Query 024335
Match_columns 269
No_of_seqs 23 out of 25
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 06:28:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024335.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024335hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c4ja1 a.45.1.1 (A:86-218) Cl 45.7 11 0.00083 27.0 4.3 62 127-198 59-128 (133)
2 d2qzga1 a.29.14.1 (A:4-91) Unc 42.4 4.3 0.00031 29.9 1.3 43 173-215 4-46 (88)
3 d1lsha1 a.118.4.1 (A:285-620) 33.4 42 0.003 27.9 6.5 82 140-229 170-254 (336)
4 d2qsba1 a.29.14.1 (A:2-86) Unc 31.1 7.4 0.00054 28.5 1.0 39 177-215 6-44 (85)
5 d2fhea1 a.45.1.1 (A:81-216) Cl 30.9 27 0.002 25.2 4.3 39 127-165 58-104 (136)
6 d1okta1 a.45.1.1 (A:86-211) Pf 23.4 57 0.0042 22.3 4.8 39 127-165 64-110 (126)
7 d1jbob_ a.1.1.3 (B:) Phycocyan 22.6 18 0.0013 28.7 2.0 21 186-207 66-86 (172)
8 d1cb8a1 a.102.3.2 (A:26-335) C 21.1 49 0.0036 27.7 4.7 56 177-249 58-113 (310)
9 d1allb_ a.1.1.3 (B:) Allophyco 21.0 23 0.0016 27.6 2.3 21 186-207 65-85 (161)
10 d1pk5a_ a.123.1.1 (A:) Orphan 20.3 24 0.0018 27.4 2.4 70 142-211 135-220 (242)
No 1
>d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.71 E-value=11 Score=26.96 Aligned_cols=62 Identities=19% Similarity=0.377 Sum_probs=40.9
Q ss_pred CCcccccC---CcchhHHHHHHHhhhhcch-----hHHHHHHHHhhhhcCCccccchhhhHhhhhhccCCCCCCCCCChH
Q 024335 127 PNAFLVGG---SADFFVIEVADQLQKLKVE-----PVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRA 198 (269)
Q Consensus 127 pn~~l~gg---~aD~FV~ev~d~L~~ik~E-----~vLlhYL~~~~~lkg~eL~~tT~~rLqscLYSfTsPGgP~y~~R~ 198 (269)
.+.+++|. -||+.+-++++.+..+..+ |-|..|.+++.-.- .+|+.|-|=--...|.+++.+
T Consensus 59 ~~~~l~G~~~T~aD~~~~~~l~~~~~~~~~~l~~~P~L~~~~~rv~~~P----------~ik~yl~s~~~~~~p~~~~~a 128 (133)
T d2c4ja1 59 KQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDAFPNLKDFISRFEGLE----------KISAYMKSSRFLPRPVFSKMA 128 (133)
T ss_dssp TCSBTTBSSCCHHHHHHHHHHHHHHHHSTTTTTTCHHHHHHHHHHHHSH----------HHHHHHHSTTCCCCCSSCTTC
T ss_pred CCCeeecCCccHHHHHHHHHHHHHHHhCchhhhhCchHHHHHHHHHhCH----------HHHHHHhCcccCCCCCCCccc
Confidence 35688885 6999999999998776433 56667777765443 366666543334566666544
No 2
>d2qzga1 a.29.14.1 (A:4-91) Uncharacterized protein MMP1188 {Methanococcus maripaludis [TaxId: 39152]}
Probab=42.35 E-value=4.3 Score=29.94 Aligned_cols=43 Identities=21% Similarity=0.129 Sum_probs=31.9
Q ss_pred cchhhhHhhhhhccCCCCCCCCCChHHHHHHHHhhhhhcCCCC
Q 024335 173 MTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQ 215 (269)
