Query 024337
Match_columns 269
No_of_seqs 130 out of 2020
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 03:49:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024337.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024337hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 4E-44 8.7E-49 288.3 24.9 244 5-267 64-338 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 1.5E-43 3.2E-48 291.5 26.1 257 2-266 61-326 (326)
3 KOG1197 Predicted quinone oxid 100.0 1.3E-42 2.9E-47 262.1 20.7 259 2-269 68-333 (336)
4 PLN03154 putative allyl alcoho 100.0 3E-41 6.5E-46 282.6 28.0 265 4-269 80-348 (348)
5 COG2130 Putative NADP-dependen 100.0 1.3E-39 2.7E-44 252.5 26.4 264 4-268 75-340 (340)
6 cd08295 double_bond_reductase_ 100.0 1.3E-38 2.8E-43 266.4 28.5 263 4-266 75-338 (338)
7 KOG0024 Sorbitol dehydrogenase 100.0 1.4E-38 2.9E-43 249.2 22.4 247 5-268 68-354 (354)
8 KOG0023 Alcohol dehydrogenase, 100.0 2.4E-38 5.1E-43 247.3 22.3 247 4-268 71-356 (360)
9 KOG1196 Predicted NAD-dependen 100.0 5.7E-37 1.2E-41 237.0 24.2 268 2-269 73-343 (343)
10 cd08281 liver_ADH_like1 Zinc-d 100.0 9E-37 1.9E-41 258.1 26.7 250 4-264 67-371 (371)
11 cd08293 PTGR2 Prostaglandin re 100.0 2.1E-36 4.7E-41 253.8 28.0 262 3-266 73-345 (345)
12 cd08239 THR_DH_like L-threonin 100.0 4.6E-36 9.9E-41 251.2 26.4 244 4-266 60-339 (339)
13 cd08294 leukotriene_B4_DH_like 100.0 8.3E-36 1.8E-40 248.7 27.9 260 4-266 62-329 (329)
14 COG1062 AdhC Zn-dependent alco 100.0 2E-36 4.4E-41 239.0 21.6 248 4-262 61-363 (366)
15 TIGR02825 B4_12hDH leukotriene 100.0 1.6E-35 3.4E-40 246.5 27.3 257 4-265 63-325 (325)
16 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.7E-35 3.8E-40 249.2 26.6 250 4-265 60-357 (358)
17 cd08291 ETR_like_1 2-enoyl thi 100.0 2.3E-35 4.9E-40 245.5 25.9 251 4-265 66-324 (324)
18 PLN02827 Alcohol dehydrogenase 100.0 5.7E-35 1.2E-39 247.2 26.9 251 4-267 69-377 (378)
19 PLN02586 probable cinnamyl alc 100.0 6.3E-35 1.4E-39 245.5 25.7 243 4-267 72-354 (360)
20 PRK09880 L-idonate 5-dehydroge 100.0 5.5E-35 1.2E-39 244.8 25.2 240 4-266 65-343 (343)
21 PRK10309 galactitol-1-phosphat 100.0 1E-34 2.3E-39 243.7 25.5 252 4-266 59-346 (347)
22 PLN02740 Alcohol dehydrogenase 100.0 1.9E-34 4.1E-39 244.6 26.5 250 4-265 71-380 (381)
23 PLN02178 cinnamyl-alcohol dehy 100.0 2.8E-34 6E-39 242.4 26.5 243 4-267 66-349 (375)
24 TIGR02818 adh_III_F_hyde S-(hy 100.0 3.8E-34 8.3E-39 241.6 27.0 251 4-266 61-368 (368)
25 KOG1198 Zinc-binding oxidoredu 100.0 8.2E-35 1.8E-39 239.7 22.0 258 4-267 71-346 (347)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 5.7E-34 1.2E-38 237.0 26.3 236 3-264 61-328 (329)
27 cd08301 alcohol_DH_plants Plan 100.0 7.8E-34 1.7E-38 240.2 27.2 249 4-264 62-368 (369)
28 cd08300 alcohol_DH_class_III c 100.0 7.6E-34 1.6E-38 240.0 27.0 250 4-265 62-368 (368)
29 cd08292 ETR_like_2 2-enoyl thi 100.0 8.3E-34 1.8E-38 236.1 25.7 252 4-265 64-324 (324)
30 KOG0025 Zn2+-binding dehydroge 100.0 5.3E-34 1.1E-38 219.3 22.0 255 4-266 83-352 (354)
31 TIGR03201 dearomat_had 6-hydro 100.0 1.2E-33 2.6E-38 237.3 25.6 246 4-266 59-349 (349)
32 KOG0022 Alcohol dehydrogenase, 100.0 8.5E-34 1.8E-38 220.9 22.6 250 4-265 67-374 (375)
33 PLN02514 cinnamyl-alcohol dehy 100.0 1.8E-33 3.9E-38 236.6 26.4 245 4-268 69-352 (357)
34 cd08233 butanediol_DH_like (2R 100.0 4E-33 8.7E-38 234.5 25.7 243 4-264 70-350 (351)
35 cd08277 liver_alcohol_DH_like 100.0 5.6E-33 1.2E-37 234.5 26.5 248 4-264 61-364 (365)
36 cd08238 sorbose_phosphate_red 100.0 1.7E-32 3.7E-37 234.6 26.0 250 4-267 68-369 (410)
37 cd08231 MDR_TM0436_like Hypoth 100.0 1.8E-32 3.9E-37 231.4 25.7 248 4-266 60-361 (361)
38 cd08244 MDR_enoyl_red Possible 100.0 6E-32 1.3E-36 224.9 27.4 253 4-266 65-324 (324)
39 cd08246 crotonyl_coA_red croto 100.0 4.2E-32 9.1E-37 231.5 26.8 249 4-265 87-392 (393)
40 cd05282 ETR_like 2-enoyl thioe 100.0 7.7E-32 1.7E-36 224.2 25.7 253 4-265 62-323 (323)
41 cd08274 MDR9 Medium chain dehy 100.0 9.1E-32 2E-36 226.2 25.9 245 4-266 83-350 (350)
42 cd08296 CAD_like Cinnamyl alco 100.0 1.3E-31 2.9E-36 223.6 26.4 242 4-265 60-333 (333)
43 PTZ00354 alcohol dehydrogenase 100.0 1.4E-31 3E-36 223.6 26.3 257 4-268 64-330 (334)
44 cd08290 ETR 2-enoyl thioester 100.0 9.6E-32 2.1E-36 225.3 25.0 255 4-266 69-341 (341)
45 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.8E-31 3.9E-36 223.2 26.1 248 4-265 64-334 (336)
46 cd08230 glucose_DH Glucose deh 100.0 7.4E-32 1.6E-36 227.0 23.7 240 4-266 63-355 (355)
47 TIGR02819 fdhA_non_GSH formald 100.0 1.5E-31 3.3E-36 226.8 25.7 252 4-267 67-391 (393)
48 COG1063 Tdh Threonine dehydrog 100.0 1.7E-31 3.7E-36 222.8 25.2 249 4-266 61-350 (350)
49 TIGR01751 crot-CoA-red crotony 100.0 2.8E-31 6.2E-36 226.5 27.2 252 4-268 83-389 (398)
50 TIGR03366 HpnZ_proposed putati 100.0 5.7E-32 1.2E-36 220.3 21.9 227 3-246 3-280 (280)
51 cd05288 PGDH Prostaglandin deh 100.0 2.1E-31 4.6E-36 222.1 25.7 257 4-264 70-329 (329)
52 cd05284 arabinose_DH_like D-ar 100.0 3.1E-31 6.7E-36 222.1 25.8 244 4-266 63-340 (340)
53 cd08297 CAD3 Cinnamyl alcohol 100.0 7.4E-31 1.6E-35 219.9 27.8 247 4-266 62-341 (341)
54 cd08263 Zn_ADH10 Alcohol dehyd 100.0 6.3E-31 1.4E-35 222.4 26.1 249 4-265 59-367 (367)
55 cd08237 ribitol-5-phosphate_DH 100.0 2.4E-31 5.2E-36 222.4 22.4 233 4-267 64-340 (341)
56 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.4E-31 3E-36 220.8 20.2 229 4-265 64-308 (308)
57 cd08250 Mgc45594_like Mgc45594 100.0 1.4E-30 3.1E-35 217.1 26.6 256 4-265 66-329 (329)
58 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.7E-30 3.6E-35 218.1 26.5 249 4-265 60-344 (345)
59 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.6E-30 3.4E-35 218.7 25.9 245 5-265 73-349 (350)
60 cd08278 benzyl_alcohol_DH Benz 100.0 1.6E-30 3.5E-35 219.5 25.8 250 4-265 61-365 (365)
61 cd08270 MDR4 Medium chain dehy 100.0 2.2E-30 4.7E-35 213.8 25.6 244 4-266 57-305 (305)
62 cd08285 NADP_ADH NADP(H)-depen 100.0 2.3E-30 5.1E-35 217.7 25.8 249 4-266 59-351 (351)
63 PRK10754 quinone oxidoreductas 100.0 3.7E-30 8E-35 214.5 26.0 254 4-266 63-327 (327)
64 cd05286 QOR2 Quinone oxidoredu 100.0 7.5E-30 1.6E-34 211.5 26.9 254 4-266 60-320 (320)
65 cd08243 quinone_oxidoreductase 100.0 3.9E-30 8.5E-35 213.6 25.1 247 4-264 62-319 (320)
66 cd08261 Zn_ADH7 Alcohol dehydr 100.0 8.4E-30 1.8E-34 213.2 26.8 244 4-266 59-337 (337)
67 cd05278 FDH_like Formaldehyde 100.0 4.9E-30 1.1E-34 215.5 25.0 247 4-266 60-347 (347)
68 cd08283 FDH_like_1 Glutathione 100.0 1E-29 2.2E-34 216.1 26.7 248 4-266 60-386 (386)
69 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.1E-29 2.4E-34 212.6 26.5 245 4-266 62-338 (338)
70 cd08235 iditol_2_DH_like L-idi 100.0 1E-29 2.2E-34 213.2 26.0 244 4-264 59-342 (343)
71 PRK09422 ethanol-active dehydr 100.0 1.3E-29 2.9E-34 212.1 26.3 245 4-267 59-337 (338)
72 cd08251 polyketide_synthase po 100.0 8.2E-30 1.8E-34 209.9 24.2 251 4-264 43-303 (303)
73 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.6E-29 3.5E-34 210.5 25.7 250 4-266 63-325 (325)
74 cd08284 FDH_like_2 Glutathione 100.0 1.7E-29 3.7E-34 211.9 25.9 244 4-265 59-343 (344)
75 cd05279 Zn_ADH1 Liver alcohol 100.0 2.3E-29 4.9E-34 212.5 26.2 249 4-264 59-364 (365)
76 PRK13771 putative alcohol dehy 100.0 1.5E-29 3.3E-34 211.4 24.9 244 4-266 60-333 (334)
77 cd08279 Zn_ADH_class_III Class 100.0 3E-29 6.5E-34 211.8 26.6 249 4-263 59-362 (363)
78 cd08289 MDR_yhfp_like Yhfp put 100.0 1.7E-29 3.8E-34 210.4 24.8 251 4-266 63-326 (326)
79 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.9E-29 6.3E-34 207.7 25.8 247 4-264 57-311 (312)
80 cd08249 enoyl_reductase_like e 100.0 1.3E-29 2.8E-34 212.1 23.6 246 4-266 60-339 (339)
81 cd08253 zeta_crystallin Zeta-c 100.0 3.8E-29 8.3E-34 207.8 26.2 253 4-266 63-325 (325)
82 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2.6E-29 5.5E-34 210.6 25.2 244 4-265 69-341 (341)
83 cd08236 sugar_DH NAD(P)-depend 100.0 2.8E-29 6.1E-34 210.5 25.5 250 4-264 58-343 (343)
84 PRK10083 putative oxidoreducta 100.0 3.4E-29 7.5E-34 209.7 25.7 245 4-268 59-339 (339)
85 cd05285 sorbitol_DH Sorbitol d 100.0 2.8E-29 6.1E-34 210.5 25.0 242 4-264 60-341 (343)
86 cd08286 FDH_like_ADH2 formalde 100.0 4.8E-29 1E-33 209.3 26.2 246 4-266 60-345 (345)
87 cd05276 p53_inducible_oxidored 100.0 3.3E-29 7.1E-34 207.9 24.6 252 4-264 63-323 (323)
88 cd08266 Zn_ADH_like1 Alcohol d 100.0 9E-29 2E-33 207.1 27.2 249 4-266 63-342 (342)
89 TIGR02823 oxido_YhdH putative 100.0 7.8E-29 1.7E-33 206.2 26.4 248 5-266 63-323 (323)
90 smart00829 PKS_ER Enoylreducta 100.0 3.2E-29 7E-34 204.7 23.7 252 4-264 29-288 (288)
91 cd05283 CAD1 Cinnamyl alcohol 100.0 4.3E-29 9.3E-34 208.8 24.9 240 4-265 59-337 (337)
92 cd08299 alcohol_DH_class_I_II_ 100.0 8.2E-29 1.8E-33 209.5 26.8 251 4-266 66-373 (373)
93 cd08276 MDR7 Medium chain dehy 100.0 8.8E-29 1.9E-33 206.9 26.4 248 4-266 63-336 (336)
94 cd08265 Zn_ADH3 Alcohol dehydr 100.0 7.3E-29 1.6E-33 210.8 25.8 246 4-264 93-383 (384)
95 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.2E-28 2.6E-33 205.8 25.9 243 4-265 60-332 (332)
96 cd05195 enoyl_red enoyl reduct 100.0 6.8E-29 1.5E-33 203.1 23.8 252 4-264 33-293 (293)
97 cd08268 MDR2 Medium chain dehy 100.0 2.2E-28 4.7E-33 203.6 26.7 254 4-266 63-328 (328)
98 PRK05396 tdh L-threonine 3-deh 100.0 1.2E-28 2.7E-33 206.5 25.4 245 4-267 63-341 (341)
99 TIGR02824 quinone_pig3 putativ 100.0 1.6E-28 3.6E-33 204.0 25.7 254 4-266 63-325 (325)
100 cd08282 PFDH_like Pseudomonas 100.0 1.8E-28 3.8E-33 207.8 26.2 250 4-265 59-374 (375)
101 TIGR00692 tdh L-threonine 3-de 100.0 1.5E-28 3.3E-33 205.8 25.5 245 4-266 61-340 (340)
102 cd08252 AL_MDR Arginate lyase 100.0 2.1E-28 4.5E-33 204.7 26.1 249 4-265 65-336 (336)
103 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.5E-28 3.2E-33 206.7 24.8 242 4-264 68-350 (350)
104 cd08232 idonate-5-DH L-idonate 100.0 2.9E-28 6.3E-33 204.1 25.8 240 4-266 59-339 (339)
105 KOG1202 Animal-type fatty acid 100.0 1.3E-29 2.8E-34 224.6 17.1 242 20-269 1492-1744(2376)
106 cd05281 TDH Threonine dehydrog 100.0 3.1E-28 6.7E-33 204.0 24.7 244 4-266 63-341 (341)
107 cd08287 FDH_like_ADH3 formalde 100.0 4.6E-28 9.9E-33 203.4 25.8 246 4-266 59-345 (345)
108 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.9E-28 6.3E-33 202.9 24.0 235 4-262 60-324 (325)
109 cd08247 AST1_like AST1 is a cy 100.0 4.9E-28 1.1E-32 203.7 25.0 258 4-266 64-352 (352)
110 cd08272 MDR6 Medium chain dehy 100.0 1.5E-27 3.2E-32 198.5 25.6 248 4-266 63-326 (326)
111 cd08241 QOR1 Quinone oxidoredu 100.0 1.3E-27 2.8E-32 198.4 25.1 253 4-265 63-323 (323)
112 cd08273 MDR8 Medium chain dehy 100.0 6.7E-28 1.5E-32 201.2 23.4 251 4-264 63-330 (331)
113 cd08234 threonine_DH_like L-th 100.0 1.9E-27 4E-32 198.8 25.7 242 4-264 58-333 (334)
114 PLN02702 L-idonate 5-dehydroge 100.0 2.1E-27 4.6E-32 200.6 26.0 243 4-265 79-363 (364)
115 cd08255 2-desacetyl-2-hydroxye 100.0 1.1E-27 2.4E-32 195.1 22.4 241 4-264 26-277 (277)
116 cd08288 MDR_yhdh Yhdh putative 100.0 4.5E-27 9.7E-32 195.7 25.8 249 4-266 63-324 (324)
117 cd08298 CAD2 Cinnamyl alcohol 100.0 4.3E-27 9.3E-32 196.2 25.1 234 4-264 64-329 (329)
118 cd08245 CAD Cinnamyl alcohol d 100.0 3.9E-27 8.4E-32 196.6 24.7 240 4-264 59-330 (330)
119 cd08271 MDR5 Medium chain dehy 100.0 9E-27 1.9E-31 193.8 26.7 249 4-266 62-325 (325)
120 cd08248 RTN4I1 Human Reticulon 100.0 1.6E-27 3.5E-32 200.4 22.3 253 5-264 80-349 (350)
121 cd08275 MDR3 Medium chain dehy 100.0 1.1E-26 2.4E-31 194.2 26.2 258 4-266 62-337 (337)
122 cd08242 MDR_like Medium chain 100.0 7.8E-27 1.7E-31 193.9 23.3 231 3-266 55-319 (319)
123 cd08267 MDR1 Medium chain dehy 100.0 1.3E-26 2.9E-31 192.3 23.3 245 4-264 64-319 (319)
124 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.9E-26 6.2E-31 189.2 23.5 211 4-231 61-306 (306)
125 cd05289 MDR_like_2 alcohol deh 100.0 3.7E-26 8.1E-31 188.6 23.8 238 4-264 65-309 (309)
126 cd05188 MDR Medium chain reduc 99.9 2E-25 4.2E-30 181.0 22.7 198 4-212 35-260 (271)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 5.5E-19 1.2E-23 127.4 14.2 127 91-229 1-129 (130)
128 PF13602 ADH_zinc_N_2: Zinc-bi 99.6 6E-16 1.3E-20 111.0 8.2 122 124-264 1-127 (127)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 6.8E-13 1.5E-17 111.8 14.9 177 65-267 186-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 9.2E-12 2E-16 107.6 15.6 149 77-235 162-334 (509)
131 PRK11873 arsM arsenite S-adeno 98.7 1.3E-07 2.9E-12 76.7 10.9 169 75-265 73-260 (272)
132 PF11017 DUF2855: Protein of u 98.7 1.2E-06 2.6E-11 71.0 14.5 171 3-182 32-234 (314)
133 TIGR00561 pntA NAD(P) transhyd 98.7 2.5E-07 5.4E-12 80.2 11.3 104 78-183 162-288 (511)
134 COG4221 Short-chain alcohol de 98.7 2.3E-07 5.1E-12 71.8 9.5 81 79-159 5-91 (246)
135 PF08240 ADH_N: Alcohol dehydr 98.5 1.1E-07 2.3E-12 66.1 4.0 44 3-46 36-109 (109)
136 TIGR00518 alaDH alanine dehydr 98.5 5.5E-06 1.2E-10 70.0 14.2 99 80-184 167-272 (370)
137 PRK05476 S-adenosyl-L-homocyst 98.5 2.2E-06 4.7E-11 73.0 11.6 104 65-182 196-302 (425)
138 TIGR00936 ahcY adenosylhomocys 98.4 4.3E-06 9.4E-11 70.8 12.2 102 66-181 180-284 (406)
139 PRK08324 short chain dehydroge 98.4 2.7E-06 5.9E-11 77.9 11.8 140 30-182 385-560 (681)
140 PLN02494 adenosylhomocysteinas 98.4 4.5E-06 9.7E-11 71.4 11.8 103 65-181 238-343 (477)
141 COG0300 DltE Short-chain dehyd 98.4 2.3E-06 4.9E-11 68.1 8.8 81 78-159 4-94 (265)
142 PRK08306 dipicolinate synthase 98.3 9.4E-06 2E-10 66.5 11.5 93 79-182 151-244 (296)
143 COG3967 DltE Short-chain dehyd 98.3 4.9E-06 1.1E-10 62.6 8.7 80 79-159 4-88 (245)
144 PRK00517 prmA ribosomal protei 98.3 7.7E-06 1.7E-10 65.5 10.5 142 16-180 63-214 (250)
145 PRK05786 fabG 3-ketoacyl-(acyl 98.3 1.3E-05 2.8E-10 63.6 11.0 104 79-182 4-138 (238)
146 PF01488 Shikimate_DH: Shikima 98.3 1.4E-05 3E-10 57.7 10.0 93 79-180 11-110 (135)
147 PRK05693 short chain dehydroge 98.3 2E-05 4.3E-10 64.1 12.1 78 81-159 2-82 (274)
148 PRK12742 oxidoreductase; Provi 98.2 2.8E-05 6.1E-10 61.6 12.5 102 79-182 5-134 (237)
149 PRK06182 short chain dehydroge 98.2 2.9E-05 6.2E-10 63.1 12.1 80 79-159 2-84 (273)
150 cd05213 NAD_bind_Glutamyl_tRNA 98.2 1.9E-05 4.1E-10 65.3 10.8 108 42-162 140-251 (311)
151 PRK08265 short chain dehydroge 98.1 4.9E-05 1.1E-09 61.3 12.0 81 79-159 5-90 (261)
152 PRK05993 short chain dehydroge 98.1 4.1E-05 8.9E-10 62.4 10.9 79 79-158 3-85 (277)
153 PF12847 Methyltransf_18: Meth 98.1 1.7E-05 3.6E-10 55.1 7.2 95 79-178 1-110 (112)
154 KOG1205 Predicted dehydrogenas 98.1 5.5E-05 1.2E-09 60.8 10.6 105 79-183 11-153 (282)
155 PRK08339 short chain dehydroge 98.1 0.0001 2.2E-09 59.6 12.5 105 79-183 7-147 (263)
156 PRK05872 short chain dehydroge 98.1 3.6E-05 7.7E-10 63.4 9.8 81 79-159 8-95 (296)
157 PTZ00075 Adenosylhomocysteinas 98.0 7.4E-05 1.6E-09 64.3 11.3 91 77-181 251-343 (476)
158 TIGR00406 prmA ribosomal prote 98.0 2.9E-05 6.3E-10 63.5 8.4 96 77-180 157-260 (288)
159 PRK06057 short chain dehydroge 98.0 6.7E-05 1.5E-09 60.3 10.1 81 79-159 6-89 (255)
160 PRK07109 short chain dehydroge 98.0 9.6E-05 2.1E-09 61.9 11.3 105 79-183 7-147 (334)
161 PRK06198 short chain dehydroge 98.0 0.0009 2E-08 53.8 16.2 81 79-159 5-94 (260)
162 PRK06200 2,3-dihydroxy-2,3-dih 98.0 7.3E-05 1.6E-09 60.3 9.8 80 79-158 5-89 (263)
163 PRK06139 short chain dehydroge 98.0 5.7E-05 1.2E-09 63.1 9.2 81 79-159 6-94 (330)
164 TIGR02853 spore_dpaA dipicolin 98.0 0.00018 3.9E-09 58.7 11.8 92 79-181 150-242 (287)
165 PRK06484 short chain dehydroge 97.9 0.00014 3E-09 64.8 12.0 105 79-183 268-404 (520)
166 PRK00045 hemA glutamyl-tRNA re 97.9 9.7E-05 2.1E-09 63.8 10.5 91 59-159 158-252 (423)
167 PRK07060 short chain dehydroge 97.9 0.00015 3.2E-09 57.8 10.8 79 79-159 8-87 (245)
168 TIGR03325 BphB_TodD cis-2,3-di 97.9 9.1E-05 2E-09 59.8 9.7 80 79-158 4-88 (262)
169 PRK07825 short chain dehydroge 97.9 0.0001 2.2E-09 59.9 9.7 80 80-159 5-88 (273)
170 PLN03209 translocon at the inn 97.9 0.00025 5.5E-09 62.6 12.5 104 74-182 74-210 (576)
171 PRK08261 fabG 3-ketoacyl-(acyl 97.9 0.00027 5.9E-09 61.7 12.7 80 79-159 209-294 (450)
172 COG2518 Pcm Protein-L-isoaspar 97.9 0.00019 4E-09 54.9 9.9 110 60-180 55-170 (209)
173 KOG1210 Predicted 3-ketosphing 97.9 0.00022 4.8E-09 57.4 10.7 107 76-182 29-174 (331)
174 PLN02780 ketoreductase/ oxidor 97.9 0.00011 2.4E-09 61.1 9.6 80 79-159 52-142 (320)
175 PRK12939 short chain dehydroge 97.9 0.00022 4.8E-09 56.9 11.1 81 79-159 6-94 (250)
176 PRK07576 short chain dehydroge 97.9 8.5E-05 1.8E-09 60.0 8.6 80 79-158 8-95 (264)
177 PRK08017 oxidoreductase; Provi 97.9 0.00022 4.8E-09 57.2 10.8 78 81-159 3-84 (256)
178 PRK07806 short chain dehydroge 97.9 0.00023 4.9E-09 56.9 10.8 102 79-180 5-135 (248)
179 PF13460 NAD_binding_10: NADH( 97.9 0.00016 3.4E-09 55.0 9.4 92 83-182 1-100 (183)
180 PRK07062 short chain dehydroge 97.9 0.00013 2.8E-09 58.9 9.4 81 79-159 7-97 (265)
181 PRK12829 short chain dehydroge 97.9 0.00016 3.5E-09 58.2 9.9 83 77-159 8-96 (264)
182 PRK05867 short chain dehydroge 97.8 0.00012 2.6E-09 58.7 8.9 81 79-159 8-96 (253)
183 PRK07063 short chain dehydroge 97.8 0.00013 2.8E-09 58.7 9.0 81 79-159 6-96 (260)
184 PRK06196 oxidoreductase; Provi 97.8 0.00018 3.9E-09 59.8 10.0 80 79-158 25-108 (315)
185 PRK08177 short chain dehydroge 97.8 0.00015 3.3E-09 57.0 9.1 78 81-159 2-81 (225)
186 PRK05854 short chain dehydroge 97.8 0.00018 4E-09 59.7 9.9 81 79-159 13-103 (313)
187 PRK06500 short chain dehydroge 97.8 0.00019 4.1E-09 57.3 9.7 81 79-159 5-90 (249)
188 PRK05866 short chain dehydroge 97.8 0.00014 3E-09 59.8 8.9 81 79-159 39-127 (293)
189 PRK00377 cbiT cobalt-precorrin 97.8 0.00047 1E-08 53.2 11.4 99 74-177 35-143 (198)
190 PRK12771 putative glutamate sy 97.8 7.4E-05 1.6E-09 67.1 7.9 77 76-159 133-232 (564)
191 PRK06949 short chain dehydroge 97.8 0.00017 3.7E-09 57.9 9.2 82 78-159 7-96 (258)
192 PRK05884 short chain dehydroge 97.8 0.00024 5.2E-09 55.9 9.7 76 82-158 2-78 (223)
193 PRK07890 short chain dehydroge 97.8 0.00014 3E-09 58.4 8.6 81 79-159 4-92 (258)
194 PRK07814 short chain dehydroge 97.8 0.00018 4E-09 58.0 9.3 81 79-159 9-97 (263)
195 PRK07478 short chain dehydroge 97.8 0.00018 3.9E-09 57.7 9.0 81 79-159 5-93 (254)
196 PRK07231 fabG 3-ketoacyl-(acyl 97.8 0.00017 3.6E-09 57.7 8.7 81 79-159 4-91 (251)
197 PF02353 CMAS: Mycolic acid cy 97.8 7.4E-05 1.6E-09 60.4 6.5 102 71-180 54-167 (273)
198 PRK11705 cyclopropane fatty ac 97.8 0.00028 6E-09 60.1 10.1 107 65-180 153-268 (383)
199 PRK07832 short chain dehydroge 97.8 0.00064 1.4E-08 55.2 11.9 78 82-159 2-88 (272)
200 PRK06180 short chain dehydroge 97.8 0.00025 5.4E-09 57.7 9.6 81 79-159 3-88 (277)
201 KOG1209 1-Acyl dihydroxyaceton 97.8 0.00026 5.6E-09 53.8 8.6 105 79-183 6-142 (289)
202 PRK09186 flagellin modificatio 97.8 0.00024 5.2E-09 57.0 9.3 80 79-158 3-92 (256)
203 PRK07831 short chain dehydroge 97.7 0.00031 6.6E-09 56.7 9.8 83 77-159 14-107 (262)
204 PRK07523 gluconate 5-dehydroge 97.7 0.00027 5.8E-09 56.7 9.3 81 79-159 9-97 (255)
205 PRK06841 short chain dehydroge 97.7 0.00028 6.1E-09 56.6 9.4 80 79-159 14-99 (255)
206 PRK07904 short chain dehydroge 97.7 0.00033 7.3E-09 56.2 9.6 84 76-159 4-97 (253)
207 PRK08267 short chain dehydroge 97.7 0.00041 8.8E-09 55.9 10.0 79 81-159 2-87 (260)
208 PRK07453 protochlorophyllide o 97.7 0.00035 7.7E-09 58.2 9.9 80 79-158 5-92 (322)
209 PRK07326 short chain dehydroge 97.7 0.00027 5.9E-09 56.0 8.9 81 79-159 5-92 (237)
210 COG2242 CobL Precorrin-6B meth 97.7 0.00069 1.5E-08 50.7 10.2 98 75-180 30-136 (187)
211 PRK06953 short chain dehydroge 97.7 0.00047 1E-08 54.1 10.1 78 81-159 2-80 (222)
212 PRK08703 short chain dehydroge 97.7 0.0005 1.1E-08 54.6 10.3 81 79-159 5-97 (239)
213 PRK07024 short chain dehydroge 97.7 0.00043 9.4E-09 55.6 10.0 80 80-159 2-88 (257)
214 COG2230 Cfa Cyclopropane fatty 97.7 0.00013 2.8E-09 58.5 6.7 110 65-182 58-179 (283)
215 cd01078 NAD_bind_H4MPT_DH NADP 97.7 0.0012 2.6E-08 50.8 12.0 78 79-161 27-109 (194)
216 PF02826 2-Hacid_dh_C: D-isome 97.7 0.00044 9.6E-09 52.4 9.4 89 78-180 34-128 (178)
217 PRK06484 short chain dehydroge 97.7 0.0003 6.4E-09 62.7 9.8 81 79-159 4-89 (520)
218 PRK06194 hypothetical protein; 97.7 0.00028 6E-09 57.7 9.0 80 80-159 6-93 (287)
219 KOG1014 17 beta-hydroxysteroid 97.7 0.00033 7.1E-09 56.4 8.8 82 78-159 47-136 (312)
220 PRK07677 short chain dehydroge 97.7 0.0003 6.4E-09 56.4 8.9 80 80-159 1-88 (252)
221 PRK05717 oxidoreductase; Valid 97.7 0.0004 8.6E-09 55.8 9.6 81 79-159 9-94 (255)
222 PRK08340 glucose-1-dehydrogena 97.7 0.00033 7.1E-09 56.4 9.1 78 82-159 2-86 (259)
223 PRK10538 malonic semialdehyde 97.7 0.00047 1E-08 55.1 9.8 78 82-159 2-84 (248)
224 PRK06128 oxidoreductase; Provi 97.7 0.00071 1.5E-08 55.8 11.1 104 79-183 54-195 (300)
225 PLN02253 xanthoxin dehydrogena 97.7 0.00046 9.9E-09 56.2 9.9 81 79-159 17-104 (280)
226 PRK12828 short chain dehydroge 97.7 0.00035 7.6E-09 55.3 9.0 81 79-159 6-92 (239)
227 PRK05876 short chain dehydroge 97.7 0.00034 7.5E-09 56.9 9.0 80 79-158 5-92 (275)
228 PRK08589 short chain dehydroge 97.7 0.00036 7.9E-09 56.6 9.1 80 79-159 5-92 (272)
229 PRK09242 tropinone reductase; 97.7 0.00036 7.8E-09 56.1 9.0 81 79-159 8-98 (257)
230 PRK06483 dihydromonapterin red 97.7 0.00046 1E-08 54.7 9.5 79 80-159 2-84 (236)
231 PRK07067 sorbitol dehydrogenas 97.6 0.00048 1E-08 55.3 9.6 81 79-159 5-90 (257)
232 PRK08415 enoyl-(acyl carrier p 97.6 0.00045 9.9E-09 56.2 9.5 104 79-182 4-146 (274)
233 PRK06197 short chain dehydroge 97.6 0.00035 7.5E-09 57.8 9.0 80 79-158 15-104 (306)
234 PRK09072 short chain dehydroge 97.6 0.00053 1.2E-08 55.3 9.7 81 79-159 4-90 (263)
235 PRK09291 short chain dehydroge 97.6 0.00052 1.1E-08 55.0 9.6 75 80-158 2-82 (257)
236 PRK07774 short chain dehydroge 97.6 0.00047 1E-08 55.1 9.2 81 79-159 5-93 (250)
237 PRK06125 short chain dehydroge 97.6 0.00063 1.4E-08 54.7 10.0 79 79-159 6-91 (259)
238 PRK08862 short chain dehydroge 97.6 0.00043 9.3E-09 54.7 8.8 80 79-158 4-92 (227)
239 PRK07035 short chain dehydroge 97.6 0.00043 9.3E-09 55.4 9.0 80 79-158 7-94 (252)
240 TIGR01832 kduD 2-deoxy-D-gluco 97.6 0.00051 1.1E-08 54.8 9.3 80 79-159 4-90 (248)
241 PRK08217 fabG 3-ketoacyl-(acyl 97.6 0.00046 1E-08 55.1 9.1 80 79-158 4-91 (253)
242 PRK06720 hypothetical protein; 97.6 0.00058 1.3E-08 51.2 8.9 81 79-159 15-103 (169)
243 PRK06172 short chain dehydroge 97.6 0.00043 9.3E-09 55.5 8.8 81 79-159 6-94 (253)
244 COG0686 Ald Alanine dehydrogen 97.6 0.0012 2.6E-08 53.2 10.8 98 80-183 168-272 (371)
245 PRK06482 short chain dehydroge 97.6 0.00058 1.3E-08 55.5 9.6 79 81-159 3-86 (276)
246 PRK08643 acetoin reductase; Va 97.6 0.00042 9.2E-09 55.6 8.7 80 80-159 2-89 (256)
247 PRK08213 gluconate 5-dehydroge 97.6 0.00052 1.1E-08 55.2 9.2 81 79-159 11-99 (259)
248 PRK06505 enoyl-(acyl carrier p 97.6 0.00058 1.3E-08 55.5 9.5 80 79-158 6-94 (271)
249 PRK06179 short chain dehydroge 97.6 0.00034 7.3E-09 56.7 8.0 78 79-159 3-83 (270)
250 PRK06138 short chain dehydroge 97.6 0.00043 9.4E-09 55.3 8.6 81 79-159 4-91 (252)
251 PRK08085 gluconate 5-dehydroge 97.6 0.00051 1.1E-08 55.1 8.9 81 79-159 8-96 (254)
252 COG2264 PrmA Ribosomal protein 97.6 0.001 2.2E-08 53.9 10.4 153 18-181 107-265 (300)
253 PRK08251 short chain dehydroge 97.6 0.00057 1.2E-08 54.5 9.1 79 80-158 2-90 (248)
254 KOG1201 Hydroxysteroid 17-beta 97.6 0.00047 1E-08 55.3 8.2 81 78-159 36-124 (300)
255 PRK07454 short chain dehydroge 97.6 0.00063 1.4E-08 54.1 9.2 82 78-159 4-93 (241)
256 PRK08263 short chain dehydroge 97.6 0.00078 1.7E-08 54.8 9.9 80 80-159 3-87 (275)
257 PRK06914 short chain dehydroge 97.6 0.00056 1.2E-08 55.7 8.9 79 80-159 3-91 (280)
258 KOG0725 Reductases with broad 97.6 0.00049 1.1E-08 55.7 8.3 82 78-159 6-99 (270)
259 PRK12481 2-deoxy-D-gluconate 3 97.5 0.00074 1.6E-08 54.1 9.4 80 79-159 7-93 (251)
260 PRK07985 oxidoreductase; Provi 97.5 0.0012 2.6E-08 54.3 10.7 105 79-183 48-189 (294)
261 PRK12823 benD 1,6-dihydroxycyc 97.5 0.0007 1.5E-08 54.5 9.2 79 79-158 7-93 (260)
262 PRK05875 short chain dehydroge 97.5 0.00084 1.8E-08 54.6 9.7 80 79-158 6-95 (276)
263 PRK08159 enoyl-(acyl carrier p 97.5 0.00069 1.5E-08 55.0 9.1 82 77-158 7-97 (272)
264 PRK06079 enoyl-(acyl carrier p 97.5 0.00059 1.3E-08 54.7 8.6 80 79-159 6-93 (252)
265 PRK06181 short chain dehydroge 97.5 0.00072 1.6E-08 54.5 9.1 80 80-159 1-88 (263)
266 PRK07074 short chain dehydroge 97.5 0.00096 2.1E-08 53.6 9.8 80 80-159 2-87 (257)
267 PRK06701 short chain dehydroge 97.5 0.0016 3.4E-08 53.5 11.1 106 78-183 44-185 (290)
268 PRK12747 short chain dehydroge 97.5 0.0016 3.6E-08 52.1 11.1 105 79-183 3-148 (252)
269 PF13561 adh_short_C2: Enoyl-( 97.5 0.0041 8.8E-08 49.5 13.2 174 87-263 1-234 (241)
270 PRK05653 fabG 3-ketoacyl-(acyl 97.5 0.001 2.2E-08 52.9 9.6 80 80-159 5-92 (246)
271 PRK08277 D-mannonate oxidoredu 97.5 0.0007 1.5E-08 55.1 8.8 80 79-158 9-96 (278)
272 PRK08628 short chain dehydroge 97.5 0.00069 1.5E-08 54.4 8.7 80 79-159 6-93 (258)
273 COG4122 Predicted O-methyltran 97.5 0.0026 5.7E-08 49.3 11.3 104 73-179 53-166 (219)
274 COG1748 LYS9 Saccharopine dehy 97.5 0.0014 3.1E-08 55.2 10.6 94 81-181 2-101 (389)
275 TIGR01289 LPOR light-dependent 97.5 0.00093 2E-08 55.5 9.6 80 80-159 3-91 (314)
276 PRK07666 fabG 3-ketoacyl-(acyl 97.5 0.00073 1.6E-08 53.6 8.7 81 79-159 6-94 (239)
277 PRK12367 short chain dehydroge 97.5 0.0011 2.3E-08 53.1 9.5 74 79-159 13-89 (245)
278 PRK04148 hypothetical protein; 97.5 0.0017 3.8E-08 46.1 9.5 90 78-177 15-107 (134)
279 PRK06603 enoyl-(acyl carrier p 97.5 0.00099 2.1E-08 53.7 9.5 80 79-158 7-95 (260)
280 PRK12429 3-hydroxybutyrate deh 97.5 0.0011 2.4E-08 53.2 9.7 81 79-159 3-91 (258)
281 PRK06101 short chain dehydroge 97.5 0.0017 3.7E-08 51.6 10.6 77 81-158 2-80 (240)
282 PRK12746 short chain dehydroge 97.5 0.0032 7E-08 50.4 12.2 81 79-159 5-100 (254)
283 PRK06113 7-alpha-hydroxysteroi 97.5 0.0008 1.7E-08 54.0 8.7 81 79-159 10-98 (255)
284 PRK06124 gluconate 5-dehydroge 97.5 0.001 2.2E-08 53.4 9.2 81 79-159 10-98 (256)
285 PRK06114 short chain dehydroge 97.4 0.0011 2.3E-08 53.3 9.1 81 79-159 7-96 (254)
286 PRK12936 3-ketoacyl-(acyl-carr 97.4 0.0014 3E-08 52.1 9.7 81 79-159 5-90 (245)
287 PRK00258 aroE shikimate 5-dehy 97.4 0.0019 4.1E-08 52.6 10.5 95 78-180 121-222 (278)
288 PRK12937 short chain dehydroge 97.4 0.0025 5.4E-08 50.7 11.1 104 79-182 4-142 (245)
289 PRK13940 glutamyl-tRNA reducta 97.4 0.002 4.4E-08 55.3 11.1 74 78-160 179-253 (414)
290 PRK07856 short chain dehydroge 97.4 0.00069 1.5E-08 54.3 7.9 78 79-159 5-85 (252)
291 PRK07791 short chain dehydroge 97.4 0.00084 1.8E-08 55.0 8.5 82 78-159 4-102 (286)
292 PRK13394 3-hydroxybutyrate deh 97.4 0.00099 2.2E-08 53.6 8.8 81 79-159 6-94 (262)
293 PRK06935 2-deoxy-D-gluconate 3 97.4 0.00084 1.8E-08 54.0 8.4 80 79-159 14-101 (258)
294 PRK07533 enoyl-(acyl carrier p 97.4 0.0013 2.8E-08 53.0 9.4 104 79-182 9-151 (258)
295 PRK07889 enoyl-(acyl carrier p 97.4 0.001 2.2E-08 53.5 8.7 81 79-159 6-95 (256)
296 PRK06463 fabG 3-ketoacyl-(acyl 97.4 0.0015 3.3E-08 52.4 9.6 80 79-159 6-89 (255)
297 PRK12826 3-ketoacyl-(acyl-carr 97.4 0.0011 2.4E-08 52.8 8.7 81 79-159 5-93 (251)
298 PF00106 adh_short: short chai 97.4 0.00075 1.6E-08 50.3 7.2 79 81-159 1-90 (167)
299 PRK07097 gluconate 5-dehydroge 97.4 0.0013 2.8E-08 53.1 9.1 81 79-159 9-97 (265)
300 PRK06398 aldose dehydrogenase; 97.4 0.00041 8.8E-09 55.9 6.1 76 79-159 5-82 (258)
301 PRK13943 protein-L-isoaspartat 97.4 0.0027 5.9E-08 52.6 11.0 100 73-178 74-179 (322)
302 PRK08690 enoyl-(acyl carrier p 97.4 0.001 2.3E-08 53.6 8.5 81 79-159 5-94 (261)
303 PRK13942 protein-L-isoaspartat 97.4 0.00065 1.4E-08 53.0 7.0 98 73-178 70-175 (212)
304 PRK08226 short chain dehydroge 97.4 0.0015 3.2E-08 52.7 9.3 81 79-159 5-92 (263)
305 KOG1208 Dehydrogenases with di 97.4 0.0015 3.3E-08 53.9 9.3 104 78-181 33-172 (314)
306 PRK08261 fabG 3-ketoacyl-(acyl 97.4 0.00029 6.2E-09 61.6 5.5 94 74-182 28-126 (450)
307 PRK06940 short chain dehydroge 97.4 0.0046 1E-07 50.3 12.0 101 80-182 2-128 (275)
308 PRK07577 short chain dehydroge 97.4 0.00098 2.1E-08 52.6 7.9 75 79-159 2-78 (234)
309 PRK00107 gidB 16S rRNA methylt 97.4 0.003 6.6E-08 48.1 10.1 98 75-179 41-145 (187)
310 PRK08416 7-alpha-hydroxysteroi 97.4 0.0013 2.8E-08 53.0 8.7 80 79-158 7-96 (260)
311 PF00670 AdoHcyase_NAD: S-aden 97.4 0.0025 5.4E-08 46.9 9.1 90 77-180 20-111 (162)
312 PRK12384 sorbitol-6-phosphate 97.4 0.0013 2.9E-08 52.8 8.6 80 80-159 2-91 (259)
313 PRK07984 enoyl-(acyl carrier p 97.4 0.0015 3.3E-08 52.7 8.9 80 79-158 5-93 (262)
314 PRK07424 bifunctional sterol d 97.3 0.0019 4.1E-08 55.3 9.8 76 79-159 177-255 (406)
315 COG2226 UbiE Methylase involve 97.3 0.0028 6E-08 49.9 9.9 102 75-181 47-158 (238)
316 PRK13944 protein-L-isoaspartat 97.3 0.0015 3.2E-08 50.7 8.5 98 73-178 66-172 (205)
317 TIGR01035 hemA glutamyl-tRNA r 97.3 0.0027 5.8E-08 54.9 10.8 74 76-159 176-250 (417)
318 TIGR03206 benzo_BadH 2-hydroxy 97.3 0.0016 3.4E-08 52.0 8.8 80 79-158 2-89 (250)
319 PLN02730 enoyl-[acyl-carrier-p 97.3 0.0026 5.6E-08 52.5 10.1 38 79-117 8-47 (303)
320 PRK08303 short chain dehydroge 97.3 0.002 4.4E-08 53.3 9.4 80 79-158 7-105 (305)
321 CHL00194 ycf39 Ycf39; Provisio 97.3 0.0033 7.1E-08 52.3 10.7 94 82-181 2-111 (317)
322 KOG1200 Mitochondrial/plastidi 97.3 0.0024 5.1E-08 48.1 8.6 81 79-159 13-100 (256)
323 PRK05650 short chain dehydroge 97.3 0.0017 3.7E-08 52.6 8.8 78 82-159 2-87 (270)
324 PRK08993 2-deoxy-D-gluconate 3 97.3 0.0019 4.2E-08 51.8 9.1 80 79-159 9-95 (253)
325 PLN02476 O-methyltransferase 97.3 0.0047 1E-07 49.9 11.0 104 71-177 110-226 (278)
326 PRK07102 short chain dehydroge 97.3 0.0021 4.6E-08 51.1 9.1 78 81-159 2-86 (243)
327 PF01135 PCMT: Protein-L-isoas 97.3 0.0015 3.2E-08 50.7 7.8 99 73-178 66-171 (209)
328 PLN00141 Tic62-NAD(P)-related 97.3 0.0021 4.6E-08 51.5 8.9 100 80-182 17-134 (251)
329 PRK08945 putative oxoacyl-(acy 97.3 0.0021 4.6E-08 51.2 8.9 83 77-159 9-102 (247)
330 PRK08278 short chain dehydroge 97.3 0.0022 4.7E-08 52.1 9.1 80 79-159 5-100 (273)
331 PRK05599 hypothetical protein; 97.3 0.0018 4E-08 51.7 8.5 77 82-159 2-87 (246)
332 PRK06997 enoyl-(acyl carrier p 97.3 0.0017 3.7E-08 52.4 8.3 81 79-159 5-94 (260)
333 PRK07775 short chain dehydroge 97.3 0.0033 7E-08 51.1 10.0 80 80-159 10-97 (274)
334 PRK12743 oxidoreductase; Provi 97.3 0.0024 5.2E-08 51.3 9.2 80 80-159 2-90 (256)
335 PF02670 DXP_reductoisom: 1-de 97.3 0.01 2.2E-07 42.0 11.0 93 83-178 1-120 (129)
336 PRK06077 fabG 3-ketoacyl-(acyl 97.3 0.0073 1.6E-07 48.2 11.9 103 80-183 6-144 (252)
337 PRK09135 pteridine reductase; 97.2 0.0024 5.3E-08 50.8 8.9 80 79-158 5-94 (249)
338 TIGR01963 PHB_DH 3-hydroxybuty 97.2 0.0019 4.1E-08 51.7 8.4 80 80-159 1-88 (255)
339 PRK06523 short chain dehydroge 97.2 0.00098 2.1E-08 53.6 6.7 76 79-158 8-86 (260)
340 COG2227 UbiG 2-polyprenyl-3-me 97.2 0.0035 7.7E-08 48.8 9.2 94 78-178 58-160 (243)
341 TIGR00507 aroE shikimate 5-deh 97.2 0.012 2.7E-07 47.7 12.9 94 78-180 115-215 (270)
342 PRK08594 enoyl-(acyl carrier p 97.2 0.0028 6E-08 51.1 9.1 104 79-182 6-150 (257)
343 TIGR01829 AcAcCoA_reduct aceto 97.2 0.0024 5.3E-08 50.6 8.7 79 81-159 1-88 (242)
344 PRK07069 short chain dehydroge 97.2 0.0021 4.6E-08 51.3 8.4 77 83-159 2-89 (251)
345 PRK05447 1-deoxy-D-xylulose 5- 97.2 0.0077 1.7E-07 50.7 11.7 97 81-179 2-122 (385)
346 PRK07370 enoyl-(acyl carrier p 97.2 0.0021 4.6E-08 51.7 8.3 104 79-182 5-150 (258)
347 PRK08936 glucose-1-dehydrogena 97.2 0.003 6.4E-08 50.9 9.1 81 79-159 6-95 (261)
348 PRK08264 short chain dehydroge 97.2 0.0032 6.9E-08 49.9 9.1 77 79-159 5-83 (238)
349 TIGR02632 RhaD_aldol-ADH rhamn 97.2 0.002 4.4E-08 59.1 8.8 81 79-159 413-503 (676)
350 PRK08063 enoyl-(acyl carrier p 97.2 0.0026 5.6E-08 50.8 8.4 81 79-159 3-92 (250)
351 PRK05855 short chain dehydroge 97.2 0.0022 4.8E-08 57.8 8.8 81 79-159 314-402 (582)
352 PRK05565 fabG 3-ketoacyl-(acyl 97.2 0.0027 6E-08 50.4 8.5 80 80-159 5-93 (247)
353 PRK12550 shikimate 5-dehydroge 97.2 0.0043 9.2E-08 50.2 9.5 70 76-159 118-188 (272)
354 PRK08642 fabG 3-ketoacyl-(acyl 97.2 0.004 8.6E-08 49.8 9.3 80 79-158 4-90 (253)
355 PLN02781 Probable caffeoyl-CoA 97.2 0.0092 2E-07 47.3 11.1 104 71-177 60-176 (234)
356 KOG1610 Corticosteroid 11-beta 97.2 0.019 4.1E-07 46.6 12.8 107 78-184 27-169 (322)
357 PLN00015 protochlorophyllide r 97.1 0.0031 6.7E-08 52.2 8.9 76 84-159 1-85 (308)
358 PTZ00098 phosphoethanolamine N 97.1 0.0066 1.4E-07 49.1 10.4 103 73-180 46-157 (263)
359 TIGR00438 rrmJ cell division p 97.1 0.0065 1.4E-07 46.4 10.0 98 75-180 28-147 (188)
360 PRK06171 sorbitol-6-phosphate 97.1 0.0011 2.4E-08 53.6 5.9 77 79-159 8-87 (266)
361 PRK09134 short chain dehydroge 97.1 0.0051 1.1E-07 49.4 9.8 81 79-159 8-97 (258)
362 cd01065 NAD_bind_Shikimate_DH 97.1 0.012 2.6E-07 43.3 11.0 94 78-180 17-117 (155)
363 TIGR02415 23BDH acetoin reduct 97.1 0.0033 7.1E-08 50.3 8.5 79 81-159 1-87 (254)
364 PRK12549 shikimate 5-dehydroge 97.1 0.015 3.3E-07 47.5 12.3 93 79-180 126-228 (284)
365 PF01596 Methyltransf_3: O-met 97.1 0.0023 5E-08 49.5 7.1 105 71-178 37-154 (205)
366 PRK05557 fabG 3-ketoacyl-(acyl 97.1 0.0049 1.1E-07 48.9 9.4 81 79-159 4-93 (248)
367 PRK07201 short chain dehydroge 97.1 0.0042 9.1E-08 57.1 10.1 80 80-159 371-458 (657)
368 TIGR01809 Shik-DH-AROM shikima 97.1 0.0028 6E-08 51.7 8.0 75 79-159 124-200 (282)
369 PRK12938 acetyacetyl-CoA reduc 97.1 0.0028 6E-08 50.5 7.9 81 79-159 2-91 (246)
370 COG0169 AroE Shikimate 5-dehyd 97.1 0.0029 6.4E-08 51.2 7.9 91 79-180 125-227 (283)
371 PF01262 AlaDh_PNT_C: Alanine 97.1 0.0042 9.2E-08 46.5 8.3 96 80-182 20-142 (168)
372 PRK08219 short chain dehydroge 97.1 0.0044 9.5E-08 48.6 8.8 77 80-159 3-81 (227)
373 PRK00811 spermidine synthase; 97.1 0.0065 1.4E-07 49.6 9.8 97 78-178 75-190 (283)
374 COG2519 GCD14 tRNA(1-methylade 97.0 0.0048 1E-07 48.5 8.2 101 73-180 88-196 (256)
375 PRK12745 3-ketoacyl-(acyl-carr 97.0 0.006 1.3E-07 48.8 9.3 80 80-159 2-90 (256)
376 TIGR02469 CbiT precorrin-6Y C5 97.0 0.013 2.8E-07 41.1 10.0 98 74-178 14-121 (124)
377 TIGR00080 pimt protein-L-isoas 97.0 0.0029 6.3E-08 49.5 7.1 98 73-178 71-176 (215)
378 PF06325 PrmA: Ribosomal prote 97.0 0.00073 1.6E-08 55.1 3.8 145 19-182 107-262 (295)
379 PRK07402 precorrin-6B methylas 97.0 0.033 7.2E-07 42.8 12.8 101 73-180 34-143 (196)
380 PLN02657 3,8-divinyl protochlo 97.0 0.0067 1.5E-07 52.0 9.7 104 77-181 57-183 (390)
381 PLN02366 spermidine synthase 97.0 0.0088 1.9E-07 49.3 9.9 99 78-179 90-206 (308)
382 PRK11207 tellurite resistance 97.0 0.0027 5.9E-08 48.9 6.6 98 75-180 26-135 (197)
383 cd01080 NAD_bind_m-THF_DH_Cycl 97.0 0.012 2.7E-07 43.9 9.8 94 60-181 24-118 (168)
384 PF03807 F420_oxidored: NADP o 97.0 0.029 6.4E-07 37.5 11.0 86 82-178 1-93 (96)
385 PRK14027 quinate/shikimate deh 97.0 0.014 2.9E-07 47.7 10.8 75 79-159 126-204 (283)
386 TIGR02622 CDP_4_6_dhtase CDP-g 97.0 0.0043 9.4E-08 52.3 8.3 76 79-158 3-84 (349)
387 PLN02589 caffeoyl-CoA O-methyl 97.0 0.019 4.2E-07 45.7 11.3 104 71-177 71-188 (247)
388 PRK12935 acetoacetyl-CoA reduc 97.0 0.0069 1.5E-07 48.2 9.0 81 79-159 5-94 (247)
389 PRK12548 shikimate 5-dehydroge 97.0 0.0076 1.6E-07 49.4 9.3 96 79-180 125-237 (289)
390 PF05368 NmrA: NmrA-like famil 96.9 0.0077 1.7E-07 47.6 9.1 70 83-158 1-73 (233)
391 PRK07578 short chain dehydroge 96.9 0.013 2.8E-07 45.1 10.1 87 82-182 2-114 (199)
392 TIGR02685 pter_reduc_Leis pter 96.9 0.0058 1.3E-07 49.4 8.5 79 81-159 2-94 (267)
393 PF03435 Saccharop_dh: Sacchar 96.9 0.0099 2.1E-07 50.9 10.2 90 83-178 1-97 (386)
394 KOG4022 Dihydropteridine reduc 96.9 0.0025 5.3E-08 46.4 5.3 96 80-181 3-131 (236)
395 PRK07792 fabG 3-ketoacyl-(acyl 96.9 0.0067 1.5E-07 50.2 8.8 81 79-159 11-99 (306)
396 PRK03369 murD UDP-N-acetylmura 96.9 0.0092 2E-07 52.7 10.0 73 76-159 8-80 (488)
397 PRK08220 2,3-dihydroxybenzoate 96.9 0.0076 1.6E-07 48.1 8.7 75 79-159 7-86 (252)
398 PRK06123 short chain dehydroge 96.9 0.0083 1.8E-07 47.8 8.8 80 80-159 2-90 (248)
399 PF02737 3HCDH_N: 3-hydroxyacy 96.9 0.011 2.4E-07 44.8 8.9 39 82-121 1-39 (180)
400 PRK06947 glucose-1-dehydrogena 96.9 0.0087 1.9E-07 47.7 8.8 79 81-159 3-90 (248)
401 PRK12825 fabG 3-ketoacyl-(acyl 96.8 0.0094 2E-07 47.3 8.9 80 79-158 5-93 (249)
402 PLN02244 tocopherol O-methyltr 96.8 0.0095 2.1E-07 50.1 9.0 98 78-180 117-224 (340)
403 COG2910 Putative NADH-flavin r 96.8 0.0034 7.3E-08 46.8 5.4 92 82-182 2-107 (211)
404 PRK11036 putative S-adenosyl-L 96.8 0.016 3.6E-07 46.5 9.9 97 78-179 43-149 (255)
405 TIGR01500 sepiapter_red sepiap 96.8 0.012 2.6E-07 47.2 9.1 43 82-124 2-48 (256)
406 PF02719 Polysacc_synt_2: Poly 96.8 0.018 3.8E-07 46.8 9.8 73 83-159 1-87 (293)
407 PRK07066 3-hydroxybutyryl-CoA 96.8 0.081 1.8E-06 44.0 13.9 40 80-120 7-46 (321)
408 PRK09730 putative NAD(P)-bindi 96.8 0.011 2.5E-07 46.9 8.8 79 81-159 2-89 (247)
409 PRK12744 short chain dehydroge 96.8 0.0093 2E-07 47.9 8.3 81 79-159 7-99 (257)
410 TIGR03589 PseB UDP-N-acetylglu 96.7 0.016 3.5E-07 48.4 9.8 76 79-159 3-84 (324)
411 cd01075 NAD_bind_Leu_Phe_Val_D 96.7 0.043 9.4E-07 42.3 11.5 80 79-170 27-107 (200)
412 PRK07041 short chain dehydroge 96.7 0.0083 1.8E-07 47.2 7.8 74 84-159 1-79 (230)
413 PLN02233 ubiquinone biosynthes 96.7 0.026 5.6E-07 45.5 10.7 98 75-180 69-183 (261)
414 PRK07023 short chain dehydroge 96.7 0.013 2.7E-07 46.6 8.9 77 81-159 2-87 (243)
415 COG1052 LdhA Lactate dehydroge 96.7 0.035 7.7E-07 46.1 11.5 87 79-180 145-237 (324)
416 PRK14175 bifunctional 5,10-met 96.7 0.025 5.3E-07 45.9 10.3 93 60-181 138-232 (286)
417 TIGR03840 TMPT_Se_Te thiopurin 96.7 0.0084 1.8E-07 46.8 7.5 100 78-180 33-153 (213)
418 PLN00016 RNA-binding protein; 96.7 0.019 4E-07 49.1 10.3 97 78-181 50-166 (378)
419 PRK12748 3-ketoacyl-(acyl-carr 96.7 0.01 2.2E-07 47.6 8.2 35 79-113 4-40 (256)
420 PRK07502 cyclohexadienyl dehyd 96.7 0.02 4.2E-07 47.5 10.0 89 81-180 7-101 (307)
421 COG0373 HemA Glutamyl-tRNA red 96.7 0.07 1.5E-06 45.6 13.1 93 78-180 176-275 (414)
422 PRK06718 precorrin-2 dehydroge 96.7 0.0088 1.9E-07 46.2 7.3 91 79-180 9-101 (202)
423 TIGR00477 tehB tellurite resis 96.7 0.008 1.7E-07 46.2 7.0 99 73-180 24-134 (195)
424 PLN03075 nicotianamine synthas 96.7 0.023 5E-07 46.3 9.8 97 79-179 123-233 (296)
425 PRK14982 acyl-ACP reductase; P 96.7 0.016 3.5E-07 48.3 9.2 93 78-181 153-248 (340)
426 PRK00536 speE spermidine synth 96.7 0.0073 1.6E-07 48.4 6.9 99 78-180 71-172 (262)
427 PRK12824 acetoacetyl-CoA reduc 96.7 0.015 3.4E-07 46.1 8.9 79 81-159 3-90 (245)
428 PF02254 TrkA_N: TrkA-N domain 96.7 0.069 1.5E-06 37.1 11.2 92 83-179 1-96 (116)
429 PRK12827 short chain dehydroge 96.6 0.014 3.1E-07 46.4 8.6 81 79-159 5-97 (249)
430 PLN02989 cinnamyl-alcohol dehy 96.6 0.011 2.5E-07 49.2 8.1 39 79-117 4-42 (325)
431 PRK13656 trans-2-enoyl-CoA red 96.6 0.021 4.5E-07 48.3 9.3 79 78-159 39-141 (398)
432 PRK04457 spermidine synthase; 96.6 0.044 9.4E-07 44.3 11.0 97 78-178 65-176 (262)
433 PRK14967 putative methyltransf 96.6 0.028 6E-07 44.2 9.7 95 75-179 32-159 (223)
434 PLN02653 GDP-mannose 4,6-dehyd 96.6 0.0065 1.4E-07 51.0 6.4 37 79-115 5-41 (340)
435 PRK08655 prephenate dehydrogen 96.6 0.026 5.7E-07 49.1 10.2 44 82-126 2-46 (437)
436 PF08704 GCD14: tRNA methyltra 96.6 0.014 3E-07 46.4 7.8 105 73-180 34-147 (247)
437 COG1028 FabG Dehydrogenases wi 96.6 0.02 4.3E-07 45.7 8.9 81 79-159 4-96 (251)
438 PRK01683 trans-aconitate 2-met 96.6 0.042 9.2E-07 44.2 10.8 96 74-178 26-129 (258)
439 PRK08309 short chain dehydroge 96.5 0.22 4.9E-06 37.6 15.2 89 82-171 2-97 (177)
440 TIGR01470 cysG_Nterm siroheme 96.5 0.022 4.8E-07 44.1 8.6 92 79-180 8-101 (205)
441 PRK06924 short chain dehydroge 96.5 0.023 5E-07 45.3 9.1 41 81-121 2-43 (251)
442 PRK12859 3-ketoacyl-(acyl-carr 96.5 0.02 4.4E-07 45.9 8.7 80 79-159 5-106 (256)
443 KOG1199 Short-chain alcohol de 96.5 0.019 4.1E-07 42.4 7.5 82 77-159 6-93 (260)
444 PRK08618 ornithine cyclodeamin 96.5 0.025 5.4E-07 47.3 9.4 93 78-181 125-223 (325)
445 cd05311 NAD_bind_2_malic_enz N 96.5 0.086 1.9E-06 41.5 11.9 90 78-179 23-128 (226)
446 PLN02896 cinnamyl-alcohol dehy 96.5 0.029 6.2E-07 47.4 9.9 77 78-159 8-89 (353)
447 PRK01581 speE spermidine synth 96.5 0.072 1.6E-06 44.7 11.8 99 77-180 148-269 (374)
448 PLN00203 glutamyl-tRNA reducta 96.5 0.034 7.3E-07 49.3 10.5 73 80-159 266-339 (519)
449 PF03446 NAD_binding_2: NAD bi 96.5 0.06 1.3E-06 40.1 10.4 87 81-180 2-95 (163)
450 PLN02986 cinnamyl-alcohol dehy 96.5 0.019 4.2E-07 47.7 8.6 40 79-118 4-43 (322)
451 PLN02686 cinnamoyl-CoA reducta 96.5 0.025 5.3E-07 48.1 9.3 45 77-121 50-94 (367)
452 PF13241 NAD_binding_7: Putati 96.5 0.005 1.1E-07 42.0 4.1 87 79-181 6-93 (103)
453 PF01370 Epimerase: NAD depend 96.4 0.021 4.6E-07 45.0 8.4 74 83-159 1-75 (236)
454 PRK14103 trans-aconitate 2-met 96.4 0.024 5.1E-07 45.6 8.7 95 73-178 23-125 (255)
455 KOG1207 Diacetyl reductase/L-x 96.4 0.023 4.9E-07 42.1 7.5 76 79-159 6-87 (245)
456 PRK06719 precorrin-2 dehydroge 96.4 0.023 5.1E-07 42.0 7.9 88 79-178 12-99 (157)
457 PRK00312 pcm protein-L-isoaspa 96.4 0.019 4.2E-07 44.7 7.8 99 73-178 72-174 (212)
458 PRK08287 cobalt-precorrin-6Y C 96.4 0.12 2.6E-06 39.4 12.0 98 73-178 25-130 (187)
459 PRK10258 biotin biosynthesis p 96.4 0.35 7.5E-06 38.7 15.0 94 78-180 41-141 (251)
460 PRK08317 hypothetical protein; 96.4 0.033 7.1E-07 44.0 9.1 103 73-180 13-125 (241)
461 PRK06300 enoyl-(acyl carrier p 96.4 0.077 1.7E-06 43.8 11.3 34 79-112 7-42 (299)
462 TIGR01472 gmd GDP-mannose 4,6- 96.4 0.015 3.3E-07 48.8 7.4 35 81-115 1-35 (343)
463 PRK07574 formate dehydrogenase 96.4 0.029 6.2E-07 47.8 8.9 89 79-180 191-285 (385)
464 TIGR01830 3oxo_ACP_reduc 3-oxo 96.4 0.024 5.2E-07 44.7 8.2 76 83-159 1-86 (239)
465 PLN02520 bifunctional 3-dehydr 96.3 0.068 1.5E-06 47.7 11.6 93 79-180 378-476 (529)
466 TIGR03649 ergot_EASG ergot alk 96.3 0.018 4E-07 47.0 7.6 95 82-180 1-105 (285)
467 PRK14189 bifunctional 5,10-met 96.3 0.052 1.1E-06 44.0 9.8 94 60-181 138-232 (285)
468 PF01209 Ubie_methyltran: ubiE 96.3 0.014 3.1E-07 46.2 6.5 101 73-181 41-155 (233)
469 PRK13255 thiopurine S-methyltr 96.3 0.02 4.3E-07 44.8 7.3 98 76-178 34-154 (218)
470 PRK12749 quinate/shikimate deh 96.3 0.069 1.5E-06 43.7 10.7 78 79-159 123-206 (288)
471 PRK14968 putative methyltransf 96.3 0.023 4.9E-07 43.2 7.4 44 77-123 21-64 (188)
472 PLN03139 formate dehydrogenase 96.3 0.032 6.9E-07 47.5 8.8 89 79-180 198-292 (386)
473 PF13659 Methyltransf_26: Meth 96.3 0.024 5.1E-07 39.4 6.9 96 80-178 1-114 (117)
474 PF08241 Methyltransf_11: Meth 96.3 0.0052 1.1E-07 40.8 3.3 82 90-177 5-95 (95)
475 PRK06849 hypothetical protein; 96.3 0.059 1.3E-06 46.2 10.6 95 79-175 3-103 (389)
476 TIGR01831 fabG_rel 3-oxoacyl-( 96.3 0.024 5.3E-07 44.8 7.7 76 83-158 1-85 (239)
477 PRK14191 bifunctional 5,10-met 96.2 0.094 2E-06 42.5 10.9 94 60-181 137-231 (285)
478 PF13847 Methyltransf_31: Meth 96.2 0.022 4.8E-07 41.8 6.8 96 78-180 2-111 (152)
479 PF02558 ApbA: Ketopantoate re 96.2 0.029 6.2E-07 41.1 7.4 91 83-180 1-102 (151)
480 PRK14903 16S rRNA methyltransf 96.2 0.092 2E-06 45.7 11.5 100 74-180 232-367 (431)
481 COG1090 Predicted nucleoside-d 96.2 0.009 1.9E-07 47.6 4.8 66 83-159 1-66 (297)
482 PRK13243 glyoxylate reductase; 96.2 0.043 9.3E-07 46.0 9.2 87 79-180 149-241 (333)
483 PRK14188 bifunctional 5,10-met 96.2 0.055 1.2E-06 44.3 9.4 92 60-181 138-232 (296)
484 TIGR03466 HpnA hopanoid-associ 96.2 0.014 3.1E-07 48.5 6.3 71 82-158 2-73 (328)
485 TIGR00138 gidB 16S rRNA methyl 96.2 0.049 1.1E-06 41.3 8.6 93 79-178 42-141 (181)
486 PF08659 KR: KR domain; Inter 96.2 0.054 1.2E-06 41.0 8.9 77 82-159 2-91 (181)
487 PLN02214 cinnamoyl-CoA reducta 96.2 0.043 9.4E-07 46.2 9.1 39 78-116 8-46 (342)
488 TIGR02752 MenG_heptapren 2-hep 96.2 0.038 8.2E-07 43.6 8.3 100 73-180 39-152 (231)
489 PRK15181 Vi polysaccharide bio 96.1 0.042 9E-07 46.4 8.9 50 65-115 1-50 (348)
490 PRK14192 bifunctional 5,10-met 96.1 0.099 2.1E-06 42.6 10.6 78 78-182 157-234 (283)
491 TIGR00563 rsmB ribosomal RNA s 96.1 0.08 1.7E-06 46.0 10.7 102 73-180 232-369 (426)
492 COG3963 Phospholipid N-methylt 96.1 0.19 4.1E-06 37.1 10.7 119 58-180 28-157 (194)
493 TIGR00715 precor6x_red precorr 96.1 0.018 3.8E-07 46.2 6.2 73 82-159 2-75 (256)
494 PF01113 DapB_N: Dihydrodipico 96.1 0.085 1.8E-06 37.3 9.1 91 82-181 2-99 (124)
495 TIGR02356 adenyl_thiF thiazole 96.1 0.077 1.7E-06 41.0 9.5 34 79-113 20-54 (202)
496 TIGR00417 speE spermidine synt 96.1 0.073 1.6E-06 43.2 9.8 98 78-179 71-186 (270)
497 PRK04266 fibrillarin; Provisio 96.1 0.066 1.4E-06 42.2 9.2 100 74-178 67-175 (226)
498 COG1086 Predicted nucleoside-d 96.1 0.032 7E-07 49.0 7.9 171 79-253 249-461 (588)
499 PRK15451 tRNA cmo(5)U34 methyl 96.1 0.048 1E-06 43.6 8.5 97 77-180 54-165 (247)
500 PRK15469 ghrA bifunctional gly 96.1 0.027 5.7E-07 46.7 7.2 87 79-180 135-227 (312)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=4e-44 Score=288.27 Aligned_cols=244 Identities=25% Similarity=0.347 Sum_probs=218.7
Q ss_pred ccceEEEEeccCCCCCCCCCeEEe-c------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337 5 SGYGVAKVLDSENPEFSKGDLVWG-M------------------------------TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 5 ~~~G~v~~vg~~v~~~~~Gd~V~~-~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
|++|+|.++|++|+.|++||||-. + |+|+||+++|+.+++++ |++++.
