (269)
.++. ++..... ||++++|++++++..+|.
T Consensus 94 ~~~~---~d~~~~~~~~~~~~~D~i~~~~~~~~~ 124 (214)
T 1yzh_A 94 KLLW---VDGSDLTDYFEDGEIDRLYLNFSDPWP 124 (214)
T ss_dssp EEEE---CCSSCGGGTSCTTCCSEEEEESCCCCC
T ss_pred EEEe---CCHHHHHhhcCCCCCCEEEEECCCCcc
Confidence 2333 5665533 889999999998776663
No 96
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.29 E-value=2.4e-06 Score=69.48 Aligned_cols=79 Identities=9% Similarity=0.057 Sum_probs=49.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (269)
...+|+|+|||+|..++.++ ++ .|..+|+..|+... +. +..+++. ..+. ..
T Consensus 25 ~~~~vldiG~G~G~~~~~l~--------~~-------~~~~~v~~vD~~~~----------~~-~~a~~~~~~~~~--~~ 76 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWL--------RS-------TPQTTAVCFEISEE----------RR-ERILSNAINLGV--SD 76 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHH--------TT-------SSSEEEEEECSCHH----------HH-HHHHHHHHTTTC--TT
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HH-------CCCCeEEEEeCCHH----------HH-HHHHHHHHHhCC--CC
Confidence 45799999999999888776 33 25689999998654 11 1122111 1111 12
Q ss_pred ceEEeecCCCccCCCCCC--CceeeEeccccccc
Q 024331 129 QCFFTGVPGSFYGRLFPR--NSVHLFHSSYSLQW 160 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~--~Svd~~~Ss~alHW 160 (269)
++++. ++... .+|. +++|+++++.++||
T Consensus 77 ~~~~~---~d~~~-~~~~~~~~~D~i~~~~~~~~ 106 (178)
T 3hm2_A 77 RIAVQ---QGAPR-AFDDVPDNPDVIFIGGGLTA 106 (178)
T ss_dssp SEEEE---CCTTG-GGGGCCSCCSEEEECC-TTC
T ss_pred CEEEe---cchHh-hhhccCCCCCEEEECCcccH
Confidence 45444 55443 5555 89999999888877
No 97
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.27 E-value=2.1e-06 Score=77.03 Aligned_cols=100 Identities=9% Similarity=-0.015 Sum_probs=64.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ ++ ..+|+..|+..+ ++ +.++++... .
T Consensus 45 ~g~~VLDlGcGtG~~a~~La--------~~---------g~~V~gvD~S~~----------ml-~~Ar~~~~~------~ 90 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKAL--------ER---------GASVTVFDFSQR----------MC-DDLAEALAD------R 90 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHH--------HT---------TCEEEEEESCHH----------HH-HHHHHHTSS------S
T ss_pred CcCEEEEEeCcchHHHHHHH--------hc---------CCEEEEEECCHH----------HH-HHHHHHHHh------c
Confidence 45799999999999988777 43 258999997765 32 223333211 1
Q ss_pred eEEeecCCCccCCCC-----CCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 024331 130 CFFTGVPGSFYGRLF-----PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (269)
Q Consensus 130 ~f~~~vpgSFy~~lf-----P~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 204 (269)
+ +.+++....+ +++++|+++|+.++||+.. .+...+|+.=
T Consensus 91 -~---v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~-------------------------------~~~~~~l~~l 135 (261)
T 3iv6_A 91 -C---VTIDLLDITAEIPKELAGHFDFVLNDRLINRFTT-------------------------------EEARRACLGM 135 (261)
T ss_dssp -C---CEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCH-------------------------------HHHHHHHHHH
T ss_pred -c---ceeeeeecccccccccCCCccEEEEhhhhHhCCH-------------------------------HHHHHHHHHH
Confidence 1 2233333222 3679999999999998521 2333334443
Q ss_pred hhhhccCCeEEEEec
Q 024331 205 SEELVAEGRMVLTFL 219 (269)
Q Consensus 205 a~EL~pGG~lv~~~~ 219 (269)
++-| |||++++++.
T Consensus 136 ~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 136 LSLV-GSGTVRASVK 149 (261)
T ss_dssp HHHH-TTSEEEEEEE
T ss_pred HHhC-cCcEEEEEec
Confidence 5567 9999999874
No 98
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.27 E-value=6.4e-06 Score=77.51 Aligned_cols=108 Identities=18% Similarity=0.091 Sum_probs=69.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.+. ++ ..+|+..|.... .+......+. ..+ . .-
T Consensus 233 ~~~~VLDlGcG~G~~~~~la--------~~---------g~~V~gvDis~~-------al~~A~~n~~-~~~--~---~v 282 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLA--------RM---------GAEVVGVEDDLA-------SVLSLQKGLE-ANA--L---KA 282 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHH--------HT---------TCEEEEEESBHH-------HHHHHHHHHH-HTT--C---CC
T ss_pred CCCEEEEEeeeCCHHHHHHH--------Hc---------CCEEEEEECCHH-------HHHHHHHHHH-HcC--C---Ce
Confidence 45799999999999998877 32 258999987443 1111111111 111 1 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
-|+. +++...+++++++|+++|+..+||-..... .+...|++.=.+-|+
T Consensus 283 ~~~~---~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~----------------------------~~~~~~l~~~~~~Lk 331 (381)
T 3dmg_A 283 QALH---SDVDEALTEEARFDIIVTNPPFHVGGAVIL----------------------------DVAQAFVNVAAARLR 331 (381)
T ss_dssp EEEE---CSTTTTSCTTCCEEEEEECCCCCTTCSSCC----------------------------HHHHHHHHHHHHHEE
T ss_pred EEEE---cchhhccccCCCeEEEEECCchhhcccccH----------------------------HHHHHHHHHHHHhcC
Confidence 3333 788888888899999999999988332211 233445555556677
Q ss_pred cCCeEEEEe
Q 024331 210 AEGRMVLTF 218 (269)
Q Consensus 210 pGG~lv~~~ 218 (269)
|||+++++.
T Consensus 332 pGG~l~iv~ 340 (381)
T 3dmg_A 332 PGGVFFLVS 340 (381)
T ss_dssp EEEEEEEEE
T ss_pred cCcEEEEEE
Confidence 999999975
No 99
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.26 E-value=2.3e-06 Score=71.91 Aligned_cols=101 Identities=20% Similarity=0.181 Sum_probs=63.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
.+.+|+|+|||+|..+..+. ++ ..+|+..|+... + .+..+++ + ..
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~~----------~-~~~a~~~-~------~~ 96 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALA--------DR---------GIEAVGVDGDRT----------L-VDAARAA-G------AG 96 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHH--------TT---------TCEEEEEESCHH----------H-HHHHHHT-C------SS
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HC---------CCEEEEEcCCHH----------H-HHHHHHh-c------cc
Confidence 35899999999998887665 22 358899987643 2 1223322 1 12
Q ss_pred eEEeecCCCccCC---CCCC-CceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 024331 130 CFFTGVPGSFYGR---LFPR-NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (269)
Q Consensus 130 ~f~~~vpgSFy~~---lfP~-~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 205 (269)
.+.. +++... .++. +++|+++++.++|+ +. +. .+|+.=.
T Consensus 97 ~~~~---~~~~~~~~~~~~~~~~fD~v~~~~~l~~----~~---------------~~---------------~~l~~~~ 139 (227)
T 3e8s_A 97 EVHL---ASYAQLAEAKVPVGKDYDLICANFALLH----QD---------------II---------------ELLSAMR 139 (227)
T ss_dssp CEEE---CCHHHHHTTCSCCCCCEEEEEEESCCCS----SC---------------CH---------------HHHHHHH
T ss_pred ccch---hhHHhhcccccccCCCccEEEECchhhh----hh---------------HH---------------HHHHHHH
Confidence 3444 333332 4444 45999999999992 11 11 1222235
Q ss_pred hhhccCCeEEEEecccC
Q 024331 206 EELVAEGRMVLTFLGRK 222 (269)
Q Consensus 206 ~EL~pGG~lv~~~~g~~ 222 (269)
+-|+|||+++++.+...
T Consensus 140 ~~L~pgG~l~~~~~~~~ 156 (227)
T 3e8s_A 140 TLLVPGGALVIQTLHPW 156 (227)
T ss_dssp HTEEEEEEEEEEECCTT
T ss_pred HHhCCCeEEEEEecCcc
Confidence 67889999999988664
No 100
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.26 E-value=3e-06 Score=80.88 Aligned_cols=129 Identities=12% Similarity=0.061 Sum_probs=82.5
Q ss_pred CCceEEEeecCC------CCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCC
Q 024331 49 PTKVAIADLGCS------SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS 122 (269)
Q Consensus 49 ~~~~~IaD~GCs------~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~ 122 (269)
.++.+|+|+||| +|..|+.++ +++ .|..+|+..|+..+ +. ....
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la--------~~~------fP~a~V~GVDiSp~----------m~------~~~~ 264 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMW--------KSF------FPRGQIYGLDIMDK----------SH------VDEL 264 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHH--------HHH------CTTCEEEEEESSCC----------GG------GCBT
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHH--------HHh------CCCCEEEEEECCHH----------Hh------hcCC
Confidence 357899999999 888888776 443 15689999999887 11 0111
Q ss_pred CCCCCCceEEeecCCCccCCCCC------CCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHH
Q 024331 123 ASGAAGQCFFTGVPGSFYGRLFP------RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRD 196 (269)
Q Consensus 123 ~~~~~~~~f~~~vpgSFy~~lfP------~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 196 (269)
+-.|+. |+.....|+ ++++|+++|..+ |+. .|
T Consensus 265 -----rI~fv~---GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~---------------------------------~d 302 (419)
T 3sso_A 265 -----RIRTIQ---GDQNDAEFLDRIARRYGPFDIVIDDGS-HIN---------------------------------AH 302 (419)
T ss_dssp -----TEEEEE---CCTTCHHHHHHHHHHHCCEEEEEECSC-CCH---------------------------------HH
T ss_pred -----CcEEEE---ecccccchhhhhhcccCCccEEEECCc-ccc---------------------------------hh
Confidence 123444 788887777 799999999654 441 12
Q ss_pred HHHHHhhhhhhhccCCeEEEEecccCC----CCCCC--hhhhHHHHHHHHHHHHHHHcc
Q 024331 197 FSLFLKCRSEELVAEGRMVLTFLGRKS----QDPSS--KECCYIWELLATALNNMVSEV 249 (269)
Q Consensus 197 ~~~FL~~Ra~EL~pGG~lv~~~~g~~~----~~~~~--~~~~~~~~~l~~~l~~mv~eG 249 (269)
+.++|+.=.+-|||||++++.-+-..- ++... .....+.+.++..+..+-.+-
T Consensus 303 ~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~~ 361 (419)
T 3sso_A 303 VRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQE 361 (419)
T ss_dssp HHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcccc
Confidence 233444446788999999998665221 11110 112345677777777776553
No 101
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.26 E-value=1e-06 Score=76.00 Aligned_cols=108 Identities=16% Similarity=0.146 Sum_probs=66.2
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
....+|+|+|||+|.++..++ +.. + +|+..|+... +. +..+++.... +
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la--------~~~-------~--~v~gvD~s~~----------~~-~~a~~~~~~~----~ 102 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLS--------QFF-------P--RVIGLDVSKS----------AL-EIAAKENTAA----N 102 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHH--------HHS-------S--CEEEEESCHH----------HH-HHHHHHSCCT----T
T ss_pred CCCCeEEEEcCCCCHHHHHHH--------HhC-------C--CEEEEECCHH----------HH-HHHHHhCccc----C
Confidence 345789999999999998877 442 2 7888887543 21 2222222110 1
Q ss_pred ceEEeecCCCccCCCCCC-----CceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhh
Q 024331 129 QCFFTGVPGSFYGRLFPR-----NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~-----~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 203 (269)
-.|+. +++....++. .++|+++++.++||++. .|...+|+.
T Consensus 103 ~~~~~---~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~-------------------------------~~~~~~l~~ 148 (245)
T 3ggd_A 103 ISYRL---LDGLVPEQAAQIHSEIGDANIYMRTGFHHIPV-------------------------------EKRELLGQS 148 (245)
T ss_dssp EEEEE---CCTTCHHHHHHHHHHHCSCEEEEESSSTTSCG-------------------------------GGHHHHHHH
T ss_pred ceEEE---CcccccccccccccccCccEEEEcchhhcCCH-------------------------------HHHHHHHHH
Confidence 23433 6666644332 34899999999999632 011222332
Q ss_pred hhhhhccCCeEEEEecccC
Q 024331 204 RSEELVAEGRMVLTFLGRK 222 (269)
Q Consensus 204 Ra~EL~pGG~lv~~~~g~~ 222 (269)
=.+-|+|||++++..++..
T Consensus 149 ~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 149 LRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp HHHHHTTTCEEEEEEECTT
T ss_pred HHHHcCCCCEEEEEeCCcc
Confidence 3566779999999887654
No 102
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.26 E-value=3.6e-06 Score=77.83 Aligned_cols=109 Identities=15% Similarity=0.217 Sum_probs=73.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
..-+|+|+|||+|..++.++ +++ |.++++.-|+|.- +.. .++..... ..
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~--------~~~-------p~~~~~~~dlp~v--------~~~----a~~~~~~~----~~ 227 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECM--------SLY-------PGCKITVFDIPEV--------VWT----AKQHFSFQ----EE 227 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHH--------HHC-------SSCEEEEEECHHH--------HHH----HHHHSCC------C
T ss_pred cCCeEEeeCCCCCHHHHHHH--------HhC-------CCceeEeccCHHH--------HHH----HHHhhhhc----cc
Confidence 44699999999999888777 765 7889999998753 222 22221110 01
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccccc-ccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQ-WLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alH-WLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
-.+..++|+|+..++|. .|+++....|| | ++ .+..++|+.=++-|
T Consensus 228 ~rv~~~~gD~~~~~~~~--~D~~~~~~vlh~~-~d-------------------------------~~~~~iL~~~~~al 273 (353)
T 4a6d_A 228 EQIDFQEGDFFKDPLPE--ADLYILARVLHDW-AD-------------------------------GKCSHLLERIYHTC 273 (353)
T ss_dssp CSEEEEESCTTTSCCCC--CSEEEEESSGGGS-CH-------------------------------HHHHHHHHHHHHHC
T ss_pred CceeeecCccccCCCCC--ceEEEeeeecccC-CH-------------------------------HHHHHHHHHHHhhC
Confidence 12444679999887765 59999999999 5 11 22334455446678
Q ss_pred ccCCeEEEEecccCC
Q 024331 209 VAEGRMVLTFLGRKS 223 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~ 223 (269)
+|||++++.-...++
T Consensus 274 ~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 274 KPGGGILVIESLLDE 288 (353)
T ss_dssp CTTCEEEEEECCCCT
T ss_pred CCCCEEEEEEeeeCC
Confidence 899999998776654
No 103
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.26 E-value=3.6e-06 Score=68.92 Aligned_cols=104 Identities=19% Similarity=0.225 Sum_probs=67.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. +. ..+++..|.... . .+..+++. . +-
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~~D~~~~----------~-~~~a~~~~-~-----~~ 91 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLS--------KQ---------GHDVLGTDLDPI----------L-IDYAKQDF-P-----EA 91 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHH--------HT---------TCEEEEEESCHH----------H-HHHHHHHC-T-----TS
T ss_pred CCCeEEEECCCCCHHHHHHH--------HC---------CCcEEEEcCCHH----------H-HHHHHHhC-C-----CC
Confidence 46799999999999887666 32 257888886543 1 11122221 1 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEecc-ccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSS-YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss-~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
.++. +++....+|++++|+++++ ..+|+++. .+...+|+.=.+-|
T Consensus 92 ~~~~---~d~~~~~~~~~~~D~i~~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~l 137 (195)
T 3cgg_A 92 RWVV---GDLSVDQISETDFDLIVSAGNVMGFLAE-------------------------------DGREPALANIHRAL 137 (195)
T ss_dssp EEEE---CCTTTSCCCCCCEEEEEECCCCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred cEEE---cccccCCCCCCceeEEEECCcHHhhcCh-------------------------------HHHHHHHHHHHHHh
Confidence 3333 6777777889999999997 66776421 12344455446677
Q ss_pred ccCCeEEEEeccc
Q 024331 209 VAEGRMVLTFLGR 221 (269)
Q Consensus 209 ~pGG~lv~~~~g~ 221 (269)
+|||++++.....
T Consensus 138 ~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 138 GADGRAVIGFGAG 150 (195)
T ss_dssp EEEEEEEEEEETT
T ss_pred CCCCEEEEEeCCC
Confidence 8999999987544
No 104
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.23 E-value=2.6e-06 Score=78.30 Aligned_cols=108 Identities=19% Similarity=0.226 Sum_probs=67.5
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
.+..+|+|+|||+|..++.++ +++ |..+++..|+ .. . +....+.... .+.. .
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------~~~~~~~~D~-~~-~------~~~a~~~~~~-~~~~----~ 232 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIA--------LRA-------PHLRGTLVEL-AG-P------AERARRRFAD-AGLA----D 232 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEEC-HH-H------HHHHHHHHHH-TTCT----T
T ss_pred CCCCEEEEECCCcCHHHHHHH--------HHC-------CCCEEEEEeC-HH-H------HHHHHHHHHh-cCCC----C
Confidence 346899999999998877766 543 5689999998 32 1 2221111211 1110 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
+ +..+.++|.. .+|.+ +|++++...+|+.++ .+...+|+.=.+-|
T Consensus 233 ~--v~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~-------------------------------~~~~~~l~~~~~~L 277 (374)
T 1qzz_A 233 R--VTVAEGDFFK-PLPVT-ADVVLLSFVLLNWSD-------------------------------EDALTILRGCVRAL 277 (374)
T ss_dssp T--EEEEECCTTS-CCSCC-EEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHE
T ss_pred c--eEEEeCCCCC-cCCCC-CCEEEEeccccCCCH-------------------------------HHHHHHHHHHHHhc
Confidence 2 2224488876 56765 999999999986321 11223333335677
Q ss_pred ccCCeEEEEec
Q 024331 209 VAEGRMVLTFL 219 (269)
Q Consensus 209 ~pGG~lv~~~~ 219 (269)
+|||++++...
T Consensus 278 ~pgG~l~i~e~ 288 (374)
T 1qzz_A 278 EPGGRLLVLDR 288 (374)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCcEEEEEec
Confidence 89999999877
No 105
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.23 E-value=5e-06 Score=71.00 Aligned_cols=105 Identities=23% Similarity=0.324 Sum_probs=65.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..+..++ + . .+|+..|+... .+....+.... .+. .-.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~--------~--------~--~~v~~vD~s~~-------~~~~a~~~~~~-~~~-----~~~ 82 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLA--------D--------H--YEVTGVDLSEE-------MLEIAQEKAME-TNR-----HVD 82 (243)
T ss_dssp TCEEEEESCTTCHHHHHHT--------T--------T--SEEEEEESCHH-------HHHHHHHHHHH-TTC-----CCE
T ss_pred CCeEEEecCCCCHHHHHHh--------h--------C--CeEEEEECCHH-------HHHHHHHhhhh-cCC-----ceE
Confidence 4799999999999877655 1 1 57888887554 01111111111 111 113
Q ss_pred EEeecCCCccCCCCCCCceeeEeccc-cccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSY-SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~-alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
++. +++....+| +++|++++.. ++||+.. ..+...+|+.=++-|+
T Consensus 83 ~~~---~d~~~~~~~-~~fD~v~~~~~~~~~~~~------------------------------~~~~~~~l~~~~~~L~ 128 (243)
T 3d2l_A 83 FWV---QDMRELELP-EPVDAITILCDSLNYLQT------------------------------EADVKQTFDSAARLLT 128 (243)
T ss_dssp EEE---CCGGGCCCS-SCEEEEEECTTGGGGCCS------------------------------HHHHHHHHHHHHHHEE
T ss_pred EEE---cChhhcCCC-CCcCEEEEeCCchhhcCC------------------------------HHHHHHHHHHHHHhcC
Confidence 333 677776666 8999999987 8888521 0234445554467788
Q ss_pred cCCeEEEEecc
Q 024331 210 AEGRMVLTFLG 220 (269)
Q Consensus 210 pGG~lv~~~~g 220 (269)
|||++++.+..
T Consensus 129 pgG~l~~~~~~ 139 (243)
T 3d2l_A 129 DGGKLLFDVHS 139 (243)
T ss_dssp EEEEEEEEEEC
T ss_pred CCeEEEEEcCC
Confidence 99999997643
No 106
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.22 E-value=5.9e-06 Score=70.30 Aligned_cols=95 Identities=14% Similarity=0.163 Sum_probs=61.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..+..+.+. +..|.... + .+..+++ +. .
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~---------------------~~vD~s~~----------~-~~~a~~~---~~-----~ 87 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK---------------------IGVEPSER----------M-AEIARKR---GV-----F 87 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC---------------------EEEESCHH----------H-HHHHHHT---TC-----E
T ss_pred CCcEEEeCCCCCHHHHHHHHH---------------------hccCCCHH----------H-HHHHHhc---CC-----E
Confidence 579999999999998765411 44554332 1 1112221 11 2
Q ss_pred EEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~p 210 (269)
++. +++....++++++|++++..++|++.+ +. .+|+.=.+-|+|
T Consensus 88 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~------------------~~---------------~~l~~~~~~L~p 131 (219)
T 1vlm_A 88 VLK---GTAENLPLKDESFDFALMVTTICFVDD------------------PE---------------RALKEAYRILKK 131 (219)
T ss_dssp EEE---CBTTBCCSCTTCEEEEEEESCGGGSSC------------------HH---------------HHHHHHHHHEEE
T ss_pred EEE---cccccCCCCCCCeeEEEEcchHhhccC------------------HH---------------HHHHHHHHHcCC
Confidence 333 677777789999999999999999632 11 122222456779
Q ss_pred CCeEEEEeccc
Q 024331 211 EGRMVLTFLGR 221 (269)
Q Consensus 211 GG~lv~~~~g~ 221 (269)
||.++++.+..
T Consensus 132 gG~l~i~~~~~ 142 (219)
T 1vlm_A 132 GGYLIVGIVDR 142 (219)
T ss_dssp EEEEEEEEECS
T ss_pred CcEEEEEEeCC
Confidence 99999998754
No 107
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.20 E-value=3e-06 Score=71.33 Aligned_cols=99 Identities=12% Similarity=0.105 Sum_probs=66.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..+..+. ++ + .+++..|.... + .+..++. . .
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~--------~~--------~-~~~~~~D~~~~----------~-~~~~~~~----~----~ 75 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIK--------EN--------G-TRVSGIEAFPE----------A-AEQAKEK----L----D 75 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------TT--------T-CEEEEEESSHH----------H-HHHHHTT----S----S
T ss_pred CCCcEEEeCCCCCHHHHHHH--------hc--------C-CeEEEEeCCHH----------H-HHHHHHh----C----C
Confidence 56899999999999887665 21 3 68888887543 1 1112211 1 1
Q ss_pred eEEeecCCCccC--CCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 130 CFFTGVPGSFYG--RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 130 ~f~~~vpgSFy~--~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
-++. +++.. ..+|++++|+++++.++|++.. + ..+|+.=.+-
T Consensus 76 ~~~~---~d~~~~~~~~~~~~fD~v~~~~~l~~~~~------------------~---------------~~~l~~~~~~ 119 (230)
T 3cc8_A 76 HVVL---GDIETMDMPYEEEQFDCVIFGDVLEHLFD------------------P---------------WAVIEKVKPY 119 (230)
T ss_dssp EEEE---SCTTTCCCCSCTTCEEEEEEESCGGGSSC------------------H---------------HHHHHHTGGG
T ss_pred cEEE---cchhhcCCCCCCCccCEEEECChhhhcCC------------------H---------------HHHHHHHHHH
Confidence 2333 56654 6788899999999999998632 1 1334444677
Q ss_pred hccCCeEEEEecc
Q 024331 208 LVAEGRMVLTFLG 220 (269)
Q Consensus 208 L~pGG~lv~~~~g 220 (269)
|+|||.++++.+.
T Consensus 120 L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 120 IKQNGVILASIPN 132 (230)
T ss_dssp EEEEEEEEEEEEC
T ss_pred cCCCCEEEEEeCC
Confidence 8999999999765
No 108
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.20 E-value=5.6e-06 Score=68.83 Aligned_cols=110 Identities=17% Similarity=0.090 Sum_probs=66.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ ++ +..+|+..|+... .+....+.+.. .+.. .-
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~--------~~--------~~~~v~~vD~~~~-------~~~~a~~~~~~-~~~~----~v 95 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEAL--------SR--------GAASVLFVESDQR-------SAAVIARNIEA-LGLS----GA 95 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT--------TCSEEEEEECCHH-------HHHHHHHHHHH-HTCS----CE
T ss_pred CCCEEEEeCCCcCHHHHHHH--------HC--------CCCeEEEEECCHH-------HHHHHHHHHHH-cCCC----ce
Confidence 45799999999999888665 22 2357999998654 11111111111 1210 11
Q ss_pred eEEeecCCCccCCC--CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh-
Q 024331 130 CFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE- 206 (269)
Q Consensus 130 ~f~~~vpgSFy~~l--fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~- 206 (269)
.++. +++...+ ++++++|++++...+||. ..++..+|+.-.+
T Consensus 96 ~~~~---~d~~~~~~~~~~~~fD~i~~~~p~~~~--------------------------------~~~~~~~l~~~~~~ 140 (189)
T 3p9n_A 96 TLRR---GAVAAVVAAGTTSPVDLVLADPPYNVD--------------------------------SADVDAILAALGTN 140 (189)
T ss_dssp EEEE---SCHHHHHHHCCSSCCSEEEECCCTTSC--------------------------------HHHHHHHHHHHHHS
T ss_pred EEEE---ccHHHHHhhccCCCccEEEECCCCCcc--------------------------------hhhHHHHHHHHHhc
Confidence 3433 6766543 468899999996555551 0233333433333
Q ss_pred -hhccCCeEEEEecccC
Q 024331 207 -ELVAEGRMVLTFLGRK 222 (269)
Q Consensus 207 -EL~pGG~lv~~~~g~~ 222 (269)
-|+|||++++....+.
T Consensus 141 ~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 141 GWTREGTVAVVERATTC 157 (189)
T ss_dssp SSCCTTCEEEEEEETTS
T ss_pred CccCCCeEEEEEecCCC
Confidence 8999999999887654
No 109
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.19 E-value=8.6e-06 Score=67.11 Aligned_cols=116 Identities=14% Similarity=0.173 Sum_probs=61.8
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
.+..+|+|+|||+|..|+.++ ++ ..+|+..|+... .+....+... +.+. .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la--------~~---------~~~v~~vD~s~~-------~l~~a~~~~~-~~~~-----~ 70 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLA--------GL---------SKKVYAFDVQEQ-------ALGKTSQRLS-DLGI-----E 70 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHH--------TT---------SSEEEEEESCHH-------HHHHHHHHHH-HHTC-----C
T ss_pred CCCCEEEEEcCCCCHHHHHHH--------Hh---------CCEEEEEECCHH-------HHHHHHHHHH-HcCC-----C
Confidence 346799999999999998777 32 378999997654 0111111111 1121 1
Q ss_pred c-eEEeecCCCccCCC-CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh
Q 024331 129 Q-CFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (269)
Q Consensus 129 ~-~f~~~vpgSFy~~l-fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 206 (269)
+ .|+. +++.... ++++++|+++++ ++|+......+. .. ..+...+|+.=.+
T Consensus 71 ~v~~~~---~~~~~l~~~~~~~fD~v~~~--~~~~~~~~~~~~-----------~~-----------~~~~~~~l~~~~~ 123 (185)
T 3mti_A 71 NTELIL---DGHENLDHYVREPIRAAIFN--LGYLPSADKSVI-----------TK-----------PHTTLEAIEKILD 123 (185)
T ss_dssp CEEEEE---SCGGGGGGTCCSCEEEEEEE--EC----------------------C-----------HHHHHHHHHHHHH
T ss_pred cEEEEe---CcHHHHHhhccCCcCEEEEe--CCCCCCcchhcc-----------cC-----------hhhHHHHHHHHHH
Confidence 2 2333 5554422 568899999875 344432111110 01 1222334444456
Q ss_pred hhccCCeEEEEeccc
Q 024331 207 ELVAEGRMVLTFLGR 221 (269)
Q Consensus 207 EL~pGG~lv~~~~g~ 221 (269)
-|+|||++++.....
T Consensus 124 ~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 124 RLEVGGRLAIMIYYG 138 (185)
T ss_dssp HEEEEEEEEEEEC--
T ss_pred hcCCCcEEEEEEeCC
Confidence 788999999987643
No 110
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.18 E-value=4.3e-07 Score=85.10 Aligned_cols=104 Identities=12% Similarity=0.091 Sum_probs=66.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. ++ ..+|+..|+..+ +. +..+++ +... ...
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~--------~~---------g~~v~gvD~s~~----------~~-~~a~~~-~~~~--~~~ 155 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQ--------EA---------GVRHLGFEPSSG----------VA-AKAREK-GIRV--RTD 155 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHH--------HT---------TCEEEEECCCHH----------HH-HHHHTT-TCCE--ECS
T ss_pred CCCEEEEecCCCCHHHHHHH--------Hc---------CCcEEEECCCHH----------HH-HHHHHc-CCCc--cee
Confidence 46799999999999877665 32 258999998665 22 112221 2110 001
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.|. .++.....++++++|+++|+.++||+.+ ...||+.=++-|+
T Consensus 156 ~~~---~~~~~~l~~~~~~fD~I~~~~vl~h~~d---------------------------------~~~~l~~~~r~Lk 199 (416)
T 4e2x_A 156 FFE---KATADDVRRTEGPANVIYAANTLCHIPY---------------------------------VQSVLEGVDALLA 199 (416)
T ss_dssp CCS---HHHHHHHHHHHCCEEEEEEESCGGGCTT---------------------------------HHHHHHHHHHHEE
T ss_pred eec---hhhHhhcccCCCCEEEEEECChHHhcCC---------------------------------HHHHHHHHHHHcC
Confidence 111 1333344578899999999999999632 2233333356777
Q ss_pred cCCeEEEEecc
Q 024331 210 AEGRMVLTFLG 220 (269)
Q Consensus 210 pGG~lv~~~~g 220 (269)
|||+|++....
T Consensus 200 pgG~l~i~~~~ 210 (416)
T 4e2x_A 200 PDGVFVFEDPY 210 (416)
T ss_dssp EEEEEEEEEEC
T ss_pred CCeEEEEEeCC
Confidence 99999998764
No 111
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.18 E-value=4.7e-06 Score=76.28 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=68.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..+..++ +++ |.++++..|+| . . +....+.... .+.. .+
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~--------~~~-------~~~~~~~~D~~-~-~------~~~a~~~~~~-~~~~----~~ 234 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIA--------RRA-------PHVSATVLEMA-G-T------VDTARSYLKD-EGLS----DR 234 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECT-T-H------HHHHHHHHHH-TTCT----TT
T ss_pred cCcEEEEeCCcCcHHHHHHH--------HhC-------CCCEEEEecCH-H-H------HHHHHHHHHh-cCCC----Cc
Confidence 46799999999999888776 543 56899999993 3 2 2221111211 1110 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
+ .-+.+++.. .+|.+ +|+++++..+|..+. .+...+|+.=.+-|+
T Consensus 235 v--~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~-------------------------------~~~~~~l~~~~~~L~ 279 (360)
T 1tw3_A 235 V--DVVEGDFFE-PLPRK-ADAIILSFVLLNWPD-------------------------------HDAVRILTRCAEALE 279 (360)
T ss_dssp E--EEEECCTTS-CCSSC-EEEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHTEE
T ss_pred e--EEEeCCCCC-CCCCC-ccEEEEcccccCCCH-------------------------------HHHHHHHHHHHHhcC
Confidence 2 223478876 56765 999999999975311 122233443356788
Q ss_pred cCCeEEEEecc
Q 024331 210 AEGRMVLTFLG 220 (269)
Q Consensus 210 pGG~lv~~~~g 220 (269)
|||++++....
T Consensus 280 pgG~l~i~e~~ 290 (360)
T 1tw3_A 280 PGGRILIHERD 290 (360)
T ss_dssp EEEEEEEEECC
T ss_pred CCcEEEEEEEe
Confidence 99999998776
No 112
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.17 E-value=5.7e-06 Score=72.05 Aligned_cols=149 Identities=8% Similarity=-0.040 Sum_probs=77.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (269)
...+|+|+|||+|.++..+. +. .| -+|+..|+... + .+.+++.. ..+ .
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~--------~~-------~~-~~v~~id~~~~----------~-~~~a~~~~~~~~----~ 108 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQ--------EA-------PI-DEHWIIECNDG----------V-FQRLRDWAPRQT----H 108 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHT--------TS-------CE-EEEEEEECCHH----------H-HHHHHHHGGGCS----S
T ss_pred CCCeEEEECCCccHHHHHHH--------Hh-------CC-cEEEEEeCCHH----------H-HHHHHHHHhhCC----C
Confidence 46899999999998877655 32 23 46778887543 1 12232221 111 1
Q ss_pred ceEEeecCCCcc--CCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh
Q 024331 129 QCFFTGVPGSFY--GRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (269)
Q Consensus 129 ~~f~~~vpgSFy--~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 206 (269)
++.+. -|+.. ...+|++++|.++.-..... . ......|...||+.=+|
T Consensus 109 ~~~~~--~~~a~~~~~~~~~~~FD~i~~D~~~~~-------~---------------------~~~~~~~~~~~~~e~~r 158 (236)
T 3orh_A 109 KVIPL--KGLWEDVAPTLPDGHFDGILYDTYPLS-------E---------------------ETWHTHQFNFIKNHAFR 158 (236)
T ss_dssp EEEEE--ESCHHHHGGGSCTTCEEEEEECCCCCB-------G---------------------GGTTTHHHHHHHHTHHH
T ss_pred ceEEE--eehHHhhcccccccCCceEEEeeeecc-------c---------------------chhhhcchhhhhhhhhh
Confidence 22222 24443 34589999999964111000 0 00012456667776688
Q ss_pred hhccCCeEEEEecccCC---CCCCChhhhHHHHHHHHHHHHHHHccCcccccccceeccc
Q 024331 207 ELVAEGRMVLTFLGRKS---QDPSSKECCYIWELLATALNNMVSEVTKSFLLLIVFNQLN 263 (269)
Q Consensus 207 EL~pGG~lv~~~~g~~~---~~~~~~~~~~~~~~l~~~l~~mv~eG~i~~~~~d~FnlP~ 263 (269)
.|||||+|++....... ...+.. ...+ ..+.....|.+.|+-. +.++.-.++.
T Consensus 159 vLkPGG~l~f~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~L~eaGF~~-~~i~~~~~~l 214 (236)
T 3orh_A 159 LLKPGGVLTYCNLTSWGELMKSKYSD-ITIM--FEETQVPALLEAGFRR-ENIRTEVMAL 214 (236)
T ss_dssp HEEEEEEEEECCHHHHHHHTTTTCSC-HHHH--HHHHTHHHHHHHTCCG-GGEEEEEEEC
T ss_pred eeCCCCEEEEEecCCchhhhhhhhhh-hhhh--hHHHHHHHHHHcCCeE-EEEEEEeecc
Confidence 99999999875432211 111111 1111 2344556777788632 3334434433
No 113
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.16 E-value=6e-06 Score=75.77 Aligned_cols=103 Identities=19% Similarity=0.319 Sum_probs=67.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..+..++ +++ |..+++..|+|.- +.. .+ .. ++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~~--------~~~----a~-----~~---~~ 232 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIIC--------ETF-------PKLKCIVFDRPQV--------VEN----LS-----GS---NN 232 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHHH--------HTT----CC-----CB---TT
T ss_pred cCceEEEeCCCccHHHHHHH--------HHC-------CCCeEEEeeCHHH--------Hhh----cc-----cC---CC
Confidence 45799999999998887776 553 5688999998321 110 00 01 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
+..+.++|+. .+|+ +|+++++..||.+++ .+...+|+.=++-|+
T Consensus 233 --v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d-------------------------------~~~~~~l~~~~~~L~ 276 (352)
T 1fp2_A 233 --LTYVGGDMFT-SIPN--ADAVLLKYILHNWTD-------------------------------KDCLRILKKCKEAVT 276 (352)
T ss_dssp --EEEEECCTTT-CCCC--CSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHHS
T ss_pred --cEEEeccccC-CCCC--ccEEEeehhhccCCH-------------------------------HHHHHHHHHHHHhCC
Confidence 3335589987 6774 999999999995321 112233333356677
Q ss_pred c---CCeEEEEecccCC
Q 024331 210 A---EGRMVLTFLGRKS 223 (269)
Q Consensus 210 p---GG~lv~~~~g~~~ 223 (269)
| ||++++..+..++
T Consensus 277 p~~~gG~l~i~e~~~~~ 293 (352)
T 1fp2_A 277 NDGKRGKVTIIDMVIDK 293 (352)
T ss_dssp GGGCCCEEEEEECEECT
T ss_pred CCCCCcEEEEEEeecCC
Confidence 9 9999998876654
No 114
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.16 E-value=1.1e-06 Score=76.11 Aligned_cols=142 Identities=13% Similarity=0.050 Sum_probs=85.7
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
+.+-+|+|+|||+|+.++.++ . ..|.+++...|.... +-.+........|.. .