Q Consensus 173 ~tT~~rLqscLYSfTsPGgP~y~~R~VR~aA~~~LD~LFP~G~ 215 (269)
+....|+|.|.+=+..=-.=.=+||-||++|-++.+.|-=.++
T Consensus 4 ~~~~e~i~~~~~~L~qI~~D~sVPRNIRr~a~~~~~~L~n~~~ 46 (88)
T d2qzga1 4 LSPADKLKNISSMLEEIVEDTTVPRNIRAAADNAKNALHNEEQ 46 (88)
T ss_dssp CCHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCTTS
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHCCCc
Confidence 4556677888777766544455899999999999998865443
No 3
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=33.40 E-value=42 Score=27.92 Aligned_cols=82 Identities=16% Similarity=0.131 Sum_probs=51.6
Q ss_pred HHHHHHHhhhh---cchhHHHHHHHHhhhhcCCccccchhhhHhhhhhccCCCCCCCCCChHHHHHHHHhhhhhcCCCCc
Q 024335 140 VIEVADQLQKL---KVEPVLLHYLSQIKVLQGMELRMTTSTRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQY 216 (269)
Q Consensus 140 V~ev~d~L~~i---k~E~vLlhYL~~~~~lkg~eL~~tT~~rLqscLYSfTsPGgP~y~~R~VR~aA~~~LD~LFP~G~~ 216 (269)
|..+.+.|.+. +.|+-.+-||.. +.-++. +.+--.|..|+-+..+.+. -.|..||.+|-.||+.+ |. ..
T Consensus 170 ~~~l~~~l~~~~~~~~~~~~~~~Lka---LGN~g~-p~~i~~l~~~l~~~~~~~~--~~~~~vR~aAi~Alr~~-~~-~~ 241 (336)
T d1lsha1 170 LQPLHDLLSQSSDRAKEEEIVLALKA---LGNAGQ-PNSIKKIQRFLPGQGKSLD--EYSTRVQAEAIMALRNI-AK-RD 241 (336)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHH---HHHHTC-GGGHHHHHTTSTTSSSCCC--CSCHHHHHHHHHTTTTG-GG-TC
T ss_pred HHHHHHHHHHhhcccchHHHHHHHHH---HhccCC-HhHHHHHHHHhcccccccc--cccHHHHHHHHHHHHHh-hh-cC
Confidence 44444444432 233444444333 322333 4577889999988876654 26788999999999986 43 56
Q ss_pred cHHHHHHHHHhhc
Q 024335 217 PRHVISLFFRLLY 229 (269)
Q Consensus 217 ~Rh~vslfFRLLh 229 (269)
|+-+.+.+.++.+
T Consensus 242 p~~v~~~l~~i~~ 254 (336)
T d1lsha1 242 PRKVQEIVLPIFL 254 (336)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHc
Confidence 8877777776643
No 4
>d2qsba1 a.29.14.1 (A:2-86) Uncharacterized protein Ta0600 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=31.12 E-value=7.4 Score=28.47 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=26.6
Q ss_pred hhHhhhhhccCCCCCCCCCChHHHHHHHHhhhhhcCCCC
Q 024335 177 TRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQ 215 (269)
Q Consensus 177 ~rLqscLYSfTsPGgP~y~~R~VR~aA~~~LD~LFP~G~ 215 (269)
.++|.|.+=+..=-.=.=+||-||++|-++.+.|-=.++
T Consensus 6 ~~l~~~~~~L~~I~~D~sVPRNIRr~a~e~~~~L~n~~~ 44 (85)
T d2qsba1 6 NLFNEVMYLLDELSQDITVPKNVRKVAQDSKAKLSQENE 44 (85)
T ss_dssp HHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTCTTS
T ss_pred HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHCCCc
Confidence 345555555544433345789999999999999865444
No 5
>d2fhea1 a.45.1.1 (A:81-216) Class alpha GST {Fasciola hepatica [TaxId: 6192]}
Probab=30.94 E-value=27 Score=25.20 Aligned_cols=39 Identities=33% Similarity=0.606 Sum_probs=28.0
Q ss_pred CCcccccC---CcchhHHHHHHHhhhhcch-----hHHHHHHHHhhh
Q 024335 127 PNAFLVGG---SADFFVIEVADQLQKLKVE-----PVLLHYLSQIKV 165 (269)
Q Consensus 127 pn~~l~gg---~aD~FV~ev~d~L~~ik~E-----~vLlhYL~~~~~ 165 (269)
.|.+++|+ -|||.+-++++.+..+..+ |-|.+|.+++.-
T Consensus 58 ~~~~lvG~~lT~AD~~~f~~l~~~~~~~~~~l~~yP~L~~~~~~v~~ 104 (136)
T d2fhea1 58 KNPYLRGTSVSHVDFMVYEALDAIRYLEPHCLDHFPNLQQFMSRIEA 104 (136)
T ss_dssp TCSBTTBSSCCHHHHHHHHHHHHHHHHCTTTTTTCHHHHHHHHHHHT
T ss_pred cCCcccCCcccchHHHHHHHHHHHHHHCCCcchhchhHHHHHHHHHh
Confidence 35688886 5999999999998776543 455566666543
No 6
>d1okta1 a.45.1.1 (A:86-211) Pf GST {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=23.40 E-value=57 Score=22.30 Aligned_cols=39 Identities=23% Similarity=0.296 Sum_probs=30.6
Q ss_pred CCcccccC---CcchhHHHHHHHhhhhcch-----hHHHHHHHHhhh
Q 024335 127 PNAFLVGG---SADFFVIEVADQLQKLKVE-----PVLLHYLSQIKV 165 (269)
Q Consensus 127 pn~~l~gg---~aD~FV~ev~d~L~~ik~E-----~vLlhYL~~~~~ 165 (269)
.+.+++|. .||+.+-++++.+..++.+ |-|..|.+++.-
T Consensus 64 ~~~flvG~~~T~AD~~~~~~l~~~~~~~~~~~~~~P~L~~~~~rv~~ 110 (126)
T d1okta1 64 DKYYFVGNNLTYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISN 110 (126)
T ss_dssp TCCCSSTTSCCHHHHHHHHHHHHHHTTSCCTTTTCHHHHHHHHHHHT
T ss_pred CCCeeecCCccHHHHHHHHHHHHHHHhCccccccChHHHHHHHHHHc
Confidence 34678885 5999999999999886655 788888888753
No 7
>d1jbob_ a.1.1.3 (B:) Phycocyanin beta subunit {Synechococcus elongatus [TaxId: 32046]}
Probab=22.59 E-value=18 Score=28.67 Aligned_cols=21 Identities=29% Similarity=0.615 Sum_probs=14.5
Q ss_pred cCCCCCCCCCChHHHHHHHHhh
Q 024335 186 FTSPGGPMYPTRAVRHAAWDAL 207 (269)
Q Consensus 186 fTsPGgP~y~~R~VR~aA~~~L 207 (269)
+|+|||+.|+||.-- |.|+=+
T Consensus 66 l~~~GG~~y~~~r~~-aC~RD~ 86 (172)
T d1jbob_ 66 LIQPGGNAYTNRRMA-ACLRDM 86 (172)
T ss_dssp GTSTTSTTCSHHHHH-HHHHHH
T ss_pred ccCCCCCCchHHHHH-HHHHHH
Confidence 589999999987432 444433
No 8
>d1cb8a1 a.102.3.2 (A:26-335) Chondroitinase AC {Pedobacter heparinus (Flavobacterium heparinum) [TaxId: 984]}
Probab=21.10 E-value=49 Score=27.71 Aligned_cols=56 Identities=13% Similarity=0.178 Sum_probs=44.6
Q ss_pred hhHhhhhhccCCCCCCCCCChHHHHHHHHhhhhhcCCCCccHHHHHHHHHhhcccCCcchhHHHHHHHHHHHH