T Consensus 64 EivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~i-P~~~d~ 142 (339)
T COG1064 64 EIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKI-PEGLDL 142 (339)
T ss_pred ceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEEC-CCCCCh
Confidence 556778889999999999999954 2 89999999999999999 999665
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~ 133 (269)
. .+|++.|++.|+|++| +..+++||++|+|.|+ ||+|++++|+|+++|++|+++++++++.++++ ++|++++++.+
T Consensus 143 ~-~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~ 218 (339)
T COG1064 143 A-EAAPLLCAGITTYRAL-KKANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSS 218 (339)
T ss_pred h-hhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcC
Confidence 4 6899999999999999 5589999999999999 79999999999999999999999999999999 99999999987
Q ss_pred ChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc
Q 024337 134 EEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH 213 (269)
Q Consensus 134 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (269)
+. +..+.+++. +|+++||++..+++.+++.|+++|+++.+|.+.. .+....+...++.+++++.|+..++
T Consensus 219 ~~-~~~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~----~~~~~~~~~~li~~~~~i~GS~~g~- 288 (339)
T COG1064 219 DS-DALEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGG----GPIPLLPAFLLILKEISIVGSLVGT- 288 (339)
T ss_pred Cc-hhhHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCC----cccCCCCHHHhhhcCeEEEEEecCC-
Confidence 55 777777663 9999999998899999999999999999998631 1223355677889999999999877
Q ss_pred ccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337 214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (269)
Q Consensus 214 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 267 (269)
..++++++++..+|+++|.+.+.++++++++|++.|.+++..||+|+++.
T Consensus 289 ----~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 ----RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred ----HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 78899999999999999999778999999999999999999999999875
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.5e-43 Score=291.53 Aligned_cols=257 Identities=31% Similarity=0.478 Sum_probs=222.5
Q ss_pred CCcccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337 2 QPISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC 75 (269)
Q Consensus 2 ~~i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~ 75 (269)
+..|++|+|+++|++|+.|++||+|+.+ |+|+||+.+|++.++++ |++++.. ++|++++.+.|||++|....
T Consensus 61 ~G~d~aG~V~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~-P~~ls~~-eAAal~~~~~TA~~~l~~~~ 138 (326)
T COG0604 61 PGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPL-PDGLSFE-EAAALPLAGLTAWLALFDRA 138 (326)
T ss_pred ccceeEEEEEEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhc
Confidence 3478899999999999999999999887 69999999999999999 9996555 69999999999999999989
Q ss_pred cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEE
Q 024337 76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYF 154 (269)
Q Consensus 76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi 154 (269)
+++++++|||+||+|++|++++|+||++|+++++++.++++.++++ ++|++++++|.+. ++.+.+++.+++ ++|+|+
T Consensus 139 ~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~ 216 (326)
T COG0604 139 GLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVL 216 (326)
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEE
Confidence 9999999999999999999999999999987777777888888888 9999999999997 899999999988 999999
Q ss_pred eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCe
Q 024337 155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKL 233 (269)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ 233 (269)
|++|+..+..+++.|+++|+++.+|...+ ......+...++.+.....+...... +....+.++.+.+++.+|.+
T Consensus 217 D~vG~~~~~~~l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l 292 (326)
T COG0604 217 DTVGGDTFAASLAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKL 292 (326)
T ss_pred ECCCHHHHHHHHHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999998652 12223445667778888877766532 24556788999999999999
Q ss_pred eeeeehccccccHHHHHHHHhc-CCCcceEEEEe
Q 024337 234 VYVEDMAEGLESAPAALIGLFS-GQNVGKQVVAV 266 (269)
Q Consensus 234 ~~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvv~~ 266 (269)
++.+..+|||++..++...... ++..||+|+++
T Consensus 293 ~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 293 KPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred cceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 9999999999996555444433 58899999974
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.3e-42 Score=262.09 Aligned_cols=259 Identities=23% Similarity=0.335 Sum_probs=226.7
Q ss_pred CCcccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337 2 QPISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK 78 (269)
Q Consensus 2 ~~i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (269)
|..|++|+|+.+|++|+++++||||+-+ |.|+|+..+|...++++ |+.+++. .+|++...+.|||..+++..+++
T Consensus 68 pGmEaaGvVvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~v-pe~i~~k-~aaa~llq~lTAy~ll~e~y~vk 145 (336)
T KOG1197|consen 68 PGMEAAGVVVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKV-PEAITLK-EAAALLLQGLTAYMLLFEAYNVK 145 (336)
T ss_pred CCcccceEEEEecCCccccccccEEEEeccchhhheeccccceeeccC-CcccCHH-HHHHHHHHHHHHHHHHHHhcCCC
Confidence 4578999999999999999999999876 89999999999999999 8885544 58889999999999999999999
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENV 157 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~ 157 (269)
+|++||++.|+||+|++++|+++..|++++++..+.++++.++ +.|+++.|+++.+ |+.+++.+++++ |+|+++|.+
T Consensus 146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyDsv 223 (336)
T KOG1197|consen 146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYDSV 223 (336)
T ss_pred CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeeeccc
Confidence 9999999999999999999999999999999999999999999 9999999999998 999999999988 999999999
Q ss_pred CchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc---ccchHHHHHHHHHHHHCCCee
Q 024337 158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKLV 234 (269)
Q Consensus 158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~ 234 (269)
|.+++..++.+|++.|.+|.+|..++ ...++.+..+..+++.+..-.+..+ +........+++.++.+|.++
T Consensus 224 G~dt~~~sl~~Lk~~G~mVSfG~asg-----l~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk 298 (336)
T KOG1197|consen 224 GKDTFAKSLAALKPMGKMVSFGNASG-----LIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLK 298 (336)
T ss_pred cchhhHHHHHHhccCceEEEeccccC-----CCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccc
Confidence 99999999999999999999998653 3344555555556665544333223 222333456777788899999
Q ss_pred eeeehccccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269 (269)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~~ 269 (269)
+.+.++|||+++.+|+.+++++...||+++.+.+|
T Consensus 299 ~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~ 333 (336)
T KOG1197|consen 299 IHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE 333 (336)
T ss_pred eeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence 99999999999999999999999999999988764
No 4
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3e-41 Score=282.57 Aligned_cols=265 Identities=68% Similarity=1.151 Sum_probs=221.3
Q ss_pred cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCc--ee--ecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPY--LF--KIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH 79 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~--~~--~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~ 79 (269)
++++|+|..+|++++.|++||+|+++|+|+||.+++.+. ++ ++ |++++.+.++|++++++.|||+++...+++++
T Consensus 80 ~~~~G~v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~-P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~ 158 (348)
T PLN03154 80 IEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQL-QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKK 158 (348)
T ss_pred eEeeEEEEEEecCCCCCCCCCEEEecCCcEEEEEEeccccceEEccC-cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCC
Confidence 467899999999999999999999999999999999863 53 45 77755442477999999999999987788999
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG 159 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 159 (269)
+++|||+|++|++|++++|+||.+|++|+++++++++.+.+++++|++.++|+++..++.+.+++.+++++|++|||+|+
T Consensus 159 g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~ 238 (348)
T PLN03154 159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGG 238 (348)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCH
Confidence 99999999999999999999999999999999999999988647999999998742167777777776689999999999
Q ss_pred hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeeh
Q 024337 160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM 239 (269)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 239 (269)
..+..++++++++|+++.+|...+..........++..++.+++++.|+....+.....+.++.+++++++|++++.+..
T Consensus 239 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~ 318 (348)
T PLN03154 239 DMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDM 318 (348)
T ss_pred HHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceec
Confidence 89999999999999999998754321110001124556788899999887654433345678899999999999988888
Q ss_pred ccccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337 240 AEGLESAPAALIGLFSGQNVGKQVVAVAPE 269 (269)
Q Consensus 240 ~~~~~~~~~a~~~~~~~~~~gkvvv~~~~~ 269 (269)
+|+|+++++|++.+.+++..||+|++++++
T Consensus 319 ~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~ 348 (348)
T PLN03154 319 SEGLESAPAALVGLFSGKNVGKQVIRVAKE 348 (348)
T ss_pred ccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence 899999999999999999999999998764
No 5
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=1.3e-39 Score=252.51 Aligned_cols=264 Identities=51% Similarity=0.860 Sum_probs=237.5
Q ss_pred cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEE
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECV 83 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~v 83 (269)
+.|.++-..+-|+.+.|++||.|.+..+|+||..++.+.+.+++|...++++....|..++.|||.+|.+.++.++|++|
T Consensus 75 ~~gg~V~~Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~Getv 154 (340)
T COG2130 75 MVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETV 154 (340)
T ss_pred eECCeeEEEEecCCCCCCCCCEEEecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEE
Confidence 45544455567888999999999999999999999999999997666667766889999999999999999999999999
Q ss_pred EEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchhHh
Q 024337 84 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTLD 163 (269)
Q Consensus 84 lI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~ 163 (269)
+|.+|+|++|..+.|+||..|++|+.++.++++.+++.+.+|.+.++||+.+ ++.+.+++..+.++|+.||++|+..+.
T Consensus 155 vVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~D 233 (340)
T COG2130 155 VVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLD 233 (340)
T ss_pred EEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHH
Confidence 9999999999999999999999999999999999999966999999999998 999999999999999999999999999
Q ss_pred hhHhhhhcCCEEEEEeccccccCC-CCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCeeeeeehcc
Q 024337 164 AVLPNMKIRGRIAACGMISQYNLD-KPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKLVYVEDMAE 241 (269)
Q Consensus 164 ~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 241 (269)
..+..|+..+|++.+|..+.|+.. .+..+..+..++.+.+++.|+...+. .....+..+++.+++++|+++...+..-
T Consensus 234 Av~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~d 313 (340)
T COG2130 234 AVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVD 313 (340)
T ss_pred HHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehh
Confidence 999999999999999998888654 33445567788889999999998444 4455589999999999999999887777
Q ss_pred ccccHHHHHHHHhcCCCcceEEEEecC
Q 024337 242 GLESAPAALIGLFSGQNVGKQVVAVAP 268 (269)
Q Consensus 242 ~~~~~~~a~~~~~~~~~~gkvvv~~~~ 268 (269)
.|+++++||..|.+|+.+||.|+++.+
T Consensus 314 GlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 314 GLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhhccHHHHHHHhcCCccceEEEEecC
Confidence 899999999999999999999999864
No 6
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.3e-38 Score=266.37 Aligned_cols=263 Identities=73% Similarity=1.225 Sum_probs=217.3
Q ss_pred cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecC-CceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCE
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITA-PYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGEC 82 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~ 82 (269)
++|.|+++.+|++++.+++||+|+++|+|+||++++. ..++++||++++.+.+++++++++.|||+++.+.+++++|++
T Consensus 75 ~~g~~~~~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~ 154 (338)
T cd08295 75 ITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGET 154 (338)
T ss_pred EeccEEEEEEecCCCCCCCCCEEEecCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCE
Confidence 4567888889999999999999999999999999999 799999556655543578999999999999987789999999
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchhH
Q 024337 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTL 162 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~ 162 (269)
|+|+|++|++|++++|+|+.+|++|+++++++++.+++++.+|+++++++.+..++.+.+++.+++++|++||++|+..+
T Consensus 155 VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~ 234 (338)
T cd08295 155 VFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKML 234 (338)
T ss_pred EEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHH
Confidence 99999999999999999999999999999999999999833999999987542167777777765689999999999889
Q ss_pred hhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccc
Q 024337 163 DAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEG 242 (269)
Q Consensus 163 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 242 (269)
..++++++++|+++.+|..................++.+++++.++....+.....+.++.+++++.+|.+++.+...|+
T Consensus 235 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~ 314 (338)
T cd08295 235 DAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADG 314 (338)
T ss_pred HHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccC
Confidence 99999999999999998643211100001123355667778888766554433345678889999999999987777899
Q ss_pred cccHHHHHHHHhcCCCcceEEEEe
Q 024337 243 LESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 243 ~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
++++++|++.+.+++..||+|+++
T Consensus 315 l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 315 LESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHHhcCCCCceEEEEC
Confidence 999999999999999899999864
No 7
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-38 Score=249.18 Aligned_cols=247 Identities=21% Similarity=0.263 Sum_probs=211.9
Q ss_pred ccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337 5 SGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 5 ~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
|.+|+|.++|++|+++++||||..- |++++|++.++++++++ |++ +
T Consensus 68 EssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KL-Pd~--v 144 (354)
T KOG0024|consen 68 ESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKL-PDN--V 144 (354)
T ss_pred ccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeC-CCC--C
Confidence 6789999999999999999999532 89999999999999999 999 6
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
+++.++|..++.++|+|. +++++++|+++||+|| |++|+.+...||.+|+ +|++++-.++|+++++ +||++.+.+.
T Consensus 145 s~eeGAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~ 221 (354)
T KOG0024|consen 145 SFEEGALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDPS 221 (354)
T ss_pred chhhcccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEeec
Confidence 667899999999999999 6799999999999999 9999999999999999 9999999999999999 8999877665
Q ss_pred CCh---hhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeee
Q 024337 133 KEE---ADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG 207 (269)
Q Consensus 133 ~~~---~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (269)
... .++.+.+++..+. .+|+.|||+|. ..++.++..++.+|++++.+... ....++......+++.+.|
T Consensus 222 ~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~------~~~~fpi~~v~~kE~~~~g 295 (354)
T KOG0024|consen 222 SHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA------EEIQFPIIDVALKEVDLRG 295 (354)
T ss_pred cccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC------CccccChhhhhhheeeeee
Confidence 542 1445556665554 79999999996 88999999999999999988743 2344556678889999999
Q ss_pred eeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCC-cceEEEEecC
Q 024337 208 FIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQN-VGKQVVAVAP 268 (269)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~~~ 268 (269)
+..+. +..+..+++++.+|++. +.++..|+++++.+||+.++++.. .-|+++..++
T Consensus 296 ~fry~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 296 SFRYC-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eeeec-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 87654 55799999999999876 568889999999999999998774 3488877653
No 8
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-38 Score=247.25 Aligned_cols=247 Identities=23% Similarity=0.277 Sum_probs=214.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEE-ec-------------------------------------cceeeEEEecCCceee
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVW-GM-------------------------------------TGWEEYSLITAPYLFK 45 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~-~~-------------------------------------g~~~~~~~v~~~~~~~ 45 (269)
=|++|+|+++|++|+.|++||||= ++ |+||+|+++++.++++
T Consensus 71 HEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~k 150 (360)
T KOG0023|consen 71 HEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIK 150 (360)
T ss_pred ceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEE
Confidence 467888999999999999999991 11 6799999999999999
Q ss_pred cCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Q 024337 46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG 125 (269)
Q Consensus 46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g 125 (269)
+ |+++++. .+|++.|++.|+|.+| ...++.||+++.|.|+ ||+|.+++|+||++|.+|++++++..+.+.+-+.||
T Consensus 151 I-P~~~pl~-~aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG 226 (360)
T KOG0023|consen 151 I-PENLPLA-SAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG 226 (360)
T ss_pred C-CCCCChh-hccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC
Confidence 9 9997776 6999999999999999 5678999999999999 669999999999999999999998866666554899
Q ss_pred CceeEecC-ChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337 126 FDEAFNYK-EEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (269)
Q Consensus 126 ~~~~~~~~-~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (269)
++..++.. ++ ++.+.+.+.+++.+|.+.+. ....++.++++++++|++|.+|.+.. ........+..+.++
T Consensus 227 Ad~fv~~~~d~-d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~ 298 (360)
T KOG0023|consen 227 ADVFVDSTEDP-DIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKS 298 (360)
T ss_pred cceeEEecCCH-HHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEE
Confidence 99888777 55 88999998877777777766 45788999999999999999998642 334455677889999
Q ss_pred eeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP 268 (269)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~ 268 (269)
+.|+..+. ....+++++++.++.+++++. ..+++++++|++.|.+++..+|.||+++.
T Consensus 299 I~GS~vG~-----~ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 299 IKGSIVGS-----RKETQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred EEeecccc-----HHHHHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 99999877 677999999999999998874 67999999999999999999999999864
No 9
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=100.00 E-value=5.7e-37 Score=236.98 Aligned_cols=268 Identities=72% Similarity=1.255 Sum_probs=243.2
Q ss_pred CCcccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCce--eecC-CCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337 2 QPISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYL--FKIQ-HTDVPLSYYTGILGMPGMTAYVGFYEVCSAK 78 (269)
Q Consensus 2 ~~i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~--~~~~-p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (269)
.||+|.|+-..+.++-+++++||.|+++-+|.||.+++++.. ++++ |.++++++-..++..++.|||..+++.+..+
T Consensus 73 ~pi~g~GV~kVi~S~~~~~~~GD~v~g~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk 152 (343)
T KOG1196|consen 73 KPIDGFGVAKVIDSGHPNYKKGDLVWGIVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPK 152 (343)
T ss_pred cEecCCceEEEEecCCCCCCcCceEEEeccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCC
Confidence 368999998888888899999999999999999999988744 4432 4567788668899999999999999999999
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
+|++|+|-||+|++|+++.|+|+.+|+.|+..+.|+++..+++.++|.+..|||.++.+....+++..++++|+.||.+|
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVG 232 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVG 232 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccC
Confidence 99999999999999999999999999999999999999999998999999999999657888888888889999999999
Q ss_pred chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeee
Q 024337 159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVED 238 (269)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 238 (269)
+..+...+..|+..||++.+|..+.++...+....+...++.+++++.|+...++.+...+.+..+..++++|+++..-+
T Consensus 233 G~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~ed 312 (343)
T KOG1196|consen 233 GKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVED 312 (343)
T ss_pred cHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehh
Confidence 99999999999999999999999988887776666788899999999999888888888899999999999999998877
Q ss_pred hccccccHHHHHHHHhcCCCcceEEEEecCC
Q 024337 239 MAEGLESAPAALIGLFSGQNVGKQVVAVAPE 269 (269)
Q Consensus 239 ~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~~ 269 (269)
..-.|++.++||..|.+|+..||.++.+..|
T Consensus 313 i~~Glen~P~A~vglf~GkNvGKqiv~va~E 343 (343)
T KOG1196|consen 313 IADGLENGPSALVGLFHGKNVGKQLVKVARE 343 (343)
T ss_pred HHHHHhccHHHHHHHhccCcccceEEEeecC
Confidence 6678999999999999999999999988753
No 10
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=9e-37 Score=258.12 Aligned_cols=250 Identities=18% Similarity=0.248 Sum_probs=213.3
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW 32 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (269)
-|++|+|+++|++++.+++||+|+.. |+|
T Consensus 67 hE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~ 146 (371)
T cd08281 67 HEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAF 146 (371)
T ss_pred ccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccc
Confidence 46789999999999999999999752 589
Q ss_pred eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337 33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (269)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~ 111 (269)
+||+.++++.++++ |++++.. +++.+++++.+||+++...++++++++|+|.|+ |++|++++|+|+.+|+ +|++++
T Consensus 147 aey~~v~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~ 223 (371)
T cd08281 147 AEYAVVSRRSVVKI-DKDVPLE-IAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVD 223 (371)
T ss_pred eeeEEecccceEEC-CCCCChH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEc
Confidence 99999999999999 9985544 577888899999999877788999999999986 9999999999999999 799999
Q ss_pred CCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCC
Q 024337 112 GSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPE 190 (269)
Q Consensus 112 ~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 190 (269)
.++++.++++ ++|+++++++.+. ++.+.+++.+++++|++|||+|. ..+..++++++++|+++.+|.... ...
T Consensus 224 ~~~~r~~~a~-~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----~~~ 297 (371)
T cd08281 224 LNEDKLALAR-ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDP----EAR 297 (371)
T ss_pred CCHHHHHHHH-HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCC----Cce
Confidence 9999999998 9999999998876 78888888776689999999996 788999999999999999987432 111
Q ss_pred CccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 191 GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
...+...++.+++++.++....+. .++.+..+++++.+|++++ .++++|+|+|+++|++.+.+++..+|+|+
T Consensus 298 ~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 298 LSVPALSLVAEERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred eeecHHHHhhcCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 234556788899999998765432 2456888999999999975 46788999999999999999988877663
No 11
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2.1e-36 Score=253.82 Aligned_cols=262 Identities=39% Similarity=0.681 Sum_probs=209.2
Q ss_pred CcccceEEEEeccCCCCCCCCCeEEec-cceeeEEEecCCceeecCCCCCC---cchhhhhcCCcchhHHHHHHHhhcCC
Q 024337 3 PISGYGVAKVLDSENPEFSKGDLVWGM-TGWEEYSLITAPYLFKIQHTDVP---LSYYTGILGMPGMTAYVGFYEVCSAK 78 (269)
Q Consensus 3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~~~~~p~~~~---~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (269)
..|++|+|+++|++++.|++||+|+++ ++|+||++++++.++++ |++++ +++.+++++.++.|||+++.+.++++
T Consensus 73 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~ 151 (345)
T cd08293 73 VLDGGGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSSLEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHIT 151 (345)
T ss_pred ceEeeEEEEEeccCCCCCCCCCEEEecCCCceeEEEecHHHeEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCC
Confidence 367899999999999999999999988 58999999999999999 87642 22235678889999999997778888
Q ss_pred CC--CEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337 79 HG--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE 155 (269)
Q Consensus 79 ~~--~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 155 (269)
++ ++|||+|++|++|++++|+|+++|+ +|+++++++++.+++++++|+++++++++. ++.+.+++.+++++|++||
T Consensus 152 ~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid 230 (345)
T cd08293 152 PGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFD 230 (345)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEE
Confidence 77 9999999999999999999999999 899999999999998845999999998876 8888888877668999999
Q ss_pred CCCchhHhhhHhhhhcCCEEEEEeccccccCCCCC-Cccc--hHH-HhhcceeeeeeeecccccchHHHHHHHHHHHHCC
Q 024337 156 NVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPE-GVHN--LMY-LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG 231 (269)
Q Consensus 156 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 231 (269)
|+|+..+..++++++++|+++.+|........... .... ... ...+++++.............+.++.+++++.+|
T Consensus 231 ~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 310 (345)
T cd08293 231 NVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEG 310 (345)
T ss_pred CCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCC
Confidence 99997789999999999999999853221000000 0111 111 2234555444433232333456688889999999
Q ss_pred CeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.+++.....++++++++|++.+.+++..||+|+++
T Consensus 311 ~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 311 KLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred CccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 99877666679999999999999998889999874
No 12
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=4.6e-36 Score=251.20 Aligned_cols=244 Identities=23% Similarity=0.275 Sum_probs=207.1
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
-|++|+|+++|++|+.+++||+|+. .|+|+||+.++.+.++++ |++++
T Consensus 60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~-P~~~~ 138 (339)
T cd08239 60 HEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPL-PDDLS 138 (339)
T ss_pred cCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEEC-CCCCC
Confidence 4688999999999999999999975 278999999999999999 98855
Q ss_pred cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEe
Q 024337 53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFN 131 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~ 131 (269)
.. +++++++++.|||+++ ...+++++++|+|+|+ |++|++++|+|+.+|++ |+++++++++.++++ ++|++++++
T Consensus 139 ~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~ 214 (339)
T cd08239 139 FA-DGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVIN 214 (339)
T ss_pred HH-HhhhhcchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEc
Confidence 44 5778899999999999 4578899999999987 99999999999999997 999999999999998 999999999
Q ss_pred cCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337 132 YKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (269)
Q Consensus 132 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (269)
+++. + .+.+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.... .. ......++.+++++.++.
T Consensus 215 ~~~~-~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~-~~~~~~~~~~~~~i~g~~ 286 (339)
T cd08239 215 SGQD-D-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-----LT-IEVSNDLIRKQRTLIGSW 286 (339)
T ss_pred CCcc-h-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-----cc-cCcHHHHHhCCCEEEEEe
Confidence 8875 6 6677777766 89999999998 456889999999999999987432 11 112345778899999887
Q ss_pred ecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 210 VLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
... .+.++.+++++.+|.+++ .++++|+++++++|++.+.++. .||+|+.+
T Consensus 287 ~~~-----~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 287 YFS-----VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred cCC-----HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 643 467899999999998864 6778899999999999998876 68999874
No 13
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=8.3e-36 Score=248.69 Aligned_cols=260 Identities=47% Similarity=0.808 Sum_probs=212.6
Q ss_pred cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCC---ceeecCCCCCCc--c--hhhhhcCCcchhHHHHHHHhhc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAP---YLFKIQHTDVPL--S--YYTGILGMPGMTAYVGFYEVCS 76 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~---~~~~~~p~~~~~--~--~~~a~l~~~~~~a~~~l~~~~~ 76 (269)
+.|.++.+.|-+.++.+++||+|+++++|++|+.++.+ .++++ |++++. + ...+++++++.|||+++.+.++
T Consensus 62 v~G~e~~G~V~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~ 140 (329)
T cd08294 62 MIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLEICK 140 (329)
T ss_pred EecceEEEEEecCCCCCCCCCEEEeeCCeeeEEEECCccccceEEC-CccccccCChHHHHHhcccHHHHHHHHHHHhcC
Confidence 34444444444566789999999999999999999999 99999 988552 1 1235789999999999988889
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
++++++|+|+|++|++|++++|+|+.+|++|+++++++++.++++ ++|+++++++++. ++.+.+++.+++++|++||+
T Consensus 141 ~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vld~ 218 (329)
T cd08294 141 PKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDN 218 (329)
T ss_pred CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEEEC
Confidence 999999999999999999999999999999999999999999999 8999999999876 88888888776689999999
Q ss_pred CCchhHhhhHhhhhcCCEEEEEeccccccCCCCC-CccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee
Q 024337 157 VGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPE-GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY 235 (269)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 235 (269)
+|+..+..++++++++|+++.+|........... .......++.+++++.++....+.....+.++.+++++.+|.+++
T Consensus 219 ~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~ 298 (329)
T cd08294 219 VGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKY 298 (329)
T ss_pred CCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcC
Confidence 9998899999999999999998854321110010 122344567788888887654432334566888999999999988
Q ss_pred eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 236 VEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
....+++++++++|++.+.+++..||+++++
T Consensus 299 ~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 299 REHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred CcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 7667899999999999999999899999864
No 14
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=2e-36 Score=239.02 Aligned_cols=248 Identities=23% Similarity=0.255 Sum_probs=213.1
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW 32 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (269)
=||+|+|++||++|++++|||+|+.. ++|
T Consensus 61 HEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stF 140 (366)
T COG1062 61 HEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTF 140 (366)
T ss_pred cccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccc
Confidence 38999999999999999999999543 389
Q ss_pred eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337 33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (269)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~ 111 (269)
+||.++++..+.++ +...|+. .++.+.|...|.+-++.+.+++++|+++.|+|. |++|++++|-|+..|+ ++++++
T Consensus 141 a~y~vv~~~s~vki-~~~~p~~-~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD 217 (366)
T COG1062 141 AEYTVVHEISLVKI-DPDAPLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVD 217 (366)
T ss_pred hhheeecccceEEC-CCCCCcc-ceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEe
Confidence 99999999999999 5554444 477889999999999989999999999999998 9999999999999999 999999
Q ss_pred CCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCC
Q 024337 112 GSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPE 190 (269)
Q Consensus 112 ~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 190 (269)
.+++++++++ +||+++.+|.++..+..+.+++++++++|++|||+|+ ..++.++++..++|+.+.+|.... ...
T Consensus 218 ~~~~Kl~~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~----~~~ 292 (366)
T COG1062 218 INPEKLELAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA----GQE 292 (366)
T ss_pred CCHHHHHHHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC----Cce
Confidence 9999999999 9999999998875248899999999899999999998 899999999999999999998542 122
Q ss_pred CccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceE
Q 024337 191 GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQ 262 (269)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkv 262 (269)
....+..+... .++.|+..+.... +.++..++++..+|++.. .+++.++|+|++|||+.|.+|+....+
T Consensus 293 i~~~~~~lv~g-r~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~V 363 (366)
T COG1062 293 ISTRPFQLVTG-RVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSV 363 (366)
T ss_pred eecChHHeecc-ceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEE
Confidence 22344455554 8888888776532 567999999999998875 577789999999999999999977443
No 15
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.6e-35 Score=246.53 Aligned_cols=257 Identities=44% Similarity=0.719 Sum_probs=205.8
Q ss_pred cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCceeecC---CCCCCcchhh-hhcCCcchhHHHHHHHhhcCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQ---HTDVPLSYYT-GILGMPGMTAYVGFYEVCSAKH 79 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~---p~~~~~~~~~-a~l~~~~~~a~~~l~~~~~~~~ 79 (269)
.+++|+|.++| +.+++||+|+++++|++|+.++.+.+.+++ |++++.. ++ +++++++.|||+++.+.+++++
T Consensus 63 ~~~~g~v~~~~---~~~~~GdrV~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~-~aaa~l~~~~~TA~~~l~~~~~~~~ 138 (325)
T TIGR02825 63 QQVARVVESKN---VALPKGTIVLASPGWTSHSISDGKDLEKLLTEWPDTLPLS-LALGTVGMPGLTAYFGLLEICGVKG 138 (325)
T ss_pred ceEEEEEEeCC---CCCCCCCEEEEecCceeeEEechhheEEccccccCCCCHH-HHHHhcccHHHHHHHHHHHHhCCCC
Confidence 45566666655 469999999999999999999998876652 5664333 34 6799999999999988899999
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG 159 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 159 (269)
+++|||+|++|++|++++|+|+.+|++|+++++++++.++++ ++|++.++++++..++.+.++..+++++|++|||+|+
T Consensus 139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~ 217 (325)
T TIGR02825 139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGG 217 (325)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCH
Confidence 999999999999999999999999999999999999999998 8999999998763145555666655589999999999
Q ss_pred hhHhhhHhhhhcCCEEEEEeccccccCCCCCC-ccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCeeeee
Q 024337 160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEG-VHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKLVYVE 237 (269)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~ 237 (269)
..+..++++++++|+++.+|............ ......++.+++++.++....+ .....+.++++++++.+|.+++.+
T Consensus 218 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~ 297 (325)
T TIGR02825 218 EFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKE 297 (325)
T ss_pred HHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccce
Confidence 88899999999999999998643211100111 1123456667888887765433 223356788999999999999887
Q ss_pred ehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 238 DMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 238 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
...|+++++++|++.+.+++..||+|++
T Consensus 298 ~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 298 YVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred eccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 7889999999999999999989999973
No 16
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.7e-35 Score=249.20 Aligned_cols=250 Identities=19% Similarity=0.242 Sum_probs=210.6
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-------------------------------------------ccceeeEEEecC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------------------MTGWEEYSLITA 40 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------------------~g~~~~~~~v~~ 40 (269)
-|++|+|+++|++++.+++||+|+. .|+|+||+.+++
T Consensus 60 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~ 139 (358)
T TIGR03451 60 HEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHA 139 (358)
T ss_pred cceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEeh
Confidence 4678999999999999999999974 278999999999
Q ss_pred CceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Q 024337 41 PYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDL 119 (269)
Q Consensus 41 ~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~ 119 (269)
++++++ |++++.. +++.+++.+.++|+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++
T Consensus 140 ~~~~~i-p~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~ 216 (358)
T TIGR03451 140 GQCTKV-DPAADPA-AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEW 216 (358)
T ss_pred hheEEC-CCCCChh-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 999999 8885443 577888899999998877788999999999986 9999999999999999 59999999999999
Q ss_pred HHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHH
Q 024337 120 LKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMY 197 (269)
Q Consensus 120 ~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 197 (269)
++ ++|+++++++.+. ++.+.+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.... ......++..
T Consensus 217 ~~-~~Ga~~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~----~~~~~~~~~~ 290 (358)
T TIGR03451 217 AR-EFGATHTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTP----DMTLELPLLD 290 (358)
T ss_pred HH-HcCCceEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC----CceeeccHHH
Confidence 98 9999999998876 788888888876 89999999997 788999999999999999987432 1112344567
Q ss_pred HhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 198 LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
++.+++++.+++..... ..+.++.+++++++|.+++ .++++|+++|+++|++.+.+++.. |+++.
T Consensus 291 ~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 291 VFGRGGALKSSWYGDCL--PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HhhcCCEEEEeecCCCC--cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 77888988887643221 2566888999999999975 577889999999999999988765 77664
No 17
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=2.3e-35 Score=245.49 Aligned_cols=251 Identities=21% Similarity=0.255 Sum_probs=209.7
Q ss_pred cccceEEEEeccCCCC-CCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337 4 ISGYGVAKVLDSENPE-FSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK 78 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~-~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (269)
-|++|+|+++|+++++ |++||+|+++ |+|+||+.++.+.++++ |++++.. ++++++..+.|||.++ ...++
T Consensus 66 ~e~~G~V~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~- 141 (324)
T cd08291 66 FEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPL-PDGVSFE-QGASSFVNPLTALGML-ETARE- 141 (324)
T ss_pred cceEEEEEEECCCccccCCCCCEEEecCCCCCcchheeeecHHHeEEC-CCCCCHH-HHhhhcccHHHHHHHH-Hhhcc-
Confidence 4678999999999996 9999999986 89999999999999999 8885544 4677888889998655 45555
Q ss_pred CCCEEEEe-cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337 79 HGECVFIS-AASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFEN 156 (269)
Q Consensus 79 ~~~~vlI~-ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~ 156 (269)
+++.++|+ +++|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++++.. ++.+.+++.+++ ++|++|||
T Consensus 142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid~ 219 (324)
T cd08291 142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFDA 219 (324)
T ss_pred CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEEC
Confidence 45556665 78899999999999999999999999999999999 8999999998876 888888888776 89999999
Q ss_pred CCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHCCCeee
Q 024337 157 VGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-HLYPKFLEMIIPHIKEGKLVY 235 (269)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 235 (269)
+|+......+++++++|+++.+|..... .....+...++.+++++.++....+. ....+.++.+++++. +.+++
T Consensus 220 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 294 (324)
T cd08291 220 VGGGLTGQILLAMPYGSTLYVYGYLSGK----LDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKT 294 (324)
T ss_pred CCcHHHHHHHHhhCCCCEEEEEEecCCC----CcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccccc
Confidence 9998888889999999999999875421 11123345677889999888876542 223567888888888 99999
Q ss_pred eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 236 VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
.+.++|+|+|+++|++.+.+++..||+++.
T Consensus 295 ~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 295 TFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred ceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 999999999999999999999989999873
No 18
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=5.7e-35 Score=247.17 Aligned_cols=251 Identities=20% Similarity=0.239 Sum_probs=209.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW 32 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (269)
-|++|+|+++|++++.+++||+|++. |+|
T Consensus 69 hE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~ 148 (378)
T PLN02827 69 HEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSF 148 (378)
T ss_pred ccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccc
Confidence 47899999999999999999999853 689
Q ss_pred eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337 33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (269)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~ 111 (269)
+||+.++++.++++ |++++.. +++.+++++.++|+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ .|++++
T Consensus 149 aeyv~v~~~~~~~i-P~~l~~~-~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~ 225 (378)
T PLN02827 149 SEYTVVHSGCAVKV-DPLAPLH-KICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVD 225 (378)
T ss_pred eeeEEechhheEEC-CCCCCHH-HhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC
Confidence 99999999999999 9985543 477788888999988767788999999999986 9999999999999999 588888
Q ss_pred CCHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCCC
Q 024337 112 GSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLDK 188 (269)
Q Consensus 112 ~s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 188 (269)
+++++.++++ ++|+++++++.+. .++.+.+++.+++++|++|||+|. ..+..+++.++++ |+++.+|....
T Consensus 226 ~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~----- 299 (378)
T PLN02827 226 INPEKAEKAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA----- 299 (378)
T ss_pred CCHHHHHHHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-----
Confidence 8999999998 9999989987651 156677777776689999999997 5789999999998 99999987432
Q ss_pred CCCccc-hHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 189 PEGVHN-LMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 189 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
. .... ...++.+++++.|+....+. ....++.+++++.+|++++ .++++|+|+++++|++.+.+++. +|+||+
T Consensus 300 ~-~~~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~ 375 (378)
T PLN02827 300 K-PEVSAHYGLFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIH 375 (378)
T ss_pred C-ccccccHHHHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEE
Confidence 1 1122 23567789999988765432 2446788999999999988 68889999999999999998876 699998
Q ss_pred ec
Q 024337 266 VA 267 (269)
Q Consensus 266 ~~ 267 (269)
+.
T Consensus 376 ~~ 377 (378)
T PLN02827 376 MP 377 (378)
T ss_pred ec
Confidence 74
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=6.3e-35 Score=245.52 Aligned_cols=243 Identities=17% Similarity=0.228 Sum_probs=200.1
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe--------------------------------------ccceeeEEEecCCceee
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------MTGWEEYSLITAPYLFK 45 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~ 45 (269)
-|++|+|+++|++|+.+++||+|+. .|+|+||++++.+.+++
T Consensus 72 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~ 151 (360)
T PLN02586 72 HEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLR 151 (360)
T ss_pred cceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeee
Confidence 4678999999999999999999963 27899999999999999
Q ss_pred cCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHc
Q 024337 46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD-LLKNKF 124 (269)
Q Consensus 46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~-~~~~~~ 124 (269)
+ |++++.. ++|++++.+.|+|+++.....++++++|+|.|+ |++|++++|+||.+|++|++++.++++.. .++ ++
T Consensus 152 l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~-~~ 227 (360)
T PLN02586 152 F-PDNLPLD-AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN-RL 227 (360)
T ss_pred C-CCCCCHH-HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH-hC
Confidence 9 9985554 578899999999999966666789999999886 99999999999999999998887766654 445 89
Q ss_pred CCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcce
Q 024337 125 GFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRL 203 (269)
Q Consensus 125 g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 203 (269)
|+++++++.+. +.+++.++ ++|++||++|. ..+..++++++++|+++.+|.... ....++..++.++.
T Consensus 228 Ga~~vi~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~ 296 (360)
T PLN02586 228 GADSFLVSTDP----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRK 296 (360)
T ss_pred CCcEEEcCCCH----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCe
Confidence 99988886653 23444443 69999999997 678999999999999999986421 12344556667777
Q ss_pred eeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337 204 RMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (269)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 267 (269)
.+.++.... .+.++++++++++|++++.+ ++|+|+|+++|++.+.+++..||+|+.+.
T Consensus 297 ~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 354 (360)
T PLN02586 297 LVGGSDIGG-----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDVA 354 (360)
T ss_pred EEEEcCcCC-----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 777766543 45688999999999999876 47999999999999999998899999863
No 20
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=5.5e-35 Score=244.80 Aligned_cols=240 Identities=18% Similarity=0.213 Sum_probs=200.5
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-----------------------------------ccceeeEEEecCCceeecCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-----------------------------------MTGWEEYSLITAPYLFKIQH 48 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~~p 48 (269)
-|++|+|+++ +++.|++||+|+. .|+|+||++++++.++++ |
T Consensus 65 hE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~-P 141 (343)
T PRK09880 65 HEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPY-P 141 (343)
T ss_pred cccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEEC-C
Confidence 5788999999 7889999999973 278999999999999999 8
Q ss_pred CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD 127 (269)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~ 127 (269)
++ ++++++++..++.++|+++.+ ....++++|+|+|+ |++|++++|+|+.+|+ +|++++++++++++++ ++|++
T Consensus 142 ~~--l~~~~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~ 216 (343)
T PRK09880 142 EK--ADEKVMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGAD 216 (343)
T ss_pred CC--CCHHHHHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCc
Confidence 88 444566778889999999954 56678999999997 9999999999999999 7999999999999999 89999
Q ss_pred eeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeee
Q 024337 128 EAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRME 206 (269)
Q Consensus 128 ~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (269)
+++|+++. ++.+.. +. .+++|++|||+|. ..+..++++++++|+++.+|.... ....++..++.+++++.
T Consensus 217 ~vi~~~~~-~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~ 287 (343)
T PRK09880 217 KLVNPQND-DLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLK 287 (343)
T ss_pred EEecCCcc-cHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEE
Confidence 99998775 544322 22 2369999999997 678999999999999999987431 22345667788999998
Q ss_pred eeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 207 GFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
++... .+.++.+++++.+|.+++ .++++|+|+|+++|++.+.+++..||+++.+
T Consensus 288 g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 288 GSFRF------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred EEeec------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 87642 346888999999999975 5678899999999999999888789999864
No 21
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1e-34 Score=243.67 Aligned_cols=252 Identities=22% Similarity=0.238 Sum_probs=203.8
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
-|++|+|+++|++++.|++||+|+++ |+|+||+.++.+.++++ |++ +
T Consensus 59 ~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~l-P~~--~ 135 (347)
T PRK10309 59 HEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFAL-PTD--M 135 (347)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEEC-cCC--C
Confidence 47889999999999999999999862 78999999999999999 888 4
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
+++.|++..++.++|+++ +...++++++|+|+|+ |++|++++|+|+.+|++ |+++++++++.++++ ++|+++++++
T Consensus 136 s~~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~ 212 (347)
T PRK10309 136 PIEDGAFIEPITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNS 212 (347)
T ss_pred CHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecC
Confidence 444444444566788886 5678899999999986 99999999999999996 788988999999998 9999999988
Q ss_pred CChhhHHHHHHHHCCC-Ccc-EEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337 133 KEEADLNAALKRYFPE-GID-VYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~-~~d-~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (269)
++. + .+.+.+.+.+ ++| ++|||+|+ ..+..++++++++|+++.+|..... .......+..++.+++++.++.
T Consensus 213 ~~~-~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~---~~~~~~~~~~~~~~~~~i~g~~ 287 (347)
T PRK10309 213 REM-S-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD---LHLTSATFGKILRKELTVIGSW 287 (347)
T ss_pred ccc-C-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC---cccChhhhhHHhhcCcEEEEEe
Confidence 765 5 5556666665 898 99999997 6889999999999999999875320 0111112345778899999876
Q ss_pred ecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 210 VLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.........+.++.+++++.+|.++ +.++++|+|+|+++|++.+.+++..||+|+.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 288 MNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred ccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 6432112246788899999999885 56788899999999999999988889999976
No 22
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.9e-34 Score=244.59 Aligned_cols=250 Identities=18% Similarity=0.224 Sum_probs=205.7
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe------------------------------------------------------c
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------------------------------M 29 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------------------------------~ 29 (269)
-|++|+|+++|++++.+++||+|++ .
T Consensus 71 hE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 150 (381)
T PLN02740 71 HEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNT 150 (381)
T ss_pred ccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccC
Confidence 4789999999999999999999974 2
Q ss_pred cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEE
Q 024337 30 TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVV 108 (269)
Q Consensus 30 g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~ 108 (269)
|+|+||+.++.+.++++ |++++.. ++|.+++++.|||+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|+
T Consensus 151 G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi 227 (381)
T PLN02740 151 STFTEYTVLDSACVVKI-DPNAPLK-KMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKII 227 (381)
T ss_pred ccceeEEEEehHHeEEC-CCCCCHH-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEE
Confidence 68999999999999999 8885544 477888999999999877789999999999997 9999999999999999 699
Q ss_pred EEeCCHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEecccccc
Q 024337 109 GSAGSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYN 185 (269)
Q Consensus 109 ~~~~s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~ 185 (269)
++++++++.++++ ++|+++++|+.+. .++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|....
T Consensus 228 ~~~~~~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~-- 304 (381)
T PLN02740 228 GVDINPEKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPT-- 304 (381)
T ss_pred EEcCChHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCC--
Confidence 9999999999998 9999989987753 136777877776589999999997 7889999999996 99999987532
Q ss_pred CCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEE
Q 024337 186 LDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQV 263 (269)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv 263 (269)
.....+....+ .++.++.|+....+.. ...++.+++++.++.+++ .++++|+|+|+++|++.+.+++. .|++
T Consensus 305 --~~~~~~~~~~~-~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~ 378 (381)
T PLN02740 305 --PKMLPLHPMEL-FDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCL 378 (381)
T ss_pred --CceecccHHHH-hcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEE
Confidence 11111222223 3678888877654322 356888999999998864 57789999999999999988875 4888
Q ss_pred EE
Q 024337 264 VA 265 (269)
Q Consensus 264 v~ 265 (269)
++
T Consensus 379 ~~ 380 (381)
T PLN02740 379 LH 380 (381)
T ss_pred Ee
Confidence 86
No 23
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.8e-34 Score=242.35 Aligned_cols=243 Identities=18% Similarity=0.218 Sum_probs=201.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe--------------------------------------ccceeeEEEecCCceee
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------MTGWEEYSLITAPYLFK 45 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~ 45 (269)
-|++|+|+++|++++.+++||+|+. .|+|+||++++++.+++
T Consensus 66 hE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~ 145 (375)
T PLN02178 66 HEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLS 145 (375)
T ss_pred ceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEE
Confidence 3678999999999999999999963 27899999999999999
Q ss_pred cCCCCCCcchhhhhcCCcchhHHHHHHHhhc-CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHH
Q 024337 46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCS-AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKNK 123 (269)
Q Consensus 46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~-~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-~~~~~~~ 123 (269)
+ |++++.. +++++++.+.|+|+++..... .+++++|+|.|+ |++|++++|+|+.+|++|++++.++++ .+.++ +
T Consensus 146 l-P~~ls~~-~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~ 221 (375)
T PLN02178 146 I-PDGLPSD-SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-R 221 (375)
T ss_pred C-CCCCCHH-HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-h
Confidence 9 9985544 477889999999999855432 368999999987 999999999999999999999877554 67777 9
Q ss_pred cCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcc
Q 024337 124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKR 202 (269)
Q Consensus 124 ~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 202 (269)
+|+++++++.+. +.+.+.++ ++|++|||+|. ..+..++++++++|+++.+|.... ....+...++.++
T Consensus 222 lGa~~~i~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~ 290 (375)
T PLN02178 222 LGADSFLVTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLGR 290 (375)
T ss_pred CCCcEEEcCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhCC
Confidence 999988886642 24444443 69999999997 478999999999999999986421 1234556777889
Q ss_pred eeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337 203 LRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (269)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 267 (269)
+++.|+.... .+.+.++++++.+|++++.+ ++|+|+|+++|++.+.+++..||+|+.+.
T Consensus 291 ~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 349 (375)
T PLN02178 291 KMVGGSQIGG-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDVA 349 (375)
T ss_pred eEEEEeCccC-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence 9998877644 45688899999999999877 46999999999999999998899999873
No 24
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=3.8e-34 Score=241.64 Aligned_cols=251 Identities=20% Similarity=0.229 Sum_probs=202.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW 32 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (269)
-|++|+|+++|++++.+++||+|+.. |+|
T Consensus 61 hE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~ 140 (368)
T TIGR02818 61 HEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTF 140 (368)
T ss_pred cccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccc
Confidence 57899999999999999999999752 489
Q ss_pred eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337 33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (269)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~ 111 (269)
+||+++|.++++++ |++++.. ++|++++++.+||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus 141 aey~~v~~~~~~~l-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~ 217 (368)
T TIGR02818 141 SEYTVVPEISLAKI-NPAAPLE-EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAID 217 (368)
T ss_pred eeeEEechhheEEC-CCCCCHH-HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Confidence 99999999999999 9885544 578888999999999877788999999999986 9999999999999999 899999
Q ss_pred CCHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCCC
Q 024337 112 GSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLDK 188 (269)
Q Consensus 112 ~s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 188 (269)
+++++.++++ ++|+++++|+.+. .++.+.+.+.+++++|++|||+|. ..+..++++++++ |+++.+|.... .
T Consensus 218 ~~~~~~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~----~ 292 (368)
T TIGR02818 218 INPAKFELAK-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGA----G 292 (368)
T ss_pred CCHHHHHHHH-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCC----C
Confidence 9999999998 9999989987641 146677777776689999999996 7789999999886 99999987431 0
Q ss_pred CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.........++. +..+.++..... ..+..+.++++++.+|.++ +.++++|+|+|+++|++.+.+++. .|+++.+
T Consensus 293 ~~~~~~~~~~~~-~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 293 QEISTRPFQLVT-GRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred CcccccHHHHhc-cceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 111122233332 334556543321 1245688899999999875 457889999999999999988764 5988864
No 25
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=8.2e-35 Score=239.74 Aligned_cols=258 Identities=26% Similarity=0.369 Sum_probs=201.5
Q ss_pred cccceEEEE---ec-cCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh-
Q 024337 4 ISGYGVAKV---LD-SENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC- 75 (269)
Q Consensus 4 i~~~G~v~~---vg-~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~- 75 (269)
.+|.|++.. +| ..+.....||.++.. |+|+||.++|...++++ |+++++. ++|++|.++.|||.+|...+
T Consensus 71 ~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~-P~~l~~~-~aa~~p~~~~tA~~al~~~~~ 148 (347)
T KOG1198|consen 71 RDGSGVVGAVESVGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKI-PESLSFE-EAAALPLAALTALSALFQLAP 148 (347)
T ss_pred cccCCceeEEeccccccccceEeeeEEeeccCCCceeeEEEcchhhccCC-CCccChh-hhhcCchHHHHHHHHHHhccc
Confidence 445555433 34 334456777777766 89999999999999999 9996655 68899999999999999988
Q ss_pred -----cCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCC
Q 024337 76 -----SAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEG 149 (269)
Q Consensus 76 -----~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~ 149 (269)
+++++++|||+||+|++|++++|+|+++|+ +|++++ +++++++++ ++|+++++||++. ++.+.+++.++++
T Consensus 149 ~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~-s~e~~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~~ 225 (347)
T KOG1198|consen 149 GKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC-SKEKLELVK-KLGADEVVDYKDE-NVVELIKKYTGKG 225 (347)
T ss_pred cccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc-ccchHHHHH-HcCCcEeecCCCH-HHHHHHHhhcCCC
Confidence 899999999999999999999999999995 555555 999999999 9999999999998 9999999988459
Q ss_pred ccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhh---cceeeeeeeecc-cccchHHHHHHHH
Q 024337 150 IDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS---KRLRMEGFIVLD-HYHLYPKFLEMII 225 (269)
Q Consensus 150 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~ 225 (269)
||+||||+|+........++..+|+...++............ ..+..+.. ....+.+..... .....++.++.+.
T Consensus 226 ~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 304 (347)
T KOG1198|consen 226 VDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLD-DLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALV 304 (347)
T ss_pred ccEEEECCCCCccccchhhhccCCceEEEEeccccccccccc-cchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHH
Confidence 999999999988888899999888765555544321111111 11110111 111111111111 1345578899999
Q ss_pred HHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337 226 PHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (269)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 267 (269)
++++++++++.+.+.||++++.+|++.+.+++..||++++++
T Consensus 305 ~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 305 ELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred HHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 999999999999999999999999999999999999999876
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=5.7e-34 Score=236.99 Aligned_cols=236 Identities=17% Similarity=0.115 Sum_probs=199.0
Q ss_pred CcccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCC
Q 024337 3 PISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDV 51 (269)
Q Consensus 3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~ 51 (269)
..|++|+|+++|++++++++||+|+. .|+|+||+.++.++++++ |+++
T Consensus 61 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~l-P~~~ 139 (329)
T TIGR02822 61 GHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRL-PTGY 139 (329)
T ss_pred CcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEEC-CCCC
Confidence 35789999999999999999999963 278999999999999999 8885
Q ss_pred CcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337 52 PLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN 131 (269)
Q Consensus 52 ~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~ 131 (269)
+.. +++++++++.|||+++. .++++++++|+|+|+ |++|++++|+|+.+|++|+++++++++.++++ ++|+++++|
T Consensus 140 ~~~-~aa~l~~~~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~ 215 (329)
T TIGR02822 140 DDV-ELAPLLCAGIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGG 215 (329)
T ss_pred CHH-HhHHHhccchHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceecc
Confidence 544 57889999999999994 578999999999998 99999999999999999999999999999999 999999887
Q ss_pred cCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337 132 YKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (269)
Q Consensus 132 ~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (269)
..+. . .+++|+++++.+. ..+..++++++++|+++.+|.... .....++..++.+++++.++..
T Consensus 216 ~~~~-~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~-----~~~~~~~~~~~~~~~~i~g~~~ 280 (329)
T TIGR02822 216 AYDT-P---------PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLT-----DTPPLNYQRHLFYERQIRSVTS 280 (329)
T ss_pred cccc-C---------cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCc-----cCCCCCHHHHhhCCcEEEEeec
Confidence 5431 1 1268999998875 788999999999999999987422 1123445566778888888764
Q ss_pred cccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 211 LDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
.. ++.+.++++++++|++++ ++++|+|+|+++|++.+.+++..||+|+
T Consensus 281 ~~-----~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 281 NT-----RADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred CC-----HHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 33 456788899999999975 5678999999999999999999999987
No 27
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=7.8e-34 Score=240.19 Aligned_cols=249 Identities=19% Similarity=0.249 Sum_probs=204.9
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec----------------------------------------------------cc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------------------------------------TG 31 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------g~ 31 (269)
.|++|+|+++|++++++++||+|+.+ |+
T Consensus 62 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~ 141 (369)
T cd08301 62 HEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTST 141 (369)
T ss_pred cccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeecccc
Confidence 57899999999999999999999853 57
Q ss_pred eeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024337 32 WEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS 110 (269)
Q Consensus 32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~ 110 (269)
|+||+.++..+++++ |++++.. +++.+++++.++|+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|+++
T Consensus 142 ~aey~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~ 218 (369)
T cd08301 142 FSEYTVVHVGCVAKI-NPEAPLD-KVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGV 218 (369)
T ss_pred ceeEEEEecccEEEC-CCCCCHH-HhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence 999999999999999 8885543 577888899999999877789999999999986 9999999999999999 89999
Q ss_pred eCCHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCC
Q 024337 111 AGSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLD 187 (269)
Q Consensus 111 ~~s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 187 (269)
++++++.++++ ++|++.++++... .++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|.....
T Consensus 219 ~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~--- 294 (369)
T cd08301 219 DLNPSKFEQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD--- 294 (369)
T ss_pred cCCHHHHHHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC---
Confidence 99999999998 9999888887651 156677777776689999999997 6788899999996 999999875421
Q ss_pred CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
.........++ +++++.++...++. .+..++.+++++.++.+++ .++++|+|+|+++|++.+.+++.. |+++
T Consensus 295 -~~~~~~~~~~~-~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 295 -AVFSTHPMNLL-NGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred -cccccCHHHHh-cCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 11122333343 68889888765432 2456888999999998764 467889999999999999998864 8776
No 28
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=7.6e-34 Score=240.02 Aligned_cols=250 Identities=23% Similarity=0.293 Sum_probs=202.6
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW 32 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (269)
.|++|+|+++|+++++|++||+|++. |+|
T Consensus 62 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~ 141 (368)
T cd08300 62 HEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTF 141 (368)
T ss_pred cceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccc
Confidence 57899999999999999999999753 479
Q ss_pred eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337 33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (269)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~ 111 (269)
+||+.++.+.++++ |++++.. +++.+++++.++|+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|++++
T Consensus 142 aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~ 218 (368)
T cd08300 142 SEYTVVAEISVAKI-NPEAPLD-KVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGID 218 (368)
T ss_pred eeEEEEchhceEeC-CCCCChh-hhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Confidence 99999999999999 9885544 577888899999999877788999999999986 9999999999999999 799999
Q ss_pred CCHHHHHHHHHHcCCceeEecCChh-hHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCCC
Q 024337 112 GSKDKVDLLKNKFGFDEAFNYKEEA-DLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLDK 188 (269)
Q Consensus 112 ~s~~~~~~~~~~~g~~~~~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 188 (269)
+++++.++++ ++|+++++|+++.+ ++.+.+.+.+++++|++|||+|+ ..+..++++++++ |+++.+|.... .
T Consensus 219 ~~~~~~~~~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~----~ 293 (368)
T cd08300 219 INPDKFELAK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAA----G 293 (368)
T ss_pred CCHHHHHHHH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCC----C
Confidence 9999999998 99999999887531 47777877776689999999997 6889999999886 99999987431 0
Q ss_pred CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
.........+. .+..+.++....+. ..+.+..+++++.+|++++ .++++|+|+|+++|++.+.+++. .|++++
T Consensus 294 ~~~~~~~~~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 294 QEISTRPFQLV-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred CccccCHHHHh-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 11112222233 23455555544332 2566888999999998875 47789999999999999988765 588764
No 29
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=8.3e-34 Score=236.13 Aligned_cols=252 Identities=19% Similarity=0.227 Sum_probs=214.7
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG 80 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (269)
.|++|+|+++|++++.+++||+|+++ |+|++|+.++...++++ |++++.. +++.++..+.++|+++ ..++++++
T Consensus 64 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g 140 (324)
T cd08292 64 SEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPL-PDGISDE-VAAQLIAMPLSALMLL-DFLGVKPG 140 (324)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEEC-CCCCCHH-HhhhccccHHHHHHHH-HhhCCCCC
Confidence 47889999999999999999999985 79999999999999999 9885443 4778888899999998 55889999
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG 159 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 159 (269)
++|+|+|++|++|++++|+|+++|++++++++++++.+.++ ++|+++++++++. ++.+.+.+.+++ ++|++|||+|+
T Consensus 141 ~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~ 218 (324)
T cd08292 141 QWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVGG 218 (324)
T ss_pred CEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCCC
Confidence 99999999999999999999999999999999999999998 7899888888876 788888888877 99999999999
Q ss_pred hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHHHCCCee
Q 024337 160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGKLV 234 (269)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~ 234 (269)
.....++++++++|+++.+|.... ......+...+.+++++.++....+ +....+.+..+++++.+|.+.
T Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~ 293 (324)
T cd08292 219 KLAGELLSLLGEGGTLVSFGSMSG-----EPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLL 293 (324)
T ss_pred hhHHHHHHhhcCCcEEEEEecCCC-----CCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence 888899999999999999986421 1122344456678999988876543 223456788999999999998
Q ss_pred eeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
+.+.+.|+++++.+|++.+.++...+|++++
T Consensus 294 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 294 LPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred CccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 7667789999999999999988778898863
No 30
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=5.3e-34 Score=219.34 Aligned_cols=255 Identities=23% Similarity=0.293 Sum_probs=209.9
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH 79 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~ 79 (269)
=||.|.|+.+|++++.|++||+|+.. |+|++|.+.+++.++++ ++.+++. .||++....+|||.+|.+.-++++
T Consensus 83 nEGv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~v-d~~~pl~-~AAT~~VNP~TAyrmL~dfv~L~~ 160 (354)
T KOG0025|consen 83 NEGVGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKV-DKDIPLA-SAATLSVNPCTAYRMLKDFVQLNK 160 (354)
T ss_pred CcceEEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccceEEc-CCcCChh-hhheeccCchHHHHHHHHHHhcCC
Confidence 47889999999999999999999876 89999999999999999 8887776 699999999999999988899999
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCC-CccEEEe
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFE 155 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid 155 (269)
||+|+..||++++|.+++|+|+++|.+-+-+.|+..+++.+++ .+|++++|...+. .-.+..+..... ++.+.||
T Consensus 161 GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel-~~~~~~k~~~~~~~prLalN 239 (354)
T KOG0025|consen 161 GDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL-RDRKMKKFKGDNPRPRLALN 239 (354)
T ss_pred CCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh-cchhhhhhhccCCCceEEEe
Confidence 9999999999999999999999999999999988776655433 7899999864432 111112222233 7899999
Q ss_pred CCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc------ccchHHHHHHHHHHHH
Q 024337 156 NVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH------YHLYPKFLEMIIPHIK 229 (269)
Q Consensus 156 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 229 (269)
|+|+.......+.|..+|.++.+|..+. .........++++++++.|+++..| ++...+.+.++.+++.
T Consensus 240 cVGGksa~~iar~L~~GgtmvTYGGMSk-----qPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~ 314 (354)
T KOG0025|consen 240 CVGGKSATEIARYLERGGTMVTYGGMSK-----QPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYR 314 (354)
T ss_pred ccCchhHHHHHHHHhcCceEEEecCccC-----CCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHH
Confidence 9999998999999999999999998764 2333445678899999999999887 3344567899999999
Q ss_pred CCCeeeeeehccccccHHHHHHHHhcCC-CcceEEEEe
Q 024337 230 EGKLVYVEDMAEGLESAPAALIGLFSGQ-NVGKQVVAV 266 (269)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~ 266 (269)
.|++..+.....+|++...|++...+.. ..||-++.+
T Consensus 315 ~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 315 RGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred cCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 9999988888889999999988665543 335655554
No 31
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.2e-33 Score=237.27 Aligned_cols=246 Identities=19% Similarity=0.231 Sum_probs=204.4
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCC----
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHT---- 49 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~---- 49 (269)
-|++|+|+++|++++.+ +||+|+. .|+|+||+.++.+.++++ |+
T Consensus 59 hE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~i-p~~~~~ 136 (349)
T TIGR03201 59 HEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVV-DEARLA 136 (349)
T ss_pred ccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEEC-Cccccc
Confidence 47899999999999887 9999975 279999999999999999 76
Q ss_pred --CCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc
Q 024337 50 --DVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD 127 (269)
Q Consensus 50 --~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~ 127 (269)
+++.. .++++++++.++|+++. ..+++++++|+|+|+ |++|++++|+|+.+|++|+++++++++.++++ ++|++
T Consensus 137 ~~~~~~~-~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~ 212 (349)
T TIGR03201 137 AAGLPLE-HVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGAD 212 (349)
T ss_pred ccCCCHH-HhhhhcchHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCc
Confidence 64433 47788899999999995 478999999999999 99999999999999999999999999999998 89999
Q ss_pred eeEecCCh--hhHHHHHHHHCCC-Ccc----EEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHh
Q 024337 128 EAFNYKEE--ADLNAALKRYFPE-GID----VYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLV 199 (269)
Q Consensus 128 ~~~~~~~~--~~~~~~i~~~~~~-~~d----~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 199 (269)
+++++.+. .++.+.+++.+++ ++| ++|||+|+ ..+..++++++++|+++.+|.... ....++..++
T Consensus 213 ~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~ 286 (349)
T TIGR03201 213 LTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA------KTEYRLSNLM 286 (349)
T ss_pred eEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC------CcccCHHHHh
Confidence 88887653 1466677777776 776 89999997 667789999999999999987532 1234455667
Q ss_pred hcceeeeeeeecccccchHHHHHHHHHHHHCCCeeee-eehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 200 SKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV-EDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.++.++.+++... .+.++.+++++++|.+++. +.+.|+|+++++||+.+.+++..||+++++
T Consensus 287 ~~~~~~~g~~~~~-----~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 287 AFHARALGNWGCP-----PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred hcccEEEEEecCC-----HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence 7778888776433 4568899999999998752 224689999999999999999889998853
No 32
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.5e-34 Score=220.86 Aligned_cols=250 Identities=21% Similarity=0.257 Sum_probs=212.3
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec----------------------------------------------------cc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------------------------------------TG 31 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------g~ 31 (269)
=|++|+|+.+|.+|..+++||+|..+ .+
T Consensus 67 HEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~St 146 (375)
T KOG0022|consen 67 HEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTST 146 (375)
T ss_pred ccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEeccccc
Confidence 37899999999999999999999755 37
Q ss_pred eeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024337 32 WEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS 110 (269)
Q Consensus 32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~ 110 (269)
|+||.+++...+.++ +...|++ .++.|.|...|+|.+..+.+++++|++++|+|- |++|++++|-||..|+ ++|++
T Consensus 147 FsEYTVv~~~~v~kI-d~~aPl~-kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgv 223 (375)
T KOG0022|consen 147 FSEYTVVDDISVAKI-DPSAPLE-KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGV 223 (375)
T ss_pred ceeEEEeecceeEec-CCCCChh-heeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEE
Confidence 999999999999999 5554555 588899999999999989999999999999998 9999999999999999 99999
Q ss_pred eCCHHHHHHHHHHcCCceeEecCChh-hHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCC
Q 024337 111 AGSKDKVDLLKNKFGFDEAFNYKEEA-DLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLD 187 (269)
Q Consensus 111 ~~s~~~~~~~~~~~g~~~~~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 187 (269)
+-++++++.++ +||+.+.+|..+.. ...+.++++|++++|+-|||+|+ ..+.+++.....+ |+-+.+|....
T Consensus 224 DiN~~Kf~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~---- 298 (375)
T KOG0022|consen 224 DINPDKFEKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA---- 298 (375)
T ss_pred ecCHHHHHHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC----
Confidence 99999999999 99999999877421 47888999999999999999998 8999999999997 99999987543
Q ss_pred CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
.......+..++ .+.++.|+..+.+.. ++++..+.+...++++. ..+++.+||+++++||+.|.+|+.. |.|+.
T Consensus 299 ~~~i~~~p~~l~-~GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 299 GQEISTRPFQLV-TGRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred Ccccccchhhhc-cccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 222233344444 467777777766533 67788898888888765 4577888999999999999999987 66654
No 33
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.8e-33 Score=236.60 Aligned_cols=245 Identities=20% Similarity=0.194 Sum_probs=203.6
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe--------------------------------------ccceeeEEEecCCceee
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------MTGWEEYSLITAPYLFK 45 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~ 45 (269)
-|++|+|+++|++++.|++||+|+. .|+|+||++++.+.+++
T Consensus 69 ~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~ 148 (357)
T PLN02514 69 HEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVK 148 (357)
T ss_pred ceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEE
Confidence 4788999999999999999999962 27899999999999999
Q ss_pred cCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Q 024337 46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG 125 (269)
Q Consensus 46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g 125 (269)
+ |++++.. +++++++.+.|||+++......+++++++|+|+ |++|++++|+||.+|++|+++++++++...+.+++|
T Consensus 149 i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~G 225 (357)
T PLN02514 149 I-PEGMAPE-QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLG 225 (357)
T ss_pred C-CCCCCHH-HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcC
Confidence 9 9885544 578899999999999966666789999999975 999999999999999999999988887766654799
Q ss_pred CceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337 126 FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (269)
Q Consensus 126 ~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (269)
++.++++.+. +.+.+.+. ++|++|||+|. ..+..++++++++|+++.+|.... .....+..++.++.+
T Consensus 226 a~~~i~~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~ 294 (357)
T PLN02514 226 ADDYLVSSDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------PLQFVTPMLMLGRKV 294 (357)
T ss_pred CcEEecCCCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------CCcccHHHHhhCCcE
Confidence 9877765442 23444333 69999999996 688999999999999999987532 123455667788999
Q ss_pred eeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP 268 (269)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~ 268 (269)
+.++.... ...++++++++.+|.+++.+ ++|+|+|+++|++.+.+++..||+++.++.
T Consensus 295 i~g~~~~~-----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 295 ITGSFIGS-----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred EEEEecCC-----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 99887654 45688899999999998766 479999999999999999988999998864
No 34
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=4e-33 Score=234.46 Aligned_cols=243 Identities=23% Similarity=0.261 Sum_probs=207.5
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
.|++|+|+++|++++.+++||+|++ .|+|+||+.++.+.++++ |+++
T Consensus 70 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~l-P~~~- 147 (351)
T cd08233 70 HEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKL-PDNV- 147 (351)
T ss_pred ccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEEC-cCCC-
Confidence 4788999999999999999999985 378999999999999999 8884
Q ss_pred cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337 53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFN 131 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~ 131 (269)
+++.+++..++.+||+++ ..++++++++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.++++ ++|++.+++
T Consensus 148 -~~~~aa~~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i~ 223 (351)
T cd08233 148 -PLEEAALVEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVLD 223 (351)
T ss_pred -CHHHhhhccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEC
Confidence 444444557888999999 6788999999999986 9999999999999999 8999999999999998 899999999
Q ss_pred cCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337 132 YKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (269)
Q Consensus 132 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (269)
+++. ++.+.+++.+++ ++|++|||+|. ..+..++++++++|+++.+|.... ....++..++.+++++.+..
