BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024337
(269 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/268 (78%), Positives = 240/268 (89%), Gaps = 1/268 (0%)
Query: 3 PISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT-APYLFKIQHTDVPLSYYTGILG 61
PI+GYGVAKVL+S +P+F KGDLVWGMTGWEEYS+IT LFKI DVPLSYYTGILG
Sbjct: 76 PITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIHDKDVPLSYYTGILG 135
Query: 62 MPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
MPGMTAY GF+EVCS K GE VF+SAASGAVGQLVGQFAK+LGCYVVGSAGSK+KVDLLK
Sbjct: 136 MPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLK 195
Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181
+KFGFDEAFNYKEE DL+AALKRYFP+GID+YFENVGGK LDAVL NMK+ GRIA CGMI
Sbjct: 196 SKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMI 255
Query: 182 SQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAE 241
SQYNL++ EGVHNL L++KR+RMEGF+V D+YHLYPK+LEM+IP IK GK+VYVED+A
Sbjct: 256 SQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAH 315
Query: 242 GLESAPAALIGLFSGQNVGKQVVAVAPE 269
GLESAP AL+GLFSG+N+GKQVV V+ E
Sbjct: 316 GLESAPTALVGLFSGRNIGKQVVMVSRE 343
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 406 bits (1044), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/270 (71%), Positives = 227/270 (84%), Gaps = 2/270 (0%)
Query: 2 QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLIT--APYLFKIQHTDVPLSYYTGI 59
QPI GYGV+++++S +P++ KGDL+WG+ WEEYS+IT FKIQHTDVPLSYYTG+
Sbjct: 76 QPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGL 135
Query: 60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
LGMPGMTAY GFYEVCS K GE V++SAASGAVGQLVGQ AK++GCYVVGSAGSK+KVDL
Sbjct: 136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195
Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
LK KFGFD+AFNYKEE+DL AALKR FP GID+YFENVGGK LDAVL NM + GRIA CG
Sbjct: 196 LKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCG 255
Query: 180 MISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239
MISQYNL+ EGVHNL ++ KR R++GF+V D Y Y KFLE ++PHI+EGK+ YVED+
Sbjct: 256 MISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV 315
Query: 240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
A+GLE AP AL+GLF G+NVGKQVV VA E
Sbjct: 316 ADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 217 bits (553), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 158/260 (60%), Gaps = 2/260 (0%)
Query: 8 GVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTA 67
GV KVL S++P F GD V G G ++Y + +K+ + PL Y LGM GMTA
Sbjct: 78 GVGKVLVSKHPGFQAGDYVNGALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTA 137
Query: 68 YVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD 127
Y +V K+GE V IS A+GAVG + GQ A+L GC VVG AG +K L + GFD
Sbjct: 138 YFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD 197
Query: 128 EAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLD 187
A +YK E DL A LKR P+GIDV+F+NVGG+ LD VL + + RI CG ISQYN
Sbjct: 198 GAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNK 256
Query: 188 KP-EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESA 246
+ G N + L+ R RMEG +V+D+ +P+ L+ + + EGKL ED+ EGLE+
Sbjct: 257 EAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETF 316
Query: 247 PAALIGLFSGQNVGKQVVAV 266
P L+ LFSG+N GK V+ V
Sbjct: 317 PETLLKLFSGENFGKLVLKV 336
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 203 bits (516), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/265 (44%), Positives = 162/265 (61%), Gaps = 6/265 (2%)
Query: 6 GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHT---DVPLSYYTGILGM 62
G VA+V++S+N F G +V +GW + + L K+ +PLS G +GM
Sbjct: 69 GQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGM 128
Query: 63 PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
PG+TAY G EVC K GE V +SAA+GAVG +VGQ AKL GC VVG+AGS +K+ LK
Sbjct: 129 PGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK- 187
Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
+ GFD AFNYK L ALK+ P+G D YF+NVGG+ L+ VL MK G+IA CG IS