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~--------~-------~~p~a~~~A~Di~~~--------~leiar~~~~~~g~~----~ 100 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQW--------N-------ENEKIIYHAYDIDRA--------EIAFLSSIIGKLKTT----I 100 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHH--------C-------SSCCCEEEEECSCHH--------HHHHHHHHHHHSCCS----S
T ss_pred CCCCeEEEecCCCCHHHHHHH--------h-------cCCCCEEEEEeCCHH--------HHHHHHHHHHhcCCC----c
Confidence 457899999999999999877 2 347889999998664 111111111122221 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
++-+ .++-.. .|+.++|++.++..||-|.+.+..+. .. .+.|
T Consensus 101 ~v~~----~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~al~------------------~v---------------~~~L 142 (200)
T 3fzg_A 101 KYRF----LNKESD-VYKGTYDVVFLLKMLPVLKQQDVNIL------------------DF---------------LQLF 142 (200)
T ss_dssp EEEE----ECCHHH-HTTSEEEEEEEETCHHHHHHTTCCHH------------------HH---------------HHTC
T ss_pred cEEE----eccccc-CCCCCcChhhHhhHHHhhhhhHHHHH------------------HH---------------HHHh
Confidence 3333 333333 68899999999999999955443321 22 5678
Q ss_pred ccCCeEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHHccCcccccccceeccc
Q 024331 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEVTKSFLLLIVFNQLN 263 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~~~~~~~~~~~~~~~l~~~l~~mv~eG~i~~~~~d~FnlP~ 263 (269)
+|||+ ++++..+.=.++.-+ +.+.=...|...+.+.. +.++.+.++.
T Consensus 143 ~pggv-fISfptksl~Gr~~g----m~~~Y~~~~~~~~~~~~---~~~~~~~~~n 189 (200)
T 3fzg_A 143 HTQNF-VISFPIKSLSGKEKG----MEENYQLWFESFTKGWI---KILDSKVIGN 189 (200)
T ss_dssp EEEEE-EEEEECCCCC--CTT----CCCCHHHHHHHHTTTTS---CEEEEEEETT
T ss_pred CCCCE-EEEeChHHhcCCCcc----hhhhHHHHHHHhccCcc---eeeeeeeeCc
Confidence 89865 567774443333221 11223445666666766 6777777664
No 115
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.15 E-value=1.3e-05 Score=73.78 Aligned_cols=105 Identities=19% Similarity=0.244 Sum_probs=65.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ +. +..+|+..|.. . . +....+... ..+.. .+
T Consensus 64 ~~~~VLDiGcGtG~ls~~la--------~~--------g~~~v~gvD~s-~-~------~~~a~~~~~-~~~~~----~~ 114 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAA--------KA--------GAKKVLGVDQS-E-I------LYQAMDIIR-LNKLE----DT 114 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEESS-T-H------HHHHHHHHH-HTTCT----TT
T ss_pred CCCEEEEeeccCcHHHHHHH--------Hc--------CCCEEEEEChH-H-H------HHHHHHHHH-HcCCC----Cc
Confidence 45799999999998877665 32 23589999975 3 2 111111122 12211 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
+- .+.+++....+|++++|+++|....+-+. ...++..+|+.+.+-|+
T Consensus 115 i~--~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~------------------------------~~~~~~~~l~~~~~~Lk 162 (340)
T 2fyt_A 115 IT--LIKGKIEEVHLPVEKVDVIISEWMGYFLL------------------------------FESMLDSVLYAKNKYLA 162 (340)
T ss_dssp EE--EEESCTTTSCCSCSCEEEEEECCCBTTBT------------------------------TTCHHHHHHHHHHHHEE
T ss_pred EE--EEEeeHHHhcCCCCcEEEEEEcCchhhcc------------------------------CHHHHHHHHHHHHhhcC
Confidence 22 23377888789999999999954211110 01345577888889999
Q ss_pred cCCeEE
Q 024331 210 AEGRMV 215 (269)
Q Consensus 210 pGG~lv 215 (269)
|||+++
T Consensus 163 pgG~li 168 (340)
T 2fyt_A 163 KGGSVY 168 (340)
T ss_dssp EEEEEE
T ss_pred CCcEEE
Confidence 999998
No 116
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.15 E-value=2.2e-05 Score=62.74 Aligned_cols=110 Identities=17% Similarity=0.186 Sum_probs=69.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ +++ .|..+++..|+.. .-. + . +-
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~--------~~~------~~~~~v~~~D~~~--~~~----~------------~-----~~ 64 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVV--------TQI------GGKGRIIACDLLP--MDP----I------------V-----GV 64 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHH--------HHH------CTTCEEEEEESSC--CCC----C------------T-----TE
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HHh------CCCCeEEEEECcc--ccc----c------------C-----cE
Confidence 45699999999999888776 432 1457888888765 200 0 0 11
Q ss_pred eEEeecCCCccCCC--------CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 024331 130 CFFTGVPGSFYGRL--------FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFL 201 (269)
Q Consensus 130 ~f~~~vpgSFy~~l--------fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 201 (269)
.++. +++.... +|++++|++++...+||...... . .. ........+|
T Consensus 65 ~~~~---~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~-----------------~---~~--~~~~~~~~~l 119 (180)
T 1ej0_A 65 DFLQ---GDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAV-----------------D---IP--RAMYLVELAL 119 (180)
T ss_dssp EEEE---SCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHH-----------------H---HH--HHHHHHHHHH
T ss_pred EEEE---cccccchhhhhhhccCCCCceeEEEECCCccccCCCcc-----------------c---hH--HHHHHHHHHH
Confidence 2333 5666544 78899999999999988533100 0 00 0112234555
Q ss_pred hhhhhhhccCCeEEEEeccc
Q 024331 202 KCRSEELVAEGRMVLTFLGR 221 (269)
Q Consensus 202 ~~Ra~EL~pGG~lv~~~~g~ 221 (269)
+.=.+-|+|||.++++....
T Consensus 120 ~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 120 EMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HHHHHHEEEEEEEEEEEESS
T ss_pred HHHHHHcCCCcEEEEEEecC
Confidence 55566788999999987644
No 117
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.13 E-value=1.3e-05 Score=67.31 Aligned_cols=100 Identities=15% Similarity=0.134 Sum_probs=65.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..+..+. +. ..+|+..|.... . +....+.+. +.+ + .+
T Consensus 77 ~~~~vLdiG~G~G~~~~~la--------~~---------~~~v~~vD~~~~----~---~~~a~~~~~-~~~--~---~~ 126 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILA--------HL---------VQHVCSVERIKG----L---QWQARRRLK-NLD--L---HN 126 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HH---------SSEEEEEESCHH----H---HHHHHHHHH-HTT--C---CS
T ss_pred CCCEEEEEcCCCCHHHHHHH--------Hh---------CCEEEEEecCHH----H---HHHHHHHHH-HcC--C---Cc
Confidence 46799999999999988776 33 157888887543 0 111111111 112 1 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
+..+-++....+.+.+++|++++..++|++.+ .. .+-|+
T Consensus 127 --v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~------------------------~~---------------~~~L~ 165 (210)
T 3lbf_A 127 --VSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT------------------------AL---------------MTQLD 165 (210)
T ss_dssp --EEEEESCGGGCCGGGCCEEEEEESSBCSSCCT------------------------HH---------------HHTEE
T ss_pred --eEEEECCcccCCccCCCccEEEEccchhhhhH------------------------HH---------------HHhcc
Confidence 22233788887778899999999988887431 11 45688
Q ss_pred cCCeEEEEecc
Q 024331 210 AEGRMVLTFLG 220 (269)
Q Consensus 210 pGG~lv~~~~g 220 (269)
|||++++++..
T Consensus 166 pgG~lv~~~~~ 176 (210)
T 3lbf_A 166 EGGILVLPVGE 176 (210)
T ss_dssp EEEEEEEEECS
T ss_pred cCcEEEEEEcC
Confidence 99999999865
No 118
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.13 E-value=3e-06 Score=71.88 Aligned_cols=73 Identities=14% Similarity=0.069 Sum_probs=47.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHH---HHHHhc-CCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQK---ILRKQL-GSASG 125 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~---~~~~~~-~~~~~ 125 (269)
...+|+|+|||+|..+..++ +++ |..+|+..|+... ++.. ..+++. ..+.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la--------~~~-------p~~~v~gvD~s~~----------~l~~~~~~a~~~~~~~~~- 80 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVA--------RQN-------PSRLVVALDADKS----------RMEKISAKAAAKPAKGGL- 80 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHH--------HHC-------TTEEEEEEESCGG----------GGHHHHHHHTSCGGGTCC-
T ss_pred CCCEEEEecCCCCHHHHHHH--------HHC-------CCCEEEEEECCHH----------HHHHHHHHHHHhhhhcCC-
Confidence 46899999999999998877 543 5689999998776 2221 111111 1111
Q ss_pred CCCceEEeecCCCccCCCCCCCceeeEe
Q 024331 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFH 153 (269)
Q Consensus 126 ~~~~~f~~~vpgSFy~~lfP~~Svd~~~ 153 (269)
.+-.|+. +++....+++++ |.++
T Consensus 81 -~~v~~~~---~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 81 -PNLLYLW---ATAERLPPLSGV-GELH 103 (218)
T ss_dssp -TTEEEEE---CCSTTCCSCCCE-EEEE
T ss_pred -CceEEEe---cchhhCCCCCCC-CEEE
Confidence 0113433 888888899888 8777
No 119
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.12 E-value=4.9e-06 Score=68.65 Aligned_cols=73 Identities=19% Similarity=0.137 Sum_probs=51.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..++.++ ++ - +|+..|+... +... .. .--
T Consensus 24 ~~~vLD~GcG~G~~~~~l~--------~~---------~-~v~gvD~s~~----------~~~~------~~-----~~~ 64 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLR--------KR---------N-TVVSTDLNIR----------ALES------HR-----GGN 64 (170)
T ss_dssp SCEEEEETCTTCHHHHHHT--------TT---------S-EEEEEESCHH----------HHHT------CS-----SSC
T ss_pred CCeEEEeccCccHHHHHHH--------hc---------C-cEEEEECCHH----------HHhc------cc-----CCe
Confidence 4599999999999888766 22 1 8889987654 2211 11 113
Q ss_pred EEeecCCCccCCCCCCCceeeEeccccccccccCCC
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPD 166 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~ 166 (269)
++. +++.. .++++++|+++|+..+||.+..+.
T Consensus 65 ~~~---~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~ 96 (170)
T 3q87_B 65 LVR---ADLLC-SINQESVDVVVFNPPYVPDTDDPI 96 (170)
T ss_dssp EEE---CSTTT-TBCGGGCSEEEECCCCBTTCCCTT
T ss_pred EEE---CChhh-hcccCCCCEEEECCCCccCCcccc
Confidence 444 77777 678899999999999999776543
No 120
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.11 E-value=4.2e-06 Score=68.45 Aligned_cols=109 Identities=12% Similarity=0.111 Sum_probs=66.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ +. ..+|+..|+...= +......... .+ . .+
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~--------~~---------~~~v~~~D~~~~~-------~~~a~~~~~~-~~--~---~~ 101 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALA--------DE---------VKSTTMADINRRA-------IKLAKENIKL-NN--L---DN 101 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHG--------GG---------SSEEEEEESCHHH-------HHHHHHHHHH-TT--C---TT
T ss_pred CCCeEEEeCCCCCHHHHHHH--------Hc---------CCeEEEEECCHHH-------HHHHHHHHHH-cC--C---Cc
Confidence 45799999999998887665 21 2688888875540 1111111111 11 1 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
-.+..+.+++.. .++++++|++++...+||- ..++..+|+.=.+-|+
T Consensus 102 ~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~--------------------------------~~~~~~~l~~~~~~L~ 148 (194)
T 1dus_A 102 YDIRVVHSDLYE-NVKDRKYNKIITNPPIRAG--------------------------------KEVLHRIIEEGKELLK 148 (194)
T ss_dssp SCEEEEECSTTT-TCTTSCEEEEEECCCSTTC--------------------------------HHHHHHHHHHHHHHEE
T ss_pred cceEEEECchhc-ccccCCceEEEECCCcccc--------------------------------hhHHHHHHHHHHHHcC
Confidence 001223366666 5678899999997777760 1234445555567788
Q ss_pred cCCeEEEEeccc
Q 024331 210 AEGRMVLTFLGR 221 (269)
Q Consensus 210 pGG~lv~~~~g~ 221 (269)
|||.+++.....
T Consensus 149 ~gG~l~~~~~~~ 160 (194)
T 1dus_A 149 DNGEIWVVIQTK 160 (194)
T ss_dssp EEEEEEEEEEST
T ss_pred CCCEEEEEECCC
Confidence 999999988654
No 121
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.11 E-value=1.7e-06 Score=72.21 Aligned_cols=130 Identities=14% Similarity=0.127 Sum_probs=67.4
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
.+..+|+|+|||+|..++.++ ++. |..+|+..|+... +. +..+++... .
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~--------~~~-------~~~~v~~vD~~~~----------~~-~~a~~~~~~-~---- 77 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIA--------LAC-------PGVSVTAVDLSMD----------AL-AVARRNAER-F---- 77 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHH--------HHC-------TTEEEEEEECC------------------------------
T ss_pred CCCCEEEEecCCHhHHHHHHH--------HhC-------CCCeEEEEECCHH----------HH-HHHHHHHHH-h----
Confidence 457899999999999888777 442 5689999998665 11 111111100 0
Q ss_pred ceEEeecCCCccCCCCCC-----CceeeEeccccccccccC---CCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHH
Q 024331 129 QCFFTGVPGSFYGRLFPR-----NSVHLFHSSYSLQWLSQV---PDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLF 200 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~-----~Svd~~~Ss~alHWLS~~---P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 200 (269)
..-+..+.+++.. .+++ +++|++++.-..++.... +..+....-.....+. ......+..|
T Consensus 78 ~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 146 (215)
T 4dzr_A 78 GAVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGG----------EDGLQFYRRM 146 (215)
T ss_dssp -----CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC----------------------------------CTTHHHHHH
T ss_pred CCceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCC----------CcHHHHHHHH
Confidence 0122334467776 6776 999999997665543322 1111100000000000 0122345778
Q ss_pred HhhhhhhhccCCeEEEEecc
Q 024331 201 LKCRSEELVAEGRMVLTFLG 220 (269)
Q Consensus 201 L~~Ra~EL~pGG~lv~~~~g 220 (269)
++.=.+-|+|||++++...+
T Consensus 147 l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 147 AALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HTCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHHhcCCCeEEEEEEC
Confidence 88888999999995555444
No 122
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.11 E-value=9.4e-06 Score=70.95 Aligned_cols=72 Identities=25% Similarity=0.289 Sum_probs=48.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. +.. |..+|+..|.... +. +..++. +. .-
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~--------~~~-------~~~~v~~vD~s~~----------~~-~~a~~~-~~-----~~ 132 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFA--------DAL-------PEITTFGLDVSKV----------AI-KAAAKR-YP-----QV 132 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHH--------HTC-------TTSEEEEEESCHH----------HH-HHHHHH-CT-----TS
T ss_pred CCCEEEEECCCCCHHHHHHH--------HhC-------CCCeEEEEeCCHH----------HH-HHHHHh-CC-----Cc
Confidence 46799999999999988776 431 3468999987654 21 112222 11 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSY 156 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~ 156 (269)
.|+. +++....++++++|+++++.
T Consensus 133 ~~~~---~d~~~~~~~~~~fD~v~~~~ 156 (269)
T 1p91_A 133 TFCV---ASSHRLPFSDTSMDAIIRIY 156 (269)
T ss_dssp EEEE---CCTTSCSBCTTCEEEEEEES
T ss_pred EEEE---cchhhCCCCCCceeEEEEeC
Confidence 3433 67777789999999999854
No 123
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.09 E-value=1e-05 Score=67.80 Aligned_cols=104 Identities=13% Similarity=0.145 Sum_probs=64.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.+. +. +..+|+..|+... .+....+.... .+. .+
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~--------~~--------~~~~v~~vD~s~~-------~~~~a~~~~~~-~~~-----~~ 110 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAH--------KL--------GAKSVLATDISDE-------SMTAAEENAAL-NGI-----YD 110 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEESCHH-------HHHHHHHHHHH-TTC-----CC
T ss_pred CCCEEEEECCCCCHHHHHHH--------HC--------CCCEEEEEECCHH-------HHHHHHHHHHH-cCC-----Cc
Confidence 45799999999998877654 22 3358999998653 01111111111 111 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
+..+.+++.. ++++++|++++...+|+ +..+|+.=.+-|+
T Consensus 111 --v~~~~~d~~~--~~~~~fD~i~~~~~~~~------------------------------------~~~~l~~~~~~L~ 150 (205)
T 3grz_A 111 --IALQKTSLLA--DVDGKFDLIVANILAEI------------------------------------LLDLIPQLDSHLN 150 (205)
T ss_dssp --CEEEESSTTT--TCCSCEEEEEEESCHHH------------------------------------HHHHGGGSGGGEE
T ss_pred --eEEEeccccc--cCCCCceEEEECCcHHH------------------------------------HHHHHHHHHHhcC
Confidence 2223366655 45789999999655444 2345555578899
Q ss_pred cCCeEEEEecccC
Q 024331 210 AEGRMVLTFLGRK 222 (269)
Q Consensus 210 pGG~lv~~~~g~~ 222 (269)
|||+++++.+...
T Consensus 151 ~gG~l~~~~~~~~ 163 (205)
T 3grz_A 151 EDGQVIFSGIDYL 163 (205)
T ss_dssp EEEEEEEEEEEGG
T ss_pred CCCEEEEEecCcc
Confidence 9999999766553
No 124
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.08 E-value=3.6e-06 Score=74.25 Aligned_cols=63 Identities=13% Similarity=0.070 Sum_probs=40.8
Q ss_pred hHHHhcHHHHHHHHHHHHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecC
Q 024331 17 SYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLND 96 (269)
Q Consensus 17 sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nD 96 (269)
.|......|.+....++..|+ .+ ......+|+|+|||+|..|..+. +.. .|+-+|+..|
T Consensus 50 ~yr~w~~~~skla~~ll~~l~----~~---~l~~g~~VLDlG~GtG~~t~~la--------~~v------~~~G~V~avD 108 (232)
T 3id6_C 50 EYREWNAFRSKLAGAILKGLK----TN---PIRKGTKVLYLGAASGTTISHVS--------DII------ELNGKAYGVE 108 (232)
T ss_dssp EEEECCTTTCHHHHHHHTTCS----CC---SCCTTCEEEEETCTTSHHHHHHH--------HHH------TTTSEEEEEE
T ss_pred chhhhchHHHHHHHHHHhhhh----hc---CCCCCCEEEEEeecCCHHHHHHH--------HHh------CCCCEEEEEE
Confidence 366666677665554433221 11 12245899999999999888777 432 1457999999
Q ss_pred CCCC
Q 024331 97 LPGN 100 (269)
Q Consensus 97 LP~N 100 (269)
+...
T Consensus 109 ~s~~ 112 (232)
T 3id6_C 109 FSPR 112 (232)
T ss_dssp CCHH
T ss_pred CcHH
Confidence 8654
No 125
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.06 E-value=7.6e-06 Score=78.43 Aligned_cols=114 Identities=18% Similarity=0.158 Sum_probs=68.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhh-HHHHHHHHHhcCCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSL-ASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l-~~~~~~~~~~~~~~~~~~~ 128 (269)
...+|+|+|||+|..++.++ ... +.-+|+..|+..+ .-.+.+.. ..+.... +..|... .
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA--------~~~-------g~~kVvGIDiS~~-~lelAr~n~e~frkr~-~~~Gl~~---~ 232 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVA--------AAT-------NCKHHYGVEKADI-PAKYAETMDREFRKWM-KWYGKKH---A 232 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHC-------CCSEEEEEECCHH-HHHHHHHHHHHHHHHH-HHHTBCC---C
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHC-------CCCEEEEEeCCHH-HHHHHHHHHHHHHHHH-HHhCCCC---C
Confidence 45799999999999988776 332 2236999988764 11122111 1111101 1112100 1
Q ss_pred ceEEeecCCCccCCCCCC--CceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPR--NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~--~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 206 (269)
+ +.-+-|+|....|++ .++|+++++..++| .|...-|+...+
T Consensus 233 r--Vefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~----------------------------------pdl~~aL~Ei~R 276 (438)
T 3uwp_A 233 E--YTLERGDFLSEEWRERIANTSVIFVNNFAFG----------------------------------PEVDHQLKERFA 276 (438)
T ss_dssp E--EEEEECCTTSHHHHHHHHTCSEEEECCTTCC----------------------------------HHHHHHHHHHHT
T ss_pred C--eEEEECcccCCccccccCCccEEEEcccccC----------------------------------chHHHHHHHHHH
Confidence 2 223449999988765 57999999766554 133334445568
Q ss_pred hhccCCeEEEEec
Q 024331 207 ELVAEGRMVLTFL 219 (269)
Q Consensus 207 EL~pGG~lv~~~~ 219 (269)
.|||||+++++-.
T Consensus 277 vLKPGGrIVssE~ 289 (438)
T 3uwp_A 277 NMKEGGRIVSSKP 289 (438)
T ss_dssp TSCTTCEEEESSC
T ss_pred cCCCCcEEEEeec
Confidence 9999999998844
No 126
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.05 E-value=1.9e-05 Score=72.21 Aligned_cols=105 Identities=18% Similarity=0.240 Sum_probs=65.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..++.++ +. +..+|+..|+. . . +....+... ..+.. ..+
T Consensus 39 ~~~VLDiGcGtG~ls~~la--------~~--------g~~~v~~vD~s-~-~------~~~a~~~~~-~~~~~----~~i 89 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAA--------KH--------GAKHVIGVDMS-S-I------IEMAKELVE-LNGFS----DKI 89 (328)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HT--------CCSEEEEEESS-T-H------HHHHHHHHH-HTTCT----TTE
T ss_pred CCEEEEecCccHHHHHHHH--------HC--------CCCEEEEEChH-H-H------HHHHHHHHH-HcCCC----CCE
Confidence 4699999999998877665 32 23589999986 3 2 111111122 12211 122
Q ss_pred EEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~p 210 (269)
- .+.+++....+|.+++|+++|....+.+.. ..++..+|+.+.+-|+|
T Consensus 90 ~--~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~------------------------------~~~~~~~l~~~~~~Lkp 137 (328)
T 1g6q_1 90 T--LLRGKLEDVHLPFPKVDIIISEWMGYFLLY------------------------------ESMMDTVLYARDHYLVE 137 (328)
T ss_dssp E--EEESCTTTSCCSSSCEEEEEECCCBTTBST------------------------------TCCHHHHHHHHHHHEEE
T ss_pred E--EEECchhhccCCCCcccEEEEeCchhhccc------------------------------HHHHHHHHHHHHhhcCC
Confidence 2 233778777889899999999643332211 01334567777888999
Q ss_pred CCeEEE
Q 024331 211 EGRMVL 216 (269)
Q Consensus 211 GG~lv~ 216 (269)
||+++.
T Consensus 138 gG~li~ 143 (328)
T 1g6q_1 138 GGLIFP 143 (328)
T ss_dssp EEEEES
T ss_pred CeEEEE
Confidence 999973
No 127
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.05 E-value=1.5e-05 Score=66.31 Aligned_cols=120 Identities=19% Similarity=0.211 Sum_probs=68.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ +++ .|..+|+..|+... .+....+.+.. .+.. .+
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~--------~~~------~~~~~v~~vD~s~~-------~~~~a~~~~~~-~~~~----~~ 75 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLA--------SLV------GENGRVFGFDIQDK-------AIANTTKKLTD-LNLI----DR 75 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHH--------HHH------CTTCEEEEECSCHH-------HHHHHHHHHHH-TTCG----GG
T ss_pred CCCEEEEcCCCCCHHHHHHH--------HHh------CCCCEEEEEECCHH-------HHHHHHHHHHH-cCCC----CC
Confidence 35799999999999888777 443 13468999998654 01111111111 1110 12
Q ss_pred eEEeecCCCccCCC-CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 130 CFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 130 ~f~~~vpgSFy~~l-fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
+..+-+++.... ++++++|++++...+ +|.. ...+. ..+ ++...+|+.=.+-|
T Consensus 76 --v~~~~~d~~~~~~~~~~~fD~v~~~~~~-----~~~~----~~~~~----~~~-----------~~~~~~l~~~~~~L 129 (197)
T 3eey_A 76 --VTLIKDGHQNMDKYIDCPVKAVMFNLGY-----LPSG----DHSIS----TRP-----------ETTIQALSKAMELL 129 (197)
T ss_dssp --EEEECSCGGGGGGTCCSCEEEEEEEESB-----CTTS----CTTCB----CCH-----------HHHHHHHHHHHHHE
T ss_pred --eEEEECCHHHHhhhccCCceEEEEcCCc-----ccCc----ccccc----cCc-----------ccHHHHHHHHHHhC
Confidence 222347776654 677999999987555 2211 11111 011 12333555556677
Q ss_pred ccCCeEEEEeccc
Q 024331 209 VAEGRMVLTFLGR 221 (269)
Q Consensus 209 ~pGG~lv~~~~g~ 221 (269)
+|||++++.....
T Consensus 130 k~gG~l~~~~~~~ 142 (197)
T 3eey_A 130 VTGGIITVVIYYG 142 (197)
T ss_dssp EEEEEEEEEECCB
T ss_pred cCCCEEEEEEccC
Confidence 8999999987543
No 128
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.03 E-value=1.4e-05 Score=72.12 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=27.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
++.+|+|+|||||..+..++-. +.+.. +.....++|+..|+..+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~----L~e~~---~~~~~~~~I~atDis~~ 148 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAIT----LADAL---GMAPGRWKVFASDIDTE 148 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHH----HHHHH---CSCTTSEEEEEEESCHH
T ss_pred CCcEEEEeeccCChhHHHHHHH----HHHhc---ccCCCCeEEEEEECCHH
Confidence 4689999999999854332211 11322 11111479999999876
No 129
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.01 E-value=9.8e-06 Score=74.51 Aligned_cols=103 Identities=18% Similarity=0.314 Sum_probs=68.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ +++ |..+++..|+| . . +. . . ... .+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~-~-~------~~-------~-a-~~~---~~ 237 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIH--------EIF-------PHLKCTVFDQP-Q-V------VG-------N-L-TGN---EN 237 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HHC-------TTSEEEEEECH-H-H------HS-------S-C-CCC---SS
T ss_pred CCCEEEEECCCcCHHHHHHH--------HHC-------CCCeEEEeccH-H-H------Hh-------h-c-ccC---CC
Confidence 35799999999999888777 654 56788888985 2 1 11 0 0 001 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
+..+.++|+. .+| ++|+++++..||+.++ .+...+|+.=++-|+
T Consensus 238 --v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d-------------------------------~~~~~~l~~~~~~L~ 281 (358)
T 1zg3_A 238 --LNFVGGDMFK-SIP--SADAVLLKWVLHDWND-------------------------------EQSLKILKNSKEAIS 281 (358)
T ss_dssp --EEEEECCTTT-CCC--CCSEEEEESCGGGSCH-------------------------------HHHHHHHHHHHHHTG
T ss_pred --cEEEeCccCC-CCC--CceEEEEcccccCCCH-------------------------------HHHHHHHHHHHHhCC
Confidence 3345689988 677 4999999999997422 112233443356677
Q ss_pred c---CCeEEEEecccCC
Q 024331 210 A---EGRMVLTFLGRKS 223 (269)
Q Consensus 210 p---GG~lv~~~~g~~~ 223 (269)
| ||++++..+...+
T Consensus 282 p~~~gG~l~i~e~~~~~ 298 (358)
T 1zg3_A 282 HKGKDGKVIIIDISIDE 298 (358)
T ss_dssp GGGGGCEEEEEECEECT
T ss_pred CCCCCcEEEEEEeccCC
Confidence 9 9999998776543
No 130
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.00 E-value=3.2e-06 Score=77.75 Aligned_cols=108 Identities=14% Similarity=0.194 Sum_probs=70.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
.-+|+|+|||+|..++.++ ++. |..+|+..|.... .+......+.. .+. ...
T Consensus 197 ~~~VLDlGcG~G~~~~~la--------~~~-------~~~~v~~vD~s~~-------~l~~a~~~~~~-~~~-----~~~ 248 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFA--------RHS-------PKIRLTLCDVSAP-------AVEASRATLAA-NGV-----EGE 248 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHH--------HHC-------TTCBCEEEESBHH-------HHHHHHHHHHH-TTC-----CCE
T ss_pred CCeEEEecCccCHHHHHHH--------HHC-------CCCEEEEEECCHH-------HHHHHHHHHHH-hCC-----CCE
Confidence 4589999999999988776 442 5678999997553 01111111111 111 112
Q ss_pred EEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~p 210 (269)
+ +.+++.. ++++++|+++++..+||.-. ....+...||+.=.+-|+|
T Consensus 249 ~---~~~d~~~--~~~~~fD~Iv~~~~~~~g~~----------------------------~~~~~~~~~l~~~~~~Lkp 295 (343)
T 2pjd_A 249 V---FASNVFS--EVKGRFDMIISNPPFHDGMQ----------------------------TSLDAAQTLIRGAVRHLNS 295 (343)
T ss_dssp E---EECSTTT--TCCSCEEEEEECCCCCSSSH----------------------------HHHHHHHHHHHHHGGGEEE
T ss_pred E---EEccccc--cccCCeeEEEECCCcccCcc----------------------------CCHHHHHHHHHHHHHhCCC
Confidence 2 3366665 34789999999988887211 0124567788888899999
Q ss_pred CCeEEEEec
Q 024331 211 EGRMVLTFL 219 (269)
Q Consensus 211 GG~lv~~~~ 219 (269)
||.+++...
T Consensus 296 gG~l~i~~~ 304 (343)
T 2pjd_A 296 GGELRIVAN 304 (343)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEc
Confidence 999999764
No 131
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.00 E-value=1.1e-05 Score=70.53 Aligned_cols=87 Identities=11% Similarity=0.173 Sum_probs=49.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ ++ .|...|+..|+... . ..........+++....+. .+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la--------~~-------~p~~~v~GiDis~~-~---l~~A~~~~~~l~~~~~~~~---~n 103 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELS--------PL-------FPDTLILGLEIRVK-V---SDYVQDRIRALRAAPAGGF---QN 103 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHG--------GG-------STTSEEEEEESCHH-H---HHHHHHHHHHHHHSTTCCC---TT
T ss_pred CCCeEEEEccCCcHHHHHHH--------HH-------CCCCeEEEEECCHH-H---HHHHHHHHHHHHHHHhcCC---Ce
Confidence 46799999999999988776 43 26789999997665 0 0000000001111000111 23
Q ss_pred eEEeecCCCccC---CCCCCCceeeEeccccccc
Q 024331 130 CFFTGVPGSFYG---RLFPRNSVHLFHSSYSLQW 160 (269)
Q Consensus 130 ~f~~~vpgSFy~---~lfP~~Svd~~~Ss~alHW 160 (269)
+-+ +-++... ..||++++|.++..+.-.|
T Consensus 104 v~~--~~~d~~~~l~~~~~~~~~D~v~~~~~dp~ 135 (235)
T 3ckk_A 104 IAC--LRSNAMKHLPNFFYKGQLTKMFFLFPDPH 135 (235)
T ss_dssp EEE--EECCTTTCHHHHCCTTCEEEEEEESCC--
T ss_pred EEE--EECcHHHhhhhhCCCcCeeEEEEeCCCch
Confidence 222 2356554 2388999999998776666
No 132
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.98 E-value=2.2e-05 Score=65.00 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=66.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhc--CCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKL--GSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA 127 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~--~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~ 127 (269)
...+|+|+|||+|..++.++ +++... +...|..+|+..|+...- .++
T Consensus 22 ~~~~vLDlGcG~G~~~~~la--------~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~----------------- 70 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAV--------QKVNAAGTDPSSPVGFVLGVDLLHIF------PLE----------------- 70 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHH--------HHTTTTCCCTTSCCCEEEEECSSCCC------CCT-----------------
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHhccccccccCCCceEEEEechhcc------cCC-----------------
Confidence 45799999999999988777 443100 011234789999987630 000
Q ss_pred CceEEeecCCCccCC--------CCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHH
Q 024331 128 GQCFFTGVPGSFYGR--------LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSL 199 (269)
Q Consensus 128 ~~~f~~~vpgSFy~~--------lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 199 (269)
.-.++ ..+++... .++++++|+++|..++||.-. ...+.+ ........
T Consensus 71 ~~~~~--~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~--------------------~~~~~~--~~~~~~~~ 126 (196)
T 2nyu_A 71 GATFL--CPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGF--------------------RDLDHD--RLISLCLT 126 (196)
T ss_dssp TCEEE--CSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSC--------------------HHHHHH--HHHHHHHH
T ss_pred CCeEE--EeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCC--------------------cccCHH--HHHHHHHH
Confidence 11222 02454432 256789999999776666211 000010 01122345
Q ss_pred HHhhhhhhhccCCeEEEEecc
Q 024331 200 FLKCRSEELVAEGRMVLTFLG 220 (269)
Q Consensus 200 FL~~Ra~EL~pGG~lv~~~~g 220 (269)
+|+.=.+-|+|||++++..+.
T Consensus 127 ~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 127 LLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHhcCCCEEEEEecC
Confidence 555556778899999998653
No 133
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.98 E-value=1e-05 Score=75.88 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=64.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..++.++ +++ |..+|+..|.... .+......+.. .+.. ...
T Consensus 223 ~~~VLDlGcG~G~~s~~la--------~~~-------p~~~V~gvD~s~~-------al~~Ar~n~~~-ngl~----~~~ 275 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLL--------DKN-------PQAKVVFVDESPM-------AVASSRLNVET-NMPE----ALD 275 (375)
T ss_dssp CSEEEEETCTTCHHHHHHH--------HHC-------TTCEEEEEESCHH-------HHHHHHHHHHH-HCGG----GGG
T ss_pred CCeEEEEeCcchHHHHHHH--------HHC-------CCCEEEEEECcHH-------HHHHHHHHHHH-cCCC----cCc
Confidence 3799999999999998877 543 5689999997543 11111111111 1110 011
Q ss_pred EEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~p 210 (269)
-+..+.++++. .+|++++|+++|+-.+|+...++... .. .||+.=.+-|+|
T Consensus 276 ~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~---------------------~~-------~~l~~~~~~Lkp 326 (375)
T 4dcm_A 276 RCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNV---------------------AW-------EMFHHARRCLKI 326 (375)
T ss_dssp GEEEEECSTTT-TCCTTCEEEEEECCCC-------CCH---------------------HH-------HHHHHHHHHEEE
T ss_pred eEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHH---------------------HH-------HHHHHHHHhCCC
Confidence 12223367776 67889999999988888743332211 11 233333455679
Q ss_pred CCeEEEEe
Q 024331 211 EGRMVLTF 218 (269)
Q Consensus 211 GG~lv~~~ 218 (269)
||+++++.