T Consensus 224 ~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~~ 296 (351)
T cd08233 224 PTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLTGSI 296 (351)
T ss_pred CCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEEEEe
Confidence 8887 888888888776 79999999996 788999999999999999987431 22345667778899998876
Q ss_pred ecccccchHHHHHHHHHHHHCCCee--eeeehccccccH-HHHHHHHhcCCCc-ceEEE
Q 024337 210 VLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESA-PAALIGLFSGQNV-GKQVV 264 (269)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~-~~a~~~~~~~~~~-gkvvv 264 (269)
... .+.++++++++++|.++ +.+.++|+++|+ ++|++.+.+++.. +|+||
T Consensus 297 ~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 297 CYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred ccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 543 46789999999999995 446778999996 7999999998864 89987
No 35
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=5.6e-33 Score=234.48 Aligned_cols=248 Identities=20% Similarity=0.263 Sum_probs=202.3
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec--------------------------------------------------ccee
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM--------------------------------------------------TGWE 33 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--------------------------------------------------g~~~ 33 (269)
-|++|+|+++|++++++++||+|++. |+|+
T Consensus 61 ~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a 140 (365)
T cd08277 61 HEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFS 140 (365)
T ss_pred cceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccce
Confidence 47899999999999999999999763 6899
Q ss_pred eEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeC
Q 024337 34 EYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAG 112 (269)
Q Consensus 34 ~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~ 112 (269)
||+.++.++++++ |++++.. +++++++++.+||+++.+.++++++++|+|+|+ |++|++++|+|+.+|+ +|+++++
T Consensus 141 e~~~v~~~~~~~l-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~ 217 (365)
T cd08277 141 QYTVVDENYVAKI-DPAAPLE-HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDI 217 (365)
T ss_pred eeEEEchhheEEC-CCCCCHH-HhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence 9999999999999 9885544 577888999999999877788999999999986 9999999999999999 7999999
Q ss_pred CHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcC-CEEEEEeccccccCCCC
Q 024337 113 SKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIR-GRIAACGMISQYNLDKP 189 (269)
Q Consensus 113 s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~ 189 (269)
++++.++++ ++|++++++..+. .++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|...+.
T Consensus 218 ~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~----- 291 (365)
T cd08277 218 NEDKFEKAK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA----- 291 (365)
T ss_pred CHHHHHHHH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcc-----
Confidence 999999998 9999888887652 134666777666689999999996 7788999999885 999999875321
Q ss_pred CCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 190 EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
.....+..++. +.++.++....+. ....+..+++++.++.++ +.++++|+|+|+++|++.+.+++ ..|+++
T Consensus 292 ~~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i 364 (365)
T cd08277 292 ELSIRPFQLIL-GRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI 364 (365)
T ss_pred ccccCHhHHhh-CCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence 11223334443 7788887765432 234678899999988655 56778899999999999998877 458776
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=1.7e-32 Score=234.63 Aligned_cols=250 Identities=17% Similarity=0.127 Sum_probs=197.9
Q ss_pred cccceEEEEeccCCC-CCCCCCeEEec-------------------cceeeEEEecCC----ceeecCCCCCCcchhhhh
Q 024337 4 ISGYGVAKVLDSENP-EFSKGDLVWGM-------------------TGWEEYSLITAP----YLFKIQHTDVPLSYYTGI 59 (269)
Q Consensus 4 i~~~G~v~~vg~~v~-~~~~Gd~V~~~-------------------g~~~~~~~v~~~----~~~~~~p~~~~~~~~~a~ 59 (269)
-|++|+|+++|++|+ .|++||+|+.. |+|+||++++.+ .++++ |++ ++++.|+
T Consensus 68 hE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~l-P~~--l~~~~aa 144 (410)
T cd08238 68 HEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLI-YEG--DGYAEAS 144 (410)
T ss_pred cccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEEC-CCC--CCHHHHh
Confidence 467899999999998 59999999762 899999999997 58999 888 4444444
Q ss_pred cCCcchh---HHHHH--------HHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHc-
Q 024337 60 LGMPGMT---AYVGF--------YEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC---YVVGSAGSKDKVDLLKNKF- 124 (269)
Q Consensus 60 l~~~~~~---a~~~l--------~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~---~V~~~~~s~~~~~~~~~~~- 124 (269)
+..++.+ ++.++ .+.++++++++|+|+|++|++|++++|+|+.+|+ +|++++++++++++++ ++
T Consensus 145 l~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~ 223 (410)
T cd08238 145 LVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLF 223 (410)
T ss_pred hcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-Hhc
Confidence 4433322 33332 2346789999999999889999999999999864 8999999999999998 76
Q ss_pred -------CCc-eeEecCC-hhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCcc
Q 024337 125 -------GFD-EAFNYKE-EADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVH 193 (269)
Q Consensus 125 -------g~~-~~~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 193 (269)
|++ .++++.+ . ++.+.+++.+++ ++|++||++|. ..+..++++++++|+++.++..... .....+
T Consensus 224 ~~~~~~~Ga~~~~i~~~~~~-~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~---~~~~~~ 299 (410)
T cd08238 224 PPEAASRGIELLYVNPATID-DLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDK---NFSAPL 299 (410)
T ss_pred cccccccCceEEEECCCccc-cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCC---Cccccc
Confidence 665 4677654 3 677788888877 89999999985 8889999999999988876542110 111235
Q ss_pred chHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337 194 NLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (269)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 267 (269)
++..++.+++++.|+.... .+.++.+++++.+|++++ .++++|+|+++++|++.+. ++..||+|+.++
T Consensus 300 ~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 300 NFYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred cHHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 5667888999999876543 567889999999999987 5788999999999999999 777899999874
No 37
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.8e-32 Score=231.38 Aligned_cols=248 Identities=21% Similarity=0.228 Sum_probs=200.4
Q ss_pred cccceEEEEeccCCCC------CCCCCeEEec-------------------------------------cceeeEEEecC
Q 024337 4 ISGYGVAKVLDSENPE------FSKGDLVWGM-------------------------------------TGWEEYSLITA 40 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~------~~~Gd~V~~~-------------------------------------g~~~~~~~v~~ 40 (269)
.|++|+|+++|++++. +++||+|+.+ |+|+||+.+++
T Consensus 60 ~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 139 (361)
T cd08231 60 HEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPP 139 (361)
T ss_pred cCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecC
Confidence 4788999999999986 9999999764 78999999999
Q ss_pred C-ceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 024337 41 P-YLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVD 118 (269)
Q Consensus 41 ~-~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~ 118 (269)
+ .++++ |++++.. .++++++++.|||+++.....++++++|||+|+ |++|++++++|+.+|+ +|+++++++++.+
T Consensus 140 ~~~~~~l-P~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~ 216 (361)
T cd08231 140 GTAIVRV-PDNVPDE-VAAPANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLE 216 (361)
T ss_pred CCceEEC-CCCCCHH-HHHHhcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 7 79999 8884333 466777999999999977666779999999985 9999999999999999 9999999999999
Q ss_pred HHHHHcCCceeEecCChhhH---HHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCcc
Q 024337 119 LLKNKFGFDEAFNYKEEADL---NAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVH 193 (269)
Q Consensus 119 ~~~~~~g~~~~~~~~~~~~~---~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 193 (269)
+++ ++|++.+++++.. ++ ...+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.... ......
T Consensus 217 ~~~-~~g~~~vi~~~~~-~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~ 290 (361)
T cd08231 217 LAR-EFGADATIDIDEL-PDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAP----AGTVPL 290 (361)
T ss_pred HHH-HcCCCeEEcCccc-ccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCC----CCcccc
Confidence 998 9999888887653 32 2467777766 89999999986 678899999999999999986431 111223
Q ss_pred chHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCC----CeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 194 NLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG----KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.+..++.+++++.++...+ .+.++++++++.++ .+.+.+.++|+++++++|++.+.++.. +|++|.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 291 DPERIVRKNLTIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred CHHHHhhcccEEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 4445688899988876543 34567777777776 344566788999999999999988774 7998863
No 38
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=6e-32 Score=224.93 Aligned_cols=253 Identities=23% Similarity=0.270 Sum_probs=214.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec-----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM-----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK 78 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (269)
.+++|+|+++|++++.+++||+|+++ |+|++|+.++.++++++ |++++.. +++++++.+.+||. +...++++
T Consensus 65 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~a~~~~~~~~ta~~-~~~~~~~~ 141 (324)
T cd08244 65 GEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPV-PDGLDLE-AAVAVVHDGRTALG-LLDLATLT 141 (324)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeC-CCCCCHH-HHhhhcchHHHHHH-HHHhcCCC
Confidence 46789999999999999999999984 79999999999999999 8885544 57789999999964 44678899
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENV 157 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~ 157 (269)
++++++|+|++|++|++++++|+.+|++|+++++++++.+.++ ++|++.++++.+. ++.+.+.+.+++ ++|+++||+
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~ 219 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDGV 219 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEECC
Confidence 9999999999999999999999999999999999999999997 8999888888876 777888777776 899999999
Q ss_pred CchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCeeee
Q 024337 158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKLVYV 236 (269)
Q Consensus 158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~ 236 (269)
|+.....++++++++|+++.+|..... ....+...++.+++++.+...... +....+.+..+++++.++.+.+.
T Consensus 220 g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 294 (324)
T cd08244 220 GGAIGRAALALLAPGGRFLTYGWASGE-----WTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPV 294 (324)
T ss_pred ChHhHHHHHHHhccCcEEEEEecCCCC-----CCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCc
Confidence 997789999999999999999874321 112333456788888888776543 22345678889999999999877
Q ss_pred eehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 237 EDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 237 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
+...+++++++++++.+.+++..||+++++
T Consensus 295 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 295 VGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 777899999999999999998899999864
No 39
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=4.2e-32 Score=231.48 Aligned_cols=249 Identities=19% Similarity=0.259 Sum_probs=207.6
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
.|++|+|+++|++++.+++||+|+++ |+|++|+.++...++++ |++++
T Consensus 87 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~i-P~~l~ 165 (393)
T cd08246 87 SDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPK-PKHLS 165 (393)
T ss_pred cceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEEC-CCCCC
Confidence 46789999999999999999999764 78999999999999999 98854
Q ss_pred cchhhhhcCCcchhHHHHHHHh--hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE
Q 024337 53 LSYYTGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF 130 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~--~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~ 130 (269)
.. +++.+++++.+||+++... ++++++++|+|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++.++
T Consensus 166 ~~-~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G~~~~i 243 (393)
T cd08246 166 WE-EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALGAEGVI 243 (393)
T ss_pred HH-HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCCEEE
Confidence 43 4778999999999998655 67899999999999999999999999999999999999999999998 89998888
Q ss_pred ecCCh---------------------hhHHHHHHHHCCC--CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCC
Q 024337 131 NYKEE---------------------ADLNAALKRYFPE--GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLD 187 (269)
Q Consensus 131 ~~~~~---------------------~~~~~~i~~~~~~--~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 187 (269)
+.++. ..+.+.+.+.+++ ++|++|||+|+..+..++++++++|+++.+|.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~--- 320 (393)
T cd08246 244 NRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY--- 320 (393)
T ss_pred cccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC---
Confidence 76431 0245667777665 699999999988889999999999999999864321
Q ss_pred CCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcC-CCcceEEEE
Q 024337 188 KPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSG-QNVGKQVVA 265 (269)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~ 265 (269)
....+...++.++.++.+.+... .+.+..++++++++.+.+.+.++|++++++++++.+.++ +..||+++-
T Consensus 321 --~~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 321 --NHTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred --CCCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 12234455667777777765543 356788999999999987777889999999999999988 788999874
No 40
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=7.7e-32 Score=224.21 Aligned_cols=253 Identities=22% Similarity=0.296 Sum_probs=215.1
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG 80 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (269)
.+++|+|.++|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++..+.+||+++...+.+.++
T Consensus 62 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~~-~~a~~~~~~~ta~~~~~~~~~~~~~ 139 (323)
T cd05282 62 NEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPV-PDSISDE-QAAMLYINPLTAWLMLTEYLKLPPG 139 (323)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEeCCCCcceeEEecCHHHeEEC-CCCCCHH-HHHHHhccHHHHHHHHHHhccCCCC
Confidence 36889999999999999999999985 79999999999999999 8885443 5778889999999999887888999
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG 159 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 159 (269)
++++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|+++++++.+. ++.+.+.+.+++ ++|+++||+|+
T Consensus 140 ~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~ 217 (323)
T cd05282 140 DWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGG 217 (323)
T ss_pred CEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCCC
Confidence 99999999999999999999999999999999999999998 8999999988876 777888888776 89999999999
Q ss_pred hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHHHCCCee
Q 024337 160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGKLV 234 (269)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~ 234 (269)
......+++++++|+++.+|..... ....+...+..+++++.+.....+ +....+.+..+++++.++.+.
T Consensus 218 ~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 292 (323)
T cd05282 218 ESATRLARSLRPGGTLVNYGLLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLT 292 (323)
T ss_pred HHHHHHHHhhCCCCEEEEEccCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcc
Confidence 7778889999999999999874321 122333444458888888776543 234456788899999999998
Q ss_pred eeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
+.+.+.+++++++++++.+.+++..+|++++
T Consensus 293 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 293 TPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred cCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 7777889999999999999988888898863
No 41
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.1e-32 Score=226.23 Aligned_cols=245 Identities=22% Similarity=0.260 Sum_probs=205.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec----------------------cceeeEEEecCCceeecCCCCCCcchhhhhcC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILG 61 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~ 61 (269)
-|++|+|+++|++++.+++||+|++. |+|++|+.++.+.++++ |++++.. ++++++
T Consensus 83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~a~l~ 160 (350)
T cd08274 83 ADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPV-NSPLSDV-ELATFP 160 (350)
T ss_pred CcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeC-CCCCCHH-HHHhcc
Confidence 46789999999999999999999872 78999999999999999 8885543 578999
Q ss_pred CcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHH
Q 024337 62 MPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAA 141 (269)
Q Consensus 62 ~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 141 (269)
+++.+||+++ ...+++++++++|+|++|++|++++++|+++|++|+++++++ +.+.++ ++|++.+++.... ...+
T Consensus 161 ~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~- 235 (350)
T cd08274 161 CSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTVILRDAP-LLAD- 235 (350)
T ss_pred cHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEEEeCCCc-cHHH-
Confidence 9999999998 678899999999999999999999999999999999998665 888887 8998766665443 3333
Q ss_pred HHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHH
Q 024337 142 LKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKF 220 (269)
Q Consensus 142 i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (269)
...+.+ ++|++|||+|+..+..++++++++|+++.+|.... .....+...++.+++++.++.... .+.
T Consensus 236 -~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 304 (350)
T cd08274 236 -AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAG-----PVVELDLRTLYLKDLTLFGSTLGT-----REV 304 (350)
T ss_pred -HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCC-----ccccCCHHHhhhcceEEEEeecCC-----HHH
Confidence 344444 89999999999889999999999999999986421 112345566678888888877533 567
Q ss_pred HHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 221 LEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
+..+++++.++.+++.+...+++++++++++.+.+++..+|+++.+
T Consensus 305 ~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 305 FRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 8899999999999877778899999999999999888889999864
No 42
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.3e-31 Score=223.61 Aligned_cols=242 Identities=22% Similarity=0.262 Sum_probs=206.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
.|++|+|+++|++++.+++||+|++ .|+|+||+.++.+.++++ |++++
T Consensus 60 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~l-p~~~~ 138 (333)
T cd08296 60 HEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARI-PDDLD 138 (333)
T ss_pred cceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeC-CCCCC
Confidence 4788999999999999999999975 278999999999999999 98854
Q ss_pred cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
.. +++++++++.++|+++.. .+++++++|+|+| +|++|++++++|+.+|++|+++++++++.+.++ ++|+++++++
T Consensus 139 ~~-~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~ 214 (333)
T cd08296 139 AA-EAAPLLCAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDT 214 (333)
T ss_pred HH-HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecC
Confidence 43 477899999999999955 4899999999999 699999999999999999999999999999998 9999989998
Q ss_pred CChhhHHHHHHHHCCCCccEEEeCCC-chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337 133 KEEADLNAALKRYFPEGIDVYFENVG-GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (269)
.+. ++.+.+.+. .++|+++|+.| ...+..++++++++|+++.+|.... ........++.+++++.+....
T Consensus 215 ~~~-~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~ 285 (333)
T cd08296 215 SKE-DVAEALQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPSG 285 (333)
T ss_pred CCc-cHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCcC
Confidence 876 676666655 36999999997 4788999999999999999987531 2234455677899999987643
Q ss_pred ccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
. .+.+..+++++.++.+++.+ ..++++++.+|++.+.+++..||+|++
T Consensus 286 ~-----~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 286 T-----ALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred C-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 3 45678888889999888765 479999999999999999999999873
No 43
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-31 Score=223.61 Aligned_cols=257 Identities=23% Similarity=0.335 Sum_probs=213.6
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG 80 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (269)
.+++|+|.++|++++.+++||+|+++ |+|++|+.++.++++++ |++++.. +++.++.++.+||+++...+.++++
T Consensus 64 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~ 141 (334)
T PTZ00354 64 LEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHI-PQGYTFE-EAAAIPEAFLTAWQLLKKHGDVKKG 141 (334)
T ss_pred eeeEEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEEecHHHcEeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 46789999999999999999999997 79999999999999999 9885443 4778899999999999777889999
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhh-HHHHHHHHCCC-CccEEEeCCC
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD-LNAALKRYFPE-GIDVYFENVG 158 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~-~~~~i~~~~~~-~~d~vid~~g 158 (269)
++|+|+|++|++|++++++|+.+|++++.+.+++++.++++ ++|++.+++.... + +.+.+.+.+++ ++|+++||.|
T Consensus 142 ~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~ 219 (334)
T PTZ00354 142 QSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCVG 219 (334)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECCc
Confidence 99999999999999999999999999888999999999998 8999888887764 4 77778887766 8999999999
Q ss_pred chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHHHCCCe
Q 024337 159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGKL 233 (269)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~ 233 (269)
+..+..++++++++|+++.++...+. .....+...++.++.++.++..... +....+.++.+++++.++.+
T Consensus 220 ~~~~~~~~~~l~~~g~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 295 (334)
T PTZ00354 220 GSYLSETAEVLAVDGKWIVYGFMGGA----KVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEI 295 (334)
T ss_pred hHHHHHHHHHhccCCeEEEEecCCCC----cccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCc
Confidence 88899999999999999998864321 1111444555666667777654331 11223556788899999998
Q ss_pred eeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337 234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP 268 (269)
Q Consensus 234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~ 268 (269)
.+.+...+++++++++++.+.+++..+|+++++.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~ 330 (334)
T PTZ00354 296 KPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE 330 (334)
T ss_pred cCccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 87777789999999999999988888999998765
No 44
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=9.6e-32 Score=225.31 Aligned_cols=255 Identities=25% Similarity=0.279 Sum_probs=211.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH 79 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~ 79 (269)
.|++|+|+++|++++.+++||+|++. |+|++|+.++.+.++++ |++++.. +++++++.+.++|+++.....+++
T Consensus 69 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~ 146 (341)
T cd08290 69 NEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKV-PNDVDPE-QAATLSVNPCTAYRLLEDFVKLQP 146 (341)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEeC-CCCCCHH-HHHHhhccHHHHHHHHHhhcccCC
Confidence 47899999999999999999999986 89999999999999999 8885443 578889999999999977788999
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHcCCceeEecCCh--hhHHHHHHHHCCCCccEE
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKVDLLKNKFGFDEAFNYKEE--ADLNAALKRYFPEGIDVY 153 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~----~~~~~~~~~~g~~~~~~~~~~--~~~~~~i~~~~~~~~d~v 153 (269)
+++|+|+|++|++|++++|+|++.|++|+++++++ ++.+.++ ++|++++++++.. .++.+.+....++++|++
T Consensus 147 g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~v 225 (341)
T cd08290 147 GDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELRSLLATELLKSAPGGRPKLA 225 (341)
T ss_pred CCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccccccHHHHHHHHcCCCceEE
Confidence 99999999999999999999999999999999776 6688887 8999998887651 035566666654479999
Q ss_pred EeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHH
Q 024337 154 FENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHI 228 (269)
Q Consensus 154 id~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 228 (269)
|||+|+..+...+++++++|+++.++.... .........++.+++++.+.....+ +....+.+..+++++
T Consensus 226 ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (341)
T cd08290 226 LNCVGGKSATELARLLSPGGTMVTYGGMSG-----QPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELI 300 (341)
T ss_pred EECcCcHhHHHHHHHhCCCCEEEEEeccCC-----CCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHH
Confidence 999999778889999999999999986432 1122334456788999988876442 223345688899999
Q ss_pred HCCCeeeeeehcc---ccccHHHHHHHHhcCCCcceEEEEe
Q 024337 229 KEGKLVYVEDMAE---GLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 229 ~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.++.+.+.....+ ++++++++++.+.+++..+|+|+.+
T Consensus 301 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 301 REGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 9999987666667 9999999999999988889999864
No 45
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.8e-31 Score=223.23 Aligned_cols=248 Identities=17% Similarity=0.246 Sum_probs=201.9
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA 77 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~ 77 (269)
.|++|+|+++|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++++++++.+||+++...+++
T Consensus 64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~ 141 (336)
T TIGR02817 64 WDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHK-PKSLSFA-EAAALPLTSITAWELLFDRLGI 141 (336)
T ss_pred eeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccC-CCCCCHH-HHhhhhHHHHHHHHHHHHhcCC
Confidence 47889999999999999999999985 78999999999999999 9885543 5788999999999999887888
Q ss_pred CC-----CCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337 78 KH-----GECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID 151 (269)
Q Consensus 78 ~~-----~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d 151 (269)
++ +++|+|+|++|++|++++|+|+.+ |++|+++++++++.+.++ ++|+++++++.. ++.+.+.+..++++|
T Consensus 142 ~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~vd 218 (336)
T TIGR02817 142 NDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAVS 218 (336)
T ss_pred CCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--CHHHHHHHhcCCCCC
Confidence 87 999999999999999999999998 999999999999999998 899998988654 666777765444899
Q ss_pred EEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc---c--ccch--HHHHHH
Q 024337 152 VYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD---H--YHLY--PKFLEM 223 (269)
Q Consensus 152 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~--~~~~~~ 223 (269)
+++|++++ ..+...+++++++|+++.++.. ...+...+..+++++.+..... + +... .+.+++
T Consensus 219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (336)
T TIGR02817 219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDP---------AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNR 289 (336)
T ss_pred EEEEcCCcHHHHHHHHHHhccCCEEEEEccc---------ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHH
Confidence 99999864 7889999999999999987431 1122333445556665543321 1 1111 256888
Q ss_pred HHHHHHCCCeeeeeehccc---cccHHHHHHHHhcCCCcceEEEE
Q 024337 224 IIPHIKEGKLVYVEDMAEG---LESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 224 ~~~~~~~g~~~~~~~~~~~---~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
+++++.++.+++.+.+.++ ++++++|++.+.+++..||+++.
T Consensus 290 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 290 VARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 9999999999876665554 68999999999999888998874
No 46
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=7.4e-32 Score=227.00 Aligned_cols=240 Identities=20% Similarity=0.198 Sum_probs=188.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------------------------------cceeeEEEecCCceeecCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------TGWEEYSLITAPYLFKIQHTD 50 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~~~~~~~~p~~ 50 (269)
-|++|+|+++|++ +.|++||+|++. |+|+||++++.+.++++ |++
T Consensus 63 ~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~-P~~ 140 (355)
T cd08230 63 HEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKV-PPS 140 (355)
T ss_pred cccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEEC-CCC
Confidence 5789999999999 999999999742 67999999999999999 888
Q ss_pred CCcchhhhhcCCcchhHHHHHHHh------hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHH
Q 024337 51 VPLSYYTGILGMPGMTAYVGFYEV------CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKVDLLK 121 (269)
Q Consensus 51 ~~~~~~~a~l~~~~~~a~~~l~~~------~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~---s~~~~~~~~ 121 (269)
++ +++++..++.+++.++... .+++++++|+|+|+ |++|++++|+||++|++|+++++ ++++.++++
T Consensus 141 --~~-~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~ 216 (355)
T cd08230 141 --LA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE 216 (355)
T ss_pred --CC-cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH
Confidence 44 5667777777766665332 23578999999997 99999999999999999999997 678999998
Q ss_pred HHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccc----hH
Q 024337 122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN----LM 196 (269)
Q Consensus 122 ~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~ 196 (269)
++|++. +++.+. ++.+ .+ ..+++|++|||+|. ..+..+++.++++|+++.+|...+. ...... ..
T Consensus 217 -~~Ga~~-v~~~~~-~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~----~~~~~~~~~~~~ 286 (355)
T cd08230 217 -ELGATY-VNSSKT-PVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG----REFEVDGGELNR 286 (355)
T ss_pred -HcCCEE-ecCCcc-chhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCC----CccccChhhhhh
Confidence 999986 566554 4433 21 12479999999997 6789999999999999999875431 111122 34
Q ss_pred HHhhcceeeeeeeecccccchHHHHHHHHHHHHCCC------eeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 197 YLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK------LVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.++.+++++.|+...+ .+.++.+++++.++. +++.++++|+++|+++|++.+.++. .|+++.+
T Consensus 287 ~~~~k~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 287 DLVLGNKALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred hHhhcCcEEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 6778999999876543 345677888887665 5666788999999999999887654 4999864
No 47
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.5e-31 Score=226.77 Aligned_cols=252 Identities=18% Similarity=0.183 Sum_probs=192.6
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe----------------------------------------ccceeeEEEecCC--
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG----------------------------------------MTGWEEYSLITAP-- 41 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~-- 41 (269)
-|++|+|+++|++|+++++||||+. .|+|+||+++|..
T Consensus 67 hE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~ 146 (393)
T TIGR02819 67 HEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADF 146 (393)
T ss_pred ceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhC
Confidence 4689999999999999999999944 1789999999974
Q ss_pred ceeecCCCCCCcc---hhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEE-EEEeCCHHHH
Q 024337 42 YLFKIQHTDVPLS---YYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYV-VGSAGSKDKV 117 (269)
Q Consensus 42 ~~~~~~p~~~~~~---~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V-~~~~~s~~~~ 117 (269)
+++++ |++++.. ..++++.+++.++|+++. .++++++++|+|.|+ |++|++++|+|+.+|+++ +++++++++.
T Consensus 147 ~l~~v-P~~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 147 NLLKF-PDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred ceEEC-CCcccccccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 79999 8764321 135788889999999984 578999999999765 999999999999999964 4456678899
Q ss_pred HHHHHHcCCceeEecC-ChhhHHHHHHHHCCC-CccEEEeCCCch---------------hHhhhHhhhhcCCEEEEEec
Q 024337 118 DLLKNKFGFDEAFNYK-EEADLNAALKRYFPE-GIDVYFENVGGK---------------TLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 118 ~~~~~~~g~~~~~~~~-~~~~~~~~i~~~~~~-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~ 180 (269)
++++ ++|++. +++. +. ++.+.+.+.+++ ++|++|||+|.. .+..++++++++|+++.+|.
T Consensus 224 ~~a~-~~Ga~~-v~~~~~~-~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~ 300 (393)
T TIGR02819 224 AQAR-SFGCET-VDLSKDA-TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGL 300 (393)
T ss_pred HHHH-HcCCeE-EecCCcc-cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeee
Confidence 9999 999974 5543 33 567778877766 899999999973 79999999999999999998
Q ss_pred ccc-ccCCC------CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eee-hccccccHHHHH
Q 024337 181 ISQ-YNLDK------PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VED-MAEGLESAPAAL 250 (269)
Q Consensus 181 ~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~-~~~~~~~~~~a~ 250 (269)
... ..... ............+++++.+... ...+++..+++++.+|++++ .++ ++|+|+|+++||
T Consensus 301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~-----~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~ 375 (393)
T TIGR02819 301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT-----PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGY 375 (393)
T ss_pred cCCcccccccccccccccccchHHhhccCceEEeccC-----ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHH
Confidence 531 10000 0111223344455566655321 11345578999999999875 345 689999999999
Q ss_pred HHHhcCCCcceEEEEec
Q 024337 251 IGLFSGQNVGKQVVAVA 267 (269)
Q Consensus 251 ~~~~~~~~~gkvvv~~~ 267 (269)
+.+.++.. +|+++.++
T Consensus 376 ~~~~~~~~-~Kvvi~~~ 391 (393)
T TIGR02819 376 AEFDAGAA-KKFVIDPH 391 (393)
T ss_pred HHHhhCCc-eEEEEeCC
Confidence 99988754 89999875
No 48
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.7e-31 Score=222.83 Aligned_cols=249 Identities=24% Similarity=0.250 Sum_probs=202.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec-----------------------------------cceeeEEEecCCceeecCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM-----------------------------------TGWEEYSLITAPYLFKIQH 48 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-----------------------------------g~~~~~~~v~~~~~~~~~p 48 (269)
=|++|+|+++| .++.+++||||+.. |+|+||+.+|.++.+++.|
T Consensus 61 HE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~p 139 (350)
T COG1063 61 HEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLP 139 (350)
T ss_pred ccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCC
Confidence 47889999999 77889999999533 6899999999876665537
Q ss_pred CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD 127 (269)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~ 127 (269)
+++ +.++|++..++.+++++........++.+|+|+|+ |++|++++++++.+|+ +|++++++++|++++++..+++
T Consensus 140 d~~--~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~ 216 (350)
T COG1063 140 DGI--DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGAD 216 (350)
T ss_pred CCC--ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCe
Confidence 763 55789999999999888545555666669999998 9999999999999998 8899999999999999336777
Q ss_pred eeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee
Q 024337 128 EAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM 205 (269)
Q Consensus 128 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (269)
.+++.... +....+.+.+++ ++|++|||+|. ..+..+++.++++|+++.+|..... ........++.+++++
T Consensus 217 ~~~~~~~~-~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~-----~~~~~~~~~~~kel~l 290 (350)
T COG1063 217 VVVNPSED-DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGE-----DIPLPAGLVVSKELTL 290 (350)
T ss_pred EeecCccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCc-----cCccCHHHHHhcccEE
Confidence 66666554 566777788888 99999999997 7789999999999999999986531 1145567889999999
Q ss_pred eeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCC-cceEEEEe
Q 024337 206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQN-VGKQVVAV 266 (269)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~ 266 (269)
.|+... .....++.+++++.+|++++. +++.+++++++++++.+.+... ..|+++.+
T Consensus 291 ~gs~~~----~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 291 RGSLRP----SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred EeccCC----CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 998431 124568999999999999864 4567789999999999987554 45887753
No 49
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=2.8e-31 Score=226.52 Aligned_cols=252 Identities=19% Similarity=0.242 Sum_probs=208.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
.|++|+|+++|++++.+++||+|++. |+|+||+.++.+.++++ |++++
T Consensus 83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~v-P~~l~ 161 (398)
T TIGR01751 83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPK-PKHLT 161 (398)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEEC-CCCCC
Confidence 35789999999999999999999763 78999999999999999 88854
Q ss_pred cchhhhhcCCcchhHHHHHHH--hhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE
Q 024337 53 LSYYTGILGMPGMTAYVGFYE--VCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF 130 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~--~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~ 130 (269)
.. +++.+..++.+||+++.. .+++.++++++|+|++|++|++++++|+++|++++++++++++.+.++ ++|++.++
T Consensus 162 ~~-~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g~~~~v 239 (398)
T TIGR01751 162 WE-EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELGAEAVI 239 (398)
T ss_pred HH-HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCCEEe
Confidence 43 477888999999999854 467899999999999999999999999999999999988999999998 79998888
Q ss_pred ecCCh---------------------hhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCC
Q 024337 131 NYKEE---------------------ADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDK 188 (269)
Q Consensus 131 ~~~~~---------------------~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 188 (269)
|.++. ..+.+.+.+.+++ ++|++|||+|...+..++++++++|+++.+|.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~---- 315 (398)
T TIGR01751 240 DRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGY---- 315 (398)
T ss_pred cCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCC----
Confidence 86431 0244556667765 899999999988889999999999999999875431
Q ss_pred CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEecC
Q 024337 189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVAP 268 (269)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~~ 268 (269)
........++.++.++.++.... .+.+..+++++.++.+.+.+..++++++++++++.+.+++..||+|+.+..
T Consensus 316 -~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 389 (398)
T TIGR01751 316 -NHDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA 389 (398)
T ss_pred -CCCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence 11233445556677776665433 334678899999999988777889999999999999999989999998754
No 50
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=5.7e-32 Score=220.33 Aligned_cols=227 Identities=18% Similarity=0.208 Sum_probs=183.7
Q ss_pred CcccceEEEEeccCCC------CCCCCCeEEe-------------------------------------ccceeeEEEec
Q 024337 3 PISGYGVAKVLDSENP------EFSKGDLVWG-------------------------------------MTGWEEYSLIT 39 (269)
Q Consensus 3 ~i~~~G~v~~vg~~v~------~~~~Gd~V~~-------------------------------------~g~~~~~~~v~ 39 (269)
-=|++|+|+++|++|+ ++++||||+. .|+|+||++++
T Consensus 3 GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v~ 82 (280)
T TIGR03366 3 GHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHLP 82 (280)
T ss_pred CcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEEec
Confidence 3488999999999999 8999999953 16799999999
Q ss_pred CC-ceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHH
Q 024337 40 AP-YLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKV 117 (269)
Q Consensus 40 ~~-~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~ 117 (269)
++ .++++ |++++.. .++++++.+.|+|+++.. ....++++|+|+|+ |++|++++|+||.+|++ |+++++++++.
T Consensus 83 ~~~~~~~l-P~~~~~~-~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 83 AGTAIVPV-PDDLPDA-VAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred CCCcEEEC-CCCCCHH-HhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 98 79999 9885543 477888899999999844 55679999999987 99999999999999995 89998899999
Q ss_pred HHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccch
Q 024337 118 DLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL 195 (269)
Q Consensus 118 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 195 (269)
++++ ++|++.+++..+ ..+.+.+.+++ ++|++|||+|. ..+..++++++++|+++.+|.... ......++
T Consensus 159 ~~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----~~~~~i~~ 230 (280)
T TIGR03366 159 ELAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFP----GGPVALDP 230 (280)
T ss_pred HHHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCC----CCceeeCH
Confidence 9999 999988887643 34456666655 89999999996 678999999999999999986421 11223556
Q ss_pred HHHhhcceeeeeeeecccccchHHHHHHHHHHHHCC--Cee--eeeehccccccH
Q 024337 196 MYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEG--KLV--YVEDMAEGLESA 246 (269)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~--~~~~~~~~~~~~ 246 (269)
..++.+++++.++.... .+.++++++++.++ .+. +.++++|+++|+
T Consensus 231 ~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 231 EQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred HHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 78889999999876543 56788999999874 333 456778888763
No 51
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=2.1e-31 Score=222.13 Aligned_cols=257 Identities=50% Similarity=0.784 Sum_probs=210.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecC-CceeecCCCCCCcch-hhhh-cCCcchhHHHHHHHhhcCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITA-PYLFKIQHTDVPLSY-YTGI-LGMPGMTAYVGFYEVCSAKHG 80 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~~p~~~~~~~-~~a~-l~~~~~~a~~~l~~~~~~~~~ 80 (269)
.|++|+|+++|++ .+++||+|+++++|++|+.++. +.++++ |++++.++ .+++ +++++.+||+++...+++.++
T Consensus 70 ~e~~G~V~~~G~~--~~~~Gd~V~~~~~~~~~~~v~~~~~~~~l-P~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~ 146 (329)
T cd05288 70 GGGVGEVVESRSP--DFKVGDLVSGFLGWQEYAVVDGASGLRKL-DPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPG 146 (329)
T ss_pred CceEEEEEecCCC--CCCCCCEEecccceEEEEEecchhhcEEC-CcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCC
Confidence 4788999999964 7999999999999999999999 999999 88853122 3444 999999999999777889999
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK 160 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 160 (269)
++|+|+|++|++|+++++++++.|++|+++++++++.+.+++.+|++.++++++. ++.+.+.+.+++++|+++||+|+.
T Consensus 147 ~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~~ 225 (329)
T cd05288 147 ETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGE 225 (329)
T ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchHH
Confidence 9999999999999999999999999999999999999999833999889988876 777777777655899999999998
Q ss_pred hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeehc
Q 024337 161 TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMA 240 (269)
Q Consensus 161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 240 (269)
.+..++++++++|+++.+|..............+....+.+++++.+...........+.+..+++++.++.+++.....
T Consensus 226 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~ 305 (329)
T cd05288 226 ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVV 305 (329)
T ss_pred HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccccccc
Confidence 89999999999999999986442110000001234556778888888765443323356788899999999998766667
Q ss_pred cccccHHHHHHHHhcCCCcceEEE
Q 024337 241 EGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 241 ~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
+++++++++++.+.+++..+|+++
T Consensus 306 ~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 306 EGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred ccHHHHHHHHHHHhcCCCccceeC
Confidence 899999999999998887888874
No 52
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=3.1e-31 Score=222.14 Aligned_cols=244 Identities=22% Similarity=0.266 Sum_probs=205.1
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
.+++|+|.++|++++.+++||+|+++ |+|++|+.++.++++++ |++++.
T Consensus 63 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-P~~ls~ 141 (340)
T cd05284 63 HENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKL-PRGLDP 141 (340)
T ss_pred cceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEEC-CCCCCH
Confidence 46789999999999999999999864 68999999999999999 988544
Q ss_pred chhhhhcCCcchhHHHHHHHh-hcCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337 54 SYYTGILGMPGMTAYVGFYEV-CSAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFN 131 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~~~ 131 (269)
. ++++++..+.|||+++... ..+.++++|+|+|+ +++|++++++|+..| .+|+++++++++.+.++ ++|++++++
T Consensus 142 ~-~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~ 218 (340)
T cd05284 142 V-EAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLN 218 (340)
T ss_pred H-HhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEc
Confidence 3 5789999999999999766 46889999999996 679999999999999 79999999999999998 999988888
Q ss_pred cCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337 132 YKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (269)
Q Consensus 132 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (269)
+++ .+.+.+++.+++ ++|+++||+|+ ..+..++++++++|+++.+|.... ........+.+++++.+..
T Consensus 219 ~~~--~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~~ 289 (340)
T cd05284 219 ASD--DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGSL 289 (340)
T ss_pred CCc--cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEEe
Confidence 876 466777777766 89999999996 788999999999999999986431 1222334457888888776
Q ss_pred ecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 210 VLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
... .+.+..+++++.++.+++.+ ..+++++++++++.+.+++..||+++.+
T Consensus 290 ~~~-----~~~~~~~~~~l~~g~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 290 WGT-----RAELVEVVALAESGKVKVEI-TKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred ccc-----HHHHHHHHHHHHhCCCCcce-EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 432 45688899999999988643 5689999999999999998889999864
No 53
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=7.4e-31 Score=219.95 Aligned_cols=247 Identities=22% Similarity=0.274 Sum_probs=209.7
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
.+++|+|+++|++++.+++||+|+. .|+|++|+.++.+.++++ |++++
T Consensus 62 ~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~l-p~~~~ 140 (341)
T cd08297 62 HEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPI-PDGLS 140 (341)
T ss_pred cccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEEC-CCCCC
Confidence 4788999999999999999999985 378999999999999999 88854
Q ss_pred cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
.. ++++++..+.+||+++.. .+++++++++|+|+++++|++++++|+++|++|+++++++++.+.++ ++|++.++++
T Consensus 141 ~~-~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~ 217 (341)
T cd08297 141 FE-QAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDF 217 (341)
T ss_pred HH-HHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcC
Confidence 44 477899999999999965 58999999999999888999999999999999999999999999997 8999989998
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337 133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (269)
++. ++.+.+.+.+++ ++|+++||.++ .....++++++++|+++.+|.... .....+...++.+++++.+...
T Consensus 218 ~~~-~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 291 (341)
T cd08297 218 KKS-DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG-----GFIPLDPFDLVLRGITIVGSLV 291 (341)
T ss_pred CCc-cHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC-----CCCCCCHHHHHhcccEEEEecc
Confidence 876 778888887765 89999997774 788899999999999999986432 1123344566678888877543
Q ss_pred cccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 211 LDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.. .+.++.+++++.++.+.+.+ ..+++++++++++.+.++...||+++++
T Consensus 292 ~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 292 GT-----RQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred CC-----HHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 32 57788899999999987654 5689999999999999998899999875
No 54
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=6.3e-31 Score=222.36 Aligned_cols=249 Identities=24% Similarity=0.301 Sum_probs=209.3
Q ss_pred cccceEEEEeccCCCC---CCCCCeEEe----------------------------------------------------
Q 024337 4 ISGYGVAKVLDSENPE---FSKGDLVWG---------------------------------------------------- 28 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~---~~~Gd~V~~---------------------------------------------------- 28 (269)
.|++|+|+.+|++++. +++||+|++
T Consensus 59 ~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (367)
T cd08263 59 HEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYS 138 (367)
T ss_pred cccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccccc
Confidence 4789999999999988 999999987
Q ss_pred ccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-E
Q 024337 29 MTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-V 107 (269)
Q Consensus 29 ~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V 107 (269)
.|+|++|+.++.+.++++ |++++.. ++++++.++.+||+++...+.+.++++|+|+| +|++|++++++|+.+|++ |
T Consensus 139 ~g~~~~~~~~~~~~~~~~-P~~is~~-~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~v 215 (367)
T cd08263 139 MGGLAEYAVVPATALAPL-PESLDYT-ESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPI 215 (367)
T ss_pred CCcceeEEEechhhEEEC-CCCCCHH-HHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeE
Confidence 278999999999999999 9986544 58899999999999998878889999999996 599999999999999997 9
Q ss_pred EEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCch-hHhhhHhhhhcCCEEEEEecccccc
Q 024337 108 VGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYN 185 (269)
Q Consensus 108 ~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~ 185 (269)
++++.++++.+.++ ++|++.+++++.. ++.+.+.+..++ ++|+++||+|+. .+..++++++++|+++.++....
T Consensus 216 i~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~-- 291 (367)
T cd08263 216 IAVDVRDEKLAKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPG-- 291 (367)
T ss_pred EEEeCCHHHHHHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCC--
Confidence 98988999999998 8999999998876 777788877665 899999999986 88999999999999999976431
Q ss_pred CCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEE
Q 024337 186 LDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQV 263 (269)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvv 263 (269)
......+...++.+++++.++.... ..+.++.+++++.++.+.+. +...++++++.++++.+.+++..||+|
T Consensus 292 --~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~ 365 (367)
T cd08263 292 --GATAEIPITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAI 365 (367)
T ss_pred --CCccccCHHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceee
Confidence 1122234455557888877743221 24678889999999998864 557789999999999999998889998
Q ss_pred EE
Q 024337 264 VA 265 (269)
Q Consensus 264 v~ 265 (269)
|+
T Consensus 366 ~~ 367 (367)
T cd08263 366 VE 367 (367)
T ss_pred eC
Confidence 74
No 55
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.4e-31 Score=222.42 Aligned_cols=233 Identities=15% Similarity=0.162 Sum_probs=181.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------------------------cceeeEEEecCCceeecCCCCCCcchh
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------TGWEEYSLITAPYLFKIQHTDVPLSYY 56 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~ 56 (269)
-|++|+|+++|.+ .|++||+|+.. |+|+||+++|+++++++ |++ ++++
T Consensus 64 hE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v-P~~--l~~~ 138 (341)
T cd08237 64 HEGIGVVVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKL-PDN--VDPE 138 (341)
T ss_pred ceeEEEEEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEEC-CCC--CChH
Confidence 4678888887764 69999999752 77999999999999999 888 4445
Q ss_pred hhhcCCcchhHHHHHHHh--hcCCCCCEEEEecCcchHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 57 TGILGMPGMTAYVGFYEV--CSAKHGECVFISAASGAVGQLVGQFAKL-LG-CYVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 57 ~a~l~~~~~~a~~~l~~~--~~~~~~~~vlI~ga~g~vG~~~i~~a~~-~G-~~V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
.|+++.++.++|+++... +.++++++|+|.|+ |++|++++|++++ +| .+|+++++++++.++++ .++..+.++
T Consensus 139 ~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~~- 215 (341)
T cd08237 139 VAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLID- 215 (341)
T ss_pred HhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeehh-
Confidence 667888999999998543 34688999999997 9999999999986 55 58999999999999998 666543221
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCc----hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeee
Q 024337 133 KEEADLNAALKRYFPE-GIDVYFENVGG----KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG 207 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (269)
++. .+ ++|++|||+|+ ..+..++++++++|+++.+|.... ....++..++.+++++.+
T Consensus 216 ----~~~-------~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g 278 (341)
T cd08237 216 ----DIP-------EDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKGLTLVG 278 (341)
T ss_pred ----hhh-------hccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCceEEEE
Confidence 111 12 69999999994 468999999999999999986421 123445667889999998
Q ss_pred eeecccccchHHHHHHHHHHHHCC-----Ceeeeeehccccc---cHHHHHHHHhcCCCcceEEEEec
Q 024337 208 FIVLDHYHLYPKFLEMIIPHIKEG-----KLVYVEDMAEGLE---SAPAALIGLFSGQNVGKQVVAVA 267 (269)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~---~~~~a~~~~~~~~~~gkvvv~~~ 267 (269)
+.... .+.++++++++.++ .+++.++++|+++ ++.++++.+.++ ..||+|++++
T Consensus 279 ~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 279 SSRST-----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred ecccC-----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 76532 45688899999988 5677788889875 556666655554 5789999875
No 56
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.4e-31 Score=220.81 Aligned_cols=229 Identities=15% Similarity=0.169 Sum_probs=178.7
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe------------ccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHH
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG------------MTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGF 71 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l 71 (269)
-|++|+|+++|+++ .|++||+|+. .|+|+||++++++.++++ |++++ .+++. ...+.+||+++
T Consensus 64 hE~~G~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~i-p~~~~--~~~a~-~~~~~~a~~~~ 138 (308)
T TIGR01202 64 YESVGRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRL-DPALG--PQGAL-LALAATARHAV 138 (308)
T ss_pred ceeEEEEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeC-CCCCC--HHHHh-hhHHHHHHHHH
Confidence 46889999999998 5999999984 489999999999999999 88744 34443 45678999999
Q ss_pred HHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCc
Q 024337 72 YEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGI 150 (269)
Q Consensus 72 ~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 150 (269)
.+ . ..++++++|+|+ |++|++++|+|+.+|++ |++++.++++++.+. .+ .++|+.+ . .+.++
T Consensus 139 ~~-~-~~~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~~---~~i~~~~--~--------~~~g~ 201 (308)
T TIGR01202 139 AG-A-EVKVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-GY---EVLDPEK--D--------PRRDY 201 (308)
T ss_pred Hh-c-ccCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-hc---cccChhh--c--------cCCCC
Confidence 54 3 346889999986 99999999999999996 556666666666554 32 3454321 1 12379
Q ss_pred cEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHH
Q 024337 151 DVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIK 229 (269)
Q Consensus 151 d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (269)
|++|||+|+ ..+..++++++++|+++.+|.... ....++..++.+++++.++..+. .+.++++++++.
T Consensus 202 Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~ 270 (308)
T TIGR01202 202 RAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE------PVNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIE 270 (308)
T ss_pred CEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC------CcccccchhhhcceEEEEecccc-----hhHHHHHHHHHH
Confidence 999999998 578999999999999999987432 12234456677888888765433 567999999999
Q ss_pred CCCeee--eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 230 EGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 230 ~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
+|.+++ .+++.|+|+|+++|++.+.++...+|++++
T Consensus 271 ~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 271 SGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 999876 477889999999999998877667899874
No 57
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.4e-30 Score=217.15 Aligned_cols=256 Identities=35% Similarity=0.567 Sum_probs=211.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec--cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM--TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGE 81 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~ 81 (269)
.+++|+|..+|++++.+++||+|+++ |+|++|+.++.+.++++ |++ .. ++++++.++.+||+++....++++++
T Consensus 66 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~ 141 (329)
T cd08250 66 FEGVGEVVAVGEGVTDFKVGDAVATMSFGAFAEYQVVPARHAVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGE 141 (329)
T ss_pred ceeEEEEEEECCCCCCCCCCCEEEEecCcceeEEEEechHHeEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCC
Confidence 46789999999999999999999986 89999999999999999 876 33 57889999999999997778899999
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchh
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKT 161 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 161 (269)
+++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++.+++.++. ++.+.+.+..++++|+++||+|+..
T Consensus 142 ~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~ 219 (329)
T cd08250 142 TVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEM 219 (329)
T ss_pred EEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHH
Confidence 9999999999999999999999999999999999999998 8999888887775 6767776655458999999999988
Q ss_pred HhhhHhhhhcCCEEEEEeccccccCCC-C---CCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeeee
Q 024337 162 LDAVLPNMKIRGRIAACGMISQYNLDK-P---EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVE 237 (269)
Q Consensus 162 ~~~~~~~l~~~G~~v~~g~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 237 (269)
+..++++++++|+++.+|......... . .........+.+++++.++....+.....+.+.++++++.++.+.+..
T Consensus 220 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 299 (329)
T cd08250 220 FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEV 299 (329)
T ss_pred HHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeE
Confidence 999999999999999998754210000 0 001112345778888888876543323466788899999999988743
Q ss_pred --ehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 238 --DMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 238 --~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
...++++++++|++.+.+++..+|++++
T Consensus 300 ~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 300 DPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred CCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 3458999999999999988888898874
No 58
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.7e-30 Score=218.14 Aligned_cols=249 Identities=23% Similarity=0.278 Sum_probs=208.3
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCC--ceeecCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAP--YLFKIQHTDV 51 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~--~~~~~~p~~~ 51 (269)
.+++|+|+.+|++++.+++||+|++ .|+|++|+.++.+ .++++ |+++
T Consensus 60 ~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~i-P~~~ 138 (345)
T cd08260 60 HEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRL-PDDV 138 (345)
T ss_pred cceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEEC-CCCC
Confidence 5788999999999999999999986 3789999999985 89999 9885
Q ss_pred CcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337 52 PLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN 131 (269)
Q Consensus 52 ~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~ 131 (269)
+.. +++.++.++.+||+++...+++.++++|+|+| +|++|++++++|+.+|++|+++++++++.+.++ ++|++++++
T Consensus 139 ~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~ 215 (345)
T cd08260 139 DFV-TAAGLGCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVN 215 (345)
T ss_pred CHH-HhhhhccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEc
Confidence 543 57888999999999997778899999999999 599999999999999999999999999999998 899999998
Q ss_pred cCC-hhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337 132 YKE-EADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (269)
Q Consensus 132 ~~~-~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (269)
+++ . ++.+.+.+..++++|++|||+|+ ..+..++++++++|+++.+|...... ......+..++.+++++.+..
T Consensus 216 ~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 291 (345)
T cd08260 216 ASEVE-DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEE---AGVALPMDRVVARELEIVGSH 291 (345)
T ss_pred cccch-hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCC---CccccCHHHHhhcccEEEeCC
Confidence 887 5 77777777665589999999995 78889999999999999998743210 012234455667888887765
Q ss_pred ecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 210 VLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
... .+.++.++++++++.+.+. +...+++++++++++.+.+++..+|+|++
T Consensus 292 ~~~-----~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 292 GMP-----AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred cCC-----HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 432 5678889999999988753 55778999999999999999888998864
No 59
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.6e-30 Score=218.70 Aligned_cols=245 Identities=20% Similarity=0.250 Sum_probs=205.2
Q ss_pred ccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCcc
Q 024337 5 SGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPLS 54 (269)
Q Consensus 5 ~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~~ 54 (269)
+++|+|.++|++++.+++||+|+++ |+|++|+.++.+.++++ |++++..
T Consensus 73 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~s~~ 151 (350)
T cd08240 73 EIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVD-PGGLDPA 151 (350)
T ss_pred ceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeC-CCCCCHH
Confidence 6789999999999999999999864 68999999999999999 8885544
Q ss_pred hhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337 55 YYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (269)
Q Consensus 55 ~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~ 133 (269)
+++++++.+.+||+++.....+.++++|+|+| +|++|++++|+|+.+|+ +|++++.++++.+.++ ++|++.+++.+
T Consensus 152 -~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~ 228 (350)
T cd08240 152 -LAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADVVVNGS 228 (350)
T ss_pred -HeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcEEecCC
Confidence 57788999999999997776677899999996 59999999999999999 7999998999999997 89998888887
Q ss_pred ChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337 134 EEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD 212 (269)
Q Consensus 134 ~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (269)
+. ++.+.+.+..++++|++||++|. ..+..++++|+++|+++.++..... ..........+++++.+.....
T Consensus 229 ~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~ 301 (350)
T cd08240 229 DP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSYVGS 301 (350)
T ss_pred Cc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEcccCC
Confidence 75 67777777665589999999995 7889999999999999999764321 1122233445777877766543
Q ss_pred cccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 213 HYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
.+++..++++++++.+++.....+++++++++++.+.+++..+|++++
T Consensus 302 -----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 302 -----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred -----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 367888999999999887666789999999999999998888999875
No 60
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.6e-30 Score=219.54 Aligned_cols=250 Identities=24% Similarity=0.335 Sum_probs=206.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe----------------------------------------------------ccc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG----------------------------------------------------MTG 31 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~----------------------------------------------------~g~ 31 (269)
-|++|+|+++|++++.+++||+|++ .|+
T Consensus 61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 140 (365)
T cd08278 61 HEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSS 140 (365)
T ss_pred cceeEEEEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccc
Confidence 4789999999999999999999983 278
Q ss_pred eeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024337 32 WEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS 110 (269)
Q Consensus 32 ~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~ 110 (269)
|++|+.++.++++++ |++++.. .++++++++.+||.++...+.++++++|+|+|+ |++|++++|+|+..|+ .++++
T Consensus 141 ~~~y~~v~~~~~~~i-P~~~s~~-~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~ 217 (365)
T cd08278 141 FATYAVVHERNVVKV-DKDVPLE-LLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAV 217 (365)
T ss_pred eeeEEEecchhEEEC-CCCCCHH-HhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence 999999999999999 9985543 478999999999999878788999999999975 9999999999999999 68899
Q ss_pred eCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCC
Q 024337 111 AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKP 189 (269)
Q Consensus 111 ~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 189 (269)
++++++.+.++ ++|++.+++++.. ++.+.+.+.++.++|+++||+|. ..+..++++++++|+++.+|.... ..
T Consensus 218 ~~~~~k~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~~ 291 (365)
T cd08278 218 DIVDSRLELAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPP----GA 291 (365)
T ss_pred eCCHHHHHHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCC----CC
Confidence 88999999888 8999989988876 77777877774489999999996 788999999999999999987421 11
Q ss_pred CCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee-eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 190 EGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY-VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
....+...++.+++++.++..... ...+.+..+++++.++.+.+ .+...+++++++++++.+.+++.. |++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 292 EVTLDVNDLLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred ccccCHHHHhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 223445556678888887765332 12567788999999998864 234578999999999999887754 77763
No 61
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.2e-30 Score=213.82 Aligned_cols=244 Identities=23% Similarity=0.291 Sum_probs=202.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG 80 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (269)
.|++|+|+++|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++++++.+.+||+++...... ++
T Consensus 57 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~ta~~~~~~~~~~-~~ 133 (305)
T cd08270 57 WDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVL-PDGVSFA-QAATLPVAGVTALRALRRGGPL-LG 133 (305)
T ss_pred ceeEEEEEEeCCCCCCCCCCCEEEEecCCcceeeEEEEchHHeEEC-CCCCCHH-HHHHhHhHHHHHHHHHHHhCCC-CC
Confidence 57889999999999999999999986 79999999999999999 8885544 5788999999999999665544 69
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK 160 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 160 (269)
++++|+|++|++|++++++++.+|++|+.+++++++.+.++ ++|++..++... + ..++++|+++||+|+.
T Consensus 134 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g~~ 203 (305)
T cd08270 134 RRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS--E-------LSGAPVDLVVDSVGGP 203 (305)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc--c-------ccCCCceEEEECCCcH
Confidence 99999999999999999999999999999999999999999 799875553221 1 1224799999999998
Q ss_pred hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhh--cceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeee
Q 024337 161 TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS--KRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVED 238 (269)
Q Consensus 161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 238 (269)
.+..++++++++|+++.+|.... ......+..+.. +++++.++.... +....+.+..+++++.++++.+.+.
T Consensus 204 ~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~ 277 (305)
T cd08270 204 QLARALELLAPGGTVVSVGSSSG-----EPAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIG 277 (305)
T ss_pred HHHHHHHHhcCCCEEEEEeccCC-----CcccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceec
Confidence 88999999999999999986431 112233444444 588888877653 2334567889999999999998777
Q ss_pred hccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 239 MAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 239 ~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
+.+++++++++++.+.+++..||+++++
T Consensus 278 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 278 WRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred cEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 8899999999999999988889999864
No 62
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.3e-30 Score=217.68 Aligned_cols=249 Identities=20% Similarity=0.219 Sum_probs=199.1
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe---------------------------------ccceeeEEEecCC--ceeecCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG---------------------------------MTGWEEYSLITAP--YLFKIQH 48 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~~p 48 (269)
-|++|+|+++|++++.+++||+|++ .|+|+||+.++.+ .++++ |
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~l-P 137 (351)
T cd08285 59 HEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPL-P 137 (351)
T ss_pred cceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEEC-C
Confidence 4788999999999999999999986 2789999999975 89999 8
Q ss_pred CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD 127 (269)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~ 127 (269)
++++.. +++.++..+.++|+++ ..++++++++|||+|+ |++|++++|+|+.+|+ .|+++++++++.+.++ ++|++
T Consensus 138 ~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~ 213 (351)
T cd08285 138 DGLTDE-QAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGAT 213 (351)
T ss_pred CCCCHH-HhhhhccchhhHHHHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCc
Confidence 885443 5778889999999997 6678999999999975 9999999999999999 6889988888999998 89999
Q ss_pred eeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccc--hHHHhhcce
Q 024337 128 EAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN--LMYLVSKRL 203 (269)
Q Consensus 128 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~ 203 (269)
++++++.. ++.+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.+|..... .....+ ......+..
T Consensus 214 ~~v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~ 288 (351)
T cd08285 214 DIVDYKNG-DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGED----DYLPIPREEWGVGMGHK 288 (351)
T ss_pred eEecCCCC-CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC----ceeecChhhhhhhcccc
Confidence 99998876 777888777765 89999999997 6889999999999999999864321 000111 111223344
Q ss_pred eeeeeeecccccchHHHHHHHHHHHHCCCeee---eeehccccccHHHHHHHHhcCCC-cceEEEEe
Q 024337 204 RMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY---VEDMAEGLESAPAALIGLFSGQN-VGKQVVAV 266 (269)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~ 266 (269)
++.+.... ...++++.+++++.+|++++ .....++++++++|++.+.+++. ..|++|++
T Consensus 289 ~i~~~~~~----~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 289 TINGGLCP----GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred EEEEeecC----CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 44433221 12466888999999999987 34456899999999999998874 67999864
No 63
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.98 E-value=3.7e-30 Score=214.51 Aligned_cols=254 Identities=23% Similarity=0.229 Sum_probs=204.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKH 79 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~ 79 (269)
.|++|+|+.+|++++.+++||+|+.. |+|++|+.++.+.++++ |++++.. +++.++..+.++|.++...+++++
T Consensus 63 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~l-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~ 140 (327)
T PRK10754 63 TEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAIL-PDAISFE-QAAASFLKGLTVYYLLRKTYEIKP 140 (327)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeC-CCCCCHH-HHHHHHHHHHHHHHHHHhhcCCCC
Confidence 57889999999999999999999754 79999999999999999 8885443 467788899999999877788999
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG 158 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g 158 (269)
+++++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++++++.+.. ++.+.+++.+++ ++|+++||+|
T Consensus 141 g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~ 218 (327)
T PRK10754 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDSVG 218 (327)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEECCc
Confidence 999999999999999999999999999999999999999998 8999888888776 788888888876 8999999999
Q ss_pred chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee-eeeeeccc---ccchHHHHHHHHHHHHCCCee
Q 024337 159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM-EGFIVLDH---YHLYPKFLEMIIPHIKEGKLV 234 (269)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~ 234 (269)
+.....++++++++|+++.+|.... .........+..++..+ .......+ +....+.+..+++++.+|.++
T Consensus 219 ~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 293 (327)
T PRK10754 219 KDTWEASLDCLQRRGLMVSFGNASG-----PVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIK 293 (327)
T ss_pred HHHHHHHHHHhccCCEEEEEccCCC-----CCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCee
Confidence 9888899999999999999986431 11111222222222111 11111111 122344567789999999998
Q ss_pred ee--eehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 235 YV--EDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 235 ~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
+. ..+.|++++++++++.+.+++..+|+|+.+
T Consensus 294 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 294 VDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred eecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 64 357899999999999999999899999863
No 64
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.98 E-value=7.5e-30 Score=211.48 Aligned_cols=254 Identities=26% Similarity=0.375 Sum_probs=212.5
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG 80 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (269)
.+++|+|..+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. ++++++..+.++|+++...+++.++
T Consensus 60 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~g 137 (320)
T cd05286 60 VEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKL-PDGISDE-TAAALLLQGLTAHYLLRETYPVKPG 137 (320)
T ss_pred cceeEEEEEECCCCCCCCCCCEEEEecCCCceeEEEEecHHHceeC-CCCCCHH-HHhhccchHHHHHHHHHHhcCCCCC
Confidence 47889999999999999999999985 69999999999999999 8885444 4778899999999999777889999
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG 159 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 159 (269)
++++|+|++|++|++++++++.+|++|+++++++++.+.++ ++|++++++..+. ++.+.+.+.+.+ ++|.++||+|+
T Consensus 138 ~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~ 215 (320)
T cd05286 138 DTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGK 215 (320)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECCCc
Confidence 99999999999999999999999999999999999999997 8999888887776 777888887766 89999999999
Q ss_pred hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc---ccchHHHHHHHHHHHHCCCeeee
Q 024337 160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKLVYV 236 (269)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~ 236 (269)
.....++++++++|+++.+|.... ......+..+..+++++.+.....+ +....+.+..+++++.++.+.+.
T Consensus 216 ~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 290 (320)
T cd05286 216 DTFEGSLDSLRPRGTLVSFGNASG-----PVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE 290 (320)
T ss_pred HhHHHHHHhhccCcEEEEEecCCC-----CCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc
Confidence 888899999999999999986432 1112233344477888766544332 23345567788899999988877
Q ss_pred eehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 237 EDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 237 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
....|++++++++++.+.+++..+|+++++
T Consensus 291 ~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 291 IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 667899999999999999888888998864
No 65
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.98 E-value=3.9e-30 Score=213.56 Aligned_cols=247 Identities=22% Similarity=0.288 Sum_probs=202.4
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHh
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV 74 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~ 74 (269)
.|++|+|+++|+ +.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++++++++.+||+++...
T Consensus 62 ~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~ 137 (320)
T cd08243 62 IEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAI-DSDLSWA-ELAALPETYYTAWGSLFRS 137 (320)
T ss_pred ceeEEEEEEecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeC-CCCCCHH-HHHhcchHHHHHHHHHHHh
Confidence 478899999995 579999999986 78999999999999999 8885443 5789999999999999887
Q ss_pred hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337 75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYF 154 (269)
Q Consensus 75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 154 (269)
.+++++++|+|+|++|++|++++++|+++|++|+++++++++.+.++ ++|++++++. .. ++.+.+.+. +.++|+++
T Consensus 138 ~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~vl 213 (320)
T cd08243 138 LGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAEQLRAA-PGGFDKVL 213 (320)
T ss_pred cCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHHHHh-CCCceEEE
Confidence 88999999999999999999999999999999999999999999998 8999877754 43 667777777 45899999
Q ss_pred eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHH--HhhcceeeeeeeecccccchHHHHHHHHHHHHCCC
Q 024337 155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMY--LVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK 232 (269)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (269)
||+|+..+..++++++++|+++.+|...... ......... .+.+++++.++.... ...+.++.+++++.++.
T Consensus 214 ~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 287 (320)
T cd08243 214 ELVGTATLKDSLRHLRPGGIVCMTGLLGGQW---TLEDFNPMDDIPSGVNLTLTGSSSGD---VPQTPLQELFDFVAAGH 287 (320)
T ss_pred ECCChHHHHHHHHHhccCCEEEEEccCCCCc---ccCCcchhhhhhhccceEEEecchhh---hhHHHHHHHHHHHHCCc
Confidence 9999988999999999999999998643210 000011111 235667776665432 22456888999999999
Q ss_pred eeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 233 LVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 233 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
+++.....+++++++++++.+.+++..+|+++
T Consensus 288 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 288 LDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred eecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 98776678999999999999998888888876
No 66
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.98 E-value=8.4e-30 Score=213.22 Aligned_cols=244 Identities=19% Similarity=0.221 Sum_probs=202.8
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
.+++|+|+++|++++.+++||+|++ .|+|++|+.++++ ++++ |++++.
T Consensus 59 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~-p~~~~~ 136 (337)
T cd08261 59 HELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLV-PEGLSL 136 (337)
T ss_pred cccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEEC-CCCCCH
Confidence 4678999999999999999999986 3789999999999 9999 998443
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~ 133 (269)
. +++.+ ..+.++++++ ...++.++++|||+|+ |++|.+++|+|+.+|++|+++.+++++.+.++ ++|++++++++
T Consensus 137 ~-~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~ 211 (337)
T cd08261 137 D-QAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVG 211 (337)
T ss_pred H-Hhhhh-chHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCc
Confidence 3 34444 6778888888 6788999999999974 89999999999999999999998999999997 89999999988
Q ss_pred ChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337 134 EEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (269)
Q Consensus 134 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (269)
+. ++.+.+.+.+++ ++|+++||.|+ ..+..++++++++|+++.++.... ........+..+++++.+...
T Consensus 212 ~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------~~~~~~~~~~~~~~~~~~~~~- 283 (337)
T cd08261 212 DE-DVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------PVTFPDPEFHKKELTILGSRN- 283 (337)
T ss_pred cc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------CCccCHHHHHhCCCEEEEecc-
Confidence 86 788888887766 89999999986 788899999999999999876431 112333455667777766531
Q ss_pred ccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcC-CCcceEEEEe
Q 024337 212 DHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSG-QNVGKQVVAV 266 (269)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~~ 266 (269)
...+.++.+++++.++.+++ .+...+++++++++++.+.++ ...+|+|+++
T Consensus 284 ----~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 284 ----ATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred ----CChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 23567888999999999987 666789999999999999988 4778999864
No 67
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.98 E-value=4.9e-30 Score=215.46 Aligned_cols=247 Identities=23% Similarity=0.213 Sum_probs=202.6
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe---------------------------------ccceeeEEEecCC--ceeecCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG---------------------------------MTGWEEYSLITAP--YLFKIQH 48 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~~p 48 (269)
.+++|+|+++|++++.+++||+|++ .|+|++|++++.+ .++++ |
T Consensus 60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-P 138 (347)
T cd05278 60 HEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKI-P 138 (347)
T ss_pred cceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEEC-C
Confidence 4688999999999999999999986 2789999999998 89999 9
Q ss_pred CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD 127 (269)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~ 127 (269)
++++.. ++++++.++.+||+++ ...+++++++|+|.|+ |++|++++|+|+.+|+ +|+++.+++++.+.++ ++|++
T Consensus 139 ~~~~~~-~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~ 214 (347)
T cd05278 139 DGLPDE-DALMLSDILPTGFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGAT 214 (347)
T ss_pred CCCCHH-HHhhhcchhhheeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCc
Confidence 885433 4788899999999998 6788999999999765 9999999999999997 8999988888888888 89998
Q ss_pred eeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee
Q 024337 128 EAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM 205 (269)
Q Consensus 128 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (269)
.++++++. ++.+.+++.+++ ++|++|||+|+ ..+..++++|+++|+++.+|..... .........+.+++++
T Consensus 215 ~vi~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~ 288 (347)
T cd05278 215 DIINPKNG-DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKP-----DPLPLLGEWFGKNLTF 288 (347)
T ss_pred EEEcCCcc-hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCC-----cccCccchhhhceeEE
Confidence 89988876 787888877765 89999999997 7889999999999999998754321 1001112334677777
Q ss_pred eeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCC-cceEEEEe
Q 024337 206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQN-VGKQVVAV 266 (269)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~ 266 (269)
.+..... .+.++.+++++.++.+++. ....+++++++++++.+.+++. .+|+++++
T Consensus 289 ~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 289 KTGLVPV-----RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred EeeccCc-----hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 6654322 5678889999999988863 4567899999999999988776 67888763
No 68
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.97 E-value=1e-29 Score=216.11 Aligned_cols=248 Identities=23% Similarity=0.241 Sum_probs=202.6
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe--------------------------------------------------cccee
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------------------MTGWE 33 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------------------~g~~~ 33 (269)
.|++|+|+++|++++.+++||+|+. .|+|+
T Consensus 60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 139 (386)
T cd08283 60 HEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQA 139 (386)
T ss_pred ccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeE
Confidence 5789999999999999999999965 26899
Q ss_pred eEEEecCC--ceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEE
Q 024337 34 EYSLITAP--YLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGS 110 (269)
Q Consensus 34 ~~~~v~~~--~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~ 110 (269)
||++++.+ .++++ |++++.. ++++++..+.+||+++ ..+++.++++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus 140 ~~~~v~~~~~~~~~l-p~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~ 215 (386)
T cd08283 140 EYVRVPFADVGPFKI-PDDLSDE-KALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAI 215 (386)
T ss_pred EEEEcccccCeEEEC-CCCCCHH-HHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE
Confidence 99999988 89999 9885443 5778899999999999 7788999999999975 9999999999999998 69999
Q ss_pred eCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCch----------------------hHhhhHh
Q 024337 111 AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGK----------------------TLDAVLP 167 (269)
Q Consensus 111 ~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~----------------------~~~~~~~ 167 (269)
++++++.+.++ +++...++++....++.+.+.+.+++ ++|++|||+|++ .+..+++
T Consensus 216 ~~~~~~~~~~~-~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (386)
T cd08283 216 DRVPERLEMAR-SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQ 294 (386)
T ss_pred cCCHHHHHHHH-HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHH
Confidence 99999999999 77444677776641277778887776 899999999752 5788999
Q ss_pred hhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeee--eehcccccc
Q 024337 168 NMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLES 245 (269)
Q Consensus 168 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~ 245 (269)
+++++|+++.+|.... ......+...+.+++++.+.... ..+.+..+++++.++.+.+. +...+++++
T Consensus 295 ~l~~~G~iv~~g~~~~-----~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~ 364 (386)
T cd08283 295 AVRKGGTVSIIGVYGG-----TVNKFPIGAAMNKGLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITHRLPLED 364 (386)
T ss_pred HhccCCEEEEEcCCCC-----CcCccCHHHHHhCCcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEEEecHHH
Confidence 9999999999986432 11223444567888888876432 25678889999999998863 556789999
Q ss_pred HHHHHHHHhcCC-CcceEEEEe
Q 024337 246 APAALIGLFSGQ-NVGKQVVAV 266 (269)
Q Consensus 246 ~~~a~~~~~~~~-~~gkvvv~~ 266 (269)
+++|++.+.++. ..+|+++++
T Consensus 365 ~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 365 APEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred HHHHHHHHHhCCCCeEEEEecC
Confidence 999999998876 458999853
No 69
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.97 E-value=1.1e-29 Score=212.56 Aligned_cols=245 Identities=25% Similarity=0.323 Sum_probs=206.1
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
.+++|+|..+|++++.+++||+|+. .|+|++|+.++.+.++++ |++++.