Sbjct: 188 QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAIS 247
Query: 183 QYN-LDKPEGVHNLMYLVSKRLRMEGFIVLD-HYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
YN +D+ + ++ K+LR+EGFIV + K L ++ + EGK+ Y E +
Sbjct: 248 VYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVT 307
Query: 241 EGLESAPAALIGLFSGQNVGKQVVA 265
+G E+ PAA I + +G N+GK VV
Sbjct: 308 KGFENMPAAFIEMLNGANLGKAVVT 332
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 193 bits (491), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 153/264 (57%), Gaps = 6/264 (2%)
Query: 6 GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQH---TDVPLSYYTGILGM 62
G VAKV++S+N KG +V GW +S+ L K+ +PLS G +GM
Sbjct: 64 GQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGM 123
Query: 63 PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
PG+TAY G E+C K GE V ++AA+GAVG +VGQ AKL GC VVG+ GS +KV L+
Sbjct: 124 PGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ- 182
Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
K GFD FNYK L LK+ P+G D YF+NVGG+ + V+ MK GRIA CG IS
Sbjct: 183 KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 242
Query: 183 QYNLDKPEGVHNLMYLVS-KRLRMEGFIVLD-HYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
YN P +V + LRME F+V K L+ ++ + EGK+ Y E +
Sbjct: 243 TYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYII 302
Query: 241 EGLESAPAALIGLFSGQNVGKQVV 264
EG E+ PAA +G+ G N+GK +V
Sbjct: 303 EGFENMPAAFMGMLKGDNLGKTIV 326
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 193 bits (491), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 153/264 (57%), Gaps = 6/264 (2%)
Query: 6 GYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQH---TDVPLSYYTGILGM 62
G VAKV++S+N KG +V GW +S+ L K+ +PLS G +GM
Sbjct: 85 GQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGM 144
Query: 63 PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
PG+TAY G E+C K GE V ++AA+GAVG +VGQ AKL GC VVG+ GS +KV L+
Sbjct: 145 PGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ- 203
Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
K GFD FNYK L LK+ P+G D YF+NVGG+ + V+ MK GRIA CG IS
Sbjct: 204 KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 263
Query: 183 QYNLDKPEGVHNLMYLVS-KRLRMEGFIVLD-HYHLYPKFLEMIIPHIKEGKLVYVEDMA 240
YN P +V + LRME F+V K L+ ++ + EGK+ Y E +
Sbjct: 264 TYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYII 323
Query: 241 EGLESAPAALIGLFSGQNVGKQVV 264
EG E+ PAA +G+ G N+GK +V
Sbjct: 324 EGFENMPAAFMGMLKGDNLGKTIV 347
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 147/283 (51%), Gaps = 21/283 (7%)
Query: 2 QPISGYGVAKVLDSENPEFSKGDLVWGM-TGWEEYSLITAPYLFKI--QHTDVPLSYYTG 58
Q + G G+ + +S++ +KGD V W+ ++ L K+ Q D LSY+ G
Sbjct: 78 QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG 137
Query: 59 ILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 115
+GMPG+T+ +G E +A + + +S A+GA G + GQ LGC VVG G+ +
Sbjct: 138 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 197
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
K LL ++ GFD A NYK++ ++ L+ P G+DVYF+NVGG D V+ M I
Sbjct: 198 KCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 256
Query: 176 AACGMISQYNLDKP---------EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIP 226
CG ISQYN D P E + + + E F+VL++ + + +
Sbjct: 257 ILCGQISQYNKDVPYPPPLSPAIEAIQK-----ERNITRERFLVLNYKDKFEPGILQLSQ 311
Query: 227 HIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
KEGKL E + GLE+ AA + +G N+GKQ+V ++ E
Sbjct: 312 WFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 147/283 (51%), Gaps = 21/283 (7%)
Query: 2 QPISGYGVAKVLDSENPEFSKGDLVWGM-TGWEEYSLITAPYLFKI--QHTDVPLSYYTG 58
Q + G G+ + +S++ +KGD V W+ ++ L K+ Q D LSY+ G
Sbjct: 73 QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG 132
Query: 59 ILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 115
+GMPG+T+ +G E +A + + +S A+GA G + GQ LGC VVG G+ +
Sbjct: 133 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 192
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
K LL ++ GFD A NYK++ ++ L+ P G+DVYF+NVGG D V+ M I