T Consensus 327 gG~l~iv~ 334 (375)
T 4dcm_A 327 NGELYIVA 334 (375)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 99999975
No 134
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.98 E-value=8.6e-05 Score=63.76 Aligned_cols=71 Identities=17% Similarity=0.116 Sum_probs=44.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ +++ +..+|+..|.... +. +.+++...... .-
T Consensus 74 ~~~~VLDlGcG~G~~~~~la--------~~~-------~~~~v~gvD~s~~----------~~-~~a~~~~~~~~---~v 124 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVA--------DIA-------DKGIVYAIEYAPR----------IM-RELLDACAERE---NI 124 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHH--------HHT-------TTSEEEEEESCHH----------HH-HHHHHHTTTCT---TE
T ss_pred CCCEEEEEcccCCHHHHHHH--------HHc-------CCcEEEEEECCHH----------HH-HHHHHHhhcCC---Ce
Confidence 45799999999999988777 543 2468999987653 21 11222211100 12
Q ss_pred eEEeecCCCccC----CCCCCCceeeEe
Q 024331 130 CFFTGVPGSFYG----RLFPRNSVHLFH 153 (269)
Q Consensus 130 ~f~~~vpgSFy~----~lfP~~Svd~~~ 153 (269)
.++. +++.. ..++ +++|+++
T Consensus 125 ~~~~---~d~~~~~~~~~~~-~~~D~v~ 148 (230)
T 1fbn_A 125 IPIL---GDANKPQEYANIV-EKVDVIY 148 (230)
T ss_dssp EEEE---CCTTCGGGGTTTS-CCEEEEE
T ss_pred EEEE---CCCCCcccccccC-ccEEEEE
Confidence 3433 56655 6666 8999998
No 135
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.98 E-value=7.4e-06 Score=71.78 Aligned_cols=48 Identities=21% Similarity=0.187 Sum_probs=33.9
Q ss_pred HHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 35 ITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 35 ~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
.|++++..+. ..++..+|+|+|||+|..|..++ ++ ...+|+..|+..+
T Consensus 24 kL~~~L~~~~--~~~~g~~VLDiGcGtG~~t~~la--------~~--------g~~~V~gvDis~~ 71 (232)
T 3opn_A 24 KLEKALKEFH--LEINGKTCLDIGSSTGGFTDVML--------QN--------GAKLVYALDVGTN 71 (232)
T ss_dssp HHHHHHHHTT--CCCTTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEECSSCC
T ss_pred HHHHHHHHcC--CCCCCCEEEEEccCCCHHHHHHH--------hc--------CCCEEEEEcCCHH
Confidence 3455555442 23345799999999999988776 32 1248999999988
No 136
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.97 E-value=1.8e-05 Score=71.72 Aligned_cols=114 Identities=13% Similarity=0.135 Sum_probs=68.6
Q ss_pred CceEEEeecCCC--CcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCC
Q 024331 50 TKVAIADLGCSS--GPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA 127 (269)
Q Consensus 50 ~~~~IaD~GCs~--G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~ 127 (269)
..-+|+|+|||+ +.|+..++ ++. .|+.+|+..|.... ++.. .++...... ..
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la--------~~~------~P~arVv~VD~sp~----------mLa~-Ar~~l~~~~-~~ 131 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIA--------QSV------APESRVVYVDNDPI----------VLTL-SQGLLASTP-EG 131 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHH--------HHH------CTTCEEEEEECCHH----------HHHT-THHHHCCCS-SS
T ss_pred CCCEEEEeCCCCCcccHHHHHH--------HHH------CCCCEEEEEeCChH----------HHHH-HHHHhccCC-CC
Confidence 346899999998 77877666 331 26799999997654 3321 222221100 00
Q ss_pred CceEEeecCCCccCC------CCCCCcee-----eEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHH
Q 024331 128 GQCFFTGVPGSFYGR------LFPRNSVH-----LFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRD 196 (269)
Q Consensus 128 ~~~f~~~vpgSFy~~------lfP~~Svd-----~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 196 (269)
+--|+. +++... +...+++| .++++..||||.+-.. +..+.+.+
T Consensus 132 ~~~~v~---aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~---------------p~~~l~~l------- 186 (277)
T 3giw_A 132 RTAYVE---ADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDD---------------AVGIVRRL------- 186 (277)
T ss_dssp EEEEEE---CCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGC---------------HHHHHHHH-------
T ss_pred cEEEEE---ecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhh---------------HHHHHHHH-------
Confidence 123444 677653 11145666 4889999999855210 11223333
Q ss_pred HHHHHhhhhhhhccCCeEEEEecccC
Q 024331 197 FSLFLKCRSEELVAEGRMVLTFLGRK 222 (269)
Q Consensus 197 ~~~FL~~Ra~EL~pGG~lv~~~~g~~ 222 (269)
.+-|+|||+|+++.+..+
T Consensus 187 --------~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 187 --------LEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp --------HTTSCTTCEEEEEEECCT
T ss_pred --------HHhCCCCcEEEEEeccCC
Confidence 667889999999998775
No 137
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.96 E-value=5.7e-05 Score=63.58 Aligned_cols=83 Identities=13% Similarity=0.100 Sum_probs=49.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ +.. .|..+|+..|...+ . +....+... ..+. .+
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~--------~~~------~~~~~v~~vD~~~~-~------~~~a~~~~~-~~~~-----~~ 129 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTA--------EIV------GEDGLVVSIERIPE-L------AEKAERTLR-KLGY-----DN 129 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------CTTSEEEEEESCHH-H------HHHHHHHHH-HHTC-----TT
T ss_pred CCCEEEEECCCccHHHHHHH--------HHh------CCCCEEEEEeCCHH-H------HHHHHHHHH-HcCC-----CC
Confidence 35799999999999988777 442 13468899887543 1 111111111 1121 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccccccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWL 161 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWL 161 (269)
+- .+.+++...+.+.+++|++++..++|++
T Consensus 130 v~--~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 159 (215)
T 2yxe_A 130 VI--VIVGDGTLGYEPLAPYDRIYTTAAGPKI 159 (215)
T ss_dssp EE--EEESCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred eE--EEECCcccCCCCCCCeeEEEECCchHHH
Confidence 21 1235665443347899999999998874
No 138
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.94 E-value=1.9e-05 Score=67.87 Aligned_cols=75 Identities=15% Similarity=0.128 Sum_probs=46.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ +++ .|..+|+..|+... .+....+..+.+ . .-
T Consensus 77 ~~~~vLDlG~G~G~~~~~la--------~~~------g~~~~v~gvD~s~~-------~i~~~~~~a~~~--~-----~v 128 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVS--------DIV------GPDGLVYAVEFSHR-------SGRDLINLAKKR--T-----NI 128 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------CTTCEEEEECCCHH-------HHHHHHHHHHHC--T-----TE
T ss_pred CCCEEEEEcccCCHHHHHHH--------HHh------CCCcEEEEEECCHH-------HHHHHHHHhhcc--C-----Ce
Confidence 35799999999999988877 443 14468999987653 111111212221 1 11
Q ss_pred eEEeecCCCccC---CCCCCCceeeEecc
Q 024331 130 CFFTGVPGSFYG---RLFPRNSVHLFHSS 155 (269)
Q Consensus 130 ~f~~~vpgSFy~---~lfP~~Svd~~~Ss 155 (269)
.|+. +++.. ..++++++|++++.
T Consensus 129 ~~~~---~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 129 IPVI---EDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp EEEC---SCTTCGGGGGGGCCCEEEEEEC
T ss_pred EEEE---cccCChhhhcccCCcEEEEEEc
Confidence 2333 66655 34567899999993
No 139
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.94 E-value=9.8e-05 Score=61.81 Aligned_cols=121 Identities=15% Similarity=0.122 Sum_probs=71.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ ++. |..+|+..|.... . +....+... ..+. .+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la--------~~~-------~~~~v~~vD~s~~-~------~~~a~~~~~-~~~~-----~~ 91 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEAS--------NLM-------PNGRIFALERNPQ-Y------LGFIRDNLK-KFVA-----RN 91 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HHC-------TTSEEEEEECCHH-H------HHHHHHHHH-HHTC-----TT
T ss_pred CCCEEEEECCCCCHHHHHHH--------HHC-------CCCEEEEEeCCHH-H------HHHHHHHHH-HhCC-----Cc
Confidence 45799999999999988777 542 5689999997654 0 111111111 1121 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
+ ..+.+++...+.+..++|++++..+++ +...+|+.=.+-|+
T Consensus 92 v--~~~~~d~~~~~~~~~~~D~i~~~~~~~------------------------------------~~~~~l~~~~~~Lk 133 (204)
T 3e05_A 92 V--TLVEAFAPEGLDDLPDPDRVFIGGSGG------------------------------------MLEEIIDAVDRRLK 133 (204)
T ss_dssp E--EEEECCTTTTCTTSCCCSEEEESCCTT------------------------------------CHHHHHHHHHHHCC
T ss_pred E--EEEeCChhhhhhcCCCCCEEEECCCCc------------------------------------CHHHHHHHHHHhcC
Confidence 2 122367666555557899999854442 11122333355677
Q ss_pred cCCeEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHHccC
Q 024331 210 AEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEVT 250 (269)
Q Consensus 210 pGG~lv~~~~g~~~~~~~~~~~~~~~~~l~~~l~~mv~eG~ 250 (269)
|||++++...... ........|.+.|+
T Consensus 134 pgG~l~~~~~~~~--------------~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 134 SEGVIVLNAVTLD--------------TLTKAVEFLEDHGY 160 (204)
T ss_dssp TTCEEEEEECBHH--------------HHHHHHHHHHHTTC
T ss_pred CCeEEEEEecccc--------------cHHHHHHHHHHCCC
Confidence 9999999765432 34445555666775
No 140
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.92 E-value=3.8e-05 Score=65.37 Aligned_cols=78 Identities=14% Similarity=0.026 Sum_probs=48.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..+. +.. .+|+..|.... . .+..++.... . ++
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~--------~~~---------~~v~~vD~~~~----------~-~~~a~~~~~~-~---~~ 117 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIA--------EIV---------DKVVSVEINEK----------M-YNYASKLLSY-Y---NN 117 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHS---------SEEEEEESCHH----------H-HHHHHHHHTT-C---SS
T ss_pred CCCEEEEEcCCCCHHHHHHH--------HHc---------CEEEEEeCCHH----------H-HHHHHHHHhh-c---CC
Confidence 35799999999999988776 431 47888886543 1 1112222111 0 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccccccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWL 161 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWL 161 (269)
+..+.+++...+.+++++|++++..++|++
T Consensus 118 --v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 118 --IKLILGDGTLGYEEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp --EEEEESCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred --eEEEECCcccccccCCCccEEEECCcHHHH
Confidence 122336776645567899999999888874
No 141
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.91 E-value=1.3e-05 Score=69.49 Aligned_cols=134 Identities=14% Similarity=0.074 Sum_probs=77.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ ... |..+|+..|.... . +....+... +.+. .+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la--------~~~-------~~~~v~~vD~s~~-~------~~~a~~~~~-~~~~-----~~ 121 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIK--------ICF-------PHLHVTIVDSLNK-R------ITFLEKLSE-ALQL-----EN 121 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHH--------HHC-------TTCEEEEEESCHH-H------HHHHHHHHH-HHTC-----SS
T ss_pred CCCEEEEecCCCCHHHHHHH--------HhC-------CCCEEEEEeCCHH-H------HHHHHHHHH-HcCC-----CC
Confidence 45799999999999998777 331 5678999997653 0 111111111 1121 12
Q ss_pred eEEeecCCCccCCCCC---CCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh
Q 024331 130 CFFTGVPGSFYGRLFP---RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP---~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 206 (269)
+..+.+++....++ ++++|+++|.. + .|+..+++.=.+
T Consensus 122 --v~~~~~d~~~~~~~~~~~~~fD~V~~~~-----------~--------------------------~~~~~~l~~~~~ 162 (240)
T 1xdz_A 122 --TTFCHDRAETFGQRKDVRESYDIVTARA-----------V--------------------------ARLSVLSELCLP 162 (240)
T ss_dssp --EEEEESCHHHHTTCTTTTTCEEEEEEEC-----------C--------------------------SCHHHHHHHHGG
T ss_pred --EEEEeccHHHhcccccccCCccEEEEec-----------c--------------------------CCHHHHHHHHHH
Confidence 22334777766554 68999999832 0 123344555567
Q ss_pred hhccCCeEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHHccCcccccccceeccc
Q 024331 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEVTKSFLLLIVFNQLN 263 (269)
Q Consensus 207 EL~pGG~lv~~~~g~~~~~~~~~~~~~~~~~l~~~l~~mv~eG~i~~~~~d~FnlP~ 263 (269)
-|+|||++++.. |.. .. +-+....+.+...|+ ...++..|.+|.
T Consensus 163 ~LkpgG~l~~~~-g~~-----~~------~~~~~~~~~l~~~g~-~~~~~~~~~~~~ 206 (240)
T 1xdz_A 163 LVKKNGLFVALK-AAS-----AE------EELNAGKKAITTLGG-ELENIHSFKLPI 206 (240)
T ss_dssp GEEEEEEEEEEE-CC------CH------HHHHHHHHHHHHTTE-EEEEEEEEECTT
T ss_pred hcCCCCEEEEEe-CCC-----ch------HHHHHHHHHHHHcCC-eEeEEEEEecCC
Confidence 889999998852 211 11 123444555666675 333445566664
No 142
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.91 E-value=4.3e-05 Score=65.03 Aligned_cols=88 Identities=11% Similarity=-0.037 Sum_probs=51.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCC---CCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS---ASGA 126 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~---~~~~ 126 (269)
...+|+|+|||+|..++.+. +... ....|..+|+..|.... . +....+.+.. .+. ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la--------~~~~--~~~~~~~~v~~vD~~~~-~------~~~a~~~~~~-~~~~~~~~-- 139 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMA--------IKMN--VLENKNSYVIGLERVKD-L------VNFSLENIKR-DKPELLKI-- 139 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHTT--TTTCTTCEEEEEESCHH-H------HHHHHHHHHH-HCGGGGSS--
T ss_pred CCCEEEEECCCCCHHHHHHH--------HHhc--ccCCCCCEEEEEeCCHH-H------HHHHHHHHHH-cCcccccc--
Confidence 35799999999999888776 4320 01125578999997543 1 1111111111 110 00
Q ss_pred CCceEEeecCCCccCCC----CCCCceeeEeccccccc
Q 024331 127 AGQCFFTGVPGSFYGRL----FPRNSVHLFHSSYSLQW 160 (269)
Q Consensus 127 ~~~~f~~~vpgSFy~~l----fP~~Svd~~~Ss~alHW 160 (269)
..-.++. +++...+ ++.+++|++++..++|+
T Consensus 140 ~~v~~~~---~d~~~~~~~~~~~~~~fD~I~~~~~~~~ 174 (227)
T 2pbf_A 140 DNFKIIH---KNIYQVNEEEKKELGLFDAIHVGASASE 174 (227)
T ss_dssp TTEEEEE---CCGGGCCHHHHHHHCCEEEEEECSBBSS
T ss_pred CCEEEEE---CChHhcccccCccCCCcCEEEECCchHH
Confidence 0112333 6777655 67789999999888775
No 143
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.89 E-value=0.0002 Score=60.84 Aligned_cols=143 Identities=8% Similarity=-0.011 Sum_probs=75.5
Q ss_pred CCceEEEeecCC-CCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCC
Q 024331 49 PTKVAIADLGCS-SGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAA 127 (269)
Q Consensus 49 ~~~~~IaD~GCs-~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~ 127 (269)
.+..+|+|+||| +|..++.++ ++. ..+|+..|+... .+........ ..+..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la--------~~~--------~~~v~~vD~s~~-------~~~~a~~~~~-~~~~~---- 105 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAE--------KFF--------NCKVTATEVDEE-------FFEYARRNIE-RNNSN---- 105 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHH--------HHH--------CCEEEEEECCHH-------HHHHHHHHHH-HTTCC----
T ss_pred CCCCEEEEcCCCHHHHHHHHHH--------Hhc--------CCEEEEEECCHH-------HHHHHHHHHH-HhCCC----
Confidence 356899999999 999988776 332 268999997554 0111111111 11111
Q ss_pred CceEEeecCCCcc-CCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh
Q 024331 128 GQCFFTGVPGSFY-GRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (269)
Q Consensus 128 ~~~f~~~vpgSFy-~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 206 (269)
--++. ++.. -..+|++++|+++++-..+|...... .. ...-+..+.. ...+...||+.=.+
T Consensus 106 -v~~~~---~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~--~~-~~~~~~~~~~-----------~~~~~~~~l~~~~~ 167 (230)
T 3evz_A 106 -VRLVK---SNGGIIKGVVEGTFDVIFSAPPYYDKPLGRV--LT-EREAIGGGKY-----------GEEFSVKLLEEAFD 167 (230)
T ss_dssp -CEEEE---CSSCSSTTTCCSCEEEEEECCCCC------------------CCSS-----------SCHHHHHHHHHHGG
T ss_pred -cEEEe---CCchhhhhcccCceeEEEECCCCcCCccccc--cC-hhhhhccCcc-----------chHHHHHHHHHHHH
Confidence 12333 5542 23567799999999877776544111 00 0000000000 01223456665567
Q ss_pred hhccCCeEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHHccC
Q 024331 207 ELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEVT 250 (269)
Q Consensus 207 EL~pGG~lv~~~~g~~~~~~~~~~~~~~~~~l~~~l~~mv~eG~ 250 (269)
-|+|||++++.+.... +......+.|.+.|+
T Consensus 168 ~LkpgG~l~~~~~~~~-------------~~~~~~~~~l~~~g~ 198 (230)
T 3evz_A 168 HLNPGGKVALYLPDKE-------------KLLNVIKERGIKLGY 198 (230)
T ss_dssp GEEEEEEEEEEEESCH-------------HHHHHHHHHHHHTTC
T ss_pred HhCCCeEEEEEecccH-------------hHHHHHHHHHHHcCC
Confidence 7889999999764321 234555566667776
No 144
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.88 E-value=2.3e-05 Score=63.99 Aligned_cols=110 Identities=9% Similarity=-0.058 Sum_probs=62.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (269)
+..+|+|+|||+|..++.++ ++ +..+|+..|+... +. +.+++.. ..++ ..
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~--------~~--------~~~~v~~vD~~~~----------~~-~~a~~~~~~~~~--~~ 81 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAV--------SR--------GMSAAVLVEKNRK----------AQ-AIIQDNIIMTKA--EN 81 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHH--------HT--------TCCEEEEECCCHH----------HH-HHHHHHHHTTTC--GG
T ss_pred CCCeEEEeCCCCCHHHHHHH--------Hc--------CCCEEEEEECCHH----------HH-HHHHHHHHHcCC--CC
Confidence 45799999999999988766 32 3368999997543 11 1121111 1111 01
Q ss_pred ceEEeecCCCccCC-CCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 129 QCFFTGVPGSFYGR-LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 129 ~~f~~~vpgSFy~~-lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
++ ..+.+++... ...++++|++++...+|+ . ...+.+..+.+ .+-
T Consensus 82 ~~--~~~~~d~~~~~~~~~~~fD~i~~~~~~~~---------------------------~---~~~~~~~~l~~--~~~ 127 (177)
T 2esr_A 82 RF--TLLKMEAERAIDCLTGRFDLVFLDPPYAK---------------------------E---TIVATIEALAA--KNL 127 (177)
T ss_dssp GE--EEECSCHHHHHHHBCSCEEEEEECCSSHH---------------------------H---HHHHHHHHHHH--TTC
T ss_pred ce--EEEECcHHHhHHhhcCCCCEEEECCCCCc---------------------------c---hHHHHHHHHHh--CCC
Confidence 22 2234676652 234567999998433221 0 01122222322 678
Q ss_pred hccCCeEEEEecccC
Q 024331 208 LVAEGRMVLTFLGRK 222 (269)
Q Consensus 208 L~pGG~lv~~~~g~~ 222 (269)
|+|||++++......
T Consensus 128 L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 128 LSEQVMVVCETDKTV 142 (177)
T ss_dssp EEEEEEEEEEEETTC
T ss_pred cCCCcEEEEEECCcc
Confidence 999999999987654
No 145
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.88 E-value=5.8e-05 Score=63.04 Aligned_cols=100 Identities=13% Similarity=0.084 Sum_probs=61.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..++.++ +.+ |..+|+..|.... . +........ ..+ . .+
T Consensus 66 ~~~vLDiG~G~G~~~~~l~--------~~~-------~~~~v~~vD~s~~-~------~~~a~~~~~-~~~--~---~~- 116 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLS--------IVR-------PEAHFTLLDSLGK-R------VRFLRQVQH-ELK--L---EN- 116 (207)
T ss_dssp SSEEEEETCTTTTTHHHHH--------HHC-------TTSEEEEEESCHH-H------HHHHHHHHH-HTT--C---SS-
T ss_pred CCeEEEECCCCCHHHHHHH--------HHC-------CCCEEEEEeCCHH-H------HHHHHHHHH-HcC--C---CC-
Confidence 4699999999999998877 442 5678999997653 1 111111111 111 1 12
Q ss_pred EEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~p 210 (269)
+..+.+++.... |++++|++++.. + .++..+|+.=.+-|+|
T Consensus 117 -v~~~~~d~~~~~-~~~~~D~i~~~~-----------~--------------------------~~~~~~l~~~~~~L~~ 157 (207)
T 1jsx_A 117 -IEPVQSRVEEFP-SEPPFDGVISRA-----------F--------------------------ASLNDMVSWCHHLPGE 157 (207)
T ss_dssp -EEEEECCTTTSC-CCSCEEEEECSC-----------S--------------------------SSHHHHHHHHTTSEEE
T ss_pred -eEEEecchhhCC-ccCCcCEEEEec-----------c--------------------------CCHHHHHHHHHHhcCC
Confidence 222346776543 678999999831 0 0123444444678889
Q ss_pred CCeEEEEe
Q 024331 211 EGRMVLTF 218 (269)
Q Consensus 211 GG~lv~~~ 218 (269)
||.+++..
T Consensus 158 gG~l~~~~ 165 (207)
T 1jsx_A 158 QGRFYALK 165 (207)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEe
Confidence 99999974
No 146
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.87 E-value=3.6e-05 Score=72.49 Aligned_cols=105 Identities=17% Similarity=0.260 Sum_probs=62.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
.-+|+|+|||+|..|+..+ +. | .-+|+..|... . + .......+..|.. ..+
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa--------~a----G----A~~V~ave~s~--~------~-~~a~~~~~~n~~~----~~i 134 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCA--------QA----G----ARRVYAVEASA--I------W-QQAREVVRFNGLE----DRV 134 (376)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HT----T----CSEEEEEECST--T------H-HHHHHHHHHTTCT----TTE
T ss_pred CCEEEEeCCCccHHHHHHH--------Hh----C----CCEEEEEeChH--H------H-HHHHHHHHHcCCC----ceE
Confidence 3589999999998777655 32 1 24799999642 2 1 1111122222321 122
Q ss_pred EEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVA 210 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~p 210 (269)
.-+.|+....-+| ..+|+++|- |+...-. .+..+..+|.+|.+=|+|
T Consensus 135 --~~i~~~~~~~~lp-e~~DvivsE----~~~~~l~--------------------------~e~~l~~~l~a~~r~Lkp 181 (376)
T 4hc4_A 135 --HVLPGPVETVELP-EQVDAIVSE----WMGYGLL--------------------------HESMLSSVLHARTKWLKE 181 (376)
T ss_dssp --EEEESCTTTCCCS-SCEEEEECC----CCBTTBT--------------------------TTCSHHHHHHHHHHHEEE
T ss_pred --EEEeeeeeeecCC-ccccEEEee----ccccccc--------------------------ccchhhhHHHHHHhhCCC
Confidence 2234777777777 579999993 3221110 113456778888999999
Q ss_pred CCeEEEE
Q 024331 211 EGRMVLT 217 (269)
Q Consensus 211 GG~lv~~ 217 (269)
||+|+-.
T Consensus 182 ~G~~iP~ 188 (376)
T 4hc4_A 182 GGLLLPA 188 (376)
T ss_dssp EEEEESC
T ss_pred CceECCc
Confidence 9998743
No 147
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.85 E-value=9.1e-05 Score=62.91 Aligned_cols=82 Identities=17% Similarity=0.071 Sum_probs=48.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCC---CCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS---ASGA 126 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~---~~~~ 126 (269)
...+|+|+|||+|..+..++ +.+ .+..+|+..|+... . +....+.... .+. +.
T Consensus 77 ~~~~vLDiG~G~G~~~~~la--------~~~------~~~~~v~~vD~s~~-~------~~~a~~~~~~-~~~~~~~~-- 132 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFA--------RMV------GCTGKVIGIDHIKE-L------VDDSVNNVRK-DDPTLLSS-- 132 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH------CTTCEEEEEESCHH-H------HHHHHHHHHH-HCTHHHHT--
T ss_pred CCCEEEEEcCCcCHHHHHHH--------HHh------CCCcEEEEEeCCHH-H------HHHHHHHHHh-hcccccCC--
Confidence 45799999999999988776 443 14468999997543 1 1111111111 110 00
Q ss_pred CCc-eEEeecCCCccCCCCCCCceeeEecccccc
Q 024331 127 AGQ-CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQ 159 (269)
Q Consensus 127 ~~~-~f~~~vpgSFy~~lfP~~Svd~~~Ss~alH 159 (269)
.+ .++. ++......+.+++|++++...++
T Consensus 133 -~~v~~~~---~d~~~~~~~~~~fD~i~~~~~~~ 162 (226)
T 1i1n_A 133 -GRVQLVV---GDGRMGYAEEAPYDAIHVGAAAP 162 (226)
T ss_dssp -SSEEEEE---SCGGGCCGGGCCEEEEEECSBBS
T ss_pred -CcEEEEE---CCcccCcccCCCcCEEEECCchH
Confidence 12 2333 56665556678999999876654
No 148
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.84 E-value=6.6e-05 Score=68.07 Aligned_cols=83 Identities=11% Similarity=0.117 Sum_probs=51.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ ++. ....+|+..|+..+ . +....+... +.+. .+
T Consensus 75 ~~~~VLDiGcG~G~~~~~la--------~~~------~~~~~v~gvD~s~~-~------~~~a~~~~~-~~g~-----~~ 127 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMS--------RVV------GEKGLVVSVEYSRK-I------CEIAKRNVE-RLGI-----EN 127 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------CTTCEEEEEESCHH-H------HHHHHHHHH-HTTC-----CS
T ss_pred CcCEEEEecCCchHHHHHHH--------Hhc------CCCCEEEEEECCHH-H------HHHHHHHHH-HcCC-----CC
Confidence 35799999999999888776 443 01367999997654 0 111111111 1121 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccccccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWL 161 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWL 161 (269)
+..+-+++...+.+.+++|++++...+|++
T Consensus 128 --v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 128 --VIFVCGDGYYGVPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp --EEEEESCGGGCCGGGCCEEEEEECSBBSCC
T ss_pred --eEEEECChhhccccCCCeEEEEEcCCHHHH
Confidence 222347777766678899999999888874
No 149
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.84 E-value=5.5e-05 Score=65.12 Aligned_cols=79 Identities=16% Similarity=0.230 Sum_probs=47.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..+..++ +.. + .+|+..|.... . +....+.+. ..+ + .++
T Consensus 92 ~~~vLdiG~G~G~~~~~la--------~~~-------~-~~v~~vD~~~~-~------~~~a~~~~~-~~~--~---~~v 142 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALIS--------EIV-------K-TDVYTIERIPE-L------VEFAKRNLE-RAG--V---KNV 142 (235)
T ss_dssp TCCEEEECCTTSHHHHHHH--------HHH-------C-SCEEEEESCHH-H------HHHHHHHHH-HTT--C---CSE
T ss_pred CCEEEEEeCCcCHHHHHHH--------HHh-------C-CEEEEEeCCHH-H------HHHHHHHHH-HcC--C---CCc
Confidence 4699999999999988776 443 2 57888886543 0 111111111 112 1 122
Q ss_pred EEeecCCCccCCCCCCCc-eeeEecccccccc
Q 024331 131 FFTGVPGSFYGRLFPRNS-VHLFHSSYSLQWL 161 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~S-vd~~~Ss~alHWL 161 (269)
..+.+++ ...+|+++ +|++++..++|++
T Consensus 143 --~~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~ 171 (235)
T 1jg1_A 143 --HVILGDG-SKGFPPKAPYDVIIVTAGAPKI 171 (235)
T ss_dssp --EEEESCG-GGCCGGGCCEEEEEECSBBSSC
T ss_pred --EEEECCc-ccCCCCCCCccEEEECCcHHHH
Confidence 2233666 44556554 9999998888763
No 150
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.83 E-value=0.00011 Score=64.84 Aligned_cols=126 Identities=14% Similarity=0.171 Sum_probs=71.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ +.. |..+|+..|.... . +........ ..+. .+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la--------~~~-------~~~~v~~vD~s~~-~------l~~a~~n~~-~~~~-----~~ 160 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALA--------SER-------PDCEIIAVDRMPD-A------VSLAQRNAQ-HLAI-----KN 160 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHH--------HHC-------TTSEEEEECSSHH-H------HHHHHHHHH-HHTC-----CS
T ss_pred CCCEEEEecCCccHHHHHHH--------HhC-------CCCEEEEEECCHH-H------HHHHHHHHH-HcCC-----Cc
Confidence 35799999999999888776 432 5689999997654 0 111111111 1121 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccccccccc--CCCCCCC--CCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ--VPDGLES--NKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~--~P~~l~~--nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 205 (269)
+..+.+++.. .+|++++|+++|+...++... ++..+.. ....++ . ......++..+++.=.
T Consensus 161 --v~~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~----~--------~~~g~~~~~~~l~~~~ 225 (276)
T 2b3t_A 161 --IHILQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALV----A--------ADSGMADIVHIIEQSR 225 (276)
T ss_dssp --EEEECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTB----C--------HHHHTHHHHHHHHHHG
T ss_pred --eEEEEcchhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHc----C--------CCcHHHHHHHHHHHHH
Confidence 2223467665 466789999999866665433 0000000 000000 0 0112345667777667
Q ss_pred hhhccCCeEEEEe
Q 024331 206 EELVAEGRMVLTF 218 (269)
Q Consensus 206 ~EL~pGG~lv~~~ 218 (269)
+-|+|||.+++..
T Consensus 226 ~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 226 NALVSGGFLLLEH 238 (276)
T ss_dssp GGEEEEEEEEEEC
T ss_pred HhcCCCCEEEEEE
Confidence 8899999999963
No 151
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.81 E-value=0.00013 Score=63.10 Aligned_cols=76 Identities=21% Similarity=0.162 Sum_probs=46.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ +.. .|..+|+..|+... + +....+.+. ..+. .+
T Consensus 93 ~~~~vldiG~G~G~~~~~l~--------~~~------~~~~~v~~~D~~~~-~------~~~a~~~~~-~~~~-----~~ 145 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLA--------NIV------GPEGRVVSYEIRED-F------AKLAWENIK-WAGF-----DD 145 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------CTTSEEEEECSCHH-H------HHHHHHHHH-HHTC-----TT
T ss_pred CCCEEEEecCCchHHHHHHH--------HHh------CCCeEEEEEecCHH-H------HHHHHHHHH-HcCC-----CC
Confidence 45799999999999988777 432 15678999988653 1 111111111 1121 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEec
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHS 154 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~S 154 (269)
.+..+.+++.. .+|++++|++++
T Consensus 146 -~v~~~~~d~~~-~~~~~~~D~v~~ 168 (255)
T 3mb5_A 146 -RVTIKLKDIYE-GIEEENVDHVIL 168 (255)
T ss_dssp -TEEEECSCGGG-CCCCCSEEEEEE
T ss_pred -ceEEEECchhh-ccCCCCcCEEEE
Confidence 12223477774 489999999998
No 152
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.81 E-value=8.9e-05 Score=68.27 Aligned_cols=78 Identities=14% Similarity=0.258 Sum_probs=46.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ ++ +..+|+..|+. . . + ... .+..+ ..+.. .+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la--------~~--------g~~~V~~vD~s-~-~--~-~~a---~~~~~-~~~l~----~~ 100 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAA--------QA--------GARKIYAVEAS-T-M--A-QHA---EVLVK-SNNLT----DR 100 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEECS-T-H--H-HHH---HHHHH-HTTCT----TT
T ss_pred CcCEEEEcCCCccHHHHHHH--------hC--------CCCEEEEECCH-H-H--H-HHH---HHHHH-HcCCC----Cc
Confidence 35799999999999887665 32 33689999985 2 2 1 111 11111 12211 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQ 159 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alH 159 (269)
+ ..+.+++....+| +++|+++|...++
T Consensus 101 v--~~~~~d~~~~~~~-~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 101 I--VVIPGKVEEVSLP-EQVDIIISEPMGY 127 (348)
T ss_dssp E--EEEESCTTTCCCS-SCEEEEEECCCBT
T ss_pred E--EEEEcchhhCCCC-CceeEEEEeCchh
Confidence 2 2234777776666 6899999976544
No 153
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.81 E-value=6.2e-05 Score=64.35 Aligned_cols=89 Identities=15% Similarity=0.096 Sum_probs=49.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCC---CCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGS---ASGA 126 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~---~~~~ 126 (269)
...+|+|+|||+|..+..+. +.+...+ ..+..+|+..|.... . .+ ...+.+... +. ..
T Consensus 84 ~~~~VLdiG~G~G~~~~~la--------~~~~~~~-~~~~~~v~~vD~~~~-~---~~---~a~~~~~~~-~~~~~~~-- 144 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFY--------RYIKAKG-VDADTRIVGIEHQAE-L---VR---RSKANLNTD-DRSMLDS-- 144 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHHHHSC-CCTTCEEEEEESCHH-H---HH---HHHHHHHHH-HHHHHHH--
T ss_pred CCCEEEEECCCccHHHHHHH--------Hhccccc-CCccCEEEEEEcCHH-H---HH---HHHHHHHhc-CccccCC--
Confidence 35799999999999988777 3321100 113458899987553 1 11 111111110 00 00
Q ss_pred CCceEEeecCCCccCCCCCC-CceeeEecccccccc
Q 024331 127 AGQCFFTGVPGSFYGRLFPR-NSVHLFHSSYSLQWL 161 (269)
Q Consensus 127 ~~~~f~~~vpgSFy~~lfP~-~Svd~~~Ss~alHWL 161 (269)
..-.++. ++... .+|+ +++|++++..++|++
T Consensus 145 ~~v~~~~---~d~~~-~~~~~~~fD~I~~~~~~~~~ 176 (227)
T 1r18_A 145 GQLLIVE---GDGRK-GYPPNAPYNAIHVGAAAPDT 176 (227)
T ss_dssp TSEEEEE---SCGGG-CCGGGCSEEEEEECSCBSSC
T ss_pred CceEEEE---CCccc-CCCcCCCccEEEECCchHHH
Confidence 0112333 66665 4565 899999998888763
No 154
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.80 E-value=7.3e-05 Score=65.32 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=28.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
++.+|+|+|||+|..++.++ +.+ ++..+|+..|+...
T Consensus 63 ~~~~VLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~s~~ 99 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMA--------REL------PADGQLLTLEADAH 99 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHH--------TTS------CTTCEEEEEECCHH
T ss_pred CCCEEEEecCCchHHHHHHH--------HhC------CCCCEEEEEECCHH
Confidence 35799999999999998777 432 23689999998543
No 155
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.78 E-value=5.6e-05 Score=66.23 Aligned_cols=126 Identities=10% Similarity=0.029 Sum_probs=66.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ ++ .+ .+|+..|+...= +........ ..+.. .+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la--------~~-------~~-~~v~gvDi~~~~-------~~~a~~n~~-~~~~~----~~ 100 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLS--------TR-------TK-AKIVGVEIQERL-------ADMAKRSVA-YNQLE----DQ 100 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHH--------TT-------CC-CEEEEECCSHHH-------HHHHHHHHH-HTTCT----TT
T ss_pred CCCEEEEcCCchhHHHHHHH--------Hh-------cC-CcEEEEECCHHH-------HHHHHHHHH-HCCCc----cc
Confidence 46799999999999888766 32 13 389999986540 111111111 11211 12
Q ss_pred eEEeecCCCccCCC--CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 130 CFFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 130 ~f~~~vpgSFy~~l--fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
+ ..+-+++.... +|++++|+++|+-..+..... .+. ++....+.-......++..|++.=.+-
T Consensus 101 v--~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~--~~~-----------~~~~~~~~a~~~~~~~~~~~l~~~~~~ 165 (259)
T 3lpm_A 101 I--EIIEYDLKKITDLIPKERADIVTCNPPYFATPDT--SLK-----------NTNEHFRIARHEVMCTLEDTIRVAASL 165 (259)
T ss_dssp E--EEECSCGGGGGGTSCTTCEEEEEECCCC------------------------------------HHHHHHHHHHHHH
T ss_pred E--EEEECcHHHhhhhhccCCccEEEECCCCCCCccc--cCC-----------CCchHHHhhhccccCCHHHHHHHHHHH
Confidence 2 22336776644 678999999995433321000 000 000000000111235677788887888
Q ss_pred hccCCeEEEEe
Q 024331 208 LVAEGRMVLTF 218 (269)
Q Consensus 208 L~pGG~lv~~~ 218 (269)
|+|||++++..