T Consensus 62 ~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~ 140 (338)
T cd08254 62 HEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPV-PDGVPF 140 (338)
T ss_pred ccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEEC-CCCCCH
Confidence 4688999999999999999999986 278999999999999999 888544
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~ 133 (269)
. ++++++.++.+||+++....+++++++|+|.| +|++|++++++|+.+|++|+++++++++.+.++ ++|.+++++..
T Consensus 141 ~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~ 217 (338)
T cd08254 141 A-QAAVATDAVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSL 217 (338)
T ss_pred H-HhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCC
Confidence 3 57889999999999998878899999999976 599999999999999999999999999999998 89998888877
Q ss_pred ChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337 134 EEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (269)
Q Consensus 134 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (269)
+. ...+.+ +..++ ++|+++||+|. ..+..++++|+++|+++.++.... ....+...++.++.++.++...
T Consensus 218 ~~-~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~ 289 (338)
T cd08254 218 DD-SPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------KLTVDLSDLIARELRIIGSFGG 289 (338)
T ss_pred Cc-CHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------CCccCHHHHhhCccEEEEeccC
Confidence 65 555556 44444 89999999985 688999999999999999976431 1223445677788887776543
Q ss_pred ccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
. .+.+..++++++++.+.+. ...+++++++++++.+.+++..+|+|+++
T Consensus 290 ~-----~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 T-----PEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred C-----HHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 2 5678889999999998876 56789999999999999999899999874
No 70
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.97 E-value=1e-29 Score=213.20 Aligned_cols=244 Identities=22% Similarity=0.238 Sum_probs=201.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCc-----eeecCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPY-----LFKIQH 48 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~-----~~~~~p 48 (269)
.+++|+|+++|++++.+++||+|+++ |+|++|+.++.+. ++++ |
T Consensus 59 ~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~l-P 137 (343)
T cd08235 59 HEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKL-P 137 (343)
T ss_pred cceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEEC-C
Confidence 46889999999999999999999974 7899999999998 9999 9
Q ss_pred CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCc
Q 024337 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFD 127 (269)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~ 127 (269)
+++ ++..|++..++.+||+++.. .+++++++|+|+| +|++|++++++|+..|++ |+++.+++++.+.++ ++|.+
T Consensus 138 ~~~--~~~~aa~~~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~ 212 (343)
T cd08235 138 DNV--SFEEAALVEPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGAD 212 (343)
T ss_pred CCC--CHHHHHhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCc
Confidence 984 43333344788999999954 5899999999997 599999999999999998 999988999999998 89998
Q ss_pred eeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee
Q 024337 128 EAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM 205 (269)
Q Consensus 128 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (269)
+++++++. ++.+.+.+.+++ ++|+++||+|+ ..+...+++++++|+++.++..... ......+.....+++.+
T Consensus 213 ~~~~~~~~-~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~l 287 (343)
T cd08235 213 YTIDAAEE-DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKG----STVNIDPNLIHYREITI 287 (343)
T ss_pred EEecCCcc-CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCC----CCcccCHHHHhhCceEE
Confidence 89988886 888888887766 89999999996 5888999999999999998864321 11223345566677777
Q ss_pred eeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
.+..... .+.++.+++++.++.+.+ .+...+++++++++++.+.+++ .+|+|+
T Consensus 288 ~~~~~~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi 342 (343)
T cd08235 288 TGSYAAS-----PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVI 342 (343)
T ss_pred EEEecCC-----hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEe
Confidence 6655432 456888899999998863 3556789999999999999998 889986
No 71
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.97 E-value=1.3e-29 Score=212.11 Aligned_cols=245 Identities=24% Similarity=0.305 Sum_probs=201.8
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
.+++|+|.++|++++.|++||+|++ .|+|+||+.++.++++++ |++++
T Consensus 59 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~ 137 (338)
T PRK09422 59 HEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKV-PEGLD 137 (338)
T ss_pred cccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeC-CCCCC
Confidence 4789999999999999999999985 378999999999999999 98854
Q ss_pred cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337 53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDKVDLLKNKFGFDEAFN 131 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~-~G~~V~~~~~s~~~~~~~~~~~g~~~~~~ 131 (269)
.. ++++++..+.|||+++ ..++++++++|+|+|+ |++|++++++|+. .|++|+++++++++.+.++ ++|++.+++
T Consensus 138 ~~-~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~ 213 (338)
T PRK09422 138 PA-QASSITCAGVTTYKAI-KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTIN 213 (338)
T ss_pred HH-HeehhhcchhHHHHHH-HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEec
Confidence 43 5788999999999998 6788999999999995 9999999999998 4999999999999999998 999988888
Q ss_pred cCC-hhhHHHHHHHHCCCCcc-EEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeee
Q 024337 132 YKE-EADLNAALKRYFPEGID-VYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFI 209 (269)
Q Consensus 132 ~~~-~~~~~~~i~~~~~~~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (269)
++. . ++.+.+++.++ ++| +++++.++..+..++++++++|+++.+|.... ....+......+..++.++.
T Consensus 214 ~~~~~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~ 285 (338)
T PRK09422 214 SKRVE-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------SMDLSIPRLVLDGIEVVGSL 285 (338)
T ss_pred ccccc-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------CceecHHHHhhcCcEEEEec
Confidence 764 4 66677777665 688 55555556889999999999999999986421 11234455566777776654
Q ss_pred ecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337 210 VLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (269)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 267 (269)
... .+.++.+++++.+|.+.+.+. .+++++++++++.+.+++..||+++.+.
T Consensus 286 ~~~-----~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 286 VGT-----RQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred CCC-----HHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 322 466888999999999876654 5799999999999999998899998753
No 72
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=8.2e-30 Score=209.94 Aligned_cols=251 Identities=21% Similarity=0.300 Sum_probs=205.8
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec-----cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM-----TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK 78 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (269)
.+++|+|.++|++++++++||+|+++ |+|++|++++.+.++++ |++++.. ++++++..+.++|+++ +..+++
T Consensus 43 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~aa~~~~~~~ta~~~l-~~~~~~ 119 (303)
T cd08251 43 FEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPEDQVVRK-PASLSFE-EACALPVVFLTVIDAF-ARAGLA 119 (303)
T ss_pred ceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEEccHHHeEEC-CCCCCHH-HHHHhHHHHHHHHHHH-HhcCCC
Confidence 46889999999999999999999886 79999999999999999 9885444 5788899999999998 578899
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENV 157 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~ 157 (269)
++++++|+++++++|++++++++.+|++|+++++++++.+.++ ++|++.+++.... ++...+.+.+++ ++|.++||+
T Consensus 120 ~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~ 197 (303)
T cd08251 120 KGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTL 197 (303)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEECC
Confidence 9999999999999999999999999999999999999999997 8999889988776 777888887776 899999999
Q ss_pred CchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc----ccchHHHHHHHHHHHHCCCe
Q 024337 158 GGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----YHLYPKFLEMIIPHIKEGKL 233 (269)
Q Consensus 158 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~ 233 (269)
++..+..++++++++|+++.++..... ....... ..+.+++.+....+... +....+.+.++.+++.++.+
T Consensus 198 ~~~~~~~~~~~l~~~g~~v~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 272 (303)
T cd08251 198 SGEAIQKGLNCLAPGGRYVEIAMTALK----SAPSVDL-SVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGEL 272 (303)
T ss_pred cHHHHHHHHHHhccCcEEEEEeccCCC----ccCccCh-hHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCc
Confidence 988889999999999999998764311 0111122 22334444444333221 22345668888999999998
Q ss_pred eeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
++.....+++++++++++.+.+++..+|+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 273 RPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred cCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 8777778999999999999998888888874
No 73
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.97 E-value=1.6e-29 Score=210.46 Aligned_cols=250 Identities=23% Similarity=0.357 Sum_probs=197.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHh
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV 74 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~ 74 (269)
.|++|+|+++ +++.+++||+|++. |+|++|+.++.+.++++ |++++.. +++.+++.+.++|.++...
T Consensus 63 ~e~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~ 138 (325)
T cd05280 63 IDAAGTVVSS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPL-PEGLSLR-EAMILGTAGFTAALSVHRL 138 (325)
T ss_pred cccEEEEEEe--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEEC-CCCCCHH-HHHhhHHHHHHHHHHHHHH
Confidence 4678999888 56789999999974 78999999999999999 8885544 5788999999999998655
Q ss_pred hcC--C-CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337 75 CSA--K-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID 151 (269)
Q Consensus 75 ~~~--~-~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d 151 (269)
.+. . .+++|+|+|++|++|++++++|+.+|++|+++++++++.+.++ ++|++++++.++. . ....+...++++|
T Consensus 139 ~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~d 215 (325)
T cd05280 139 EDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL-L-DESKKPLLKARWA 215 (325)
T ss_pred hhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH-H-HHHHHHhcCCCcc
Confidence 433 5 3579999999999999999999999999999999999999998 8999888876542 1 2222333334799
Q ss_pred EEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccc-cchHHHHHHHHHHHHC
Q 024337 152 VYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-HLYPKFLEMIIPHIKE 230 (269)
Q Consensus 152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 230 (269)
+++||+|+..+..++++++++|+++.+|..... .....+..++.+++++.+....... ....+.++.+.+++..
T Consensus 216 ~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (325)
T cd05280 216 GAIDTVGGDVLANLLKQTKYGGVVASCGNAAGP-----ELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKP 290 (325)
T ss_pred EEEECCchHHHHHHHHhhcCCCEEEEEecCCCC-----ccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhc
Confidence 999999998999999999999999999875321 1123334455788888887764432 2334556667777777
Q ss_pred CCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 231 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
+. .+.+..++++++++++++.+.+++..||+|+++
T Consensus 291 ~~-~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 291 DL-LEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred CC-ccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 73 344667899999999999999999899999864
No 74
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.97 E-value=1.7e-29 Score=211.94 Aligned_cols=244 Identities=21% Similarity=0.224 Sum_probs=201.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec----------------------------------cceeeEEEecCC--ceeecC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM----------------------------------TGWEEYSLITAP--YLFKIQ 47 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------g~~~~~~~v~~~--~~~~~~ 47 (269)
.|++|+|.++|++++.+++||+|++. |+|++|+.++.+ .++++
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~- 137 (344)
T cd08284 59 HEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKL- 137 (344)
T ss_pred cceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEEC-
Confidence 46889999999999999999999872 789999999975 99999
Q ss_pred CCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC
Q 024337 48 HTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF 126 (269)
Q Consensus 48 p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~ 126 (269)
|++++.. +++++++++.|||+++. ..++.++++|+|+| +|++|++++++|+.+|+ +|++++.++++.+.++ ++|+
T Consensus 138 p~~l~~~-~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~ 213 (344)
T cd08284 138 PDGLSDE-AALLLGDILPTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGA 213 (344)
T ss_pred CCCCCHH-HhhhhcCchHHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCC
Confidence 9885443 57889999999999995 47899999999997 59999999999999997 8999988888888888 8997
Q ss_pred ceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337 127 DEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (269)
Q Consensus 127 ~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (269)
. .++.+.. ++...+.+.+++ ++|++|||+|+ ..+..++++++++|+++.+|.... ..........+.++++
T Consensus 214 ~-~~~~~~~-~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~ 286 (344)
T cd08284 214 E-PINFEDA-EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTA-----EEFPFPGLDAYNKNLT 286 (344)
T ss_pred e-EEecCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCC-----CCccccHHHHhhcCcE
Confidence 5 5676665 777788877765 89999999996 788999999999999999987532 1122334556777887
Q ss_pred eeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
+.+.. ....+.+..+++++.++.+++ .+...+++++++++++.+.+++. +|+|++
T Consensus 287 ~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 287 LRFGR-----CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred EEEec-----CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 76442 123567889999999998875 35677899999999999988777 899875
No 75
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.97 E-value=2.3e-29 Score=212.53 Aligned_cols=249 Identities=19% Similarity=0.260 Sum_probs=200.1
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW 32 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (269)
.|++|+|.++|++++.+++||+|+++ |+|
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ 138 (365)
T cd05279 59 HEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTF 138 (365)
T ss_pred cceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccc
Confidence 46889999999999999999999853 589
Q ss_pred eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEe
Q 024337 33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSA 111 (269)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~ 111 (269)
++|+.++.+.++++ |++++.. +++.+++++.+||+++...++++++++|+|+|+ |++|++++++|+.+|++ |++++
T Consensus 139 a~~~~v~~~~~~~l-P~~~~~~-~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~ 215 (365)
T cd05279 139 AEYTVVSEISLAKI-DPDAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVD 215 (365)
T ss_pred cceEEecCCceEEC-CCCCCHH-HhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Confidence 99999999999999 9985544 477888899999999878889999999999975 99999999999999995 77777
Q ss_pred CCHHHHHHHHHHcCCceeEecCChh-hHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhh-cCCEEEEEeccccccCCC
Q 024337 112 GSKDKVDLLKNKFGFDEAFNYKEEA-DLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMK-IRGRIAACGMISQYNLDK 188 (269)
Q Consensus 112 ~s~~~~~~~~~~~g~~~~~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~ 188 (269)
+++++.+.++ ++|++++++..+.. ++.+.+.+.+++++|+++|++|. ..+..++++++ ++|+++.+|.... .
T Consensus 216 ~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----~ 290 (365)
T cd05279 216 INKDKFEKAK-QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS----G 290 (365)
T ss_pred CCHHHHHHHH-HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----C
Confidence 7999999997 99998888766520 35566777665689999999986 88899999999 9999999876421 1
Q ss_pred CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
.....+...+ .++.++.|.....+ ...+.+..+++++.++.+++ ...++++++++++|++.+.+++.. |+++
T Consensus 291 ~~~~~~~~~~-~~~~~l~g~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 291 TEATLDPNDL-LTGRTIKGTVFGGW--KSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred CceeeCHHHH-hcCCeEEEEeccCC--chHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 1223344444 56677777655433 23567888999999998875 366788999999999999877654 5554
No 76
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.97 E-value=1.5e-29 Score=211.45 Aligned_cols=244 Identities=25% Similarity=0.335 Sum_probs=200.9
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
.|++|+|+++|++++.+++||+|++. |+|++|+.++.+.++++ |++++.
T Consensus 60 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~ 138 (334)
T PRK13771 60 HEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKV-PPNVSD 138 (334)
T ss_pred ccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEEC-CCCCCH
Confidence 47889999999999899999999874 68999999999999999 888554
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~ 133 (269)
. +++.+++.+.++|+++... ++.++++++|+|++|++|++++++++++|++|+++++++++.+.++ ++ ++++++++
T Consensus 139 ~-~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~ 214 (334)
T PRK13771 139 E-GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS 214 (334)
T ss_pred H-HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch
Confidence 4 5788899999999999665 8999999999999999999999999999999999999999999987 77 66666554
Q ss_pred ChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc
Q 024337 134 EEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH 213 (269)
Q Consensus 134 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (269)
++.+.+++. +++|+++||+|+.....+++.++++|+++.+|..... ..........+.+++++.+...
T Consensus 215 ---~~~~~v~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~--- 282 (334)
T PRK13771 215 ---KFSEEVKKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPS----PTYSLRLGYIILKDIEIIGHIS--- 282 (334)
T ss_pred ---hHHHHHHhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCC----CCcccCHHHHHhcccEEEEecC---
Confidence 344455554 3699999999998889999999999999999874321 1101222333567778777632
Q ss_pred ccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 214 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
...+.++.+++++.++.+++.+...+++++++++++.+.+++..+|+++.+
T Consensus 283 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 283 --ATKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred --CCHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 236678899999999999877778899999999999999888889999865
No 77
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.97 E-value=3e-29 Score=211.78 Aligned_cols=249 Identities=21% Similarity=0.300 Sum_probs=204.9
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe--------------------------------------------------cccee
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------------------MTGWE 33 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------------------~g~~~ 33 (269)
.+++|+|+.+|++++.+++||+|++ .|+|+
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 138 (363)
T cd08279 59 HEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFA 138 (363)
T ss_pred ccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccce
Confidence 4778999999999999999999987 27899
Q ss_pred eEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeC
Q 024337 34 EYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAG 112 (269)
Q Consensus 34 ~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~ 112 (269)
+|+.++.+.++++ |++++.. +++.+++.+.+||.++...+++.++++|+|+|+ |++|++++++|+..|++ |+++++
T Consensus 139 ~~~~~~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~ 215 (363)
T cd08279 139 EYTVVPEASVVKI-DDDIPLD-RAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDP 215 (363)
T ss_pred eeEEeccccEEEC-CCCCChH-HeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcC
Confidence 9999999999999 9885544 577888899999999888889999999999965 99999999999999995 999998
Q ss_pred CHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCC
Q 024337 113 SKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPE 190 (269)
Q Consensus 113 s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 190 (269)
++++.+.++ ++|++++++++.. ++...+.+.+++ ++|+++||+|+ ..+..++++++++|+++.++.... ...
T Consensus 216 ~~~~~~~~~-~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~ 289 (363)
T cd08279 216 VPEKLELAR-RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP----GET 289 (363)
T ss_pred CHHHHHHHH-HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC----Ccc
Confidence 999999997 8999889988876 777888877755 89999999995 788999999999999999976431 112
Q ss_pred CccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEE
Q 024337 191 GVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQV 263 (269)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv 263 (269)
.......+..++..+.++..... ...+.++.+++++.++.+.+ .+.+.+++++++++++.+.+++..+.++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 290 VSLPALELFLSEKRLQGSLYGSA--NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cccCHHHHhhcCcEEEEEEecCc--CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 22344455556776666554221 23567888999999999875 3567899999999999999888765554
No 78
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.97 E-value=1.7e-29 Score=210.37 Aligned_cols=251 Identities=25% Similarity=0.363 Sum_probs=193.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHh
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV 74 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~ 74 (269)
-|++|+|++. +++.+++||+|+.. |+|+||+.++.+.++++ |++++.. +++.+++.+.+||.++...
T Consensus 63 ~e~~G~V~~~--~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~ 138 (326)
T cd08289 63 IDLAGTVVES--NDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPL-PKGLTLK-EAMILGTAGFTAALSIHRL 138 (326)
T ss_pred cceeEEEEEc--CCCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEEC-CCCCCHH-HHhhhhhHHHHHHHHHHHH
Confidence 3678888875 45779999999874 79999999999999999 8885443 4778888999999988544
Q ss_pred hc---CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337 75 CS---AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID 151 (269)
Q Consensus 75 ~~---~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d 151 (269)
.+ ..++++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++.+++.++. ..+.+.+..++++|
T Consensus 139 ~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~d 215 (326)
T cd08289 139 EENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL--QEESIKPLEKQRWA 215 (326)
T ss_pred HhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhH--HHHHHHhhccCCcC
Confidence 32 345789999999999999999999999999999999999999998 8999888887653 34455555444899
Q ss_pred EEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHC
Q 024337 152 VYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKE 230 (269)
Q Consensus 152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 230 (269)
+++||+|+..+..++++++++|+++.+|.... ......+..++.+++++.+...... .....+.+..+...+..
T Consensus 216 ~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (326)
T cd08289 216 GAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGG-----GEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKP 290 (326)
T ss_pred EEEECCcHHHHHHHHHHhhcCCEEEEEeecCC-----CCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCc
Confidence 99999999889999999999999999987532 1112234556688898888754321 11123334444444332
Q ss_pred CCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 231 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
+.+...+.++++++++++|++.+.+++..||+++++
T Consensus 291 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 291 TQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 333334577899999999999999999889999864
No 79
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=2.9e-29 Score=207.74 Aligned_cols=247 Identities=20% Similarity=0.197 Sum_probs=202.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec--cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM--TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGE 81 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~ 81 (269)
.+++|+|+++|++++.+++||+|+++ |+|++|+.++.+.++++ |+++ . .++.+..++.++++++. .+++++++
T Consensus 57 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~l-P~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~ 131 (312)
T cd08269 57 HEGWGRVVALGPGVRGLAVGDRVAGLSGGAFAEYDLADADHAVPL-PSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGK 131 (312)
T ss_pred eeeEEEEEEECCCCcCCCCCCEEEEecCCcceeeEEEchhheEEC-CCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCC
Confidence 46889999999999999999999986 79999999999999999 8874 2 23322378889999985 78899999
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG 159 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 159 (269)
+++|+| +|++|.+++++|+++|++ |+++++++++.++++ ++|++.+++.+.. ++.+.+.+.+++ ++|+++||.|+
T Consensus 132 ~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~ 208 (312)
T cd08269 132 TVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGH 208 (312)
T ss_pred EEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCC
Confidence 999997 599999999999999998 999999988988888 9999888887765 788888887776 89999999986
Q ss_pred -hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeee--e
Q 024337 160 -KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--V 236 (269)
Q Consensus 160 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~ 236 (269)
.....++++++++|+++.+|.... .....++..+..++..+.++...+ +....+.++.+++++.++.+.+ .
T Consensus 209 ~~~~~~~~~~l~~~g~~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 282 (312)
T cd08269 209 QWPLDLAGELVAERGRLVIFGYHQD-----GPRPVPFQTWNWKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSL 282 (312)
T ss_pred HHHHHHHHHHhccCCEEEEEccCCC-----CCcccCHHHHhhcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhh
Confidence 678899999999999999986431 112233445666777776654333 2234578899999999999886 3
Q ss_pred eehccccccHHHHHHHHhcCCC-cceEEE
Q 024337 237 EDMAEGLESAPAALIGLFSGQN-VGKQVV 264 (269)
Q Consensus 237 ~~~~~~~~~~~~a~~~~~~~~~-~gkvvv 264 (269)
+.+.+++++++++++.+.+++. .+|+++
T Consensus 283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 283 LTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 5577899999999999998865 478876
No 80
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.97 E-value=1.3e-29 Score=212.11 Aligned_cols=246 Identities=22% Similarity=0.263 Sum_probs=200.7
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec-----------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHH
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM-----------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFY 72 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~ 72 (269)
.|++|+|+.+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. .++.+++++.+||+++.
T Consensus 60 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~ 137 (339)
T cd08249 60 CDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKI-PDNISFE-EAATLPVGLVTAALALF 137 (339)
T ss_pred eeeeEEEEEeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEEC-CCCCCHH-HceecchHHHHHHHHHh
Confidence 46789999999999999999999986 79999999999999999 8885444 47788999999999987
Q ss_pred HhhcC----------CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHH
Q 024337 73 EVCSA----------KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAAL 142 (269)
Q Consensus 73 ~~~~~----------~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i 142 (269)
+..++ .++++++|+|++|++|++++++++.+|++|++++ ++++.+.++ ++|+++++++.+. ++.+.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~~-~~~~~l 214 (339)
T cd08249 138 QKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHDP-DVVEDI 214 (339)
T ss_pred ccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCCc-hHHHHH
Confidence 66554 7899999999999999999999999999999988 668889997 8999889998876 788888
Q ss_pred HHHCCCCccEEEeCCCc-hhHhhhHhhhhc--CCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec-------c
Q 024337 143 KRYFPEGIDVYFENVGG-KTLDAVLPNMKI--RGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL-------D 212 (269)
Q Consensus 143 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 212 (269)
++.+++++|+++|++|. ..+..+++++++ +|+++.++..... . .+..+.+....... .
T Consensus 215 ~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~-----~-------~~~~~~~~~~~~~~~~~~~~~~ 282 (339)
T cd08249 215 RAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEE-----T-------EPRKGVKVKFVLGYTVFGEIPE 282 (339)
T ss_pred HHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCcc-----c-------cCCCCceEEEEEeeeecccccc
Confidence 77776689999999998 899999999999 9999999764321 0 01112222222111 1
Q ss_pred cccchHHHHHHHHHHHHCCCeeeeeehccc--cccHHHHHHHHhcCC-CcceEEEEe
Q 024337 213 HYHLYPKFLEMIIPHIKEGKLVYVEDMAEG--LESAPAALIGLFSGQ-NVGKQVVAV 266 (269)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~a~~~~~~~~-~~gkvvv~~ 266 (269)
.+......++.+.+++.++.+.+.....++ ++++++|++.+..++ ..+|+|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 283 DREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred cccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 122344678889999999999876556677 999999999999888 889999874
No 81
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.97 E-value=3.8e-29 Score=207.78 Aligned_cols=253 Identities=28% Similarity=0.396 Sum_probs=212.5
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec--------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM--------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC 75 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~ 75 (269)
.|++|+|.++|++++.+++||+|+++ |++++|+.++.+.++++ |++++.. +++++++++.+||+++....
T Consensus 63 ~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~~a~~~l~~~~ 140 (325)
T cd08253 63 SDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPL-PDGVSFE-QGAALGIPALTAYRALFHRA 140 (325)
T ss_pred cceEEEEEeeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHh
Confidence 46889999999999999999999874 78999999999999999 8885444 57889999999999998778
Q ss_pred cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEE
Q 024337 76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYF 154 (269)
Q Consensus 76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi 154 (269)
++.++++++|+|+++++|++++++++..|++|+++++++++.+.+. ++|++++++.... ++.+.+.+.+++ ++|+++
T Consensus 141 ~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi 218 (325)
T cd08253 141 GAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLADRILAATAGQGVDVII 218 (325)
T ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEEE
Confidence 9999999999999999999999999999999999999999999998 8999888888776 777778777665 899999
Q ss_pred eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCCCe
Q 024337 155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEGKL 233 (269)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ 233 (269)
||+|+......+++++++|+++.++.... ........++.++.++.+...... +....+.++.+.+++.++.+
T Consensus 219 ~~~~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 292 (325)
T cd08253 219 EVLANVNLAKDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGAL 292 (325)
T ss_pred ECCchHHHHHHHHhhCCCCEEEEEeecCC------cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCc
Confidence 99999888889999999999999986431 112233345677777777654332 23445667788888999988
Q ss_pred eeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 234 VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 234 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
++.....+++++++++++.+.++...+|+++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 293 RPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred cCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 877778899999999999999988889999863
No 82
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=2.6e-29 Score=210.64 Aligned_cols=244 Identities=20% Similarity=0.211 Sum_probs=193.6
Q ss_pred cccceEEEEeccCCCC-CCCCCeEEec--------------------cceeeEEEecCCceeecCCCCCCcchhhhhcCC
Q 024337 4 ISGYGVAKVLDSENPE-FSKGDLVWGM--------------------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGM 62 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~-~~~Gd~V~~~--------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~ 62 (269)
.|++|+|+++|++++. +++||+|+++ |+|+||+.++.+.++++ |+++ +++.++++.
T Consensus 69 ~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~--s~~~a~~~~ 145 (341)
T cd08262 69 HEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRV-PDGL--SMEDAALTE 145 (341)
T ss_pred cceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEEC-CCCC--CHHHhhhhh
Confidence 4678999999999997 9999999975 78999999999999999 8884 444445778
Q ss_pred cchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEecCChhhHHH-
Q 024337 63 PGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNA- 140 (269)
Q Consensus 63 ~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~- 140 (269)
++.+||+++ ..++++++++|+|+|+ |++|.+++|+|+.+|++ +++++.++++.++++ ++|++++++++.. +..+
T Consensus 146 ~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~ 221 (341)
T cd08262 146 PLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SPFAA 221 (341)
T ss_pred hHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CHHHH
Confidence 889999996 6789999999999975 99999999999999996 667777888888888 8999888887653 3221
Q ss_pred --HHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccc
Q 024337 141 --ALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHL 216 (269)
Q Consensus 141 --~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (269)
.+.+..++ ++|+++||+|+ ..+..++++++++|+++.+|.... . ........+.++.++.+.....
T Consensus 222 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~---- 291 (341)
T cd08262 222 WAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCME-----S-DNIEPALAIRKELTLQFSLGYT---- 291 (341)
T ss_pred HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC-----C-CccCHHHHhhcceEEEEEeccc----
Confidence 23344444 89999999998 578899999999999999986431 1 1111222245666666543322
Q ss_pred hHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 217 YPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 217 ~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
.+.++.+++++.+|.+.+. +.+.+++++++++++.+.+++..+|+|++
T Consensus 292 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 292 -PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred -HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 4578889999999998753 45788999999999999999888999874
No 83
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.97 E-value=2.8e-29 Score=210.53 Aligned_cols=250 Identities=22% Similarity=0.275 Sum_probs=202.5
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
.+++|+|+.+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.
T Consensus 58 ~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-P~~~~~ 136 (343)
T cd08236 58 HEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKI-PDHVDY 136 (343)
T ss_pred cceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEEC-cCCCCH
Confidence 47889999999999999999999874 78999999999999999 888443
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
. +++.+ ..+.+||+++. ..+++++++|+|+|+ |.+|.+++|+|+++|++ |+++++++++.+.++ ++|++.++++
T Consensus 137 ~-~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~ 211 (343)
T cd08236 137 E-EAAMI-EPAAVALHAVR-LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINP 211 (343)
T ss_pred H-HHHhc-chHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecC
Confidence 3 34555 67889999995 778999999999975 99999999999999996 999999999999987 8999888988
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337 133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (269)
++. . .+.+.+..++ ++|+++||.|. ..+..++++|+++|+++.+|..... .......+..++.+++++.++..
T Consensus 212 ~~~-~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 286 (343)
T cd08236 212 KEE-D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWN 286 (343)
T ss_pred ccc-c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEee
Confidence 876 6 6677777766 79999999986 6789999999999999999864320 00112234456678888888776
Q ss_pred cccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhc-CCCcceEEE
Q 024337 211 LDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFS-GQNVGKQVV 264 (269)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvv 264 (269)
........+.++.+.+++.++.+. +.+...+++++++++++.+.+ ++..+|+|+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 287 SYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 433223456688889999999875 345577899999999999998 666788774
No 84
>PRK10083 putative oxidoreductase; Provisional
Probab=99.97 E-value=3.4e-29 Score=209.69 Aligned_cols=245 Identities=17% Similarity=0.157 Sum_probs=196.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEE---------------------------ec---cceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVW---------------------------GM---TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~---------------------------~~---g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
-|++|+|+.+|++++.+++||+|+ ++ |+|+||+.++.+.++++ |+++
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~-- 135 (339)
T PRK10083 59 HEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRI-PDAI-- 135 (339)
T ss_pred cceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEEC-cCCC--
Confidence 367899999999999999999998 33 78999999999999999 8884
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHH-cCCE-EEEEeCCHHHHHHHHHHcCCceeEe
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKL-LGCY-VVGSAGSKDKVDLLKNKFGFDEAFN 131 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~-~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~ 131 (269)
+++.+++..++.++|+++ ..++++++++|+|+| +|++|++++|+|+. +|++ ++++++++++.+.++ ++|++.+++
T Consensus 136 ~~~~a~~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~ 212 (339)
T PRK10083 136 ADQYAVMVEPFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVIN 212 (339)
T ss_pred CHHHHhhhchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEec
Confidence 444455777888888655 668899999999999 59999999999996 6994 777888888999998 999999998
Q ss_pred cCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337 132 YKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (269)
Q Consensus 132 ~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (269)
+++. ++.+.+... +.++|++|||+|. ..+..++++++++|+++.+|.... ....+...+..+++++.+...
T Consensus 213 ~~~~-~~~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~ 284 (339)
T PRK10083 213 NAQE-PLGEALEEK-GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE------PSEIVQQGITGKELSIFSSRL 284 (339)
T ss_pred Cccc-cHHHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CceecHHHHhhcceEEEEEec
Confidence 8765 666666432 1257899999995 689999999999999999987431 112233444557777666543
Q ss_pred cccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCC-CcceEEEEecC
Q 024337 211 LDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQ-NVGKQVVAVAP 268 (269)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~~~ 268 (269)
..+.++.+++++.++.+.+ .+...|+++++++|++.+.++. ..+|+++++.+
T Consensus 285 ------~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 285 ------NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred ------ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 2456888999999999987 3667899999999999998654 56899998764
No 85
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=2.8e-29 Score=210.49 Aligned_cols=242 Identities=20% Similarity=0.235 Sum_probs=197.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
.+++|+|+++|++++.+++||+|++ .|+|++|++++.+.++++ |++++
T Consensus 60 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~~ 138 (343)
T cd05285 60 HESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKL-PDNVS 138 (343)
T ss_pred cceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEEC-cCCCC
Confidence 4789999999999999999999985 378999999999999999 99854
Q ss_pred cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEe
Q 024337 53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFN 131 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~ 131 (269)
.. +++.+ .++.+||+++ ..++++++++++|+|+ |++|++++|+|+++|++ |+++++++++.++++ ++|++.+++
T Consensus 139 ~~-~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~ 213 (343)
T cd05285 139 LE-EGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVN 213 (343)
T ss_pred HH-Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEec
Confidence 43 34444 6788999997 7789999999999875 89999999999999997 899988999999998 899999998
Q ss_pred cCChhhH---HHHHHHHCCC-CccEEEeCCCch-hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeee
Q 024337 132 YKEEADL---NAALKRYFPE-GIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRME 206 (269)
Q Consensus 132 ~~~~~~~---~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (269)
+++. ++ .+.+.+.+++ ++|+++||.|+. .+..++++++++|+++.+|.... ....++.....+++.+.
T Consensus 214 ~~~~-~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~ 286 (343)
T cd05285 214 VRTE-DTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP------EVTLPLSAASLREIDIR 286 (343)
T ss_pred cccc-cchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHhhCCcEEE
Confidence 8765 53 7777777766 899999999984 88999999999999999886432 11223345566677766
Q ss_pred eeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCC-CcceEEE
Q 024337 207 GFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQ-NVGKQVV 264 (269)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv 264 (269)
+.... .+.+..+++++.++.+. +.+.+.++++++.++++.+.+++ ..+|+++
T Consensus 287 ~~~~~------~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 287 GVFRY------ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EeccC------hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 65432 25678889999999765 34556789999999999998875 4589987
No 86
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.97 E-value=4.8e-29 Score=209.30 Aligned_cols=246 Identities=22% Similarity=0.183 Sum_probs=202.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCC--ceeecCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAP--YLFKIQHTD 50 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~--~~~~~~p~~ 50 (269)
.|++|+|+++|++++.+++||+|+.. |+|++|+.++.+ .++++ |++
T Consensus 60 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-p~~ 138 (345)
T cd08286 60 HEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKL-PEG 138 (345)
T ss_pred ccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEEC-CCC
Confidence 36899999999999999999999863 789999999988 89999 888
Q ss_pred CCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCcee
Q 024337 51 VPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEA 129 (269)
Q Consensus 51 ~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~ 129 (269)
++.. +++.++..+.+||.++....++.++++++|.|+ |++|.+++|+|+.+| .+|+++++++++.+.++ ++|++.+
T Consensus 139 ~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~ 215 (345)
T cd08286 139 VDEE-AAVMLSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHT 215 (345)
T ss_pred CCHH-HhhhccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCce
Confidence 5433 477888999999998767788999999999876 999999999999999 69999888888888888 8999889
Q ss_pred EecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeee
Q 024337 130 FNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEG 207 (269)
Q Consensus 130 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (269)
+++++. ++...+.+.+++ ++|+++||+|. ..+..+++.++++|+++.+|.... ....++..++.+++++.+
T Consensus 216 v~~~~~-~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08286 216 VNSAKG-DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITITT 288 (345)
T ss_pred eccccc-cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEEEe
Confidence 998876 777777777766 89999999986 678889999999999999986421 123345555778888876
Q ss_pred eeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCC--cceEEEEe
Q 024337 208 FIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQN--VGKQVVAV 266 (269)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~--~gkvvv~~ 266 (269)
.... .+.+..+.++++++.+++. +.+++++++++++++.+..... ..|+++++
T Consensus 289 ~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 289 GLVD------TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ecCc------hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 4321 2467888899999988753 5678999999999999987532 35888864
No 87
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.97 E-value=3.3e-29 Score=207.94 Aligned_cols=252 Identities=28% Similarity=0.412 Sum_probs=210.4
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG 80 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (269)
.|++|+|.++|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. ++++++.++.++|+++.....+.++
T Consensus 63 ~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~l~~~~~~a~~~~~~~~~~~~~ 140 (323)
T cd05276 63 LEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPV-PEGLSLV-EAAALPEVFFTAWQNLFQLGGLKAG 140 (323)
T ss_pred ceeEEEEEeeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccC-CCCCCHH-HHhhchhHHHHHHHHHHHhcCCCCC
Confidence 46789999999999999999999987 79999999999999999 8884433 5778999999999999777889999
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG 159 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 159 (269)
++++|+|++|++|++++++++..|++|+++++++++.+.++ ++|.+.+++.... ++.+.+.+...+ ++|+++||+|+
T Consensus 141 ~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~ 218 (323)
T cd05276 141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGG 218 (323)
T ss_pred CEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCch
Confidence 99999999999999999999999999999999999999997 8998888888776 777777777655 89999999998
Q ss_pred hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHHHCCCee
Q 024337 160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGKLV 234 (269)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~ 234 (269)
..+..++++++++|+++.++..... ........++.+++++.++..... +....+.+.++.+++.++.+.
T Consensus 219 ~~~~~~~~~~~~~g~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (323)
T cd05276 219 DYLARNLRALAPDGRLVLIGLLGGA-----KAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIR 293 (323)
T ss_pred HHHHHHHHhhccCCEEEEEecCCCC-----CCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCcc
Confidence 7788899999999999999864321 112334445578888888765442 122345567788899999988
Q ss_pred eeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
+.....|++++++++++.+.+++..+|+++
T Consensus 294 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 294 PVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred CCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 777778999999999999998887788774
No 88
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.97 E-value=9e-29 Score=207.10 Aligned_cols=249 Identities=27% Similarity=0.380 Sum_probs=210.3
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
.|++|+|+++|++++.+++||+|++. |+|++|+.++.+.++++ |++++.
T Consensus 63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~-p~~~~~ 141 (342)
T cd08266 63 SDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPI-PDNLSF 141 (342)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeC-CCCCCH
Confidence 46889999999999999999999874 67999999999999999 887544
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~ 133 (269)
. +++.++..+.++|+++.+..++.++++++|+|+++++|++++++++..|++|+.+++++++.+.++ .++.+.+++..
T Consensus 142 ~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 219 (342)
T cd08266 142 E-EAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYR 219 (342)
T ss_pred H-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecC
Confidence 3 577888889999999877788999999999999999999999999999999999999999999887 78887778777
Q ss_pred ChhhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337 134 EEADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD 212 (269)
Q Consensus 134 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (269)
+. ++.+.+.+.+.+ ++|++++++|...+..++++++++|+++.++..... .........+.+++++.+.....
T Consensus 220 ~~-~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
T cd08266 220 KE-DFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT 293 (342)
T ss_pred Ch-HHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC
Confidence 65 676777776655 899999999998889999999999999999875421 11233445677888888776543
Q ss_pred cccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 213 HYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
...+..+++++.++.+.+.+...|++++++++++.+.++...+|+++++
T Consensus 294 -----~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 294 -----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred -----HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 4578888999999998887778899999999999999888788999863
No 89
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.97 E-value=7.8e-29 Score=206.21 Aligned_cols=248 Identities=27% Similarity=0.393 Sum_probs=196.7
Q ss_pred ccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337 5 SGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC 75 (269)
Q Consensus 5 ~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~ 75 (269)
|++|+|.. ++++.|++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++..+.++|.++....
T Consensus 63 e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~ 138 (323)
T TIGR02823 63 DAAGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPL-PEGLSLR-EAMALGTAGFTAALSVMALE 138 (323)
T ss_pred eeEEEEEe--cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHhh
Confidence 56788777 567789999999875 79999999999999999 9885443 47788889999998875443
Q ss_pred --cCCCCC-EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccE
Q 024337 76 --SAKHGE-CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDV 152 (269)
Q Consensus 76 --~~~~~~-~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~ 152 (269)
++.+++ +++|+|++|++|++++++|+.+|++++++++++++.+.++ ++|++.+++..+. +. .++...++++|.
T Consensus 139 ~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~d~ 214 (323)
T TIGR02823 139 RNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-SP--PGKPLEKERWAG 214 (323)
T ss_pred hcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-HH--HHHHhcCCCceE
Confidence 388898 9999999999999999999999999999988999889997 8999888876543 32 444444447999
Q ss_pred EEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHCC
Q 024337 153 YFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKEG 231 (269)
Q Consensus 153 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g 231 (269)
++||+|+..+..++++++++|+++.+|.... .....+...++.+++++.+...... .....+.+..+.+++.++
T Consensus 215 vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (323)
T TIGR02823 215 AVDTVGGHTLANVLAQLKYGGAVAACGLAGG-----PDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPR 289 (323)
T ss_pred EEECccHHHHHHHHHHhCCCCEEEEEcccCC-----CCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcC
Confidence 9999999888999999999999999987532 1112233455678888888765432 223344567777788888
Q ss_pred CeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.+.+. ...++++++++|++.+.+++..+|+++++
T Consensus 290 ~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 290 NLESI-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred CCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 87654 45789999999999999998889999863
No 90
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=3.2e-29 Score=204.69 Aligned_cols=252 Identities=23% Similarity=0.314 Sum_probs=205.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec--cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM--TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGE 81 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~ 81 (269)
.+++|.|.++|+++..+++||+|+++ |+|++|+.++.+.++++ |++++.. +++++++.+.++|.++.....+.+++
T Consensus 29 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~ 106 (288)
T smart00829 29 GECAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARLVVPI-PDGLSFE-EAATVPVVFLTAYYALVDLARLRPGE 106 (288)
T ss_pred ceeEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHHeEEC-CCCCCHH-HHHhchHHHHHHHHHHHHHhCCCCCC
Confidence 57889999999999999999999996 79999999999999999 8885443 47788899999999987778899999
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--ceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEADLNAALKRYFPE-GIDVYFENVG 158 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g 158 (269)
+|+|+|++|++|++++++++.+|++|+++++++++.+.++ ++|+ +.++++... ++.+.+.+.+++ ++|.++|++|
T Consensus 107 ~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~ 184 (288)
T smart00829 107 SVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIPDDHIFSSRDL-SFADEILRATGGRGVDVVLNSLA 184 (288)
T ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCChhheeeCCCc-cHHHHHHHHhCCCCcEEEEeCCC
Confidence 9999999999999999999999999999999999999998 8998 678887776 777778777766 8999999999
Q ss_pred chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc---ccchHHHHHHHHHHHHCCCeee
Q 024337 159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEGKLVY 235 (269)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~ 235 (269)
+..+..++++++++|+++.++..... ......... +.+++++.+...... +....+.+..+++++.++.+.+
T Consensus 185 ~~~~~~~~~~l~~~g~~v~~g~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (288)
T smart00829 185 GEFLDASLRCLAPGGRFVEIGKRDIR----DNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP 259 (288)
T ss_pred HHHHHHHHHhccCCcEEEEEcCcCCc----cccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC
Confidence 88888999999999999999864310 011112222 455666655544221 1123455778889999998877
Q ss_pred eeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 236 VEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
...+.+++++++++++.+.+++..+|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 260 LPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred cCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 65577899999999999998877778764
No 91
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.97 E-value=4.3e-29 Score=208.85 Aligned_cols=240 Identities=21% Similarity=0.219 Sum_probs=200.3
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe--------------------------------------ccceeeEEEecCCceee
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG--------------------------------------MTGWEEYSLITAPYLFK 45 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~ 45 (269)
-|++|+|+.+|++++.+++||+|+. .|+|+||+.++.+.+++
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ 138 (337)
T cd05283 59 HEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFK 138 (337)
T ss_pred cceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEE
Confidence 4788999999999999999999962 27899999999999999
Q ss_pred cCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC
Q 024337 46 IQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG 125 (269)
Q Consensus 46 ~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g 125 (269)
+ |++++.. +++.+++.+.+||+++.+ .+++++++++|.| .|++|++++++++.+|++|+++++++++.+.++ ++|
T Consensus 139 l-p~~~~~~-~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g 213 (337)
T cd05283 139 I-PEGLDSA-AAAPLLCAGITVYSPLKR-NGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLG 213 (337)
T ss_pred C-CCCCCHH-HhhhhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcC
Confidence 9 8885544 578899999999999855 4689999999977 599999999999999999999999999999998 899
Q ss_pred CceeEecCChhhHHHHHHHHCCCCccEEEeCCCch-hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337 126 FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (269)
Q Consensus 126 ~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (269)
++.+++.... ++... .++++|+++||+|.. .+..++++++++|+++.+|.... ....++..++.++++
T Consensus 214 ~~~vi~~~~~-~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~ 282 (337)
T cd05283 214 ADEFIATKDP-EAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEE------PLPVPPFPLIFGRKS 282 (337)
T ss_pred CcEEecCcch-hhhhh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCC------CCccCHHHHhcCceE
Confidence 9888877654 33221 234799999999985 58999999999999999987432 113345566778999
Q ss_pred eeeeeecccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
+.++.... .+.++.+++++.++.+++.+ ..++++++++||+.+.+++..||+|++
T Consensus 283 i~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 283 VAGSLIGG-----RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred EEEecccC-----HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 98877653 46788899999999988754 578999999999999999999998874
No 92
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.97 E-value=8.2e-29 Score=209.49 Aligned_cols=251 Identities=19% Similarity=0.204 Sum_probs=196.3
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------------------------------------------------cce
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------------------------------------------------TGW 32 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------g~~ 32 (269)
.|++|+|+++|++++.+++||+|+.+ |+|
T Consensus 66 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 145 (373)
T cd08299 66 HEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTF 145 (373)
T ss_pred ccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcc
Confidence 57899999999999999999999753 689
Q ss_pred eeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEe
Q 024337 33 EEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSA 111 (269)
Q Consensus 33 ~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~ 111 (269)
+||++++.++++++ |++++.. +++.+.+++.+||+++...++++++++|+|+|+ |++|++++++|+.+|+ +|++++
T Consensus 146 ~e~~~v~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~ 222 (373)
T cd08299 146 SEYTVVDEIAVAKI-DAAAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVD 222 (373)
T ss_pred cceEEecccceeeC-CCCCChH-HhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Confidence 99999999999999 9885544 577888899999999877788999999999975 9999999999999999 899999
Q ss_pred CCHHHHHHHHHHcCCceeEecCCh-hhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhh-hcCCEEEEEeccccccCCC
Q 024337 112 GSKDKVDLLKNKFGFDEAFNYKEE-ADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNM-KIRGRIAACGMISQYNLDK 188 (269)
Q Consensus 112 ~s~~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~ 188 (269)
+++++.+.++ ++|++++++..+. .++.+.+.+.+++++|+++||+|. ..+..++..+ +++|+++.+|.....
T Consensus 223 ~~~~~~~~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~---- 297 (373)
T cd08299 223 INKDKFAKAK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS---- 297 (373)
T ss_pred CCHHHHHHHH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----
Confidence 9999999998 8999888887653 026666766665689999999996 6777766655 578999999874320
Q ss_pred CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 189 PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
........ .+.++.++.++....+. ..+.+..+++.+.++.++ +.+.+.|++++++++++.+.+++. .|+++.+
T Consensus 298 ~~~~~~~~-~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 298 QNLSINPM-LLLTGRTWKGAVFGGWK--SKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred ceeecCHH-HHhcCCeEEEEEecCCc--cHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 11112222 34467788887765432 134555666666666443 446678999999999999887765 4777653
No 93
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=8.8e-29 Score=206.86 Aligned_cols=248 Identities=25% Similarity=0.323 Sum_probs=211.5
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------------------------cceeeEEEecCCceeecCCCCCCcchhhhh
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------TGWEEYSLITAPYLFKIQHTDVPLSYYTGI 59 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~ 59 (269)
.+++|+|+++|++++.+++||+|++. |+|++|+.++.+.++++ |++++.. +++.
T Consensus 63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~~-~a~~ 140 (336)
T cd08276 63 SDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRA-PDHLSFE-EAAT 140 (336)
T ss_pred cceeEEEEEeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEEC-CCCCCHH-Hhhh
Confidence 46789999999999999999999874 57999999999999999 8885443 5778
Q ss_pred cCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCC-hhhH
Q 024337 60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKE-EADL 138 (269)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~-~~~~ 138 (269)
++.++.+||+++...++++++++++|+| +|++|++++++++..|++|+++++++++.+.++ ++|.+.+++.+. . ++
T Consensus 141 ~~~~~~~a~~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~ 217 (336)
T cd08276 141 LPCAGLTAWNALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-DW 217 (336)
T ss_pred hhHHHHHHHHHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-CH
Confidence 8899999999997778899999999996 599999999999999999999999999999998 789888888776 5 67
Q ss_pred HHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccch
Q 024337 139 NAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLY 217 (269)
Q Consensus 139 ~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (269)
.+.+.+.+++ ++|+++||++...+..++++++++|+++.+|.... .........++.+++++.+.....
T Consensus 218 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----- 287 (336)
T cd08276 218 GEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSG-----FEAPVLLLPLLTKGATLRGIAVGS----- 287 (336)
T ss_pred HHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCC-----CccCcCHHHHhhcceEEEEEecCc-----
Confidence 7788888776 89999999998888999999999999999987432 111234566778999998887643
Q ss_pred HHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 218 PKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 218 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.+.+..+++++.++.+.+.....+++++++++++.+.+++..+|+++++
T Consensus 288 ~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 5678888999999988776667889999999999999888888998863
No 94
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.97 E-value=7.3e-29 Score=210.76 Aligned_cols=246 Identities=22% Similarity=0.252 Sum_probs=198.4
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCCCCC-
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHTDVP- 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~- 52 (269)
.|++|+|+++|++++.+++||+|++ .|+|++|+.++.+.++++ |++++
T Consensus 93 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~l-P~~~~~ 171 (384)
T cd08265 93 HEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEI-NELREI 171 (384)
T ss_pred cceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEEC-Cccccc
Confidence 3688999999999999999999985 378999999999999999 87531
Q ss_pred ----cchhhhhcCCcchhHHHHHHHh-hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC
Q 024337 53 ----LSYYTGILGMPGMTAYVGFYEV-CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF 126 (269)
Q Consensus 53 ----~~~~~a~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~ 126 (269)
+.+++|+++.++.+||+++... ++++++++|+|+|+ |++|++++++|+.+|+ +|+++++++++.+.++ ++|+
T Consensus 172 ~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~ 249 (384)
T cd08265 172 YSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGA 249 (384)
T ss_pred cccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCC
Confidence 3445778888999999999766 68999999999965 9999999999999999 7999998888888888 8999
Q ss_pred ceeEecCC---hhhHHHHHHHHCCC-CccEEEeCCCc--hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhh
Q 024337 127 DEAFNYKE---EADLNAALKRYFPE-GIDVYFENVGG--KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS 200 (269)
Q Consensus 127 ~~~~~~~~---~~~~~~~i~~~~~~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 200 (269)
++++++++ . ++.+.+.+.+++ ++|+++||.|. ..+..++++++++|+++.+|.... .....+..+..
T Consensus 250 ~~~v~~~~~~~~-~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~ 322 (384)
T cd08265 250 DYVFNPTKMRDC-LSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------TVPLHLEVLQV 322 (384)
T ss_pred CEEEcccccccc-cHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------CCcccHHHHhh
Confidence 88887763 2 566778888876 89999999996 477899999999999999986431 11223344555
Q ss_pred cceeeeeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEEE
Q 024337 201 KRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
+..++.+..... ....+.++++++.++.+.+. +.+.|++++++++++.+.++ ..+|+++
T Consensus 323 ~~~~l~~~~~~~----~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 323 RRAQIVGAQGHS----GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred CceEEEEeeccC----CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 666777664321 23468889999999998763 55678999999999997665 5688876
No 95
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.97 E-value=1.2e-28 Score=205.79 Aligned_cols=243 Identities=27% Similarity=0.335 Sum_probs=199.4
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
.+++|+|+.+|++++.+++||+|+++ |+|++|++++...++++ |++++.
T Consensus 60 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~ 138 (332)
T cd08259 60 HEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKL-PDNVSD 138 (332)
T ss_pred ccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEEC-CCCCCH
Confidence 47889999999999999999999874 68999999999999999 888554
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~ 133 (269)
. +++.+++++.+||+++.. +++.++++++|+|++|++|++++++++..|++|+++++++++.+.++ +++.+.+++..
T Consensus 139 ~-~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 215 (332)
T cd08259 139 E-SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS 215 (332)
T ss_pred H-HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH
Confidence 4 578889999999999966 88999999999999999999999999999999999999999888887 88887777543
Q ss_pred ChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc
Q 024337 134 EEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH 213 (269)
Q Consensus 134 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (269)
++.+.+.+.. ++|++++|+|......++++++++|+++.++..... ...........++.++.++..
T Consensus 216 ---~~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~--- 282 (332)
T cd08259 216 ---KFSEDVKKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPD-----PAPLRPGLLILKEIRIIGSIS--- 282 (332)
T ss_pred ---HHHHHHHhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCC-----CcCCCHHHHHhCCcEEEEecC---
Confidence 3444455433 699999999988889999999999999998764321 111122233346666665532
Q ss_pred ccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 214 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
...+.++.+++++.++.+++.+...+++++++++++.+.+++..+|++++
T Consensus 283 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 283 --ATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred --CCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 23567888999999999988777889999999999999998888898863
No 96
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=6.8e-29 Score=203.06 Aligned_cols=252 Identities=23% Similarity=0.329 Sum_probs=206.6
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec--cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM--TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGE 81 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~ 81 (269)
.+++|+|.++|++++.+++||+|+++ |+|+||+.++.+.++++ |++++.. +++.+++++.++|.++.+...+++++
T Consensus 33 ~e~~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~ 110 (293)
T cd05195 33 LECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARLVVKI-PDSLSFE-EAATLPVAYLTAYYALVDLARLQKGE 110 (293)
T ss_pred eeeeEEEEeecCCccCCCCCCEEEEEecCcccceEEechhheEeC-CCCCCHH-HHhhchHHHHHHHHHHHHHhccCCCC
Confidence 46789999999999999999999997 79999999999999999 8875443 46778899999999997778899999
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--CceeEecCChhhHHHHHHHHCCC-CccEEEeCCC
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG--FDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG 158 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g--~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g 158 (269)
+++|+|++|++|++++++++.+|++|+++++++++.+.++ .++ ++.+++.... ++.+.+.+.+.+ ++|.++||+|
T Consensus 111 ~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~ 188 (293)
T cd05195 111 SVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELGGPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSLS 188 (293)
T ss_pred EEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhCCCcceEeecCch-hHHHHHHHHhCCCCceEEEeCCC
Confidence 9999999999999999999999999999999989999988 777 6778887776 788888887766 8999999999
Q ss_pred chhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc----ccchHHHHHHHHHHHHCCCee
Q 024337 159 GKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----YHLYPKFLEMIIPHIKEGKLV 234 (269)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~ 234 (269)
+..+..++++++++|+++.++...... ..... ...+.+++++........ +....+.+..+.+++.++.++
T Consensus 189 ~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd05195 189 GELLRASWRCLAPFGRFVEIGKRDILS----NSKLG-MRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK 263 (293)
T ss_pred chHHHHHHHhcccCceEEEeecccccc----CCccc-hhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence 988999999999999999998643210 01111 122445566665544332 223345678889999999998
Q ss_pred eeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
+.....+++++++++++.+.+++..+|+++
T Consensus 264 ~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 264 PLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 777778899999999999998887788764
No 97
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=2.2e-28 Score=203.60 Aligned_cols=254 Identities=26% Similarity=0.344 Sum_probs=212.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec--------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM--------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC 75 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~ 75 (269)
.+++|+|..+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. ++++++.++.++|+++....
T Consensus 63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~ 140 (328)
T cd08268 63 YEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKL-PDGLSFV-EAAALWMQYLTAYGALVELA 140 (328)
T ss_pred cceEEEEEeeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhc
Confidence 57889999999999999999999886 78999999999999999 8884433 47889999999999997778
Q ss_pred cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEE
Q 024337 76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYF 154 (269)
Q Consensus 76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi 154 (269)
.+.++++++|+|++|++|++++++++..|++++.+++++++.+.++ ++|.+.+++.+.. ++.+.+.+.+.+ ++|+++
T Consensus 141 ~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi 218 (328)
T cd08268 141 GLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDVVF 218 (328)
T ss_pred CCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHhCCCCceEEE
Confidence 8999999999999999999999999999999999999999999997 8898888887775 777777777665 899999
Q ss_pred eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc---ccchHHHHHHHHHHHHCC
Q 024337 155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMIIPHIKEG 231 (269)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g 231 (269)
+|.|+.....++++++++|+++.+|.... ..........+.+++++.+...... +......++.+.+++.++
T Consensus 219 ~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (328)
T cd08268 219 DPVGGPQFAKLADALAPGGTLVVYGALSG-----EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASG 293 (328)
T ss_pred ECCchHhHHHHHHhhccCCEEEEEEeCCC-----CCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCC
Confidence 99999888899999999999999986432 1112333446788888888765432 233455677777888888
Q ss_pred CeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 232 KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 232 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.+.+.....+++++++++++.+.+++..+|+++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 294 ALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred CCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 88877667889999999999999888888998863
No 98
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.97 E-value=1.2e-28 Score=206.47 Aligned_cols=245 Identities=24% Similarity=0.262 Sum_probs=196.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
.|++|+|.++|++++.+++||+|++. |+|++|++++.+.++++ |+++
T Consensus 63 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-P~~l-- 139 (341)
T PRK05396 63 HEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKI-PDDI-- 139 (341)
T ss_pred eeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEEC-cCCC--
Confidence 46889999999999999999999873 79999999999999999 8884
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
+++.+++..++.++++++.. ...++++|+|.|+ |++|++++|+|+++|+ +|++++.++++.++++ ++|+++++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~ 215 (341)
T PRK05396 140 PDDLAAIFDPFGNAVHTALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNV 215 (341)
T ss_pred CHHHhHhhhHHHHHHHHHHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecC
Confidence 43444455666777666532 3468999999875 9999999999999999 6888888888898888 8999999988
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337 133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (269)
++. ++.+.+.+.+++ ++|++|||.|+ ..+..++++++++|+++.+|.... . .......++.+++++.++..
T Consensus 216 ~~~-~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~-~~~~~~~~~~~~~~l~~~~~ 288 (341)
T PRK05396 216 AKE-DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-----D-MAIDWNKVIFKGLTIKGIYG 288 (341)
T ss_pred ccc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-----C-CcccHHHHhhcceEEEEEEc
Confidence 876 788888887765 89999999986 778999999999999999986432 1 11224566777888777642
Q ss_pred cccccchHHHHHHHHHHHHCC-CeeeeeehccccccHHHHHHHHhcCCCcceEEEEec
Q 024337 211 LDHYHLYPKFLEMIIPHIKEG-KLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAVA 267 (269)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 267 (269)
.. ..+.+..+++++.++ ++.+.+.+.+++++++++++.+.+++ .||++++++
T Consensus 289 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 289 RE----MFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred cC----ccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 21 123456677888888 45555667889999999999998877 799999864
No 99
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=1.6e-28 Score=204.04 Aligned_cols=254 Identities=26% Similarity=0.376 Sum_probs=212.7
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG 80 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (269)
.|++|.|..+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. ++++++.++.++|+++....++.++
T Consensus 63 ~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~ 140 (325)
T TIGR02824 63 LEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPV-PEGLSLV-EAAALPETFFTVWSNLFQRGGLKAG 140 (325)
T ss_pred ceeEEEEEEeCCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeC-CCCCCHH-HHHhhhHHHHHHHHHHHHhcCCCCC
Confidence 46789999999999999999999986 79999999999999999 8885433 4778999999999998778899999
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG 159 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 159 (269)
++++|+|++|++|.+++++++.+|++|+++++++++.+.++ .+|.+.+++.... ++.+.+.+..++ ++|++++|+|+
T Consensus 141 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~ 218 (325)
T TIGR02824 141 ETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGG 218 (325)
T ss_pred CEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCch
Confidence 99999999999999999999999999999999999998887 8998878877765 777778777765 89999999998
Q ss_pred hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-----ccchHHHHHHHHHHHHCCCee
Q 024337 160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-----YHLYPKFLEMIIPHIKEGKLV 234 (269)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~ 234 (269)
..+..++++++++|+++.++..... . ...++..++.+++++.+...... +....+.+..+++++.++.+.
T Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 293 (325)
T TIGR02824 219 SYLNRNIKALALDGRIVQIGFQGGR----K-AELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVR 293 (325)
T ss_pred HHHHHHHHhhccCcEEEEEecCCCC----c-CCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCccc
Confidence 8888999999999999999874321 1 12344555688999988876442 112345567788899999888
Q ss_pred eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 235 YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 235 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
+.....+++++++++++.+.++...+|+++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 294 PVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred CccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 76777889999999999999888888998863
No 100
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.97 E-value=1.8e-28 Score=207.84 Aligned_cols=250 Identities=20% Similarity=0.185 Sum_probs=199.1
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe----------------------------------------ccceeeEEEecCC--
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG----------------------------------------MTGWEEYSLITAP-- 41 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~-- 41 (269)
.|++|+|+++|++++.+++||+|+. .|+|+||+.++.+
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~ 138 (375)
T cd08282 59 HEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADF 138 (375)
T ss_pred cccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccC
Confidence 4788999999999999999999975 1679999999976
Q ss_pred ceeecCCCCCCcch--hhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 024337 42 YLFKIQHTDVPLSY--YTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVD 118 (269)
Q Consensus 42 ~~~~~~p~~~~~~~--~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~ 118 (269)
.++++ |++++... .++++++++.++|+++ ..++++++++|+|.|+ |++|++++|+|+++|+ +|+++++++++.+
T Consensus 139 ~~~~l-P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~ 215 (375)
T cd08282 139 NLLKL-PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLD 215 (375)
T ss_pred cEEEC-CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 89999 88854431 2577888999999999 7788999999999765 9999999999999998 8999988999999
Q ss_pred HHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch------------hHhhhHhhhhcCCEEEEEeccccccC
Q 024337 119 LLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK------------TLDAVLPNMKIRGRIAACGMISQYNL 186 (269)
Q Consensus 119 ~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~ 186 (269)
.++ ++|+ ..+++++. ++.+.+.+.+++++|+++||+|+. .+..++++++++|+++.+|.......
T Consensus 216 ~~~-~~g~-~~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~ 292 (375)
T cd08282 216 LAE-SIGA-IPIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDP 292 (375)
T ss_pred HHH-HcCC-eEeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCccc
Confidence 998 8998 45677665 677777776656799999999975 38899999999999988876432111
Q ss_pred CC-------CCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCC
Q 024337 187 DK-------PEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQ 257 (269)
Q Consensus 187 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~ 257 (269)
.. .....+...++.++..+.+... ..++.++.+++++.++.+++. +.+.+++++++++++.+.+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~ 367 (375)
T cd08282 293 GAGDAAAKQGELSFDFGLLWAKGLSFGTGQA-----PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL 367 (375)
T ss_pred ccccccccCccccccHHHHHhcCcEEEEecC-----CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC
Confidence 00 0112234455566666555432 235678889999999999863 678899999999999999888
Q ss_pred CcceEEEE
Q 024337 258 NVGKQVVA 265 (269)
Q Consensus 258 ~~gkvvv~ 265 (269)
.+|+|+.
T Consensus 368 -~~kvvv~ 374 (375)
T cd08282 368 -ETKVVIK 374 (375)
T ss_pred -ceEEEeC
Confidence 8899875
No 101
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.97 E-value=1.5e-28 Score=205.80 Aligned_cols=245 Identities=21% Similarity=0.255 Sum_probs=198.1
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe---------------------------c---cceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG---------------------------M---TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~---------------------------~---g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
.+++|+|.++|++++.+++||+|++ + |+|++|+.++.+.++++ |++++
T Consensus 61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~- 138 (340)
T TIGR00692 61 HEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKN-PKSIP- 138 (340)
T ss_pred cceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEEC-cCCCC-
Confidence 4688999999999999999999986 2 78999999999999999 88844
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
+..++++.++.++++++ ...+.++++++|.|+ |++|.+++|+++.+|++ |+++.+++++.+.++ ++|++.++++
T Consensus 139 -~~~a~~~~~~~~a~~~~--~~~~~~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~ 213 (340)
T TIGR00692 139 -PEYATIQEPLGNAVHTV--LAGPISGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNP 213 (340)
T ss_pred -hHhhhhcchHHHHHHHH--HccCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEcc
Confidence 35667888889999887 345789999999765 99999999999999996 888877888888888 8999888888
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337 133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (269)
... ++.+.+.+.+++ ++|+++||+|+ ..+...+++++++|+++.+|..... ........++.+++++.+...