Sbjct: 193 KCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 251
Query: 176 AACGMISQYNLDKP---------EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIP 226
CG ISQYN D P E + + + E F+VL++ + + +
Sbjct: 252 ILCGQISQYNKDVPYPPPLSPAIEAIQK-----ERNITRERFLVLNYKDKFEPGILQLSQ 306
Query: 227 HIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
KEGKL E + GLE+ AA + +G N+GKQ+V ++ E
Sbjct: 307 WFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 349
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 149/281 (53%), Gaps = 17/281 (6%)
Query: 2 QPISGYGVAKVLDSENPEFSKGDLV----WGMTGWEEYSLITAPYLFKI--QHTDVPLSY 55
Q G G+ V +S++ + +KGD V W W+ +++ L K+ Q D LSY
Sbjct: 74 QVADGGGIGVVEESKHQKLTKGDFVTSFYWP---WQTKAILDGNGLEKVDPQLVDGHLSY 130
Query: 56 YTGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAG 112
+ G +GMPG+T+ +G E SA + + +S A+GA G L GQ LLGC VVG G
Sbjct: 131 FLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG 190
Query: 113 SKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIR 172
+++K L ++ GFD A NYK ++ L+ P G+DVYF+NVGG +AV+ M
Sbjct: 191 TQEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNEN 249
Query: 173 GRIAACGMISQYNLDKPEGVHNLMYLVSKR----LRMEGFIVLDHYHLYPKFLEMIIPHI 228
I CG ISQY+ D P + + R + E F VL++ + + +
Sbjct: 250 SHIILCGQISQYSNDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWF 309
Query: 229 KEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
KEGKL E MA+GLE+ A + +G NVGKQ+V ++ +
Sbjct: 310 KEGKLKVKETMAKGLENMGVAFQSMMTGGNVGKQIVCISED 350
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 143/278 (51%), Gaps = 11/278 (3%)
Query: 2 QPISGYGVAKVLDSENPEFSKGDLVWGMTG-WEEYSLITAPYLFKI--QHTDVPLSYYTG 58
Q G G+ V +S++ + +KGD V W+ +++ L K+ Q D LSY+ G
Sbjct: 84 QVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLG 143
Query: 59 ILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 115
+G PG+T+ +G E SA + +S A+GA G L GQ LLGC VVG G+++
Sbjct: 144 AIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQE 203
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
K L ++ GFD A NYK ++ L+ P G+DVYF+NVGG + V+ I
Sbjct: 204 KCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNTVISQXNENSHI 262
Query: 176 AACGMISQYNLDKPEGVHNLMYLVSKR----LRMEGFIVLDHYHLYPKFLEMIIPHIKEG 231
CG ISQYN D P + + R + E F VL++ + + + KEG
Sbjct: 263 ILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEG 322
Query: 232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
KL E +A+GLE+ A +G NVGKQ+V ++ +
Sbjct: 323 KLKVKETVAKGLENXGVAFQSXXTGGNVGKQIVCISED 360
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 29/242 (11%)
Query: 47 QHTDVPLSYYTGI---------LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVG 97
++T VP S T + L + G TAY+ E+ G+ V ++AA+G GQ
Sbjct: 122 EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAM 181
Query: 98 QFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV 157
Q +K C+V+G+ S +K LK+ G D NYK E + LK+ +PEG+DV +E+V
Sbjct: 182 QLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESV 239
Query: 158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL------MYLVSKRLRMEGFIVL 211
GG D + + +GR+ G IS Y P G+ + L+ K ++GF L
Sbjct: 240 GGAMFDLAVDALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFF-L 296
Query: 212 DHY-HLYPKFLEMIIPHIKEGKLVYVEDMAE--------GLESAPAALIGLFSGQNVGKQ 262
+HY Y + ++ G LV D+ + GLES A+ ++ G+N GK
Sbjct: 297 NHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKI 356
Query: 263 VV 264
VV
Sbjct: 357 VV 358
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 29/242 (11%)
Query: 47 QHTDVPLSYYTGI---------LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVG 97
++T VP S T + L + G TAY+ E+ G+ V ++AA+G GQ
Sbjct: 130 EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAM 189
Query: 98 QFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV 157
Q +K C+V+G+ S +K LK+ G D NYK E + LK+ +PEG+DV +E+V
Sbjct: 190 QLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESV 247
Query: 158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL------MYLVSKRLRMEGFIVL 211
GG D + + +GR+ G IS Y P G+ + L+ K ++GF L