Q 024335 177 TRLKTCLYSFTSPGGPMYPTRAVRHAAWDALDFLFPVGQYPRHVISLFFRLLYPWCWPSSCWNFIMSWLKAVL 249 (269)
Q Consensus 177 ~rLqscLYSfTsPGgP~y~~R~VR~aA~~~LD~LFP~G~~~Rh~vslfFRLLhPyywp~S~wn~~~~~ik~v~ 249 (269)
.||+.=--.++.||++-|.-..|+.+.-++||.++... ++.+.-|+|-|-+=+++-
T Consensus 58 ~rl~~mA~AY~~pgs~ly~d~~l~~~I~~al~~~~~~~-----------------~~~~NWW~~eIG~P~~l~ 113 (310)
T d1cb8a1 58 LQLETIIQAYIEKDSHYYGDDKVFDQISKAFKYWYDSD-----------------PKSRNWWHNEIATPQALG 113 (310)
T ss_dssp HHHHHHHHHHHCTTSTTTTCHHHHHHHHHHHHHHHHHC-----------------CCCSSHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcccCCHHHHHHHHHHHHHHHhCC-----------------CCCCCchHHhcccHHHHH
Confidence 57777777778999999999999999999999875422 345778999888765543
No 9
>d1allb_ a.1.1.3 (B:) Allophycocyanin beta subunit {Spirulina platensis [TaxId: 118562]}
Probab=20.98 E-value=23 Score=27.55 Aligned_cols=21 Identities=48% Similarity=0.694 Sum_probs=15.0
Q ss_pred cCCCCCCCCCChHHHHHHHHhh
Q 024335 186 FTSPGGPMYPTRAVRHAAWDAL 207 (269)
Q Consensus 186 fTsPGgP~y~~R~VR~aA~~~L 207 (269)
+|.|||..|++|.- .|.|+=+
T Consensus 65 ~~~pgG~~y~~~r~-~aC~RD~ 85 (161)
T d1allb_ 65 VTRPGGNMYTTRRY-AACIRDL 85 (161)
T ss_dssp TTSTTSTTCSHHHH-HHHHHHH
T ss_pred ccCCCCCCCChHHH-HHHHHHH
Confidence 68999999998863 3444433
No 10
>d1pk5a_ a.123.1.1 (A:) Orphan nuclear receptor NR5a2 (LRH-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.28 E-value=24 Score=27.41 Aligned_cols=70 Identities=17% Similarity=0.285 Sum_probs=42.2
Q ss_pred HHHHHhhhhcchhHHHHHHHHhhhhcC--Cccc-----cchhhhHhhhhhccCCCCCCCCCCh---------HHHHHHHH
Q 024335 142 EVADQLQKLKVEPVLLHYLSQIKVLQG--MELR-----MTTSTRLKTCLYSFTSPGGPMYPTR---------AVRHAAWD 205 (269)
Q Consensus 142 ev~d~L~~ik~E~vLlhYL~~~~~lkg--~eL~-----~tT~~rLqscLYSfTsPGgP~y~~R---------~VR~aA~~ 205 (269)
+++..++++++.+.=.-.|.++.+|.. -+|. .....|+..||+.+..-..|.-+.| ++|+.+.+
T Consensus 135 ~l~~~l~~L~ld~~E~~lLkai~Lf~pd~~gL~~~~~v~~~q~~~~~aL~~y~~~~~~~~~~Rf~~LLl~Lp~Lr~~~~~ 214 (242)
T d1pk5a_ 135 ELVVRLRSLQFDQREFVCLKFLVLFSSDVKNLENLQLVEGVQEQVNAALLDYTVCNYPQQTEKFGQLLLRLPELRAISKQ 214 (242)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHSCSCCSSCTTHHHHHHHHHHHHHHHHHHHHHHCTTSTTHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHHHHHHH
Confidence 455556666655555556667766632 1222 2234567778877755444544566 68888888
Q ss_pred hhhhhc
Q 024335 206 ALDFLF 211 (269)
Q Consensus 206 ~LD~LF 211 (269)
.++.||
T Consensus 215 ~~e~L~ 220 (242)
T d1pk5a_ 215 AEDYLY 220 (242)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887775
Done!