T Consensus 166 LkpgG~l~~~~ 176 (259)
T 3lpm_A 166 LKQGGKANFVH 176 (259)
T ss_dssp EEEEEEEEEEE
T ss_pred ccCCcEEEEEE
Confidence 99999999964
No 156
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.78 E-value=0.00035 Score=60.53 Aligned_cols=37 Identities=22% Similarity=0.110 Sum_probs=27.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
.+.+|+|+|||+|..++.+++.+ +. +..+|+..|+..
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~------~~-------~~~~v~gvDis~ 87 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLH------RR-------SLRQVIASDVDP 87 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHT------GG-------GEEEEEEEESCH
T ss_pred CCCeEEECCCCCCHHHHHHHHHh------cc-------CCCeEEEEECCH
Confidence 46899999999998877766221 01 457899999754
No 157
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.77 E-value=3.7e-05 Score=67.84 Aligned_cols=123 Identities=20% Similarity=0.179 Sum_probs=68.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-C---CCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-G---SASG 125 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~---~~~~ 125 (269)
...+|+|+|||+|..++.++ +++ |..+|+..|+-.. . .+..+++. . .++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la--------~~~-------~~~~v~gvDi~~~----------~-~~~a~~n~~~~~~~~l- 88 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVA--------ARL-------EKAEVTLYERSQE----------M-AEFARRSLELPDNAAF- 88 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHH--------HHC-------TTEEEEEEESSHH----------H-HHHHHHHTTSGGGTTT-
T ss_pred CCCEEEEeCChHhHHHHHHH--------HhC-------CCCeEEEEECCHH----------H-HHHHHHHHHhhhhCCC-
Confidence 45799999999999988777 443 5689999997553 1 11122221 1 111
Q ss_pred CCCceEEeecCCCccCC-------CCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHH-HHHHH
Q 024331 126 AAGQCFFTGVPGSFYGR-------LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQ-FQRDF 197 (269)
Q Consensus 126 ~~~~~f~~~vpgSFy~~-------lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q-~~~D~ 197 (269)
..++- .+-+++... .++++++|+++++--.++... .. .+...++.+.. ...++
T Consensus 89 -~~~v~--~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~----------~~------~~~~~~~~a~~~~~~~~ 149 (260)
T 2ozv_A 89 -SARIE--VLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGD----------RR------TPDALKAEAHAMTEGLF 149 (260)
T ss_dssp -GGGEE--EEECCTTCCHHHHHHTTCCTTCEEEEEECCCC-------------------------------------CCH
T ss_pred -cceEE--EEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCC----------CC------CcCHHHHHHhhcCcCCH
Confidence 01122 233677664 478899999999644443210 00 00011111110 11236
Q ss_pred HHHHhhhhhhhccCCeEEEEe
Q 024331 198 SLFLKCRSEELVAEGRMVLTF 218 (269)
Q Consensus 198 ~~FL~~Ra~EL~pGG~lv~~~ 218 (269)
..||+.=++-|+|||++++..
T Consensus 150 ~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 150 EDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEE
Confidence 677777778899999999965
No 158
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.76 E-value=0.00015 Score=74.69 Aligned_cols=87 Identities=17% Similarity=0.130 Sum_probs=56.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcC---CCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG---SASGA 126 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~---~~~~~ 126 (269)
...+|+|+|||+|..++.++ ++ ..|..+|+..|+... .+..-.+.+..... .+.
T Consensus 721 ~g~rVLDVGCGTG~lai~LA--------r~------g~p~a~VtGVDIS~e-------mLe~AReRLa~~lnAkr~gl-- 777 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLL--------DY------PTSLQTIIGVDISPK-------GLARAAKMLHVKLNKEACNV-- 777 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHT--------SS------CCCCCEEEEEESCHH-------HHHHHHHHHHHHTTTTCSSC--
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh------CCCCCeEEEEECCHH-------HHHHHHHHhhhccchhhcCC--
Confidence 45799999999999988776 32 124579999998764 11111111111100 111
Q ss_pred CCceEEeecCCCccCCCCCCCceeeEeccccccccc
Q 024331 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLS 162 (269)
Q Consensus 127 ~~~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS 162 (269)
. -+..+-|++....++++++|++++..++||+.
T Consensus 778 -~--nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~ 810 (950)
T 3htx_A 778 -K--SATLYDGSILEFDSRLHDVDIGTCLEVIEHME 810 (950)
T ss_dssp -S--EEEEEESCTTSCCTTSCSCCEEEEESCGGGSC
T ss_pred -C--ceEEEECchHhCCcccCCeeEEEEeCchhhCC
Confidence 1 22233489999999999999999999999963
No 159
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.76 E-value=0.00014 Score=69.75 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=28.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
...+|+|+|||+|..++.++ +.+ +..+|+..|+...
T Consensus 242 ~g~~VLDLGCGsG~la~~LA--------~~~-------g~~~V~GVDis~~ 277 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAA--------LEC-------GCALSFGCEIMDD 277 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH-------CCSEEEEEECCHH
T ss_pred CCCEEEEeCCCcCHHHHHHH--------HHC-------CCCEEEEEeCCHH
Confidence 46799999999999998877 543 3357899988664
No 160
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.75 E-value=9.4e-05 Score=67.69 Aligned_cols=72 Identities=15% Similarity=0.100 Sum_probs=45.8
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHH---hcCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASG 125 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~---~~~~~~~ 125 (269)
..+.+|+|+|||+|+.|..++ .+. +..+|+..|+... +. +..++ +.|..
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~l--------A~~-------~ga~V~gIDis~~----------~l-~~Ar~~~~~~gl~-- 172 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILL--------SHV-------YGMRVNVVEIEPD----------IA-ELSRKVIEGLGVD-- 172 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHH--------HHT-------TCCEEEEEESSHH----------HH-HHHHHHHHHHTCC--
T ss_pred CCcCEEEEECCCccHHHHHHH--------HHc-------cCCEEEEEECCHH----------HH-HHHHHHHHhcCCC--
Confidence 457899999999998776555 221 4578999998664 21 11221 12221
Q ss_pred CCCceEEeecCCCccCCCCCCCceeeEecc
Q 024331 126 AAGQCFFTGVPGSFYGRLFPRNSVHLFHSS 155 (269)
Q Consensus 126 ~~~~~f~~~vpgSFy~~lfP~~Svd~~~Ss 155 (269)
+--|+. |++.. +|++++|++++.
T Consensus 173 --~v~~v~---gDa~~--l~d~~FDvV~~~ 195 (298)
T 3fpf_A 173 --GVNVIT---GDETV--IDGLEFDVLMVA 195 (298)
T ss_dssp --SEEEEE---SCGGG--GGGCCCSEEEEC
T ss_pred --CeEEEE---Cchhh--CCCCCcCEEEEC
Confidence 123444 66666 478999999974
No 161
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.70 E-value=4.4e-05 Score=65.33 Aligned_cols=69 Identities=13% Similarity=0.121 Sum_probs=45.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..+..++ ++ ..+|+..|+... +. +..+++ .. .-
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~~----------~~-~~a~~~-~~-----~~ 93 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFG--------PQ---------AARWAAYDFSPE----------LL-KLARAN-AP-----HA 93 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHG--------GG---------SSEEEEEESCHH----------HH-HHHHHH-CT-----TS
T ss_pred CCCeEEEeCCCCCHHHHHHH--------Hc---------CCEEEEEECCHH----------HH-HHHHHh-CC-----Cc
Confidence 45799999999999887666 32 268899997654 21 222222 11 12
Q ss_pred eEEeecCCCc-cCCCCC-CCceeeEecc
Q 024331 130 CFFTGVPGSF-YGRLFP-RNSVHLFHSS 155 (269)
Q Consensus 130 ~f~~~vpgSF-y~~lfP-~~Svd~~~Ss 155 (269)
.|+. +++ ....++ ++++|+++|+
T Consensus 94 ~~~~---~d~~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 94 DVYE---WNGKGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp EEEE---CCSCSSCCTTCCCCEEEEEEE
T ss_pred eEEE---cchhhccCCcCCCCEEEEEeC
Confidence 3444 666 456678 8999999985
No 162
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.70 E-value=7.5e-05 Score=61.09 Aligned_cols=78 Identities=12% Similarity=-0.016 Sum_probs=46.9
Q ss_pred CCccCCCC---CCCceeeEecccccccc-ccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccCC
Q 024331 137 GSFYGRLF---PRNSVHLFHSSYSLQWL-SQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEG 212 (269)
Q Consensus 137 gSFy~~lf---P~~Svd~~~Ss~alHWL-S~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG 212 (269)
+++....+ |++++|+++|++++||+ .+. ..+.++. ++-|||||
T Consensus 49 ~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~------------------~~~l~~~---------------~r~LkpgG 95 (176)
T 2ld4_A 49 ENIKQLLQSAHKESSFDIILSGLVPGSTTLHS------------------AEILAEI---------------ARILRPGG 95 (176)
T ss_dssp EEGGGGGGGCCCSSCEEEEEECCSTTCCCCCC------------------HHHHHHH---------------HHHEEEEE
T ss_pred echhcCccccCCCCCEeEEEECChhhhcccCH------------------HHHHHHH---------------HHHCCCCE
Confidence 44555445 89999999999999997 221 1122222 56778999
Q ss_pred eEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHHccCcc
Q 024331 213 RMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEVTKS 252 (269)
Q Consensus 213 ~lv~~~~g~~~~~~~~~~~~~~~~~l~~~l~~mv~eG~i~ 252 (269)
++++............ + .....+....|.+.|++.
T Consensus 96 ~l~~~~~~~~~~~~~~----~-~~~~~~~~~~l~~aGfi~ 130 (176)
T 2ld4_A 96 CLFLKEPVETAVDNNS----K-VKTASKLCSALTLSGLVE 130 (176)
T ss_dssp EEEEEEEEESSSCSSS----S-SCCHHHHHHHHHHTTCEE
T ss_pred EEEEEccccccccccc----c-cCCHHHHHHHHHHCCCcE
Confidence 9999655332211100 0 012455566677888844
No 163
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.70 E-value=0.00022 Score=61.36 Aligned_cols=77 Identities=14% Similarity=0.023 Sum_probs=47.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ +.. .|..+|+..|.... . +....+.+....|. .+
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~--------~~~------~~~~~v~~~D~~~~-~------~~~a~~~~~~~~g~-----~~ 149 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLA--------RAV------GEKGLVESYEARPH-H------LAQAERNVRAFWQV-----EN 149 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------CTTSEEEEEESCHH-H------HHHHHHHHHHHCCC-----CC
T ss_pred CCCEEEEECCCcCHHHHHHH--------HHh------CCCCEEEEEeCCHH-H------HHHHHHHHHHhcCC-----CC
Confidence 45799999999999988777 432 14578999987543 1 11111111111021 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEec
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHS 154 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~S 154 (269)
+- .+.+++....+|++++|++++
T Consensus 150 v~--~~~~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 150 VR--FHLGKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp EE--EEESCGGGCCCCTTCEEEEEE
T ss_pred EE--EEECchhhcCCCCCCcCEEEE
Confidence 22 223788776789999999997
No 164
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.68 E-value=7.5e-05 Score=65.76 Aligned_cols=75 Identities=19% Similarity=0.145 Sum_probs=46.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ ..+ |..+|+..|.... . +....+ ..++.+. .+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la--------~~~-------~~~~v~~vD~s~~-~------~~~a~~-~~~~~~l-----~~ 131 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLK--------IVR-------PELELVLVDATRK-K------VAFVER-AIEVLGL-----KG 131 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHH--------HHC-------TTCEEEEEESCHH-H------HHHHHH-HHHHHTC-----SS
T ss_pred CCCEEEEEcCCCCHHHHHHH--------HHC-------CCCEEEEEECCHH-H------HHHHHH-HHHHhCC-----Cc
Confidence 46799999999999998877 432 6789999997654 1 111111 1112222 22
Q ss_pred eEEeecCCCccCCCC---CCCceeeEec
Q 024331 130 CFFTGVPGSFYGRLF---PRNSVHLFHS 154 (269)
Q Consensus 130 ~f~~~vpgSFy~~lf---P~~Svd~~~S 154 (269)
+..+.++...... .++++|+++|
T Consensus 132 --v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 132 --ARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp --EEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred --eEEEECcHHHhhcccccCCCceEEEE
Confidence 2223466666443 3589999998
No 165
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.67 E-value=6e-05 Score=61.59 Aligned_cols=110 Identities=9% Similarity=-0.129 Sum_probs=62.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ ++ +..+|+..|+... . +......... .+.. .+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~--------~~--------~~~~v~~vD~~~~-~------~~~a~~~~~~-~~~~----~~ 95 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAV--------SR--------GMDKSICIEKNFA-A------LKVIKENIAI-TKEP----EK 95 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHH--------HT--------TCSEEEEEESCHH-H------HHHHHHHHHH-HTCG----GG
T ss_pred CCCCEEEeCCccCHHHHHHH--------Hc--------CCCEEEEEECCHH-H------HHHHHHHHHH-hCCC----cc
Confidence 45799999999999988765 32 2368999997543 1 1111111111 1110 12
Q ss_pred -eEEeecCCCccCCC----CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 024331 130 -CFFTGVPGSFYGRL----FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (269)
Q Consensus 130 -~f~~~vpgSFy~~l----fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 204 (269)
.++. +++...+ ++++++|++++...+|+- ..+.+ +. .+. .
T Consensus 96 ~~~~~---~d~~~~~~~~~~~~~~fD~i~~~~~~~~~-------------------~~~~~-----------~~-~l~-~ 140 (187)
T 2fhp_A 96 FEVRK---MDANRALEQFYEEKLQFDLVLLDPPYAKQ-------------------EIVSQ-----------LE-KML-E 140 (187)
T ss_dssp EEEEE---SCHHHHHHHHHHTTCCEEEEEECCCGGGC-------------------CHHHH-----------HH-HHH-H
T ss_pred eEEEE---CcHHHHHHHHHhcCCCCCEEEECCCCCch-------------------hHHHH-----------HH-HHH-H
Confidence 2333 6765522 237899999986443320 01111 11 122 2
Q ss_pred hhhhccCCeEEEEecccC
Q 024331 205 SEELVAEGRMVLTFLGRK 222 (269)
Q Consensus 205 a~EL~pGG~lv~~~~g~~ 222 (269)
.+-|+|||.+++......
T Consensus 141 ~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 141 RQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp TTCEEEEEEEEEEEETTC
T ss_pred hcccCCCCEEEEEeCCcc
Confidence 677899999999876654
No 166
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.67 E-value=0.0002 Score=63.25 Aligned_cols=75 Identities=9% Similarity=0.048 Sum_probs=46.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (269)
...+|+|+|||+|..++.++ +.. .|..+|+..|+... . +....+.+. .. |. .
T Consensus 110 ~~~~VLD~G~G~G~~~~~la--------~~~------~~~~~v~~vD~s~~-~------~~~a~~~~~-~~~g~-----~ 162 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYIL--------YAL------NGKGTLTVVERDED-N------LKKAMDNLS-EFYDI-----G 162 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------TTSSEEEEECSCHH-H------HHHHHHHHH-TTSCC-----T
T ss_pred CcCEEEEecCCCCHHHHHHH--------HHc------CCCCEEEEEECCHH-H------HHHHHHHHH-hcCCC-----C
Confidence 45799999999999888777 331 14578999997553 0 111111111 11 21 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEec
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHS 154 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~S 154 (269)
++- .+.+++.. .+|++++|++++
T Consensus 163 ~v~--~~~~d~~~-~~~~~~fD~Vi~ 185 (275)
T 1yb2_A 163 NVR--TSRSDIAD-FISDQMYDAVIA 185 (275)
T ss_dssp TEE--EECSCTTT-CCCSCCEEEEEE
T ss_pred cEE--EEECchhc-cCcCCCccEEEE
Confidence 222 23377776 778899999998
No 167
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.67 E-value=6.7e-05 Score=63.43 Aligned_cols=34 Identities=15% Similarity=-0.032 Sum_probs=25.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
..+|+|+|||+|..++.++ .+. ..+|+..|+...
T Consensus 54 ~~~vLDlGcGtG~~~~~~~--------~~~--------~~~v~gvD~s~~ 87 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEAL--------SRQ--------AKKVTFLELDKT 87 (201)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HTT--------CSEEEEECSCHH
T ss_pred CCeEEEcCCccCHHHHHHH--------Hcc--------CCEEEEEECCHH
Confidence 4699999999999988755 321 147999997654
No 168
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.65 E-value=4.5e-06 Score=71.85 Aligned_cols=86 Identities=17% Similarity=0.089 Sum_probs=54.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ +. ..+|+..|+... .+......+. ..+..- .-
T Consensus 78 ~~~~vLD~gcG~G~~~~~la--------~~---------~~~v~~vD~s~~-------~~~~a~~~~~-~~~~~~---~~ 129 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFA--------LT---------GMRVIAIDIDPV-------KIALARNNAE-VYGIAD---KI 129 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHH--------HT---------TCEEEEEESCHH-------HHHHHHHHHH-HTTCGG---GE
T ss_pred CCCEEEECccccCHHHHHHH--------Hc---------CCEEEEEECCHH-------HHHHHHHHHH-HcCCCc---Ce
Confidence 35799999999999998877 32 268899987654 0111111111 111100 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCC
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDG 167 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~ 167 (269)
.|+. +++...+ +++++|++++...+||.......
T Consensus 130 ~~~~---~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~~ 163 (241)
T 3gdh_A 130 EFIC---GDFLLLA-SFLKADVVFLSPPWGGPDYATAE 163 (241)
T ss_dssp EEEE---SCHHHHG-GGCCCSEEEECCCCSSGGGGGSS
T ss_pred EEEE---CChHHhc-ccCCCCEEEECCCcCCcchhhhH
Confidence 3333 7777655 78899999999999998765543
No 169
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.65 E-value=9.9e-05 Score=65.98 Aligned_cols=154 Identities=14% Similarity=0.051 Sum_probs=89.7
Q ss_pred HHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHH
Q 024331 33 KPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASF 112 (269)
Q Consensus 33 ~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~ 112 (269)
+|.++.--..+... +.+-+|+|+|||+|+.++..+ |...++..|+-.. +=.+
T Consensus 90 Lp~ld~fY~~i~~~--~~p~~VLDlGCG~gpLal~~~------------------~~~~y~a~DId~~--------~i~~ 141 (253)
T 3frh_A 90 LAELDTLYDFIFSA--ETPRRVLDIACGLNPLALYER------------------GIASVWGCDIHQG--------LGDV 141 (253)
T ss_dssp GGGHHHHHHHHTSS--CCCSEEEEETCTTTHHHHHHT------------------TCSEEEEEESBHH--------HHHH
T ss_pred hhhHHHHHHHHhcC--CCCCeEEEecCCccHHHHHhc------------------cCCeEEEEeCCHH--------HHHH
Confidence 45555444443332 457899999999998877544 4689999998765 1111
Q ss_pred HHHHHHhcCCCCCCCCceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHH
Q 024331 113 QKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQ 192 (269)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q 192 (269)
....-...|. +--|.. .++...++|. +.|++.++-++|-|.+-.... ..
T Consensus 142 ar~~~~~~g~-----~~~~~v---~D~~~~~~~~-~~DvvLllk~lh~LE~q~~~~----------------~~------ 190 (253)
T 3frh_A 142 ITPFAREKDW-----DFTFAL---QDVLCAPPAE-AGDLALIFKLLPLLEREQAGS----------------AM------ 190 (253)
T ss_dssp HHHHHHHTTC-----EEEEEE---CCTTTSCCCC-BCSEEEEESCHHHHHHHSTTH----------------HH------
T ss_pred HHHHHHhcCC-----CceEEE---eecccCCCCC-CcchHHHHHHHHHhhhhchhh----------------HH------
Confidence 1111112222 123333 6777777666 999999999999997755421 11
Q ss_pred HHHHHHHHHhhhhhhhccCCeEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHHccCcccccccceeccc
Q 024331 193 FQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEVTKSFLLLIVFNQLN 263 (269)
Q Consensus 193 ~~~D~~~FL~~Ra~EL~pGG~lv~~~~g~~~~~~~~~~~~~~~~~l~~~l~~mv~eG~i~~~~~d~FnlP~ 263 (269)
++|. +|+++ .++++++.+.=.++.- .|.+.=...|...+.+.. +.++.|.+++
T Consensus 191 ------~ll~----aL~~~-~vvVsfPtksl~Gr~~----gm~~~Y~~~~e~~~~~~~---~~~~~~~~~n 243 (253)
T 3frh_A 191 ------ALLQ----SLNTP-RMAVSFPTRSLGGRGK----GMEANYAAWFEGGLPAEF---EIEDKKTIGT 243 (253)
T ss_dssp ------HHHH----HCBCS-EEEEEEECC---------------CHHHHHHHHSCTTE---EEEEEEEETT
T ss_pred ------HHHH----HhcCC-CEEEEcChHHhcCCCc----chhhHHHHHHHHHhhccc---hhhhheecCc
Confidence 2222 67776 6778888554333321 123445566777777766 7777777765
No 170
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.63 E-value=0.00034 Score=61.24 Aligned_cols=79 Identities=16% Similarity=0.136 Sum_probs=48.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ +.. .|..+|+..|+... . +....+......|.-. .+
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~--------~~~------~~~~~v~~vD~~~~-~------~~~a~~~~~~~~g~~~---~~ 154 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLL--------RAV------GPAGQVISYEQRAD-H------AEHARRNVSGCYGQPP---DN 154 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------CTTSEEEEECSCHH-H------HHHHHHHHHHHHTSCC---TT
T ss_pred CCCEEEEEcccccHHHHHHH--------HHh------CCCCEEEEEeCCHH-H------HHHHHHHHHHhcCCCC---Cc
Confidence 35699999999999988777 432 14578999987443 1 1111111111101000 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEec
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHS 154 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~S 154 (269)
+ ..+.+++....++++++|++++
T Consensus 155 v--~~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 155 W--RLVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp E--EEECSCGGGCCCCTTCEEEEEE
T ss_pred E--EEEECchHhcCCCCCceeEEEE
Confidence 2 2234788888888999999998
No 171
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.62 E-value=0.00095 Score=56.63 Aligned_cols=36 Identities=22% Similarity=0.187 Sum_probs=27.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
...+|+|+|||+|..++.++ ++. .|..+|+..|...
T Consensus 73 ~~~~vLDlG~G~G~~~~~la--------~~~------~~~~~v~~vD~s~ 108 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVS--------DIV------GWEGKIFGIEFSP 108 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHH--------HHH------CTTSEEEEEESCH
T ss_pred CCCEEEEEeccCCHHHHHHH--------HHh------CCCeEEEEEECCH
Confidence 45699999999999998877 443 1346788888654
No 172
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.60 E-value=8.6e-05 Score=63.26 Aligned_cols=37 Identities=14% Similarity=0.318 Sum_probs=28.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
++.+|+|+|||+|..|+.++ +.+ ++..+|+..|+...
T Consensus 58 ~~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~~ 94 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMA--------RLL------QPGARLLTMEINPD 94 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHH--------TTS------CTTCEEEEEESCHH
T ss_pred CCCEEEEECCCCCHHHHHHH--------HhC------CCCCEEEEEeCChH
Confidence 35799999999999999877 321 24678999998654
No 173
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.60 E-value=0.00011 Score=63.54 Aligned_cols=36 Identities=19% Similarity=0.004 Sum_probs=29.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
..-+|+|+|||+|..++.++ ++ .|..+|+..|+...
T Consensus 24 ~~~~vLDiGCG~G~~~~~la--------~~-------~~~~~v~GvD~s~~ 59 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLA--------IN-------DQNTFYIGIDPVKE 59 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHH--------HT-------CTTEEEEEECSCCG
T ss_pred CCCEEEEEeccCcHHHHHHH--------Hh-------CCCCEEEEEeCCHH
Confidence 45799999999999888776 33 26799999999844
No 174
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.60 E-value=0.00023 Score=62.49 Aligned_cols=76 Identities=18% Similarity=0.215 Sum_probs=44.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.+. +. + + +|+..|+...= +....+.... .+ . .
T Consensus 120 ~~~~VLDiGcG~G~l~~~la--------~~----g---~--~v~gvDi~~~~-------v~~a~~n~~~-~~--~----~ 168 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAE--------KL----G---G--KALGVDIDPMV-------LPQAEANAKR-NG--V----R 168 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT----T---C--EEEEEESCGGG-------HHHHHHHHHH-TT--C----C
T ss_pred CCCEEEEecCCCcHHHHHHH--------Hh----C---C--eEEEEECCHHH-------HHHHHHHHHH-cC--C----c
Confidence 35799999999998877654 32 1 2 89999986541 1111111111 11 1 1
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQ 159 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alH 159 (269)
+..+.+++... +|++++|+++++...|
T Consensus 169 --v~~~~~d~~~~-~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 169 --PRFLEGSLEAA-LPFGPFDLLVANLYAE 195 (254)
T ss_dssp --CEEEESCHHHH-GGGCCEEEEEEECCHH
T ss_pred --EEEEECChhhc-CcCCCCCEEEECCcHH
Confidence 22223565553 6788999999864433
No 175
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.60 E-value=0.00011 Score=62.21 Aligned_cols=77 Identities=10% Similarity=-0.023 Sum_probs=44.5
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCCc
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAGQ 129 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~~ 129 (269)
..+|+|+|||+|..++.++ ++. .-+|+..|+... +. +.++++. ..+. ..-
T Consensus 55 ~~~vLDlgcG~G~~~~~l~--------~~~--------~~~V~~vD~s~~----------~l-~~a~~~~~~~~~--~~v 105 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEAL--------SRY--------AAGATLIEMDRA----------VS-QQLIKNLATLKA--GNA 105 (202)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HTT--------CSEEEEECSCHH----------HH-HHHHHHHHHTTC--CSE
T ss_pred CCeEEEeCCCcCHHHHHHH--------hcC--------CCEEEEEECCHH----------HH-HHHHHHHHHcCC--CcE
Confidence 4699999999999988765 321 137999997654 21 1121111 0111 011
Q ss_pred eEEeecCCCccC-CCCCCCceeeEecccccc
Q 024331 130 CFFTGVPGSFYG-RLFPRNSVHLFHSSYSLQ 159 (269)
Q Consensus 130 ~f~~~vpgSFy~-~lfP~~Svd~~~Ss~alH 159 (269)
.|+ -+++.. ..++++++|++++...+|
T Consensus 106 ~~~---~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 106 RVV---NSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp EEE---CSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred EEE---ECCHHHHHhhcCCCCCEEEECCCCC
Confidence 233 367655 344678999999854433
No 176
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.59 E-value=0.00035 Score=60.61 Aligned_cols=36 Identities=28% Similarity=0.403 Sum_probs=29.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+..+|+|+|||+|..++.++ +.. |..+|+..|....
T Consensus 49 ~~~~vLDiGcG~G~~~~~la--------~~~-------~~~~v~gvD~s~~ 84 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLS--------PAF-------PEDLILGMEIRVQ 84 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHH--------HHS-------TTSEEEEEESCHH
T ss_pred CCCEEEEEcCCCCHHHHHHH--------HhC-------CCCCEEEEEcCHH
Confidence 45799999999999998877 542 5678999997654
No 177
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.58 E-value=0.00011 Score=58.97 Aligned_cols=34 Identities=18% Similarity=-0.004 Sum_probs=25.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+..+|+|+|||+|..++.++ ++. + +|+..|+...
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~--------~~~-------~--~v~~vD~~~~ 74 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAA--------SEG-------W--EAVLVEKDPE 74 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHH--------HTT-------C--EEEEECCCHH
T ss_pred CCCeEEEeCCCcCHHHHHHH--------HCC-------C--eEEEEeCCHH
Confidence 35799999999999888776 331 3 3899997543
No 178
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.57 E-value=0.00015 Score=65.70 Aligned_cols=149 Identities=13% Similarity=0.046 Sum_probs=76.0
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHH-hhHHHHHHHHHhcCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFR-SLASFQKILRKQLGSASGAA 127 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~-~l~~~~~~~~~~~~~~~~~~ 127 (269)
+++.+|+|+|||+|..+..++ +. .+..+|+..|+... .-.+.+ .++. +......
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~-~i~~a~~~~~~----~~~~~~~----- 148 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVL--------RH-------GTVEHCDLVDIDGE-VMEQSKQHFPQ----ISRSLAD----- 148 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHH--------TC-------TTCCEEEEEESCHH-HHHHHHHHCHH----HHGGGGC-----
T ss_pred CCCCeEEEEcCCCCHHHHHHH--------hC-------CCCCEEEEEECCHH-HHHHHHHHhHH----hhcccCC-----
Confidence 456899999999999877665 32 24568999997653 101111 0110 0111101
Q ss_pred CceEEeecCCCccCCCC--CCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 024331 128 GQCFFTGVPGSFYGRLF--PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (269)
Q Consensus 128 ~~~f~~~vpgSFy~~lf--P~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 205 (269)
+++-+ +-+++...+. +++++|++++....++. |. .. .|.. .||+.=.
T Consensus 149 ~~v~~--~~~D~~~~~~~~~~~~fDvIi~d~~~~~~---~~------~~-------------l~~~-------~~l~~~~ 197 (304)
T 3bwc_A 149 PRATV--RVGDGLAFVRQTPDNTYDVVIIDTTDPAG---PA------SK-------------LFGE-------AFYKDVL 197 (304)
T ss_dssp TTEEE--EESCHHHHHHSSCTTCEEEEEEECC-------------------------------CCH-------HHHHHHH
T ss_pred CcEEE--EECcHHHHHHhccCCceeEEEECCCCccc---cc------hh-------------hhHH-------HHHHHHH
Confidence 12211 2366655444 58899999996655541 10 00 1111 2222224
Q ss_pred hhhccCCeEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHHccCcccccccceecccc
Q 024331 206 EELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEVTKSFLLLIVFNQLNY 264 (269)
Q Consensus 206 ~EL~pGG~lv~~~~g~~~~~~~~~~~~~~~~~l~~~l~~mv~eG~i~~~~~d~FnlP~~ 264 (269)
+-|+|||+|++..... ... -.......+.|.+.|. +.-.+....+|.|
T Consensus 198 ~~LkpgG~lv~~~~~~-----~~~-----~~~~~~~~~~l~~~GF-~~v~~~~~~vP~y 245 (304)
T 3bwc_A 198 RILKPDGICCNQGESI-----WLD-----LELIEKMSRFIRETGF-ASVQYALMHVPTY 245 (304)
T ss_dssp HHEEEEEEEEEEECCT-----TTC-----HHHHHHHHHHHHHHTC-SEEEEEECCCTTS
T ss_pred HhcCCCcEEEEecCCc-----ccc-----hHHHHHHHHHHHhCCC-CcEEEEEeecccc
Confidence 5677999999974321 111 1235555666666775 2233344556765
No 179
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.49 E-value=0.00023 Score=60.25 Aligned_cols=37 Identities=16% Similarity=0.126 Sum_probs=28.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
++.+|+|+|||+|..++.++ +.+ ++..+|+..|+...
T Consensus 58 ~~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~~ 94 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLA--------RGL------SSGGRVVTLEASEK 94 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHH--------TTC------CSSCEEEEEESCHH
T ss_pred CCCEEEEecCCccHHHHHHH--------HhC------CCCCEEEEEECCHH
Confidence 35799999999999998877 432 23679999997543
No 180
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.49 E-value=0.00021 Score=61.13 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=27.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
..+|+|+|||+|..++.++ +.+ |..+|+..|....
T Consensus 55 ~~~vLdiG~G~G~~~~~la--------~~~-------~~~~v~~vD~~~~ 89 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMA--------QAL-------PEATIVSIERDER 89 (233)
T ss_dssp CSEEEEECCTTSHHHHHHH--------HHC-------TTCEEEEECCCHH
T ss_pred CCEEEEecCCCcHHHHHHH--------HHC-------CCCEEEEEECCHH
Confidence 5699999999999988777 442 3578999997543
No 181
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.49 E-value=0.0012 Score=55.79 Aligned_cols=34 Identities=12% Similarity=0.047 Sum_probs=26.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
...+|+|+|||+|..++.++ ++ ..+|+..|+...
T Consensus 55 ~~~~vLDlGcG~G~~~~~la--------~~---------~~~v~~vD~s~~ 88 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWC--------LA---------GGRAITIEPRAD 88 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT---------TCEEEEEESCHH
T ss_pred CCCEEEEecCCCCHHHHHHH--------Hc---------CCEEEEEeCCHH
Confidence 45799999999999988776 32 267889987553
No 182
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.48 E-value=0.00057 Score=61.37 Aligned_cols=112 Identities=15% Similarity=0.057 Sum_probs=61.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..|..++ ++ .+|+..|+..- +....+ ........+ .+-
T Consensus 82 ~g~~VLDlGcGtG~~s~~la--------~~----------~~V~gVD~s~m--------~~~a~~--~~~~~~~~~-~~v 132 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAA--------SQ----------PNVREVKAYTL--------GTSGHE--KPRLVETFG-WNL 132 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHH--------TS----------TTEEEEEEECC--------CCTTSC--CCCCCCCTT-GGG
T ss_pred CCCEEEEeccCCCHHHHHHH--------Hc----------CCEEEEECchh--------hhhhhh--chhhhhhcC-CCe
Confidence 45799999999999888766 21 46777777542 000000 000000000 011
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.|+. --+++.. +|++++|+++|..+ ++... ...+.+. .+. .|+.-.+-|+
T Consensus 133 ~~~~-~~~D~~~--l~~~~fD~Vvsd~~-~~~~~--------------------~~~d~~~-----~l~-~L~~~~r~Lk 182 (276)
T 2wa2_A 133 ITFK-SKVDVTK--MEPFQADTVLCDIG-ESNPT--------------------AAVEASR-----TLT-VLNVISRWLE 182 (276)
T ss_dssp EEEE-CSCCGGG--CCCCCCSEEEECCC-CCCSC--------------------HHHHHHH-----HHH-HHHHHHHHHH
T ss_pred EEEe-ccCcHhh--CCCCCcCEEEECCC-cCCCc--------------------hhhhHHH-----HHH-HHHHHHHHhc
Confidence 3331 1367766 57899999999766 54210 0011110 111 5555567788
Q ss_pred cCC--eEEEEecc
Q 024331 210 AEG--RMVLTFLG 220 (269)
Q Consensus 210 pGG--~lv~~~~g 220 (269)
||| .+++..+.