Sbjct: 248 GGAMFDLAVDALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFF-L 304
Query: 212 DHY-HLYPKFLEMIIPHIKEGKLVYVEDMAE--------GLESAPAALIGLFSGQNVGKQ 262
+HY Y + ++ G LV D+ + GLES A+ ++ G+N GK
Sbjct: 305 NHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKI 364
Query: 263 VV 264
VV
Sbjct: 365 VV 366
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 29/242 (11%)
Query: 47 QHTDVPLSYYTGI---------LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVG 97
++T VP S T + L + G TAY+ E+ G+ V ++AA+G GQ
Sbjct: 101 EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAM 160
Query: 98 QFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV 157
Q +K C+V+G+ S +K LK+ G D NYK E + LK+ +PEG+DV +E+V
Sbjct: 161 QLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESV 218
Query: 158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL------MYLVSKRLRMEGFIVL 211
GG D + + +GR+ G IS Y P G+ + L+ K ++GF L
Sbjct: 219 GGAMFDLAVDALATKGRLIVIGFISGYQ--TPTGLSPVKAGTLPAKLLKKSASVQGFF-L 275
Query: 212 DHY-HLYPKFLEMIIPHIKEGKLVYVEDMAE--------GLESAPAALIGLFSGQNVGKQ 262
+HY Y + ++ G LV D+ + GLES A+ ++ G+N GK
Sbjct: 276 NHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKI 335
Query: 263 VV 264
VV
Sbjct: 336 VV 337
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 8 GVAKVLDSENPEFSKGDLVWGMT----GWEEYSLITAPYLFKIQHTDVPLSYYTGI-LGM 62
GV + + F KGD V+ + G+ EY+L ++K+ L + G +G+
Sbjct: 97 GVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK---LDFKQGAAIGI 153
Query: 63 PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL-LK 121
P TAY K GE V + ASG VG Q A+ G ++G+AG+++ + L+
Sbjct: 154 PYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ 213
Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
N G E FN++E ++ +K+Y E GID+ E + L L + GR+ G
Sbjct: 214 N--GAHEVFNHREVNYID-KIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 4 ISGYGVAKVLDSENP---EFSKGDLVWG----MTGWEEYSLITAPYLFKI-QHTDVPLSY 55
+ G+ A V++ P +F+ G+ V + + + L A L K+ + D+ +
Sbjct: 63 VVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVH 122
Query: 56 YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115
G++ + GMTA ++ K G+ V I AA+G +G ++ +A+ LG V+G+ +++
Sbjct: 123 LAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEE 181
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
K + + K G NY + + +G+DV ++++G TL L ++ RG
Sbjct: 182 KAETAR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMC 240
Query: 176 AACGMIS 182
AA G S
Sbjct: 241 AAYGHAS 247
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TA+ + + G+ V + AA V Q AKL G V+ +AGS+DK+ K
Sbjct: 152 LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL 210
Query: 125 GFDEAFNYKEEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQ 183
G DE NY D ++R +G D ++ G + V+ GRIA G S
Sbjct: 211 GADETVNYT-HPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSG 269
Query: 184 YNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGL 243
Y EG ++ ++L + G + L+P I+ ++EGKL V L
Sbjct: 270 Y-----EGTLPFAHVFYRQLSILGSTMASKSRLFP-----ILRFVEEGKLKPVVGQVLPL 319
Query: 244 ESA 246
E+A
Sbjct: 320 EAA 322
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 55 YYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 114
Y G+L + +TA E K G+ V + AA+G VG ++ Q K+ G + + A +
Sbjct: 126 YAAGLLQV--LTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183
Query: 115 DKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGR 174
+K+ + K ++G + N +E L LK +G+D F++VG T + L +K +G
Sbjct: 184 EKLKIAK-EYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGV 242
Query: 175 IAACGMIS 182
+ G S
Sbjct: 243 FVSFGNAS 250
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TA+ + V + + G+ V I A VG Q ++ G + +AGS+ K+ + + K
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 206
Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQY 184
G FNYK+E A LK G+++ + +GG + + + + GR G++
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266
Query: 185 NLDKPEGVHNLMYLVSKRLRMEGFIVLDHYH---------LYPKFLEMIIPH 227
+++ P L SK L G ++ L F E I+PH