T Consensus 214 ~~~-~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 287 (340)
T TIGR00692 214 FKE-DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-----VTIDFTNKVIFKGLTIYGITG 287 (340)
T ss_pred ccc-CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-----cccchhhhhhhcceEEEEEec
Confidence 776 788888887765 89999999886 6788999999999999999864211 111112245666777765442
Q ss_pred cccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 211 LDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
....+.+..+++++.++.++ +.+...+++++++++++.+.+++. ||+++++
T Consensus 288 ----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 288 ----RHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred ----CCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 12245678899999999886 446678899999999999988875 9999864
No 102
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.97 E-value=2.1e-28 Score=204.69 Aligned_cols=249 Identities=22% Similarity=0.247 Sum_probs=203.3
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA 77 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~ 77 (269)
.+++|+|..+|++++.+++||+|+.+ |+|++|+.++.++++++ |++++.. +++.++..+.++|+++...+++
T Consensus 65 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~ 142 (336)
T cd08252 65 WDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHK-PKSLSFA-EAAALPLTSLTAWEALFDRLGI 142 (336)
T ss_pred cceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeC-CCCCCHH-HhhhhhhHHHHHHHHHHHhcCC
Confidence 46789999999999999999999985 78999999999999999 8875444 4778899999999998777888
Q ss_pred CC-----CCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337 78 KH-----GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID 151 (269)
Q Consensus 78 ~~-----~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d 151 (269)
.+ +++|+|+|++|++|++++++++.+| ++|+++++++++.+.++ ++|++++++... ++.+.+....++++|
T Consensus 143 ~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d 219 (336)
T cd08252 143 SEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVD 219 (336)
T ss_pred CCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCC
Confidence 87 9999999999999999999999999 89999999999999998 899988888764 555666544334899
Q ss_pred EEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-------ccchHHHHHH
Q 024337 152 VYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-------YHLYPKFLEM 223 (269)
Q Consensus 152 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 223 (269)
+++||+|. ..+..++++++++|+++.+|... .......++.+++++.+..+... +....+.+++
T Consensus 220 ~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (336)
T cd08252 220 YIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNE 291 (336)
T ss_pred EEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHH
Confidence 99999995 78999999999999999997631 11223334467788777654321 1123456888
Q ss_pred HHHHHHCCCeeeeee---hccccccHHHHHHHHhcCCCcceEEEE
Q 024337 224 IIPHIKEGKLVYVED---MAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 224 ~~~~~~~g~~~~~~~---~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
+++++.++.+.+... ..+++++++++++.+.++...+|++++
T Consensus 292 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 292 VADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 999999999987533 347999999999999998888898863
No 103
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.97 E-value=1.5e-28 Score=206.71 Aligned_cols=242 Identities=21% Similarity=0.229 Sum_probs=195.6
Q ss_pred cccceEEEEeccCCC--CCCCCCeEEe---------------------------c-----cceeeEEEecCC-ceeecCC
Q 024337 4 ISGYGVAKVLDSENP--EFSKGDLVWG---------------------------M-----TGWEEYSLITAP-YLFKIQH 48 (269)
Q Consensus 4 i~~~G~v~~vg~~v~--~~~~Gd~V~~---------------------------~-----g~~~~~~~v~~~-~~~~~~p 48 (269)
.|++|+|+++|++++ .+++||+|++ + |+|+||+.++.+ .++++ |
T Consensus 68 ~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~l-P 146 (350)
T cd08256 68 HEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKV-P 146 (350)
T ss_pred cceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEEC-C
Confidence 468999999999999 8999999986 3 799999999988 57899 8
Q ss_pred CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD 127 (269)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~ 127 (269)
++++.. .++.+ .++.++|+++ ..++++++++|+|.| +|++|++++++|+.+|+ .++++++++++.+.++ ++|++
T Consensus 147 ~~~~~~-~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~ 221 (350)
T cd08256 147 DDIPPE-DAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGAD 221 (350)
T ss_pred CCCCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCCc
Confidence 884433 35555 8899999998 778999999999955 59999999999999998 4677788888888888 89998
Q ss_pred eeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHH-hhccee
Q 024337 128 EAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYL-VSKRLR 204 (269)
Q Consensus 128 ~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~ 204 (269)
.++++.+. ++.+.+.+.+++ ++|+++||+|. ..+..++++++++|+++.+|.... .....+..+ ..++++
T Consensus 222 ~v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~ 294 (350)
T cd08256 222 VVLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD------PVTVDWSIIGDRKELD 294 (350)
T ss_pred EEecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC------CCccChhHhhcccccE
Confidence 88888776 788888887776 89999999995 678899999999999999975321 111222222 245666
Q ss_pred eeeeeecccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEEE
Q 024337 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
+.++... ...+.++++++.++.+++. +.+.++++++++|++.+.+++..+|+++
T Consensus 295 i~~~~~~------~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 295 VLGSHLG------PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEEeccC------chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 6665543 2357788999999999873 5678999999999999999888888874
No 104
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.97 E-value=2.9e-28 Score=204.09 Aligned_cols=240 Identities=21% Similarity=0.264 Sum_probs=192.7
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-----------------------------------ccceeeEEEecCCceeecCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-----------------------------------MTGWEEYSLITAPYLFKIQH 48 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~~p 48 (269)
.|++|+|+++|++++.+++||+|++ .|+|+||++++.+.++++ |
T Consensus 59 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~i-P 137 (339)
T cd08232 59 HEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPL-P 137 (339)
T ss_pred ccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEEC-c
Confidence 4678999999999999999999986 278999999999999999 9
Q ss_pred CCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc
Q 024337 49 TDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD 127 (269)
Q Consensus 49 ~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~ 127 (269)
+++ +++.|+++.++.++|+++.....+ ++++|||.|+ |++|++++|+|+++|+ +|+++++++++.+.++ ++|++
T Consensus 138 ~~~--~~~~aa~~~~~~~a~~~l~~~~~~-~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~ 212 (339)
T cd08232 138 DGL--SLRRAALAEPLAVALHAVNRAGDL-AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGAD 212 (339)
T ss_pred CCC--CHHHhhhcchHHHHHHHHHhcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCC
Confidence 884 444445578888999998665556 9999999775 9999999999999999 8999998888888888 89998
Q ss_pred eeEecCChhhHHHHHHHHC-C-CCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337 128 EAFNYKEEADLNAALKRYF-P-EGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (269)
Q Consensus 128 ~~~~~~~~~~~~~~i~~~~-~-~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (269)
++++++.. ++ .+.. . +++|+++||.|+ ..+...+++|+++|+++.++.... ........++.++++
T Consensus 213 ~vi~~~~~-~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~ 281 (339)
T cd08232 213 ETVNLARD-PL----AAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG------PVPLPLNALVAKELD 281 (339)
T ss_pred EEEcCCch-hh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccCcHHHHhhcceE
Confidence 88888764 42 2222 2 369999999996 678899999999999999876321 112233444667777
Q ss_pred eeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
+.+... ..+.++.+++++.++.+++ .+.+++++++++++++.+.+++..||+|+++
T Consensus 282 ~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 282 LRGSFR------FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred EEEEec------CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 766542 2456788899999998864 3567889999999999999888889999864
No 105
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.97 E-value=1.3e-29 Score=224.65 Aligned_cols=242 Identities=21% Similarity=0.274 Sum_probs=207.1
Q ss_pred CCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHH
Q 024337 20 FSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLV 96 (269)
Q Consensus 20 ~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~ 96 (269)
-+-|.||+++ -++++.+.++.+++|.+ |.+-.+. ++++.|+.+.|+|++|..+++.++|++|||++|+||+|+++
T Consensus 1492 d~~GrRvM~mvpAksLATt~l~~rd~lWev-P~~WTle-eAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAA 1569 (2376)
T KOG1202|consen 1492 DASGRRVMGMVPAKSLATTVLASRDFLWEV-PSKWTLE-EASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAA 1569 (2376)
T ss_pred cCCCcEEEEeeehhhhhhhhhcchhhhhhC-Ccccchh-hcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHH
Confidence 5678899998 48999999999999999 9885555 68899999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---ceeEecCChhhHHHHHHHHCCC-CccEEEeCCCchhHhhhHhhhhcC
Q 024337 97 GQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---DEAFNYKEEADLNAALKRYFPE-GIDVYFENVGGKTLDAVLPNMKIR 172 (269)
Q Consensus 97 i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~---~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~ 172 (269)
|.+|..+|++|+.+..|.++++++++.|.- ...-|+++. +|.+.+.+.|.| |+|+|++....+.++.+++||..+
T Consensus 1570 IaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~ 1648 (2376)
T KOG1202|consen 1570 IAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALH 1648 (2376)
T ss_pred HHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhc
Confidence 999999999999999999999999865543 456788887 999999999988 999999999999999999999999
Q ss_pred CEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHC----CCeeeeeehccccccHHH
Q 024337 173 GRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKE----GKLVYVEDMAEGLESAPA 248 (269)
Q Consensus 173 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~ 248 (269)
|||..+|... ...-.......+.+|.+++|.-+-.+.+-..+.++++..++++ |.++|..+.+|+-+++++
T Consensus 1649 GRFLEIGKfD-----LSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~ 1723 (2376)
T KOG1202|consen 1649 GRFLEIGKFD-----LSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVED 1723 (2376)
T ss_pred Ceeeeeccee-----cccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHH
Confidence 9999998743 1222222345678999999988766644445566666666655 688899999999999999
Q ss_pred HHHHHhcCCCcceEEEEecCC
Q 024337 249 ALIGLFSGQNVGKQVVAVAPE 269 (269)
Q Consensus 249 a~~~~~~~~~~gkvvv~~~~~ 269 (269)
||+.|.+|+..||+|+++.+|
T Consensus 1724 AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1724 AFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred HHHHHhccCccceEEEEEccc
Confidence 999999999999999987653
No 106
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.97 E-value=3.1e-28 Score=204.04 Aligned_cols=244 Identities=23% Similarity=0.266 Sum_probs=196.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
.+++|+|+.+|++++.+++||+|+++ |+|++|++++.+.++++ |+++
T Consensus 63 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~l-P~~~-- 139 (341)
T cd05281 63 HEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKN-DKDI-- 139 (341)
T ss_pred cceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEEC-cCCC--
Confidence 46789999999999999999999873 78999999999999999 8884
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
+.++++++.++.++++++. ....++++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|+++++++
T Consensus 140 ~~~~a~~~~~~~~a~~~~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~ 215 (341)
T cd05281 140 PPEIASIQEPLGNAVHTVL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINP 215 (341)
T ss_pred CHHHhhhhhHHHHHHHHHH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCc
Confidence 4356678888889998874 45678999999875 9999999999999999 7999988888888888 8999888887
Q ss_pred CChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337 133 KEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (269)
+.. ++. .+.+.+++ ++|++|||+|+ .....++++|+++|+++.+|.... ............++..+.+...
T Consensus 216 ~~~-~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 288 (341)
T cd05281 216 REE-DVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-----PVDIDLNNLVIFKGLTVQGITG 288 (341)
T ss_pred ccc-cHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-----CcccccchhhhccceEEEEEec
Confidence 765 677 77777766 99999999986 678899999999999999876432 1100111235556666665542
Q ss_pred cccccchHHHHHHHHHHHHCCCee--eeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 211 LDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
. ...+.+..+++++.++.+. +.+...+++++++++++.+.+++ .||+++++
T Consensus 289 ~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 289 R----KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred C----CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 1 2234577889999999876 34556789999999999999988 89999864
No 107
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=4.6e-28 Score=203.39 Aligned_cols=246 Identities=19% Similarity=0.220 Sum_probs=200.0
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-c-----------------------------cceeeEEEecCC--ceeecCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-M-----------------------------TGWEEYSLITAP--YLFKIQHTDV 51 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-~-----------------------------g~~~~~~~v~~~--~~~~~~p~~~ 51 (269)
.|++|+|+++|+++..+++||+|++ + |+|+||+.++.+ .++++ |+++
T Consensus 59 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-P~~l 137 (345)
T cd08287 59 HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKV-PGSP 137 (345)
T ss_pred cceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEEC-CCCC
Confidence 4788999999999999999999986 1 789999999975 99999 9885
Q ss_pred Ccchh----hhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCC
Q 024337 52 PLSYY----TGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGF 126 (269)
Q Consensus 52 ~~~~~----~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~ 126 (269)
+.... .+++...+.+||+++ ..++++++++++|.| +|++|++++|+|+++|++ ++++++++++.+.++ ++|+
T Consensus 138 ~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga 214 (345)
T cd08287 138 SDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGA 214 (345)
T ss_pred ChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCC
Confidence 54111 124557789999998 467899999999976 599999999999999995 888888888888888 8999
Q ss_pred ceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhccee
Q 024337 127 DEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLR 204 (269)
Q Consensus 127 ~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (269)
++++++... ++.+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.++.... ....+....+.++++
T Consensus 215 ~~v~~~~~~-~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~ 287 (345)
T cd08287 215 TDIVAERGE-EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------GVELDVRELFFRNVG 287 (345)
T ss_pred ceEecCCcc-cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------CCccCHHHHHhcceE
Confidence 999999876 778888887766 89999999986 788999999999999999876431 122334456788888
Q ss_pred eeeeeecccccchHHHHHHHHHHHHCCCeee--eeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 205 MEGFIVLDHYHLYPKFLEMIIPHIKEGKLVY--VEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
+.+... ...+.++.+++++.++.+++ .+...+++++++++++.+.+++.. |++|++
T Consensus 288 ~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~~ 345 (345)
T cd08287 288 LAGGPA-----PVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLRP 345 (345)
T ss_pred EEEecC-----CcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeCC
Confidence 877432 23567899999999999886 355778999999999998877654 988853
No 108
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.97 E-value=2.9e-28 Score=202.94 Aligned_cols=235 Identities=28% Similarity=0.333 Sum_probs=190.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
-|++|+|+++|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.
T Consensus 60 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~ 138 (325)
T cd08264 60 AEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKI-PDSISD 138 (325)
T ss_pred cceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeC-CCCCCH
Confidence 36889999999999999999999863 78999999999999999 988554
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecC
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYK 133 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~ 133 (269)
. +++.+++++.+||+++.. ++++++++++|+|++|++|++++++|+.+|++|+++++ .+.++ ++|++++++.+
T Consensus 139 ~-~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~~ 211 (325)
T cd08264 139 E-LAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDYD 211 (325)
T ss_pred H-HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecch
Confidence 4 578889999999999954 88999999999999999999999999999999998873 36666 89998888765
Q ss_pred ChhhHHHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc
Q 024337 134 EEADLNAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH 213 (269)
Q Consensus 134 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (269)
+ ..+.+++.+ +++|+++||+|...+..++++++++|+++.+|.... .....++..++.++.++.+.....
T Consensus 212 ~---~~~~l~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~- 281 (325)
T cd08264 212 E---VEEKVKEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTG-----GEVKLDLSDLYSKQISIIGSTGGT- 281 (325)
T ss_pred H---HHHHHHHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCC-----CCCccCHHHHhhcCcEEEEccCCC-
Confidence 3 345566555 679999999999889999999999999999986321 112344556666777777764432
Q ss_pred ccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceE
Q 024337 214 YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQ 262 (269)
Q Consensus 214 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 262 (269)
++.++.+++++.+.. ..+.+.|++++++++++.+.+++..+|+
T Consensus 282 ----~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 282 ----RKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred ----HHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 466788888886544 4456789999999999999987776665
No 109
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=4.9e-28 Score=203.70 Aligned_cols=258 Identities=21% Similarity=0.200 Sum_probs=192.2
Q ss_pred cccceEEEEeccCCC-CCCCCCeEEec--------cceeeEEEecCC----ceeecCCCCCCcchhhhhcCCcchhHHHH
Q 024337 4 ISGYGVAKVLDSENP-EFSKGDLVWGM--------TGWEEYSLITAP----YLFKIQHTDVPLSYYTGILGMPGMTAYVG 70 (269)
Q Consensus 4 i~~~G~v~~vg~~v~-~~~~Gd~V~~~--------g~~~~~~~v~~~----~~~~~~p~~~~~~~~~a~l~~~~~~a~~~ 70 (269)
.|++|+|.++|++++ .+++||+|+++ |+|++|+.++.. .++++ |++++.. +++.++..+.+||++
T Consensus 64 ~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~ 141 (352)
T cd08247 64 RDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRK-PENISLE-EAAAWPLVLGTAYQI 141 (352)
T ss_pred ceeEEEEEEeCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEEC-CCCCCHH-HHHHhHHHHHHHHHH
Confidence 467899999999998 89999999975 789999999998 78999 8885544 577889999999999
Q ss_pred HHHhh-cCCCCCEEEEecCcchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhh---HHHHH-H
Q 024337 71 FYEVC-SAKHGECVFISAASGAVGQLVGQFAKLL-GC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD---LNAAL-K 143 (269)
Q Consensus 71 l~~~~-~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~---~~~~i-~ 143 (269)
+...+ +++++++++|+|+++++|++++++|+.+ |. .++++. ++++.++++ ++|++.++++++. + +...+ +
T Consensus 142 l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~~ 218 (352)
T cd08247 142 LEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFIDYDAH-SGVKLLKPVLE 218 (352)
T ss_pred HHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEEecCCC-cccchHHHHHH
Confidence 97766 7999999999999999999999999987 55 677776 566667777 8999888887765 4 44444 4
Q ss_pred HHCCC-CccEEEeCCCc-hhHhhhHhhhh---cCCEEEEEeccccccCCCCC-----CccchHHHhhcceeeeeeeeccc
Q 024337 144 RYFPE-GIDVYFENVGG-KTLDAVLPNMK---IRGRIAACGMISQYNLDKPE-----GVHNLMYLVSKRLRMEGFIVLDH 213 (269)
Q Consensus 144 ~~~~~-~~d~vid~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 213 (269)
..+++ ++|++|||+|+ .....++++++ ++|+++.++........... ........+.+++++........
T Consensus 219 ~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
T cd08247 219 NVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFF 298 (352)
T ss_pred hhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEE
Confidence 44424 89999999998 68888999999 99999987532110000000 00000111222322222211110
Q ss_pred -ccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 214 -YHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 214 -~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.....+.+..+++++.++.+++.+.+.+++++++++++.+.+++..||+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 299 LLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred EecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 00114678889999999999887778899999999999999988889999863
No 110
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.5e-27 Score=198.51 Aligned_cols=248 Identities=27% Similarity=0.376 Sum_probs=205.1
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec--------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM--------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC 75 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~ 75 (269)
.+++|+|..+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. .++.++..+.+||+++.+..
T Consensus 63 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~ 140 (326)
T cd08272 63 CDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALK-PANLSMR-EAAALPLVGITAWEGLVDRA 140 (326)
T ss_pred cceeEEEEEeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccC-CCCCCHH-HHHHhHHHHHHHHHHHHHhc
Confidence 46789999999999999999999985 68999999999999999 8885443 47788889999999987888
Q ss_pred cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEE
Q 024337 76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYF 154 (269)
Q Consensus 76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vi 154 (269)
+++++++++|+|+++++|++++++++.+|++|+.++++ ++.+.++ ++|++.+++... .+.+.+.+.+++ ++|.++
T Consensus 141 ~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v~ 216 (326)
T cd08272 141 AVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVEYVAEHTGGRGFDVVF 216 (326)
T ss_pred CCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHHHHHHhcCCCCCcEEE
Confidence 99999999999999999999999999999999999987 8888887 899988887655 366667777766 899999
Q ss_pred eCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc--c----ccchHHHHHHHHHHH
Q 024337 155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD--H----YHLYPKFLEMIIPHI 228 (269)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~ 228 (269)
||.|+.....++++++++|+++.++... .........+++++.+..... . +....+.+..+++++
T Consensus 217 ~~~~~~~~~~~~~~l~~~g~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (326)
T cd08272 217 DTVGGETLDASFEAVALYGRVVSILGGA---------THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLV 287 (326)
T ss_pred ECCChHHHHHHHHHhccCCEEEEEecCC---------ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHH
Confidence 9999988888999999999999987632 111122336677777665432 1 223456788899999
Q ss_pred HCCCeeeeee-hccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 229 KEGKLVYVED-MAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 229 ~~g~~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.++.+.+.+. ..+++++++++++.+.+++..+|+++++
T Consensus 288 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 288 ERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 9999887655 7899999999999998888788999864
No 111
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.96 E-value=1.3e-27 Score=198.39 Aligned_cols=253 Identities=26% Similarity=0.353 Sum_probs=210.9
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG 80 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (269)
.+++|.|..+|++++.+++||+|+++ |++++|+.++.+.++++ |++++.. +++++..++.+||+++....++.++
T Consensus 63 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~ 140 (323)
T cd08241 63 SEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPL-PDGLSFE-EAAALPVTYGTAYHALVRRARLQPG 140 (323)
T ss_pred ceeEEEEEEeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHHceeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCC
Confidence 36789999999999999999999986 68999999999999999 8885443 4677899999999999777889999
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCCc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVGG 159 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 159 (269)
++++|+|++|++|++++++++..|++|+.+++++++.+.++ ++|++.+++.... ++.+.+.+.+++ ++|.++||+|+
T Consensus 141 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g~ 218 (323)
T cd08241 141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGG 218 (323)
T ss_pred CEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECccH
Confidence 99999999999999999999999999999999999999998 8998888887775 777888887766 89999999999
Q ss_pred hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccc----cchHHHHHHHHHHHHCCCeee
Q 024337 160 KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY----HLYPKFLEMIIPHIKEGKLVY 235 (269)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~ 235 (269)
.....++++++++|+++.++.... ..........+.+++++.+.....+. ....+.+..+++++.++.+.+
T Consensus 219 ~~~~~~~~~~~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (323)
T cd08241 219 DVFEASLRSLAWGGRLLVIGFASG-----EIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRP 293 (323)
T ss_pred HHHHHHHHhhccCCEEEEEccCCC-----CcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccc
Confidence 888899999999999999886321 11112233456688888887654431 123466788899999998887
Q ss_pred eeehccccccHHHHHHHHhcCCCcceEEEE
Q 024337 236 VEDMAEGLESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 236 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
.....|+++++.++++.+.++...+|++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 294 HVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 777788999999999999888878888863
No 112
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=6.7e-28 Score=201.21 Aligned_cols=251 Identities=25% Similarity=0.288 Sum_probs=195.5
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG 80 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (269)
.+++|+|+.+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++.++.++|+++.+.+++.++
T Consensus 63 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~g 140 (331)
T cd08273 63 YDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPV-PEGVDAA-EAVCLVLNYVTAYQMLHRAAKVLTG 140 (331)
T ss_pred cceEEEEEEeCCCCccCCCCCEEEEeCCCcceeeEEEechHHeEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCC
Confidence 46789999999999999999999986 89999999999999999 8885544 5778999999999999777889999
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK 160 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 160 (269)
++++|+|++|++|++++++++..|++|+.++. +++.+.++ ++|+.. ++.... ++... +..++++|.++||+|+.
T Consensus 141 ~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~~-~~~~~~-~~~~~--~~~~~~~d~vl~~~~~~ 214 (331)
T cd08273 141 QRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGATP-IDYRTK-DWLPA--MLTPGGVDVVFDGVGGE 214 (331)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCeE-EcCCCc-chhhh--hccCCCceEEEECCchH
Confidence 99999999999999999999999999999996 88888887 888653 454443 44433 33344899999999997
Q ss_pred hHhhhHhhhhcCCEEEEEeccccccCCCCCCccch------------HHHhhcceeeeeeeeccc--ccchHHHHHHHHH
Q 024337 161 TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNL------------MYLVSKRLRMEGFIVLDH--YHLYPKFLEMIIP 226 (269)
Q Consensus 161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 226 (269)
....++++++++|+++.+|........ .....+ ...+.+++++.+...... +....+.+..+++
T Consensus 215 ~~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 292 (331)
T cd08273 215 SYEESYAALAPGGTLVCYGGNSSLLQG--RRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLD 292 (331)
T ss_pred HHHHHHHHhcCCCEEEEEccCCCCCCc--cccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHH
Confidence 789999999999999999875421100 000000 111223333333322110 2234577889999
Q ss_pred HHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 227 HIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 227 ~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
++.++.+.+.+...+++++++++++.+.+++..||+|+
T Consensus 293 ~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 293 LLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 99999998777778999999999999998888888886
No 113
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.96 E-value=1.9e-27 Score=198.81 Aligned_cols=242 Identities=28% Similarity=0.364 Sum_probs=193.9
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe------------------------------ccceeeEEEecCCceeecCCCCCCc
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG------------------------------MTGWEEYSLITAPYLFKIQHTDVPL 53 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~~p~~~~~ 53 (269)
.+++|+|+.+|++++.+++||+|++ .|+|++|+.++.+.++++ |++++.
T Consensus 58 ~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~~~ 136 (334)
T cd08234 58 HEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKI-PDNLSF 136 (334)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEEC-cCCCCH
Confidence 4688999999999999999999986 278999999999999999 988554
Q ss_pred chhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 54 SYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 54 ~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
. +++ +...+.++++++ ..++++++++|+|+|+ |++|.+++++|+.+|++ |+++++++++.+.++ ++|++.++++
T Consensus 137 ~-~aa-~~~~~~~a~~~l-~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~ 211 (334)
T cd08234 137 E-EAA-LAEPLSCAVHGL-DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDP 211 (334)
T ss_pred H-HHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecC
Confidence 3 344 447788999998 7789999999999975 99999999999999997 888998999999997 8999888887
Q ss_pred CChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337 133 KEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (269)
.+. ++... +...++++|+++||+|. ..+..++++++++|+++.+|.... ..........++.+++++.+...
T Consensus 212 ~~~-~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~- 284 (334)
T cd08234 212 SRE-DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAP----DARVSISPFEIFQKELTIIGSFI- 284 (334)
T ss_pred CCC-CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCC----CCCcccCHHHHHhCCcEEEEecc-
Confidence 765 55444 33333489999999985 788899999999999999987432 01112233344557777776543
Q ss_pred ccccchHHHHHHHHHHHHCCCeeee--eehccccccHHHHHHHHhcCCCcceEEE
Q 024337 212 DHYHLYPKFLEMIIPHIKEGKLVYV--EDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
..+.++.+++++.++.+.+. +...+++++++++++.+.+ +..+|+++
T Consensus 285 -----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 285 -----NPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred -----CHHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 24568889999999988742 5567899999999999998 77789886
No 114
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.96 E-value=2.1e-27 Score=200.63 Aligned_cols=243 Identities=20% Similarity=0.235 Sum_probs=191.9
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
.|++|+|+++|++++.|++||+|++ .|+|+||++++.+.++++ |++
T Consensus 79 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~-P~~-- 155 (364)
T PLN02702 79 HECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL-PEN-- 155 (364)
T ss_pred cceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEEC-CCC--
Confidence 5789999999999999999999986 378999999999999999 888
Q ss_pred cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCceeEe
Q 024337 53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFGFDEAFN 131 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g~~~~~~ 131 (269)
++++.+++..++.++|+++ ...++.++++++|+|+ |++|++++++++.+|++ |+++++++++.+.++ ++|++.+++
T Consensus 156 l~~~~aa~~~~~~~a~~~~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~ 232 (364)
T PLN02702 156 VSLEEGAMCEPLSVGVHAC-RRANIGPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVL 232 (364)
T ss_pred CCHHHHhhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEe
Confidence 4444444444556688887 6788999999999975 99999999999999994 777887888888888 899988766
Q ss_pred cC--ChhhHHHHHHHH---CCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceee
Q 024337 132 YK--EEADLNAALKRY---FPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRM 205 (269)
Q Consensus 132 ~~--~~~~~~~~i~~~---~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (269)
+. +. ++.+.+.+. +++++|++|||+|+ ..+..++++++++|+++.+|.... ...........+++++
T Consensus 233 ~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i 305 (364)
T PLN02702 233 VSTNIE-DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN------EMTVPLTPAAAREVDV 305 (364)
T ss_pred cCcccc-cHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC------CCcccHHHHHhCccEE
Confidence 43 23 565665543 33489999999995 789999999999999999986421 1123445567788888
Q ss_pred eeeeecccccchHHHHHHHHHHHHCCCee--eeeehcccc--ccHHHHHHHHhcCCCcceEEEE
Q 024337 206 EGFIVLDHYHLYPKFLEMIIPHIKEGKLV--YVEDMAEGL--ESAPAALIGLFSGQNVGKQVVA 265 (269)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~ 265 (269)
.+++.. ...++.++++++++.+. +.+.+.|++ +++++|++.+.+++..+|+++.
T Consensus 306 ~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 306 VGVFRY------RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred EEeccC------hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 876542 24678889999999875 335566554 7999999999988888899985
No 115
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=1.1e-27 Score=195.10 Aligned_cols=241 Identities=24% Similarity=0.258 Sum_probs=189.2
Q ss_pred cccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEE
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECV 83 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~v 83 (269)
.|++|+|.++|++++.+++||+|++++.|++|+.++.+.++++ |++++.. +++.+ +++.+||+++. .+++++++++
T Consensus 26 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~~~~i-p~~l~~~-~aa~~-~~~~ta~~~~~-~~~~~~g~~v 101 (277)
T cd08255 26 YSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANLLVPL-PDGLPPE-RAALT-ALAATALNGVR-DAEPRLGERV 101 (277)
T ss_pred cceeEEEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHHeeEC-cCCCCHH-HhHHH-HHHHHHHHHHH-hcCCCCCCEE
Confidence 5788999999999999999999999999999999999999999 8885443 45556 78999999984 6889999999
Q ss_pred EEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcC-CceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-h
Q 024337 84 FISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKNKFG-FDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG-K 160 (269)
Q Consensus 84 lI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~~~g-~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~ 160 (269)
+|+|+ |++|++++++|+++|++ |+++++++++.+.++ ++| .+.+++.... ...+.++|++|||++. .
T Consensus 102 lI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~--------~~~~~~~d~vl~~~~~~~ 171 (277)
T cd08255 102 AVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTAD--------EIGGRGADVVIEASGSPS 171 (277)
T ss_pred EEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccchh--------hhcCCCCCEEEEccCChH
Confidence 99975 99999999999999998 999999999999888 888 4444433221 1122389999999885 7
Q ss_pred hHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccc-------cchHHHHHHHHHHHHCCCe
Q 024337 161 TLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHY-------HLYPKFLEMIIPHIKEGKL 233 (269)
Q Consensus 161 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~ 233 (269)
.+..++++++++|+++.+|.... . .......+..+.+++.+....... ....+.++++++++.++.+
T Consensus 172 ~~~~~~~~l~~~g~~~~~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 245 (277)
T cd08255 172 ALETALRLLRDRGRVVLVGWYGL-----K-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRL 245 (277)
T ss_pred HHHHHHHHhcCCcEEEEEeccCC-----C-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCc
Confidence 88899999999999999987432 1 111122344456677666554321 1224678899999999998
Q ss_pred eeeeehccccccHHHHHHHHhcC-CCcceEEE
Q 024337 234 VYVEDMAEGLESAPAALIGLFSG-QNVGKQVV 264 (269)
Q Consensus 234 ~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv 264 (269)
++.+.+.+++++++++++.+.++ ....|+++
T Consensus 246 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 246 EALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 87777889999999999999877 33456653
No 116
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.96 E-value=4.5e-27 Score=195.71 Aligned_cols=249 Identities=22% Similarity=0.298 Sum_probs=196.7
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHH-
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYE- 73 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~- 73 (269)
-|++|+|+. ++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++..+++++.++..
T Consensus 63 ~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~~~~~~~~~~ta~~~~~~~ 138 (324)
T cd08288 63 IDLAGTVVE--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPL-PEGLSAR-QAMAIGTAGFTAMLCVMAL 138 (324)
T ss_pred cceEEEEEe--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeC-CCCCCHH-HHhhhhhHHHHHHHHHHHH
Confidence 356788777 777889999999974 78999999999999999 9885443 477888888999877641
Q ss_pred -hhcCC-CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337 74 -VCSAK-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID 151 (269)
Q Consensus 74 -~~~~~-~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d 151 (269)
..+.. ++++++|+|++|++|++++|+|+.+|++|++++.++++.+.++ ++|+++++++++. . ..+...+++++|
T Consensus 139 ~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~--~~~~~~~~~~~~ 214 (324)
T cd08288 139 EDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL-S--EPGRPLQKERWA 214 (324)
T ss_pred hhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh-h--HhhhhhccCccc
Confidence 23445 6789999999999999999999999999999999999999997 9999888887653 2 245555555799
Q ss_pred EEEeCCCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc-ccchHHHHHHHHHHHHC
Q 024337 152 VYFENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH-YHLYPKFLEMIIPHIKE 230 (269)
Q Consensus 152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 230 (269)
.++|++|+..+..++..++.+|+++.+|.... ......+..++.+++++.+...... .....+.++.+.+++.+
T Consensus 215 ~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (324)
T cd08288 215 GAVDTVGGHTLANVLAQTRYGGAVAACGLAGG-----ADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDP 289 (324)
T ss_pred EEEECCcHHHHHHHHHHhcCCCEEEEEEecCC-----CCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhc
Confidence 99999998777788888999999999987421 1111233445578899888764332 22345677888888889
Q ss_pred CCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 231 GKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 231 g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
+.+.+ +...+++++++++++.+.+++..+|+++++
T Consensus 290 ~~~~~-i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 290 ALLEA-LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred CCccc-cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 88876 457889999999999999999889999864
No 117
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.96 E-value=4.3e-27 Score=196.23 Aligned_cols=234 Identities=21% Similarity=0.178 Sum_probs=190.4
Q ss_pred cccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
.|++|+|+.+|++++.+++||+|+. .|+|++|+.++.+.++++ |++++
T Consensus 64 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~ 142 (329)
T cd08298 64 HEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPI-PEDYD 142 (329)
T ss_pred ccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEEC-CCCCC
Confidence 4789999999999999999999975 378999999999999999 98854
Q ss_pred cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
.. +++++++++.+||+++ ..++++++++++|+|+ |++|+++++++++.|++|+++++++++.+.++ ++|++.+++.
T Consensus 143 ~~-~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~ 218 (329)
T cd08298 143 DE-EAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDS 218 (329)
T ss_pred HH-HhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEecc
Confidence 44 5789999999999999 7899999999999975 99999999999999999999999999999997 8999877766
Q ss_pred CChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337 133 KEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (269)
.. . .+.++|+++++.+. ..+..++++++++|+++.++.... ......... +.++..+.+....
T Consensus 219 ~~--~--------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~-~~~~~~i~~~~~~ 282 (329)
T cd08298 219 DD--L--------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYEL-LWGEKTIRSVANL 282 (329)
T ss_pred Cc--c--------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchhh-hhCceEEEEecCC
Confidence 53 1 12379999998764 788999999999999998874221 111122222 3455555554322
Q ss_pred ccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
..+.++.+++++.++.+++. .+.|+++++++|++.+.+++..||+++
T Consensus 283 -----~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 283 -----TRQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred -----CHHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 25668889999999988874 467899999999999999988898874
No 118
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.96 E-value=3.9e-27 Score=196.58 Aligned_cols=240 Identities=25% Similarity=0.288 Sum_probs=195.6
Q ss_pred cccceEEEEeccCCCCCCCCCeEE----------------------------ec---cceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVW----------------------------GM---TGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~----------------------------~~---g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
.|++|+|..+|++++.+++||+|+ ++ |+|++|+.++.+.++++ |++++
T Consensus 59 ~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~ 137 (330)
T cd08245 59 HEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLL-PDGLP 137 (330)
T ss_pred ccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEEC-CCCCC
Confidence 478999999999999999999997 32 78999999999999999 88854
Q ss_pred cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec
Q 024337 53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~ 132 (269)
.. +++.+++.+.+||+++.. .+++++++|+|+|+ |++|++++++|+.+|++|+++++++++.+.++ ++|++.+++.
T Consensus 138 ~~-~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~ 213 (330)
T cd08245 138 LA-QAAPLLCAGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDS 213 (330)
T ss_pred HH-HhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEecc
Confidence 44 577889999999999955 78999999999976 77999999999999999999999999999997 8998888876
Q ss_pred CChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeec
Q 024337 133 KEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVL 211 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (269)
... +.... ..+++|+++||++. .....++++++++|+++.++.... .........++.++.++.++...
T Consensus 214 ~~~-~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 283 (330)
T cd08245 214 GAE-LDEQA----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPES-----PPFSPDIFPLIMKRQSIAGSTHG 283 (330)
T ss_pred CCc-chHHh----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCC-----CccccchHHHHhCCCEEEEeccC
Confidence 653 33222 22479999999885 788899999999999999976432 11112234466777777776553
Q ss_pred ccccchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 212 DHYHLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
. .+.++.+++++.++.+.+ ....+++++++++++.+.+++..+|+++
T Consensus 284 ~-----~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 284 G-----RADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred C-----HHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 2 467888899999998876 3467899999999999999988888875
No 119
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=9e-27 Score=193.80 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=202.4
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA 77 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~ 77 (269)
.+++|.|+.+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. .++.+.+.+.++++++.+.+++
T Consensus 62 ~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~i-p~~~~~~-~~a~~~~~~~~a~~~~~~~~~~ 139 (325)
T cd08271 62 VDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPL-PDSLSFE-EAAALPCAGLTAYQALFKKLRI 139 (325)
T ss_pred cceEEEEEEeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEEC-CCCCCHH-HHHhhhhhHHHHHHHHHHhcCC
Confidence 46789999999999999999999985 68999999999999999 8885444 5778999999999999888889
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFEN 156 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~ 156 (269)
.++++++|+|+++++|++++++++..|++|+++. ++++.+.+. .+|++.+++.... ++...+.+..++ ++|.+++|
T Consensus 140 ~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~ 216 (325)
T cd08271 140 EAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDT 216 (325)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEEC
Confidence 9999999999999999999999999999999888 777888887 8999888887775 677778877766 89999999
Q ss_pred CCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeeccc----c----cchHHHHHHHHHHH
Q 024337 157 VGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDH----Y----HLYPKFLEMIIPHI 228 (269)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~ 228 (269)
+++.....++++++++|+++.++.... . . ....+.+++.+....+... + ....+.+..+++++
T Consensus 217 ~~~~~~~~~~~~l~~~G~~v~~~~~~~-----~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
T cd08271 217 VGGETAAALAPTLAFNGHLVCIQGRPD-----A-S---PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELL 287 (325)
T ss_pred CCcHhHHHHHHhhccCCEEEEEcCCCC-----C-c---chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHH
Confidence 998777789999999999999865321 0 0 1122334444443332211 1 23445678888999
Q ss_pred HCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 229 KEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.++.+.+.....++++++.++++.+.+++..+|+++++
T Consensus 288 ~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 288 AAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 99999876667889999999999999888888998863
No 120
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.96 E-value=1.6e-27 Score=200.43 Aligned_cols=253 Identities=26% Similarity=0.353 Sum_probs=192.1
Q ss_pred ccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCC
Q 024337 5 SGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAK 78 (269)
Q Consensus 5 ~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~ 78 (269)
|++|+|..+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. .++.+++.+.++|+++.+.+.+.
T Consensus 80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~ 157 (350)
T cd08248 80 DCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKK-PKNLSHE-EAASLPYAGLTAWSALVNVGGLN 157 (350)
T ss_pred eeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecC-CCCCCHH-HHhhchhHHHHHHHHHHHhccCC
Confidence 6789999999999999999999884 89999999999999999 9885443 57789999999999997777775
Q ss_pred C----CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337 79 H----GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYF 154 (269)
Q Consensus 79 ~----~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 154 (269)
+ +++++|+|++|++|++++++++.+|++|+++.++ ++.+.++ ++|.+.+++..+. ++.+.+... +++|+++
T Consensus 158 ~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~--~~vd~vi 232 (350)
T cd08248 158 PKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE-DFEEELTER--GKFDVIL 232 (350)
T ss_pred CccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-hHHHHHHhc--CCCCEEE
Confidence 4 9999999999999999999999999999998855 5777777 8999888887765 555555432 3799999
Q ss_pred eCCCchhHhhhHhhhhcCCEEEEEeccccccCCC-CC--Ccc-chHHHhhccee-ee-eeee-cccccchHHHHHHHHHH
Q 024337 155 ENVGGKTLDAVLPNMKIRGRIAACGMISQYNLDK-PE--GVH-NLMYLVSKRLR-ME-GFIV-LDHYHLYPKFLEMIIPH 227 (269)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~--~~~-~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~ 227 (269)
||+|+.....++++++++|+++.++......... .. ... ....+...... +. .... +.......+.+..++++
T Consensus 233 ~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (350)
T cd08248 233 DTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKL 312 (350)
T ss_pred ECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHH
Confidence 9999888899999999999999997643110000 00 000 00011111110 00 0000 00011236678999999
Q ss_pred HHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 228 IKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
+.++.+.+.+...+++++++++++.+.+++..+|+++
T Consensus 313 ~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 349 (350)
T cd08248 313 VEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVI 349 (350)
T ss_pred HhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence 9999998777788999999999999998887788876
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.1e-26 Score=194.19 Aligned_cols=258 Identities=25% Similarity=0.389 Sum_probs=205.8
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec---cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM---TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHG 80 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~ 80 (269)
.+++|+|..+|++++++++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++.++.++|+++....+++++
T Consensus 62 ~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~ 139 (337)
T cd08275 62 FECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPL-PDGMSFE-EAAAFPVNYLTAYYALFELGNLRPG 139 (337)
T ss_pred ceeEEEEEEECCCCcCCCCCCEEEEecCCCeeeeEEEecHHHeEEC-CCCCCHH-HHhhhhHHHHHHHHHHHHhhCCCCC
Confidence 47889999999999999999999997 78999999999999999 8875443 4678889999999999888899999
Q ss_pred CEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG 159 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 159 (269)
++|+|+|++|++|++++++|+.. +..++... .+++.+.++ .+|++.+++.... ++.+.+.+.+++++|+++||+|+
T Consensus 140 ~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g~ 216 (337)
T cd08275 140 QSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGG 216 (337)
T ss_pred CEEEEEcCcchHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCcH
Confidence 99999999999999999999998 44433332 455778887 8999888888776 77777877765589999999999
Q ss_pred hhHhhhHhhhhcCCEEEEEeccccccCCC-C----------CCccchHHHhhcceeeeeeeeccc---ccchHHHHHHHH
Q 024337 160 KTLDAVLPNMKIRGRIAACGMISQYNLDK-P----------EGVHNLMYLVSKRLRMEGFIVLDH---YHLYPKFLEMII 225 (269)
Q Consensus 160 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 225 (269)
.....++++++++|+++.+|.....+... . .....+..++.+++++.++..... .......+..++
T Consensus 217 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (337)
T cd08275 217 EDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLL 296 (337)
T ss_pred HHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHH
Confidence 88889999999999999998643210000 0 011222456788888888765432 112234578888
Q ss_pred HHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 226 PHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
+++.++.+.+.....|++++++++++.+.+++..+|+++++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 297 KLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 99999998877777899999999999999888889999864
No 122
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.96 E-value=7.8e-27 Score=193.86 Aligned_cols=231 Identities=19% Similarity=0.178 Sum_probs=182.5
Q ss_pred CcccceEEEEeccCCCCCCCCCeEEe-------------------------------ccceeeEEEecCCceeecCCCCC
Q 024337 3 PISGYGVAKVLDSENPEFSKGDLVWG-------------------------------MTGWEEYSLITAPYLFKIQHTDV 51 (269)
Q Consensus 3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~~p~~~ 51 (269)
..|++|+|+++|++ +++||+|.+ .|+|++|+.++.++++++ |+++
T Consensus 55 G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~ 130 (319)
T cd08242 55 GHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVV-PDLV 130 (319)
T ss_pred CceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEEC-cCCC
Confidence 35789999999988 679999862 268999999999999999 8884
Q ss_pred CcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEe
Q 024337 52 PLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN 131 (269)
Q Consensus 52 ~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~ 131 (269)
+ .+.+++..+..++|.++ +..+++++++|+|+| +|++|++++|+|+.+|++|++++.++++.+.++ ++|++.+++
T Consensus 131 ~--~~~aa~~~~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~ 205 (319)
T cd08242 131 P--DEQAVFAEPLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLP 205 (319)
T ss_pred C--HHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeC
Confidence 4 33333335555666655 678899999999997 599999999999999999999999999999999 799987776
Q ss_pred cCChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeee
Q 024337 132 YKEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIV 210 (269)
Q Consensus 132 ~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (269)
++. . ..++++|+++||+|+ ..+..++++++++|+++..+.... ....+...++.++.++.+...
T Consensus 206 ~~~--~-------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~i~~~~~ 270 (319)
T cd08242 206 DEA--E-------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVNEITLVGSRC 270 (319)
T ss_pred ccc--c-------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheecceEEEEEec
Confidence 543 1 122389999999987 678899999999999998655321 122345566778888877654
Q ss_pred cccccchHHHHHHHHHHHHCCCe--eeeeehccccccHHHHHHHHhcCCCcceEEEEe
Q 024337 211 LDHYHLYPKFLEMIIPHIKEGKL--VYVEDMAEGLESAPAALIGLFSGQNVGKQVVAV 266 (269)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 266 (269)
.. ++.+++++.++.+ .+.+.+.|++++++++++.+.++. .+|+++++
T Consensus 271 ~~--------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 271 GP--------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred cc--------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 32 6778899999998 455778899999999999998776 47998863
No 123
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.3e-26 Score=192.27 Aligned_cols=245 Identities=29% Similarity=0.330 Sum_probs=188.7
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA 77 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~ 77 (269)
.|++|.|.++|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. .++.+++++.+||+++....++
T Consensus 64 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~ 141 (319)
T cd08267 64 MDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKK-PEGVSFE-EAAALPVAGLTALQALRDAGKV 141 (319)
T ss_pred ceeeEEEEEeCCCCCCCCCCCEEEEeccCCCCceeeEEEEechhheEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCC
Confidence 36789999999999999999999875 78999999999999999 8885444 5788999999999999777779
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFEN 156 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~ 156 (269)
+++++++|+|++|++|++++++++.+|++|++++++ ++.+.++ ++|++++++.... ++. ...+.+ ++|+++||
T Consensus 142 ~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~~ 215 (319)
T cd08267 142 KPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFDA 215 (319)
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEEC
Confidence 999999999999999999999999999999999855 8888887 8999888877654 443 333444 89999999
Q ss_pred CCc--hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccc--hHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCC
Q 024337 157 VGG--KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN--LMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGK 232 (269)
Q Consensus 157 ~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (269)
+|+ ......+..++++|+++.+|...... ..... ..........+...... + ..+.+..+++++.++.
T Consensus 216 ~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~~ 287 (319)
T cd08267 216 VGNSPFSLYRASLALKPGGRYVSVGGGPSGL----LLVLLLLPLTLGGGGRRLKFFLAK--P--NAEDLEQLAELVEEGK 287 (319)
T ss_pred CCchHHHHHHhhhccCCCCEEEEeccccccc----cccccccchhhccccceEEEEEec--C--CHHHHHHHHHHHHCCC
Confidence 995 33344444599999999998743210 00000 00111111122221111 1 1677899999999999
Q ss_pred eeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 233 LVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 233 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
+.+.+...+++++++++++.+.+++..+|+++
T Consensus 288 ~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 288 LKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred eeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 98888788999999999999998877788774
No 124
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.95 E-value=2.9e-26 Score=189.19 Aligned_cols=211 Identities=25% Similarity=0.330 Sum_probs=175.5
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec-------------------------------cceeeEEEecCCceeecCCCCCC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM-------------------------------TGWEEYSLITAPYLFKIQHTDVP 52 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~~p~~~~ 52 (269)
.+++|+|+.+|++++.+++||+|+++ |+|++|++++.+.++++ |+++
T Consensus 61 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~- 138 (306)
T cd08258 61 HEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHEL-PENL- 138 (306)
T ss_pred cceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEEC-cCCC-
Confidence 46789999999999999999999874 78999999999999999 9884
Q ss_pred cchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHHcCCceeE
Q 024337 53 LSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSA--GSKDKVDLLKNKFGFDEAF 130 (269)
Q Consensus 53 ~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~--~s~~~~~~~~~~~g~~~~~ 130 (269)
+++.++++.++.++|+++...++++++++|+|.| +|++|.+++++|+.+|++|++++ .++++.+.++ ++|++.+
T Consensus 139 -~~~~aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~- 214 (306)
T cd08258 139 -SLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV- 214 (306)
T ss_pred -CHHHHHhhchHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-
Confidence 4444458888999999998888999999999976 59999999999999999988774 3455777777 8999877
Q ss_pred ecCChhhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeee
Q 024337 131 NYKEEADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGF 208 (269)
Q Consensus 131 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (269)
++... ++.+.+.+..++ ++|+++||.|+ ..+...++.|+++|+++.+|.... .....++..++.+++++.|+
T Consensus 215 ~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~i~g~ 288 (306)
T cd08258 215 NGGEE-DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----LAASIDVERIIQKELSVIGS 288 (306)
T ss_pred CCCcC-CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----CCcccCHHHHhhcCcEEEEE
Confidence 77776 788888877765 89999999985 788899999999999999988542 12334556777899999998
Q ss_pred eecccccchHHHHHHHHHHHHCC
Q 024337 209 IVLDHYHLYPKFLEMIIPHIKEG 231 (269)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~g 231 (269)
.... .++++++++++++|
T Consensus 289 ~~~~-----~~~~~~~~~~~~~~ 306 (306)
T cd08258 289 RSST-----PASWETALRLLASG 306 (306)
T ss_pred ecCc-----hHhHHHHHHHHhcC
Confidence 8755 56688888888765
No 125
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.95 E-value=3.7e-26 Score=188.59 Aligned_cols=238 Identities=28% Similarity=0.386 Sum_probs=195.7
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec------cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM------TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA 77 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~ 77 (269)
.+++|.|+.+|++++.+++||+|+++ |+|++|+.++...++++ |++++.. .++.++..+.++|+++.....+
T Consensus 65 ~e~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~ 142 (309)
T cd05289 65 HDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALK-PANLSFE-EAAALPLAGLTAWQALFELGGL 142 (309)
T ss_pred cceeEEEEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccC-CCCCCHH-HHHhhhHHHHHHHHHHHhhcCC
Confidence 36789999999999999999999985 69999999999999999 8885544 4678888999999999777779
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFEN 156 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~ 156 (269)
.++++++|+|++|++|++++++++..|++|+++++++ +.+.++ .+|.+.+++.... ++.+ .+.+ ++|.++||
T Consensus 143 ~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~----~~~~~~~d~v~~~ 215 (309)
T cd05289 143 KAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER----AAAPGGVDAVLDT 215 (309)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh----ccCCCCceEEEEC
Confidence 9999999999999999999999999999999999777 888887 8998778877664 4433 2333 79999999
Q ss_pred CCchhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHHCCCeeee
Q 024337 157 VGGKTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYV 236 (269)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 236 (269)
+|+.....++++++++|+++.++.... . .. ..+.+++++....... . .+.+..+++++.++.+.+.
T Consensus 216 ~~~~~~~~~~~~l~~~g~~v~~g~~~~-----~--~~---~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~ 281 (309)
T cd05289 216 VGGETLARSLALVKPGGRLVSIAGPPP-----A--EQ---AAKRRGVRAGFVFVEP---D-GEQLAELAELVEAGKLRPV 281 (309)
T ss_pred CchHHHHHHHHHHhcCcEEEEEcCCCc-----c--hh---hhhhccceEEEEEecc---c-HHHHHHHHHHHHCCCEEEe
Confidence 999888999999999999999976321 0 00 3345566665554322 1 5678889999999999887
Q ss_pred eehccccccHHHHHHHHhcCCCcceEEE
Q 024337 237 EDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 237 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
+.+.+++++++++++.+.+++..+|+++
T Consensus 282 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 282 VDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred eccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 7788999999999999998877788764
No 126
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.95 E-value=2e-25 Score=180.97 Aligned_cols=198 Identities=31% Similarity=0.424 Sum_probs=166.4
Q ss_pred cccceEEEEeccCCCCCCCCCeEEec--------------------------cceeeEEEecCCceeecCCCCCCcchhh
Q 024337 4 ISGYGVAKVLDSENPEFSKGDLVWGM--------------------------TGWEEYSLITAPYLFKIQHTDVPLSYYT 57 (269)
Q Consensus 4 i~~~G~v~~vg~~v~~~~~Gd~V~~~--------------------------g~~~~~~~v~~~~~~~~~p~~~~~~~~~ 57 (269)
.+++|+|.++|++++.|++||+|+++ |+|++|+.++.+.++++ |++++.. ++
T Consensus 35 ~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a 112 (271)
T cd05188 35 HEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPL-PDGLSLE-EA 112 (271)
T ss_pred cccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCEeccccCCcceEEEEechHHeEEC-CCCCCHH-Hh
Confidence 47889999999999999999999873 68999999999999999 8885443 57
Q ss_pred hhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhh
Q 024337 58 GILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD 137 (269)
Q Consensus 58 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~ 137 (269)
+.++.++.+||+++.....+.++++|+|+|+++ +|++++++++..|.+|+++++++++.+.++ ++|.+.+++.... +
T Consensus 113 ~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~ 189 (271)
T cd05188 113 ALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-D 189 (271)
T ss_pred hHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC-C
Confidence 788899999999997777779999999999966 999999999999999999999999999998 8898888887765 6
Q ss_pred HHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecc
Q 024337 138 LNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLD 212 (269)
Q Consensus 138 ~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (269)
..+.+. ...+ ++|+++||+|. .....++++++++|+++.++..... .........+.+++++.++....
T Consensus 190 ~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 260 (271)
T cd05188 190 LEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGG-----PPLDDLRRLLFKELTIIGSTGGT 260 (271)
T ss_pred HHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCC-----CCcccHHHHHhcceEEEEeecCC
Confidence 666665 4444 89999999998 8889999999999999999875431 11122446678899998887654
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.82 E-value=5.5e-19 Score=127.38 Aligned_cols=127 Identities=27% Similarity=0.451 Sum_probs=113.6
Q ss_pred hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCC-CccEEEeCCC-chhHhhhHhh
Q 024337 91 AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPE-GIDVYFENVG-GKTLDAVLPN 168 (269)
Q Consensus 91 ~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g-~~~~~~~~~~ 168 (269)
++|++++|+|+++|++|+++++++++.++++ ++|+++++++++. ++.+++++.+++ ++|++|||+| ...++.++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~ 78 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL 78 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence 6899999999999999999999999999999 9999999999997 899999999988 9999999999 5999999999
Q ss_pred hhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHHHHHHHHHH
Q 024337 169 MKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFLEMIIPHIK 229 (269)
Q Consensus 169 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (269)
++++|+++.+|... ......+...++.+++++.++...+ .+.++++++++.
T Consensus 79 l~~~G~~v~vg~~~-----~~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la 129 (130)
T PF00107_consen 79 LRPGGRIVVVGVYG-----GDPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA 129 (130)
T ss_dssp EEEEEEEEEESSTS-----TSEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred hccCCEEEEEEccC-----CCCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence 99999999999864 2345567889999999999998866 566777777665
No 128
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.65 E-value=6e-16 Score=111.02 Aligned_cols=122 Identities=30% Similarity=0.351 Sum_probs=81.2
Q ss_pred cCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC--chh-HhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhh
Q 024337 124 FGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG--GKT-LDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS 200 (269)
Q Consensus 124 ~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g--~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 200 (269)
||+++++||+.. ++ ..+++||+||||+| +.. +..++++| ++|+++.++.. ........
T Consensus 1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~-----------~~~~~~~~ 61 (127)
T PF13602_consen 1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGD-----------LPSFARRL 61 (127)
T ss_dssp CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SH-----------HHHHHHHH
T ss_pred CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCc-----------ccchhhhh
Confidence 689999999975 65 22348999999999 644 48888999 99999988630 00111112
Q ss_pred cceeeeeeeecccc--cchHHHHHHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCCCcceEEE
Q 024337 201 KRLRMEGFIVLDHY--HLYPKFLEMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQNVGKQVV 264 (269)
Q Consensus 201 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv 264 (269)
+...+......... ...++.++.+.+++.+|+++|.+.++|||+++++|++.+.+++..||+||
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 22222222222111 12466799999999999999999999999999999999999999999996
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.51 E-value=6.8e-13 Score=111.75 Aligned_cols=177 Identities=12% Similarity=0.074 Sum_probs=130.8
Q ss_pred hhHHHHHHHhhc-CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHH
Q 024337 65 MTAYVGFYEVCS-AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALK 143 (269)
Q Consensus 65 ~~a~~~l~~~~~-~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~ 143 (269)
...|.++.+..+ ..+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.+.+.++ .+|+..+ + ..+.+
T Consensus 186 ~s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~~-~------~~e~v- 255 (413)
T cd00401 186 ESLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEVM-T------MEEAV- 255 (413)
T ss_pred hhhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEEc-c------HHHHH-
Confidence 444555544433 368999999998 99999999999999999999999999999998 8888432 1 11222
Q ss_pred HHCCCCccEEEeCCCc-hhHhhh-HhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHHH
Q 024337 144 RYFPEGIDVYFENVGG-KTLDAV-LPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKFL 221 (269)
Q Consensus 144 ~~~~~~~d~vid~~g~-~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (269)
.++|++|+|+|. ..+... ++.++++|+++.+|.. ....+...+..+++++.++..... ...+
T Consensus 256 ----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~ 319 (413)
T cd00401 256 ----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYEL 319 (413)
T ss_pred ----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEc
Confidence 248999999997 556665 9999999999999852 234666777888888887765321 1123
Q ss_pred H--HHHHHHHCCCe---eeeeehc-----cccc-cHHHHHHHHhcCCC-cceEEEEec
Q 024337 222 E--MIIPHIKEGKL---VYVEDMA-----EGLE-SAPAALIGLFSGQN-VGKQVVAVA 267 (269)
Q Consensus 222 ~--~~~~~~~~g~~---~~~~~~~-----~~~~-~~~~a~~~~~~~~~-~gkvvv~~~ 267 (269)
+ ..+.++.+|.+ .+.+.+. ++|+ |+.+++..+.++.. ..|+++.++
T Consensus 320 ~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 320 PDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred CCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 4 67899999988 3445555 7798 99999999987653 357776654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.41 E-value=9.2e-12 Score=107.57 Aligned_cols=149 Identities=13% Similarity=0.084 Sum_probs=107.0
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCCh------------hhHHHHHH
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEE------------ADLNAALK 143 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~------------~~~~~~i~ 143 (269)
..++++|+|+|+ |.+|+++++.|+.+|++|++++.++++.+.++ ++|++. .+|..+. .++.+..+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 457999999999 99999999999999999999999999999999 999984 3554321 02222222
Q ss_pred HH-CC--CCccEEEeCCCch------h-HhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhh-cceeeeeeeecc
Q 024337 144 RY-FP--EGIDVYFENVGGK------T-LDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVS-KRLRMEGFIVLD 212 (269)
Q Consensus 144 ~~-~~--~~~d~vid~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 212 (269)
+. .+ .++|++|+|+|.. . .+.+++.++++|+++.++...+.+.. .......++. +++++.|....
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e---~t~~~~~v~~~~gVti~Gv~n~- 315 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCE---LTVPGEVVVTDNGVTIIGYTDL- 315 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcc---cccCccceEeECCEEEEEeCCC-
Confidence 22 22 2699999999952 4 48999999999999999874332111 1122234554 78888887632
Q ss_pred cccchHHHHHHHHHHHHCCCeee
Q 024337 213 HYHLYPKFLEMIIPHIKEGKLVY 235 (269)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~g~~~~ 235 (269)
+ .++.....+++.++.+..
T Consensus 316 -P---~~~p~~As~lla~~~i~l 334 (509)
T PRK09424 316 -P---SRLPTQSSQLYGTNLVNL 334 (509)
T ss_pred -c---hhHHHHHHHHHHhCCccH
Confidence 1 344556788888887754
No 131
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.73 E-value=1.3e-07 Score=76.73 Aligned_cols=169 Identities=16% Similarity=0.200 Sum_probs=101.1
Q ss_pred hcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHH--CC
Q 024337 75 CSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRY--FP 147 (269)
Q Consensus 75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~--~~ 147 (269)
+.++++++||.+|+ |+ |..+.++++..|. +|++++.+++..+.+++. ++...+ ..... + +.+. .+
T Consensus 73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d----~~~l~~~~ 144 (272)
T PRK11873 73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-E----IEALPVAD 144 (272)
T ss_pred ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-c----hhhCCCCC
Confidence 56889999999997 55 8888888888775 799999999998888732 233221 11111 2 2222 23
Q ss_pred CCccEEEeCCC-----c--hhHhhhHhhhhcCCEEEEEeccccccCCCCCCccchHHHhhcceeeeeeeecccccchHHH
Q 024337 148 EGIDVYFENVG-----G--KTLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLVSKRLRMEGFIVLDHYHLYPKF 220 (269)
Q Consensus 148 ~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (269)
+.||+|+.... . ..+..+.+.|+++|+++..+.... .. .. ..+.+...+.+...... ..
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~----~~---~~--~~~~~~~~~~~~~~~~~--~~--- 210 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLR----GE---LP--EEIRNDAELYAGCVAGA--LQ--- 210 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeecc----CC---CC--HHHHHhHHHHhccccCC--CC---
Confidence 47999985531 1 568999999999999998765431 11 11 11122222221111111 11
Q ss_pred HHHHHHHHHC-C--CeeeeeehccccccHHHHHHHH--hcCCCcceEEEE
Q 024337 221 LEMIIPHIKE-G--KLVYVEDMAEGLESAPAALIGL--FSGQNVGKQVVA 265 (269)
Q Consensus 221 ~~~~~~~~~~-g--~~~~~~~~~~~~~~~~~a~~~~--~~~~~~gkvvv~ 265 (269)
..++.+++.+ | .+.......++++++.++++.+ .++...++.++.
T Consensus 211 ~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 260 (272)
T PRK11873 211 EEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIVS 260 (272)
T ss_pred HHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEEE
Confidence 2234444544 3 3334444567899999999988 555555555543
No 132
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.68 E-value=1.2e-06 Score=71.01 Aligned_cols=171 Identities=16% Similarity=0.151 Sum_probs=105.3
Q ss_pred CcccceEEEEeccCCCCCCCCCeEEeccceeeEEEecCCcee----------------------ecCCCCC-Ccchh-hh
Q 024337 3 PISGYGVAKVLDSENPEFSKGDLVWGMTGWEEYSLITAPYLF----------------------KIQHTDV-PLSYY-TG 58 (269)
Q Consensus 3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~----------------------~~~p~~~-~~~~~-~a 58 (269)
.||.=|...++-|+++.+.+|.||+|+=..++++++.+..+- ++.++.. +-+.+ .-
T Consensus 32 ~vPvWGfA~VveS~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~~~e~~~ 111 (314)
T PF11017_consen 32 IVPVWGFATVVESRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDPEREDWQ 111 (314)
T ss_pred ccccceEEEEEeeCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCcchhHHH
Confidence 366667778889999999999999998333333333222211 0101100 00111 22
Q ss_pred hcCCcchhHHHHHHHhhc---CCCCCEEEEecCcchHHHHHHHHHH-Hc-CCEEEEEeCCHHHHHHHHHHcCC-ceeEec
Q 024337 59 ILGMPGMTAYVGFYEVCS---AKHGECVFISAASGAVGQLVGQFAK-LL-GCYVVGSAGSKDKVDLLKNKFGF-DEAFNY 132 (269)
Q Consensus 59 ~l~~~~~~a~~~l~~~~~---~~~~~~vlI~ga~g~vG~~~i~~a~-~~-G~~V~~~~~s~~~~~~~~~~~g~-~~~~~~ 132 (269)
+|..++...-.+|.+... .-..+.|+|..|++=+++..+.+++ .. +.+++.++ |..+..+.+ .+|. +.++.|
T Consensus 112 ~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve-~lg~Yd~V~~Y 189 (314)
T PF11017_consen 112 MLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVE-SLGCYDEVLTY 189 (314)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhh-ccCCceEEeeh
Confidence 334443333334433321 2345789999999999999999998 33 45999999 778888998 9997 678877
Q ss_pred CChhhHHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCC-EEEEEeccc
Q 024337 133 KEEADLNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRG-RIAACGMIS 182 (269)
Q Consensus 133 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G-~~v~~g~~~ 182 (269)
++ +.++.....-+++|+.|. ......-+.++..= ..+.+|...
T Consensus 190 d~-------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 190 DD-------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred hh-------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 54 333333456799999998 45555555555532 456666544
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.68 E-value=2.5e-07 Score=80.21 Aligned_cols=104 Identities=19% Similarity=0.247 Sum_probs=79.4
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCCh------------hhHHHHHHH
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEE------------ADLNAALKR 144 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~------------~~~~~~i~~ 144 (269)
.++++++|.|+ |.+|+++++.++.+|++|+++++++++.+.++ ++|.+. .++..+. .++.+...+
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 46789999998 99999999999999999999999999999998 899865 2332110 023332222
Q ss_pred HCC---CCccEEEeCC---Cc-h---hHhhhHhhhhcCCEEEEEecccc
Q 024337 145 YFP---EGIDVYFENV---GG-K---TLDAVLPNMKIRGRIAACGMISQ 183 (269)
Q Consensus 145 ~~~---~~~d~vid~~---g~-~---~~~~~~~~l~~~G~~v~~g~~~~ 183 (269)
... .++|++|+|+ |. . ..+..++.|++++.++.++...+
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G 288 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG 288 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence 222 2699999999 64 2 56788999999999999977554
No 134
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.66 E-value=2.3e-07 Score=71.75 Aligned_cols=81 Identities=25% Similarity=0.388 Sum_probs=65.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----ceeEecCChhhHHHHHHHHCCC--CccE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEADLNAALKRYFPE--GIDV 152 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~~--~~d~ 152 (269)
+++.++|+||++|+|.++++.+...|++|+.+.|..++++.+.++++. ...+|..+..+....+...... ++|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 458899999999999999999999999999999999999998889983 2356766642444445444433 6999
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
+++++|-
T Consensus 85 LvNNAGl 91 (246)
T COG4221 85 LVNNAGL 91 (246)
T ss_pred EEecCCC
Confidence 9999985
No 135
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=98.52 E-value=1.1e-07 Score=66.06 Aligned_cols=44 Identities=27% Similarity=0.413 Sum_probs=37.8
Q ss_pred CcccceEEEEeccCCCCCCCCCeEEec------------------------------cceeeEEEecCCceeec
Q 024337 3 PISGYGVAKVLDSENPEFSKGDLVWGM------------------------------TGWEEYSLITAPYLFKI 46 (269)
Q Consensus 3 ~i~~~G~v~~vg~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~ 46 (269)
--|++|+|+++|+++++|++||+|++. |+|+||+++++++++++
T Consensus 36 GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 36 GHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp -SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred ccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 368899999999999999999999764 78999999999998875
No 136
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.49 E-value=5.5e-06 Score=70.03 Aligned_cols=99 Identities=21% Similarity=0.205 Sum_probs=71.6
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC-
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG- 158 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g- 158 (269)
+.+|+|.|+ |.+|+.+++.++.+|++|+++++++++.+.+...++........+..++.+.+. .+|++|+|++
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVLI 240 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEcccc
Confidence 456899998 999999999999999999999999888887764566532222222213333332 5899999983
Q ss_pred --c--h--hHhhhHhhhhcCCEEEEEeccccc
Q 024337 159 --G--K--TLDAVLPNMKIRGRIAACGMISQY 184 (269)
Q Consensus 159 --~--~--~~~~~~~~l~~~G~~v~~g~~~~~ 184 (269)
. . .....++.+++++.++.++...+.
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG 272 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGG 272 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCC
Confidence 2 1 236788889999999998865543
No 137
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.48 E-value=2.2e-06 Score=73.02 Aligned_cols=104 Identities=18% Similarity=0.197 Sum_probs=77.8
Q ss_pred hhHHHHHHHhhcCC-CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHH
Q 024337 65 MTAYVGFYEVCSAK-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALK 143 (269)
Q Consensus 65 ~~a~~~l~~~~~~~-~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~ 143 (269)
..+|.++.+..++. .+++++|.|. |.+|..+++.++.+|++|+++++++.+...+. ..|+. +. ++.+.+.
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal~ 266 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAAE 266 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHHh
Confidence 44556654433544 8999999998 99999999999999999999998887766665 55653 22 2222222
Q ss_pred HHCCCCccEEEeCCCc-hhHh-hhHhhhhcCCEEEEEeccc
Q 024337 144 RYFPEGIDVYFENVGG-KTLD-AVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 144 ~~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~~ 182 (269)
++|++++|+|. ..+. ..+..+++++.++..|...
T Consensus 267 -----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 267 -----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred -----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 58999999997 4555 6788899999999988643
No 138
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.43 E-value=4.3e-06 Score=70.79 Aligned_cols=102 Identities=19% Similarity=0.228 Sum_probs=75.7
Q ss_pred hHHHHHHHhhc-CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHH
Q 024337 66 TAYVGFYEVCS-AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKR 144 (269)
Q Consensus 66 ~a~~~l~~~~~-~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~ 144 (269)
.++.++.+..+ ...|++|+|.|. |.+|+.+++.++.+|++|++++.++.+...+. ..|+. +. +..+.++
T Consensus 180 s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~------~leeal~- 249 (406)
T TIGR00936 180 STIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VM------TMEEAAK- 249 (406)
T ss_pred hHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eC------CHHHHHh-
Confidence 34444434333 368999999998 99999999999999999999988887766666 66652 22 1222222
Q ss_pred HCCCCccEEEeCCCc-hhHh-hhHhhhhcCCEEEEEecc
Q 024337 145 YFPEGIDVYFENVGG-KTLD-AVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 145 ~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~ 181 (269)
+.|++|+++|. ..+. ..+..+++++.++.+|..
T Consensus 250 ----~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 250 ----IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred ----cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 47999999997 4455 488899999999988763
No 139
>PRK08324 short chain dehydrogenase; Validated
Probab=98.43 E-value=2.7e-06 Score=77.91 Aligned_cols=140 Identities=19% Similarity=0.199 Sum_probs=88.9
Q ss_pred cceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEE
Q 024337 30 TGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVG 109 (269)
Q Consensus 30 g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~ 109 (269)
-++++|..+++..++.+ .. ++.+.+.+... ......++++++|+||+|++|..+++.+...|++|++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~---~~~e~a~l~~~---------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl 451 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EY---WSLEQAKLQRM---------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVL 451 (681)
T ss_pred hhcCCccCCChhhhcce-ee---ehhhhhhhhcC---------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEE
Confidence 35777877777766665 22 23222221100 0112236799999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHcCC--c---eeEecCChhhHHHHHHHHC--CCCccEEEeCCCc-----------------------
Q 024337 110 SAGSKDKVDLLKNKFGF--D---EAFNYKEEADLNAALKRYF--PEGIDVYFENVGG----------------------- 159 (269)
Q Consensus 110 ~~~s~~~~~~~~~~~g~--~---~~~~~~~~~~~~~~i~~~~--~~~~d~vid~~g~----------------------- 159 (269)
++++.++.+.+.+.++. . ...|..+..+....+.+.. .+++|++|+++|.
T Consensus 452 ~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 452 ADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred EeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99998887766545543 1 2345554413333333321 2379999999982
Q ss_pred ---hhHhhhHhhhhc---CCEEEEEeccc
Q 024337 160 ---KTLDAVLPNMKI---RGRIAACGMIS 182 (269)
Q Consensus 160 ---~~~~~~~~~l~~---~G~~v~~g~~~ 182 (269)
..++.+++.+++ +|+++.++...
T Consensus 532 g~~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 113445666665 58999887654
No 140
>PLN02494 adenosylhomocysteinase
Probab=98.41 E-value=4.5e-06 Score=71.43 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=78.4
Q ss_pred hhHHHHHHHhhcC-CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHH
Q 024337 65 MTAYVGFYEVCSA-KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALK 143 (269)
Q Consensus 65 ~~a~~~l~~~~~~-~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~ 143 (269)
...+.++.+..++ -.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|+.. + +..+.+.
T Consensus 238 qS~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~v-v------~leEal~ 308 (477)
T PLN02494 238 HSLPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQV-L------TLEDVVS 308 (477)
T ss_pred ccHHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCee-c------cHHHHHh
Confidence 3445565554343 57999999998 99999999999999999999998877766665 566642 2 2222332
Q ss_pred HHCCCCccEEEeCCCch-h-HhhhHhhhhcCCEEEEEecc
Q 024337 144 RYFPEGIDVYFENVGGK-T-LDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 144 ~~~~~~~d~vid~~g~~-~-~~~~~~~l~~~G~~v~~g~~ 181 (269)
..|++++|.|.. . ....+..|++++.++.+|..