T Consensus 183 pGG~~~~v~~~~~ 195 (276)
T 2wa2_A 183 YNQGCGFCVKVLN 195 (276)
T ss_dssp HSTTCEEEEEESC
T ss_pred cCCCcEEEEEeCC
Confidence 999 99987765
No 183
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.48 E-value=0.00048 Score=60.67 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=46.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ ++. .|..+|+..|+... . +....+.+. ..+. ..+
T Consensus 112 ~~~~VLDiG~G~G~~~~~la--------~~~------~~~~~v~~vD~s~~-~------~~~a~~~~~-~~~~----~~~ 165 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLA--------RAV------GSSGKVFAYEKREE-F------AKLAESNLT-KWGL----IER 165 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHT------TTTCEEEEECCCHH-H------HHHHHHHHH-HTTC----GGG
T ss_pred CCCEEEEECCcCCHHHHHHH--------HHh------CCCcEEEEEECCHH-H------HHHHHHHHH-HcCC----CCC
Confidence 35699999999999888776 431 14578999997543 1 111111111 1111 012
Q ss_pred eEEeecCCCccCCCCCCCceeeEec
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHS 154 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~S 154 (269)
+..+.+++... +|++++|++++
T Consensus 166 --v~~~~~d~~~~-~~~~~~D~V~~ 187 (277)
T 1o54_A 166 --VTIKVRDISEG-FDEKDVDALFL 187 (277)
T ss_dssp --EEEECCCGGGC-CSCCSEEEEEE
T ss_pred --EEEEECCHHHc-ccCCccCEEEE
Confidence 22234777765 88899999998
No 184
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.47 E-value=0.00035 Score=56.68 Aligned_cols=102 Identities=18% Similarity=0.207 Sum_probs=58.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ +. - .+|+..|.... . +....+.+. ..+.. .+
T Consensus 33 ~~~~vldiG~G~G~~~~~l~--------~~--------~-~~v~~~D~~~~-~------~~~a~~~~~-~~~~~----~~ 83 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELA--------GR--------V-RRVYAIDRNPE-A------ISTTEMNLQ-RHGLG----DN 83 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------TT--------S-SEEEEEESCHH-H------HHHHHHHHH-HTTCC----TT
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh--------c-CEEEEEECCHH-H------HHHHHHHHH-HcCCC----cc
Confidence 45799999999999887666 32 1 57888887443 0 111111111 11110 12
Q ss_pred -eEEeecCCCccCCCCCC-CceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 130 -CFFTGVPGSFYGRLFPR-NSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 130 -~f~~~vpgSFy~~lfP~-~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
.++. +++.. .+|+ +++|++++...+|+ +..+|+.=.+-
T Consensus 84 ~~~~~---~d~~~-~~~~~~~~D~v~~~~~~~~------------------------------------~~~~l~~~~~~ 123 (192)
T 1l3i_A 84 VTLME---GDAPE-ALCKIPDIDIAVVGGSGGE------------------------------------LQEILRIIKDK 123 (192)
T ss_dssp EEEEE---SCHHH-HHTTSCCEEEEEESCCTTC------------------------------------HHHHHHHHHHT
T ss_pred eEEEe---cCHHH-hcccCCCCCEEEECCchHH------------------------------------HHHHHHHHHHh
Confidence 2322 56555 4555 68999998654432 12233333567
Q ss_pred hccCCeEEEEecc
Q 024331 208 LVAEGRMVLTFLG 220 (269)
Q Consensus 208 L~pGG~lv~~~~g 220 (269)
|+|||.+++....
T Consensus 124 l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 124 LKPGGRIIVTAIL 136 (192)
T ss_dssp EEEEEEEEEEECB
T ss_pred cCCCcEEEEEecC
Confidence 8899999997653
No 185
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.46 E-value=0.00081 Score=56.64 Aligned_cols=107 Identities=15% Similarity=0.134 Sum_probs=63.0
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
.+..+|+|+|||+|..|..++ ++ ..+|+..|+.... .+ . +
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la--------~~---------~~~V~gvD~~~~~------~~------------~-----~ 63 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLN--------SL---------ARKIISIDLQEME------EI------------A-----G 63 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHT--------TT---------CSEEEEEESSCCC------CC------------T-----T
T ss_pred CCCCEEEEEeecCCHHHHHHH--------Hc---------CCcEEEEeccccc------cC------------C-----C
Confidence 346899999999999888776 22 3688999986541 00 0 1
Q ss_pred ceEEeecCCCccCCCC--------C---CCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHH
Q 024331 129 QCFFTGVPGSFYGRLF--------P---RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDF 197 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lf--------P---~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~ 197 (269)
-.|+. |++..... + .+++|+++|..+..+ . |. . ....+ ......
T Consensus 64 v~~~~---~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~--------~---g~--------~-~~d~~--~~~~l~ 118 (191)
T 3dou_A 64 VRFIR---CDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKV--------S---GI--------P-SRDHA--VSYQIG 118 (191)
T ss_dssp CEEEE---CCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCC--------C---SC--------H-HHHHH--HHHHHH
T ss_pred eEEEE---ccccCHHHHHHHHHHhhcccCCcceEEecCCCcCC--------C---CC--------c-ccCHH--HHHHHH
Confidence 13433 67666432 2 148999999543222 1 00 0 01111 122334
Q ss_pred HHHHhhhhhhhccCCeEEEEecc
Q 024331 198 SLFLKCRSEELVAEGRMVLTFLG 220 (269)
Q Consensus 198 ~~FL~~Ra~EL~pGG~lv~~~~g 220 (269)
...|+.=.+-|+|||.|++.++.
T Consensus 119 ~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 119 QRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHccCCCEEEEEEcC
Confidence 45555556788899999987763
No 186
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.45 E-value=0.00071 Score=60.32 Aligned_cols=112 Identities=13% Similarity=0.074 Sum_probs=60.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..|..++ ++ .+|+..|+..- +....+ ........+ .+-
T Consensus 74 ~g~~VLDlGcGtG~~s~~la--------~~----------~~V~gvD~s~m--------~~~a~~--~~~~~~~~~-~~v 124 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAA--------SR----------PHVMDVRAYTL--------GVGGHE--VPRITESYG-WNI 124 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHH--------TS----------TTEEEEEEECC--------CCSSCC--CCCCCCBTT-GGG
T ss_pred CCCEEEEeCcCCCHHHHHHH--------Hc----------CcEEEEECchh--------hhhhhh--hhhhhhccC-CCe
Confidence 45799999999999887766 21 45777776542 000000 000000000 011
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
.|+. --+++.. +|++++|+++|..+ |.... + ..+.. +.+. .|+.-.+-|+
T Consensus 125 ~~~~-~~~D~~~--l~~~~fD~V~sd~~-~~~~~-------------------~-~~d~~-----~~l~-~L~~~~r~Lk 174 (265)
T 2oxt_A 125 VKFK-SRVDIHT--LPVERTDVIMCDVG-ESSPK-------------------W-SVESE-----RTIK-ILELLEKWKV 174 (265)
T ss_dssp EEEE-CSCCTTT--SCCCCCSEEEECCC-CCCSC-------------------H-HHHHH-----HHHH-HHHHHHHHHH
T ss_pred EEEe-cccCHhH--CCCCCCcEEEEeCc-ccCCc-------------------c-chhHH-----HHHH-HHHHHHHHhc
Confidence 3431 0367766 57889999999766 44110 0 00111 0111 5555567788
Q ss_pred cCC--eEEEEecc
Q 024331 210 AEG--RMVLTFLG 220 (269)
Q Consensus 210 pGG--~lv~~~~g 220 (269)
||| .+++..+.
T Consensus 175 pGG~~~fv~kv~~ 187 (265)
T 2oxt_A 175 KNPSADFVVKVLC 187 (265)
T ss_dssp HCTTCEEEEEESC
T ss_pred cCCCeEEEEEeCC
Confidence 999 99997765
No 187
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.41 E-value=0.00054 Score=62.23 Aligned_cols=69 Identities=13% Similarity=0.067 Sum_probs=44.4
Q ss_pred CCceEEEeecCCCCccc----HHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCC
Q 024331 49 PTKVAIADLGCSSGPNT----LLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSAS 124 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns----~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~ 124 (269)
+...+|+|+|||+|.+. ..+. ++. ++..+|+..|+... ++
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs~~~a--------~~~------~~~~~V~gvDis~~--------v~-------------- 105 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGTAVLR--------QWL------PTGTLLVDSDLNDF--------VS-------------- 105 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHH--------HHS------CTTCEEEEEESSCC--------BC--------------
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHH--------HHc------CCCCEEEEEECCCC--------CC--------------
Confidence 34579999999885543 2222 332 23578999999775 11
Q ss_pred CCCCceE-EeecCCCccCCCCCCCceeeEeccccccc
Q 024331 125 GAAGQCF-FTGVPGSFYGRLFPRNSVHLFHSSYSLQW 160 (269)
Q Consensus 125 ~~~~~~f-~~~vpgSFy~~lfP~~Svd~~~Ss~alHW 160 (269)
+-.| +. |++....++ +++|+++|..+.+|
T Consensus 106 ---~v~~~i~---gD~~~~~~~-~~fD~Vvsn~~~~~ 135 (290)
T 2xyq_A 106 ---DADSTLI---GDCATVHTA-NKWDLIISDMYDPR 135 (290)
T ss_dssp ---SSSEEEE---SCGGGCCCS-SCEEEEEECCCCCC
T ss_pred ---CCEEEEE---CccccCCcc-CcccEEEEcCCccc
Confidence 1134 44 777776555 78999999866554
No 188
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.40 E-value=0.00064 Score=58.47 Aligned_cols=36 Identities=17% Similarity=0.212 Sum_probs=28.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
++.+|+|+|||+|..++.++ +. .|..+|+..|+...
T Consensus 71 ~~~~vLDiG~G~G~~~~~la--------~~-------~~~~~v~~vD~~~~ 106 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFA--------SI-------SDDIHVTTIERNET 106 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHH--------TT-------CTTCEEEEEECCHH
T ss_pred CCCEEEEEeCchhHHHHHHH--------Hh-------CCCCEEEEEECCHH
Confidence 35799999999999998777 32 24689999998553
No 189
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.39 E-value=0.00037 Score=60.15 Aligned_cols=35 Identities=9% Similarity=-0.032 Sum_probs=27.8
Q ss_pred eEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 52 ~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
.+|+|+|||+|..|+.++ +.+ +|..+|+..|+...
T Consensus 58 ~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~~ 92 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYIL--------NGL------ADNTTLTCIDPESE 92 (221)
T ss_dssp CEEEEESTTHHHHHHHHH--------HHS------CTTSEEEEECSCHH
T ss_pred CCEEEEcCCchHHHHHHH--------HhC------CCCCEEEEEECCHH
Confidence 499999999999999887 442 24688999998654
No 190
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.37 E-value=0.0035 Score=56.59 Aligned_cols=37 Identities=8% Similarity=0.030 Sum_probs=29.0
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+++.+|+|+|||+|..+..++ +. .+..+|...|+-..
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~V~~VDid~~ 118 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVT--------RH-------KNVESITMVEIDAG 118 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHH--------TC-------TTCCEEEEECSCTT
T ss_pred CCCCEEEEEeCChhHHHHHHH--------hC-------CCCCEEEEEECCHH
Confidence 457899999999999877666 32 24578999999776
No 191
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.36 E-value=0.00059 Score=62.57 Aligned_cols=115 Identities=17% Similarity=0.077 Sum_probs=68.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (269)
...+|+|+|||+|..++.++ ... .|..+|+..|+... +. +.++++. ..++ ..
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a--------~~~------~~~~~v~g~Di~~~----------~i-~~a~~n~~~~g~--~~ 255 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAA--------STL------GPTSPVYAGDLDEK----------RL-GLAREAALASGL--SW 255 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHH--------HHH------CTTSCEEEEESCHH----------HH-HHHHHHHHHTTC--TT
T ss_pred CCCEEEeCCCCcCHHHHHHH--------Hhh------CCCceEEEEECCHH----------HH-HHHHHHHHHcCC--Cc
Confidence 35789999999999888776 332 14578999998654 11 1122111 0111 01
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
-.|.. +++.....|.+++|++++.--.+|- + .... ........+++.=.+-|
T Consensus 256 i~~~~---~D~~~~~~~~~~~D~Ii~npPyg~r-------------~----~~~~--------~~~~~~~~~~~~~~~~L 307 (354)
T 3tma_A 256 IRFLR---ADARHLPRFFPEVDRILANPPHGLR-------------L----GRKE--------GLFHLYWDFLRGALALL 307 (354)
T ss_dssp CEEEE---CCGGGGGGTCCCCSEEEECCCSCC---------------------CH--------HHHHHHHHHHHHHHHTS
T ss_pred eEEEe---CChhhCccccCCCCEEEECCCCcCc-------------c----CCcc--------cHHHHHHHHHHHHHHhc
Confidence 13433 8888888888889999994333220 0 0011 12233455666556778
Q ss_pred ccCCeEEEEec
Q 024331 209 VAEGRMVLTFL 219 (269)
Q Consensus 209 ~pGG~lv~~~~ 219 (269)
+|||++++.+.
T Consensus 308 kpgG~l~i~t~ 318 (354)
T 3tma_A 308 PPGGRVALLTL 318 (354)
T ss_dssp CTTCEEEEEES
T ss_pred CCCcEEEEEeC
Confidence 89999999864
No 192
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.35 E-value=0.00042 Score=60.54 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=29.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
++.+|+|+|||+|..|+.++ +.+ ++..+|+..|+...
T Consensus 60 ~~~~VLDiG~G~G~~t~~la--------~~~------~~~~~v~~iD~~~~ 96 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMS--------LAL------PDDGQVITCDINEG 96 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHH--------HTS------CTTCEEEEEECCCS
T ss_pred CcCEEEEeeCCcCHHHHHHH--------HhC------CCCCEEEEEECCHH
Confidence 35799999999999999877 432 23689999998765
No 193
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=97.35 E-value=0.00058 Score=65.98 Aligned_cols=76 Identities=14% Similarity=0.278 Sum_probs=44.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ +. +..+|+..|+.. . .+.. .+... +.+.. .+
T Consensus 158 ~~~~VLDiGcGtG~la~~la--------~~--------~~~~V~gvD~s~--~---l~~A---~~~~~-~~gl~----~~ 208 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAA--------QA--------GARKIYAVEAST--M---AQHA---EVLVK-SNNLT----DR 208 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHH--------HT--------TCSEEEEEECHH--H---HHHH---HHHHH-HTTCT----TT
T ss_pred CCCEEEEecCcccHHHHHHH--------Hc--------CCCEEEEEEcHH--H---HHHH---HHHHH-HcCCC----Cc
Confidence 35799999999998776554 32 346899999742 1 1111 11111 12211 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYS 157 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~a 157 (269)
+ ..+.+++....+| +++|+++|...
T Consensus 209 v--~~~~~d~~~~~~~-~~fD~Ivs~~~ 233 (480)
T 3b3j_A 209 I--VVIPGKVEEVSLP-EQVDIIISEPM 233 (480)
T ss_dssp E--EEEESCTTTCCCS-SCEEEEECCCC
T ss_pred E--EEEECchhhCccC-CCeEEEEEeCc
Confidence 2 2234777775566 58999999655
No 194
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.35 E-value=0.00087 Score=59.59 Aligned_cols=72 Identities=8% Similarity=-0.058 Sum_probs=44.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..|+.++ +.. +. +|+..|+... .+....+... ..+.. ..+
T Consensus 126 ~~~VLDlgcG~G~~~~~la--------~~~-------~~-~V~~vD~s~~-------~~~~a~~n~~-~n~~~----~~v 177 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIA--------VYG-------KA-KVIAIEKDPY-------TFKFLVENIH-LNKVE----DRM 177 (278)
T ss_dssp TCEEEETTCTTTTTHHHHH--------HHT-------CC-EEEEECCCHH-------HHHHHHHHHH-HTTCT----TTE
T ss_pred CCEEEEecccCCHHHHHHH--------HhC-------CC-EEEEEECCHH-------HHHHHHHHHH-HcCCC----ceE
Confidence 5799999999999999887 442 22 7999998654 0111111111 11211 123
Q ss_pred -EEeecCCCccCCCCCCCceeeEec
Q 024331 131 -FFTGVPGSFYGRLFPRNSVHLFHS 154 (269)
Q Consensus 131 -f~~~vpgSFy~~lfP~~Svd~~~S 154 (269)
|+. +++...+. ++++|++++
T Consensus 178 ~~~~---~D~~~~~~-~~~fD~Vi~ 198 (278)
T 2frn_A 178 SAYN---MDNRDFPG-ENIADRILM 198 (278)
T ss_dssp EEEC---SCTTTCCC-CSCEEEEEE
T ss_pred EEEE---CCHHHhcc-cCCccEEEE
Confidence 444 77777665 789999988
No 195
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.33 E-value=0.0011 Score=53.34 Aligned_cols=75 Identities=17% Similarity=0.216 Sum_probs=46.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ + +..+|+..|.... . +....+... ..+. .+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~--------~---------~~~~v~~vD~~~~-~------~~~a~~~~~-~~~~-----~~ 84 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIA--------K---------RCKFVYAIDYLDG-A------IEVTKQNLA-KFNI-----KN 84 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHH--------T---------TSSEEEEEECSHH-H------HHHHHHHHH-HTTC-----CS
T ss_pred CCCEEEEeCCCCCHHHHHHH--------h---------cCCeEEEEeCCHH-H------HHHHHHHHH-HcCC-----Cc
Confidence 45799999999999888776 2 3578999997553 1 111111111 1111 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYS 157 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~a 157 (269)
+ ..+.+++.. .+|++++|++++...
T Consensus 85 ~--~~~~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 85 C--QIIKGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp E--EEEESCHHH-HGGGCCCSEEEECSC
T ss_pred E--EEEECCccc-cccCCCCcEEEECCc
Confidence 2 223377777 788889999999544
No 196
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.33 E-value=0.00077 Score=61.25 Aligned_cols=129 Identities=15% Similarity=0.022 Sum_probs=69.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..|+.++ +.+ .+..+|+..|+... .+....+.+. +.|. .+
T Consensus 119 g~~VLDlg~G~G~~t~~la--------~~~------~~~~~v~avD~s~~-------~l~~a~~~~~-~~g~-----~~- 170 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLA--------QLM------RNDGVIYAFDVDEN-------RLRETRLNLS-RLGV-----LN- 170 (315)
T ss_dssp TCEEEECCSSCSHHHHHHH--------HHT------TTCSEEEEECSCHH-------HHHHHHHHHH-HHTC-----CS-
T ss_pred CCEEEEeCCCCCHHHHHHH--------HHh------CCCCEEEEEcCCHH-------HHHHHHHHHH-HhCC-----Ce-
Confidence 4699999999999999877 442 13478999997654 1111111111 1121 12
Q ss_pred EEeecCCCccCCCCCCCceeeEecc---ccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 131 FFTGVPGSFYGRLFPRNSVHLFHSS---YSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 131 f~~~vpgSFy~~lfP~~Svd~~~Ss---~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
+..+-+++.....+++++|++++. +.+.-+.+.|.... ..++.. .....+.-..+|+.=.+-
T Consensus 171 -v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~---------~~~~~~-----~~~~~~~q~~~L~~~~~~ 235 (315)
T 1ixk_A 171 -VILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKW---------NRTMDD-----IKFCQGLQMRLLEKGLEV 235 (315)
T ss_dssp -EEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC-----------------CCHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred -EEEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhh---------cCCHHH-----HHHHHHHHHHHHHHHHHh
Confidence 222346666544456789999972 11111112221110 011111 112233445666666677
Q ss_pred hccCCeEEEEecccC
Q 024331 208 LVAEGRMVLTFLGRK 222 (269)
Q Consensus 208 L~pGG~lv~~~~g~~ 222 (269)
|+|||+|++++....
T Consensus 236 LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 236 LKPGGILVYSTCSLE 250 (315)
T ss_dssp EEEEEEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCC
Confidence 889999999886553
No 197
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.32 E-value=0.00065 Score=64.28 Aligned_cols=127 Identities=17% Similarity=0.096 Sum_probs=72.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..|..++ +.. +..+|+.+|....=. ....+.+. +.|. ...
T Consensus 247 g~~VLDlgaG~G~~t~~la--------~~~-------~~~~v~a~D~~~~~l-------~~~~~~~~-~~g~-----~~~ 298 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHIL--------EVA-------PEAQVVAVDIDEQRL-------SRVYDNLK-RLGM-----KAT 298 (429)
T ss_dssp TCEEEEESCTTCHHHHHHH--------HHC-------TTCEEEEEESSTTTH-------HHHHHHHH-HTTC-----CCE
T ss_pred cCeEEEECCCchHHHHHHH--------HHc-------CCCEEEEECCCHHHH-------HHHHHHHH-HcCC-----CeE
Confidence 4699999999999999887 442 347999999877622 11111111 1121 112
Q ss_pred EEeecCCCccCCC--CCCCceeeEec---cccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 024331 131 FFTGVPGSFYGRL--FPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (269)
Q Consensus 131 f~~~vpgSFy~~l--fP~~Svd~~~S---s~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 205 (269)
++ .+++.... ++++++|++++ .+....+.+.|.... .. ++.. . ....+....+|+.=.
T Consensus 299 ~~---~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~--------~~-~~~~-~----~~l~~~q~~~L~~a~ 361 (429)
T 1sqg_A 299 VK---QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKW--------LR-RDRD-I----PELAQLQSEILDAIW 361 (429)
T ss_dssp EE---ECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHH--------HC-CTTH-H----HHHHHHHHHHHHHHG
T ss_pred EE---eCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhh--------cC-CHHH-H----HHHHHHHHHHHHHHH
Confidence 33 36665544 67789999986 223333333332110 00 1111 1 112233345666556
Q ss_pred hhhccCCeEEEEecccC
Q 024331 206 EELVAEGRMVLTFLGRK 222 (269)
Q Consensus 206 ~EL~pGG~lv~~~~g~~ 222 (269)
+-|+|||+|+++++...
T Consensus 362 ~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 362 PHLKTGGTLVYATCSVL 378 (429)
T ss_dssp GGEEEEEEEEEEESCCC
T ss_pred HhcCCCCEEEEEECCCC
Confidence 77889999999987664
No 198
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.32 E-value=0.00023 Score=63.91 Aligned_cols=80 Identities=15% Similarity=0.129 Sum_probs=50.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcC-CCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~ 128 (269)
...+|+|+|||+|..|..++ ++. .+|+..|+... + .+.++++.. .+. ..
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~--------~~~---------~~v~~vD~~~~----------~-~~~a~~~~~~~~~--~~ 77 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLL--------EKA---------KKVVACELDPR----------L-VAELHKRVQGTPV--AS 77 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHH--------HHS---------SEEEEEESCHH----------H-HHHHHHHHTTSTT--GG
T ss_pred CCCEEEEEcCcccHHHHHHH--------hhC---------CEEEEEECCHH----------H-HHHHHHHHHhcCC--CC
Confidence 45799999999999999887 431 47888886543 1 111222211 100 01
Q ss_pred ceEEeecCCCccCCCCCCCceeeEecccccccccc
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ 163 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~ 163 (269)
++ ..+-+++....+| ++|.++++...||.+.
T Consensus 78 ~v--~~~~~D~~~~~~~--~fD~vv~nlpy~~~~~ 108 (285)
T 1zq9_A 78 KL--QVLVGDVLKTDLP--FFDTCVANLPYQISSP 108 (285)
T ss_dssp GE--EEEESCTTTSCCC--CCSEEEEECCGGGHHH
T ss_pred ce--EEEEcceecccch--hhcEEEEecCcccchH
Confidence 21 2233788776566 7999999988888653
No 199
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.29 E-value=0.00034 Score=60.57 Aligned_cols=83 Identities=7% Similarity=-0.080 Sum_probs=46.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ ++. |..+|+..|+... .+........ ..+.. ..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la--------~~~-------~~~~v~gvD~s~~-------~~~~a~~~~~-~~~~~----~~ 117 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLG--------ATL-------NGWYFLATEVDDM-------CFNYAKKNVE-QNNLS----DL 117 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHH--------HHH-------HCCEEEEEESCHH-------HHHHHHHHHH-HTTCT----TT
T ss_pred CCCEEEEeCCChhHHHHHHH--------HhC-------CCCeEEEEECCHH-------HHHHHHHHHH-HcCCC----cc
Confidence 45799999999999988776 433 3478999997654 0111111111 11211 11
Q ss_pred -eEEeecCCCccC---CCCCC---CceeeEeccccccccc
Q 024331 130 -CFFTGVPGSFYG---RLFPR---NSVHLFHSSYSLQWLS 162 (269)
Q Consensus 130 -~f~~~vpgSFy~---~lfP~---~Svd~~~Ss~alHWLS 162 (269)
-++. ++... ..++. +++|+++|+-..|+..
T Consensus 118 v~~~~---~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 118 IKVVK---VPQKTLLMDALKEESEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp EEEEE---CCTTCSSTTTSTTCCSCCBSEEEECCCCC---
T ss_pred EEEEE---cchhhhhhhhhhcccCCcccEEEECCCCccCc
Confidence 2333 44333 24553 6899999986666543
No 200
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.28 E-value=0.00023 Score=65.60 Aligned_cols=81 Identities=14% Similarity=0.114 Sum_probs=49.5
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
+++.+|+|+|||+|..+..++ +++ |.++|...|+-.. ..+..++..+... .+
T Consensus 88 p~~~rVLdIG~G~G~la~~la--------~~~-------p~~~v~~VEidp~-----------vi~~Ar~~~~~~~--~~ 139 (317)
T 3gjy_A 88 ASKLRITHLGGGACTMARYFA--------DVY-------PQSRNTVVELDAE-----------LARLSREWFDIPR--AP 139 (317)
T ss_dssp GGGCEEEEESCGGGHHHHHHH--------HHS-------TTCEEEEEESCHH-----------HHHHHHHHSCCCC--TT
T ss_pred CCCCEEEEEECCcCHHHHHHH--------HHC-------CCcEEEEEECCHH-----------HHHHHHHhccccC--CC
Confidence 456799999999998877666 543 5678888887654 1222233222110 01
Q ss_pred ce-EEeecCCCccCC--CCCCCceeeEeccccccc
Q 024331 129 QC-FFTGVPGSFYGR--LFPRNSVHLFHSSYSLQW 160 (269)
Q Consensus 129 ~~-f~~~vpgSFy~~--lfP~~Svd~~~Ss~alHW 160 (269)
++ ++. ++...- -++++++|+|++....||
T Consensus 140 rv~v~~---~Da~~~l~~~~~~~fDvIi~D~~~~~ 171 (317)
T 3gjy_A 140 RVKIRV---DDARMVAESFTPASRDVIIRDVFAGA 171 (317)
T ss_dssp TEEEEE---SCHHHHHHTCCTTCEEEEEECCSTTS
T ss_pred ceEEEE---CcHHHHHhhccCCCCCEEEECCCCcc
Confidence 22 223 555442 257789999999765555
No 201
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.25 E-value=0.00082 Score=61.12 Aligned_cols=20 Identities=25% Similarity=0.521 Sum_probs=17.4
Q ss_pred CceEEEeecCCCCcccHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVA 69 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~ 69 (269)
...+|+|+|||+|..|..++
T Consensus 82 ~g~~VLDlGcG~G~~s~~la 101 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCG 101 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHH
Confidence 35799999999999988777
No 202
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.17 E-value=0.00057 Score=60.85 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=25.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
...+|+|+|||+|..++.++ +. ...+|+..|+++.
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a--------~~--------~~~~v~~~D~s~~ 113 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAF--------LA--------GADQVVATDYPDP 113 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHH--------HT--------TCSEEEEEECSCH
T ss_pred CCCeEEEecccccHHHHHHH--------Hc--------CCCEEEEEeCCCH
Confidence 34699999999999887665 32 1248999998543
No 203
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.16 E-value=0.00067 Score=61.59 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=27.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
...+|+|+|||+|..++.++ +.. .|..+|+..|+..
T Consensus 105 ~g~~VLDiG~G~G~~~~~la--------~~~------g~~~~v~~vD~~~ 140 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLS--------KAV------GSQGRVISFEVRK 140 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------CTTCEEEEEESSH
T ss_pred CCCEEEEeCCCcCHHHHHHH--------HHh------CCCceEEEEeCCH
Confidence 35799999999999998877 432 1457888888744
No 204
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.15 E-value=0.00054 Score=57.89 Aligned_cols=37 Identities=11% Similarity=0.151 Sum_probs=28.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
++.+|+|+|||+|..|+.++ +.+ ++..+|+..|....
T Consensus 64 ~~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~~ 100 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMG--------LAL------PKDGTLITCDVDEK 100 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHH--------TTC------CTTCEEEEEESCHH
T ss_pred CCCEEEEeCCcchHHHHHHH--------HhC------CCCCEEEEEeCCHH
Confidence 35699999999999998777 332 23689999997653
No 205
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.15 E-value=0.00057 Score=59.45 Aligned_cols=39 Identities=18% Similarity=0.119 Sum_probs=28.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+.+|+|+|||+|..|+.++ +.++.. .|..+|+..|+...
T Consensus 82 ~~~VLDiG~GtG~~t~~la--------~~~~~~---~~~~~V~gvD~s~~ 120 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFR--------DLTKIM---GIDCQVIGIDRDLS 120 (236)
T ss_dssp CSEEEEECCTTSHHHHHHH--------HHHHHT---TCCCEEEEEESCCT
T ss_pred CCEEEEEeCCCCHHHHHHH--------Hhhhhc---CCCCEEEEEeCChH
Confidence 4699999999999999777 321111 15688999998765
No 206
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.14 E-value=0.002 Score=55.35 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=26.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
+.+|+|+|||+|..++.++ +.. ++..+|+..|...
T Consensus 61 ~~~VLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~ 95 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFA--------SAL------PEDGKILCCDVSE 95 (239)
T ss_dssp CSEEEEECCTTCHHHHHHH--------HHS------CTTCEEEEEESCH
T ss_pred cCEEEEEeCCCCHHHHHHH--------HhC------CCCCEEEEEECCH
Confidence 5799999999999998877 442 1246888888654
No 207
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.13 E-value=0.0014 Score=59.31 Aligned_cols=142 Identities=13% Similarity=0.123 Sum_probs=81.7
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAG 128 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~ 128 (269)
+.+-+|+|+|||.|+.|+.++ . ..|..+++..|.-.. +-.+....-...|. +
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~--------~-------~~p~a~y~a~DId~~--------~le~a~~~l~~~g~-----~ 182 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWM--------G-------LPAETVYIASDIDAR--------LVGFVDEALTRLNV-----P 182 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTT--------T-------CCTTCEEEEEESBHH--------HHHHHHHHHHHTTC-----C
T ss_pred CCCceeeeeccCccHHHHHHH--------h-------hCCCCEEEEEeCCHH--------HHHHHHHHHHhcCC-----C
Confidence 457899999999999999777 2 347899999997654 11111111112222 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
..+.. .++-... |....|++.++-++|-|.+-... . .| ++ -+.|
T Consensus 183 ~~~~v---~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg------~-------------g~---------~l----l~aL 226 (281)
T 3lcv_B 183 HRTNV---ADLLEDR-LDEPADVTLLLKTLPCLETQQRG------S-------------GW---------EV----IDIV 226 (281)
T ss_dssp EEEEE---CCTTTSC-CCSCCSEEEETTCHHHHHHHSTT------H-------------HH---------HH----HHHS
T ss_pred ceEEE---eeecccC-CCCCcchHHHHHHHHHhhhhhhH------H-------------HH---------HH----HHHh
Confidence 12222 5655555 77789999999999998663321 1 11 12 2356
Q ss_pred ccCCeEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHH-ccCcccccccceeccc
Q 024331 209 VAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVS-EVTKSFLLLIVFNQLN 263 (269)
Q Consensus 209 ~pGG~lv~~~~g~~~~~~~~~~~~~~~~~l~~~l~~mv~-eG~i~~~~~d~FnlP~ 263 (269)
+||| +++++.-+.=.++.- .|.+.-.+.|...+. .|. .++.+.++.
T Consensus 227 ~~~~-vvVSfp~ksl~Grs~----gm~~~Y~~~~e~~~~~~g~----~~~~~~~~n 273 (281)
T 3lcv_B 227 NSPN-IVVTFPTKSLGQRSK----GMFQNYSQSFESQARERSC----RIQRLEIGN 273 (281)
T ss_dssp SCSE-EEEEEECC-----------CHHHHHHHHHHHHHHHHTC----CEEEEEETT
T ss_pred CCCC-EEEeccchhhcCCCc----chhhHHHHHHHHHHHhcCC----ceeeeeecC
Confidence 6765 567777654333332 134555666777555 554 445555553
No 208
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.12 E-value=0.002 Score=62.29 Aligned_cols=130 Identities=11% Similarity=0.042 Sum_probs=71.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..|+.++ ++. .+..+|+.+|+...= +....+.++ +.|. .+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA--------~~~------~~~g~V~avDis~~~-------l~~~~~n~~-r~g~-----~n 169 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQIS--------ARM------NNEGAILANEFSASR-------VKVLHANIS-RCGI-----SN 169 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHH--------HHT------TTCSEEEEECSSHHH-------HHHHHHHHH-HHTC-----CS
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HhC------CCCCEEEEEECCHHH-------HHHHHHHHH-HcCC-----Cc
Confidence 35799999999999999887 442 134789999986541 111111111 1221 12
Q ss_pred eEEeecCCCccCCCC-CCCceeeEec---cccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 024331 130 CFFTGVPGSFYGRLF-PRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (269)
Q Consensus 130 ~f~~~vpgSFy~~lf-P~~Svd~~~S---s~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 205 (269)
+- .+-++...... +++++|.|++ .+...-+.+.|.... ..++.. .+. ..+.-..+|+.=.
T Consensus 170 v~--~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~---------~~~~~~-~~~----l~~~q~~iL~~a~ 233 (479)
T 2frx_A 170 VA--LTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALK---------NWSPES-NQE----IAATQRELIDSAF 233 (479)
T ss_dssp EE--EECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSS---------SCCHHH-HHH----HHHHHHHHHHHHH
T ss_pred EE--EEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHh---------hcCHhH-HHH----HHHHHHHHHHHHH
Confidence 21 22355544322 4678999997 233333344443221 111111 111 2222344555555
Q ss_pred hhhccCCeEEEEecccC
Q 024331 206 EELVAEGRMVLTFLGRK 222 (269)
Q Consensus 206 ~EL~pGG~lv~~~~g~~ 222 (269)
+-|||||+|+++++...
T Consensus 234 ~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 234 HALRPGGTLVYSTCTLN 250 (479)
T ss_dssp HHEEEEEEEEEEESCCS
T ss_pred HhcCCCCEEEEecccCC
Confidence 67889999999987664
No 209
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.08 E-value=0.0004 Score=61.63 Aligned_cols=128 Identities=9% Similarity=-0.008 Sum_probs=66.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..|+.++ +.. ....+|+..|+... .+....+.+. +.|. .++
T Consensus 84 g~~VLDlgaG~G~~t~~la--------~~~------~~~~~v~avD~~~~-------~l~~~~~~~~-~~g~-----~~v 136 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLA--------QLM------KNKGTIVAVEISKT-------RTKALKSNIN-RMGV-----LNT 136 (274)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HHT------TTCSEEEEEESCHH-------HHHHHHHHHH-HTTC-----CSE
T ss_pred cCEEEEeCCCccHHHHHHH--------HHc------CCCCEEEEECCCHH-------HHHHHHHHHH-HhCC-----CcE
Confidence 4699999999999998877 432 12378999998654 0111111111 1121 122
Q ss_pred EEeecCCCccCCCC----CCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhh
Q 024331 131 FFTGVPGSFYGRLF----PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSE 206 (269)
Q Consensus 131 f~~~vpgSFy~~lf----P~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 206 (269)
- .+-+++..... +.+++|++++. .|+.-. |.+. +. +.....-.....++...+|+.=.+
T Consensus 137 ~--~~~~D~~~~~~~~~~~~~~fD~Vl~d--------~Pcs~~---g~~~--~~--p~~~~~~~~~~~~~~~~~l~~~~~ 199 (274)
T 3ajd_A 137 I--IINADMRKYKDYLLKNEIFFDKILLD--------APCSGN---IIKD--KN--RNVSEEDIKYCSLRQKELIDIGID 199 (274)
T ss_dssp E--EEESCHHHHHHHHHHTTCCEEEEEEE--------ECCC-------------------HHHHTGGGTCHHHHHHHHHH
T ss_pred E--EEeCChHhcchhhhhccccCCEEEEc--------CCCCCC---cccc--cC--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 22356655433 36789999873 232111 1100 00 000000011112334556665567
Q ss_pred hhccCCeEEEEecccC
Q 024331 207 ELVAEGRMVLTFLGRK 222 (269)
Q Consensus 207 EL~pGG~lv~~~~g~~ 222 (269)
-|+|||+|++++....