Sbjct: 267 DINGP--------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 310
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TA+ + V + + G+ V I A VG Q ++ G + +AGS+ K+ + + K
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 190
Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQY 184
G FNYK+E A LK G+++ + +GG + + + + GR G++
Sbjct: 191 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 250
Query: 185 NLDKPEGVHNLMYLVSKRLRMEGFIVLDHYH---------LYPKFLEMIIPH 227
+++ P L SK L G ++ L F E I+PH
Sbjct: 251 DINGP--------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 294
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 6 GYGVAKVLDSENPEFSKGDLVWGMTG----WEEYSLITAPYLFKIQHTDVPLSY-YTGIL 60
G GV + + E F GD V TG + E ++ L K+ + +S+ L
Sbjct: 65 GAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADS---VSFEQAAAL 121
Query: 61 GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
+ G+T + K GE + AA+G VG L Q+AK LG ++G+ S +K
Sbjct: 122 MLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA 181
Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKT----LDAVLPNMKIRGRIA 176
K G E +Y E L+ + V ++ VG T LD+V P +
Sbjct: 182 K-ALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGN 240
Query: 177 ACGMISQYNL 186
A G +S NL
Sbjct: 241 ASGPVSGVNL 250
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 79/207 (38%), Gaps = 22/207 (10%)
Query: 12 VLDSENPEFSKGDLVWGMTGW----------EEYSLITAPYLFKI-QHTDVPLSYYTGIL 60
V SE+P F G V +TGW E + + +L + Q D + G
Sbjct: 90 VRTSEDPRFHAGQEVL-LTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARKAMIIGTA 148
Query: 61 GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
G M + + + ++ ASG VG LG VV +G + + L
Sbjct: 149 GFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 208
Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
K+ G E A+ K+ + ID VG K L VL M G +AACG+
Sbjct: 209 KS-LGASRVLPRDEFAESRPLEKQVWAGAID----TVGDKVLAKVLAQMNYGGCVAACGL 263
Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEG 207
+ L +M + + +R++G
Sbjct: 264 AGGFTLPT-----TVMPFILRNVRLQG 285
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 100/262 (38%), Gaps = 30/262 (11%)
Query: 20 FSKGDLVWGMT---GWEEYSLITAPYLF-------KIQHTDVPLSYYTGILGMPGMTAYV 69
++ GD V G+ + EY L+ A + ++ +P +++T +
Sbjct: 107 YAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFT---------VWA 157
Query: 70 GFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA 129
++ GE V I + +G Q A+ G V +AGS K + + + G
Sbjct: 158 NLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRG 216
Query: 130 FNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKP 189
NY+ E D A +K +G+D+ + +G + + ++ G ++ + +K
Sbjct: 217 INYRSE-DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVAEK- 274
Query: 190 EGVHNLMYLVSKRLRMEGFIVL-----DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLE 244
NL + KRL + G + + L + P ++ G + V E
Sbjct: 275 ---VNLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFE 331
Query: 245 SAPAALIGLFSGQNVGKQVVAV 266
A L G +VGK + V
Sbjct: 332 DVADAHRLLEEGSHVGKVXLTV 353
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Query: 8 GVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPG 64
G+ + L + GD V W E +++KI D+ S M
Sbjct: 70 GIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPD-DMSFSEAAA-FPMNF 127
Query: 65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TAYV +EV + + G V + +A G VGQ V Q + V S K + +K+
Sbjct: 128 VTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSV 187
Query: 125 G--FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG 159
FD +Y +E +KR EG+D+ + + G
Sbjct: 188 THLFDRNADYVQE------VKRISAEGVDIVLDCLCG 218
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 62 MPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
+ G+T Y + K E AA+G VG + Q+AK LG ++G+ G+ K
Sbjct: 123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL 182
Query: 122 NKFGFDEAFNYKEEADLNAALKRYF-PEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
K G + NY+EE DL LK + + V +++VG T + L ++ RG + + G
Sbjct: 183 -KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGN 240