T Consensus 309 -----~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 309 -----EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred -----hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 379999999974 3 47899999999999999874
No 141
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.38 E-value=2.3e-06 Score=68.06 Aligned_cols=81 Identities=20% Similarity=0.247 Sum_probs=61.7
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-------eEecCChhhHHHHHHH-HC-CC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-------AFNYKEEADLNAALKR-YF-PE 148 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-------~~~~~~~~~~~~~i~~-~~-~~ 148 (269)
..+.+++|+|||+|+|...+..+...|.+++.+.|++++++.+.+++.-.+ .+|..++ +-.+.+.+ .. .+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP-EALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHHHHHhcC
Confidence 467899999999999999999999999999999999999887765554321 3455554 33444433 22 22
Q ss_pred -CccEEEeCCCc
Q 024337 149 -GIDVYFENVGG 159 (269)
Q Consensus 149 -~~d~vid~~g~ 159 (269)
.+|+.++++|.
T Consensus 83 ~~IdvLVNNAG~ 94 (265)
T COG0300 83 GPIDVLVNNAGF 94 (265)
T ss_pred CcccEEEECCCc
Confidence 79999999994
No 142
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.33 E-value=9.4e-06 Score=66.53 Aligned_cols=93 Identities=20% Similarity=0.301 Sum_probs=73.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.+++++|+|. |.+|+.+++.++.+|++|++++++.++.+.++ ++|...+ .. . ++.+.+. ++|+||+|++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~~-~~--~-~l~~~l~-----~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSPF-HL--S-ELAEEVG-----KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeee-cH--H-HHHHHhC-----CCCEEEECCC
Confidence 5899999998 99999999999999999999999988888887 7886422 11 1 2333332 5999999998
Q ss_pred ch-hHhhhHhhhhcCCEEEEEeccc
Q 024337 159 GK-TLDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 159 ~~-~~~~~~~~l~~~G~~v~~g~~~ 182 (269)
.. .....++.+++++.++.++..+
T Consensus 220 ~~~i~~~~l~~~~~g~vIIDla~~p 244 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALIIDLASKP 244 (296)
T ss_pred hhhhhHHHHHcCCCCcEEEEEccCC
Confidence 64 3456778899999999887744
No 143
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.32 E-value=4.9e-06 Score=62.55 Aligned_cols=80 Identities=19% Similarity=0.307 Sum_probs=59.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--ceeEecCCh---hhHHHHHHHHCCCCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEE---ADLNAALKRYFPEGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~~~~~~~~~---~~~~~~i~~~~~~~~d~v 153 (269)
.|-+|||.||++|+|+..++-....|-+|++..|++++++.++..... ..+.|..+. +.+.+.+++..+ ..+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence 367999999999999999999999999999999999999998733322 235555443 124444443222 58999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
++|+|-
T Consensus 83 iNNAGI 88 (245)
T COG3967 83 INNAGI 88 (245)
T ss_pred eecccc
Confidence 999983
No 144
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.31 E-value=7.7e-06 Score=65.53 Aligned_cols=142 Identities=18% Similarity=0.240 Sum_probs=93.8
Q ss_pred CCCCCCCCCeEEeccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHhh-cCCCCCEEEEecCcchHHH
Q 024337 16 ENPEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVC-SAKHGECVFISAASGAVGQ 94 (269)
Q Consensus 16 ~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~-~~~~~~~vlI~ga~g~vG~ 94 (269)
..+.+++||+++...+|.+|.. +...++.+ +.+ +++..+.. .+...++.... .+.++++||-.|+ |. |.
T Consensus 63 ~~~p~~~g~~~~i~p~~~~~~~-~~~~~i~i-~p~--~afgtg~h----~tt~~~l~~l~~~~~~~~~VLDiGc-Gs-G~ 132 (250)
T PRK00517 63 YFHPIRIGDRLWIVPSWEDPPD-PDEINIEL-DPG--MAFGTGTH----PTTRLCLEALEKLVLPGKTVLDVGC-GS-GI 132 (250)
T ss_pred HCCCEEEcCCEEEECCCcCCCC-CCeEEEEE-CCC--CccCCCCC----HHHHHHHHHHHhhcCCCCEEEEeCC-cH-HH
Confidence 3566889999999889998855 77788888 444 45422221 22222332222 2578999999997 44 87
Q ss_pred HHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcee---EecCChhhHHHHHHHHCCC-CccEEEeCCCc----hhHhhh
Q 024337 95 LVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEA---FNYKEEADLNAALKRYFPE-GIDVYFENVGG----KTLDAV 165 (269)
Q Consensus 95 ~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~---~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~----~~~~~~ 165 (269)
.++.+++ .|+ +|++++.++...+.+++++....+ +.... +. .||+|+.+... ..+..+
T Consensus 133 l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~------------~~~~fD~Vvani~~~~~~~l~~~~ 199 (250)
T PRK00517 133 LAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ------------GDLKADVIVANILANPLLELAPDL 199 (250)
T ss_pred HHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc------------CCCCcCEEEEcCcHHHHHHHHHHH
Confidence 7776555 566 699999999988887744322111 11100 11 59999977654 346778
Q ss_pred HhhhhcCCEEEEEec
Q 024337 166 LPNMKIRGRIAACGM 180 (269)
Q Consensus 166 ~~~l~~~G~~v~~g~ 180 (269)
.+.|+++|+++..+.
T Consensus 200 ~~~LkpgG~lilsgi 214 (250)
T PRK00517 200 ARLLKPGGRLILSGI 214 (250)
T ss_pred HHhcCCCcEEEEEEC
Confidence 889999999998765
No 145
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.27 E-value=1.3e-05 Score=63.59 Aligned_cols=104 Identities=21% Similarity=0.224 Sum_probs=70.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---ce--eEecCChhhHHHHHHHHCC--CCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---DE--AFNYKEEADLNAALKRYFP--EGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~---~~--~~~~~~~~~~~~~i~~~~~--~~~d 151 (269)
++++++|+|++|++|..+++.+...|++|+.+++++++.+.+.+.+.. -. ..|..+.....+.+++... +++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999999999999998877665323321 12 2244433123322322211 3689
Q ss_pred EEEeCCCch------------------------hHhhhHhhhhcCCEEEEEeccc
Q 024337 152 VYFENVGGK------------------------TLDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 152 ~vid~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~ 182 (269)
.++.++|.. .++..++.++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 999988741 1344556667788999887643
No 146
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.27 E-value=1.4e-05 Score=57.67 Aligned_cols=93 Identities=19% Similarity=0.235 Sum_probs=64.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGIDVYFE 155 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d~vid 155 (269)
++.+++|.|+ |++|.+++..+..+|+ +|+++.|+.++.+.+.+.++.. ..++++ ++.+.+. .+|++|+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~---~~~~~~~-----~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE---DLEEALQ-----EADIVIN 81 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG---GHCHHHH-----TESEEEE
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH---HHHHHHh-----hCCeEEE
Confidence 5899999998 9999999999999999 5999999999988877677432 244443 3333333 4999999
Q ss_pred CCCchhHhhhHhhhhcC----CEEEEEec
Q 024337 156 NVGGKTLDAVLPNMKIR----GRIAACGM 180 (269)
Q Consensus 156 ~~g~~~~~~~~~~l~~~----G~~v~~g~ 180 (269)
|++.......-..+.+. +.++.++.
T Consensus 82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 82 ATPSGMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp -SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred ecCCCCcccCHHHHHHHHhhhhceecccc
Confidence 99864322222233333 46666654
No 147
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.27 E-value=2e-05 Score=64.06 Aligned_cols=78 Identities=24% Similarity=0.360 Sum_probs=58.0
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHC--CCCccEEEeCC
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDVYFENV 157 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~--~~~~d~vid~~ 157 (269)
++++|+||+|++|..+++.+...|++|++++++.++.+.+. ..+... ..|..+.+++.+.+.+.. .+++|++++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999999999999999999988877766 555543 356665423333333332 23799999999
Q ss_pred Cc
Q 024337 158 GG 159 (269)
Q Consensus 158 g~ 159 (269)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 83
No 148
>PRK12742 oxidoreductase; Provisional
Probab=98.25 E-value=2.8e-05 Score=61.62 Aligned_cols=102 Identities=19% Similarity=0.213 Sum_probs=67.4
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHcCCcee-EecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKFGFDEA-FNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
++++++|+||+|++|..+++.+...|++|+.+.+ ++++.+.+.++++...+ .|..+...+.+.+.+. +++|+++++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence 4689999999999999999999999999988765 45555554435565432 3444431233333322 369999999
Q ss_pred CCchh--------------------------HhhhHhhhhcCCEEEEEeccc
Q 024337 157 VGGKT--------------------------LDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 157 ~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~ 182 (269)
+|... ...+++.++.+|+++.++...
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 87410 123344556678999887644
No 149
>PRK06182 short chain dehydrogenase; Validated
Probab=98.22 E-value=2.9e-05 Score=63.10 Aligned_cols=80 Identities=25% Similarity=0.394 Sum_probs=58.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDVYFE 155 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~--~~~~d~vid 155 (269)
++++++|+|++|++|..+++.+...|++|+++++++++.+.+. ..+... ..|..+.+++...+.+.. .+++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3678999999999999999999999999999999988876665 444432 356665423333343332 237999999
Q ss_pred CCCc
Q 024337 156 NVGG 159 (269)
Q Consensus 156 ~~g~ 159 (269)
++|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9984
No 150
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.20 E-value=1.9e-05 Score=65.32 Aligned_cols=108 Identities=18% Similarity=0.195 Sum_probs=73.8
Q ss_pred ceeecCCCCCCcchhhhhcCCcchhHHHHHHHhhcC---CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 024337 42 YLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSA---KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKV 117 (269)
Q Consensus 42 ~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~~~~---~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~ 117 (269)
..+++ |+. ++.+.+....+..+++.++...... .++++|+|.|+ |.+|..+++.++..|+ +|+++.+++++.
T Consensus 140 ~a~~~-~k~--vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra 215 (311)
T cd05213 140 KAIKV-GKR--VRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERA 215 (311)
T ss_pred HHHHH-HHH--HhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 44556 666 4434455556777788787433221 37899999998 9999999999998776 899999998876
Q ss_pred HHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCchhH
Q 024337 118 DLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGKTL 162 (269)
Q Consensus 118 ~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~ 162 (269)
+.+.+++|.. +++.. +..+.+. .+|+||.|++....
T Consensus 216 ~~la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 216 EELAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCch
Confidence 5444388873 33321 3333332 48999999997443
No 151
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.15 E-value=4.9e-05 Score=61.34 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=57.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHC--CCCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF--PEGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~v 153 (269)
++++++|+|+++++|..+++.+...|++|++++++.++.+.+.++++... ..|..+.+++.+.+.+.. -+++|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46899999999999999999999999999999999887666554555321 245554423333333321 1368999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
++++|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 999873
No 152
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.11 E-value=4.1e-05 Score=62.36 Aligned_cols=79 Identities=18% Similarity=0.320 Sum_probs=58.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHH---HCCCCccEEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKR---YFPEGIDVYF 154 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~---~~~~~~d~vi 154 (269)
.+++++|+||+|++|..+++.+...|++|+++++++++.+.+. ..+... ..|..+..++...+.+ ..++++|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999999999999999999999999999999998887776 555543 3465554223233332 2335799999
Q ss_pred eCCC
Q 024337 155 ENVG 158 (269)
Q Consensus 155 d~~g 158 (269)
+++|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9987
No 153
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=98.09 E-value=1.7e-05 Score=55.12 Aligned_cols=95 Identities=20% Similarity=0.283 Sum_probs=66.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGIDVYF 154 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~-~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 154 (269)
|+.+||-.|+ |.|..++.+++ ..+++|++++.+++..+.+++.+ +...-+..... ++ . ......++||+|+
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~-~-~~~~~~~~~D~v~ 75 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA-E-FDPDFLEPFDLVI 75 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC-H-GGTTTSSCEEEEE
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc-c-cCcccCCCCCEEE
Confidence 6889999996 67999999998 47889999999999999888665 33221211111 33 1 1111223799999
Q ss_pred eCC-Cc----hh------HhhhHhhhhcCCEEEEE
Q 024337 155 ENV-GG----KT------LDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 155 d~~-g~----~~------~~~~~~~l~~~G~~v~~ 178 (269)
... .. .. ++.+.+.|+|+|+++.-
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 877 22 22 67888999999998863
No 154
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.08 E-value=5.5e-05 Score=60.78 Aligned_cols=105 Identities=25% Similarity=0.335 Sum_probs=72.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce-----eEecCChhhHHHHHHHHC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE-----AFNYKEEADLNAALKRYF--PE 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~-----~~~~~~~~~~~~~i~~~~--~~ 148 (269)
.++.|+|+||++|+|.+++.-.-..|++++.+.+..++++.+.+ +.+... ..|..+..+..+.+.+.. -|
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999998888888777766521 333322 234444313333333222 24
Q ss_pred CccEEEeCCCchh--------------------------HhhhHhhhhcC--CEEEEEecccc
Q 024337 149 GIDVYFENVGGKT--------------------------LDAVLPNMKIR--GRIAACGMISQ 183 (269)
Q Consensus 149 ~~d~vid~~g~~~--------------------------~~~~~~~l~~~--G~~v~~g~~~~ 183 (269)
++|+.++++|-.. .+.++..|++. |+++.++...+
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 8999999998410 25577777763 99999987665
No 155
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.08 E-value=0.0001 Score=59.59 Aligned_cols=105 Identities=22% Similarity=0.320 Sum_probs=70.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc---eeEecCChhhHHHHHHHHC-CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD---EAFNYKEEADLNAALKRYF-PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~i~~~~-~~~~ 150 (269)
++++++|+|+++++|.++++.+...|++|++++++.++.+.+.+++ +.. ...|..+..+....+.+.. -+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4789999999999999999999999999999999988766554333 221 1345454323333333322 1479
Q ss_pred cEEEeCCCch--------------------------hHhhhHhhhhc--CCEEEEEecccc
Q 024337 151 DVYFENVGGK--------------------------TLDAVLPNMKI--RGRIAACGMISQ 183 (269)
Q Consensus 151 d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 183 (269)
|++++++|.. ..+.+++.|+. .|++|.++....
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~ 147 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI 147 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence 9999998741 02345555543 489998876543
No 156
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.06 E-value=3.6e-05 Score=63.38 Aligned_cols=81 Identities=21% Similarity=0.268 Sum_probs=59.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-e--e--EecCChhhHHHHHHHHCC--CCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--A--FNYKEEADLNAALKRYFP--EGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--~--~~~~~~~~~~~~i~~~~~--~~~d 151 (269)
++++++|+||+|++|..+++.+...|++|+++++++++.+.+.++++.. . . .|..+..+..+.+.+... +++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999999999999999999999988877665466531 1 1 455553233333333221 3799
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++|+++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999984
No 157
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.04 E-value=7.4e-05 Score=64.29 Aligned_cols=91 Identities=18% Similarity=0.212 Sum_probs=70.4
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
.-.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|+. +. ++.+.++ ..|+++.+
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~-~~------~leell~-----~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQ-VV------TLEDVVE-----TADIFVTA 316 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCce-ec------cHHHHHh-----cCCEEEEC
Confidence 357999999998 99999999999999999999987766655555 44543 11 2333332 48999999
Q ss_pred CCc-hhH-hhhHhhhhcCCEEEEEecc
Q 024337 157 VGG-KTL-DAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 157 ~g~-~~~-~~~~~~l~~~G~~v~~g~~ 181 (269)
+|. ..+ ...+..|++++.++.+|..
T Consensus 317 tGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred CCcccccCHHHHhccCCCcEEEEcCCC
Confidence 997 445 4799999999999999864
No 158
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=98.02 E-value=2.9e-05 Score=63.53 Aligned_cols=96 Identities=20% Similarity=0.156 Sum_probs=64.0
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC---CceeEecCChhhHHHHHHHHCCCCccE
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEADLNAALKRYFPEGIDV 152 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~~~~d~ 152 (269)
..++++||-.|+ |. |..++.+++ .|+ +|++++.++...+.+++++. ....+..... + ......++||+
T Consensus 157 ~~~g~~VLDvGc-Gs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDl 228 (288)
T TIGR00406 157 DLKDKNVIDVGC-GS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADV 228 (288)
T ss_pred cCCCCEEEEeCC-Ch-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceE
Confidence 467899999997 43 888877766 465 99999999998887774332 2111111111 1 11122348999
Q ss_pred EEeCCCc----hhHhhhHhhhhcCCEEEEEec
Q 024337 153 YFENVGG----KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 153 vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 180 (269)
|+..... ..+..+.+.|+++|.++..|.
T Consensus 229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sgi 260 (288)
T TIGR00406 229 IVANILAEVIKELYPQFSRLVKPGGWLILSGI 260 (288)
T ss_pred EEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 9876653 356778899999999998765
No 159
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.00 E-value=6.7e-05 Score=60.26 Aligned_cols=81 Identities=17% Similarity=0.179 Sum_probs=58.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE 155 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid 155 (269)
++++++|+||+|++|..+++.+...|++|+++++++++.+...++++.. ...|..+..+....+.+.. -+++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999999999999999999999999999999888766654355543 2345555422333333221 136899999
Q ss_pred CCCc
Q 024337 156 NVGG 159 (269)
Q Consensus 156 ~~g~ 159 (269)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9874
No 160
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.00 E-value=9.6e-05 Score=61.91 Aligned_cols=105 Identities=24% Similarity=0.223 Sum_probs=69.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++++++|+||+|++|..+++.+...|++|+++++++++.+.+.++ .|... ..|..+..+....+.+.. -+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 467899999999999999999999999999999998876554322 34322 245555412322222221 1379
Q ss_pred cEEEeCCCch--------------------------hHhhhHhhhhc--CCEEEEEecccc
Q 024337 151 DVYFENVGGK--------------------------TLDAVLPNMKI--RGRIAACGMISQ 183 (269)
Q Consensus 151 d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 183 (269)
|++|+++|.. ..+.+++.+.+ .|++|.++....
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~ 147 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 9999999841 01234555554 589998876543
No 161
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.97 E-value=0.0009 Score=53.80 Aligned_cols=81 Identities=11% Similarity=0.141 Sum_probs=54.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--CCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~-V~~~~~s~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
++++++|.|++|++|..+++.+...|++ |++++++.++.+...+ ..+.. ..+|..+..++.+.+.... -++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5688999999999999999999999998 9999988765543221 23332 1245555412333232221 136
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|.+|++.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999984
No 162
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.97 E-value=7.3e-05 Score=60.33 Aligned_cols=80 Identities=21% Similarity=0.288 Sum_probs=57.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~v 153 (269)
++++++|+||++++|..+++.+...|++|+++++++++.+.+.+.++.. ...|..+..+....+.+.. -+++|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4689999999999999999999999999999999988877766455431 1234444313333333322 1379999
Q ss_pred EeCCC
Q 024337 154 FENVG 158 (269)
Q Consensus 154 id~~g 158 (269)
++++|
T Consensus 85 i~~ag 89 (263)
T PRK06200 85 VGNAG 89 (263)
T ss_pred EECCC
Confidence 99988
No 163
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.96 E-value=5.7e-05 Score=63.11 Aligned_cols=81 Identities=25% Similarity=0.374 Sum_probs=57.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHH--CCCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRY--FPEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~--~~~~~ 150 (269)
++++++|+||++++|..+++.+...|++|+++++++++.+.+.+ +.|... ..|..+.++..+.+.+. ..+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999999887765442 334432 34555541222222222 12479
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|+++|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999983
No 164
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.95 E-value=0.00018 Score=58.67 Aligned_cols=92 Identities=21% Similarity=0.306 Sum_probs=68.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.+++++|.|. |.+|.++++.++.+|++|++..+++++.+.+. +.|.. .++. . ++.+.+. ++|++++|++
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~-~~~~--~-~l~~~l~-----~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLI-PFPL--N-KLEEKVA-----EIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-eecH--H-HHHHHhc-----cCCEEEECCC
Confidence 4789999998 99999999999999999999999988777666 66643 2211 1 3333332 5899999998
Q ss_pred chhH-hhhHhhhhcCCEEEEEecc
Q 024337 159 GKTL-DAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 159 ~~~~-~~~~~~l~~~G~~v~~g~~ 181 (269)
...+ ...++.++++..++.++..
T Consensus 219 ~~ii~~~~l~~~k~~aliIDlas~ 242 (287)
T TIGR02853 219 ALVLTADVLSKLPKHAVIIDLASK 242 (287)
T ss_pred hHHhCHHHHhcCCCCeEEEEeCcC
Confidence 6432 4566778888888888663
No 165
>PRK06484 short chain dehydrogenase; Validated
Probab=97.95 E-value=0.00014 Score=64.76 Aligned_cols=105 Identities=19% Similarity=0.214 Sum_probs=73.7
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~v 153 (269)
.+++++|+||++++|..+++.+...|++|+++++++++.+.+.++++... ..|..+..+....+.+... +++|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 47899999999999999999999999999999999888877764565432 3455554233333333221 369999
Q ss_pred EeCCCch----h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337 154 FENVGGK----T-----------------------LDAVLPNMKIRGRIAACGMISQ 183 (269)
Q Consensus 154 id~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 183 (269)
|+++|.. . .+.++..++.+|+++.++....
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 9998831 0 2334555656799998876543
No 166
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.94 E-value=9.7e-05 Score=63.81 Aligned_cols=91 Identities=21% Similarity=0.264 Sum_probs=64.7
Q ss_pred hcCCcchhHHHHHHHhhc---CCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCC
Q 024337 59 ILGMPGMTAYVGFYEVCS---AKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKE 134 (269)
Q Consensus 59 ~l~~~~~~a~~~l~~~~~---~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~ 134 (269)
....+..+++.++..... -.++++|+|+|+ |.+|.++++.++..|+ +|+++.++.++.+.+.+.+|.. +++..
T Consensus 158 i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~- 234 (423)
T PRK00045 158 IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD- 234 (423)
T ss_pred CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH-
Confidence 334466777777743322 257899999998 9999999999999998 8999999988866444377753 33321
Q ss_pred hhhHHHHHHHHCCCCccEEEeCCCc
Q 024337 135 EADLNAALKRYFPEGIDVYFENVGG 159 (269)
Q Consensus 135 ~~~~~~~i~~~~~~~~d~vid~~g~ 159 (269)
+..+.+. ++|+||+|+|.
T Consensus 235 --~~~~~l~-----~aDvVI~aT~s 252 (423)
T PRK00045 235 --ELPEALA-----EADIVISSTGA 252 (423)
T ss_pred --HHHHHhc-----cCCEEEECCCC
Confidence 3323232 58999999996
No 167
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.93 E-value=0.00015 Score=57.80 Aligned_cols=79 Identities=19% Similarity=0.243 Sum_probs=57.4
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENV 157 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 157 (269)
++.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+..+... ..|..+. +....+.+. .+++|++|+++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~-~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDD-AAIRAALAA-AGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCH-HHHHHHHHH-hCCCCEEEECC
Confidence 46799999999999999999999999999999999887766653555432 3455543 322222221 23699999999
Q ss_pred Cc
Q 024337 158 GG 159 (269)
Q Consensus 158 g~ 159 (269)
|.
T Consensus 86 g~ 87 (245)
T PRK07060 86 GI 87 (245)
T ss_pred CC
Confidence 84
No 168
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.93 E-value=9.1e-05 Score=59.77 Aligned_cols=80 Identities=20% Similarity=0.227 Sum_probs=56.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d~v 153 (269)
++++++|+||+|++|..+++.+...|++|++++++.++.+.+.+..+.. ...|..+..+..+.+.+... +++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4789999999999999999999999999999999988777666333321 12344443133333333221 368999
Q ss_pred EeCCC
Q 024337 154 FENVG 158 (269)
Q Consensus 154 id~~g 158 (269)
++++|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99987
No 169
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.91 E-value=0.0001 Score=59.89 Aligned_cols=80 Identities=20% Similarity=0.210 Sum_probs=57.0
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-Cce-eEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-FDE-AFNYKEEADLNAALKRYF--PEGIDVYFE 155 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-~~~-~~~~~~~~~~~~~i~~~~--~~~~d~vid 155 (269)
+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.++ ... ..|..+..++.+.+.+.. -+++|++++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999999999999999988899999999999888766543555 222 345555423333333222 137999999
Q ss_pred CCCc
Q 024337 156 NVGG 159 (269)
Q Consensus 156 ~~g~ 159 (269)
++|.
T Consensus 85 ~ag~ 88 (273)
T PRK07825 85 NAGV 88 (273)
T ss_pred CCCc
Confidence 9883
No 170
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.91 E-value=0.00025 Score=62.61 Aligned_cols=104 Identities=13% Similarity=0.189 Sum_probs=68.5
Q ss_pred hhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--------CC------c-eeEecCChhhH
Q 024337 74 VCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--------GF------D-EAFNYKEEADL 138 (269)
Q Consensus 74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~--------g~------~-~~~~~~~~~~~ 138 (269)
..+.+.+++++|+||+|++|..+++.+...|++|++++|+.++.+.+.+.+ |. . ...|..+.
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~--- 150 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP--- 150 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH---
Confidence 345678999999999999999999999999999999999988775543221 21 1 12344332
Q ss_pred HHHHHHHCCCCccEEEeCCCchh----------------HhhhHhhhhc--CCEEEEEeccc
Q 024337 139 NAALKRYFPEGIDVYFENVGGKT----------------LDAVLPNMKI--RGRIAACGMIS 182 (269)
Q Consensus 139 ~~~i~~~~~~~~d~vid~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~ 182 (269)
+.+.+.. +++|++|+|+|... ....++.+.. .++||.++...
T Consensus 151 -esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 151 -DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred -HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 2233322 36999999998420 1223333333 36899887654
No 171
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.90 E-value=0.00027 Score=61.75 Aligned_cols=80 Identities=19% Similarity=0.302 Sum_probs=55.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHcCCce-eEecCChhhHHHHH-HHHC--CCCccE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLKNKFGFDE-AFNYKEEADLNAAL-KRYF--PEGIDV 152 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~--~~~~~~~~~~g~~~-~~~~~~~~~~~~~i-~~~~--~~~~d~ 152 (269)
++++++|+|++|++|..+++.+...|++|++++++. ++.+.+.++++... .+|..+. +..+.+ .... .+++|+
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAP-DAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHHHHhCCCCCE
Confidence 578999999999999999999999999999998742 33333333555432 3566554 333332 2221 136999
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
+|+++|.
T Consensus 288 vi~~AG~ 294 (450)
T PRK08261 288 VVHNAGI 294 (450)
T ss_pred EEECCCc
Confidence 9999983
No 172
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.88 E-value=0.00019 Score=54.86 Aligned_cols=110 Identities=19% Similarity=0.266 Sum_probs=76.2
Q ss_pred cCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCcee-EecCCh
Q 024337 60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEE 135 (269)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~-~~~~~~ 135 (269)
+..+...|. ++ +...++++++||=.|. |.|+.++-+++..| +|+.+.+.++=.+.+++ .+|...+ +...+.
T Consensus 55 is~P~~vA~-m~-~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG 129 (209)
T COG2518 55 ISAPHMVAR-ML-QLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDG 129 (209)
T ss_pred ecCcHHHHH-HH-HHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc
Confidence 333434443 33 5678999999999995 77999999999988 99999988774443322 6777442 222211
Q ss_pred hhHHHHHHHHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337 136 ADLNAALKRYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 136 ~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~ 180 (269)
...+.+. +||.|+-+.+. ..-+..++.|+++|+++..-.
T Consensus 130 ------~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 130 ------SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred ------ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 1222333 89999888886 555778899999999987644
No 173
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.88 E-value=0.00022 Score=57.38 Aligned_cols=107 Identities=22% Similarity=0.187 Sum_probs=74.0
Q ss_pred cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEe---cCCh----hhHHHH-HHHH--
Q 024337 76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFN---YKEE----ADLNAA-LKRY-- 145 (269)
Q Consensus 76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~---~~~~----~~~~~~-i~~~-- 145 (269)
+-++...|+|.|++.|+|++.+..++..|++|..+.|+.+++..+++.++....+. +.+. .+.++. +++.
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~ 108 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD 108 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence 34566899999999999999999999999999999999999988876776532111 1111 022222 2222
Q ss_pred CCCCccEEEeCCCchh--------------------------HhhhHhhhhc---CCEEEEEeccc
Q 024337 146 FPEGIDVYFENVGGKT--------------------------LDAVLPNMKI---RGRIAACGMIS 182 (269)
Q Consensus 146 ~~~~~d~vid~~g~~~--------------------------~~~~~~~l~~---~G~~v~~g~~~ 182 (269)
..+.+|.+|+|+|... ...+++.++. .|+++.++...
T Consensus 109 ~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~ 174 (331)
T KOG1210|consen 109 LEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQL 174 (331)
T ss_pred ccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhh
Confidence 1247999999999621 2445555654 35888887644
No 174
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.88 E-value=0.00011 Score=61.10 Aligned_cols=80 Identities=15% Similarity=0.215 Sum_probs=57.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----C-Cc---eeEecCC--hhhHHHHHHHHCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----G-FD---EAFNYKE--EADLNAALKRYFPE 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g-~~---~~~~~~~--~~~~~~~i~~~~~~ 148 (269)
.|++++|+||++|+|...++.+...|++|+.+++++++.+.+.+++ + .. ...|..+ . +..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDID-EGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcH-HHHHHHHHHhcC
Confidence 4789999999999999999999889999999999998876554332 1 11 1334432 2 334445444444
Q ss_pred -CccEEEeCCCc
Q 024337 149 -GIDVYFENVGG 159 (269)
Q Consensus 149 -~~d~vid~~g~ 159 (269)
.+|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 67799999873
No 175
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.88 E-value=0.00022 Score=56.92 Aligned_cols=81 Identities=17% Similarity=0.208 Sum_probs=55.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
++.+++|+|++|++|..++..+...|++|+++++++++.+...+.+ +.. . ..|..+.++....+.+... +++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999998887665443232 322 1 2355443122222222211 379
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999984
No 176
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.88 E-value=8.5e-05 Score=60.05 Aligned_cols=80 Identities=20% Similarity=0.238 Sum_probs=55.4
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++++++|+||+|++|..+++.+...|++|+++++++++.+...+.+ +.. ..+|..+..+....+++.. -+++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999999999877654432232 221 1245554423333344332 1368
Q ss_pred cEEEeCCC
Q 024337 151 DVYFENVG 158 (269)
Q Consensus 151 d~vid~~g 158 (269)
|++|.+.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99999886
No 177
>PRK08017 oxidoreductase; Provisional
Probab=97.86 E-value=0.00022 Score=57.21 Aligned_cols=78 Identities=18% Similarity=0.273 Sum_probs=57.9
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHH---HHHHHHCCCCccEEEeC
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLN---AALKRYFPEGIDVYFEN 156 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~---~~i~~~~~~~~d~vid~ 156 (269)
++++|+|++|++|..+++.+...|++|++++++.++.+.++ ..+... ..|..+..+.. +.+.+...+++|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999999999999999999999999999999998888777 667643 34555431222 23333333578999988
Q ss_pred CCc
Q 024337 157 VGG 159 (269)
Q Consensus 157 ~g~ 159 (269)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 873
No 178
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00023 Score=56.85 Aligned_cols=102 Identities=19% Similarity=0.222 Sum_probs=64.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCc---eeEecCChhhHHHHHHHHCC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFD---EAFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
++++++|+||+|++|..++..+...|.+|+++.++.+ +.+.+.+ ..+.. ...|..+..+....+.+... ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3678999999999999999999999999999887643 3332221 22321 12355554233333333221 36
Q ss_pred ccEEEeCCCch--------------------hHhhhHhhhhcCCEEEEEec
Q 024337 150 IDVYFENVGGK--------------------TLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 150 ~d~vid~~g~~--------------------~~~~~~~~l~~~G~~v~~g~ 180 (269)
+|+++.++|.. .++.+.+.+..+|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 89999888631 12345555555688988865
No 179
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.86 E-value=0.00016 Score=54.96 Aligned_cols=92 Identities=17% Similarity=0.215 Sum_probs=64.4
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCCc--
Q 024337 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVGG-- 159 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-- 159 (269)
|+|+||+|.+|..+++.+...|.+|++++|++++.+. ..+.+. ..|..+. +.+.+... ++|.||++.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~----~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDP----DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCH----HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhh----hhhhhhhh-hcchhhhhhhhhc
Confidence 7899999999999999999999999999999887765 223322 2333332 22333222 59999999983
Q ss_pred ---hhHhhhHhhhhcCC--EEEEEeccc
Q 024337 160 ---KTLDAVLPNMKIRG--RIAACGMIS 182 (269)
Q Consensus 160 ---~~~~~~~~~l~~~G--~~v~~g~~~ 182 (269)
......++.++..| +++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 34555666665544 788776644
No 180
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00013 Score=58.94 Aligned_cols=81 Identities=16% Similarity=0.213 Sum_probs=56.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CC-c---eeEecCChhhHHHHHHHHC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GF-D---EAFNYKEEADLNAALKRYF--PE 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~-~---~~~~~~~~~~~~~~i~~~~--~~ 148 (269)
++++++|+||++++|..+++.+...|++|+.+++++++.+.+.+++ +. . ...|..+..+..+.+.+.. -+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999999987765543222 11 1 1235555423333333322 13
Q ss_pred CccEEEeCCCc
Q 024337 149 GIDVYFENVGG 159 (269)
Q Consensus 149 ~~d~vid~~g~ 159 (269)
++|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999983
No 181
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00016 Score=58.23 Aligned_cols=83 Identities=14% Similarity=0.179 Sum_probs=57.6
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc----eeEecCChhhHHHHHHHHC--CCCc
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~----~~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
.-++.+++|+||+|++|..+++.+...|++|+++.++++..+.+.+...-. ...|..+.....+.+.+.. -+++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 357799999999999999999999999999999999887766655233222 2345444312222222221 1369
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|.++|.
T Consensus 88 d~vi~~ag~ 96 (264)
T PRK12829 88 DVLVNNAGI 96 (264)
T ss_pred CEEEECCCC
Confidence 999999884
No 182
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00012 Score=58.70 Aligned_cols=81 Identities=23% Similarity=0.287 Sum_probs=56.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++++++|+|+++++|..+++.+...|++|++++++.++.+.+.+++ +.. ...|..+..+..+.+.+.. -+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999999999999999988766554333 221 1244444323333333321 1379
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++++++|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999873
No 183
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00013 Score=58.73 Aligned_cols=81 Identities=15% Similarity=0.132 Sum_probs=55.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----Cc---eeEecCChhhHHHHHHHHC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-----FD---EAFNYKEEADLNAALKRYF--PE 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-----~~---~~~~~~~~~~~~~~i~~~~--~~ 148 (269)
.+++++|.|+++++|..+++.+...|++|+.+++++++.+.+.+++. .. ...|..+..++...+.+.. -+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46899999999999999999999999999999998887665543332 11 1234444313333333221 13
Q ss_pred CccEEEeCCCc
Q 024337 149 GIDVYFENVGG 159 (269)
Q Consensus 149 ~~d~vid~~g~ 159 (269)
++|++++++|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999983
No 184
>PRK06196 oxidoreductase; Provisional
Probab=97.83 E-value=0.00018 Score=59.75 Aligned_cols=80 Identities=15% Similarity=0.237 Sum_probs=56.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-Cc-eeEecCChhhHHHHHHHHC--CCCccEEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-FD-EAFNYKEEADLNAALKRYF--PEGIDVYF 154 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vi 154 (269)
.+.+++|+||+|++|..++..+...|++|++++++.++.+.+.+++. .. ...|..+..+....+.+.. .+++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 46899999999999999999999999999999999887665442332 21 1345554323333333332 24799999
Q ss_pred eCCC
Q 024337 155 ENVG 158 (269)
Q Consensus 155 d~~g 158 (269)
+++|
T Consensus 105 ~nAg 108 (315)
T PRK06196 105 NNAG 108 (315)
T ss_pred ECCC
Confidence 9997
No 185
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00015 Score=57.03 Aligned_cols=78 Identities=19% Similarity=0.186 Sum_probs=55.5
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
++++|+|++|++|...++.+...|++|+++++++++.+.++ +++-.. .+|..+..++.+.+.....+++|+++.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 57999999999999999999999999999999887766555 443222 345555413333333333347999999886
Q ss_pred c
Q 024337 159 G 159 (269)
Q Consensus 159 ~ 159 (269)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 3
No 186
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00018 Score=59.68 Aligned_cols=81 Identities=16% Similarity=0.163 Sum_probs=55.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCc---eeEecCChhhHHHHHHHHC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFD---EAFNYKEEADLNAALKRYF--PE 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g~~---~~~~~~~~~~~~~~i~~~~--~~ 148 (269)
++++++|+||++++|..+++.+...|++|++++|+.++.+.+.+++ +.. ..+|..+..+....+.+.. .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999999999987765443232 111 1235544312333333322 23
Q ss_pred CccEEEeCCCc
Q 024337 149 GIDVYFENVGG 159 (269)
Q Consensus 149 ~~d~vid~~g~ 159 (269)
++|++|+++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 79999999873
No 187
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00019 Score=57.28 Aligned_cols=81 Identities=15% Similarity=0.170 Sum_probs=56.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHC--CCCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF--PEGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~v 153 (269)
++++++|.||+|++|...++.+...|++|+++++++++.+.+.++++... ..|..+..+....+.... .+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46799999999999999999999999999999998877665554666432 234333212222222221 1369999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
|.++|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999873
No 188
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00014 Score=59.83 Aligned_cols=81 Identities=21% Similarity=0.350 Sum_probs=55.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
.+.+++|+||+|++|...++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..+..+.+.... -+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999999999999999988766554232 222 1 234444312333333221 1379
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++++|+|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999984
No 189
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.81 E-value=0.00047 Score=53.20 Aligned_cols=99 Identities=21% Similarity=0.307 Sum_probs=68.7
Q ss_pred hhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HcCC-ceeEecCChhhHHHHHHHHCC
Q 024337 74 VCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKN---KFGF-DEAFNYKEEADLNAALKRYFP 147 (269)
Q Consensus 74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~---~~g~-~~~~~~~~~~~~~~~i~~~~~ 147 (269)
...+.++++|+..|+ |. |.+++.+++..+ .+|++++.+++..+.+++ .++. +.+..... +..+.+.. ..
T Consensus 35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~--d~~~~l~~-~~ 109 (198)
T PRK00377 35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG--EAPEILFT-IN 109 (198)
T ss_pred HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe--chhhhHhh-cC
Confidence 457889999999997 44 999999998764 599999999998887653 3452 22211111 22222222 22
Q ss_pred CCccEEEeCCCc----hhHhhhHhhhhcCCEEEE
Q 024337 148 EGIDVYFENVGG----KTLDAVLPNMKIRGRIAA 177 (269)
Q Consensus 148 ~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~ 177 (269)
+.||.||...+. ..+..+.+.|+++|+++.
T Consensus 110 ~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 110 EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 479999986552 467788899999999985
No 190
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.81 E-value=7.4e-05 Score=67.13 Aligned_cols=77 Identities=17% Similarity=0.296 Sum_probs=57.6
Q ss_pred cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC---------------------HHHHHHHHHHcCCceeEecCC
Q 024337 76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS---------------------KDKVDLLKNKFGFDEAFNYKE 134 (269)
Q Consensus 76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s---------------------~~~~~~~~~~~g~~~~~~~~~ 134 (269)
...++++|+|.|+ |+.|+++++.++.+|++|++++.. ..+.+.++ ++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence 3678999999999 999999999999999999998842 34566777 889876665432
Q ss_pred -hhhH-HHHHHHHCCCCccEEEeCCCc
Q 024337 135 -EADL-NAALKRYFPEGIDVYFENVGG 159 (269)
Q Consensus 135 -~~~~-~~~i~~~~~~~~d~vid~~g~ 159 (269)
. +. .+.+. .++|++|+++|.
T Consensus 211 ~~-~~~~~~~~----~~~D~Vi~AtG~ 232 (564)
T PRK12771 211 GE-DITLEQLE----GEFDAVFVAIGA 232 (564)
T ss_pred CC-cCCHHHHH----hhCCEEEEeeCC
Confidence 1 21 11221 269999999996
No 191
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00017 Score=57.93 Aligned_cols=82 Identities=20% Similarity=0.293 Sum_probs=56.9
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC-ce--eEecCChhhHHHHHHHHC--CCC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF-DE--AFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~-~~--~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
..+++++|+||+|++|..++..+...|++|+++++++++.+.+.+.+ +. .. ..|..+.+++.+.+.+.. .++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 34789999999999999999999999999999999988776554232 11 11 234444323333333321 237
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|++++++|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999983
No 192
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.80 E-value=0.00024 Score=55.92 Aligned_cols=76 Identities=13% Similarity=0.197 Sum_probs=54.8
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
+++|+||++++|...++.+...|++|+.+.+++++.+.+.++++... ..|..+..++.+.+++.. +++|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 58999999999999999999999999999999888776553555432 345555423333333332 36899999865
No 193
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00014 Score=58.41 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=56.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++ +.. ...|..+.+++...+.+... +++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 5789999999999999999999999999999999887765554333 221 23444443233333333211 368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|.++|.
T Consensus 84 d~vi~~ag~ 92 (258)
T PRK07890 84 DALVNNAFR 92 (258)
T ss_pred cEEEECCcc
Confidence 999999973
No 194
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00018 Score=58.02 Aligned_cols=81 Identities=16% Similarity=0.244 Sum_probs=55.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
++.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+.....+.+.+... +++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999999999999999999999999999887765544232 222 1 2455554122222332211 379
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|+++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999873
No 195
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.78 E-value=0.00018 Score=57.74 Aligned_cols=81 Identities=26% Similarity=0.370 Sum_probs=55.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHCC--CCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
++++++|+||++++|..+++.+...|++|+.+++++++.+.+.+++ +... ..|..+.++....+.+... +++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999999999999999999999999999999988766554333 3221 2344443122333333221 379
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|+++.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999973
No 196
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.77 E-value=0.00017 Score=57.65 Aligned_cols=81 Identities=20% Similarity=0.279 Sum_probs=56.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--Cc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG--FD---EAFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g--~~---~~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+. .. ...|..+.+++...+.+.. -+++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46799999999999999999999999999999999887666543433 11 1234444323333333321 13699
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++|.++|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999974
No 197
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.77 E-value=7.4e-05 Score=60.41 Aligned_cols=102 Identities=20% Similarity=0.275 Sum_probs=63.2
Q ss_pred HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCC
Q 024337 71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFP 147 (269)
Q Consensus 71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~ 147 (269)
+.+.+++++|++||-+|+ |.|..+..+++..|++|++++.|++..+.+++ +.|....+..... ++ ++..
T Consensus 54 ~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~----~~~~- 125 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DY----RDLP- 125 (273)
T ss_dssp HHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--G----GG---
T ss_pred HHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ec----cccC-
Confidence 445678999999999996 68999999999999999999999998887754 3444321111111 22 1111
Q ss_pred CCccEEEe-----CCCc----hhHhhhHhhhhcCCEEEEEec
Q 024337 148 EGIDVYFE-----NVGG----KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 148 ~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g~ 180 (269)
++||.|+. .+|. ..++.+.+.|+|+|+++.-..
T Consensus 126 ~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~i 167 (273)
T PF02353_consen 126 GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQTI 167 (273)
T ss_dssp -S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEEE
T ss_pred CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEec
Confidence 26998754 4442 347788899999999986543
No 198
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.76 E-value=0.00028 Score=60.07 Aligned_cols=107 Identities=18% Similarity=0.123 Sum_probs=74.6
Q ss_pred hhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHH
Q 024337 65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKR 144 (269)
Q Consensus 65 ~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~ 144 (269)
...+..+.+..+++++++||.+|+ |.|..+..+++..|++|++++.|++..+.+++.. ...-++.... ++. +
T Consensus 153 ~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~~----~ 224 (383)
T PRK11705 153 EAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DYR----D 224 (383)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-chh----h
Confidence 344444555677899999999996 6788889999988999999999999999988443 2111221111 221 1
Q ss_pred HCCCCccEEEeC-----CCc----hhHhhhHhhhhcCCEEEEEec
Q 024337 145 YFPEGIDVYFEN-----VGG----KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 145 ~~~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~ 180 (269)
. .+.||.|+.. +|. ..++.+.+.|+|+|.++....
T Consensus 225 l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i 268 (383)
T PRK11705 225 L-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI 268 (383)
T ss_pred c-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 1 3479988643 342 357788899999999987643
No 199
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00064 Score=55.17 Aligned_cols=78 Identities=14% Similarity=0.158 Sum_probs=53.1
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc----eeEecCChhhHHHHHHHHC--CCCccE
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD----EAFNYKEEADLNAALKRYF--PEGIDV 152 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~----~~~~~~~~~~~~~~i~~~~--~~~~d~ 152 (269)
+++|+||+|++|..+++.+...|++|+++.++++..+.+.++ .+.. ...|..+.++..+.+.+.. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 689999999999999999999999999999887765443222 2322 1346555422222222221 136999
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
+++++|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999984
No 200
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00025 Score=57.74 Aligned_cols=81 Identities=20% Similarity=0.175 Sum_probs=56.7
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d~v 153 (269)
.+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+..+.. ...|..+.......+++... +++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3578999999999999999999999999999999988877665232221 12355443133333333221 368999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
++++|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999985
No 201
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.75 E-value=0.00026 Score=53.83 Aligned_cols=105 Identities=17% Similarity=0.286 Sum_probs=75.7
Q ss_pred CCCEEEEecC-cchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChh---hHHHHHHHHCCCCccEE
Q 024337 79 HGECVFISAA-SGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEA---DLNAALKRYFPEGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga-~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~---~~~~~i~~~~~~~~d~v 153 (269)
....|||.|+ .||+|.+.+.-....|+.|+++.|+-+....+..++|.. +-+|..++. .+...++..+.|+.|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 3467888876 789999999999999999999999999877766588873 345655541 24455566666799999
Q ss_pred EeCCCch----h---------------------Hhhh--HhhhhcCCEEEEEecccc
Q 024337 154 FENVGGK----T---------------------LDAV--LPNMKIRGRIAACGMISQ 183 (269)
Q Consensus 154 id~~g~~----~---------------------~~~~--~~~l~~~G~~v~~g~~~~ 183 (269)
++.+|-. . +..+ -.+++..|++|.+|...+
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~ 142 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG 142 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence 9988741 1 1111 224567899999987654
No 202
>PRK09186 flagellin modification protein A; Provisional
Probab=97.75 E-value=0.00024 Score=56.99 Aligned_cols=80 Identities=16% Similarity=0.209 Sum_probs=55.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc---e-eEecCChhhHHHHHHHHCC--C
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD---E-AFNYKEEADLNAALKRYFP--E 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~---~-~~~~~~~~~~~~~i~~~~~--~ 148 (269)
++++++|+|++|++|..++..+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+.+... +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999887765543333 221 1 2355544233333333221 3
Q ss_pred CccEEEeCCC
Q 024337 149 GIDVYFENVG 158 (269)
Q Consensus 149 ~~d~vid~~g 158 (269)
++|+++++++
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6899999985
No 203
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.00031 Score=56.67 Aligned_cols=83 Identities=23% Similarity=0.309 Sum_probs=56.4
Q ss_pred CCCCCEEEEecCcc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCCce----eEecCChhhHHHHHHHHC-
Q 024337 77 AKHGECVFISAASG-AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK----FGFDE----AFNYKEEADLNAALKRYF- 146 (269)
Q Consensus 77 ~~~~~~vlI~ga~g-~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~----~g~~~----~~~~~~~~~~~~~i~~~~- 146 (269)
+.++++++|+|++| ++|.++++.+...|++|+++++++++.+...+. ++... ..|..+..+....+.+..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44578999999986 899999999999999999999887766544322 34322 235544312333333221
Q ss_pred -CCCccEEEeCCCc
Q 024337 147 -PEGIDVYFENVGG 159 (269)
Q Consensus 147 -~~~~d~vid~~g~ 159 (269)
.+++|++|+++|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 1479999999983
No 204
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.73 E-value=0.00027 Score=56.74 Aligned_cols=81 Identities=19% Similarity=0.311 Sum_probs=55.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+ |.. . ..|..+..++.+.+.+.. -+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999889999999999887665443232 221 1 235554323333333321 1368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999984
No 205
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.73 E-value=0.00028 Score=56.57 Aligned_cols=80 Identities=14% Similarity=0.216 Sum_probs=54.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc----eeEecCChhhHHHHHHHHC--CCCccE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEADLNAALKRYF--PEGIDV 152 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~----~~~~~~~~~~~~~~i~~~~--~~~~d~ 152 (269)
++++++|+||+|++|..+++.+...|++|+.++++.+..+... ++... ...|..+..++...+.+.. -+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999999999999999999998877554444 33221 1234444312322232221 136899
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
++.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999984
No 206
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00033 Score=56.23 Aligned_cols=84 Identities=15% Similarity=0.167 Sum_probs=54.7
Q ss_pred cCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHHHHHc---CC-c-e--eEecCChhhHHHHHHHHC
Q 024337 76 SAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDK-VDLLKNKF---GF-D-E--AFNYKEEADLNAALKRYF 146 (269)
Q Consensus 76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~-~~~~~~~~---g~-~-~--~~~~~~~~~~~~~i~~~~ 146 (269)
.+..+++++|+||+|++|...++.+... |++|+++++++++ .+.+.+++ +. . . .+|..+..+..+.+++..
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 3567889999999999999999887777 4899999988765 43322122 32 1 1 244444313333333332
Q ss_pred C-CCccEEEeCCCc
Q 024337 147 P-EGIDVYFENVGG 159 (269)
Q Consensus 147 ~-~~~d~vid~~g~ 159 (269)
. +++|+++.++|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 2 479999988874
No 207
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00041 Score=55.86 Aligned_cols=79 Identities=23% Similarity=0.302 Sum_probs=56.6
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-C--c-eeEecCChhhHHHHHHHHC---CCCccEE
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-F--D-EAFNYKEEADLNAALKRYF---PEGIDVY 153 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-~--~-~~~~~~~~~~~~~~i~~~~---~~~~d~v 153 (269)
++++|+||+|++|...++.+...|++|++++++.++.+.+.+..+ . . ...|..+..++.+.+.+.. .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 579999999999999999999999999999999888776653443 1 1 2345555423333333321 3479999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
+.|+|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999984
No 208
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.71 E-value=0.00035 Score=58.20 Aligned_cols=80 Identities=15% Similarity=0.223 Sum_probs=55.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---c-e--eEecCChhhHHHHHHHH--CCCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---D-E--AFNYKEEADLNAALKRY--FPEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~---~-~--~~~~~~~~~~~~~i~~~--~~~~~ 150 (269)
++++++|+||+|++|..+++.+...|++|++++++.++.+.+.+++.. . . ..|..+..+....+.+. ..+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999998999999999998876655434421 1 1 23544431233333332 12369
Q ss_pred cEEEeCCC
Q 024337 151 DVYFENVG 158 (269)
Q Consensus 151 d~vid~~g 158 (269)
|++|+++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999988
No 209
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00027 Score=55.97 Aligned_cols=81 Identities=21% Similarity=0.282 Sum_probs=56.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC---ce--eEecCChhhHHHHHHHHC--CCCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF---DE--AFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~---~~--~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
++.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+.. .+ ..|..+..++.+.+++.. .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999988899999999988776655434431 11 234444323333343322 13699
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++|++.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99999874
No 210
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.70 E-value=0.00069 Score=50.70 Aligned_cols=98 Identities=21% Similarity=0.339 Sum_probs=69.3
Q ss_pred hcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCce--eEecCChhhHHHHHHHHCCC
Q 024337 75 CSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEADLNAALKRYFPE 148 (269)
Q Consensus 75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~--~~~~~~~~~~~~~i~~~~~~ 148 (269)
.++++++.++=.|+ |.|..+++++... ..+||+++++++..+..++ +||.+. ++..+. .+.+.+..
T Consensus 30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A----p~~L~~~~-- 101 (187)
T COG2242 30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA----PEALPDLP-- 101 (187)
T ss_pred hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc----hHhhcCCC--
Confidence 57899999999997 6688888888544 3499999999998776543 677653 333332 23333211
Q ss_pred CccEEEeCCCc---hhHhhhHhhhhcCCEEEEEec
Q 024337 149 GIDVYFENVGG---KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 149 ~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~ 180 (269)
.+|.+|=--|. ..++.++..|+++|++|.-..
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~nai 136 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAI 136 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence 58988855443 578899999999999986533
No 211
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00047 Score=54.10 Aligned_cols=78 Identities=19% Similarity=0.210 Sum_probs=56.1
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVYFENVGG 159 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 159 (269)
++++|+|++|++|..+++.+...|++|+.++++.+..+.++ ..+.. ...|..+.+++...+....++++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 47899999999999999988888999999999888777766 55543 23455554133332223333379999998874
No 212
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.0005 Score=54.60 Aligned_cols=81 Identities=16% Similarity=0.253 Sum_probs=55.4
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CC-c---eeEecCC---h--hhHHHHHHHHC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GF-D---EAFNYKE---E--ADLNAALKRYF 146 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~-~---~~~~~~~---~--~~~~~~i~~~~ 146 (269)
++++++|+|++|++|...++.+...|++|+++++++++.+.+.+++ +. . ..+|..+ . ..+.+.+.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999999988766543332 21 1 1233321 1 02233344434
Q ss_pred CCCccEEEeCCCc
Q 024337 147 PEGIDVYFENVGG 159 (269)
Q Consensus 147 ~~~~d~vid~~g~ 159 (269)
++++|.+|.++|.
T Consensus 85 ~~~id~vi~~ag~ 97 (239)
T PRK08703 85 QGKLDGIVHCAGY 97 (239)
T ss_pred CCCCCEEEEeccc
Confidence 3478999999983
No 213
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.00043 Score=55.64 Aligned_cols=80 Identities=23% Similarity=0.206 Sum_probs=55.6
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----c-eeEecCChhhHHHHHHHHCC--CCccE
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----D-EAFNYKEEADLNAALKRYFP--EGIDV 152 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~----~-~~~~~~~~~~~~~~i~~~~~--~~~d~ 152 (269)
+.+++|+|++|++|...++.+...|++|++++++.++.+.+.+.+.. . ...|..+..++.+.+.+... +.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 46899999999999999999999999999999988877665433321 1 12455443233333333221 36899
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
+++++|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9999873
No 214
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.70 E-value=0.00013 Score=58.53 Aligned_cols=110 Identities=20% Similarity=0.240 Sum_probs=77.6
Q ss_pred hhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHH
Q 024337 65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAA 141 (269)
Q Consensus 65 ~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~ 141 (269)
..+...+....+++||+++|=+|. |.|.+++..|+.+|++|++++-|+++.+.+++ +.|...-+...-. ++
T Consensus 58 ~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~-d~--- 131 (283)
T COG2230 58 RAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ-DY--- 131 (283)
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec-cc---
Confidence 445555667789999999999996 78999999999999999999999998887764 3344311100000 11
Q ss_pred HHHHCCCCccEEE-----eCCCc----hhHhhhHhhhhcCCEEEEEeccc
Q 024337 142 LKRYFPEGIDVYF-----ENVGG----KTLDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 142 i~~~~~~~~d~vi-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~~ 182 (269)
++. .+.||-|+ +.+|. .-+..+.+.|+++|++++.....
T Consensus 132 -rd~-~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 132 -RDF-EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred -ccc-ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 111 12478664 45564 35788999999999999887654
No 215
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.70 E-value=0.0012 Score=50.79 Aligned_cols=78 Identities=22% Similarity=0.266 Sum_probs=54.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC----Cce-eEecCChhhHHHHHHHHCCCCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG----FDE-AFNYKEEADLNAALKRYFPEGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g----~~~-~~~~~~~~~~~~~i~~~~~~~~d~v 153 (269)
++.+++|+|++|++|..++..+...|++|+++.|+.++.+.+.+.+. ... ..+..+..+..+.+. ++|+|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCEE
Confidence 57899999999999999999988889999999999887766553442 221 223332212233332 48999
Q ss_pred EeCCCchh
Q 024337 154 FENVGGKT 161 (269)
Q Consensus 154 id~~g~~~ 161 (269)
|.+++...
T Consensus 102 i~at~~g~ 109 (194)
T cd01078 102 FAAGAAGV 109 (194)
T ss_pred EECCCCCc
Confidence 99988533
No 216
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.69 E-value=0.00044 Score=52.37 Aligned_cols=89 Identities=22% Similarity=0.274 Sum_probs=64.7
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV 157 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 157 (269)
-.+.+|.|+|. |.+|..++++++.+|++|++.+++........ ..+.. +. ++.+.+.+ .|+|+.+.
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~~----~~---~l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGVE----YV---SLDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTEE----ES---SHHHHHHH------SEEEE-S
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcc-cccce----ee---ehhhhcch-----hhhhhhhh
Confidence 46899999998 99999999999999999999999877666343 44431 11 44555554 79999988
Q ss_pred Cc-h-----hHhhhHhhhhcCCEEEEEec
Q 024337 158 GG-K-----TLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 158 g~-~-----~~~~~~~~l~~~G~~v~~g~ 180 (269)
+. . .-...+..|+++..+|.++.
T Consensus 100 plt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred ccccccceeeeeeeeeccccceEEEeccc
Confidence 73 1 12467888998888888755
No 217
>PRK06484 short chain dehydrogenase; Validated
Probab=97.69 E-value=0.0003 Score=62.71 Aligned_cols=81 Identities=22% Similarity=0.323 Sum_probs=59.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d~v 153 (269)
++++++|+|+++++|..+++.+...|++|+.++++.++.+.+.++++.. ..+|..+..++.+.+.+... +++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999999999999999999999999999999988877665466643 23455554233333333221 379999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
++++|.
T Consensus 84 i~nag~ 89 (520)
T PRK06484 84 VNNAGV 89 (520)
T ss_pred EECCCc
Confidence 999873
No 218
>PRK06194 hypothetical protein; Provisional
Probab=97.69 E-value=0.00028 Score=57.71 Aligned_cols=80 Identities=19% Similarity=0.288 Sum_probs=54.0
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCcc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
+.++||+||+|++|..+++.+...|++|++++++.++.+...+++ +... ..|..+.+++.+.+.+.. .+++|
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999998876655443233 3221 234444312322232221 13689
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++++++|.
T Consensus 86 ~vi~~Ag~ 93 (287)
T PRK06194 86 LLFNNAGV 93 (287)
T ss_pred EEEECCCC
Confidence 99999984
No 219
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.69 E-value=0.00033 Score=56.41 Aligned_cols=82 Identities=16% Similarity=0.293 Sum_probs=62.3
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc---eeEecCChhhHHHHHHHHCCC-C
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD---EAFNYKEEADLNAALKRYFPE-G 149 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~i~~~~~~-~ 149 (269)
+.|++.+|.|||.|+|.+-+.=+..+|.+|+.+.|++++++.++++. +.. .++|..++....+.+++.+.+ .
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 34699999999999998766666669999999999999987665433 331 367887762336667776666 8
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+-+.++++|-
T Consensus 127 VgILVNNvG~ 136 (312)
T KOG1014|consen 127 VGILVNNVGM 136 (312)
T ss_pred eEEEEecccc
Confidence 8899999994
No 220
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.0003 Score=56.40 Aligned_cols=80 Identities=19% Similarity=0.252 Sum_probs=54.6
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-ee--EecCChhhHHHHHHHHCC--CCcc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-EA--FNYKEEADLNAALKRYFP--EGID 151 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~~i~~~~~--~~~d 151 (269)
+++++|.|+++++|...++.+...|++|++++++.++.+.+.+.+ +.. .. .|..+.+++...+.+... +++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999999999999999999999999999999887665544232 221 12 344443233333333221 3689
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++++++|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999873
No 221
>PRK05717 oxidoreductase; Validated
Probab=97.68 E-value=0.0004 Score=55.76 Aligned_cols=81 Identities=16% Similarity=0.235 Sum_probs=55.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d~v 153 (269)
.+++++|+|++|++|..++..+...|++|+.++++.++.+.+.+.++.. ...|..+..+....+.+... +++|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4679999999999999999999999999999988876655543244432 13444443123232333221 368999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
|.++|.
T Consensus 89 i~~ag~ 94 (255)
T PRK05717 89 VCNAAI 94 (255)
T ss_pred EECCCc
Confidence 999984
No 222
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.68 E-value=0.00033 Score=56.41 Aligned_cols=78 Identities=23% Similarity=0.276 Sum_probs=54.1
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce--eEecCChhhHHHHHHHHC--CCCccEEE
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEADLNAALKRYF--PEGIDVYF 154 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~i~~~~--~~~~d~vi 154 (269)
+++|+|+++++|..+++.+...|++|+.+++++++.+.+.+++ +... ..|..+.++..+.+.+.. -+++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899999999999999999999999999999987765544333 2112 234444323333333322 13799999
Q ss_pred eCCCc
Q 024337 155 ENVGG 159 (269)
Q Consensus 155 d~~g~ 159 (269)
+++|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99883
No 223
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.67 E-value=0.00047 Score=55.14 Aligned_cols=78 Identities=19% Similarity=0.333 Sum_probs=55.1
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--CCccEEEeC
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--EGIDVYFEN 156 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~~~d~vid~ 156 (269)
+++|.|++|++|...+..+...|++|+++++++++.+.+.+.++... ..|..+.+++.+.+.+... +++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 68999999999999999999999999999999887776653444321 2344443233333333221 369999998
Q ss_pred CCc
Q 024337 157 VGG 159 (269)
Q Consensus 157 ~g~ 159 (269)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 873
No 224
>PRK06128 oxidoreductase; Provisional
Probab=97.67 E-value=0.00071 Score=55.78 Aligned_cols=104 Identities=19% Similarity=0.249 Sum_probs=65.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHH----HHHHHcCCce---eEecCChhhHHHHHHHHC--C
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVD----LLKNKFGFDE---AFNYKEEADLNAALKRYF--P 147 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~--~~~----~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~ 147 (269)
.++++||+||++++|..+++.+...|++|+++.++.+ +.+ .++ ..+... ..|..+..+..+.+.+.. -
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999988875432 122 222 334321 234444312333333322 1
Q ss_pred CCccEEEeCCCc----h-----------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337 148 EGIDVYFENVGG----K-----------------------TLDAVLPNMKIRGRIAACGMISQ 183 (269)
Q Consensus 148 ~~~d~vid~~g~----~-----------------------~~~~~~~~l~~~G~~v~~g~~~~ 183 (269)
+++|++|+++|. . .++.+++.++++|+++.++....
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~ 195 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS 195 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence 369999999983 1 12334555567789998876543
No 225
>PLN02253 xanthoxin dehydrogenase
Probab=97.67 E-value=0.00046 Score=56.24 Aligned_cols=81 Identities=15% Similarity=0.177 Sum_probs=55.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--c---eeEecCChhhHHHHHHHHCC--CCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--D---EAFNYKEEADLNAALKRYFP--EGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~---~~~~~~~~~~~~~~i~~~~~--~~~d 151 (269)
.+++++|+||+|++|..+++.+...|++|++++++++..+.+.++++. . ...|..+..+..+.+.+... +++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999988999999999887765554434432 1 13455554233332332211 3699
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++++++|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999873
No 226
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00035 Score=55.27 Aligned_cols=81 Identities=12% Similarity=0.140 Sum_probs=53.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce-eEecCChhhHHHHHHHHCC--CCccE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE-AFNYKEEADLNAALKRYFP--EGIDV 152 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~ 152 (269)
+++++||+|++|++|..+++.+...|++|++++++.++.....+. .+... ..|..+.+++...+.+... +++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 378999999999999999999988999999999877653322112 22221 2344443133332332211 37999
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
+++++|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998873
No 227
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00034 Score=56.90 Aligned_cols=80 Identities=23% Similarity=0.315 Sum_probs=54.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++++++|+|++|++|..++..+...|++|+++++++++.+.+.+++ +... ..|..+..++.+.+.+.. -+++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999999999998877665443233 3221 234444313333332221 1368
Q ss_pred cEEEeCCC
Q 024337 151 DVYFENVG 158 (269)
Q Consensus 151 d~vid~~g 158 (269)
|++|+++|
T Consensus 85 d~li~nAg 92 (275)
T PRK05876 85 DVVFSNAG 92 (275)
T ss_pred CEEEECCC
Confidence 99999998
No 228
>PRK08589 short chain dehydrogenase; Validated
Probab=97.66 E-value=0.00036 Score=56.63 Aligned_cols=80 Identities=21% Similarity=0.245 Sum_probs=53.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++++++|+||++++|..+++.+...|++|++++++ ++.+.+.+++ +.. ...|..+..+....+.+.. -+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 47899999999999999999999999999999988 4443322133 221 2345555423333333322 1368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++++++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 229
>PRK09242 tropinone reductase; Provisional
Probab=97.65 E-value=0.00036 Score=56.08 Aligned_cols=81 Identities=22% Similarity=0.309 Sum_probs=55.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCce---eEecCChhhHHHHHHHHC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFDE---AFNYKEEADLNAALKRYF--PE 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~i~~~~--~~ 148 (269)
++++++|+|++|++|..+++.+...|++|++++++.++.+.+.+++ +... ..|..+..+....+.+.. -+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999888765544333 2111 234444312333233221 13
Q ss_pred CccEEEeCCCc
Q 024337 149 GIDVYFENVGG 159 (269)
Q Consensus 149 ~~d~vid~~g~ 159 (269)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999984
No 230
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.65 E-value=0.00046 Score=54.68 Aligned_cols=79 Identities=16% Similarity=0.190 Sum_probs=53.8
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHcCCce-eEecCChhhHHHHHHHHCC--CCccEEEe
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV-DLLKNKFGFDE-AFNYKEEADLNAALKRYFP--EGIDVYFE 155 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~--~~~d~vid 155 (269)
+++++|+|+++++|..+++.+...|++|+++++++++. +.++ ..+... ..|..+..+....+.+... +++|++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 46899999999999999999999999999999876543 3333 445422 2344443133333333322 36999999
Q ss_pred CCCc
Q 024337 156 NVGG 159 (269)
Q Consensus 156 ~~g~ 159 (269)
++|.
T Consensus 81 ~ag~ 84 (236)
T PRK06483 81 NASD 84 (236)
T ss_pred CCcc
Confidence 9873
No 231
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.65 E-value=0.00048 Score=55.32 Aligned_cols=81 Identities=17% Similarity=0.258 Sum_probs=56.7
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-e--eEecCChhhHHHHHHHHC--CCCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~d~v 153 (269)
.+++++|+|++|++|..+++.+...|++|+.++++.++.+.+.+.++.. . ..|..+..+....+.+.. -+++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3678999999999999999999999999999999988776665454432 1 234444313333333221 1368999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
+.++|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998873
No 232
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.64 E-value=0.00045 Score=56.17 Aligned_cols=104 Identities=12% Similarity=0.132 Sum_probs=69.3
Q ss_pred CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCc--eeEecCChhhHHHHHHHHCC--CC
Q 024337 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFD--EAFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~---~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
.+++++|+||+ +|+|.++++.+...|++|+.++++++ +.+.+.++++.. ...|..+.++....+.+... ++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899999996 79999999999999999999988753 333333244532 23455554233333333322 47
Q ss_pred ccEEEeCCCc-h-----------------------------hHhhhHhhhhcCCEEEEEeccc
Q 024337 150 IDVYFENVGG-K-----------------------------TLDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 150 ~d~vid~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 182 (269)
+|++++++|. . ..+..++.|.++|+++.++...
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 9999999983 1 0244566677789999887644
No 233
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00035 Score=57.79 Aligned_cols=80 Identities=21% Similarity=0.258 Sum_probs=54.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCc-e--eEecCChhhHHHHHHHHCC--C
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEADLNAALKRYFP--E 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~i~~~~~--~ 148 (269)
.+++++|+||+|++|..+++.+...|++|++++++.++.+.+.+++ +.. . ..|..+.++....+.+... +
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5689999999999999999999889999999999877654432222 111 1 2344443133333333321 3
Q ss_pred CccEEEeCCC
Q 024337 149 GIDVYFENVG 158 (269)
Q Consensus 149 ~~d~vid~~g 158 (269)
++|++|.++|
T Consensus 95 ~iD~li~nAg 104 (306)
T PRK06197 95 RIDLLINNAG 104 (306)
T ss_pred CCCEEEECCc
Confidence 6999999997
No 234
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00053 Score=55.31 Aligned_cols=81 Identities=23% Similarity=0.361 Sum_probs=55.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--c-e--eEecCChhhHHHHHHHHC-CCCccE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--D-E--AFNYKEEADLNAALKRYF-PEGIDV 152 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~-~--~~~~~~~~~~~~~i~~~~-~~~~d~ 152 (269)
++.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++.. . . ..|..+.++......... .+++|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 467899999999999999999999999999999998877666534311 1 1 234444312222222211 247899
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
++.++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999884
No 235
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00052 Score=55.05 Aligned_cols=75 Identities=19% Similarity=0.270 Sum_probs=53.2
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHCCCCccEE
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYFPEGIDVY 153 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~~~~~d~v 153 (269)
+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+ ..+.. ...|..+. + .+.+...+++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-I---DRAQAAEWDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-H---HHHHHhcCCCCEE
Confidence 4689999999999999999999999999999998776655442 22222 12354443 2 2333333479999
Q ss_pred EeCCC
Q 024337 154 FENVG 158 (269)
Q Consensus 154 id~~g 158 (269)
|+++|
T Consensus 78 i~~ag 82 (257)
T PRK09291 78 LNNAG 82 (257)
T ss_pred EECCC
Confidence 99988
No 236
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00047 Score=55.10 Aligned_cols=81 Identities=16% Similarity=0.191 Sum_probs=54.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
.+.+++|+|++|++|..+++.+...|++|++++++++..+.+.+.+ +.. ...|..+..+....+.+.. .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999999889999999999876654443222 211 1344444312222222221 1369
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999983
No 237
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00063 Score=54.72 Aligned_cols=79 Identities=23% Similarity=0.345 Sum_probs=55.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc-e--eEecCChhhHHHHHHHHCCCCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEADLNAALKRYFPEGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~-~--~~~~~~~~~~~~~i~~~~~~~~d 151 (269)
++++++|.|+++++|..+++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..+..+.+.+. +++|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence 4689999999999999999999999999999999888766544233 221 1 23444431333333322 4799
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
+++++.|.