T Consensus 200 ~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 200 LLKKDGELVYSTCSME 215 (274)
T ss_dssp HEEEEEEEEEEESCCC
T ss_pred hCCCCCEEEEEECCCC
Confidence 7889999999987664
No 210
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.03 E-value=0.0021 Score=54.75 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=43.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..++.++ ++ ..+|+..|.... . +....+... ..+.. .+
T Consensus 91 ~~~~vldiG~G~G~~~~~l~--------~~---------~~~v~~vD~~~~-~------~~~a~~~~~-~~~~~----~~ 141 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLS--------EV---------AGEVWTFEAVEE-F------YKTAQKNLK-KFNLG----KN 141 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HH---------SSEEEEECSCHH-H------HHHHHHHHH-HTTCC----TT
T ss_pred CCCEEEEeCCCccHHHHHHH--------Hh---------CCEEEEEecCHH-H------HHHHHHHHH-HcCCC----Cc
Confidence 35799999999999888776 32 257888887543 1 111111111 11210 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEec
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHS 154 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~S 154 (269)
+ ..+.+++....++++++|++++
T Consensus 142 ~--~~~~~d~~~~~~~~~~~D~v~~ 164 (248)
T 2yvl_A 142 V--KFFNVDFKDAEVPEGIFHAAFV 164 (248)
T ss_dssp E--EEECSCTTTSCCCTTCBSEEEE
T ss_pred E--EEEEcChhhcccCCCcccEEEE
Confidence 1 2234777765547889999997
No 211
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.00 E-value=0.0016 Score=59.84 Aligned_cols=118 Identities=13% Similarity=0.097 Sum_probs=66.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ +. ..+|+..|+... .+....+... ..+... .+-
T Consensus 153 ~~~~VLDlgcGtG~~sl~la--------~~---------ga~V~~VD~s~~-------al~~a~~n~~-~~gl~~--~~v 205 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAA--------AA---------GAEVTHVDASKK-------AIGWAKENQV-LAGLEQ--API 205 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHH--------HT---------TCEEEEECSCHH-------HHHHHHHHHH-HHTCTT--SCE
T ss_pred CCCcEEEcccccCHHHHHHH--------Hc---------CCEEEEEECCHH-------HHHHHHHHHH-HcCCCc--cce
Confidence 35799999999999998777 32 138999997654 0111111111 112100 001
Q ss_pred eEEeecCCCccCCCC----CCCceeeEeccccccccccCCCCCCC-CCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 024331 130 CFFTGVPGSFYGRLF----PRNSVHLFHSSYSLQWLSQVPDGLES-NKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (269)
Q Consensus 130 ~f~~~vpgSFy~~lf----P~~Svd~~~Ss~alHWLS~~P~~l~~-nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 204 (269)
.|+ -++....+. ..+++|++++. |+.+.. .++.++ ...+|...+|+.=
T Consensus 206 ~~i---~~D~~~~l~~~~~~~~~fD~Ii~d---------PP~~~~~~~~~~~---------------~~~~~~~~ll~~~ 258 (332)
T 2igt_A 206 RWI---CEDAMKFIQREERRGSTYDIILTD---------PPKFGRGTHGEVW---------------QLFDHLPLMLDIC 258 (332)
T ss_dssp EEE---CSCHHHHHHHHHHHTCCBSEEEEC---------CCSEEECTTCCEE---------------EHHHHHHHHHHHH
T ss_pred EEE---ECcHHHHHHHHHhcCCCceEEEEC---------CccccCCchHHHH---------------HHHHHHHHHHHHH
Confidence 233 366655332 15789999982 221110 011122 1345667777777
Q ss_pred hhhhccCCeEEEEeccc
Q 024331 205 SEELVAEGRMVLTFLGR 221 (269)
Q Consensus 205 a~EL~pGG~lv~~~~g~ 221 (269)
.+-|+|||++++.....
T Consensus 259 ~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 259 REILSPKALGLVLTAYS 275 (332)
T ss_dssp HHTBCTTCCEEEEEECC
T ss_pred HHhcCcCcEEEEEECCC
Confidence 78899999988877543
No 212
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.00 E-value=0.0017 Score=61.94 Aligned_cols=129 Identities=10% Similarity=0.088 Sum_probs=68.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..|+.++ +.. ....+|+.+|.... .+....+.+. +.|. .++
T Consensus 260 g~~VLDlgaG~G~~t~~la--------~~~------~~~~~v~a~D~s~~-------~l~~~~~~~~-~~g~-----~~v 312 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLA--------ELM------KNKGKIYAFDVDKM-------RMKRLKDFVK-RMGI-----KIV 312 (450)
T ss_dssp TCEEEESSCTTCHHHHHHH--------HHT------TTCSEEEEECSCHH-------HHHHHHHHHH-HTTC-----CSE
T ss_pred cCEEEEeCCCccHHHHHHH--------HHc------CCCCEEEEEcCCHH-------HHHHHHHHHH-HcCC-----CcE
Confidence 4699999999999999877 442 12378999998764 1111111111 1121 122
Q ss_pred EEeecCCCccCCC--CCCCceeeEec---cccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 024331 131 FFTGVPGSFYGRL--FPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (269)
Q Consensus 131 f~~~vpgSFy~~l--fP~~Svd~~~S---s~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 205 (269)
..+.+++.... ++++++|++++ .+.+.-+.+.|... |.. ++.. .+.+ .+.-..+|+.=.
T Consensus 313 --~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~-------~~~--~~~~-~~~l----~~~q~~iL~~a~ 376 (450)
T 2yxl_A 313 --KPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELR-------WRL--REDK-INEM----SQLQRELLESAA 376 (450)
T ss_dssp --EEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHH-------HHC--CTTS-HHHH----HHHHHHHHHHHH
T ss_pred --EEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhh-------hhC--CHHH-HHHH----HHHHHHHHHHHH
Confidence 22335665543 67789999996 12222222333210 000 0100 0111 111134455445
Q ss_pred hhhccCCeEEEEecccC
Q 024331 206 EELVAEGRMVLTFLGRK 222 (269)
Q Consensus 206 ~EL~pGG~lv~~~~g~~ 222 (269)
+-|+|||+|+++++...
T Consensus 377 ~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 377 RLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp TTEEEEEEEEEEESCCC
T ss_pred HhcCCCcEEEEEeCCCC
Confidence 66789999999987654
No 213
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.99 E-value=0.0029 Score=56.66 Aligned_cols=34 Identities=32% Similarity=0.471 Sum_probs=27.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
..+|+|+|||+|..++.++ +. |..+|+..|+...
T Consensus 124 ~~~vLDlG~GsG~~~~~la--------~~--------~~~~v~~vDis~~ 157 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVA--------KF--------SDAIVFATDVSSK 157 (284)
T ss_dssp CCEEEEESCTTSHHHHHHH--------HH--------SSCEEEEEESCHH
T ss_pred CCEEEEEeCchhHHHHHHH--------HC--------CCCEEEEEECCHH
Confidence 4689999999999988776 32 4589999997654
No 214
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=96.96 E-value=0.0012 Score=58.12 Aligned_cols=77 Identities=4% Similarity=-0.007 Sum_probs=48.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (269)
+.-+|+|+|||||.-++.++ +. .|..+|+..|+-.. ++ +.++++. ..++ ..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la--------~~-------~~~~~V~AvDi~~~----------al-~~A~~N~~~~gl--~~ 72 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLL--------QM-------GYCDFAIAGEVVNG----------PY-QSALKNVSEHGL--TS 72 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHH--------HT-------TCEEEEEEEESSHH----------HH-HHHHHHHHHTTC--TT
T ss_pred CCCEEEEECCchHHHHHHHH--------Hh-------CCCCEEEEEECCHH----------HH-HHHHHHHHHcCC--CC
Confidence 45899999999999999887 43 25678999998765 22 1122211 1111 01
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccc
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSY 156 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~ 156 (269)
. +..+.|+....+.|.+.+|+++..-
T Consensus 73 ~--I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 73 K--IDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp T--EEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred c--EEEEECchhhccccccccCEEEEeC
Confidence 1 2234478788777777899887543
No 215
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=96.96 E-value=0.00027 Score=64.30 Aligned_cols=85 Identities=11% Similarity=0.078 Sum_probs=47.4
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHH-hcCCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK-QLGSASGAA 127 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~-~~~~~~~~~ 127 (269)
+++.+|+|+|||+|..+..++ ++ .|..+|+..|+... .-.+.+ +.+.. ..+ .+. .
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~-~i~~ar------~~~~~~~~~-~~~-~ 131 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVL--------KH-------PTVEKAVMVDIDGE-LVEVAK------RHMPEWHQG-AFD-D 131 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHT--------TS-------TTCCEEEEEESCHH-HHHHHH------HHCHHHHTT-GGG-C
T ss_pred CCCCeEEEEcCCcCHHHHHHH--------hc-------CCCCEEEEEECCHH-HHHHHH------HHhHhhccc-ccc-C
Confidence 356899999999999887665 32 24568899987653 111111 10111 001 000 0
Q ss_pred Cc-eEEeecCCCccCC-CCCCCceeeEeccccccc
Q 024331 128 GQ-CFFTGVPGSFYGR-LFPRNSVHLFHSSYSLQW 160 (269)
Q Consensus 128 ~~-~f~~~vpgSFy~~-lfP~~Svd~~~Ss~alHW 160 (269)
++ -++. ++...- ..+++++|++++....||
T Consensus 132 ~~v~~~~---~D~~~~l~~~~~~fD~Ii~d~~~~~ 163 (314)
T 1uir_A 132 PRAVLVI---DDARAYLERTEERYDVVIIDLTDPV 163 (314)
T ss_dssp TTEEEEE---SCHHHHHHHCCCCEEEEEEECCCCB
T ss_pred CceEEEE---chHHHHHHhcCCCccEEEECCCCcc
Confidence 12 2222 554432 235789999999877776
No 216
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.92 E-value=0.0018 Score=54.83 Aligned_cols=37 Identities=19% Similarity=0.173 Sum_probs=28.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
++.+|+|+|||+|..++.++ +.. ++..+|+..|+...
T Consensus 69 ~~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~~ 105 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALA--------LAL------PADGRVVTCEVDAQ 105 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHH--------TTS------CTTCEEEEEESCSH
T ss_pred CCCEEEEEcCCccHHHHHHH--------HhC------CCCCEEEEEECCHH
Confidence 35799999999999988777 321 23578999998654
No 217
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=96.89 E-value=0.0015 Score=58.03 Aligned_cols=131 Identities=11% Similarity=0.079 Sum_probs=73.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~ 128 (269)
+.-+|+|+|||+|.-++.++ +. .|..+|+..|+-.. .+ +.++++. ..++ ..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la--------~~-------~~~~~V~avDi~~~----------al-~~A~~N~~~~gl--~~ 72 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAV--------KN-------QTASFAIAGEVVDG----------PF-QSAQKQVRSSGL--TE 72 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHH--------HT-------TSEEEEEEEESSHH----------HH-HHHHHHHHHTTC--TT
T ss_pred CCCEEEEECCccHHHHHHHH--------Hh-------CCCCEEEEEECCHH----------HH-HHHHHHHHHcCC--Cc
Confidence 45799999999999999887 43 25678999998665 22 1122211 1111 01
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccc-----cccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhh
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSY-----SLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~-----alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 203 (269)
. +..+.|+.+..+.|..++|++++.- -.+-|.+.+..+.+ .+.+.++.-... ..++++|..
T Consensus 73 ~--I~v~~gD~l~~~~~~~~~D~IviagmGg~lI~~IL~~~~~~L~~-~~~lIlq~~~~~-----------~~lr~~L~~ 138 (244)
T 3gnl_A 73 Q--IDVRKGNGLAVIEKKDAIDTIVIAGMGGTLIRTILEEGAAKLAG-VTKLILQPNIAA-----------WQLREWSEQ 138 (244)
T ss_dssp T--EEEEECSGGGGCCGGGCCCEEEEEEECHHHHHHHHHHTGGGGTT-CCEEEEEESSCH-----------HHHHHHHHH
T ss_pred e--EEEEecchhhccCccccccEEEEeCCchHHHHHHHHHHHHHhCC-CCEEEEEcCCCh-----------HHHHHHHHH
Confidence 1 2223477788777766799988753 23345555555432 234444433332 233334443
Q ss_pred h------hhhhccCCeEEEEecccC
Q 024331 204 R------SEELVAEGRMVLTFLGRK 222 (269)
Q Consensus 204 R------a~EL~pGG~lv~~~~g~~ 222 (269)
. -..++-+|..+-.+....
T Consensus 139 ~Gf~i~~E~lv~e~~k~Yeii~~~~ 163 (244)
T 3gnl_A 139 NNWLITSEAILREDNKVYEIMVLAP 163 (244)
T ss_dssp HTEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEe
Confidence 3 233456887776665443
No 218
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.87 E-value=0.002 Score=62.19 Aligned_cols=129 Identities=12% Similarity=0.041 Sum_probs=71.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..|+.++ ++. .+..+|+.+|+...= +....+.+. +.| . .
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA--------~~~------~~~g~V~AvDis~~~-------l~~a~~n~~-r~G--~----~ 152 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLA--------ARM------GGKGLLLANEVDGKR-------VRGLLENVE-RWG--A----P 152 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHH--------HHT------TTCSEEEEECSCHHH-------HHHHHHHHH-HHC--C----C
T ss_pred CCCEEEEEcCCcCHHHHHHH--------HhC------CCCCEEEEEECCHHH-------HHHHHHHHH-HcC--C----e
Confidence 35799999999999999888 543 134689999976541 111111111 122 1 1
Q ss_pred eEEeecCCCccCCC-CCCCceeeEec---cccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 024331 130 CFFTGVPGSFYGRL-FPRNSVHLFHS---SYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (269)
Q Consensus 130 ~f~~~vpgSFy~~l-fP~~Svd~~~S---s~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 205 (269)
+..+-++..... +.++++|.|++ .+..--+.+.|.... ..++..+ +. ..+.-..+|+.=.
T Consensus 153 --v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~---------~~~~~~~-~~----l~~~Q~~iL~~a~ 216 (464)
T 3m6w_A 153 --LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAAR---------HWGPSAP-KR----MAEVQKALLAQAS 216 (464)
T ss_dssp --CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGG---------GCCTTHH-HH----HHHHHHHHHHHHH
T ss_pred --EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhh---------hcCHHHH-HH----HHHHHHHHHHHHH
Confidence 222335654433 34689999985 112222223332211 1112111 12 2233356666666
Q ss_pred hhhccCCeEEEEecccC
Q 024331 206 EELVAEGRMVLTFLGRK 222 (269)
Q Consensus 206 ~EL~pGG~lv~~~~g~~ 222 (269)
+-|+|||+|+.+++...
T Consensus 217 ~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 217 RLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp TTEEEEEEEEEEESCCC
T ss_pred HhcCCCcEEEEEeccCc
Confidence 77889999999987654
No 219
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.86 E-value=0.0028 Score=58.93 Aligned_cols=115 Identities=16% Similarity=0.065 Sum_probs=69.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ +. ..+|+..|+... .+........ ..+ . .+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la--------~~---------~~~v~~vD~s~~-------~~~~a~~n~~-~n~--~---~~ 258 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLA--------LG---------FREVVAVDSSAE-------ALRRAEENAR-LNG--L---GN 258 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHH--------HH---------EEEEEEEESCHH-------HHHHHHHHHH-HTT--C---TT
T ss_pred CCCeEEEeeeccCHHHHHHH--------Hh---------CCEEEEEECCHH-------HHHHHHHHHH-HcC--C---CC
Confidence 45799999999999998877 32 257888886543 0111111111 112 1 12
Q ss_pred -eEEeecCCCccCCCC----CCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 024331 130 -CFFTGVPGSFYGRLF----PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (269)
Q Consensus 130 -~f~~~vpgSFy~~lf----P~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 204 (269)
.|+. ++....+. +..++|++++ + |+.+..++ .. .....+++..+++.=
T Consensus 259 ~~~~~---~d~~~~~~~~~~~~~~fD~Ii~--------d-pP~~~~~~----------~~-----~~~~~~~~~~~l~~~ 311 (382)
T 1wxx_A 259 VRVLE---ANAFDLLRRLEKEGERFDLVVL--------D-PPAFAKGK----------KD-----VERAYRAYKEVNLRA 311 (382)
T ss_dssp EEEEE---SCHHHHHHHHHHTTCCEEEEEE--------C-CCCSCCST----------TS-----HHHHHHHHHHHHHHH
T ss_pred ceEEE---CCHHHHHHHHHhcCCCeeEEEE--------C-CCCCCCCh----------hH-----HHHHHHHHHHHHHHH
Confidence 2333 66655322 1678999996 2 32222111 11 123557888888888
Q ss_pred hhhhccCCeEEEEeccc
Q 024331 205 SEELVAEGRMVLTFLGR 221 (269)
Q Consensus 205 a~EL~pGG~lv~~~~g~ 221 (269)
.+-|+|||.++++....
T Consensus 312 ~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 312 IKLLKEGGILATASCSH 328 (382)
T ss_dssp HHTEEEEEEEEEEECCT
T ss_pred HHhcCCCCEEEEEECCC
Confidence 89999999999987544
No 220
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.85 E-value=0.0017 Score=57.66 Aligned_cols=35 Identities=17% Similarity=0.100 Sum_probs=27.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
+.-+|+|+|||+|..|+.++ ++. +..+|+..|+..
T Consensus 119 ~~~~VLDlgcG~G~~s~~la--------~~~-------~~~~V~~vD~s~ 153 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLA--------KYS-------KPKLVYAIEKNP 153 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHH--------HHT-------CCSEEEEEECCH
T ss_pred CCCEEEEecCcCCHHHHHHH--------HhC-------CCCEEEEEeCCH
Confidence 45799999999999999887 542 346899999754
No 221
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=96.84 E-value=0.00079 Score=62.08 Aligned_cols=37 Identities=16% Similarity=0.109 Sum_probs=28.3
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+++.+|+|+|||+|..+..++ ++ .|..+|+..|+...
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la--------~~-------~~~~~V~~VDis~~ 155 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVA--------RH-------ASIEQIDMCEIDKM 155 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHT--------TC-------TTCCEEEEEESCHH
T ss_pred CCCCEEEEECCCccHHHHHHH--------Hc-------CCCCEEEEEECCHH
Confidence 456899999999999887666 32 25678999997654
No 222
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.83 E-value=0.0026 Score=56.64 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=27.2
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+++.+|+|+|||+|..+..++ ++ .+..+|...|+-..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vEid~~ 110 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREIL--------KH-------PSVKKATLVDIDGK 110 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHT--------TC-------TTCSEEEEEESCHH
T ss_pred CCCCEEEEECCchHHHHHHHH--------hC-------CCCceEEEEECCHH
Confidence 457899999999998877655 22 24568888887553
No 223
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.81 E-value=0.0017 Score=55.78 Aligned_cols=35 Identities=20% Similarity=0.215 Sum_probs=26.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
+.+|+|+|||+|..++.++ +.+ ++..+|+..|...
T Consensus 73 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~iD~~~ 107 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMA--------LQL------PPDGQIIACDQDP 107 (232)
T ss_dssp CCEEEEECCTTSHHHHHHH--------TTS------CTTCEEEEEESCH
T ss_pred CCEEEEecCCCCHHHHHHH--------HhC------CCCCEEEEEECCH
Confidence 5699999999999998877 332 1357899998754
No 224
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=96.79 E-value=0.0043 Score=53.61 Aligned_cols=36 Identities=17% Similarity=0.121 Sum_probs=28.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
++.+|+|+|||+|..++.++ +.. ++..+|+..|...
T Consensus 70 ~~~~VLeiG~G~G~~~~~la--------~~~------~~~~~v~~iD~~~ 105 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTA--------LSI------PDDGKITAIDFDR 105 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHH--------HHS------CTTCEEEEEESCH
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HhC------CCCCEEEEEECCH
Confidence 46799999999999999887 442 2357899998754
No 225
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.78 E-value=0.0046 Score=53.98 Aligned_cols=37 Identities=14% Similarity=0.156 Sum_probs=29.1
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
++.+|+|+|||+|..++.++ +.. ++..+|+..|....
T Consensus 79 ~~~~VLeiG~G~G~~~~~la--------~~~------~~~~~v~~iD~s~~ 115 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATA--------LAI------PEDGKILAMDINKE 115 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHH--------HHS------CTTCEEEEEESCCH
T ss_pred CcCEEEEeCCCcCHHHHHHH--------HhC------CCCCEEEEEECCHH
Confidence 45799999999999999877 442 23579999998664
No 226
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=96.70 E-value=0.0029 Score=57.79 Aligned_cols=36 Identities=14% Similarity=0.002 Sum_probs=27.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
++.+|+|+|||+|..+..++ ++ .|..+|...|+...
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~ 143 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVL--------KH-------ESVEKVTMCEIDEM 143 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHT--------TC-------TTCCEEEEECSCHH
T ss_pred CCCEEEEEcCCcCHHHHHHH--------Hc-------CCCCEEEEEECCHH
Confidence 46799999999999887665 32 25678999997653
No 227
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.69 E-value=0.0038 Score=55.77 Aligned_cols=37 Identities=8% Similarity=0.018 Sum_probs=27.5
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+++.+|+|+|||+|..+..++ +. .|..+|...|+-..
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~ 113 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELC--------KY-------KSVENIDICEIDET 113 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHT--------TC-------TTCCEEEEEESCHH
T ss_pred CCCCeEEEEeCCcCHHHHHHH--------Hc-------CCCCEEEEEECCHH
Confidence 456899999999998877665 22 24578888887553
No 228
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.68 E-value=0.00071 Score=56.82 Aligned_cols=36 Identities=14% Similarity=0.015 Sum_probs=27.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
++.+|+|+|||+|..++.++ +.. ++..+|+..|...
T Consensus 56 ~~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~ 91 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFA--------RAI------SISSRVVMIDPDR 91 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHH--------TTS------CTTCEEEEEESCH
T ss_pred CCCEEEEEcCCccHHHHHHH--------HhC------CCCCEEEEEECCH
Confidence 35799999999999998777 332 1257899999754
No 229
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=96.66 E-value=0.0057 Score=57.57 Aligned_cols=113 Identities=17% Similarity=0.112 Sum_probs=66.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..|+.++ +. ...|+..|+... .+....+.+. ..+. ..-
T Consensus 215 g~~VLDlg~GtG~~sl~~a--------~~---------ga~V~avDis~~-------al~~a~~n~~-~ng~-----~~~ 264 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAA--------RK---------GAYALAVDKDLE-------ALGVLDQAAL-RLGL-----RVD 264 (393)
T ss_dssp TCEEEEESCTTTHHHHHHH--------HT---------TCEEEEEESCHH-------HHHHHHHHHH-HHTC-----CCE
T ss_pred CCeEEEcccchhHHHHHHH--------Hc---------CCeEEEEECCHH-------HHHHHHHHHH-HhCC-----CCc
Confidence 5799999999999999877 32 134999998764 0111111111 1121 112
Q ss_pred EEeecCCCccCCC--CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 024331 131 FFTGVPGSFYGRL--FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEEL 208 (269)
Q Consensus 131 f~~~vpgSFy~~l--fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL 208 (269)
+.. ++....+ ++.. +|++++. |+.+.. + ... .....+++..+++.=.+-|
T Consensus 265 ~~~---~D~~~~l~~~~~~-fD~Ii~d---------pP~f~~---------~-~~~-----~~~~~~~~~~ll~~a~~~L 316 (393)
T 4dmg_A 265 IRH---GEALPTLRGLEGP-FHHVLLD---------PPTLVK---------R-PEE-----LPAMKRHLVDLVREALRLL 316 (393)
T ss_dssp EEE---SCHHHHHHTCCCC-EEEEEEC---------CCCCCS---------S-GGG-----HHHHHHHHHHHHHHHHHTE
T ss_pred EEE---ccHHHHHHHhcCC-CCEEEEC---------CCcCCC---------C-HHH-----HHHHHHHHHHHHHHHHHhc
Confidence 333 5554421 2344 9999872 333331 1 111 2235678888888888899
Q ss_pred ccCCeEEEEeccc
Q 024331 209 VAEGRMVLTFLGR 221 (269)
Q Consensus 209 ~pGG~lv~~~~g~ 221 (269)
+|||.|+++....
T Consensus 317 kpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 317 AEEGFLWLSSCSY 329 (393)
T ss_dssp EEEEEEEEEECCT
T ss_pred CCCCEEEEEECCC
Confidence 9999999766544
No 230
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=96.61 E-value=0.003 Score=55.27 Aligned_cols=36 Identities=6% Similarity=0.009 Sum_probs=29.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+..+|+|+|||||.-++.++ +. .|..+|+..|.-..
T Consensus 15 ~g~~VlDIGtGsG~l~i~la--------~~-------~~~~~V~avDi~~~ 50 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELV--------ER-------GQIKSAIAGEVVEG 50 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHH--------HT-------TSEEEEEEEESSHH
T ss_pred CCCEEEEeCCCcHHHHHHHH--------Hh-------CCCCEEEEEECCHH
Confidence 45799999999999999887 43 26678999998665
No 231
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.60 E-value=0.0054 Score=50.84 Aligned_cols=75 Identities=9% Similarity=0.079 Sum_probs=45.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.+. +. +.-+|+..|+... +. +..+++.. + -
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~--------~~--------~~~~v~~vD~~~~----------~~-~~a~~~~~-~-----~ 97 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSY--------LL--------GAESVTAFDIDPD----------AI-ETAKRNCG-G-----V 97 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHH--------HT--------TBSEEEEEESCHH----------HH-HHHHHHCT-T-----S
T ss_pred CCCEEEEEeCCccHHHHHHH--------Hc--------CCCEEEEEECCHH----------HH-HHHHHhcC-C-----C
Confidence 45799999999999887665 32 2247899987543 21 22222211 1 1
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccccccccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ 163 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~ 163 (269)
-++. +++.. +| +++|+++++-.+||+++
T Consensus 98 ~~~~---~d~~~--~~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 98 NFMV---ADVSE--IS-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp EEEE---CCGGG--CC-CCEEEEEECCCC-----
T ss_pred EEEE---CcHHH--CC-CCeeEEEECCCchhccC
Confidence 3433 66666 34 79999999999998643
No 232
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.55 E-value=0.0029 Score=57.82 Aligned_cols=37 Identities=8% Similarity=0.018 Sum_probs=27.8
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+++.+|+|+|||+|..+..++ ++ .|..+|+..|+...
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDis~~ 151 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELC--------KY-------KSVENIDICEIDET 151 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHT--------TC-------TTCCEEEEEESCHH
T ss_pred CCCCEEEEEcCCccHHHHHHH--------Hc-------CCCCEEEEEECCHH
Confidence 346899999999999887665 22 24578999997654
No 233
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.47 E-value=0.0009 Score=60.31 Aligned_cols=37 Identities=19% Similarity=0.155 Sum_probs=27.8
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+++.+|+|+|||+|..+..++ ++ .+..+|+..|+...
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~ 125 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVL--------KH-------DSVEKAILCEVDGL 125 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHT--------TS-------TTCSEEEEEESCHH
T ss_pred CCCCEEEEEcCCcCHHHHHHH--------hc-------CCCCEEEEEECCHH
Confidence 346899999999999887666 32 24578999997653
No 234
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=96.38 E-value=0.0028 Score=57.49 Aligned_cols=37 Identities=16% Similarity=0.104 Sum_probs=28.1
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+++.+|+|+|||+|..+..++ ++ .|..+|+..|+-..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~ 130 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVV--------KH-------PSVESVVQCEIDED 130 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHT--------TC-------TTCCEEEEEESCHH
T ss_pred CCCCEEEEECCCchHHHHHHH--------Hc-------CCCCEEEEEECCHH
Confidence 456899999999999887666 32 24578999997553
No 235
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.37 E-value=0.021 Score=53.16 Aligned_cols=115 Identities=10% Similarity=0.086 Sum_probs=66.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCCC-
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAAG- 128 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~~- 128 (269)
.-+|+|+|||+|..++.++ ++ ..-+|+..|+... +.. .++++. ..++ ..
T Consensus 213 ~~~VLDl~cGtG~~sl~la--------~~--------ga~~V~~vD~s~~----------al~-~A~~N~~~n~~--~~~ 263 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAA--------MG--------GAMATTSVDLAKR----------SRA-LSLAHFEANHL--DMA 263 (385)
T ss_dssp TCEEEEETCTTTHHHHHHH--------HT--------TBSEEEEEESCTT----------HHH-HHHHHHHHTTC--CCT
T ss_pred CCeEEEEeeccCHHHHHHH--------HC--------CCCEEEEEECCHH----------HHH-HHHHHHHHcCC--Ccc
Confidence 4699999999999998777 32 1238999998776 221 121111 0111 01
Q ss_pred c-eEEeecCCCccCCC--C--CCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhh
Q 024331 129 Q-CFFTGVPGSFYGRL--F--PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKC 203 (269)
Q Consensus 129 ~-~f~~~vpgSFy~~l--f--P~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 203 (269)
+ .|+. ++....+ + ...++|++++. |+.+...++.+ ....+++..+++.
T Consensus 264 ~v~~~~---~D~~~~l~~~~~~~~~fD~Ii~D---------PP~~~~~~~~~---------------~~~~~~~~~ll~~ 316 (385)
T 2b78_A 264 NHQLVV---MDVFDYFKYARRHHLTYDIIIID---------PPSFARNKKEV---------------FSVSKDYHKLIRQ 316 (385)
T ss_dssp TEEEEE---SCHHHHHHHHHHTTCCEEEEEEC---------CCCC-----CC---------------CCHHHHHHHHHHH
T ss_pred ceEEEE---CCHHHHHHHHHHhCCCccEEEEC---------CCCCCCChhhH---------------HHHHHHHHHHHHH
Confidence 2 3444 5654422 1 14589999971 33322111111 1134667777777
Q ss_pred hhhhhccCCeEEEEeccc
Q 024331 204 RSEELVAEGRMVLTFLGR 221 (269)
Q Consensus 204 Ra~EL~pGG~lv~~~~g~ 221 (269)
=.+-|+|||.++++....
T Consensus 317 ~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 317 GLEILSENGLIIASTNAA 334 (385)
T ss_dssp HHHTEEEEEEEEEEECCT
T ss_pred HHHhcCCCcEEEEEeCCC
Confidence 778999999999987543
No 236
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.36 E-value=0.016 Score=53.83 Aligned_cols=117 Identities=11% Similarity=0.035 Sum_probs=69.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..|+.++ +. ..-+|+..|+... . +......+. ..+ + ..+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la--------~~--------g~~~v~~vD~s~~-~------l~~a~~n~~-~n~--~--~~~ 268 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAA--------IA--------GADEVIGIDKSPR-A------IETAKENAK-LNG--V--EDR 268 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHH--------HT--------TCSEEEEEESCHH-H------HHHHHHHHH-HTT--C--GGG
T ss_pred CCCeEEEecCCCCHHHHHHH--------HC--------CCCEEEEEeCCHH-H------HHHHHHHHH-HcC--C--Ccc
Confidence 35799999999999998777 32 1247999997543 0 111111111 112 1 012
Q ss_pred -eEEeecCCCccCCCC----CCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 024331 130 -CFFTGVPGSFYGRLF----PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCR 204 (269)
Q Consensus 130 -~f~~~vpgSFy~~lf----P~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 204 (269)
.|+. ++....+. +.+++|++++ . |+.+.. +...+ ....+++..+|..=
T Consensus 269 v~~~~---~d~~~~~~~~~~~~~~fD~Vi~--------d-pP~~~~----------~~~~~-----~~~~~~~~~~l~~~ 321 (396)
T 2as0_A 269 MKFIV---GSAFEEMEKLQKKGEKFDIVVL--------D-PPAFVQ----------HEKDL-----KAGLRAYFNVNFAG 321 (396)
T ss_dssp EEEEE---SCHHHHHHHHHHTTCCEEEEEE--------C-CCCSCS----------SGGGH-----HHHHHHHHHHHHHH
T ss_pred ceEEE---CCHHHHHHHHHhhCCCCCEEEE--------C-CCCCCC----------CHHHH-----HHHHHHHHHHHHHH
Confidence 2333 66655322 2678999997 2 332221 11111 23457888888888
Q ss_pred hhhhccCCeEEEEeccc
Q 024331 205 SEELVAEGRMVLTFLGR 221 (269)
Q Consensus 205 a~EL~pGG~lv~~~~g~ 221 (269)
.+-|+|||.++++....
T Consensus 322 ~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 322 LNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp HTTEEEEEEEEEEECCT
T ss_pred HHhcCCCcEEEEEECCC
Confidence 89999999999887644
No 237
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.27 E-value=0.02 Score=52.91 Aligned_cols=106 Identities=8% Similarity=-0.042 Sum_probs=62.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+| |+|..++.+. ... |..+|+..|+... .+....+... +.|. .
T Consensus 172 ~~~~VLDlG-G~G~~~~~la--------~~~-------~~~~v~~vDi~~~-------~l~~a~~~~~-~~g~-----~- 221 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALM--------LSG-------LPKRIAVLDIDER-------LTKFIEKAAN-EIGY-----E- 221 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHH--------HHT-------CCSEEEEECSCHH-------HHHHHHHHHH-HHTC-----C-
T ss_pred CCCEEEEEC-CCCHHHHHHH--------HhC-------CCCEEEEEECCHH-------HHHHHHHHHH-HcCC-----C-
Confidence 357999999 9999988766 331 4478999998553 1211111111 1121 1
Q ss_pred eEEeecCCCccC-CCC-CCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhh
Q 024331 130 CFFTGVPGSFYG-RLF-PRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEE 207 (269)
Q Consensus 130 ~f~~~vpgSFy~-~lf-P~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 207 (269)
-+..+.+++.. ... +++++|+++++.-+|+. +...||+.=.+-
T Consensus 222 -~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~----------------------------------~~~~~l~~~~~~ 266 (373)
T 2qm3_A 222 -DIEIFTFDLRKPLPDYALHKFDTFITDPPETLE----------------------------------AIRAFVGRGIAT 266 (373)
T ss_dssp -CEEEECCCTTSCCCTTTSSCBSEEEECCCSSHH----------------------------------HHHHHHHHHHHT
T ss_pred -CEEEEEChhhhhchhhccCCccEEEECCCCchH----------------------------------HHHHHHHHHHHH
Confidence 23334578876 222 35799999994322210 125566655678
Q ss_pred hccCCeE-EEEecc
Q 024331 208 LVAEGRM-VLTFLG 220 (269)
Q Consensus 208 L~pGG~l-v~~~~g 220 (269)
|+|||++ ++++..
T Consensus 267 LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 267 LKGPRCAGYFGITR 280 (373)
T ss_dssp BCSTTCEEEEEECT
T ss_pred cccCCeEEEEEEec
Confidence 8999954 666543
No 238
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.26 E-value=0.027 Score=52.04 Aligned_cols=122 Identities=12% Similarity=0.082 Sum_probs=66.6
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
+..+|+|+|||+|..++.++ +++ .+..+|+..|+-.. ... .. . +-
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~--------~~~------~~~~~i~gvDi~~~----------~~~-----~a-~-----~~ 83 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFR--------EAH------GTAYRFVGVEIDPK----------ALD-----LP-P-----WA 83 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HHH------CSCSEEEEEESCTT----------TCC-----CC-T-----TE
T ss_pred CCCEEEECCCCChHHHHHHH--------HHh------CCCCeEEEEECCHH----------HHH-----hC-C-----CC
Confidence 34599999999998877766 332 13478899998665 110 00 0 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEeccccccccccCCCCCCC-CCcceEEcCCCCHHHHHHHHHHH------HHHHHHHHh
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLES-NKGNIFMASTSPPCVLTAYYEQF------QRDFSLFLK 202 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~~P~~l~~-nkg~i~~~~~s~~~v~~ay~~Q~------~~D~~~FL~ 202 (269)
-++ -+++... .+.+++|+++++ |+-... .++++. ..-.+++.+.|.... ...+..|++
T Consensus 84 ~~~---~~D~~~~-~~~~~fD~Ii~N---------PPy~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 148 (421)
T 2ih2_A 84 EGI---LADFLLW-EPGEAFDLILGN---------PPYGIVGEASKYP--IHVFKAVKDLYKKAFSTWKGKYNLYGAFLE 148 (421)
T ss_dssp EEE---ESCGGGC-CCSSCEEEEEEC---------CCCCCBSCTTTCS--BCCCHHHHHHHHHHCTTCCTTCCHHHHHHH
T ss_pred cEE---eCChhhc-CccCCCCEEEEC---------cCccCcccccccc--cccCHHHHHHHHHhhhcccCCccHHHHHHH
Confidence 222 2666653 356789999993 332221 000000 001123333332110 012346666
Q ss_pred hhhhhhccCCeEEEEeccc
Q 024331 203 CRSEELVAEGRMVLTFLGR 221 (269)
Q Consensus 203 ~Ra~EL~pGG~lv~~~~g~ 221 (269)
.=.+-|+|||++++.++..