Query: 181 IS 182
S
Sbjct: 241 SS 242
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK---VDLLK 121
+TAY ++ + GE + + +A+G VG Q A+ LG V +A S+DK V+L +
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA-SEDKWQAVELSR 389
Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181
+++++ L A R G+DV ++ G+ DA L + GR G
Sbjct: 390 EHLASSRTCDFEQQF-LGATGGR----GVDVVLNSLAGEFADASLRMLPRGGRFLELG-- 442
Query: 182 SQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFL-EMI--IPHIKEGKLVY-VE 237
+ ++ P V + VS + D P+ + EM+ + + EG+++ +
Sbjct: 443 -KTDVRDPVEVADAHPGVS-------YQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLP 494
Query: 238 DMAEGLESAPAALIGLFSGQNVGKQVVAVAP 268
A + AP AL L ++VGK V+ + P
Sbjct: 495 VTAWDVRQAPEALRHLSQARHVGKLVLTMPP 525
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 61 GMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
G+ +TA+ EV GE V I +A+G VG AK++G + +AGS K ++L
Sbjct: 20 GVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79
Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
++ G + + + + L+ G+DV ++ G+ + + + GR G
Sbjct: 80 -SRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGK 138
Query: 181 ISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD---HYHLYP----KFLEMIIPHIKEGKL 233
Y D G+ L + F V+D + L P + L+ I+ H+ +GKL
Sbjct: 139 KDVYA-DASLGLAALA-------KSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKL 190
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 28 GMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISA 87
G+ W ++ + L ++ +D+PL LG+ TAY + + G+ V +A
Sbjct: 105 GLGTWRTEAVFSEEALIQV-PSDIPLQS-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNA 162
Query: 88 ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAA-LKRYF 146
++ VGQ V Q A LG + + + L ++ A + E +L +K +F
Sbjct: 163 SNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 222
Query: 147 PE--GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204
+ + VGGK+ +L + G M++ + K V ++ L+ K L+
Sbjct: 223 KDMPQPRLALNCVGGKSSTELLRQLARGGT-----MVTYGGMAKQPVVASVSLLIFKDLK 277
Query: 205 MEGFIV--LDHYHLYPKFLEMIIP---HIKEGKL-------VYVEDMAEGLESA 246
+ GF + H +F E+I+ I+ G+L V ++D LE++
Sbjct: 278 LRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEAS 331
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 22/234 (9%)
Query: 28 GMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISA 87
G+ W ++ + L ++ +D+PL LG+ TAY + + G+ V +A
Sbjct: 118 GLGTWRTEAVFSEEALIQV-PSDIPLQS-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNA 175
Query: 88 ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAA-LKRYF 146
++ VGQ V Q A LG + + + L ++ A + E +L +K +F
Sbjct: 176 SNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 235
Query: 147 PE--GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204
+ + VGGK+ +L + G M++ + K V ++ L+ K L+
Sbjct: 236 KDMPQPRLALNCVGGKSSTELLRQLARGGT-----MVTYGGMAKQPVVASVSLLIFKDLK 290
Query: 205 MEGFIV--LDHYHLYPKFLEMIIP---HIKEGKL-------VYVEDMAEGLESA 246
+ GF + H +F E+I+ I+ G+L V ++D LE++
Sbjct: 291 LRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEAS 344
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 42.0 bits (97), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 14/212 (6%)
Query: 66 TAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF- 124
TAY + GE V I + SG VGQ A GC V + GS +K L+ +F
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFP 1713
Query: 125 GFDEA--FNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182
DE N ++ + L+ +G+D+ ++ + L A + + GR G
Sbjct: 1714 QLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIG--- 1770
Query: 183 QYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYH-----LYPKFLEMIIPHIKEGKLVYVE 237
+++L + ++L K + G I+LD + + E++ I+EG + ++
Sbjct: 1771 KFDLSNNHALGMAVFL--KNVTFHG-ILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLK 1827
Query: 238 DMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269
AA + G+++GK V+ V E
Sbjct: 1828 CTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Query: 64 GMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123