T Consensus 84 ~lv~~ag~ 91 (259)
T PRK06125 84 ILVNNAGA 91 (259)
T ss_pred EEEECCCC
Confidence 99999874
No 238
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00043 Score=54.66 Aligned_cols=80 Identities=11% Similarity=0.150 Sum_probs=55.4
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHH---CCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRY---FPEG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~---~~~~ 149 (269)
++++++|.|+++++|.+.+..+...|++|+.+.+++++.+.+.+++ +.. . ..|..+.++..+.+.+. .+++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999999888766543222 332 1 23444431333233322 2226
Q ss_pred ccEEEeCCC
Q 024337 150 IDVYFENVG 158 (269)
Q Consensus 150 ~d~vid~~g 158 (269)
+|++++++|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999996
No 239
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00043 Score=55.44 Aligned_cols=80 Identities=19% Similarity=0.307 Sum_probs=54.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
++.+++|.||+|++|...++.+...|++|+.++++.++.+.+.+++ +.. . ..|..+..+....+.+... +++
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999999999999999877665544332 221 1 2344443123333333221 368
Q ss_pred cEEEeCCC
Q 024337 151 DVYFENVG 158 (269)
Q Consensus 151 d~vid~~g 158 (269)
|++++++|
T Consensus 87 d~li~~ag 94 (252)
T PRK07035 87 DILVNNAA 94 (252)
T ss_pred CEEEECCC
Confidence 99999987
No 240
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.61 E-value=0.00051 Score=54.82 Aligned_cols=80 Identities=18% Similarity=0.255 Sum_probs=53.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHcCCc---eeEecCChhhHHHHHHHHCC--CCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--VDLLKNKFGFD---EAFNYKEEADLNAALKRYFP--EGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~--~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~d 151 (269)
++++++|+||+|++|..+++.+...|++|+.+++++.. .+.++ +.+.. ...|..+..++...+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999999999999999999987531 22233 44432 12344443233333333221 3699
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++++++|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99999874
No 241
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.61 E-value=0.00046 Score=55.13 Aligned_cols=80 Identities=15% Similarity=0.278 Sum_probs=54.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
++++++|+|++|++|..+++.+...|++|+.+++++++.+.+.++ .+.. ...|..+.++..+.+..... +++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999999988765544322 2332 12343333123333333221 368
Q ss_pred cEEEeCCC
Q 024337 151 DVYFENVG 158 (269)
Q Consensus 151 d~vid~~g 158 (269)
|.+|+++|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999988
No 242
>PRK06720 hypothetical protein; Provisional
Probab=97.61 E-value=0.00058 Score=51.19 Aligned_cols=81 Identities=14% Similarity=0.247 Sum_probs=53.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++..++|.||++++|...+..+...|++|++++++.++.+...+++ +.. . ..|..+..++.+.+.+.. -+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999889999999998877654432232 332 1 234333212233222211 1378
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++++++|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 999998873
No 243
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00043 Score=55.45 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=54.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++++++|.|++|++|..+++.+...|++|+.+++++++.+.+.+ ..+.. . ..|..+..++...+.+.. -+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999999999876544332 22322 1 234444312223222221 1368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 244
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.61 E-value=0.0012 Score=53.23 Aligned_cols=98 Identities=21% Similarity=0.223 Sum_probs=74.4
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC--
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV-- 157 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~-- 157 (269)
..+|.|+|+ |-+|.-++++|-.+|++|...+.+.+|++.+.+.++..-..-+++...+.+.+. +.|++|.++
T Consensus 168 ~~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLI 241 (371)
T COG0686 168 PAKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLI 241 (371)
T ss_pred CccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEe
Confidence 345677788 999999999999999999999999999999987777652222333325555555 479998866
Q ss_pred -Cc----hhHhhhHhhhhcCCEEEEEecccc
Q 024337 158 -GG----KTLDAVLPNMKIRGRIAACGMISQ 183 (269)
Q Consensus 158 -g~----~~~~~~~~~l~~~G~~v~~g~~~~ 183 (269)
|. -..++.++.|+|++.++.+....+
T Consensus 242 pgakaPkLvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 242 PGAKAPKLVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred cCCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence 22 246778999999999999876544
No 245
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00058 Score=55.49 Aligned_cols=79 Identities=27% Similarity=0.325 Sum_probs=55.8
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEGIDVYFE 155 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~vid 155 (269)
.++||+||+|++|..+++.+...|.+|+++.+++++.+.+++..+.. ...|..+..++.+.+.+.. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999999999999999999889999999999988877665343322 1345444313333333322 136899999
Q ss_pred CCCc
Q 024337 156 NVGG 159 (269)
Q Consensus 156 ~~g~ 159 (269)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9874
No 246
>PRK08643 acetoin reductase; Validated
Probab=97.61 E-value=0.00042 Score=55.60 Aligned_cols=80 Identities=14% Similarity=0.164 Sum_probs=54.6
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
+++++|+|++|++|..+++.+...|++|+.++++.++.+.+...+ +.. ...|..+.....+.+.+.. -+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999999999999999887665544232 221 1234444312333333321 13699
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999974
No 247
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.60 E-value=0.00052 Score=55.19 Aligned_cols=81 Identities=21% Similarity=0.339 Sum_probs=55.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
++++++|+|++|++|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+..++...+.+... +++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999999999999999887765544222 221 13355443133222222211 368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|.++.++|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999873
No 248
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.60 E-value=0.00058 Score=55.46 Aligned_cols=80 Identities=13% Similarity=0.145 Sum_probs=53.5
Q ss_pred CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHcCCce--eEecCChhhHHHHHHHHCC--CC
Q 024337 79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKV---DLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~~~---~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
++++++|+||++ |+|.++++.+...|++|++++++++.. +.+.+++|... ..|..+..+....+.+... ++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 478999999986 999999999999999999998765322 23322445322 2355554233333333221 47
Q ss_pred ccEEEeCCC
Q 024337 150 IDVYFENVG 158 (269)
Q Consensus 150 ~d~vid~~g 158 (269)
+|++++++|
T Consensus 86 iD~lVnnAG 94 (271)
T PRK06505 86 LDFVVHAIG 94 (271)
T ss_pred CCEEEECCc
Confidence 999999998
No 249
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.00034 Score=56.69 Aligned_cols=78 Identities=19% Similarity=0.363 Sum_probs=54.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE 155 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid 155 (269)
.+++++|+||+|++|..+++.+...|++|++++++.++.+... +.. ...|..+..++.+.+.+.. -+++|++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3568999999999999999999999999999998876543322 222 2345555423444344332 136999999
Q ss_pred CCCc
Q 024337 156 NVGG 159 (269)
Q Consensus 156 ~~g~ 159 (269)
|+|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9984
No 250
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.00043 Score=55.32 Aligned_cols=81 Identities=15% Similarity=0.178 Sum_probs=55.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCc-e--eEecCChhhHHHHHHHHCC--CCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEADLNAALKRYFP--EGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~--g~~-~--~~~~~~~~~~~~~i~~~~~--~~~d 151 (269)
++.+++|.||+|++|..+++.+...|++|+.++++.++.+...+.+ +.. . ..|..+..+..+.+.+... +++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999999988888999999999887665544233 221 1 2344443123333332211 3799
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
+++.++|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999984
No 251
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.58 E-value=0.00051 Score=55.06 Aligned_cols=81 Identities=21% Similarity=0.349 Sum_probs=55.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
.++++||+||++++|..+++.+...|++|+.+++++++.+.+.+++ +.. . ..|..+..++...+.+.. -+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999999877665443233 221 1 234444312333332221 1369
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|+++.++|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999984
No 252
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.58 E-value=0.001 Score=53.92 Aligned_cols=153 Identities=18% Similarity=0.172 Sum_probs=92.9
Q ss_pred CCCCCCCeEEeccceeeEEEecCCceeecCCCCCCcchhhhhcCCcchhHHHHHHHh-hcCCCCCEEEEecCcchHHHHH
Q 024337 18 PEFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEV-CSAKHGECVFISAASGAVGQLV 96 (269)
Q Consensus 18 ~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~~~~a~~~l~~~-~~~~~~~~vlI~ga~g~vG~~~ 96 (269)
..++.|++.+...+|.+|..-.....++++|. +.| ..... .|...||... ..++++++++=+|. |.|.++
T Consensus 107 ~P~rig~~f~I~Psw~~~~~~~~~~~i~lDPG---lAF---GTG~H-pTT~lcL~~Le~~~~~g~~vlDvGc--GSGILa 177 (300)
T COG2264 107 HPVRIGERFVIVPSWREYPEPSDELNIELDPG---LAF---GTGTH-PTTSLCLEALEKLLKKGKTVLDVGC--GSGILA 177 (300)
T ss_pred CcEEeeeeEEECCCCccCCCCCCceEEEEccc---ccc---CCCCC-hhHHHHHHHHHHhhcCCCEEEEecC--ChhHHH
Confidence 44677888888888888754434566777443 443 12222 2333344333 23679999999996 567777
Q ss_pred HHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc----hhHhhhHhhhhc
Q 024337 97 GQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG----KTLDAVLPNMKI 171 (269)
Q Consensus 97 i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~----~~~~~~~~~l~~ 171 (269)
|..+| +|+ +|++++-.+...+.++++.-...+-..... ..........+++||+|+-+.=. .......+.+++
T Consensus 178 IAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~-~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkp 255 (300)
T COG2264 178 IAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLVQA-KGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKP 255 (300)
T ss_pred HHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhhhc-ccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCC
Confidence 77666 577 799999888877776643322111100000 00111111222489999877632 456778889999
Q ss_pred CCEEEEEecc
Q 024337 172 RGRIAACGMI 181 (269)
Q Consensus 172 ~G~~v~~g~~ 181 (269)
+|++++.|..
T Consensus 256 gg~lIlSGIl 265 (300)
T COG2264 256 GGRLILSGIL 265 (300)
T ss_pred CceEEEEeeh
Confidence 9999998874
No 253
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.00057 Score=54.53 Aligned_cols=79 Identities=19% Similarity=0.297 Sum_probs=54.4
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----CCc-e--eEecCChhhHHHHHHHHC--CCC
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF-----GFD-E--AFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~-----g~~-~--~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
+++++|+||+|++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+.+++.+.+.+.. -++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999889999999999988766543222 211 1 235554423333333322 136
Q ss_pred ccEEEeCCC
Q 024337 150 IDVYFENVG 158 (269)
Q Consensus 150 ~d~vid~~g 158 (269)
+|++|.++|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999997
No 254
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.57 E-value=0.00047 Score=55.30 Aligned_cols=81 Identities=19% Similarity=0.231 Sum_probs=55.8
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHcCC--ceeEecCChhhHHHHHHHHCC--CC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV----DLLKNKFGF--DEAFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~----~~~~~~~g~--~~~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
-.|+.|||+||++|+|.+.++=+..+|++++..+.+++.. +..+ +.|- .+..|.++.++.....++... |.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 3589999999999999999998888999888888665533 3344 3342 245666654344433333322 27
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|++++.+|-
T Consensus 115 V~ILVNNAGI 124 (300)
T KOG1201|consen 115 VDILVNNAGI 124 (300)
T ss_pred ceEEEecccc
Confidence 9999999984
No 255
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00063 Score=54.07 Aligned_cols=82 Identities=17% Similarity=0.238 Sum_probs=55.7
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
..+++++|.|++|++|..++..+...|.+|+++++++++.+.+.+.+ +.. . ..|..+..++...+.+... ++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35678999999999999999999999999999999887665544222 221 1 2344443133333333221 36
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|+++.++|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999984
No 256
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00078 Score=54.77 Aligned_cols=80 Identities=25% Similarity=0.255 Sum_probs=55.5
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-e--eEecCChhhHHHHHHHHC--CCCccEEE
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGIDVYF 154 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~d~vi 154 (269)
+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+.++.. . ..|..+..++...+.+.. -+++|.++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999888999999999988776665343321 1 234444313333333221 13689999
Q ss_pred eCCCc
Q 024337 155 ENVGG 159 (269)
Q Consensus 155 d~~g~ 159 (269)
.|+|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99984
No 257
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00056 Score=55.72 Aligned_cols=79 Identities=15% Similarity=0.266 Sum_probs=54.5
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---e--eEecCChhhHHHHHHHHC--CCC
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---E--AFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~--~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
+++++|+||+|++|...++.+...|++|++++++.++.+.+.+. .+.+ . ..|..+.+++.. +.+.. -++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~ 81 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR 81 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence 56899999999999999999999999999999988766554322 2211 1 235555423333 43332 137
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|+++.|+|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999874
No 258
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.55 E-value=0.00049 Score=55.69 Aligned_cols=82 Identities=18% Similarity=0.338 Sum_probs=57.8
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc------eeEecCChhhH---HHHHHHH
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD------EAFNYKEEADL---NAALKRY 145 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~------~~~~~~~~~~~---~~~i~~~ 145 (269)
-.++.++|+|++.|+|.+++..+...|++|+.+.+++++.+...+.+ +.. ...|..+.++. .+...+.
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999876554332 221 23344433122 2222333
Q ss_pred CCCCccEEEeCCCc
Q 024337 146 FPEGIDVYFENVGG 159 (269)
Q Consensus 146 ~~~~~d~vid~~g~ 159 (269)
..+++|++++++|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 34589999999984
No 259
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.55 E-value=0.00074 Score=54.13 Aligned_cols=80 Identities=16% Similarity=0.247 Sum_probs=53.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--VDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~--~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
++++++|+||++++|.++++.+...|++|+++.+++.. .+.++ +.+.. ...|..+.++..+.+.+.. -+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999999999999999998875432 22333 44432 1345555423333333322 13799
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++++++|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99999883
No 260
>PRK07985 oxidoreductase; Provisional
Probab=97.54 E-value=0.0012 Score=54.33 Aligned_cols=105 Identities=12% Similarity=0.113 Sum_probs=66.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PE 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~--~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~--~~ 148 (269)
++++++|+||++++|..+++.+...|++|+++.++. ++.+.+.+ ..+.. ...|..+..+....+.+.. -+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 567999999999999999999999999999887542 23333321 22322 1234444313333333322 13
Q ss_pred CccEEEeCCCch---------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337 149 GIDVYFENVGGK---------------------------TLDAVLPNMKIRGRIAACGMISQ 183 (269)
Q Consensus 149 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 183 (269)
++|+++.++|.. .++.+++.++.+|+++.++....
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~ 189 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence 789999988731 02345555667789998876543
No 261
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.54 E-value=0.0007 Score=54.46 Aligned_cols=79 Identities=25% Similarity=0.249 Sum_probs=53.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++++++|+||+|++|..+++.+...|++|+++++++...+... ++ +.. ...|..+.++..+.+.+.. -+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999998754322222 32 322 1345555313333333322 1369
Q ss_pred cEEEeCCC
Q 024337 151 DVYFENVG 158 (269)
Q Consensus 151 d~vid~~g 158 (269)
|+++.++|
T Consensus 86 d~lv~nAg 93 (260)
T PRK12823 86 DVLINNVG 93 (260)
T ss_pred eEEEECCc
Confidence 99999997
No 262
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00084 Score=54.55 Aligned_cols=80 Identities=11% Similarity=0.102 Sum_probs=54.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----Cc-ee--EecCChhhHHHHHHHHCC--C
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-----FD-EA--FNYKEEADLNAALKRYFP--E 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-----~~-~~--~~~~~~~~~~~~i~~~~~--~ 148 (269)
++++++|+|++|++|..+++.+...|++|+.+++++++.+...+++. .. .. .|..+..+....+.+... +
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999999999999998776544332321 11 12 244443133333333221 3
Q ss_pred CccEEEeCCC
Q 024337 149 GIDVYFENVG 158 (269)
Q Consensus 149 ~~d~vid~~g 158 (269)
++|++|.++|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 263
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.54 E-value=0.00069 Score=55.04 Aligned_cols=82 Identities=13% Similarity=0.192 Sum_probs=54.4
Q ss_pred CCCCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCC--
Q 024337 77 AKHGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK---DKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFP-- 147 (269)
Q Consensus 77 ~~~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~---~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~-- 147 (269)
+-.+++++|+||+ +++|.++++.+...|++|+.+.+++ ++.+.+.++++.. ...|..+.++..+.+.+...
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 3457899999996 7999999999999999999888764 3344443344532 23454443233333333221
Q ss_pred CCccEEEeCCC
Q 024337 148 EGIDVYFENVG 158 (269)
Q Consensus 148 ~~~d~vid~~g 158 (269)
+++|++++++|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 37999999987
No 264
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.53 E-value=0.00059 Score=54.73 Aligned_cols=80 Identities=13% Similarity=0.086 Sum_probs=53.2
Q ss_pred CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc----eeEecCChhhHHHHHHHHCC--CCc
Q 024337 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD----EAFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~----~~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
.+++++|+||+ +++|.++++.+...|++|+.++++++..+.++ ++... ...|..+.++..+.+.+... +++
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999998 79999999999999999999988744333333 33221 12454443233333333221 479
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++++++|.
T Consensus 85 D~lv~nAg~ 93 (252)
T PRK06079 85 DGIVHAIAY 93 (252)
T ss_pred CEEEEcccc
Confidence 999999873
No 265
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00072 Score=54.48 Aligned_cols=80 Identities=20% Similarity=0.307 Sum_probs=53.6
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHCC--CCcc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFP--EGID 151 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~d 151 (269)
+.+++|.||+|++|..+++.+...|++|+++++++++.+.+.+.+ +.. ...|..+...+...+.+... +++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999999999999999999999999999999877655433222 322 12344443133333333211 3689
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
+++.|+|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 266
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00096 Score=53.55 Aligned_cols=80 Identities=21% Similarity=0.266 Sum_probs=55.1
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc--e--eEecCChhhHHHHHHHHC--CCCccEE
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEADLNAALKRYF--PEGIDVY 153 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~--~--~~~~~~~~~~~~~i~~~~--~~~~d~v 153 (269)
+++++|+||+|++|..++..+...|++|++++++.++.+.+.+.+... + ..|..+.+++...+.+.. -+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 568999999999999999999889999999999888766554343211 1 234444322333333321 1368999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999974
No 267
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.0016 Score=53.51 Aligned_cols=106 Identities=19% Similarity=0.222 Sum_probs=65.7
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---HcCCce---eEecCChhhHHHHHHHHC--CC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKN---KFGFDE---AFNYKEEADLNAALKRYF--PE 148 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~--~~ 148 (269)
-++.+++|+||+|++|..++..+...|++|+++.++.++ .+.+.+ ..+... ..|..+.+.+.+.+.+.. -+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999998899999999876432 222221 223221 234444312333333221 13
Q ss_pred CccEEEeCCCch----h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337 149 GIDVYFENVGGK----T-----------------------LDAVLPNMKIRGRIAACGMISQ 183 (269)
Q Consensus 149 ~~d~vid~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 183 (269)
++|++|.++|.. . .+.+++.+++.|++|.++....
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~ 185 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG 185 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 689999988741 0 1233445566789998876443
No 268
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.0016 Score=52.06 Aligned_cols=105 Identities=16% Similarity=0.210 Sum_probs=64.7
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHc---CCce---eEecCChhh---HHHHHHHH---
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKNKF---GFDE---AFNYKEEAD---LNAALKRY--- 145 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~~~---g~~~---~~~~~~~~~---~~~~i~~~--- 145 (269)
.+++++|+|+++++|..+++.+...|++|+++. +++++.+.+.+++ +... ..|..+..+ +.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 468999999999999999999999999998875 4545443322122 2211 123333211 22222221
Q ss_pred -CC-CCccEEEeCCCch---h-----------------------HhhhHhhhhcCCEEEEEecccc
Q 024337 146 -FP-EGIDVYFENVGGK---T-----------------------LDAVLPNMKIRGRIAACGMISQ 183 (269)
Q Consensus 146 -~~-~~~d~vid~~g~~---~-----------------------~~~~~~~l~~~G~~v~~g~~~~ 183 (269)
.+ +++|++++++|.. . .+.+++.++..|+++.++....
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 12 2799999999831 0 1235556667799998877554
No 269
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.52 E-value=0.0041 Score=49.47 Aligned_cols=174 Identities=18% Similarity=0.185 Sum_probs=98.4
Q ss_pred cCc--chHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHcCCce-eEecCChhh---HHHHHHHHCCCCccEEEeC
Q 024337 87 AAS--GAVGQLVGQFAKLLGCYVVGSAGSKDK----VDLLKNKFGFDE-AFNYKEEAD---LNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 87 ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~~----~~~~~~~~g~~~-~~~~~~~~~---~~~~i~~~~~~~~d~vid~ 156 (269)
|++ +++|.++++.+...|++|++++++.++ .+.+.++.+... ..|..+..+ +.+.+.+..++++|+++++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 455 899999999999999999999999887 344443566442 234444312 2233333343689999988
Q ss_pred CCc--h-----h-----------------------HhhhHhhhhcCCEEEEEeccccccCCCCCCccc------------
Q 024337 157 VGG--K-----T-----------------------LDAVLPNMKIRGRIAACGMISQYNLDKPEGVHN------------ 194 (269)
Q Consensus 157 ~g~--~-----~-----------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~------------ 194 (269)
+|. . . .+.+.+.++++|+++.++...............
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~ 160 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRS 160 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHH
Confidence 763 1 0 245666788899999987654321111110000
Q ss_pred -hHHHhh-cceeeeeeeecccccchHHHH---HHHHHHHHCCCeeeeeehccccccHHHHHHHHhcCC---CcceEE
Q 024337 195 -LMYLVS-KRLRMEGFIVLDHYHLYPKFL---EMIIPHIKEGKLVYVEDMAEGLESAPAALIGLFSGQ---NVGKQV 263 (269)
Q Consensus 195 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~---~~gkvv 263 (269)
-.++-. +++++.....+.......+.+ ++..+.+.+ ..+..+....+|+.++...|.+.. ..|.++
T Consensus 161 lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~---~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i 234 (241)
T PF13561_consen 161 LAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKK---RIPLGRLGTPEEVANAVLFLASDAASYITGQVI 234 (241)
T ss_dssp HHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHH---HSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEE
T ss_pred HHHHhccccCeeeeeecccceeccchhccccccchhhhhhh---hhccCCCcCHHHHHHHHHHHhCccccCccCCeE
Confidence 012334 577777666554432222222 222222222 122223346778889988887643 445443
No 270
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.51 E-value=0.001 Score=52.85 Aligned_cols=80 Identities=20% Similarity=0.320 Sum_probs=54.6
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCce-e--EecCChhhHHHHHHHHCC--CCcc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDE-A--FNYKEEADLNAALKRYFP--EGID 151 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~i~~~~~--~~~d 151 (269)
+.+++|+|++|++|...++.+...|.+|+++.+++++.+...+. .+... . .|..+..++.+.+.+... +++|
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD 84 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 57899999999999999999999999999999988775544322 23221 1 344443233333333211 3689
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
.++.++|.
T Consensus 85 ~vi~~ag~ 92 (246)
T PRK05653 85 ILVNNAGI 92 (246)
T ss_pred EEEECCCc
Confidence 99999874
No 271
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.50 E-value=0.0007 Score=55.08 Aligned_cols=80 Identities=15% Similarity=0.250 Sum_probs=54.7
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
++++++|+||+|++|..+++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..+....+.+... +++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999999999877665443232 221 1 2344443123333332221 379
Q ss_pred cEEEeCCC
Q 024337 151 DVYFENVG 158 (269)
Q Consensus 151 d~vid~~g 158 (269)
|++|.++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999988
No 272
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00069 Score=54.44 Aligned_cols=80 Identities=14% Similarity=0.152 Sum_probs=54.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++.+++|+||+|++|..+++.+...|++|+++++++++.+..+ ++ +.. ...|..+.++....+.+.. -+++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAE-ELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHH-HHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999999999999999999999999999998877654433 32 322 1334444323333333322 1379
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999983
No 273
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.50 E-value=0.0026 Score=49.32 Aligned_cols=104 Identities=16% Similarity=0.208 Sum_probs=75.0
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCceeEe-cCChhhHHHHHHHHC
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNK---FGFDEAFN-YKEEADLNAALKRYF 146 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~---~g~~~~~~-~~~~~~~~~~i~~~~ 146 (269)
..++.+..++||=.| +++|+.++.+|..+. .+++.+.+++++.+.+++. .|.+..+. .... +..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence 456778889999888 688999999999886 4899999999998887753 45544221 1112 4455555533
Q ss_pred CCCccEEE-eCCCc---hhHhhhHhhhhcCCEEEEEe
Q 024337 147 PEGIDVYF-ENVGG---KTLDAVLPNMKIRGRIAACG 179 (269)
Q Consensus 147 ~~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~g 179 (269)
.+.||+|| |+.-. ..++.++++|++||.++.=.
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN 166 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN 166 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence 45899774 55544 67899999999999887643
No 274
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.50 E-value=0.0014 Score=55.17 Aligned_cols=94 Identities=17% Similarity=0.150 Sum_probs=68.2
Q ss_pred CEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcC---Cc-eeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFG---FD-EAFNYKEEADLNAALKRYFPEGIDVYFE 155 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g---~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid 155 (269)
.+|||.|+ |++|..+++.+.+.| .+|++.+|+.++.+.+. ... .. ..+|..+.....+.++ ++|+||+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~-----~~d~VIn 74 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIK-----DFDLVIN 74 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHh-----cCCEEEE
Confidence 57899999 999999999988888 69999999999988887 443 22 3556554313333333 3699999
Q ss_pred CCCc-hhHhhhHhhhhcCCEEEEEecc
Q 024337 156 NVGG-KTLDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 156 ~~g~-~~~~~~~~~l~~~G~~v~~g~~ 181 (269)
|.+. ..+..+-.+++.+=.++.....
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts~~ 101 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTSYY 101 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEcccC
Confidence 9997 4554455666777778777653
No 275
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.50 E-value=0.00093 Score=55.50 Aligned_cols=80 Identities=14% Similarity=0.164 Sum_probs=55.6
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCc----e--eEecCChhhHHHHHHHHC--CCCc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFD----E--AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~----~--~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
+++++|+|+++++|..+++.+...| ++|+.+++++++.+.+.++++.. . ..|..+..+....+.+.. .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 6789999999999999999988899 89999999988776554354321 1 235544312333333321 2379
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|+++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999873
No 276
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.50 E-value=0.00073 Score=53.62 Aligned_cols=81 Identities=19% Similarity=0.272 Sum_probs=54.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
.+.+++|.|++|++|..++..+...|++|+++++++++.+...+++ +.. . ..|..+..++.+.+++.. -+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3578999999999999999999889999999999877654432222 221 1 233433313333333322 1368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999874
No 277
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0011 Score=53.07 Aligned_cols=74 Identities=26% Similarity=0.363 Sum_probs=50.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFE 155 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid 155 (269)
.+++++|+||+|++|..+++.+...|++|+++++++. ..+... . +... ..|..+. + .+.+.. +++|++++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~-~~~~~~~~D~~~~-~---~~~~~~-~~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-E-SPNEWIKWECGKE-E---SLDKQL-ASLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-c-CCCeEEEeeCCCH-H---HHHHhc-CCCCEEEE
Confidence 3689999999999999999999999999999998762 222211 1 1111 2344433 2 222322 36999999
Q ss_pred CCCc
Q 024337 156 NVGG 159 (269)
Q Consensus 156 ~~g~ 159 (269)
++|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9974
No 278
>PRK04148 hypothetical protein; Provisional
Probab=97.50 E-value=0.0017 Score=46.14 Aligned_cols=90 Identities=14% Similarity=0.094 Sum_probs=58.3
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec-CChhhHHHHHHHHCCCCccEEEeC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY-KEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
.++.++++.|. | .|...++.++..|.+|++++.+++..+.++ +.+.+.+.+. -++ ++ .+- +++|+++.+
T Consensus 15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDlf~p-~~--~~y----~~a~liysi 84 (134)
T PRK04148 15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDLFNP-NL--EIY----KNAKLIYSI 84 (134)
T ss_pred ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcCCCC-CH--HHH----hcCCEEEEe
Confidence 45688999997 5 887667777788999999999999999888 7776543321 111 11 111 258888888
Q ss_pred CCchhHh-hhHhhhhc-CCEEEE
Q 024337 157 VGGKTLD-AVLPNMKI-RGRIAA 177 (269)
Q Consensus 157 ~g~~~~~-~~~~~l~~-~G~~v~ 177 (269)
-....++ ..+++-++ +..++.
T Consensus 85 rpp~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 85 RPPRDLQPFILELAKKINVPLII 107 (134)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEE
Confidence 8874444 33443333 344444
No 279
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.49 E-value=0.00099 Score=53.73 Aligned_cols=80 Identities=14% Similarity=0.204 Sum_probs=52.7
Q ss_pred CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCce--eEecCChhhHHHHHHHHCC--CC
Q 024337 79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~---~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
.+++++|+||++ |+|.++++.+...|++|+.+++++. ..+.+.++.+... ..|..+..+....+.+... ++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568999999986 8999999999889999999887642 2233332334322 3455554233333333322 37
Q ss_pred ccEEEeCCC
Q 024337 150 IDVYFENVG 158 (269)
Q Consensus 150 ~d~vid~~g 158 (269)
+|++++++|
T Consensus 87 iDilVnnag 95 (260)
T PRK06603 87 FDFLLHGMA 95 (260)
T ss_pred ccEEEEccc
Confidence 999999887
No 280
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.49 E-value=0.0011 Score=53.18 Aligned_cols=81 Identities=19% Similarity=0.271 Sum_probs=55.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++++++|+|++|++|...++.+...|.+|+++++++++.+.+.+.+ +.. ...|..+..++.+.+.+.. .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3579999999999999999999889999999999887665443232 322 1234444323333333221 1369
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|.++|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999999873
No 281
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0017 Score=51.60 Aligned_cols=77 Identities=21% Similarity=0.289 Sum_probs=52.4
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-Cc-eeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG-FD-EAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g-~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.+++|+||+|++|...+..+...|++|+++++++++.+.+.+... .. ...|..+..++.+.+.+. ....|.++.++|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQL-PFIPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhc-ccCCCEEEEcCc
Confidence 579999999999999999888899999999999887776652221 11 234555542333333332 224677776665
No 282
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0032 Score=50.39 Aligned_cols=81 Identities=16% Similarity=0.219 Sum_probs=52.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHH---C--
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRY---F-- 146 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~---~-- 146 (269)
.+.+++|+|++|++|..+++.+...|++|++. .++.++.+...+.+ +.. ...|..+.+++...+++. .
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 35789999999999999999998899988774 67766554332232 221 123554432333333332 1
Q ss_pred --C-CCccEEEeCCCc
Q 024337 147 --P-EGIDVYFENVGG 159 (269)
Q Consensus 147 --~-~~~d~vid~~g~ 159 (269)
+ +++|++|.++|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 1 268999999974
No 283
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.47 E-value=0.0008 Score=54.02 Aligned_cols=81 Identities=22% Similarity=0.338 Sum_probs=55.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
.+++++|.|+++++|..++..+...|++|+.++++.++.+.+.+. .+.. . ..|..+.++..+.+.+.. -+++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999999887766544322 2322 1 245554423333333321 1368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|+++.++|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999873
No 284
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.46 E-value=0.001 Score=53.37 Aligned_cols=81 Identities=19% Similarity=0.275 Sum_probs=55.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
++.+++|.|+++++|..+++.+...|++|+.+++++++.+.+.++ .+.. ...|..+.+++...+.+... +++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999999988999999999987765443322 2321 12344443233333333221 368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|.++.++|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999884
No 285
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0011 Score=53.26 Aligned_cols=81 Identities=21% Similarity=0.182 Sum_probs=52.7
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHC--CCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
++++++|+|+++++|..+++.+...|++|++++++++ ..+.+.+ ..+.. . ..|..+..+..+.+.+.. -++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999999999999999999999999997653 2222211 22322 1 234444313333333322 147
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|++|++.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 286
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.45 E-value=0.0014 Score=52.15 Aligned_cols=81 Identities=21% Similarity=0.337 Sum_probs=55.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce---eEecCChhhHHHHHHHHC--CCCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE---AFNYKEEADLNAALKRYF--PEGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~v 153 (269)
++.+++|.||+|++|..+++.+...|+.|+...++.++.+.+...++... ..|..+.+++...+.+.. -+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46799999999999999999999999999988888777665543444321 234443312222222221 1379999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
|.++|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999983
No 287
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.44 E-value=0.0019 Score=52.63 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=63.2
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
..+.+++|+|+ |++|.+++..+...| .+|+++.|+.++.+.+.+.++....+.. .. +..+.+ .++|+|++|
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhcc-----ccCCEEEEC
Confidence 35678999998 999999999999999 5999999999887766545542210111 10 111111 258999999
Q ss_pred CCchhH------hhhHhhhhcCCEEEEEec
Q 024337 157 VGGKTL------DAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 157 ~g~~~~------~~~~~~l~~~G~~v~~g~ 180 (269)
++.... ......++++..++.+..
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence 985221 223456777777776644
No 288
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.0025 Score=50.66 Aligned_cols=104 Identities=17% Similarity=0.136 Sum_probs=63.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHC--CCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
++.+++|+|++|++|...++.+...|++|+.+.++.+ ..+.+.+ ..+.. . ..|..+..+..+.+++.. -++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999888776433 2222211 22321 1 234444313333333321 136
Q ss_pred ccEEEeCCCchh--------------------------HhhhHhhhhcCCEEEEEeccc
Q 024337 150 IDVYFENVGGKT--------------------------LDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 150 ~d~vid~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~~~ 182 (269)
+|++|.++|... ++.+++.++.+|+++.++...
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 142 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV 142 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence 899999988310 223444555678999887543
No 289
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.44 E-value=0.002 Score=55.29 Aligned_cols=74 Identities=19% Similarity=0.225 Sum_probs=54.8
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
-.+.+++|.|+ |++|.+++..+...|+ +++++.|+.++.+.+.++++...++.++ +..+.+. .+|+||+|
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADIIIAA 249 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEEEEC
Confidence 46789999998 9999999999999997 8999999988877766566522233221 2222222 48999999
Q ss_pred CCch
Q 024337 157 VGGK 160 (269)
Q Consensus 157 ~g~~ 160 (269)
++..
T Consensus 250 T~a~ 253 (414)
T PRK13940 250 VNVL 253 (414)
T ss_pred cCCC
Confidence 9973
No 290
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.00069 Score=54.29 Aligned_cols=78 Identities=17% Similarity=0.260 Sum_probs=52.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE 155 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid 155 (269)
.+++++|+||+|++|..+++.+...|++|++++++.++ ... ..... ...|..+.++..+.+.+.. -+++|++|.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVD-GRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhc-CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47899999999999999999999999999999988654 111 11121 1345444323333333321 136899999
Q ss_pred CCCc
Q 024337 156 NVGG 159 (269)
Q Consensus 156 ~~g~ 159 (269)
++|.
T Consensus 82 ~ag~ 85 (252)
T PRK07856 82 NAGG 85 (252)
T ss_pred CCCC
Confidence 9873
No 291
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.00084 Score=54.97 Aligned_cols=82 Identities=17% Similarity=0.191 Sum_probs=53.8
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHHc---CCce---eEecCChhhHHHHH
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK---------DKVDLLKNKF---GFDE---AFNYKEEADLNAAL 142 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~---------~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i 142 (269)
-++++++|+||++++|..+++.+...|++|++++++. ++.+.+.+++ +... ..|..+.++..+.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3578999999999999999999999999999987654 4333332232 3221 23444432333333
Q ss_pred HHHC--CCCccEEEeCCCc
Q 024337 143 KRYF--PEGIDVYFENVGG 159 (269)
Q Consensus 143 ~~~~--~~~~d~vid~~g~ 159 (269)
.+.. -+++|++++++|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 3322 1479999999984
No 292
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.44 E-value=0.00099 Score=53.57 Aligned_cols=81 Identities=19% Similarity=0.276 Sum_probs=54.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++.++||+|++|++|..+++.+...|++|+++++++++.+.+.+ +.+... ..|..+.....+.+.+.. -+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999998866544332 233321 124444312222222221 1368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|+++.|+|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999974
No 293
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.44 E-value=0.00084 Score=53.98 Aligned_cols=80 Identities=15% Similarity=0.199 Sum_probs=52.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
.++++||+||++++|..+++.+...|++|++++++ ++.+.+.+ +.+.. ...|..+..+....+.+.. -+++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999877 33332221 33322 1345444312222333221 1368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|+++.+.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999999874
No 294
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.43 E-value=0.0013 Score=52.98 Aligned_cols=104 Identities=13% Similarity=0.148 Sum_probs=66.6
Q ss_pred CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHcCCce--eEecCChhhHHHHHHHHCC--CC
Q 024337 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDK---VDLLKNKFGFDE--AFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~~~---~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
++++++|+||+ +++|.++++.+...|++|++++++++. .+.+.++++... ..|..+.++..+.+.+... ++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 47899999997 499999999999999999999887543 233332444322 2344443233333333221 47
Q ss_pred ccEEEeCCCch---------------h---------------HhhhHhhhhcCCEEEEEeccc
Q 024337 150 IDVYFENVGGK---------------T---------------LDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 150 ~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~ 182 (269)
+|++++++|.. . .+.++..|+.+|+++.++...
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 99999998731 0 244556666678888876543
No 295
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.43 E-value=0.001 Score=53.55 Aligned_cols=81 Identities=15% Similarity=0.224 Sum_probs=53.8
Q ss_pred CCCEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCC
Q 024337 79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSK--DKVDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 79 ~~~~vlI~ga--~g~vG~~~i~~a~~~G~~V~~~~~s~--~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
.+++++|+|+ ++++|.++++.+...|++|+.++++. +..+.+.++++.. ...|..+.++..+.+.+.. -++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999 89999999999999999999998653 3344443344431 2345544423333333322 147
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|++++++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999999873
No 296
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.41 E-value=0.0015 Score=52.40 Aligned_cols=80 Identities=15% Similarity=0.174 Sum_probs=53.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHcCCce-eEecCChhhHHHHHHHHC--CCCccEEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKNKFGFDE-AFNYKEEADLNAALKRYF--PEGIDVYF 154 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~--~~~~d~vi 154 (269)
.+++++|+||+|++|..+++.+...|++|+++.++. +..+.++ ..+... ..|..+..+..+.+.+.. -+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999999999998876543 3344444 333322 345555423333333322 13699999
Q ss_pred eCCCc
Q 024337 155 ENVGG 159 (269)
Q Consensus 155 d~~g~ 159 (269)
.|+|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99874
No 297
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.40 E-value=0.0011 Score=52.83 Aligned_cols=81 Identities=17% Similarity=0.206 Sum_probs=53.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
.+.+++|+||+|++|...+..+...|++|++++++.++.....+ +.+.. . ..|..+.+++.+.+.+.. -+++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 46789999999999999999998899999999998665443321 22221 1 224444313333333221 1368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|.++.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999999864
No 298
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.40 E-value=0.00075 Score=50.28 Aligned_cols=79 Identities=18% Similarity=0.275 Sum_probs=51.7
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHHHHH---cCCc-e--eEecCChhhHHHHHHHHC--CCC
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS--KDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s--~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
++++|+||++++|...++.+-..|. +|+.+.++ .++.+.+.++ .+.. . ..|..+..+....+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4789999999999999999988877 88888888 4544444223 3432 1 234444323333333332 237
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|++|.|.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999985
No 299
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.40 E-value=0.0013 Score=53.11 Aligned_cols=81 Identities=20% Similarity=0.249 Sum_probs=55.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
.+.+++|+|+++++|..++..+...|++|+++.+++++.+.+.+.+ +.. ...|..+..+..+.+.+... +++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999999999899999999998887665443232 332 13444443122332332211 368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|.++.++|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999984
No 300
>PRK06398 aldose dehydrogenase; Validated
Probab=97.40 E-value=0.00041 Score=55.87 Aligned_cols=76 Identities=13% Similarity=0.136 Sum_probs=51.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHC--CCCccEEEeC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYF--PEGIDVYFEN 156 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~--~~~~d~vid~ 156 (269)
++++++|+|+++++|..++..+...|++|+++++++++...+. ....|..+..+..+.+.+.. -+++|+++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4689999999999999999999999999999998754322110 11335554323333333322 1369999999
Q ss_pred CCc
Q 024337 157 VGG 159 (269)
Q Consensus 157 ~g~ 159 (269)
+|.
T Consensus 80 Ag~ 82 (258)
T PRK06398 80 AGI 82 (258)
T ss_pred CCC
Confidence 873
No 301
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.40 E-value=0.0027 Score=52.58 Aligned_cols=100 Identities=19% Similarity=0.235 Sum_probs=69.6
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCC
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFP 147 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~ 147 (269)
+...++++++||..|+ |.|..++.+++..+. +|++++.+++..+.+++ ..|.+.+..... +..+.+.. .
T Consensus 74 ~~L~i~~g~~VLDIG~--GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g--D~~~~~~~--~ 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG--DGYYGVPE--F 147 (322)
T ss_pred HhcCCCCCCEEEEEeC--CccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--Chhhcccc--c
Confidence 3456889999999997 469999999998764 79999999987766653 345543322222 22222211 1
Q ss_pred CCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337 148 EGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 148 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 178 (269)
+.||+|+.+.+. .......+.|+++|+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 369999998885 4455678899999998764
No 302
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.40 E-value=0.001 Score=53.63 Aligned_cols=81 Identities=9% Similarity=0.163 Sum_probs=51.8
Q ss_pred CCCEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHcCCc--eeEecCChhhHHHHHHHHCC--CC
Q 024337 79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK---NKFGFD--EAFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 79 ~~~~vlI~ga--~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~---~~~g~~--~~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
++++++|+|| ++++|.++++.+...|++|+.+.+.+...+.++ ++.+.. ...|..+.++..+.+.+... ++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999996 679999999999999999998876543222232 122322 23455544233333333221 37
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|++++++|.
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999999974
No 303
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.40 E-value=0.00065 Score=52.99 Aligned_cols=98 Identities=16% Similarity=0.178 Sum_probs=67.8
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCce--eEecCChhhHHHHHHHH
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEADLNAALKRY 145 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~i~~~ 145 (269)
....++++++||-.|+ |.|..+..+++..+ .+|++++.+++..+.+++.+ |... ++..+. .... .
T Consensus 70 ~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~----~~~~--~ 141 (212)
T PRK13942 70 ELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG----TLGY--E 141 (212)
T ss_pred HHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc----ccCC--C
Confidence 4567899999999995 77888888888875 59999999999887776443 3322 222221 1000 0
Q ss_pred CCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337 146 FPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 146 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 178 (269)
..++||.|+-.... .......+.|+++|+++..
T Consensus 142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 12379998765543 5557788899999998875
No 304
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0015 Score=52.69 Aligned_cols=81 Identities=21% Similarity=0.251 Sum_probs=53.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HcCCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN--KFGFD---EAFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~--~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
++.+++|+|++|++|..+++.+...|++|+.++++++..+...+ ..+.. ...|..+.++....+.+.. .+++|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999988753333321 22322 1234444313333233221 13689
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++|.++|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99999983
No 305
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.39 E-value=0.0015 Score=53.89 Aligned_cols=104 Identities=17% Similarity=0.254 Sum_probs=70.9
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----ce----eEecCChhhHHHHHHHHC--C
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----DE----AFNYKEEADLNAALKRYF--P 147 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~----~~----~~~~~~~~~~~~~i~~~~--~ 147 (269)
-++.+++|+|+++|+|..++.-+...|++|+..+|+.++.+.+.+++.. .. ..|-.+..+......+.. .
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 3568999999999999999999999999999999998776665544432 22 234333212222222221 2
Q ss_pred CCccEEEeCCCch------------------------hHhhhHhhhhcC--CEEEEEecc
Q 024337 148 EGIDVYFENVGGK------------------------TLDAVLPNMKIR--GRIAACGMI 181 (269)
Q Consensus 148 ~~~d~vid~~g~~------------------------~~~~~~~~l~~~--G~~v~~g~~ 181 (269)
.+.|+.|+++|-- ..+..++.|+.. +|+|.++..
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~ 172 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI 172 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc
Confidence 3899999988831 134566666654 799988763
No 306
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.39 E-value=0.00029 Score=61.63 Aligned_cols=94 Identities=17% Similarity=0.180 Sum_probs=65.1
Q ss_pred hhcCCCCCEEE----EecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCC
Q 024337 74 VCSAKHGECVF----ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPE 148 (269)
Q Consensus 74 ~~~~~~~~~vl----I~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~ 148 (269)
..++++++.++ |+||+|++|.+++|+++..|++|+.+..++.+....+ ..+.+ .++|.+.. .+.+.+....
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~~-- 103 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKALY-- 103 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHHH--
Confidence 46788999998 9999999999999999999999999886655333333 33444 35665553 3333333211
Q ss_pred CccEEEeCCCchhHhhhHhhhhcCCEEEEEeccc
Q 024337 149 GIDVYFENVGGKTLDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 149 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 182 (269)
..+...++.|.++|+++.++...
T Consensus 104 -----------~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 104 -----------EFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred -----------HHHHHHHHhccCCCEEEEEcccc
Confidence 34556677778888888887643
No 307
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0046 Score=50.28 Aligned_cols=101 Identities=16% Similarity=0.188 Sum_probs=64.5
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC-CCCccE
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF-PEGIDV 152 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~-~~~~d~ 152 (269)
+++++|.|+ |++|..++..+. .|++|+.+++++++.+.+.+++ +.. ...|..+.++....+.+.. -+++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 467899998 799999999985 7999999999877665443233 321 1245555423333333321 147999
Q ss_pred EEeCCCch----h---------------HhhhHhhhhcCCEEEEEeccc
Q 024337 153 YFENVGGK----T---------------LDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 153 vid~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~ 182 (269)
+++++|.. . ++..++.++++|+++.++...
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 99999841 1 234455566677777766543
No 308
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.00098 Score=52.64 Aligned_cols=75 Identities=24% Similarity=0.220 Sum_probs=52.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-ceeEecCChhhHHHHHHHHCCC-CccEEEeC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEADLNAALKRYFPE-GIDVYFEN 156 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~-~~d~vid~ 156 (269)
++++++|.|++|++|..+++.+...|.+|+++.++.++ . +.. -...|..+..+..+.+.+.... ++|++|.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 35789999999999999999999999999999987654 1 111 1234555542333334433322 68999999
Q ss_pred CCc
Q 024337 157 VGG 159 (269)
Q Consensus 157 ~g~ 159 (269)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 884
No 309
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.36 E-value=0.003 Score=48.11 Aligned_cols=98 Identities=18% Similarity=0.152 Sum_probs=64.9
Q ss_pred hcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCCCc
Q 024337 75 CSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPEGI 150 (269)
Q Consensus 75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 150 (269)
..+.++.+||-.|+ |.|..+..+++.. +++|++++.+++..+.+++ +.+.+. +..... +..+ +.. .+.|
T Consensus 41 ~~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~f 113 (187)
T PRK00107 41 PYLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKF 113 (187)
T ss_pred hhcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCc
Confidence 34566899999996 5567777777644 6799999999887766653 344432 222221 2222 111 3379
Q ss_pred cEEEeCCCc---hhHhhhHhhhhcCCEEEEEe
Q 024337 151 DVYFENVGG---KTLDAVLPNMKIRGRIAACG 179 (269)
Q Consensus 151 d~vid~~g~---~~~~~~~~~l~~~G~~v~~g 179 (269)
|+|+..... ..+..+.+.|+++|+++.+-
T Consensus 114 DlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 114 DVVTSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred cEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 999875432 56778899999999999773
No 310
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.36 E-value=0.0013 Score=52.96 Aligned_cols=80 Identities=14% Similarity=0.253 Sum_probs=51.7
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH----cCCc-e--eEecCChhhHHHHHHHHC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNK----FGFD-E--AFNYKEEADLNAALKRYF--PE 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~----~g~~-~--~~~~~~~~~~~~~i~~~~--~~ 148 (269)
++++++|+||++++|..++..+...|++|+.+.+ ++++.+...+. .+.. . ..|..+..+..+.+.+.. -+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999988864 44443332212 2322 1 335554323333333322 13
Q ss_pred CccEEEeCCC
Q 024337 149 GIDVYFENVG 158 (269)
Q Consensus 149 ~~d~vid~~g 158 (269)
++|++++++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 7999999886
No 311
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.35 E-value=0.0025 Score=46.86 Aligned_cols=90 Identities=22% Similarity=0.278 Sum_probs=59.5
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
.-.|++++|.|- |-+|.-.++.++.+|++|+++..++-+.-.+. .-|.. +. ...+.+. ..|+++.+
T Consensus 20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~~-----~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEALR-----DADIFVTA 85 (162)
T ss_dssp --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHTT-----T-SEEEE-
T ss_pred eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHHh-----hCCEEEEC
Confidence 457999999998 99999999999999999999998887666555 44553 21 2333332 47999999
Q ss_pred CCchh--HhhhHhhhhcCCEEEEEec
Q 024337 157 VGGKT--LDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 157 ~g~~~--~~~~~~~l~~~G~~v~~g~ 180 (269)
+|... -.+.++.|+.+..+..+|.
T Consensus 86 TG~~~vi~~e~~~~mkdgail~n~Gh 111 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDGAILANAGH 111 (162)
T ss_dssp SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred CCCccccCHHHHHHhcCCeEEeccCc
Confidence 99843 3577888888777766654
No 312
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.35 E-value=0.0013 Score=52.82 Aligned_cols=80 Identities=13% Similarity=0.085 Sum_probs=53.5
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----cCC--ce--eEecCChhhHHHHHHHHC--CCC
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK----FGF--DE--AFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~----~g~--~~--~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
+++++|+|++|++|..+++.+...|++|+.++++.++.+.+.+. .+. .. ..|..+..+....+.+.. -++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999999999999999887765444322 221 11 234444312333333321 137
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|++++++|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999999973
No 313
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.35 E-value=0.0015 Score=52.72 Aligned_cols=80 Identities=14% Similarity=0.259 Sum_probs=51.8
Q ss_pred CCCEEEEecCcc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHcCCc--eeEecCChhhHHHHHHHHCC--CC
Q 024337 79 HGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKD---KVDLLKNKFGFD--EAFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g--~vG~~~i~~a~~~G~~V~~~~~s~~---~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
++++++|+||++ |+|.++++.+...|++|+.+++++. ..+.+..+.+.. ...|..+.++....+.+... ++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 468999999975 8999999999999999998887632 222232122221 22455554233333333322 37
Q ss_pred ccEEEeCCC
Q 024337 150 IDVYFENVG 158 (269)
Q Consensus 150 ~d~vid~~g 158 (269)
+|++++++|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 999999997
No 314
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.35 E-value=0.0019 Score=55.31 Aligned_cols=76 Identities=28% Similarity=0.357 Sum_probs=51.7
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-e--eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKRYFPEGIDVYFE 155 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~~~~~d~vid 155 (269)
++++++|+||+|++|.+.++.+...|++|+++++++++.+...+..+.. . ..|..+. + .+.+.. +++|++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-~---~v~~~l-~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-A---ALAELL-EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-H---HHHHHh-CCCCEEEE
Confidence 4789999999999999999999889999999998877654322121111 1 2344433 2 223222 36999999
Q ss_pred CCCc
Q 024337 156 NVGG 159 (269)
Q Consensus 156 ~~g~ 159 (269)
++|.
T Consensus 252 nAGi 255 (406)
T PRK07424 252 NHGI 255 (406)
T ss_pred CCCc
Confidence 8873
No 315
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=97.35 E-value=0.0028 Score=49.95 Aligned_cols=102 Identities=22% Similarity=0.256 Sum_probs=72.6
Q ss_pred hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcee--EecCChhhHHHHHHHHCCCCcc
Q 024337 75 CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEADLNAALKRYFPEGID 151 (269)
Q Consensus 75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~~~~d 151 (269)
.++.+|++||=.++ |+|-++..+++..|- +|++++.|++.++.+++++.-... +..... + ++.+. ..++.||
T Consensus 47 ~~~~~g~~vLDva~--GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~-d-Ae~LP-f~D~sFD 121 (238)
T COG2226 47 LGIKPGDKVLDVAC--GTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVG-D-AENLP-FPDNSFD 121 (238)
T ss_pred hCCCCCCEEEEecC--CccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEe-c-hhhCC-CCCCccC
Confidence 45568999998884 889999999998875 999999999999888755442110 211111 1 11121 1223899
Q ss_pred EEEeCCCc-------hhHhhhHhhhhcCCEEEEEecc
Q 024337 152 VYFENVGG-------KTLDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 152 ~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~ 181 (269)
++..+.|- ..+.++.|.|+|+|+++.+...
T Consensus 122 ~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~ 158 (238)
T COG2226 122 AVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFS 158 (238)
T ss_pred EEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence 99887773 4688999999999999988764
No 316
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.35 E-value=0.0015 Score=50.72 Aligned_cols=98 Identities=14% Similarity=0.120 Sum_probs=67.0
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHH
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKR 144 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~ 144 (269)
+...++++++||-.|+ |.|..++.+++..+ .+|++++.+++..+.+++++ +.. .++.. +..+.+.
T Consensus 66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~----d~~~~~~- 138 (205)
T PRK13944 66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG----DGKRGLE- 138 (205)
T ss_pred HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC----CcccCCc-
Confidence 4456788999999996 67888888888764 59999999988777666433 332 12222 2111111
Q ss_pred HCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337 145 YFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 145 ~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 178 (269)
..++||.|+-+... ...+...+.|+++|+++..
T Consensus 139 -~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 139 -KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred -cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 12379999877664 4556778999999999764
No 317
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.35 E-value=0.0027 Score=54.86 Aligned_cols=74 Identities=20% Similarity=0.371 Sum_probs=55.3
Q ss_pred cCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337 76 SAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYF 154 (269)
Q Consensus 76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 154 (269)
+..++++++|+|+ |.+|..+++.++..| .+|+++.++.++.+.+.+.+|.. .++.. +..+.+. ++|+||
T Consensus 176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~---~l~~~l~-----~aDvVi 245 (417)
T TIGR01035 176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE---DLEEYLA-----EADIVI 245 (417)
T ss_pred CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH---HHHHHHh-----hCCEEE
Confidence 3467899999998 999999999999999 48999999988765443377763 33221 3333332 589999
Q ss_pred eCCCc
Q 024337 155 ENVGG 159 (269)
Q Consensus 155 d~~g~ 159 (269)
+|+|.
T Consensus 246 ~aT~s 250 (417)
T TIGR01035 246 SSTGA 250 (417)
T ss_pred ECCCC
Confidence 99986
No 318
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.33 E-value=0.0016 Score=51.98 Aligned_cols=80 Identities=14% Similarity=0.208 Sum_probs=54.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
++.++||+||+|++|..+++.+...|++|+.++++.++.+.+.+.+ +.. . ..|..+..+..+.+.... -+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999999999999999999999999999999887665543222 221 1 234433312233333222 1368
Q ss_pred cEEEeCCC
Q 024337 151 DVYFENVG 158 (269)
Q Consensus 151 d~vid~~g 158 (269)
|++|.++|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999997
No 319
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.33 E-value=0.0026 Score=52.46 Aligned_cols=38 Identities=13% Similarity=0.194 Sum_probs=32.5
Q ss_pred CCCEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 024337 79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117 (269)
Q Consensus 79 ~~~~vlI~ga--~g~vG~~~i~~a~~~G~~V~~~~~s~~~~ 117 (269)
.|++++|+|+ ++|+|.++++.+...|++|++ .+..+++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 5889999999 899999999999999999988 5554443
No 320
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.002 Score=53.27 Aligned_cols=80 Identities=14% Similarity=0.201 Sum_probs=52.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHH---HcCCc---eeEecCChhhHHHHH
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----------DKVDLLKN---KFGFD---EAFNYKEEADLNAAL 142 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~----------~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i 142 (269)
.+++++|+||++|+|.++++.+...|++|++++++. ++.+.+.+ ..+.. ...|..+..+....+
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 478999999999999999999999999999999863 23322221 33322 123444432333333
Q ss_pred HHHCC--CCccEEEeCC-C
Q 024337 143 KRYFP--EGIDVYFENV-G 158 (269)
Q Consensus 143 ~~~~~--~~~d~vid~~-g 158 (269)
.+... +++|++++++ |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 33221 3799999988 5
No 321
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.31 E-value=0.0033 Score=52.29 Aligned_cols=94 Identities=16% Similarity=0.215 Sum_probs=61.6
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee-EecCChhhHHHHHHHHCCCCccEEEeCCCch
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-FNYKEEADLNAALKRYFPEGIDVYFENVGGK 160 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 160 (269)
+|+|+||+|-+|..+++.+...|.+|.+++|+.++...+. ..+...+ .|..+..++.+.+ . ++|+||++++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~al----~-g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLPETLPPSF----K-GVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCHHHHHHHH----C-CCCEEEECCCCC
Confidence 6999999999999999999999999999999877665554 4455322 2333321222222 2 589999987631
Q ss_pred -----h--------HhhhHhhhhcCC--EEEEEecc
Q 024337 161 -----T--------LDAVLPNMKIRG--RIAACGMI 181 (269)
Q Consensus 161 -----~--------~~~~~~~l~~~G--~~v~~g~~ 181 (269)
. ....++.++..| +++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 0 123344444443 78877653
No 322
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.31 E-value=0.0024 Score=48.05 Aligned_cols=81 Identities=15% Similarity=0.178 Sum_probs=56.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--ce-e--EecCChhhHHHHHHHHCC--CCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DE-A--FNYKEEADLNAALKRYFP--EGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~~-~--~~~~~~~~~~~~i~~~~~--~~~d 151 (269)
.....+|.|+++|+|.+..|.+...|++|.+.+......+.....++. ++ . .|.++..+....+++... +.++
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 356789999999999999999999999999999877665554436665 22 2 344443233332443322 3799
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++++|+|-
T Consensus 93 vlVncAGI 100 (256)
T KOG1200|consen 93 VLVNCAGI 100 (256)
T ss_pred EEEEcCcc
Confidence 99999993
No 323
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0017 Score=52.60 Aligned_cols=78 Identities=19% Similarity=0.170 Sum_probs=51.9
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCccEE
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGIDVY 153 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~v 153 (269)
+++|+||+|++|...++.+...|++|++++++.++.+.+.+.+ +... ..|..+..+..+.+.... .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999889999999999887765433222 2221 234433312222222221 1369999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
|.++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999984
No 324
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.31 E-value=0.0019 Score=51.76 Aligned_cols=80 Identities=19% Similarity=0.272 Sum_probs=51.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCc-e--eEecCChhhHHHHHHHHC--CCCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVDLLKNKFGFD-E--AFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~--~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
++++++|+|+++++|.++++.+...|++|+.++++.. ..+.++ ..+.. . ..|..+.++..+.+.+.. .+++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999999998875432 223333 33422 1 234443313333333322 13799
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++++++|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999974
No 325
>PLN02476 O-methyltransferase
Probab=97.31 E-value=0.0047 Score=49.92 Aligned_cols=104 Identities=15% Similarity=0.142 Sum_probs=71.2
Q ss_pred HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHH
Q 024337 71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRY 145 (269)
Q Consensus 71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~ 145 (269)
+....+..+.++||=.| +++|..++.+++.++ .+|+.++.+++..+.+++. .|...-+..... +..+.+.++
T Consensus 110 L~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l 186 (278)
T PLN02476 110 LAMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSM 186 (278)
T ss_pred HHHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHH
Confidence 33446677889999998 588999999998774 4899999999888777644 465433333332 444444443
Q ss_pred C----CCCccEEEeCCC-c---hhHhhhHhhhhcCCEEEE
Q 024337 146 F----PEGIDVYFENVG-G---KTLDAVLPNMKIRGRIAA 177 (269)
Q Consensus 146 ~----~~~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~ 177 (269)
. .+.||.||--.. . ..++.++++|+++|.++.
T Consensus 187 ~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~ 226 (278)
T PLN02476 187 IQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM 226 (278)
T ss_pred HhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 1 247997754443 2 567889999999998775
No 326
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0021 Score=51.09 Aligned_cols=78 Identities=15% Similarity=0.222 Sum_probs=51.9
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc-e--eEecCChhhHHHHHHHHCCCCccEE
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD-E--AFNYKEEADLNAALKRYFPEGIDVY 153 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~-~--~~~~~~~~~~~~~i~~~~~~~~d~v 153 (269)
++++|+||+|++|...++.+...|++|+++++++++.+...+.+ +.. . ..|..+..+..+.+.+. ..++|++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSL-PALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHH-hhcCCEE
Confidence 57999999999999999999999999999999887665433222 111 1 23444331233333332 1257999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
+.++|.
T Consensus 81 v~~ag~ 86 (243)
T PRK07102 81 LIAVGT 86 (243)
T ss_pred EECCcC
Confidence 988874
No 327
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.29 E-value=0.0015 Score=50.71 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=65.6
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HcCCcee-EecCChhhHHHHHHHHC
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKN---KFGFDEA-FNYKEEADLNAALKRYF 146 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~i~~~~ 146 (269)
+...++++++||-.|+ |.|+.++-+++..|. +|+.+.+.++-.+.+++ .++...+ +...+. ..-+.+
T Consensus 66 ~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg---~~g~~~-- 138 (209)
T PF01135_consen 66 EALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG---SEGWPE-- 138 (209)
T ss_dssp HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G---GGTTGG--
T ss_pred HHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch---hhcccc--
Confidence 5577999999999994 779999999998875 79999988875555544 4455432 222111 111111
Q ss_pred CCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337 147 PEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 147 ~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 178 (269)
.++||.|+-+.+. ..-...++.|+++|++|..
T Consensus 139 ~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 139 EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 1379999988886 4456788899999999975
No 328
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.27 E-value=0.0021 Score=51.47 Aligned_cols=100 Identities=15% Similarity=0.114 Sum_probs=62.3
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-cCCce-eEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK-FGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENV 157 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 157 (269)
+.+|+|+||+|.+|..+++.+...|.+|+++.|+.++....... .+... ..|..+. .+.+.+....++|++|.+.
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---SDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC---HHHHHHHhhcCCCEEEECC
Confidence 57999999999999999999988899999999888765433211 11221 2344331 1222222222699999988
Q ss_pred Cch--------------hHhhhHhhhhc--CCEEEEEeccc
Q 024337 158 GGK--------------TLDAVLPNMKI--RGRIAACGMIS 182 (269)
Q Consensus 158 g~~--------------~~~~~~~~l~~--~G~~v~~g~~~ 182 (269)
|.. .....++.+.. .++++.++...
T Consensus 94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 741 12233444443 36888877643
No 329
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.27 E-value=0.0021 Score=51.24 Aligned_cols=83 Identities=11% Similarity=0.147 Sum_probs=54.3
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc--ee--EecC--ChhhHHHHHHHHCC
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD--EA--FNYK--EEADLNAALKRYFP 147 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~--~~--~~~~--~~~~~~~~i~~~~~ 147 (269)
..++.+++|.|++|++|...++.+...|++|++++++.++.+.+.+++ +.. .. .|.+ +..++.+.+.....
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 457889999999999999999999889999999999887654433222 221 11 2332 11122222222211
Q ss_pred --CCccEEEeCCCc
Q 024337 148 --EGIDVYFENVGG 159 (269)
Q Consensus 148 --~~~d~vid~~g~ 159 (269)
+++|.+|.++|.
T Consensus 89 ~~~~id~vi~~Ag~ 102 (247)
T PRK08945 89 QFGRLDGVLHNAGL 102 (247)
T ss_pred HhCCCCEEEECCcc
Confidence 368999998863
No 330
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0022 Score=52.11 Aligned_cols=80 Identities=23% Similarity=0.341 Sum_probs=52.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-------HH----HHHHHcCCce---eEecCChhhHHHHHHH
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-------VD----LLKNKFGFDE---AFNYKEEADLNAALKR 144 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-------~~----~~~~~~g~~~---~~~~~~~~~~~~~i~~ 144 (269)
++.+++|+||+|++|..+++.+...|++|++++++.+. .+ .++ ..+... ..|..+.++..+.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE-AAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHH
Confidence 46799999999999999999999999999999987542 11 122 223321 2455554233333332
Q ss_pred HCC--CCccEEEeCCCc
Q 024337 145 YFP--EGIDVYFENVGG 159 (269)
Q Consensus 145 ~~~--~~~d~vid~~g~ 159 (269)
... +++|++|+++|.
T Consensus 84 ~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 84 AVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHhCCCCEEEECCCC
Confidence 211 369999999884
No 331
>PRK05599 hypothetical protein; Provisional
Probab=97.27 E-value=0.0018 Score=51.68 Aligned_cols=77 Identities=14% Similarity=0.158 Sum_probs=51.6
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc--e--eEecCChhhHHHHHHHHC--CCCccE
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD--E--AFNYKEEADLNAALKRYF--PEGIDV 152 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~--~--~~~~~~~~~~~~~i~~~~--~~~~d~ 152 (269)
+++|+||++|+|.+.+..+. .|.+|+.+++++++.+.+.+++ +.. . .+|..+.++..+.+.+.. -+++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999999998877 5999999999988776553333 321 1 234444312322232222 147999
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
++.++|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9998874
No 332
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.27 E-value=0.0017 Score=52.37 Aligned_cols=81 Identities=16% Similarity=0.260 Sum_probs=52.6
Q ss_pred CCCEEEEecC--cchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCC--CC
Q 024337 79 HGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGS---KDKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 79 ~~~~vlI~ga--~g~vG~~~i~~a~~~G~~V~~~~~s---~~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
++++++|+|| ++++|.++++.+...|++|+.+.+. +++.+.+.++++.. ...|..+.++..+.+.+... ++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999996 5799999999999999999987643 33444333244432 23455544233333333322 47
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|++++++|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999999873
No 333
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0033 Score=51.12 Aligned_cols=80 Identities=15% Similarity=0.155 Sum_probs=53.3
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHC--CCCcc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
..+++|+||+|++|..+++.+...|++|++++++.++.+...+ ..+... ..|..+.++....+.+.. -+++|
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE 89 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999988776544332 223321 134444323333333221 13689
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++|.++|.
T Consensus 90 ~vi~~Ag~ 97 (274)
T PRK07775 90 VLVSGAGD 97 (274)
T ss_pred EEEECCCc
Confidence 99999974
No 334
>PRK12743 oxidoreductase; Provisional
Probab=97.26 E-value=0.0024 Score=51.26 Aligned_cols=80 Identities=15% Similarity=0.247 Sum_probs=51.1
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
+++++|+||++++|..+++.+...|++|+.+.+ +.++.+.+.+ ..+.. . ..|..+..+....+.+... +++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999999999999988764 4443333221 33432 1 2444443122222322211 368
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999999884
No 335
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=97.26 E-value=0.01 Score=42.05 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=59.1
Q ss_pred EEEecCcchHHHHHHHHHHHcC--CEEEEEeC--CHHHH-HHHHHHcCCceeEecCChhhHHHHH---------------
Q 024337 83 VFISAASGAVGQLVGQFAKLLG--CYVVGSAG--SKDKV-DLLKNKFGFDEAFNYKEEADLNAAL--------------- 142 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~--s~~~~-~~~~~~~g~~~~~~~~~~~~~~~~i--------------- 142 (269)
|.|+|+||++|..+.++.+.+. ++|++..- +-+.+ +.++ +|.+.+++-.++ +..+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~--~~~~~l~~~~~~~~~~~~v~~ 77 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADE--EAYEELKKALPSKGPGIEVLS 77 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSH--HHHHHHHHHHHHTTSSSEEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCH--HHHHHHHHHhhhcCCCCEEEe
Confidence 6799999999999999999987 58877663 22333 3344 787776654443 222222
Q ss_pred -----HHHCC-CCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337 143 -----KRYFP-EGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 143 -----~~~~~-~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 178 (269)
.++.. ..+|+++.+.-+ ..+...+..++.+-++.+.