T Consensus 149 ~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 149 KAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp HHHHHEEEEEEEEEEEEGG
T ss_pred HHHHHhCCCCEEEEEEChH
Confidence 6667788999999988643
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.20 E-value=0.0035 Score=60.37 Aligned_cols=129 Identities=11% Similarity=0.052 Sum_probs=70.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..|+.++ ++. ....+|+.+|+...= +....+.+. +.|. .+
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA--------~~~------~~~g~V~AvDis~~r-------l~~~~~n~~-r~g~-----~n 157 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLA--------AQM------KGKGLLVTNEIFPKR-------AKILSENIE-RWGV-----SN 157 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHH--------HHH------TTCSEEEEECSSHHH-------HHHHHHHHH-HHTC-----SS
T ss_pred CCCEEEEECCCcCHHHHHHH--------HHc------CCCCEEEEEeCCHHH-------HHHHHHHHH-HcCC-----Cc
Confidence 35799999999999999887 443 134689999986541 111111111 1221 23
Q ss_pred eEEeecCCCccCCC-CCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHH----HHHHHHHHHHHHHHhhh
Q 024331 130 CFFTGVPGSFYGRL-FPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLT----AYYEQFQRDFSLFLKCR 204 (269)
Q Consensus 130 ~f~~~vpgSFy~~l-fP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~----ay~~Q~~~D~~~FL~~R 204 (269)
+-+ +-++..... +.++++|.|++ +.|+.-. |.+ . ..+.+.. .......+.-..+|+.=
T Consensus 158 v~v--~~~Da~~l~~~~~~~FD~Il~--------DaPCSg~---G~~--r--r~p~~~~~~~~~~~~~l~~~Q~~iL~~a 220 (456)
T 3m4x_A 158 AIV--TNHAPAELVPHFSGFFDRIVV--------DAPCSGE---GMF--R--KDPNAIKEWTEESPLYCQKRQQEILSSA 220 (456)
T ss_dssp EEE--ECCCHHHHHHHHTTCEEEEEE--------ECCCCCG---GGT--T--TCHHHHHHCCTTHHHHHHHHHHHHHHHH
T ss_pred eEE--EeCCHHHhhhhccccCCEEEE--------CCCCCCc---ccc--c--cCHHHhhhcCHHHHHHHHHHHHHHHHHH
Confidence 222 224443322 23578999986 4454321 111 0 0111111 01122233345667766
Q ss_pred hhhhccCCeEEEEecccC
Q 024331 205 SEELVAEGRMVLTFLGRK 222 (269)
Q Consensus 205 a~EL~pGG~lv~~~~g~~ 222 (269)
.+-|+|||+|+.+++...
T Consensus 221 ~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 221 IKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp HHTEEEEEEEEEEESCCC
T ss_pred HHhcCCCcEEEEEEeecc
Confidence 677899999999987664
No 240
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.11 E-value=0.0069 Score=60.67 Aligned_cols=102 Identities=12% Similarity=0.033 Sum_probs=57.3
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 20 SNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 20 ~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
|...+|+++...+++++.+ .....+..+|+|+|||+|+-+...++ +.++. ...+.||..+-..
T Consensus 333 Ky~~Ye~AI~~Al~d~~~~------~~~~~~~~vVldVGaGrGpLv~~al~----A~a~~-------~~~vkVyAVEknp 395 (637)
T 4gqb_A 333 KYSQYQQAIYKCLLDRVPE------EEKDTNVQVLMVLGAGRGPLVNASLR----AAKQA-------DRRIKLYAVEKNP 395 (637)
T ss_dssp HHHHHHHHHHHHHHHHSCG------GGTTTCEEEEEEESCTTSHHHHHHHH----HHHHT-------TCEEEEEEEESCH
T ss_pred hHHHHHHHHHHHHHHhhhh------ccccCCCcEEEEECCCCcHHHHHHHH----HHHhc-------CCCcEEEEEECCH
Confidence 4555665555554443322 01123568999999999987665552 22221 1347899988633
Q ss_pred CchHHHHHhhHHHHHHHHHhcCCCCCCCCceEEeecCCCccCCCCCCCceeeEec
Q 024331 100 NDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHS 154 (269)
Q Consensus 100 NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfP~~Svd~~~S 154 (269)
| .... ....++.+++ --|.-+-|+..+--+| ..+|+++|
T Consensus 396 ~----A~~a-----~~~v~~N~~~------dkVtVI~gd~eev~LP-EKVDIIVS 434 (637)
T 4gqb_A 396 N----AVVT-----LENWQFEEWG------SQVTVVSSDMREWVAP-EKADIIVS 434 (637)
T ss_dssp H----HHHH-----HHHHHHHTTG------GGEEEEESCTTTCCCS-SCEEEEEC
T ss_pred H----HHHH-----HHHHHhccCC------CeEEEEeCcceeccCC-cccCEEEE
Confidence 2 1111 1122233332 1244455888887777 57999999
No 241
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.08 E-value=0.003 Score=61.91 Aligned_cols=82 Identities=15% Similarity=0.178 Sum_probs=54.3
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-CCCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-GSASGAA 127 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~~~~~~~ 127 (269)
..+.+|+|+|||.|..|..++ ++ -++|...|+... ++ +..+.+. ..+. .
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la--------~~---------ga~V~giD~~~~----------~i-~~a~~~a~~~~~--~ 114 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLA--------SK---------GATIVGIDFQQE----------NI-NVCRALAEENPD--F 114 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESCHH----------HH-HHHHHHHHTSTT--S
T ss_pred CCCCeEEEECCCCcHHHHHHH--------hC---------CCEEEEECCCHH----------HH-HHHHHHHHhcCC--C
Confidence 457999999999998877766 43 278999998765 22 1122221 1110 0
Q ss_pred CceEEeecCCCccCC--CCCCCceeeEecccccccccc
Q 024331 128 GQCFFTGVPGSFYGR--LFPRNSVHLFHSSYSLQWLSQ 163 (269)
Q Consensus 128 ~~~f~~~vpgSFy~~--lfP~~Svd~~~Ss~alHWLS~ 163 (269)
.--|.. ++..+. .++++++|+|+|.-.||++.+
T Consensus 115 ~~~~~~---~~~~~~~~~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 115 AAEFRV---GRIEEVIAALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp EEEEEE---CCHHHHHHHCCTTSCSEEEEESCHHHHHH
T ss_pred ceEEEE---CCHHHHhhhccCCCccEEEECcchhcCCC
Confidence 113544 555554 467889999999999999754
No 242
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.00 E-value=0.0066 Score=54.06 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=26.6
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
+++.+|+|+|||+|..+..++ + . +..+|+..|+-..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~--------~-------~-~~~~v~~vDid~~ 109 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVL--------Q-------H-DVDEVIMVEIDED 109 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHT--------T-------S-CCSEEEEEESCHH
T ss_pred CCCCeEEEEcCCcCHHHHHHH--------h-------C-CCCEEEEEECCHH
Confidence 346899999999998887665 2 1 4468888887543
No 243
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.00 E-value=0.026 Score=51.38 Aligned_cols=85 Identities=9% Similarity=0.015 Sum_probs=47.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|.|||+|..++.+. +..... .....+++..|+-.. ..+.... .+. ..|.. .
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~--------~~~~~~--~~~~~~v~GiDi~~~----~~~~a~~---n~~-~~g~~-----~ 186 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVI--------NQLELK--GDVDVHASGVDVDDL----LISLALV---GAD-LQRQK-----M 186 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHH--------HHHHTT--SSCEEEEEEEESCHH----HHHHHHH---HHH-HHTCC-----C
T ss_pred CCCEEEeCCCCccHHHHHHH--------HHHHHh--cCCCceEEEEECCHH----HHHHHHH---HHH-hCCCC-----c
Confidence 46899999999999887766 322110 012488999997543 0010000 011 11211 1
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccccccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWL 161 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWL 161 (269)
-++. |++... .+...+|+++++--+++.
T Consensus 187 ~i~~---~D~l~~-~~~~~fD~Ii~NPPfg~~ 214 (344)
T 2f8l_A 187 TLLH---QDGLAN-LLVDPVDVVISDLPVGYY 214 (344)
T ss_dssp EEEE---SCTTSC-CCCCCEEEEEEECCCSEE
T ss_pred eEEE---CCCCCc-cccCCccEEEECCCCCCc
Confidence 2333 565553 356889999998766553
No 244
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=95.78 E-value=0.022 Score=52.71 Aligned_cols=74 Identities=15% Similarity=-0.011 Sum_probs=47.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHH---hcCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRK---QLGSASGA 126 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~---~~~~~~~~ 126 (269)
...+|+|+|||+|..++.++ ... +..+|+..|+... +.. ..++ ..|..-
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a--------~~~-------~~~~v~g~Dis~~----------~l~-~A~~n~~~~gl~~-- 268 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELA--------LRR-------YSGEIIGIEKYRK----------HLI-GAEMNALAAGVLD-- 268 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHH--------HTT-------CCSCEEEEESCHH----------HHH-HHHHHHHHTTCGG--
T ss_pred CCCEEEEccCcCcHHHHHHH--------HhC-------CCCeEEEEeCCHH----------HHH-HHHHHHHHcCCCC--
Confidence 35789999999999887766 331 2347999998655 211 1111 112100
Q ss_pred CCceEEeecCCCccCCCCCCCceeeEecc
Q 024331 127 AGQCFFTGVPGSFYGRLFPRNSVHLFHSS 155 (269)
Q Consensus 127 ~~~~f~~~vpgSFy~~lfP~~Svd~~~Ss 155 (269)
.-.|.. +++....+|++++|+++++
T Consensus 269 -~i~~~~---~D~~~~~~~~~~fD~Ii~n 293 (373)
T 3tm4_A 269 -KIKFIQ---GDATQLSQYVDSVDFAISN 293 (373)
T ss_dssp -GCEEEE---CCGGGGGGTCSCEEEEEEE
T ss_pred -ceEEEE---CChhhCCcccCCcCEEEEC
Confidence 113434 8888888889999999994
No 245
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.69 E-value=0.017 Score=58.26 Aligned_cols=121 Identities=16% Similarity=0.069 Sum_probs=67.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCce
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQC 130 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~ 130 (269)
..+|+|+|||+|..|+.++ .. ..-+|+..|+... .+....+.+. ..+... ..-.
T Consensus 540 g~~VLDlg~GtG~~sl~aa--------~~--------ga~~V~aVD~s~~-------al~~a~~N~~-~ngl~~--~~v~ 593 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAG--------LG--------GARSTTTVDMSRT-------YLEWAERNLR-LNGLTG--RAHR 593 (703)
T ss_dssp TCEEEEESCTTCHHHHHHH--------HT--------TCSEEEEEESCHH-------HHHHHHHHHH-HTTCCS--TTEE
T ss_pred CCcEEEeeechhHHHHHHH--------HC--------CCCEEEEEeCCHH-------HHHHHHHHHH-HcCCCc--cceE
Confidence 4699999999999888766 32 1246999998664 1111111111 112110 0113
Q ss_pred EEeecCCCccCC-CCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 024331 131 FFTGVPGSFYGR-LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELV 209 (269)
Q Consensus 131 f~~~vpgSFy~~-lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~ 209 (269)
|+. ++.+.. ....+++|++++ -|+.+..++... . ..+..++...+++.=.+-|+
T Consensus 594 ~i~---~D~~~~l~~~~~~fD~Ii~---------DPP~f~~~~~~~--------~-----~~~~~~~~~~ll~~a~~~Lk 648 (703)
T 3v97_A 594 LIQ---ADCLAWLREANEQFDLIFI---------DPPTFSNSKRME--------D-----AFDVQRDHLALMKDLKRLLR 648 (703)
T ss_dssp EEE---SCHHHHHHHCCCCEEEEEE---------CCCSBC--------------------CCBHHHHHHHHHHHHHHHEE
T ss_pred EEe---cCHHHHHHhcCCCccEEEE---------CCccccCCccch--------h-----HHHHHHHHHHHHHHHHHhcC
Confidence 333 665552 224678999997 243333111000 0 01244677777777778899
Q ss_pred cCCeEEEEecccC
Q 024331 210 AEGRMVLTFLGRK 222 (269)
Q Consensus 210 pGG~lv~~~~g~~ 222 (269)
|||+|++++..+.
T Consensus 649 pgG~L~~s~~~~~ 661 (703)
T 3v97_A 649 AGGTIMFSNNKRG 661 (703)
T ss_dssp EEEEEEEEECCTT
T ss_pred CCcEEEEEECCcc
Confidence 9999998886543
No 246
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=95.64 E-value=0.035 Score=50.22 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=53.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
..-+|+|+|||+|..|..++ ++. .+|+..|+-.. + ++...+.+. . .. +-
T Consensus 50 ~~~~VLEIG~G~G~lT~~La--------~~~---------~~V~aVEid~~-l------i~~a~~~~~-~-~~-----~v 98 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELA--------KNA---------KKVYVIEIDKS-L------EPYANKLKE-L-YN-----NI 98 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHS---------SEEEEEESCGG-G------HHHHHHHHH-H-CS-----SE
T ss_pred CcCEEEEECCCchHHHHHHH--------hcC---------CEEEEEECCHH-H------HHHHHHHhc-c-CC-----Ce
Confidence 35699999999999999887 431 57888887664 1 111111111 1 11 11
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccccccccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ 163 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~ 163 (269)
.++. |++....+|+.++|.++++...||-+.
T Consensus 99 ~vi~---gD~l~~~~~~~~fD~Iv~NlPy~is~p 129 (295)
T 3gru_A 99 EIIW---GDALKVDLNKLDFNKVVANLPYQISSP 129 (295)
T ss_dssp EEEE---SCTTTSCGGGSCCSEEEEECCGGGHHH
T ss_pred EEEE---CchhhCCcccCCccEEEEeCcccccHH
Confidence 3434 899888899999999999988777554
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=95.62 E-value=0.007 Score=54.49 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=46.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..|..++ ++ ..+|+..|+... . +....+... ..+. .+
T Consensus 42 ~~~~VLDiG~G~G~lt~~La--------~~---------~~~v~~vDi~~~-~------~~~a~~~~~-~~~~-----~~ 91 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLL--------PL---------AKKVITIDIDSR-M------ISEVKKRCL-YEGY-----NN 91 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHT--------TT---------SSEEEEECSCHH-H------HHHHHHHHH-HTTC-----CC
T ss_pred CcCEEEEEcCcCcHHHHHHH--------hc---------CCEEEEEECCHH-H------HHHHHHHHH-HcCC-----Cc
Confidence 35799999999999998776 32 257889987543 1 111111111 1121 12
Q ss_pred eEEeecCCCccCCCCCCCceeeEecccccccccc
Q 024331 130 CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQ 163 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS~ 163 (269)
+..+-+++....+ .++|+++++...||.+.
T Consensus 92 --v~~~~~D~~~~~~--~~~D~Vv~n~py~~~~~ 121 (299)
T 2h1r_A 92 --LEVYEGDAIKTVF--PKFDVCTANIPYKISSP 121 (299)
T ss_dssp --EEC----CCSSCC--CCCSEEEEECCGGGHHH
T ss_pred --eEEEECchhhCCc--ccCCEEEEcCCcccccH
Confidence 2223477776544 48999999988887654
No 248
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=95.39 E-value=0.047 Score=45.11 Aligned_cols=77 Identities=16% Similarity=0.157 Sum_probs=46.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcC-CCCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLG-SASGAAG 128 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~-~~~~~~~ 128 (269)
+..+|+|+|||+|..++.+. +. ..-+|+..|+... +. +.++++.. .+. .
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~--------~~--------~~~~v~~vD~~~~----------~~-~~a~~~~~~~~~---~ 98 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGAL--------LL--------GAKEVICVEVDKE----------AV-DVLIENLGEFKG---K 98 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT--------TCSEEEEEESCHH----------HH-HHHHHHTGGGTT---S
T ss_pred CcCEEEEeeCCCCHHHHHHH--------Hc--------CCCEEEEEECCHH----------HH-HHHHHHHHHcCC---C
Confidence 35799999999999888765 32 1137889987543 11 11222110 111 1
Q ss_pred ceEEeecCCCccCCCCCCCceeeEeccccccccc
Q 024331 129 QCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLS 162 (269)
Q Consensus 129 ~~f~~~vpgSFy~~lfP~~Svd~~~Ss~alHWLS 162 (269)
-.+ +.+++.. +| +++|++++.-.+|+.+
T Consensus 99 ~~~---~~~d~~~--~~-~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 99 FKV---FIGDVSE--FN-SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp EEE---EESCGGG--CC-CCCSEEEECCCCSSSS
T ss_pred EEE---EECchHH--cC-CCCCEEEEcCCCcccc
Confidence 123 3367766 24 5899999977777644
No 249
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=95.38 E-value=0.2 Score=45.11 Aligned_cols=20 Identities=30% Similarity=0.479 Sum_probs=16.9
Q ss_pred CceEEEeecCCCCcccHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVA 69 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~ 69 (269)
...+|+|||||.|..|..++
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa 93 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAA 93 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHH
Confidence 35689999999999988666
No 250
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.30 E-value=0.014 Score=54.40 Aligned_cols=117 Identities=11% Similarity=0.016 Sum_probs=64.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc-
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ- 129 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~- 129 (269)
..+|+|+|||+|..++.++ +. ..-+|+..|+... .+....+.+. ..+.. ..+
T Consensus 221 ~~~VLDl~cG~G~~sl~la--------~~--------g~~~V~~vD~s~~-------al~~a~~n~~-~ngl~---~~~v 273 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSAL--------MG--------GCSQVVSVDTSQE-------ALDIARQNVE-LNKLD---LSKA 273 (396)
T ss_dssp TCEEEEESCTTCSHHHHHH--------HT--------TCSEEEEEESCHH-------HHHHHHHHHH-HTTCC---GGGE
T ss_pred CCeEEEeeccCCHHHHHHH--------HC--------CCCEEEEEECCHH-------HHHHHHHHHH-HcCCC---ccce
Confidence 4699999999999999877 32 1247899987543 0111111111 11110 012
Q ss_pred eEEeecCCCccCCCC--C--CCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 024331 130 CFFTGVPGSFYGRLF--P--RNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRS 205 (269)
Q Consensus 130 ~f~~~vpgSFy~~lf--P--~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 205 (269)
.|+. ++....+- + ..++|++++. |+....++..+. . ..+++..++..=.
T Consensus 274 ~~~~---~D~~~~~~~~~~~~~~fD~Ii~d---------pP~~~~~~~~~~--~-------------~~~~~~~~l~~~~ 326 (396)
T 3c0k_A 274 EFVR---DDVFKLLRTYRDRGEKFDVIVMD---------PPKFVENKSQLM--G-------------ACRGYKDINMLAI 326 (396)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCEEEEEEC---------CSSTTTCSSSSS--C-------------CCTHHHHHHHHHH
T ss_pred EEEE---CCHHHHHHHHHhcCCCCCEEEEC---------CCCCCCChhHHH--H-------------HHHHHHHHHHHHH
Confidence 2333 66655321 1 4689999872 332221122211 0 1134556666667
Q ss_pred hhhccCCeEEEEeccc
Q 024331 206 EELVAEGRMVLTFLGR 221 (269)
Q Consensus 206 ~EL~pGG~lv~~~~g~ 221 (269)
+.|+|||.++++....
T Consensus 327 ~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 327 QLLNEGGILLTFSCSG 342 (396)
T ss_dssp HTEEEEEEEEEEECCT
T ss_pred HhcCCCcEEEEEeCCC
Confidence 7889999999987543
No 251
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=95.28 E-value=0.025 Score=50.04 Aligned_cols=34 Identities=3% Similarity=-0.229 Sum_probs=24.9
Q ss_pred CCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 49 PTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
+++.+|+|+|||+|..+..++ + . + .+|...|+-.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll--------~-------~-~-~~v~~veid~ 104 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLF--------K-------Y-D-THIDFVQADE 104 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHT--------T-------S-S-CEEEEECSCH
T ss_pred CCCCEEEEEeCCcCHHHHHHH--------h-------C-C-CEEEEEECCH
Confidence 456899999999998766554 2 2 4 6788888754
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=94.83 E-value=0.016 Score=50.44 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=45.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
...+|+|+|||+|..|..++ ++. .+|+..|+... + .+.++++... . ++
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~--------~~~---------~~v~~vD~~~~----------~-~~~a~~~~~~-~---~~ 77 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELV--------QRC---------NFVTAIEIDHK----------L-CKTTENKLVD-H---DN 77 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHS---------SEEEEECSCHH----------H-HHHHHHHTTT-C---CS
T ss_pred CCCEEEEEeCCchHHHHHHH--------HcC---------CeEEEEECCHH----------H-HHHHHHhhcc-C---CC
Confidence 45799999999999998877 442 57888887553 1 1222222211 1 12
Q ss_pred eEEeecCCCccCCCCCC-CceeeEecccccc
Q 024331 130 CFFTGVPGSFYGRLFPR-NSVHLFHSSYSLQ 159 (269)
Q Consensus 130 ~f~~~vpgSFy~~lfP~-~Svd~~~Ss~alH 159 (269)
+..+-|++....+|+ .++ .++|+...+
T Consensus 78 --v~~~~~D~~~~~~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 78 --FQVLNKDILQFKFPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp --EEEECCCGGGCCCCSSCCC-EEEEECCGG
T ss_pred --eEEEEChHHhCCcccCCCe-EEEEeCCcc
Confidence 222448888888885 455 466654333
No 253
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=94.79 E-value=0.039 Score=55.92 Aligned_cols=109 Identities=14% Similarity=0.097 Sum_probs=57.8
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 20 SNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 20 ~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
+...+|+++..+.+++.++ ..+..+|+|+|||+|+-+...+...-.+=.+ . +.+.....+.||..+--.
T Consensus 388 Ry~~Y~~AI~~al~d~~~~---------~~~~~VVldVGaGtGpLs~~al~A~~~a~~~-~-~~~~~~~~~kVyAVEknp 456 (745)
T 3ua3_A 388 KYDVYGEAVVGALKDLGAD---------GRKTVVIYLLGGGRGPIGTKILKSEREYNNT-F-RQGQESLKVKLYIVEKNP 456 (745)
T ss_dssp HHHHHHHHHHHHHHHHHTT---------CCSEEEEEEESCTTCHHHHHHHHHHHHHHHH-H-STTSCCCEEEEEEEECCH
T ss_pred hHHHHHHHHHHHHHHhhcc---------cCCCcEEEEECCCCCHHHHHHHHHHHHhCcc-c-cccccccccEEEEEeCCh
Confidence 4455555554444443321 2246899999999998876555332211101 0 111233458999999843
Q ss_pred CchHHHHHhhHHHHHHHHHhcCCCCCCCCceEEeecCCCccCCCCC-----CCceeeEec
Q 024331 100 NDFNTIFRSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFP-----RNSVHLFHS 154 (269)
Q Consensus 100 NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfP-----~~Svd~~~S 154 (269)
|-. ..+. .....+++ .. |.-+.|+..+--+| ..-+|+++|
T Consensus 457 ~A~----~~l~-----~~~~Ng~~----d~--VtVI~gd~eev~lp~~~~~~ekVDIIVS 501 (745)
T 3ua3_A 457 NAI----VTLK-----YMNVRTWK----RR--VTIIESDMRSLPGIAKDRGFEQPDIIVS 501 (745)
T ss_dssp HHH----HHHH-----HHHHHTTT----TC--SEEEESCGGGHHHHHHHTTCCCCSEEEE
T ss_pred HHH----HHHH-----HHHhcCCC----Ce--EEEEeCchhhcccccccCCCCcccEEEE
Confidence 311 1111 11112321 12 33345777776676 688999999
No 254
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=94.51 E-value=0.029 Score=49.70 Aligned_cols=23 Identities=22% Similarity=0.306 Sum_probs=19.8
Q ss_pred CceEEEeecCCCCcccHHHHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVASEL 72 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~i 72 (269)
++++|+|+|||+|.|++.+++..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~ 82 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAF 82 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHH
Confidence 57999999999999999887433
No 255
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=94.26 E-value=0.058 Score=49.13 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=25.4
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
...+|+|+|||+|..++. + + ...+|+..|+...
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a--------~---------~~~~V~~vD~s~~ 227 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-C--------K---------NAKKIYAIDINPH 227 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-T--------T---------TSSEEEEEESCHH
T ss_pred CCCEEEEccCccCHHHHh-c--------c---------CCCEEEEEECCHH
Confidence 357999999999999886 6 2 1368999997543
No 256
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=93.93 E-value=0.14 Score=45.17 Aligned_cols=52 Identities=19% Similarity=0.363 Sum_probs=39.1
Q ss_pred CceEEEeecCCCCcccHHHHH------------HHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVAS------------ELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTI 105 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~------------~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntL 105 (269)
..-+|+|+|||+|..|..+++ ..++.+++++. ..+.++++..|...-||..+
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~----~~~~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYN----QQKNITIYQNDALQFDFSSV 92 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHT----TCTTEEEEESCTTTCCGGGS
T ss_pred CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHh----hCCCcEEEEcchHhCCHHHh
Confidence 357999999999999998874 45566666552 13568999999888887654
No 257
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=93.84 E-value=0.25 Score=44.66 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=28.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
..+|+|+|||+|.-|+.++ +.. .+.-+|+.+|+-..
T Consensus 103 g~~VLDlcaG~G~kt~~la--------~~~------~~~g~V~a~D~~~~ 138 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLA--------ALL------KNQGKIFAFDLDAK 138 (309)
T ss_dssp TCEEEESSCTTCHHHHHHH--------HHH------TTCSEEEEEESCHH
T ss_pred CCEEEEeCCChhHHHHHHH--------HHh------CCCCEEEEEeCCHH
Confidence 4699999999999999887 432 13478999998554
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=93.70 E-value=0.025 Score=50.62 Aligned_cols=76 Identities=12% Similarity=0.003 Sum_probs=48.0
Q ss_pred EEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCceEE
Q 024331 53 AIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQCFF 132 (269)
Q Consensus 53 ~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~~f~ 132 (269)
+|+|+|||+|..|..++ ++. .+|+..|+-.. + + +.++++... .++
T Consensus 49 ~VLEIG~G~G~lt~~L~--------~~~---------~~V~avEid~~-~------~----~~l~~~~~~-----~~v-- 93 (271)
T 3fut_A 49 PVFEVGPGLGALTRALL--------EAG---------AEVTAIEKDLR-L------R----PVLEETLSG-----LPV-- 93 (271)
T ss_dssp CEEEECCTTSHHHHHHH--------HTT---------CCEEEEESCGG-G------H----HHHHHHTTT-----SSE--
T ss_pred eEEEEeCchHHHHHHHH--------HcC---------CEEEEEECCHH-H------H----HHHHHhcCC-----CCE--
Confidence 99999999999998887 431 57888887664 1 1 223322211 122
Q ss_pred eecCCCccCCCCCCC-ceeeEeccc--------ccccccc
Q 024331 133 TGVPGSFYGRLFPRN-SVHLFHSSY--------SLQWLSQ 163 (269)
Q Consensus 133 ~~vpgSFy~~lfP~~-Svd~~~Ss~--------alHWLS~ 163 (269)
..+-|++....+|+. ..|.++++. -+|||.+
T Consensus 94 ~vi~~D~l~~~~~~~~~~~~iv~NlPy~iss~il~~ll~~ 133 (271)
T 3fut_A 94 RLVFQDALLYPWEEVPQGSLLVANLPYHIATPLVTRLLKT 133 (271)
T ss_dssp EEEESCGGGSCGGGSCTTEEEEEEECSSCCHHHHHHHHHH
T ss_pred EEEECChhhCChhhccCccEEEecCcccccHHHHHHHhcC
Confidence 223388888777753 578888765 3456665
No 259
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=93.68 E-value=0.078 Score=50.21 Aligned_cols=33 Identities=24% Similarity=0.103 Sum_probs=25.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
.-+|+|+|||+|..++.++ +. ..+|+..|....
T Consensus 291 ~~~VLDlgcG~G~~sl~la--------~~---------~~~V~gvD~s~~ 323 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLA--------KR---------GFNVKGFDSNEF 323 (425)
T ss_dssp SSEEEEETCTTTHHHHHHH--------HT---------TCEEEEEESCHH
T ss_pred CCEEEEeeccchHHHHHHH--------Hc---------CCEEEEEECCHH
Confidence 4699999999999998776 32 147889887554
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=93.36 E-value=0.59 Score=43.44 Aligned_cols=90 Identities=14% Similarity=0.046 Sum_probs=48.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHH-----------------------HHHHHHHHhcCCCCCcceEEecCCCCCchHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVASELI-----------------------KVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIF 106 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii-----------------------~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF 106 (269)
...+|+|.|||+|..++..+.... +.+++.........+..+|+..|+-.. .
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~---a-- 269 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEE---S-- 269 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHH---H--
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHH---H--
Confidence 357899999999998877664321 222222111112235578999998654 0
Q ss_pred HhhHHHHHHHHHhcCCCCCCCCceEEeecCCCccCCCCCCCceeeEec
Q 024331 107 RSLASFQKILRKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHS 154 (269)
Q Consensus 107 ~~l~~~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfP~~Svd~~~S 154 (269)
+..-...+. ..|..- .-.|.. +++.....| .++|++++
T Consensus 270 --i~~Ar~Na~-~~gl~~---~i~~~~---~D~~~l~~~-~~~D~Iv~ 307 (385)
T 3ldu_A 270 --IDIARENAE-IAGVDE---YIEFNV---GDATQFKSE-DEFGFIIT 307 (385)
T ss_dssp --HHHHHHHHH-HHTCGG---GEEEEE---CCGGGCCCS-CBSCEEEE
T ss_pred --HHHHHHHHH-HcCCCC---ceEEEE---CChhhcCcC-CCCcEEEE
Confidence 111111111 112100 012333 788876654 58999999
No 261
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=93.22 E-value=0.99 Score=40.69 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=25.5
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
...+|+|||||.|..+..++ ++ .+.-.|+..|+-.+
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa--------~~-------~gv~sV~GvdvG~d 125 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAA--------SL-------KNVKKVMAFTLGVQ 125 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHH--------TS-------TTEEEEEEECCCCT
T ss_pred CCCEEEEeCCCCCHHHHHHH--------Hh-------cCCCeeeeEEeccC
Confidence 35699999999999988666 22 13455667777654
No 262
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=92.91 E-value=0.81 Score=42.70 Aligned_cols=87 Identities=11% Similarity=0.051 Sum_probs=48.3
Q ss_pred CceEEEeecCCCCcccHHHHHHHH-----------------------HHHHHHHHhcCCCCCcceEEecCCCCCchHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVASELI-----------------------KVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIF 106 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii-----------------------~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF 106 (269)
...+|+|.+||+|..++..+.... +.+++.....-...+..+|+..|.-..
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~------ 274 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDAR------ 274 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH------
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHH------
Confidence 357899999999988776654322 122222111112235578999997654
Q ss_pred HhhHHHHHHHHH---hcCCCCCCCCceEEeecCCCccCCCCCCCceeeEec
Q 024331 107 RSLASFQKILRK---QLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHS 154 (269)
Q Consensus 107 ~~l~~~~~~~~~---~~~~~~~~~~~~f~~~vpgSFy~~lfP~~Svd~~~S 154 (269)
+. +..+. ..|..- .-.|.. +++.....| .++|++++
T Consensus 275 ----al-~~Ar~Na~~~gl~~---~I~~~~---~D~~~~~~~-~~fD~Iv~ 313 (393)
T 3k0b_A 275 ----LI-EIAKQNAVEAGLGD---LITFRQ---LQVADFQTE-DEYGVVVA 313 (393)
T ss_dssp ----HH-HHHHHHHHHTTCTT---CSEEEE---CCGGGCCCC-CCSCEEEE
T ss_pred ----HH-HHHHHHHHHcCCCC---ceEEEE---CChHhCCCC-CCCCEEEE
Confidence 21 11211 122110 113444 788876655 48999998
No 263
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=92.89 E-value=1.3 Score=45.65 Aligned_cols=129 Identities=13% Similarity=0.070 Sum_probs=69.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhc-C--CCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQL-G--SASGA 126 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~-~--~~~~~ 126 (269)
...+|+|.|||+|...+.++ ++.. .....+++..|+-..=. ........... + .+.
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA--------~~l~----ei~~~~IyGvEIDp~Al-------~LAK~RlNL~lN~LlhGi-- 379 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVS--------AGFN----NVMPRQIWANDIETLFL-------ELLSIRLGLLFPQLVSSN-- 379 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHH--------HTST----TCCGGGEEEECSCGGGH-------HHHHHHHHTTSTTTCBTT--
T ss_pred CCCEEEECCCCccHHHHHHH--------HHhc----ccCCCeEEEEECCHHHH-------HHHHHHHHHHHhhhhcCC--
Confidence 46799999999998766554 2211 11237899999866511 00000010000 0 111
Q ss_pred CCceEEeecCCCccC-CCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHH----------
Q 024331 127 AGQCFFTGVPGSFYG-RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQR---------- 195 (269)
Q Consensus 127 ~~~~f~~~vpgSFy~-~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~---------- 195 (269)
....+ ..++|.. ...+...+|++++ -|+-.. ....+...+.|...+..
T Consensus 380 -~~~~I--~~dD~L~~~~~~~~kFDVVIg---------NPPYg~---------~~~~~~e~kd~~~r~~~g~p~~p~s~~ 438 (878)
T 3s1s_A 380 -NAPTI--TGEDVCSLNPEDFANVSVVVM---------NPPYVS---------GVTDPAIKRKFAHKIIQLTGNRPQTLF 438 (878)
T ss_dssp -BCCEE--ECCCGGGCCGGGGTTEEEEEE---------CCBCCS---------SCCCHHHHHHHHHHHHHHHSSCCSSCS
T ss_pred -CcceE--EecchhcccccccCCCCEEEE---------CCCccc---------cccchhhhhhHHHHhhhhccccccccc
Confidence 11122 2355655 2445678999999 355432 11122333334332222
Q ss_pred ----HHHHHHhhhhhhhccCCeEEEEecc
Q 024331 196 ----DFSLFLKCRSEELVAEGRMVLTFLG 220 (269)
Q Consensus 196 ----D~~~FL~~Ra~EL~pGG~lv~~~~g 220 (269)
-...|+..=.+-|+|||++++.++.
T Consensus 439 G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 439 GQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp SSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred cccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 1445777767789999999998864
No 264
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=92.72 E-value=0.22 Score=46.91 Aligned_cols=73 Identities=18% Similarity=0.115 Sum_probs=44.2
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
..-+|+|+|||+|..++.++ +. ..+|+..|.... .+......+. ..+ . .+-
T Consensus 286 ~~~~VLDlgcG~G~~~~~la--------~~---------~~~V~gvD~s~~-------al~~A~~n~~-~~~--~--~~v 336 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLA--------TQ---------AASVVGVEGVPA-------LVEKGQQNAR-LNG--L--QNV 336 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHH--------TT---------SSEEEEEESCHH-------HHHHHHHHHH-HTT--C--CSE
T ss_pred CCCEEEECCCCCCHHHHHHH--------hh---------CCEEEEEeCCHH-------HHHHHHHHHH-HcC--C--Cce
Confidence 34699999999999999877 22 267899987654 1111111111 112 1 012
Q ss_pred eEEeecCCCccC----CCCCCCceeeEec
Q 024331 130 CFFTGVPGSFYG----RLFPRNSVHLFHS 154 (269)
Q Consensus 130 ~f~~~vpgSFy~----~lfP~~Svd~~~S 154 (269)
.|+. +++.. ..++++++|++++
T Consensus 337 ~f~~---~d~~~~l~~~~~~~~~fD~Vv~ 362 (433)
T 1uwv_A 337 TFYH---ENLEEDVTKQPWAKNGFDKVLL 362 (433)
T ss_dssp EEEE---CCTTSCCSSSGGGTTCCSEEEE
T ss_pred EEEE---CCHHHHhhhhhhhcCCCCEEEE
Confidence 3444 56655 3467789999998
No 265
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=92.35 E-value=0.68 Score=45.21 Aligned_cols=92 Identities=13% Similarity=0.025 Sum_probs=44.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHHHHHhhHHHHHHHHHhcCCCCCCCCc
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNTIFRSLASFQKILRKQLGSASGAAGQ 129 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~~~~~~~~~~ 129 (269)
.+.+|+|.+||||...+.++..+.+.-.+............+++..|+-.. ..+.-.+. +.- .|.. .+
T Consensus 244 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~----~~~lA~~N---l~l-~gi~----~~ 311 (544)
T 3khk_A 244 YKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPT----TWKLAAMN---MVI-RGID----FN 311 (544)
T ss_dssp CSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHH----HHHHHHHH---HHH-TTCC----CB
T ss_pred CCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHH----HHHHHHHH---HHH-hCCC----cc
Confidence 345999999999987666554443222111000000001478898887432 11100000 000 1111 12
Q ss_pred eEEeecCCC-ccCCCCCCCceeeEecc
Q 024331 130 CFFTGVPGS-FYGRLFPRNSVHLFHSS 155 (269)
Q Consensus 130 ~f~~~vpgS-Fy~~lfP~~Svd~~~Ss 155 (269)
+ .-+.|+ +....++...+|+++++
T Consensus 312 i--~i~~gDtL~~~~~~~~~fD~Iv~N 336 (544)
T 3khk_A 312 F--GKKNADSFLDDQHPDLRADFVMTN 336 (544)
T ss_dssp C--CSSSCCTTTSCSCTTCCEEEEEEC
T ss_pred c--ceeccchhcCcccccccccEEEEC
Confidence 1 112344 45556788899999994
No 266
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=91.83 E-value=0.88 Score=42.39 Aligned_cols=21 Identities=24% Similarity=0.317 Sum_probs=17.0
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVAS 70 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~ 70 (269)
...+|+|.+||+|...+..+.