G+TA+ E + G+ V + +G V Q AK G V+ ++ S++K+D
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQ 183
G D N EE + G D E GG L L + GRI+ G++
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 184 YNLDKPEG 191
+ + P G
Sbjct: 292 FEVSGPVG 299
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 82/210 (39%), Gaps = 34/210 (16%)
Query: 15 SENPEFSKGDLVWGMTGW----------EEYSLITAPYLFKIQHTDVPL---SYYTGILG 61
SE+P F G V +TGW E + + +L + P S I+G
Sbjct: 72 SEDPRFHAGQEVL-LTGWGVGENHWGGLAERARVKGDWLVAL-----PAGLSSRNAXIIG 125
Query: 62 MPGMTAYVGFYEVCSA----KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
G TA + + A + GE V ++ ASG VG LG V +G +
Sbjct: 126 TAGFTAXLCVXALEDAGIRPQDGEVV-VTGASGGVGSTAVALLHKLGYQVAAVSGRESTH 184
Query: 118 DLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAA 177
LK+ G + + E A+ K+ + ID VG K L VL G +AA
Sbjct: 185 GYLKS-LGANRILSRDEFAESRPLEKQLWAGAID----TVGDKVLAKVLAQXNYGGCVAA 239
Query: 178 CGMISQYNLDKPEGVHNLMYLVSKRLRMEG 207
CG+ + L + + + +R++G
Sbjct: 240 CGLAGGFALPT-----TVXPFILRNVRLQG 264
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 112/275 (40%), Gaps = 37/275 (13%)
Query: 12 VLDSENPEFSKGDLVW------GMT---GWEEYSLITAPYLFKIQHTDVPLSYYTGILGM 62
V+ S++P F +GD V G+T G+ EY+ + +L + + L I G
Sbjct: 72 VVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPK-GLTLKEAXAI-GT 129
Query: 63 PGMTAYVGFYEVCSAKHGEC-----VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
G TA + + + +HG V ++ A+G VG L G V S G +
Sbjct: 130 AGFTAALSIHRL--EEHGLTPERGPVLVTGATGGVGSLAVSXLAKRGYTVEASTGKAAEH 187
Query: 118 DLLKNKFGFDEAFNYKE--EADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRI 175
D L+ G E ++ + K+ + +D VGG+TL VL + G +
Sbjct: 188 DYLRV-LGAKEVLAREDVXAERIRPLDKQRWAAAVD----PVGGRTLATVLSRXRYGGAV 242
Query: 176 AACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY 235
A G+ + P VH + LR + +D + P L + I G L
Sbjct: 243 AVSGLTGGAEV--PTTVHPFI------LRGVSLLGIDSVYC-PXDLRLRIWERLAGDLKP 293
Query: 236 -VEDMAE--GLESAPAALIGLFSGQNVGKQVVAVA 267
+E +A+ L P AL + G+ G+ VV +A
Sbjct: 294 DLERIAQEISLAELPQALKRILRGELRGRTVVRLA 328
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 53/143 (37%), Gaps = 21/143 (14%)
Query: 63 PGMTAYVGFYEVCSA-----KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
PG+ + ++ S K G+ V I ASG +G QFA G + S K
Sbjct: 225 PGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 284
Query: 118 DLLKN--------------KFGFDEAFNYKEEADLNAALKRYFP--EGIDVYFENVGGKT 161
++ ++ KF DE +E R E ID+ FE+ G +T
Sbjct: 285 EICRSMGAEAIIDRNAEGYKFWKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRET 344
Query: 162 LDAVLPNMKIRGRIAACGMISQY 184
A + + G I C S Y
Sbjct: 345 FGASVYVTRKGGTITTCASTSGY 367
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 55/145 (37%), Gaps = 25/145 (17%)
Query: 63 PGMTAYVGFYEVCSA-----KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
PG+ + ++ S K G+ V I ASG +G QFA G + S K
Sbjct: 207 PGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 266
Query: 118 DLLKN--------------KFGFDEAFNYKEEADLNAALKRYFP----EGIDVYFENVGG 159
++ + +F DE N ++ + KR E ID+ FE+ G
Sbjct: 267 EICRAMGAEAIIDRNAEGYRFWKDE--NTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR 324
Query: 160 KTLDAVLPNMKIRGRIAACGMISQY 184
+T A + + G I C S Y
Sbjct: 325 ETFGASVFVTRKGGTITTCASTSGY 349
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 31/193 (16%)
Query: 4 ISGYGVAKVLDSENPE---FSKGDLVWGMTGW--------------EEYSLITAPYLFKI 46
I G +A + + PE F GD V+G+TG + L + P
Sbjct: 66 ILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTX 125
Query: 47 QHTDV-PLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC 105
+ V PL + +TA+ G + + G+ V I G VG + Q A G
Sbjct: 126 RQASVLPLVF---------ITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA 176
Query: 106 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAV 165
V +A D ++ +++ G +E D A + +G D+ ++ +GG LDA
Sbjct: 177 RVFATARGSD-LEYVRD-LGATPIDASREPEDYAA--EHTAGQGFDLVYDTLGGPVLDAS 232
Query: 166 LPNMKIRGRIAAC 178
+K G + +C
Sbjct: 233 FSAVKRFGHVVSC 245
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 32 WEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGA 91
W+EY +A ++ I D + + + +TA+V E + + + + ++A A
Sbjct: 99 WQEYVKTSADFVVPI--PDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSA 156
Query: 92 VGQLVGQFAKLLGCYVVG-SAGSKDKVDLLK 121
+G L Q +++L ++ + +K +LL+
Sbjct: 157 IGHLFAQLSQILNFRLIAVTRNNKHTEELLR 187
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 33.9 bits (76), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN 139
G V IS A+G +G L Q+AK +G V+G G + K +L ++ G + ++ +E D+
Sbjct: 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDIV 228
Query: 140 AAL 142
A+
Sbjct: 229 GAV 231
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TAY+ A+ GE V + AA+GA+G Q A+ +G V+ +A +K+ L
Sbjct: 112 LTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQY 184
G +EA Y E + A G+D+ E V GK ++ L + GR+ I
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIAPIPPL 223
Query: 185 NLDK 188
L +
Sbjct: 224 RLMR 227
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TAY+ A+ GE V + AA+GA+G Q A+ +G V+ +A +K+ L
Sbjct: 112 LTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
G +EA Y E + A G+D+ E V GK ++ L + GR+ G
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TAY+ A+ GE V + AA+GA+G Q A+ G V+ +A +K+ L
Sbjct: 112 LTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLA-LPLAL 169
Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
G +EA Y E + A G+D+ E V GK ++ L + GR+ G
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218
>pdb|1VDY|A Chain A, Nmr Structure Of The Hypothetical Enth-Vhs Domain
At3g16270 From Arabidopsis Thaliana
pdb|2DCP|A Chain A, Fully Automated Nmr Structure Determination Of The
Enth-Vhs Domain At3g16270 From Arabidopsis Thaliana
Length = 140
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 95 LVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD------LNAALKRYFPE 148
+V Q A L Y VG +GS+ + ++ +N F+YK D LN A++ E
Sbjct: 64 IVKQKALRLIKYAVGKSGSEFRREMQRNSVAVRNLFHYKGHPDPLKGDALNKAVRETAHE 123
Query: 149 GIDVYFENVGG 159
I F G
Sbjct: 124 TISAIFSEENG 134
>pdb|4A7P|A Chain A, Se-Met Derivatized Ugdg, Udp-Glucose Dehydrogenase From
Sphingomonas Elodea
pdb|4A7P|B Chain B, Se-Met Derivatized Ugdg, Udp-Glucose Dehydrogenase From
Sphingomonas Elodea
Length = 446
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 218 PKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGL 253
P ++ ++K G+L + D+AEG++ A A I +
Sbjct: 57 PGLDALVASNVKAGRLSFTTDLAEGVKDADAVFIAV 92
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Query: 66 TAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG 125
T Y + + GE V + A+G +G Q AK +G V+ + +K+ G
Sbjct: 146 TMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VG 204
Query: 126 FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACG 179
D EE A + G+D+ + +GG D + + GR+ G
Sbjct: 205 ADIVLPL-EEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVG 257
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 43/124 (34%), Gaps = 18/124 (14%)
Query: 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE--- 134
K G+ V I ASG +G QF K G V S K ++ G D N E
Sbjct: 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-ALGCDLVINRAELGI 277
Query: 135 EADLNAALKRYFPEGI--------------DVYFENVGGKTLDAVLPNMKIRGRIAACGM 180
D+ +R G D+ FE+ G T + + G + CG
Sbjct: 278 TDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGS 337
Query: 181 ISQY 184
S Y
Sbjct: 338 SSGY 341
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.140 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,557,307
Number of Sequences: 62578
Number of extensions: 375262
Number of successful extensions: 1067
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 981
Number of HSP's gapped (non-prelim): 53
length of query: 269
length of database: 14,973,337
effective HSP length: 97
effective length of query: 172
effective length of database: 8,903,271
effective search space: 1531362612
effective search space used: 1531362612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)