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~ 214 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAM 214 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHH
Confidence 357899999999988776664
No 267
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=90.79 E-value=0.4 Score=45.15 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=17.4
Q ss_pred ceEEEeecCCCCcccHHHHHHH
Q 024331 51 KVAIADLGCSSGPNTLLVASEL 72 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~i 72 (269)
..+|+|.|||+|...+.+.+.+
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l 193 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYM 193 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHH
T ss_pred CCEEeccCCCcchHHHHHHHHH
Confidence 4699999999998877666443
No 268
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=90.50 E-value=2.6 Score=38.23 Aligned_cols=38 Identities=21% Similarity=0.134 Sum_probs=27.8
Q ss_pred CCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 48 SPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 48 ~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
..+..+|+|+|||.|..|..++ ++ .+...|+..|+-.+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~--------~~-------~gv~sV~Gvdlg~~ 116 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAA--------AQ-------KEVMSVKGYTLGIE 116 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHH--------TS-------TTEEEEEEECCCCT
T ss_pred CCCCCEEEEcCCCCCHHHHHHH--------Hh-------cCCceeeeEEeccc
Confidence 3456899999999999988777 32 13456777888655
No 269
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=90.19 E-value=0.21 Score=45.11 Aligned_cols=19 Identities=16% Similarity=0.184 Sum_probs=17.4
Q ss_pred ceEEEeecCCCCcccHHHH
Q 024331 51 KVAIADLGCSSGPNTLLVA 69 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~ 69 (269)
.-+|+|+|||+|..|+.++
T Consensus 27 g~~vLD~g~G~G~~s~~la 45 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAIL 45 (301)
T ss_dssp TCEEEETTCTTSHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHH
Confidence 4699999999999999888
No 270
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=89.97 E-value=0.4 Score=42.00 Aligned_cols=54 Identities=11% Similarity=0.036 Sum_probs=33.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHH----------HHHHHHHhcCCCCCcceEEecCCCCCchHHHH
Q 024331 51 KVAIADLGCSSGPNTLLVASELIK----------VVNKICDKLGSQLPEFQVFLNDLPGNDFNTIF 106 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~----------~i~~~~~~~~~~~p~~qv~~nDLP~NDFntLF 106 (269)
.-+|+|+|||+|..|. +. ..-+ .+.+..++.-...+.++++..|.-.-||..+|
T Consensus 22 ~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~ 85 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELA 85 (252)
T ss_dssp TCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHH
T ss_pred cCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhh
Confidence 4689999999999999 43 2110 11111111111124688899888887887665
No 271
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=89.80 E-value=0.86 Score=42.69 Aligned_cols=90 Identities=18% Similarity=0.118 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHhhccc-----CCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchHH
Q 024331 30 SIAKPITEEAMTKLFCS-----TSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFNT 104 (269)
Q Consensus 30 ~~~~~~l~~ai~~~~~~-----~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFnt 104 (269)
+++.=.|++|+...... ......+++|+||+.|.-|..++ ++ ...|+..|.-.=|
T Consensus 186 SRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~--------~r---------g~~V~aVD~~~l~--- 245 (375)
T 4auk_A 186 SRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLV--------KR---------NMWVYSVDNGPMA--- 245 (375)
T ss_dssp CTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHH--------HT---------TCEEEEECSSCCC---
T ss_pred CHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHH--------HC---------CCEEEEEEhhhcC---
Confidence 33444567776654211 13346899999999999998876 43 3689999953211
Q ss_pred HHHhhHHHHHHHHHhcCCCCCCCCc-eEEeecCCCccCCCCCCCceeeEecccccc
Q 024331 105 IFRSLASFQKILRKQLGSASGAAGQ-CFFTGVPGSFYGRLFPRNSVHLFHSSYSLQ 159 (269)
Q Consensus 105 LF~~l~~~~~~~~~~~~~~~~~~~~-~f~~~vpgSFy~~lfP~~Svd~~~Ss~alH 159 (269)
+ ++... +. .+ +-++.+....+.+.+|+++|=.+.+
T Consensus 246 -----~----~l~~~--------~~V~~---~~~d~~~~~~~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 246 -----Q----SLMDT--------GQVTW---LREDGFKFRPTRSNISWMVCDMVEK 281 (375)
T ss_dssp -----H----HHHTT--------TCEEE---ECSCTTTCCCCSSCEEEEEECCSSC
T ss_pred -----h----hhccC--------CCeEE---EeCccccccCCCCCcCEEEEcCCCC
Confidence 1 12110 12 33 3478888888888999999955443
No 272
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=89.15 E-value=0.33 Score=41.66 Aligned_cols=34 Identities=26% Similarity=0.267 Sum_probs=26.0
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
...+|+|+|||+|..|..++ ++. .+|+..|+...
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~--------~~~---------~~v~~id~~~~ 62 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLA--------KIS---------KQVTSIELDSH 62 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHH--------HHS---------SEEEESSSSCS
T ss_pred CCCEEEEEeCCCCHHHHHHH--------HhC---------CeEEEEECCHH
Confidence 45799999999999999887 431 46777776554
No 273
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=89.09 E-value=0.39 Score=39.55 Aligned_cols=35 Identities=11% Similarity=0.184 Sum_probs=27.2
Q ss_pred CceEEEeecCCCC-cccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 50 TKVAIADLGCSSG-PNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 50 ~~~~IaD~GCs~G-~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
.+.+|+|+|||.| .|+..+. +. ..+.|...|+-..
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La--------~~--------~g~~V~atDInp~ 70 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIR--------KH--------SKVDLVLTDIKPS 70 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHH--------HH--------SCCEEEEECSSCS
T ss_pred CCCcEEEEccCCChHHHHHHH--------Hh--------CCCeEEEEECCcc
Confidence 3579999999999 4888777 53 2488999997554
No 274
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=88.85 E-value=0.46 Score=42.32 Aligned_cols=21 Identities=19% Similarity=0.153 Sum_probs=18.4
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVAS 70 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~ 70 (269)
...+|+|+|||+|..|..+++
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~ 62 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIA 62 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHH
Confidence 357999999999999998884
No 275
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=88.67 E-value=0.18 Score=44.15 Aligned_cols=22 Identities=14% Similarity=0.267 Sum_probs=18.7
Q ss_pred CceEEEeecCCCCcccHHHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVASE 71 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ 71 (269)
..-+|+|+|||+|..|..+++.
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~ 52 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQH 52 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTS
T ss_pred CcCEEEEEcCchHHHHHHHHHc
Confidence 3579999999999999988754
No 276
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=87.85 E-value=0.37 Score=43.10 Aligned_cols=34 Identities=15% Similarity=0.070 Sum_probs=27.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
.-+|+|+|||+|+.|+.++ ++ ...+|+..|+-..
T Consensus 126 g~~VlD~~aG~G~~~i~~a--------~~--------g~~~V~avD~np~ 159 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIA--------VY--------GKAKVIAIEKDPY 159 (278)
T ss_dssp TCEEEETTCTTTTTTHHHH--------HH--------TCCEEEEECCCHH
T ss_pred CCEEEEecCcCcHHHHHHH--------Hh--------cCCeEEEEECCHH
Confidence 5799999999999999877 44 2358999998544
No 277
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=87.39 E-value=5.3 Score=38.86 Aligned_cols=38 Identities=18% Similarity=0.109 Sum_probs=26.7
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
...+|+|.+||||...+.+.+ ... ..+..+++..|+-.
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~--------~l~----~~~~~~i~G~Eid~ 258 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKR--------YSR----QPQTVVYFGQELNT 258 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHH--------HCS----CTTTCEEEEEESCH
T ss_pred CCCEEeecccchhHHHHHHHH--------HHH----hccCceEEEEECcH
Confidence 457999999999988776663 211 12358899988744
No 278
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=87.32 E-value=1.2 Score=40.82 Aligned_cols=62 Identities=23% Similarity=0.361 Sum_probs=38.7
Q ss_pred CCCceEEEeecC------CCCcccHHHHHHHHHHHHHHHHhcCCCCCc-ceEEecCCCCCchHHHHHhhHHHHHHHHHhc
Q 024331 48 SPTKVAIADLGC------SSGPNTLLVASELIKVVNKICDKLGSQLPE-FQVFLNDLPGNDFNTIFRSLASFQKILRKQL 120 (269)
Q Consensus 48 ~~~~~~IaD~GC------s~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~-~qv~~nDLP~NDFntLF~~l~~~~~~~~~~~ 120 (269)
-|...+|+|+|+ +.|. .+ + +++ .|+ ..|+.+||- |+.+
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS---~V-------L-r~~------~p~g~~VVavDL~--~~~s---------------- 151 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT---AV-------L-RQW------LPTGTLLVDSDLN--DFVS---------------- 151 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH---HH-------H-HHH------SCTTCEEEEEESS--CCBC----------------
T ss_pred ecCCCEEEeCCCCCCCCCCCcH---HH-------H-HHh------CCCCcEEEEeeCc--cccc----------------
Confidence 356799999996 6665 11 2 333 144 588888874 3310
Q ss_pred CCCCCCCCceEEeecCCCccCCCCCCCceeeEec
Q 024331 121 GSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHS 154 (269)
Q Consensus 121 ~~~~~~~~~~f~~~vpgSFy~~lfP~~Svd~~~S 154 (269)
. .++++. |++.. +.....+|++.|
T Consensus 152 --d----a~~~Iq---GD~~~-~~~~~k~DLVIS 175 (344)
T 3r24_A 152 --D----ADSTLI---GDCAT-VHTANKWDLIIS 175 (344)
T ss_dssp --S----SSEEEE---SCGGG-EEESSCEEEEEE
T ss_pred --C----CCeEEE---ccccc-cccCCCCCEEEe
Confidence 0 245655 77643 555688999999
No 279
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=84.31 E-value=5.7 Score=39.82 Aligned_cols=21 Identities=24% Similarity=0.278 Sum_probs=16.9
Q ss_pred CceEEEeecCCCCcccHHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVAS 70 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~ 70 (269)
...+|+|.+||||...+..+.
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~ 210 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAM 210 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHH
Confidence 346899999999988776654
No 280
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=80.37 E-value=0.88 Score=42.28 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=27.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
..+|+|+|||+|.-++.++ ++. +..+|+++|+-..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a--------~~~-------~~~~V~avDi~~~ 82 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFA--------LET-------PAEEVWLNDISED 82 (378)
T ss_dssp CSEEEESSCTTSHHHHHHH--------HHS-------SCSEEEEEESCHH
T ss_pred CCEEEECCCchhHHHHHHH--------HhC-------CCCeEEEEECCHH
Confidence 5799999999999999887 432 3467999998654
No 281
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=79.87 E-value=0.58 Score=41.08 Aligned_cols=32 Identities=13% Similarity=0.178 Sum_probs=24.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPG 99 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~ 99 (269)
..+|+|+|||+|..|+.++ ++ ..+|+..|...
T Consensus 84 ~~~VLDlgcG~G~~a~~lA--------~~---------g~~V~~vD~s~ 115 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLA--------SL---------GLTVTAFEQHP 115 (258)
T ss_dssp CCCEEETTCTTCHHHHHHH--------HT---------TCCEEEEECCH
T ss_pred cCeEEEeeCccCHHHHHHH--------Hh---------CCEEEEEECCh
Confidence 4689999999999999887 32 15688887654
No 282
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=77.05 E-value=1.9 Score=40.77 Aligned_cols=19 Identities=16% Similarity=0.218 Sum_probs=16.9
Q ss_pred ceEEEeecCCCCcccHHHH
Q 024331 51 KVAIADLGCSSGPNTLLVA 69 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~ 69 (269)
.-+|+|+|||+|..++.+.
T Consensus 94 g~~VLDLgcG~G~~al~LA 112 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALM 112 (410)
T ss_dssp TCEEEESSCSSSHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHH
Confidence 4789999999999998776
No 283
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=72.83 E-value=6.5 Score=34.66 Aligned_cols=70 Identities=23% Similarity=0.295 Sum_probs=37.9
Q ss_pred CCccC--CCCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccCCeE
Q 024331 137 GSFYG--RLFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRM 214 (269)
Q Consensus 137 gSFy~--~lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~l 214 (269)
|+... ..+|++|+|++++ -|+.... .-|..........+.| ..+..++..+++.=.+.|+|||.+
T Consensus 27 gD~~~~l~~l~~~s~DlIvt---------dPPY~~~---~~y~~~~~~~~~~~~~-~~~l~~l~~~~~~~~rvLk~~G~l 93 (297)
T 2zig_A 27 GDAREVLASFPEASVHLVVT---------SPPYWTL---KRYEDTPGQLGHIEDY-EAFLDELDRVWREVFRLLVPGGRL 93 (297)
T ss_dssp SCHHHHHTTSCTTCEEEEEE---------CCCCCCC---C-------CCHHHHHH-HHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred CcHHHHHhhCCCCceeEEEE---------CCCCCCc---cccCCChhhhcccccH-HHHHHHHHHHHHHHHHHcCCCcEE
Confidence 66654 4578999999999 2444321 1111100000011222 224445556666557889999999
Q ss_pred EEEec
Q 024331 215 VLTFL 219 (269)
Q Consensus 215 v~~~~ 219 (269)
++..-
T Consensus 94 ~i~~~ 98 (297)
T 2zig_A 94 VIVVG 98 (297)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 98764
No 284
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=71.82 E-value=2.1 Score=42.36 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=19.7
Q ss_pred CceEEEeecCCCCcccHHHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVASE 71 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ 71 (269)
++++|+|+|.|+|.|.+.+++.
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~ 79 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRD 79 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHH
T ss_pred CceEEEEecCchHHHHHHHHHH
Confidence 5799999999999999988854
No 285
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=68.93 E-value=5.9 Score=36.17 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=27.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCch
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDF 102 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDF 102 (269)
..+|+|+|||+|..|..++ .+ ..--.|+..|+-.++-
T Consensus 95 ~~~VlDLGaapGGwsq~~~--------~~-------~gv~~V~avdvG~~~h 131 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMA--------TQ-------KRVQEVRGYTKGGPGH 131 (321)
T ss_dssp CEEEEEETCTTCHHHHHHT--------TC-------TTEEEEEEECCCSTTS
T ss_pred CCEEEEeCCCCCcHHHHHH--------hh-------cCCCEEEEEEcCCCCc
Confidence 4699999999999987555 22 1223799999988843
No 286
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=68.79 E-value=2.9 Score=38.12 Aligned_cols=32 Identities=19% Similarity=0.273 Sum_probs=24.3
Q ss_pred eEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 52 ~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
-+|+|+|||+|..|+.++ +. --+|+..|....
T Consensus 215 ~~vLDl~cG~G~~~l~la--------~~---------~~~V~gvd~~~~ 246 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALA--------RN---------FDRVLATEIAKP 246 (369)
T ss_dssp SEEEEESCTTSHHHHHHG--------GG---------SSEEEEECCCHH
T ss_pred CEEEEccCCCCHHHHHHH--------hc---------CCEEEEEECCHH
Confidence 579999999999999666 22 147888887554
No 287
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=64.67 E-value=5 Score=35.66 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=27.9
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCch
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDF 102 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDF 102 (269)
...+|+|+|||.|..|..++ .+ . ..-.|+..|+-..+-
T Consensus 78 ~g~~VvDLGaapGGWSq~~a--------~~------~-g~~~V~avdvG~~gh 115 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCA--------GL------K-KVTEVRGYTKGGPGH 115 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHH--------TS------T-TEEEEEEECCCSTTS
T ss_pred CCCEEEEcCCCCCcHHHHHH--------Hh------c-CCCEEEEEecCCCCc
Confidence 35699999999999988665 32 1 223799999987743
No 288
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=63.99 E-value=2.3 Score=37.42 Aligned_cols=32 Identities=13% Similarity=0.186 Sum_probs=25.5
Q ss_pred eEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 52 VAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 52 ~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
.+|+|+|||+|..++.++ .+ ..+|++.|.-..
T Consensus 90 ~~VLDl~~G~G~dal~lA--------~~---------g~~V~~vE~~~~ 121 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLA--------SV---------GCRVRMLERNPV 121 (258)
T ss_dssp CCEEETTCTTCHHHHHHH--------HH---------TCCEEEEECCHH
T ss_pred CEEEEcCCcCCHHHHHHH--------Hc---------CCEEEEEECCHH
Confidence 799999999999999888 43 146888886553
No 289
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=61.57 E-value=6.7 Score=36.58 Aligned_cols=67 Identities=13% Similarity=0.040 Sum_probs=42.1
Q ss_pred CCCCchHHHhcHHHHHHHHHHHHHHHHHHHhhcccCCCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcce
Q 024331 12 GVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQ 91 (269)
Q Consensus 12 G~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~q 91 (269)
|.....|+-+...-|.....+...+.+. .....+|+|++||+|..++.++ .+. ...-+
T Consensus 22 ~~~~~Ffn~~~~~nR~l~~~~~~~~~~~--------~~~g~~VLDlfaGtG~~sl~aa--------~~~------~ga~~ 79 (392)
T 3axs_A 22 SDMPVFYNPRMRVNRDLAVLGLEYLCKK--------LGRPVKVADPLSASGIRAIRFL--------LET------SCVEK 79 (392)
T ss_dssp TTCCSSCCGGGHHHHHHHHHHHHHHHHH--------HCSCEEEEESSCTTSHHHHHHH--------HHC------SCEEE
T ss_pred CCCCEEEcCCcHHHHHHHHHHHHHHhhc--------cCCCCEEEECCCcccHHHHHHH--------HhC------CCCCE
Confidence 4456788666666555544433333210 0134799999999999999887 331 01257
Q ss_pred EEecCCCCC
Q 024331 92 VFLNDLPGN 100 (269)
Q Consensus 92 v~~nDLP~N 100 (269)
|+++|+-..
T Consensus 80 V~avDi~~~ 88 (392)
T 3axs_A 80 AYANDISSK 88 (392)
T ss_dssp EEEECSCHH
T ss_pred EEEEECCHH
Confidence 999997654
No 290
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=56.15 E-value=5.2 Score=35.26 Aligned_cols=33 Identities=12% Similarity=0.054 Sum_probs=24.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
.-+|+|++||+|..++.++ +. ...++..|+...
T Consensus 236 ~~~vlD~f~GsGt~~~~a~--------~~---------g~~~~g~e~~~~ 268 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAA--------RW---------GRRALGVELVPR 268 (297)
T ss_dssp TCEEEETTCTTTHHHHHHH--------HT---------TCEEEEEESCHH
T ss_pred CCEEEECCCCCCHHHHHHH--------Hc---------CCeEEEEeCCHH
Confidence 4689999999998877655 22 246888887664
No 291
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=55.33 E-value=7.5 Score=35.30 Aligned_cols=22 Identities=23% Similarity=0.309 Sum_probs=18.8
Q ss_pred CceEEEeecCCCCcccHHHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVASE 71 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ 71 (269)
.+++|+|+|=|+|.|++..+..
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~ 117 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKH 117 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHH
T ss_pred CCcEEEEeCCCccHHHHHHHHH
Confidence 5799999999999998877643
No 292
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=54.46 E-value=48 Score=30.33 Aligned_cols=38 Identities=21% Similarity=0.166 Sum_probs=28.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCchH
Q 024331 51 KVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDFN 103 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDFn 103 (269)
..+|+|+-+|.|.-|+.++ +.. +.-.|+.+|....-..
T Consensus 149 g~~VLD~CAaPGGKT~~la--------~~~-------~~~~l~A~D~~~~R~~ 186 (359)
T 4fzv_A 149 GDIVLDLCAAPGGKTLALL--------QTG-------CCRNLAANDLSPSRIA 186 (359)
T ss_dssp TEEEEESSCTTCHHHHHHH--------HTT-------CEEEEEEECSCHHHHH
T ss_pred CCEEEEecCCccHHHHHHH--------Hhc-------CCCcEEEEcCCHHHHH
Confidence 4699999999999998776 321 2357999998766433
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=46.95 E-value=11 Score=33.63 Aligned_cols=20 Identities=30% Similarity=0.499 Sum_probs=17.3
Q ss_pred CceEEEeecCCCCcccHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVA 69 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~ 69 (269)
...+|+|||||-|.=|...+
T Consensus 73 pg~~VVDLGaAPGGWSQvAa 92 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAA 92 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHT
T ss_pred CCCEEEEcCCCCCHHHHHHh
Confidence 46899999999999887666
No 294
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=44.91 E-value=8.4 Score=35.77 Aligned_cols=37 Identities=19% Similarity=0.135 Sum_probs=26.4
Q ss_pred CCCceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCC
Q 024331 48 SPTKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGN 100 (269)
Q Consensus 48 ~~~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~N 100 (269)
.+++.+|+|+|||+|..+..++ ++ .+ .+|...|+-..
T Consensus 186 ~p~pkrVL~IGgG~G~~arell--------k~-------~~-~~Vt~VEID~~ 222 (364)
T 2qfm_A 186 DYTGKDVLILGGGDGGILCEIV--------KL-------KP-KMVTMVEIDQM 222 (364)
T ss_dssp CCTTCEEEEEECTTCHHHHHHH--------TT-------CC-SEEEEEESCHH
T ss_pred CCCCCEEEEEECChhHHHHHHH--------HC-------CC-CEEEEEECCHH
Confidence 3578999999999998766555 22 13 57777776543
No 295
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=36.47 E-value=38 Score=30.15 Aligned_cols=58 Identities=24% Similarity=0.337 Sum_probs=32.3
Q ss_pred CCCCCceeeEeccccccccccCCCCCCCCCcceEEcCCCCHHHHHHHHHHHHHHHHHHHhhhhhhhccCCeEEEEec
Q 024331 143 LFPRNSVHLFHSSYSLQWLSQVPDGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFL 219 (269)
Q Consensus 143 lfP~~Svd~~~Ss~alHWLS~~P~~l~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~ 219 (269)
.+|++|+|++++. |+.-.. .+.-| .. . ..+.| ...+...|+.=.+-|+|||.+++..-
T Consensus 28 ~l~~~svDlI~tD---------PPY~~~-~~~~y-~~--~--~~~~~----~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 28 SFPEESISLVMTS---------PPFALQ-RKKEY-GN--L--EQHEY----VDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp GSCSSCEEEEEEC---------CCCSSS-CSCSS-CS--C--HHHHH----HHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hCCCCCeeEEEEC---------CCCCCC-ccccc-CC--c--CHHHH----HHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 5789999999982 332221 11111 00 1 12233 33444445444577999999998764
No 296
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=36.01 E-value=32 Score=25.60 Aligned_cols=20 Identities=20% Similarity=0.516 Sum_probs=16.2
Q ss_pred EEEeecCCCCcccHHHHHHH
Q 024331 53 AIADLGCSSGPNTLLVASEL 72 (269)
Q Consensus 53 ~IaD~GCs~G~Ns~~~~~~i 72 (269)
..-++|||.|.+.+.++..+
T Consensus 58 ~~~Cf~cg~gGd~i~fv~~~ 77 (103)
T 1d0q_A 58 IFHCFGCGAGGNAFTFLMDI 77 (103)
T ss_dssp EEEETTTCCEECHHHHHHHH
T ss_pred EEEECCCCCCCCHHHHHHHH
Confidence 45689999999999888553
No 297
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=34.23 E-value=15 Score=35.59 Aligned_cols=22 Identities=5% Similarity=0.037 Sum_probs=17.5
Q ss_pred ceEEEeecCCCCcccHHHHHHH
Q 024331 51 KVAIADLGCSSGPNTLLVASEL 72 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~i 72 (269)
..+|+|.+||||...+.+.+.+
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l 191 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYV 191 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHH
T ss_pred CCeEecCCcccchHHHHHHHHH
Confidence 4799999999998877666443
No 298
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=32.29 E-value=29 Score=31.05 Aligned_cols=20 Identities=5% Similarity=-0.114 Sum_probs=18.0
Q ss_pred ceEEEeecCCCCcccHHHHH
Q 024331 51 KVAIADLGCSSGPNTLLVAS 70 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~ 70 (269)
.-+++|.+||.|.-|..+++
T Consensus 23 gg~~VD~T~G~GGHS~~il~ 42 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILE 42 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHH
Confidence 46999999999999998885
No 299
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=30.96 E-value=23 Score=34.66 Aligned_cols=23 Identities=22% Similarity=0.261 Sum_probs=20.1
Q ss_pred CCceEEEeecCCCCcccHHHHHH
Q 024331 49 PTKVAIADLGCSSGPNTLLVASE 71 (269)
Q Consensus 49 ~~~~~IaD~GCs~G~Ns~~~~~~ 71 (269)
.+.++|+|+|-|+|.|.+..++.
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~ 87 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQA 87 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHH
T ss_pred CCceEEEEeCCchHHHHHHHHHH
Confidence 35799999999999999988854
No 300
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=28.80 E-value=81 Score=27.82 Aligned_cols=20 Identities=15% Similarity=0.255 Sum_probs=17.3
Q ss_pred CceEEEeecCCCCcccHHHH
Q 024331 50 TKVAIADLGCSSGPNTLLVA 69 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~ 69 (269)
.+-+|+++||+.|..++.+.
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma 125 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMR 125 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHH
T ss_pred CCCcEEEeecCchHHHHHHH
Confidence 46799999999999988755
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=25.44 E-value=77 Score=28.94 Aligned_cols=42 Identities=19% Similarity=0.238 Sum_probs=31.6
Q ss_pred ceEEEeecCCCCcccHHHHHH--------------HHHHHHHHHHhcCCCCCcceEEecCC
Q 024331 51 KVAIADLGCSSGPNTLLVASE--------------LIKVVNKICDKLGSQLPEFQVFLNDL 97 (269)
Q Consensus 51 ~~~IaD~GCs~G~Ns~~~~~~--------------ii~~i~~~~~~~~~~~p~~qv~~nDL 97 (269)
..+|+|+|.|.|.-|..+++. .+..+++.. ..+.++|+..|-
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-----~~~~l~ii~~D~ 114 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-----EGSPLQILKRDP 114 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-----TTSSCEEECSCT
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-----cCCCEEEEECCc
Confidence 479999999999999998864 234555543 135689999987
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=25.15 E-value=36 Score=29.09 Aligned_cols=31 Identities=16% Similarity=0.185 Sum_probs=20.5
Q ss_pred HHHHHHHhhcccCCCCceEEEeecCCCCcccHHHH
Q 024331 35 ITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVA 69 (269)
Q Consensus 35 ~l~~ai~~~~~~~~~~~~~IaD~GCs~G~Ns~~~~ 69 (269)
+++..|+.. ..+.-.|+|..||+|..++..+
T Consensus 201 l~~~~i~~~----~~~~~~vlD~f~GsGtt~~~a~ 231 (260)
T 1g60_A 201 LIERIIRAS----SNPNDLVLDCFMGSGTTAIVAK 231 (260)
T ss_dssp HHHHHHHHH----CCTTCEEEESSCTTCHHHHHHH
T ss_pred HHHHHHHHh----CCCCCEEEECCCCCCHHHHHHH
Confidence 445544433 1234689999999998876554
No 303
>2v1n_A KIN17, protein KIN homolog; nuclear protein, winged helix motif; NMR {Homo sapiens}
Probab=23.03 E-value=53 Score=25.33 Aligned_cols=72 Identities=17% Similarity=0.141 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhhhhhhccCCeEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHHccCccccc
Q 024331 182 PPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSEVTKSFLL 255 (269)
Q Consensus 182 ~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~g~~~~~~~~~~~~~~~~~l~~~l~~mv~eG~i~~~~ 255 (269)
|..+.+.|++||++||-..|+-|..+=+..---|-.-.-.+-+. ..-+..-|..|.+-..-|..+|+..-++
T Consensus 12 ~~k~i~~fS~eF~~~Fl~lLr~~~g~krV~aN~vYnEyI~dk~H--iHMNaT~W~tLT~Fvk~Lgr~G~c~V~e 83 (111)
T 2v1n_A 12 PQQFMDYFSEEFRNDFLELLRRRFGTKRVHNNIVYNEYISHREH--IHMNATQWETLTDFTKWLGREGLCKVDE 83 (111)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHTSSCEEEHHHHHHHHTTSSCC--CCGGGSSCSSHHHHHHHHTTTTSEEEEE
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhcCCcEeehhHHHHHHhccccc--ccccccccccHHHHHHHhccCCeEEEec
Confidence 44567899999999999999988765332111111111111111 1113335888999999999999865443
No 304
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=22.27 E-value=2.3e+02 Score=22.25 Aligned_cols=55 Identities=25% Similarity=0.328 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHHHHHHHHHH-hhhhhhhccC-CeEEEEecccCCCCCCChhhhHHHHHHHHHHHHHHHc
Q 024331 182 PPCVLTAYYEQFQRDFSLFL-KCRSEELVAE-GRMVLTFLGRKSQDPSSKECCYIWELLATALNNMVSE 248 (269)
Q Consensus 182 ~~~v~~ay~~Q~~~D~~~FL-~~Ra~EL~pG-G~lv~~~~g~~~~~~~~~~~~~~~~~l~~~l~~mv~e 248 (269)
|+.|.++.++.+++--..|= ......+-+| |.|++.|-|.+ .+.++.+|.+|..+
T Consensus 51 peqvrkelakeaerl~~efni~v~y~imgsgsgvm~i~f~gdd------------lea~ekalkemirq 107 (170)
T 4hhu_A 51 PEQVRKELAKEAERLKAEFNINVQYQIMGSGSGVMVIVFEGDD------------LEALEKALKEMIRQ 107 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCEEEEEEECSC------------HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhcceEEEEEEEeCCceEEEEEEecCc------------HHHHHHHHHHHHHH
Confidence 67788888887766544442 1223333333 56666654432 25788899999875
No 305
>1v8d_A Hypothetical protein (TT1679); X-RAY craytallography, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.16A {Thermus thermophilus} SCOP: c.140.1.1
Probab=22.02 E-value=1e+02 Score=26.70 Aligned_cols=51 Identities=14% Similarity=0.103 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhhcccCCCCceEEEeecCCC--------C-cccHHHHHHHHHHHHHHHHh
Q 024331 32 AKPITEEAMTKLFCSTSPTKVAIADLGCSS--------G-PNTLLVASELIKVVNKICDK 82 (269)
Q Consensus 32 ~~~~l~~ai~~~~~~~~~~~~~IaD~GCs~--------G-~Ns~~~~~~ii~~i~~~~~~ 82 (269)
.+.-+++++.++......++-.|.=+|||| | ..|+.+.+.|++.|.+...+
T Consensus 43 i~~~~~~~l~Ell~~a~l~~G~ifVvGcSTSEV~G~~IGt~ss~eva~aI~~~l~~~~~~ 102 (235)
T 1v8d_A 43 IRRAAQRAAEEFLQAFPMAPGSLFVLGGSTSEVLGERVGTRPSLEAAHAVLEGLLPPLLE 102 (235)
T ss_dssp HHHHHHHHHHHHHHHSCCCTTCEEEEEECHHHHHC----CCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEeeeHHHhCCccCCCCCcHHHHHHHHHHHHHHHHh
Confidence 344444444444443444567788899996 3 34677888888998887654
No 306
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=21.78 E-value=1.1e+02 Score=35.14 Aligned_cols=43 Identities=9% Similarity=0.135 Sum_probs=27.8
Q ss_pred CceEEEeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCCCCch
Q 024331 50 TKVAIADLGCSSGPNTLLVASELIKVVNKICDKLGSQLPEFQVFLNDLPGNDF 102 (269)
Q Consensus 50 ~~~~IaD~GCs~G~Ns~~~~~~ii~~i~~~~~~~~~~~p~~qv~~nDLP~NDF 102 (269)
..++|+++|.|+|..+..+++. +.. .+....+..+.|....-|
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~----l~~------~~~~~~~yt~td~s~~~~ 1282 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPAL----LNT------QPVMDLDYTATDRNPQAL 1282 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHH----TTT------SSSCEEEEEEECSSSSST
T ss_pred CCceEEEECCCccHHHHHHHHh----hcc------cCcccceEEEecCChHHH
Confidence 3689999999999987655522 211 111245788888876533
No 307
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=21.32 E-value=77 Score=28.04 Aligned_cols=30 Identities=23% Similarity=0.304 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhhhhhhhccCCeEEEEecc
Q 024331 191 EQFQRDFSLFLKCRSEELVAEGRMVLTFLG 220 (269)
Q Consensus 191 ~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~g 220 (269)
.+-...+..+|..=..-|+|||+|++..+-
T Consensus 218 n~el~~l~~~l~~~~~~l~~ggr~~visfh 247 (301)
T 1m6y_A 218 NRELENLKEFLKKAEDLLNPGGRIVVISFH 247 (301)
T ss_dssp HTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred hcCHHHHHHHHHHHHHhhCCCCEEEEEecC
Confidence 334578899999989999999999887753
No 308
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=21.27 E-value=34 Score=30.58 Aligned_cols=20 Identities=15% Similarity=0.130 Sum_probs=14.1
Q ss_pred HHHhhhhhhhccCCeEEEEe
Q 024331 199 LFLKCRSEELVAEGRMVLTF 218 (269)
Q Consensus 199 ~FL~~Ra~EL~pGG~lv~~~ 218 (269)
..|..=.+-|+|||.+++..
T Consensus 87 ~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 87 RWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEc
Confidence 33333357799999999865
No 309
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=21.23 E-value=1.7e+02 Score=22.09 Aligned_cols=52 Identities=12% Similarity=0.019 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhhhhhhhccCCeEEEEecccCCCCCCChhhhHH----HHHHHHHHHHHHHccCccccc
Q 024331 191 EQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYI----WELLATALNNMVSEVTKSFLL 255 (269)
Q Consensus 191 ~Q~~~D~~~FL~~Ra~EL~pGG~lv~~~~g~~~~~~~~~~~~~~----~~~l~~~l~~mv~eG~i~~~~ 255 (269)
+|-...++.-.. ..+|+||-+| |+..+-..- -..+..|++.|+.+|+|.-..
T Consensus 17 ~QI~~~i~~~I~--~G~l~pG~~L-----------Pser~La~~~gVSr~tVReAl~~L~~eGlv~~~~ 72 (134)
T 4ham_A 17 EQIVQKIKEQVV--KGVLQEGEKI-----------LSIREFASRIGVNPNTVSKAYQELERQEVIITVK 72 (134)
T ss_dssp HHHHHHHHHHHH--HTSSCTTCEE-----------CCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET
T ss_pred HHHHHHHHHHHH--cCCCCCCCCC-----------ccHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEEc
Confidence 345555655555 7889998877 111111111 157999999999999996543
No 310
>1nvp_D Transcription initiation factor IIA gamma chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1 b.56.1.1
Probab=20.99 E-value=49 Score=25.35 Aligned_cols=22 Identities=14% Similarity=0.188 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHccCccccc
Q 024331 234 IWELLATALNNMVSEVTKSFLL 255 (269)
Q Consensus 234 ~~~~l~~~l~~mv~eG~i~~~~ 255 (269)
+-..|.++|.||+.+|.|+++.
T Consensus 10 iG~aL~dtLdEli~~~~Isp~l 31 (108)
T 1nvp_D 10 LGNSLQESLDELIQSQQITPQL 31 (108)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHH
Confidence 3467999999999999999875
Done!