T Consensus 78 G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLA 120 (129)
T PF02670_consen 78 GPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALA 120 (129)
T ss_dssp SHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE-
T ss_pred ChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEe
Confidence 22222 378888887765 7788888888877666553
No 336
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.26 E-value=0.0073 Score=48.19 Aligned_cols=103 Identities=15% Similarity=0.194 Sum_probs=63.7
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHH----HHHHHcCCc---eeEecCChhhHHHHHHHHCC--CC
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVD----LLKNKFGFD---EAFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~----~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
+.+++|.||+|++|...++.+...|++|+.+.++ .++.. .++ ..+.. ...|..+..+....+.+... ++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999988999998877643 22222 222 33322 12344443123222333211 36
Q ss_pred ccEEEeCCCc-h-------------------------hHhhhHhhhhcCCEEEEEecccc
Q 024337 150 IDVYFENVGG-K-------------------------TLDAVLPNMKIRGRIAACGMISQ 183 (269)
Q Consensus 150 ~d~vid~~g~-~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 183 (269)
+|++|.++|. . ..+.+.+.++..|+++.++....
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 8999999983 0 02334555567789998877554
No 337
>PRK09135 pteridine reductase; Provisional
Probab=97.24 E-value=0.0024 Score=50.81 Aligned_cols=80 Identities=11% Similarity=0.118 Sum_probs=51.3
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHc----CCc---eeEecCChhhHHHHHHHHC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKNKF----GFD---EAFNYKEEADLNAALKRYF--PE 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~~~~----g~~---~~~~~~~~~~~~~~i~~~~--~~ 148 (269)
.+++++|+||+|++|..+++.+...|++|++++++. ++.+.+.+.+ +.. ...|..+.++....+.+.. -+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999998999999999753 3333322111 111 1235544312333333221 13
Q ss_pred CccEEEeCCC
Q 024337 149 GIDVYFENVG 158 (269)
Q Consensus 149 ~~d~vid~~g 158 (269)
++|++|.++|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 6899999998
No 338
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.24 E-value=0.0019 Score=51.66 Aligned_cols=80 Identities=15% Similarity=0.200 Sum_probs=53.9
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
+.++||+|++|++|..++..+...|.+|++++++.++.+.+.+.+ +.. ...|..+.+++...+.+.. -+++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999999999999999999889999999999887766554222 221 1234444323333232221 13689
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++|.+.|.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99998864
No 339
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.00098 Score=53.61 Aligned_cols=76 Identities=18% Similarity=0.249 Sum_probs=50.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE 155 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid 155 (269)
++++++|+|++|++|..+++.+...|++|++++++++.. .. -... ...|..+.++....+.+.. -+++|++++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478999999999999999999999999999999875531 11 1111 1234444312222222221 136999999
Q ss_pred CCC
Q 024337 156 NVG 158 (269)
Q Consensus 156 ~~g 158 (269)
++|
T Consensus 84 ~ag 86 (260)
T PRK06523 84 VLG 86 (260)
T ss_pred CCc
Confidence 998
No 340
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=97.24 E-value=0.0035 Score=48.83 Aligned_cols=94 Identities=22% Similarity=0.250 Sum_probs=63.7
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFE 155 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid 155 (269)
-++.+||=.|+.| |+++.-+|+ +|++|++++.+++..+.++ ...... .+||... ..+.+.+. +++||+|++
T Consensus 58 l~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~~--~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAK-LHALESGVNIDYRQA--TVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHH-Hhhhhccccccchhh--hHHHHHhc-CCCccEEEE
Confidence 3788999999833 566666655 5899999999999999887 322221 2455542 22333221 148999976
Q ss_pred C-----CCc--hhHhhhHhhhhcCCEEEEE
Q 024337 156 N-----VGG--KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 156 ~-----~g~--~~~~~~~~~l~~~G~~v~~ 178 (269)
. +.. ..+..+.++++|+|.++..
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 3 332 4567899999999988765
No 341
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.23 E-value=0.012 Score=47.69 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=61.5
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
.++++++|.|+ |++|.+++..+...|++|+++.++.++.+.+.+.+... ..... ...+ .....+|++++|
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~----~~~~----~~~~~~DivIna 185 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF----SMDE----LPLHRVDLIINA 185 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe----chhh----hcccCccEEEEC
Confidence 45789999998 89999999999888999999999988766554344321 11111 1111 111258999999
Q ss_pred CCchh---H---hhhHhhhhcCCEEEEEec
Q 024337 157 VGGKT---L---DAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 157 ~g~~~---~---~~~~~~l~~~G~~v~~g~ 180 (269)
++... . ......++++..++.+..
T Consensus 186 tp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 186 TSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred CCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 98521 1 112345677777777654
No 342
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.23 E-value=0.0028 Score=51.05 Aligned_cols=104 Identities=10% Similarity=0.081 Sum_probs=66.9
Q ss_pred CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHcC-Cc---eeEecCChhhHHHHHHHHCC--
Q 024337 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGS---KDKVDLLKNKFG-FD---EAFNYKEEADLNAALKRYFP-- 147 (269)
Q Consensus 79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s---~~~~~~~~~~~g-~~---~~~~~~~~~~~~~~i~~~~~-- 147 (269)
.+++++|+||+ +|+|.++++.+...|++|+.++++ +++.+.+.+++. .. ...|..+..+....+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 46899999997 799999999999999999998754 344444443442 11 13455554233333333322
Q ss_pred CCccEEEeCCCc-h------h-----------------------HhhhHhhhhcCCEEEEEeccc
Q 024337 148 EGIDVYFENVGG-K------T-----------------------LDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 148 ~~~d~vid~~g~-~------~-----------------------~~~~~~~l~~~G~~v~~g~~~ 182 (269)
+++|++++++|. . . .+..++.++++|+++.++...
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 150 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLG 150 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccC
Confidence 479999998873 1 0 123455566679999887654
No 343
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.22 E-value=0.0024 Score=50.59 Aligned_cols=79 Identities=20% Similarity=0.267 Sum_probs=50.5
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
++++|+|++|++|..+++.+...|++|+++.+ ++++.+...++. +.. ...|..+..++...+.+.. .+++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 46899999999999999999999999999887 444433322122 211 1234444312333333221 13689
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
.+|.+.|.
T Consensus 81 ~vi~~ag~ 88 (242)
T TIGR01829 81 VLVNNAGI 88 (242)
T ss_pred EEEECCCC
Confidence 99999973
No 344
>PRK07069 short chain dehydrogenase; Validated
Probab=97.22 E-value=0.0021 Score=51.26 Aligned_cols=77 Identities=21% Similarity=0.280 Sum_probs=51.3
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHcC----Cc----eeEecCChhhHHHHHHHHCC--CCcc
Q 024337 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKNKFG----FD----EAFNYKEEADLNAALKRYFP--EGID 151 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~~~g----~~----~~~~~~~~~~~~~~i~~~~~--~~~d 151 (269)
++|+|++|++|...++.+...|++|++++++ .++.+.+.+.+. .. ...|..+.+++.+.+.+... +++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 7999999999999999999999999999987 555544432332 11 12355444233333333221 3689
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
+++.++|.
T Consensus 82 ~vi~~ag~ 89 (251)
T PRK07069 82 VLVNNAGV 89 (251)
T ss_pred EEEECCCc
Confidence 99999973
No 345
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=97.22 E-value=0.0077 Score=50.73 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=66.6
Q ss_pred CEEEEecCcchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHcCCceeEecCChhhHHHHHH-------------
Q 024337 81 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSA--GSKDKVDLLKNKFGFDEAFNYKEEADLNAALK------------- 143 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~--~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~------------- 143 (269)
++|.|+|+||++|..+...++.. .++|++++ ++.++.....++++..+++-.++ .....++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence 57999999999999999998776 56888876 34445444444888876544333 2222222
Q ss_pred -----HHCCC-CccEEEeCCCc-hhHhhhHhhhhcCCEEEEEe
Q 024337 144 -----RYFPE-GIDVYFENVGG-KTLDAVLPNMKIRGRIAACG 179 (269)
Q Consensus 144 -----~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g 179 (269)
++... .+|+|+.+.++ ..+...+..++.|-++.+..
T Consensus 80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLAN 122 (385)
T PRK05447 80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALAN 122 (385)
T ss_pred hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeC
Confidence 22222 58999999987 67788888888887776643
No 346
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.21 E-value=0.0021 Score=51.72 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=65.3
Q ss_pred CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCC-
Q 024337 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK------DKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFP- 147 (269)
Q Consensus 79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s~------~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~- 147 (269)
.+++++|+||+ +++|.++++.+...|++|+++.++. +..+.+.++.+.. ...|..+.++..+.+.+...
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 46899999985 7999999999999999998876432 2233333122211 12455554233333333221
Q ss_pred -CCccEEEeCCCch-------h-----------------------HhhhHhhhhcCCEEEEEeccc
Q 024337 148 -EGIDVYFENVGGK-------T-----------------------LDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 148 -~~~d~vid~~g~~-------~-----------------------~~~~~~~l~~~G~~v~~g~~~ 182 (269)
+++|++++++|.. . .+..++.|+++|+++.++...
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 3799999999831 1 234566677789999887644
No 347
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.20 E-value=0.003 Score=50.88 Aligned_cols=81 Identities=20% Similarity=0.172 Sum_probs=52.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--CCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
++++++|.||++++|..+++.+...|++|+.+.++. +..+.+.+ ..+.. ...|..+.++..+.+.... .++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999998888743 33332221 22322 1235554323333333222 137
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|+++.++|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 348
>PRK08264 short chain dehydrogenase; Validated
Probab=97.20 E-value=0.0032 Score=49.88 Aligned_cols=77 Identities=17% Similarity=0.205 Sum_probs=52.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
.+.+++|+||+|++|..+++.+...|+ +|+++.++.++.+. . .-.... ..|..+..++.+.+.+ . +.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~-~-~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-L-GPRVVPLQLDVTDPASVAAAAEA-A-SDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-c-CCceEEEEecCCCHHHHHHHHHh-c-CCCCEEEEC
Confidence 467899999999999999999999999 99999988765442 1 111111 2344443122232322 1 258999999
Q ss_pred CCc
Q 024337 157 VGG 159 (269)
Q Consensus 157 ~g~ 159 (269)
+|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 875
No 349
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.18 E-value=0.002 Score=59.14 Aligned_cols=81 Identities=17% Similarity=0.271 Sum_probs=56.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCc----eeEecCChhhHHHHHHHHC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF----GFD----EAFNYKEEADLNAALKRYF--PE 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~----g~~----~~~~~~~~~~~~~~i~~~~--~~ 148 (269)
.+++++|+||+|++|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+..++...+.+.. -+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999999999999887665543232 221 1234444323333333322 13
Q ss_pred CccEEEeCCCc
Q 024337 149 GIDVYFENVGG 159 (269)
Q Consensus 149 ~~d~vid~~g~ 159 (269)
++|++++++|.
T Consensus 493 ~iDilV~nAG~ 503 (676)
T TIGR02632 493 GVDIVVNNAGI 503 (676)
T ss_pred CCcEEEECCCC
Confidence 79999999984
No 350
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.17 E-value=0.0026 Score=50.76 Aligned_cols=81 Identities=14% Similarity=0.214 Sum_probs=51.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HcCCce---eEecCChhhHHHHHHHHC--CCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
++.+++|+||+|++|..++..+...|++|+++ .++.++.+.+.+ ..+... ..|..+..+....+.+.. -++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999998764 566655433321 233321 234444312333333321 136
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|++|+++|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999999973
No 351
>PRK05855 short chain dehydrogenase; Validated
Probab=97.17 E-value=0.0022 Score=57.84 Aligned_cols=81 Identities=16% Similarity=0.111 Sum_probs=56.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHC--CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYF--PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~--~~~~ 150 (269)
.+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+. .|.. ...|..+.....+.+.+.. .+++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 467899999999999999999999999999999998776554322 2332 1245555412323333322 1369
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++++++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999984
No 352
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.17 E-value=0.0027 Score=50.43 Aligned_cols=80 Identities=21% Similarity=0.333 Sum_probs=52.1
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHc---CCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKNKF---GFD-E--AFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~~~---g~~-~--~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
+.+++|.|++|++|...+..+...|++|+++ .++.++.+.+.+.+ +.. . ..|..+..++...+.+... +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999999888889999998 88777655443232 211 1 2344443122222222211 369
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998874
No 353
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=97.16 E-value=0.0043 Score=50.25 Aligned_cols=70 Identities=13% Similarity=0.106 Sum_probs=51.4
Q ss_pred cCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337 76 SAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYF 154 (269)
Q Consensus 76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 154 (269)
+...+++++|+|+ ||.+.+++..++..|+ +|+++.|+.++.+.+.+.++.. +.+.+. ...+|+++
T Consensus 118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~~---~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDLG---GIEADILV 183 (272)
T ss_pred CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhcc---cccCCEEE
Confidence 3445678999998 9999999999999998 7999999998887766455421 111111 12589999
Q ss_pred eCCCc
Q 024337 155 ENVGG 159 (269)
Q Consensus 155 d~~g~ 159 (269)
+|++-
T Consensus 184 NaTp~ 188 (272)
T PRK12550 184 NVTPI 188 (272)
T ss_pred ECCcc
Confidence 99973
No 354
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.15 E-value=0.004 Score=49.77 Aligned_cols=80 Identities=18% Similarity=0.223 Sum_probs=51.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHcCCc-e--eEecCChhhHHHHHHH---HCCCCcc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNKFGFD-E--AFNYKEEADLNAALKR---YFPEGID 151 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~i~~---~~~~~~d 151 (269)
.+.+++|+||+|++|..++..+...|++|+.+.+ ++++.+.+.+.++.. . ..|..+..++.+.+.+ ..+.++|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 3578999999999999999999999999987654 455555444344422 1 2344443133333332 2222499
Q ss_pred EEEeCCC
Q 024337 152 VYFENVG 158 (269)
Q Consensus 152 ~vid~~g 158 (269)
+++.++|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9999886
No 355
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=97.15 E-value=0.0092 Score=47.30 Aligned_cols=104 Identities=16% Similarity=0.130 Sum_probs=70.1
Q ss_pred HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHH
Q 024337 71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRY 145 (269)
Q Consensus 71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~ 145 (269)
|....+..+.++||-.| .++|..++.+++..+ .+|+.++.+++..+.+++. .|....+..... +..+.+.++
T Consensus 60 L~~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l 136 (234)
T PLN02781 60 LSMLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQL 136 (234)
T ss_pred HHHHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHH
Confidence 33456778889999998 477888888887763 4999999999988777643 354332222222 444444443
Q ss_pred C----CCCccEEEeCCCc----hhHhhhHhhhhcCCEEEE
Q 024337 146 F----PEGIDVYFENVGG----KTLDAVLPNMKIRGRIAA 177 (269)
Q Consensus 146 ~----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~ 177 (269)
. .+.||+||--... ..+..+++.+++||.++.
T Consensus 137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~ 176 (234)
T PLN02781 137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF 176 (234)
T ss_pred HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 2 2379988754432 567888999999998775
No 356
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=97.15 E-value=0.019 Score=46.61 Aligned_cols=107 Identities=17% Similarity=0.233 Sum_probs=76.0
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----ceeEecCChhh---HHHHHHHHCCC-C
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEAD---LNAALKRYFPE-G 149 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~----~~~~~~~~~~~---~~~~i~~~~~~-~ 149 (269)
.+++.|+|+|+-+|.|...+.-+...|.+|++.|..++..+.++.+..- ...+|..++++ ..+.+++..++ +
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 4567899999999999999999999999999999888877766633311 12456655422 33445555655 7
Q ss_pred ccEEEeCCCc-h--------------------------hHhhhHhhhhc-CCEEEEEeccccc
Q 024337 150 IDVYFENVGG-K--------------------------TLDAVLPNMKI-RGRIAACGMISQY 184 (269)
Q Consensus 150 ~d~vid~~g~-~--------------------------~~~~~~~~l~~-~G~~v~~g~~~~~ 184 (269)
.=-+++++|- . .-+..+.++++ .||+|.++...++
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 8888999982 1 12344556665 7999999887764
No 357
>PLN00015 protochlorophyllide reductase
Probab=97.15 E-value=0.0031 Score=52.22 Aligned_cols=76 Identities=16% Similarity=0.138 Sum_probs=52.3
Q ss_pred EEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCC---c---eeEecCChhhHHHHHHHHC--CCCccEEE
Q 024337 84 FISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGF---D---EAFNYKEEADLNAALKRYF--PEGIDVYF 154 (269)
Q Consensus 84 lI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~---~---~~~~~~~~~~~~~~i~~~~--~~~~d~vi 154 (269)
+|+||++|+|..+++.+...| ++|+.++++.++.+.+.++++. . ...|..+..+....+.+.. .+++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999999998899 8999999988876655435432 1 1345555423333333332 23799999
Q ss_pred eCCCc
Q 024337 155 ENVGG 159 (269)
Q Consensus 155 d~~g~ 159 (269)
+++|.
T Consensus 81 nnAG~ 85 (308)
T PLN00015 81 CNAAV 85 (308)
T ss_pred ECCCc
Confidence 99973
No 358
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=97.14 E-value=0.0066 Score=49.06 Aligned_cols=103 Identities=13% Similarity=0.145 Sum_probs=68.4
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccE
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDV 152 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~ 152 (269)
...++.++.+||=.|+ |.|..+..+++..+++|++++.+++..+.+++.+.....+..... ++.+ ....++.||+
T Consensus 46 ~~l~l~~~~~VLDiGc--G~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~--~~~~~~~FD~ 120 (263)
T PTZ00098 46 SDIELNENSKVLDIGS--GLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILK--KDFPENTFDM 120 (263)
T ss_pred HhCCCCCCCEEEEEcC--CCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Cccc--CCCCCCCeEE
Confidence 5567889999999987 456667777777789999999999988888744432111111111 2110 0011237999
Q ss_pred EEeCC-----C--c--hhHhhhHhhhhcCCEEEEEec
Q 024337 153 YFENV-----G--G--KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 153 vid~~-----g--~--~~~~~~~~~l~~~G~~v~~g~ 180 (269)
|+..- + . ..++.+.+.|+|+|+++....
T Consensus 121 V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 121 IYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 98621 2 1 457788999999999998654
No 359
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.14 E-value=0.0065 Score=46.40 Aligned_cols=98 Identities=17% Similarity=0.157 Sum_probs=61.7
Q ss_pred hcCCCCCEEEEecCcchHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCC-Cc
Q 024337 75 CSAKHGECVFISAASGAVGQLVGQFAKLL-G-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPE-GI 150 (269)
Q Consensus 75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G-~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~-~~ 150 (269)
..++++++||..|+ | .|..+..+++.. + .+|++++.++.. . ..++.. ..|..+. ...+.+.+..++ ++
T Consensus 28 ~~i~~g~~VLDiG~-G-tG~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 28 KLIKPGDTVLDLGA-A-PGGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDKV 99 (188)
T ss_pred cccCCCCEEEEecC-C-CCHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCCc
Confidence 45689999999997 4 344555555554 3 489999988754 1 223332 2244433 334445554444 89
Q ss_pred cEEEeC-----CCc-------------hhHhhhHhhhhcCCEEEEEec
Q 024337 151 DVYFEN-----VGG-------------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 151 d~vid~-----~g~-------------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
|+|+.. .|. ..+..+.+.|+++|+++....
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~ 147 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF 147 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 999952 121 346778899999999987543
No 360
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.13 E-value=0.0011 Score=53.57 Aligned_cols=77 Identities=14% Similarity=0.170 Sum_probs=51.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHC--CCCccEEEe
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYF--PEGIDVYFE 155 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~--~~~~d~vid 155 (269)
.+++++|+|++|++|..+++.+...|++|+.+++++++.+. .... ...|..+..++.+.+.+.. -+++|++++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46889999999999999999999999999999977654321 1111 1235444323333333322 137899999
Q ss_pred CCCc
Q 024337 156 NVGG 159 (269)
Q Consensus 156 ~~g~ 159 (269)
++|.
T Consensus 84 ~Ag~ 87 (266)
T PRK06171 84 NAGI 87 (266)
T ss_pred CCcc
Confidence 9883
No 361
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0051 Score=49.41 Aligned_cols=81 Identities=16% Similarity=0.185 Sum_probs=51.4
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
.+.+++|+||+|++|..+++.+...|++|+++++. .++.+.+.+.+ +.. ...|..+..+..+.+.+.. -++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999998999999887653 34433332122 332 1234444313333333221 137
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|++|.++|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 9999999973
No 362
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.12 E-value=0.012 Score=43.28 Aligned_cols=94 Identities=22% Similarity=0.205 Sum_probs=62.6
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEe
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFE 155 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid 155 (269)
.++.+++|.|+ |++|...++.+...| .+|++++++.++.+.+.++++... ..+.. +..+.+ .++|+++.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEELL-----AEADLIIN 87 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhcc-----ccCCEEEe
Confidence 45789999998 999999999998886 689999999887766554665421 01111 222211 36999999
Q ss_pred CCCchhH-----hhhHhhhhcCCEEEEEec
Q 024337 156 NVGGKTL-----DAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 156 ~~g~~~~-----~~~~~~l~~~G~~v~~g~ 180 (269)
|++.... ......++++..++.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 9986332 222344667777777655
No 363
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.12 E-value=0.0033 Score=50.30 Aligned_cols=79 Identities=13% Similarity=0.195 Sum_probs=52.6
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCce---eEecCChhhHHHHHHHHC--CCCccE
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDE---AFNYKEEADLNAALKRYF--PEGIDV 152 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~---~~~~~~~~~~~~~i~~~~--~~~~d~ 152 (269)
++++|.|++|++|...++.+...|++|+.+.+++++.+.+.+.+ +... ..|..+..+..+.+.+.. .+++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 36899999999999999999999999999998876654433222 3221 234444313333333321 136899
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
+|.++|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9999974
No 364
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.12 E-value=0.015 Score=47.50 Aligned_cols=93 Identities=19% Similarity=0.072 Sum_probs=59.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC----ceeEecCChhhHHHHHHHHCCCCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEADLNAALKRYFPEGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~~~~d~v 153 (269)
.+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.+.++. ..+.... +..+.+ ..+|+|
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDiV 196 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADGL 196 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCEE
Confidence 4678999998 9999999999999998 899999998887766545432 1122111 222222 248999
Q ss_pred EeCCCch-----hHhhhHhhhhcCCEEEEEec
Q 024337 154 FENVGGK-----TLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 154 id~~g~~-----~~~~~~~~l~~~G~~v~~g~ 180 (269)
|+|++.. ........++++..++.+-.
T Consensus 197 InaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY 228 (284)
T PRK12549 197 VHATPTGMAKHPGLPLPAELLRPGLWVADIVY 228 (284)
T ss_pred EECCcCCCCCCCCCCCCHHHcCCCcEEEEeee
Confidence 9997521 11112344666655555533
No 365
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=97.11 E-value=0.0023 Score=49.47 Aligned_cols=105 Identities=15% Similarity=0.139 Sum_probs=70.6
Q ss_pred HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHH
Q 024337 71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRY 145 (269)
Q Consensus 71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~ 145 (269)
|....+..+.++||-+| +.+|+.++.+|+.+ +.+|+.+..++++.+.+++ ..|....+..... +..+.+.++
T Consensus 37 L~~l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l 113 (205)
T PF01596_consen 37 LQMLVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPEL 113 (205)
T ss_dssp HHHHHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHH
T ss_pred HHHHHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHH
Confidence 33445566788999999 58899999999986 5699999999998877764 3455433332222 333444333
Q ss_pred ---C-CCCccEE-EeCCCc---hhHhhhHhhhhcCCEEEEE
Q 024337 146 ---F-PEGIDVY-FENVGG---KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 146 ---~-~~~~d~v-id~~g~---~~~~~~~~~l~~~G~~v~~ 178 (269)
. .+.||.| +|+.-. ..+..++++|+++|.++.=
T Consensus 114 ~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D 154 (205)
T PF01596_consen 114 ANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD 154 (205)
T ss_dssp HHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhccCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence 2 2379976 555543 4577888999999977753
No 366
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.10 E-value=0.0049 Score=48.92 Aligned_cols=81 Identities=20% Similarity=0.299 Sum_probs=51.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHH---cCCc-ee--EecCChhhHHHHHHHHCC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-VDLLKNK---FGFD-EA--FNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~-~~~~~~~---~g~~-~~--~~~~~~~~~~~~i~~~~~--~~ 149 (269)
.+.+++|+|++|++|...+..+...|++|+++.++... .+...+. .+.. .. .|..+..++.+.+.+... ++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999999887765542 2222212 2222 12 244443233333333322 26
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|.++.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 367
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0042 Score=57.06 Aligned_cols=80 Identities=21% Similarity=0.293 Sum_probs=55.9
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFD---EAFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
+++++|+||+|++|..++..+...|++|+++++++++.+.+.+++ +.. ...|..+.++..+.+.+.. -+++|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 678999999999999999999999999999999988766543232 321 1235554323333333322 13699
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++++++|.
T Consensus 451 ~li~~Ag~ 458 (657)
T PRK07201 451 YLVNNAGR 458 (657)
T ss_pred EEEECCCC
Confidence 99999983
No 368
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.10 E-value=0.0028 Score=51.74 Aligned_cols=75 Identities=13% Similarity=-0.026 Sum_probs=52.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
++.+++|+|+ |+++.+++..+...|+ +|+++.|+.++.+.+.+.++... +..... . +.+.+.. ..+|+||+|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~---~-~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG---D-SGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc---h-hhhhhcc-cCCCEEEEC
Confidence 5789999998 9999999999999998 89999999988877664554321 111111 0 1111111 258999999
Q ss_pred CCc
Q 024337 157 VGG 159 (269)
Q Consensus 157 ~g~ 159 (269)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 985
No 369
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.10 E-value=0.0028 Score=50.49 Aligned_cols=81 Identities=23% Similarity=0.295 Sum_probs=50.4
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHH-HHHH--HcCCce---eEecCChhhHHHHHHHHC--CCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVD-LLKN--KFGFDE---AFNYKEEADLNAALKRYF--PEG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~-~~~~--~~g~~~---~~~~~~~~~~~~~i~~~~--~~~ 149 (269)
++++++|+|++|++|..+++.+...|++|++..+ +..+.+ .+.+ ..+... ..|..+..+..+.+.+.. -++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3678999999999999999999999999888553 333222 2220 234322 234444312333333221 137
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|++++++|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 370
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.09 E-value=0.0029 Score=51.23 Aligned_cols=91 Identities=13% Similarity=0.060 Sum_probs=61.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCce----eEecCChhhHHHHHHHHCCC-CccE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEADLNAALKRYFPE-GIDV 152 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~----~~~~~~~~~~~~~i~~~~~~-~~d~ 152 (269)
++++++|.|| ||.+.+++.-++..|+ +++++.|+.++.+.+.+.++... ..+..+ .... .+|+
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~----------~~~~~~~dl 193 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALAD----------LEGLEEADL 193 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccc----------cccccccCE
Confidence 4789999999 9999999999999997 89999999999887775665321 111111 0011 3899
Q ss_pred EEeCCCch-hHh-----hhHhhhhcCCEEEEEec
Q 024337 153 YFENVGGK-TLD-----AVLPNMKIRGRIAACGM 180 (269)
Q Consensus 153 vid~~g~~-~~~-----~~~~~l~~~G~~v~~g~ 180 (269)
+|+|++-. .-. ....++++.-.+..+-.
T Consensus 194 iINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY 227 (283)
T COG0169 194 LINATPVGMAGPEGDSPVPAELLPKGAIVYDVVY 227 (283)
T ss_pred EEECCCCCCCCCCCCCCCcHHhcCcCCEEEEecc
Confidence 99999741 111 11455666666656543
No 371
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.08 E-value=0.0042 Score=46.52 Aligned_cols=96 Identities=23% Similarity=0.207 Sum_probs=64.8
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEec------------------CC--hhhHH
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY------------------KE--EADLN 139 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~------------------~~--~~~~~ 139 (269)
..+|+|+|+ |.+|+-++.+++.+|++|+..+...++.+..+ ..+...+... -. .+.+.
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 478999998 99999999999999999999999988888877 6666432220 01 01233
Q ss_pred HHHHHHCCCCccEEEeCCC--c-----hhHhhhHhhhhcCCEEEEEeccc
Q 024337 140 AALKRYFPEGIDVYFENVG--G-----KTLDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 140 ~~i~~~~~~~~d~vid~~g--~-----~~~~~~~~~l~~~G~~v~~g~~~ 182 (269)
+.+. .+|++|.+.- + -.-+..++.|+++..++.++...
T Consensus 98 ~~i~-----~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 98 EFIA-----PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHH-----H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHHh-----hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 3333 3798885331 1 12367788899888888876533
No 372
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0044 Score=48.60 Aligned_cols=77 Identities=16% Similarity=0.227 Sum_probs=51.0
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee--EecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA--FNYKEEADLNAALKRYFPEGIDVYFENV 157 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~--~~~~~~~~~~~~i~~~~~~~~d~vid~~ 157 (269)
..+++|+||+|++|...+..+... .+|++++++.++.+.+.+....... .|..+..++.+.+... +++|.+|.++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~a 79 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNA 79 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 358999999999999999888777 9999999998776655423321122 3333321222222221 2699999999
Q ss_pred Cc
Q 024337 158 GG 159 (269)
Q Consensus 158 g~ 159 (269)
|.
T Consensus 80 g~ 81 (227)
T PRK08219 80 GV 81 (227)
T ss_pred Cc
Confidence 84
No 373
>PRK00811 spermidine synthase; Provisional
Probab=97.06 E-value=0.0065 Score=49.61 Aligned_cols=97 Identities=12% Similarity=0.043 Sum_probs=64.1
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC-------ceeEecCChhhHHHHHHHHCCCC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF-------DEAFNYKEEADLNAALKRYFPEG 149 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~i~~~~~~~ 149 (269)
...++||+.|+ |.|..+..++++.+. +|.+++.+++-.+.+++.+.. +.-+..... +..+.+.+ .++.
T Consensus 75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCc
Confidence 45689999996 558888888887665 899999999988888854421 111111111 33344443 3458
Q ss_pred ccEEEeCCC-----------chhHhhhHhhhhcCCEEEEE
Q 024337 150 IDVYFENVG-----------GKTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 150 ~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~ 178 (269)
||+|+.-.. .+.++.+.+.|+++|.++.-
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 998875431 12357788999999998864
No 374
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=97.03 E-value=0.0048 Score=48.51 Aligned_cols=101 Identities=17% Similarity=0.209 Sum_probs=72.4
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcC---CceeEecCChhhHHHHHHHHCC
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEADLNAALKRYFP 147 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~ 147 (269)
...++.+|++|+=.| .|.|.+++-+++..|. +|+.....++..+.+++++. ....+..... | +.+...
T Consensus 88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-D----v~~~~~ 160 (256)
T COG2519 88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-D----VREGID 160 (256)
T ss_pred HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-c----cccccc
Confidence 457899999999877 4679999999998876 99999999998888776553 3332222211 2 222222
Q ss_pred C-CccEEE-eCCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337 148 E-GIDVYF-ENVGG-KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 148 ~-~~d~vi-d~~g~-~~~~~~~~~l~~~G~~v~~g~ 180 (269)
+ .||.++ |.--. ..++.+.+.|+++|+++.+..
T Consensus 161 ~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 161 EEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred ccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 2 788665 44444 788999999999999998754
No 375
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.03 E-value=0.006 Score=48.85 Aligned_cols=80 Identities=13% Similarity=0.171 Sum_probs=50.9
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---cCCc-e--eEecCChhhHHHHHHHHCC--CCc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~~---~g~~-~--~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
.++++|.|++|++|..+++.+...|++|++++++.. ..+...+. .+.. . ..|..+..++.+.+.+... +++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 367999999999999999999999999999987533 22222112 2221 1 2455543233333333321 369
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|+++.+.|.
T Consensus 82 d~vi~~ag~ 90 (256)
T PRK12745 82 DCLVNNAGV 90 (256)
T ss_pred CEEEECCcc
Confidence 999999873
No 376
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.02 E-value=0.013 Score=41.07 Aligned_cols=98 Identities=19% Similarity=0.269 Sum_probs=66.5
Q ss_pred hhcCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HcCCce--eEecCChhhHHHHHHHHCC
Q 024337 74 VCSAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEADLNAALKRYFP 147 (269)
Q Consensus 74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~---~~g~~~--~~~~~~~~~~~~~i~~~~~ 147 (269)
...+.++++++-.|+ |.|..+..+++..+ .+|++++.++...+.+++ .++... .+..+. ...... ..
T Consensus 14 ~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~----~~~~~~-~~ 86 (124)
T TIGR02469 14 KLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA----PEALED-SL 86 (124)
T ss_pred HcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc----cccChh-hc
Confidence 345677889999996 45999999998874 699999999988877653 233322 222211 111111 12
Q ss_pred CCccEEEeCCCc----hhHhhhHhhhhcCCEEEEE
Q 024337 148 EGIDVYFENVGG----KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 148 ~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~ 178 (269)
+++|+++...+. ..++.+.+.|+++|+++..
T Consensus 87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 87 PEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred CCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 379999876543 4678899999999999875
No 377
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.01 E-value=0.0029 Score=49.46 Aligned_cols=98 Identities=18% Similarity=0.221 Sum_probs=66.2
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---cCCce--eEecCChhhHHHHHHHH
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEADLNAALKRY 145 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~---~g~~~--~~~~~~~~~~~~~i~~~ 145 (269)
+...++++++||-.|+ |.|..++.+++..+. +|++++.+++..+.+++. +|.+. ++.. +..+...
T Consensus 71 ~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~----d~~~~~~-- 142 (215)
T TIGR00080 71 ELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG----DGTQGWE-- 142 (215)
T ss_pred HHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC----CcccCCc--
Confidence 4567899999999995 678888888887654 799999998887776643 34322 2211 1111111
Q ss_pred CCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337 146 FPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 146 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 178 (269)
..++||.|+-.... .......+.|+++|+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 11379988755443 5556788999999998864
No 378
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.01 E-value=0.00073 Score=55.12 Aligned_cols=145 Identities=20% Similarity=0.249 Sum_probs=82.7
Q ss_pred CCCCCCeEEeccceeeEEEecCCceeecCCCCCCcchhhhhcCCc-chhHHHHHHHhh-cCCCCCEEEEecCcchHHHHH
Q 024337 19 EFSKGDLVWGMTGWEEYSLITAPYLFKIQHTDVPLSYYTGILGMP-GMTAYVGFYEVC-SAKHGECVFISAASGAVGQLV 96 (269)
Q Consensus 19 ~~~~Gd~V~~~g~~~~~~~v~~~~~~~~~p~~~~~~~~~a~l~~~-~~~a~~~l~~~~-~~~~~~~vlI~ga~g~vG~~~ 96 (269)
.+++|++.+....|.+|-.-+...++.++|. +.| ... -.|...||.... ...++++||=.|. |.|.++
T Consensus 107 P~~vg~~~~I~P~w~~~~~~~~~~~I~idPg---~AF-----GTG~H~TT~lcl~~l~~~~~~g~~vLDvG~--GSGILa 176 (295)
T PF06325_consen 107 PIRVGDRLVIVPSWEEYPEPPDEIVIEIDPG---MAF-----GTGHHPTTRLCLELLEKYVKPGKRVLDVGC--GSGILA 176 (295)
T ss_dssp -EEECTTEEEEETT----SSTTSEEEEESTT---SSS------SSHCHHHHHHHHHHHHHSSTTSEEEEES---TTSHHH
T ss_pred cEEECCcEEEECCCcccCCCCCcEEEEECCC---Ccc-----cCCCCHHHHHHHHHHHHhccCCCEEEEeCC--cHHHHH
Confidence 3566777777777777733234455666343 332 222 233334443332 2678999999995 567777
Q ss_pred HHHHHHcCC-EEEEEeCCHHHHHHHHHHc---CCceeEe-cCChhhHHHHHHHHCCCCccEEEeCCCc----hhHhhhHh
Q 024337 97 GQFAKLLGC-YVVGSAGSKDKVDLLKNKF---GFDEAFN-YKEEADLNAALKRYFPEGIDVYFENVGG----KTLDAVLP 167 (269)
Q Consensus 97 i~~a~~~G~-~V~~~~~s~~~~~~~~~~~---g~~~~~~-~~~~~~~~~~i~~~~~~~~d~vid~~g~----~~~~~~~~ 167 (269)
+..++ +|+ +|++++.++...+.++++. |....+. .... + ...++||+|+-+.-. ..+....+
T Consensus 177 iaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~-------~~~~~~dlvvANI~~~vL~~l~~~~~~ 247 (295)
T PF06325_consen 177 IAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-D-------LVEGKFDLVVANILADVLLELAPDIAS 247 (295)
T ss_dssp HHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-C-------TCCS-EEEEEEES-HHHHHHHHHHCHH
T ss_pred HHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-c-------cccccCCEEEECCCHHHHHHHHHHHHH
Confidence 76666 487 8999998888777666433 2221111 1111 1 112479999977764 34456677
Q ss_pred hhhcCCEEEEEeccc
Q 024337 168 NMKIRGRIAACGMIS 182 (269)
Q Consensus 168 ~l~~~G~~v~~g~~~ 182 (269)
.++++|.+++.|...
T Consensus 248 ~l~~~G~lIlSGIl~ 262 (295)
T PF06325_consen 248 LLKPGGYLILSGILE 262 (295)
T ss_dssp HEEEEEEEEEEEEEG
T ss_pred hhCCCCEEEEccccH
Confidence 888999999988743
No 379
>PRK07402 precorrin-6B methylase; Provisional
Probab=97.01 E-value=0.033 Score=42.82 Aligned_cols=101 Identities=19% Similarity=0.225 Sum_probs=64.6
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---cCCce--eEecCChhhHHHHHHHHC
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNK---FGFDE--AFNYKEEADLNAALKRYF 146 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~---~g~~~--~~~~~~~~~~~~~i~~~~ 146 (269)
....+.++++|+=.|+ |.|..++.+++.. +.+|++++.+++..+.++++ ++... ++.. +..+.+....
T Consensus 34 ~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~----d~~~~~~~~~ 107 (196)
T PRK07402 34 SQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG----SAPECLAQLA 107 (196)
T ss_pred HhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC----chHHHHhhCC
Confidence 4456778999988885 5677777777654 56999999999988877643 44432 2222 2222222221
Q ss_pred CCCcc-EEEeCCCc--hhHhhhHhhhhcCCEEEEEec
Q 024337 147 PEGID-VYFENVGG--KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 147 ~~~~d-~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 180 (269)
..+| +.++.... ..++.+.+.|+++|+++....
T Consensus 108 -~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 108 -PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred -CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 2234 44443322 567888999999999987643
No 380
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.00 E-value=0.0067 Score=52.01 Aligned_cols=104 Identities=17% Similarity=0.172 Sum_probs=64.2
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHHc-CCce-eEecCChhhHHHHHHHHCCC
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD------LLKNKF-GFDE-AFNYKEEADLNAALKRYFPE 148 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~------~~~~~~-g~~~-~~~~~~~~~~~~~i~~~~~~ 148 (269)
-..+.+|+|+||+|.+|..+++.+...|.+|++++++..+.+ ...+.. +... ..|..+..++.+.+++. +.
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~ 135 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-GD 135 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-CC
Confidence 356789999999999999999999889999999998865431 111011 2222 34555441333333322 11
Q ss_pred CccEEEeCCCch------h-------HhhhHhhhhcC--CEEEEEecc
Q 024337 149 GIDVYFENVGGK------T-------LDAVLPNMKIR--GRIAACGMI 181 (269)
Q Consensus 149 ~~d~vid~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~ 181 (269)
++|+||+|++.. . ....++.++.. +++|.++..
T Consensus 136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 699999998731 0 12333444433 478887754
No 381
>PLN02366 spermidine synthase
Probab=96.99 E-value=0.0088 Score=49.33 Aligned_cols=99 Identities=15% Similarity=0.104 Sum_probs=64.0
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC------ceeEecCChhhHHHHHHHHCCCCc
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEADLNAALKRYFPEGI 150 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~------~~~~~~~~~~~~~~~i~~~~~~~~ 150 (269)
.+.++||+.|+ |-|..+..++++-+. +|.++..+++-.+.+++.+.. +.-+..... +..+.+++..++.|
T Consensus 90 ~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~y 166 (308)
T PLN02366 90 PNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGTY 166 (308)
T ss_pred CCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCCC
Confidence 56789999996 447777788887665 899999888878888744431 111111111 33444444334479
Q ss_pred cEEEeCCCc-----------hhHhhhHhhhhcCCEEEEEe
Q 024337 151 DVYFENVGG-----------KTLDAVLPNMKIRGRIAACG 179 (269)
Q Consensus 151 d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~g 179 (269)
|+||--... +.++.+.+.|+++|.++.-.
T Consensus 167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 987653221 34778899999999987643
No 382
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.99 E-value=0.0027 Score=48.90 Aligned_cols=98 Identities=14% Similarity=0.017 Sum_probs=62.8
Q ss_pred hcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCCcc
Q 024337 75 CSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGID 151 (269)
Q Consensus 75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d 151 (269)
....++.+||-.|+ |.|..+..+++. |.+|++++.|++..+.+++.. +... ++.... ++.+. ..++.||
T Consensus 26 l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~~~---~~~~~fD 97 (197)
T PRK11207 26 VKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLNNL---TFDGEYD 97 (197)
T ss_pred cccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-ChhhC---CcCCCcC
Confidence 34556789999996 568888888875 889999999998777665322 2221 111111 22111 1123799
Q ss_pred EEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337 152 VYFENVGG---------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 152 ~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
+|+.+..- ..+..+.+.|+++|.++.+..
T Consensus 98 ~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~ 135 (197)
T PRK11207 98 FILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 135 (197)
T ss_pred EEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 99876431 346778889999999765543
No 383
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.98 E-value=0.012 Score=43.89 Aligned_cols=94 Identities=14% Similarity=0.070 Sum_probs=60.1
Q ss_pred cCCcchhHHHHHHHhhcCCCCCEEEEecCcch-HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhH
Q 024337 60 LGMPGMTAYVGFYEVCSAKHGECVFISAASGA-VGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL 138 (269)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~-vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~ 138 (269)
.|+....+...+.....--.+.+|+|.|+ |. +|..++..++..|++|+++.++.+ +.
T Consensus 24 ~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~l 81 (168)
T cd01080 24 IPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK---------------------NL 81 (168)
T ss_pred cCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------hH
Confidence 34443444444433333357899999999 65 599999999999999888886532 22
Q ss_pred HHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337 139 NAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 139 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 181 (269)
.+.+. .+|+||.+++...+ .-.+.++++-.++.++.+
T Consensus 82 ~~~l~-----~aDiVIsat~~~~i-i~~~~~~~~~viIDla~p 118 (168)
T cd01080 82 KEHTK-----QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGIN 118 (168)
T ss_pred HHHHh-----hCCEEEEcCCCCce-ecHHHccCCeEEEEccCC
Confidence 23333 37999999997332 222346666566666653
No 384
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.98 E-value=0.029 Score=37.49 Aligned_cols=86 Identities=21% Similarity=0.207 Sum_probs=58.8
Q ss_pred EEEEecCcchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337 82 CVFISAASGAVGQLVGQFAKLLG---CYVVGS-AGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV 157 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G---~~V~~~-~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 157 (269)
+|.|.|+ |.+|.+.+.-+...| .+|+.+ .+++++.+.+.++++...... +..+.+++ .|++|-|+
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----advvilav 69 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-----DNEEAAQE-----ADVVILAV 69 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-----EHHHHHHH-----TSEEEE-S
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-----ChHHhhcc-----CCEEEEEE
Confidence 4778887 999999999999999 799955 999999988875777543221 22333433 79999999
Q ss_pred CchhHhhhHhhh---hcCCEEEEE
Q 024337 158 GGKTLDAVLPNM---KIRGRIAAC 178 (269)
Q Consensus 158 g~~~~~~~~~~l---~~~G~~v~~ 178 (269)
....+...++.+ .++..++.+
T Consensus 70 ~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 70 KPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhhccCCCEEEEe
Confidence 986665555544 345555544
No 385
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.97 E-value=0.014 Score=47.68 Aligned_cols=75 Identities=15% Similarity=0.086 Sum_probs=50.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCCCCccEEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFPEGIDVYF 154 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~~~~d~vi 154 (269)
++++++|+|+ ||.+.+++..+...|+ +++++.|+.++.+.+.+.+... ..+...+..++.+.+ ..+|+++
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~-----~~~divI 199 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVI-----AAADGVV 199 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHH-----hhcCEEE
Confidence 4678999998 9999999999888998 8999999988877765454321 011111100111111 2489999
Q ss_pred eCCCc
Q 024337 155 ENVGG 159 (269)
Q Consensus 155 d~~g~ 159 (269)
||++-
T Consensus 200 NaTp~ 204 (283)
T PRK14027 200 NATPM 204 (283)
T ss_pred EcCCC
Confidence 99973
No 386
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.97 E-value=0.0043 Score=52.32 Aligned_cols=76 Identities=16% Similarity=0.242 Sum_probs=50.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC----c-eeEecCChhhHHHHHHHHCCC-CccE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF----D-EAFNYKEEADLNAALKRYFPE-GIDV 152 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~----~-~~~~~~~~~~~~~~i~~~~~~-~~d~ 152 (269)
++++|||+||+|.+|..+++.+...|.+|++++++........+.++. . ...|..+. + .+.+...+ ++|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~---~~~~~~~~~~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA-A---KLRKAIAEFKPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH-H---HHHHHHhhcCCCE
Confidence 468999999999999999999999999999998776543322112221 1 12243332 2 22232223 6899
Q ss_pred EEeCCC
Q 024337 153 YFENVG 158 (269)
Q Consensus 153 vid~~g 158 (269)
||.+++
T Consensus 79 vih~A~ 84 (349)
T TIGR02622 79 VFHLAA 84 (349)
T ss_pred EEECCc
Confidence 999997
No 387
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=96.96 E-value=0.019 Score=45.67 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=71.7
Q ss_pred HHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHH
Q 024337 71 FYEVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRY 145 (269)
Q Consensus 71 l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~ 145 (269)
|....+..+.++||-.| +.+|+.++.+|+.+ +.+|+.+..+++..+.+++ +.|...-++.... +..+.+.++
T Consensus 71 L~~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l 147 (247)
T PLN02589 71 LNMLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQM 147 (247)
T ss_pred HHHHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHH
Confidence 43446667788999998 58899999999886 4699999999887777654 4465443443333 444555543
Q ss_pred C-----CCCccEEE-eCCCc---hhHhhhHhhhhcCCEEEE
Q 024337 146 F-----PEGIDVYF-ENVGG---KTLDAVLPNMKIRGRIAA 177 (269)
Q Consensus 146 ~-----~~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~ 177 (269)
. .+.||+|| |+--. ..++.++++|++||.++.
T Consensus 148 ~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 148 IEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred HhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 2 24799775 44433 567788999999997764
No 388
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.95 E-value=0.0069 Score=48.24 Aligned_cols=81 Identities=20% Similarity=0.269 Sum_probs=50.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---cCCce---eEecCChhhHHHHHHHHCC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKVDLLKNK---FGFDE---AFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~-s~~~~~~~~~~---~g~~~---~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
++++++|+|++|++|..+++.+...|++|+++.+ ++++.+...+. .+... ..|..+...+.+.+.+... +.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999889999987654 34443332212 23221 2344433133333333321 36
Q ss_pred ccEEEeCCCc
Q 024337 150 IDVYFENVGG 159 (269)
Q Consensus 150 ~d~vid~~g~ 159 (269)
+|+++.++|.
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 389
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.95 E-value=0.0076 Score=49.39 Aligned_cols=96 Identities=10% Similarity=0.082 Sum_probs=57.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHcCC---c---eeEecCChhhHHHHHHHHCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK---DKVDLLKNKFGF---D---EAFNYKEEADLNAALKRYFPE 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~---~~~~~~~~~~g~---~---~~~~~~~~~~~~~~i~~~~~~ 148 (269)
++++++|+|+ ||+|.+++..+...|+ +|+++.|+. ++.+.+.+++.. . ...+..+. +.+.+.. .
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~----~~~~~~~-~ 198 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDT----EKLKAEI-A 198 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhh----hHHHhhh-c
Confidence 4689999999 8999999998889999 599999985 454443324421 1 11222221 1222211 1
Q ss_pred CccEEEeCCCchhH------hh-hHhhhhcCCEEEEEec
Q 024337 149 GIDVYFENVGGKTL------DA-VLPNMKIRGRIAACGM 180 (269)
Q Consensus 149 ~~d~vid~~g~~~~------~~-~~~~l~~~G~~v~~g~ 180 (269)
.+|++++|++-... .. ....+.++..++.+-.
T Consensus 199 ~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY 237 (289)
T PRK12548 199 SSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVY 237 (289)
T ss_pred cCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecC
Confidence 47999999963111 01 1344666666665533
No 390
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.94 E-value=0.0077 Score=47.64 Aligned_cols=70 Identities=19% Similarity=0.308 Sum_probs=51.1
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHcCCcee-EecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KVDLLKNKFGFDEA-FNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~--~~~~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
|+|+||+|.+|..+++.+...+.+|.+.+|+.. ..+.++ ..|+..+ .|+.+. +.+.+... ++|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~~----~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDDP----ESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-H----HHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCCH----HHHHHHHc-CCceEEeecC
Confidence 789999999999999999998999999998764 355666 7788532 334332 33333222 6999999998
No 391
>PRK07578 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.013 Score=45.06 Aligned_cols=87 Identities=16% Similarity=0.157 Sum_probs=56.9
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch-
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK- 160 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~- 160 (269)
+++|.|+++++|..++..+... .+|+.++++.. ...+|..+.++..+.+.+. +++|+++.++|..
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~id~lv~~ag~~~ 67 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKV--GKVDAVVSAAGKVH 67 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhc--CCCCEEEECCCCCC
Confidence 6899999999999988888777 99999987643 1233444431333333332 3689999988731
Q ss_pred -------------------------hHhhhHhhhhcCCEEEEEeccc
Q 024337 161 -------------------------TLDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 161 -------------------------~~~~~~~~l~~~G~~v~~g~~~ 182 (269)
..+.+++.+.++|+++.++...
T Consensus 68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~ 114 (199)
T PRK07578 68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL 114 (199)
T ss_pred CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence 0233344556678888876543
No 392
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.93 E-value=0.0058 Score=49.40 Aligned_cols=79 Identities=16% Similarity=0.155 Sum_probs=49.5
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHcC----Cc---eeEecCChhhH---HHH-HHHHC--
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKVDLLKNKFG----FD---EAFNYKEEADL---NAA-LKRYF-- 146 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s-~~~~~~~~~~~g----~~---~~~~~~~~~~~---~~~-i~~~~-- 146 (269)
.+++|+||++++|..+++.+...|++|+++++. +++.+.+.+++. .. ...|..+.+.. .+. +.+..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 478999999999999999999999999988653 444443322332 11 12344443111 122 22221
Q ss_pred CCCccEEEeCCCc
Q 024337 147 PEGIDVYFENVGG 159 (269)
Q Consensus 147 ~~~~d~vid~~g~ 159 (269)
-+++|+++.++|.
T Consensus 82 ~g~iD~lv~nAG~ 94 (267)
T TIGR02685 82 FGRCDVLVNNASA 94 (267)
T ss_pred cCCceEEEECCcc
Confidence 1379999999883
No 393
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.93 E-value=0.0099 Score=50.93 Aligned_cols=90 Identities=17% Similarity=0.209 Sum_probs=58.5
Q ss_pred EEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHc-CCc---eeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 83 VFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKF-GFD---EAFNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~-g~~---~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
|+|+|+ |.+|..+++.+...+- +|++.+++.++.+.+.+++ +.. ..+|..+..+ +.+... +.|+|++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPES----LAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHH----HHHHHT-TSSEEEE-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHH----HHHHHh-cCCEEEEC
Confidence 789999 9999999999987764 8999999999987776342 221 2445544312 333322 46999999
Q ss_pred CCc-hhHhhhHhhhhcCCEEEEE
Q 024337 157 VGG-KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 157 ~g~-~~~~~~~~~l~~~G~~v~~ 178 (269)
+|. .....+..+++.+-.++..
T Consensus 75 ~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CccchhHHHHHHHHHhCCCeecc
Confidence 997 4555566667778888874
No 394
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=96.92 E-value=0.0025 Score=46.40 Aligned_cols=96 Identities=16% Similarity=0.180 Sum_probs=64.6
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCCh-----hhHHHHHHHHCCC-CccEE
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE-----ADLNAALKRYFPE-GIDVY 153 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~i~~~~~~-~~d~v 153 (269)
..+|+|+|+-|.+|.++++..|..++-|.-++.++.+.. ...-+++.+.. ....+++-+...+ ++|.|
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc------cceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 357999999999999999999999998888886654222 12224443331 0223334444555 99999
Q ss_pred EeCCCch---h------------------------HhhhHhhhhcCCEEEEEecc
Q 024337 154 FENVGGK---T------------------------LDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 154 id~~g~~---~------------------------~~~~~~~l~~~G~~v~~g~~ 181 (269)
|+-+|+- . ...+-..|+++|-+-+.|..
T Consensus 77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk 131 (236)
T KOG4022|consen 77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK 131 (236)
T ss_pred EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc
Confidence 9988751 0 13455678899988777653
No 395
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.91 E-value=0.0067 Score=50.19 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=50.7
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HcCCce---eEecCChhhHHHHHHHHC-CCCc
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKN---KFGFDE---AFNYKEEADLNAALKRYF-PEGI 150 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~~---~~g~~~---~~~~~~~~~~~~~i~~~~-~~~~ 150 (269)
++++++|+||++++|...++.+...|++|++.+++. ++.+.+.+ ..|... ..|..+.++....+.... -+++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999988643 23322221 223221 223433312222222211 2479
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|++|+++|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999999984
No 396
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.90 E-value=0.0092 Score=52.75 Aligned_cols=73 Identities=15% Similarity=0.138 Sum_probs=54.1
Q ss_pred cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337 76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE 155 (269)
Q Consensus 76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 155 (269)
.+.++++|+|+|. |..|++++++++..|++|++.+..+++.+.++ ++|+. ++... ...+.+. .+|+|+.
T Consensus 8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~-~~~~~---~~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVA-TVSTS---DAVQQIA-----DYALVVT 76 (488)
T ss_pred cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCE-EEcCc---chHhHhh-----cCCEEEE
Confidence 3567899999998 99999999999999999999997766666666 67773 33221 1112222 3799999
Q ss_pred CCCc
Q 024337 156 NVGG 159 (269)
Q Consensus 156 ~~g~ 159 (269)
+.|-
T Consensus 77 SpGi 80 (488)
T PRK03369 77 SPGF 80 (488)
T ss_pred CCCC
Confidence 8884
No 397
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.88 E-value=0.0076 Score=48.12 Aligned_cols=75 Identities=19% Similarity=0.281 Sum_probs=50.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHC--CCCccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYF--PEGIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~v 153 (269)
++++++|+|++|++|..+++.+...|++|++++++. .. ..+.. ...|..+.+++.+.+.+.. .+++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999999999999999999999875 22 22221 1234444313333333321 1368999
Q ss_pred EeCCCc
Q 024337 154 FENVGG 159 (269)
Q Consensus 154 id~~g~ 159 (269)
|.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 999884
No 398
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0083 Score=47.79 Aligned_cols=80 Identities=20% Similarity=0.220 Sum_probs=50.5
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHCC--CCc
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYFP--EGI 150 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~~--~~~ 150 (269)
+.+++|+|++|++|..+++.+...|++|+.+. +++++.+...+ ..+.. ...|..+..++.+.+.+... +++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999988999887765 34444333221 22332 12344443233333333221 378
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|+++.++|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999984
No 399
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.86 E-value=0.011 Score=44.83 Aligned_cols=39 Identities=18% Similarity=0.183 Sum_probs=32.8
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~ 121 (269)
+|.|.|+ |.+|...+.++...|.+|...+.+++..+..+
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhh
Confidence 5889998 99999999999999999999999999776554
No 400
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.86 E-value=0.0087 Score=47.68 Aligned_cols=79 Identities=22% Similarity=0.154 Sum_probs=49.6
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHC--CCCcc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
++++|.||+|++|..+++.+...|++|+++. +++++.+...+ ..+.. . ..|..+..+..+.+.+.. -+++|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 5899999999999999999999999987765 45444333221 22322 1 234443323333333322 13699
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
++|.++|.
T Consensus 83 ~li~~ag~ 90 (248)
T PRK06947 83 ALVNNAGI 90 (248)
T ss_pred EEEECCcc
Confidence 99999973
No 401
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.84 E-value=0.0094 Score=47.30 Aligned_cols=80 Identities=21% Similarity=0.299 Sum_probs=50.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HcCCc-e--eEecCChhhHHHHHHHHCC--CC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKN---KFGFD-E--AFNYKEEADLNAALKRYFP--EG 149 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~---~~g~~-~--~~~~~~~~~~~~~i~~~~~--~~ 149 (269)
+.++++|+||+|++|..+++.+...|.+|+++.++.+ ..+.+.+ ..+.. . ..|..+..++.+.+.+... ++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999887665544 2222221 22221 1 2344443133333332211 36
Q ss_pred ccEEEeCCC
Q 024337 150 IDVYFENVG 158 (269)
Q Consensus 150 ~d~vid~~g 158 (269)
+|.+|.++|
T Consensus 85 id~vi~~ag 93 (249)
T PRK12825 85 IDILVNNAG 93 (249)
T ss_pred CCEEEECCc
Confidence 999999988
No 402
>PLN02244 tocopherol O-methyltransferase
Probab=96.82 E-value=0.0095 Score=50.05 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=65.3
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFPEGIDVYF 154 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 154 (269)
+++++||-+|+ |.|..+..+++..|++|++++.++...+.+++. .+...-+..... +..+ + ....+.||+|+
T Consensus 117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~-~-~~~~~~FD~V~ 191 (340)
T PLN02244 117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN-Q-PFEDGQFDLVW 191 (340)
T ss_pred CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc-C-CCCCCCccEEE
Confidence 67889999986 667888889988899999999999887766532 233211111111 1110 0 01224799998
Q ss_pred eCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337 155 ENVGG-------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 155 d~~g~-------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
..... ..+.++.+.|+++|+++....
T Consensus 192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 64432 357788999999999998754
No 403
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.80 E-value=0.0034 Score=46.79 Aligned_cols=92 Identities=21% Similarity=0.264 Sum_probs=62.4
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--ceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF--DEAFNYKEEADLNAALKRYFPEGIDVYFENVGG 159 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~--~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 159 (269)
+|.|+||+|-+|....+=|+..|-+|+++.|++.+....+ ...+ ..++|.. ...+.+ .++|+||++.|.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd~~---~~a~~l-----~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFDLT---SLASDL-----AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccChh---hhHhhh-----cCCceEEEeccC
Confidence 6899999999999999999999999999999998876543 2211 1233322 112222 269999999885
Q ss_pred h----------hHhhhHhhhhcC--CEEEEEeccc
Q 024337 160 K----------TLDAVLPNMKIR--GRIAACGMIS 182 (269)
Q Consensus 160 ~----------~~~~~~~~l~~~--G~~v~~g~~~ 182 (269)
. ..+..+..|+.- -|++.+|.-+
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 2 123345555552 4777777643
No 404
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=96.79 E-value=0.016 Score=46.53 Aligned_cols=97 Identities=13% Similarity=0.152 Sum_probs=63.8
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEGIDVYF 154 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 154 (269)
.++.+||-.|+ |.|..+..+++. |.+|++++.+++..+.+++.+ |...-+..... +..+ +.....+.||+|+
T Consensus 43 ~~~~~vLDiGc--G~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~~-l~~~~~~~fD~V~ 117 (255)
T PRK11036 43 PRPLRVLDAGG--GEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQD-IAQHLETPVDLIL 117 (255)
T ss_pred CCCCEEEEeCC--CchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHHH-HhhhcCCCCCEEE
Confidence 45678998885 678888888875 889999999999888877433 22111111111 2211 2222234799998
Q ss_pred eCCC-----c--hhHhhhHhhhhcCCEEEEEe
Q 024337 155 ENVG-----G--KTLDAVLPNMKIRGRIAACG 179 (269)
Q Consensus 155 d~~g-----~--~~~~~~~~~l~~~G~~v~~g 179 (269)
.... . ..+..+.+.|+++|.++.+-
T Consensus 118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 6533 1 45788999999999998653
No 405
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=96.78 E-value=0.012 Score=47.24 Aligned_cols=43 Identities=23% Similarity=0.290 Sum_probs=34.5
Q ss_pred EEEEecCcchHHHHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHc
Q 024337 82 CVFISAASGAVGQLVGQFAKL----LGCYVVGSAGSKDKVDLLKNKF 124 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~----~G~~V~~~~~s~~~~~~~~~~~ 124 (269)
.++|+|+++++|..++..+.. .|++|+.+.+++++.+.+.+++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l 48 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI 48 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence 589999999999988876654 7999999999988776654333
No 406
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=96.78 E-value=0.018 Score=46.83 Aligned_cols=73 Identities=18% Similarity=0.207 Sum_probs=47.5
Q ss_pred EEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcC----Ccee--------EecCChhhHHHHHHHHCCC-
Q 024337 83 VFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFG----FDEA--------FNYKEEADLNAALKRYFPE- 148 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g----~~~~--------~~~~~~~~~~~~i~~~~~~- 148 (269)
|||+||+|.+|...++.+...+. +++++++++.++-.+++++. ...+ -|.+ ..+.+.+....
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr----d~~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR----DKERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC----HHHHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc----CHHHHHHHHhhc
Confidence 79999999999999988888886 89999999998777766662 1111 1222 23455555555
Q ss_pred CccEEEeCCCc
Q 024337 149 GIDVYFENVGG 159 (269)
Q Consensus 149 ~~d~vid~~g~ 159 (269)
++|+||.++.-
T Consensus 77 ~pdiVfHaAA~ 87 (293)
T PF02719_consen 77 KPDIVFHAAAL 87 (293)
T ss_dssp T-SEEEE----
T ss_pred CCCEEEEChhc
Confidence 89999998874
No 407
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.77 E-value=0.081 Score=43.97 Aligned_cols=40 Identities=18% Similarity=-0.012 Sum_probs=34.7
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~ 120 (269)
-++|.|.|+ |.+|...++.+...|.+|++.+.+++..+.+
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAAL 46 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 367999998 9999999999999999999999998765543
No 408
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.76 E-value=0.011 Score=46.89 Aligned_cols=79 Identities=14% Similarity=0.133 Sum_probs=51.1
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--CCCcc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~-~~s~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
++++|+||+|++|...++.+...|++|+++ .+++++.+.... ..+.. ...|..+.++..+.+.+.. .+++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 479999999999999999998899998774 455554433221 22321 1335544423333344332 24799
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
+++.++|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999984
No 409
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0093 Score=47.86 Aligned_cols=81 Identities=16% Similarity=0.155 Sum_probs=50.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHH---HcCCc---eeEecCChhhHHHHHHHHC--
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS----KDKVDLLKN---KFGFD---EAFNYKEEADLNAALKRYF-- 146 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s----~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~i~~~~-- 146 (269)
.+.+++|+|++|++|..+++.+...|++|++++++ .+..+.+.+ ..+.. ...|..+..+..+.+.+..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999997777543 222222211 22322 1235544323333333322
Q ss_pred CCCccEEEeCCCc
Q 024337 147 PEGIDVYFENVGG 159 (269)
Q Consensus 147 ~~~~d~vid~~g~ 159 (269)
.+++|++|+++|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 1379999999984
No 410
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=96.74 E-value=0.016 Score=48.37 Aligned_cols=76 Identities=13% Similarity=0.124 Sum_probs=49.4
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHcCCc--e--eEecCChhhHHHHHHHHCCCCccE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKFGFD--E--AFNYKEEADLNAALKRYFPEGIDV 152 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~g~~--~--~~~~~~~~~~~~~i~~~~~~~~d~ 152 (269)
++.+|||+||+|.+|..+++.+...| .+|++++++..+...+.+.+... . ..|..+. + .+.+... ++|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~---~l~~~~~-~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK-E---RLTRALR-GVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH-H---HHHHHHh-cCCE
Confidence 46889999999999999999887765 68998887766544333233221 1 2244443 2 2222221 4899
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
+|.++|.
T Consensus 78 Vih~Ag~ 84 (324)
T TIGR03589 78 VVHAAAL 84 (324)
T ss_pred EEECccc
Confidence 9999873
No 411
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.74 E-value=0.043 Score=42.35 Aligned_cols=80 Identities=19% Similarity=0.289 Sum_probs=55.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
++.+++|.|. |.+|..+++.+...|++|+++++++++.+.+.+.+++. .++.. ++ ....+|+++-|+.
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~---~l-------~~~~~Dv~vp~A~ 94 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE---EI-------YSVDADVFAPCAL 94 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch---hh-------ccccCCEEEeccc
Confidence 5789999998 89999999999999999999998888877776465643 33221 11 1115899997665
Q ss_pred c-hhHhhhHhhhh
Q 024337 159 G-KTLDAVLPNMK 170 (269)
Q Consensus 159 ~-~~~~~~~~~l~ 170 (269)
+ ..-...++.|+
T Consensus 95 ~~~I~~~~~~~l~ 107 (200)
T cd01075 95 GGVINDDTIPQLK 107 (200)
T ss_pred ccccCHHHHHHcC
Confidence 4 23333344453
No 412
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.0083 Score=47.19 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=50.9
Q ss_pred EEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCc-e--eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 84 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--GFD-E--AFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 84 lI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~--g~~-~--~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
+|+||+|++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+..++...+.+ . +++|.+++++|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~-~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE-A-GPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh-c-CCCCEEEECCC
Confidence 58999999999999999999999999999877765544233 221 1 2354444133333332 2 36899999987
Q ss_pred c
Q 024337 159 G 159 (269)
Q Consensus 159 ~ 159 (269)
.
T Consensus 79 ~ 79 (230)
T PRK07041 79 D 79 (230)
T ss_pred C
Confidence 4
No 413
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=96.73 E-value=0.026 Score=45.55 Aligned_cols=98 Identities=18% Similarity=0.194 Sum_probs=66.4
Q ss_pred hcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHcCC------c--eeEecCChhhHHHHHHH
Q 024337 75 CSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKFGF------D--EAFNYKEEADLNAALKR 144 (269)
Q Consensus 75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~g~------~--~~~~~~~~~~~~~~i~~ 144 (269)
..+.++++||-.|+ |.|..+..+++..+ .+|++++.+++..+.++++... . ..+..+.. + + .
T Consensus 69 ~~~~~~~~VLDlGc--GtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~-~----l-p 140 (261)
T PLN02233 69 SGAKMGDRVLDLCC--GSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDAT-D----L-P 140 (261)
T ss_pred hCCCCCCEEEEECC--cCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccc-c----C-C
Confidence 46788999999997 55677788888765 5999999999998888643321 1 11111110 1 1 0
Q ss_pred HCCCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337 145 YFPEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 145 ~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
..++.||.|+...+- ..++++.+.|+|+|+++....
T Consensus 141 ~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~ 183 (261)
T PLN02233 141 FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDF 183 (261)
T ss_pred CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence 112379999765431 457899999999999988765
No 414
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.013 Score=46.63 Aligned_cols=77 Identities=18% Similarity=0.167 Sum_probs=50.1
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHH----H-CC-CCcc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKR----Y-FP-EGID 151 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~----~-~~-~~~d 151 (269)
.+++|+||+|++|..+++.+...|++|++++++.++. ... ..+.. ...|..+.+++...+.+ . .. ++.|
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRV 79 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCce
Confidence 3799999999999999999988999999999875532 222 33322 13455543233332222 1 22 2689
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
.++.+.|.
T Consensus 80 ~~v~~ag~ 87 (243)
T PRK07023 80 LLINNAGT 87 (243)
T ss_pred EEEEcCcc
Confidence 99998873
No 415
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.72 E-value=0.035 Score=46.10 Aligned_cols=87 Identities=23% Similarity=0.194 Sum_probs=64.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.|+++.|.|- |.+|.+.++.++.+|++|+...++.. .+..+ .+++.++ ++.+.+++ .|++.-+++
T Consensus 145 ~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~y~-------~l~ell~~-----sDii~l~~P 209 (324)
T COG1052 145 RGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGARYV-------DLDELLAE-----SDIISLHCP 209 (324)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCceec-------cHHHHHHh-----CCEEEEeCC
Confidence 4889999997 99999999999999999999998865 22222 4444432 34444443 788877776
Q ss_pred c--hh----HhhhHhhhhcCCEEEEEec
Q 024337 159 G--KT----LDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 159 ~--~~----~~~~~~~l~~~G~~v~~g~ 180 (269)
. ++ -...+..|++++.+|.++.
T Consensus 210 lt~~T~hLin~~~l~~mk~ga~lVNtaR 237 (324)
T COG1052 210 LTPETRHLINAEELAKMKPGAILVNTAR 237 (324)
T ss_pred CChHHhhhcCHHHHHhCCCCeEEEECCC
Confidence 3 22 2467888999999998866
No 416
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.72 E-value=0.025 Score=45.94 Aligned_cols=93 Identities=18% Similarity=0.136 Sum_probs=65.1
Q ss_pred cCCcchhHHHHHHHhhcC-CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhH
Q 024337 60 LGMPGMTAYVGFYEVCSA-KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL 138 (269)
Q Consensus 60 l~~~~~~a~~~l~~~~~~-~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~ 138 (269)
+||+....+..+ +..++ -.|.+++|.|.+.-+|.-+++++...|++|++..+... ++
T Consensus 138 ~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l 195 (286)
T PRK14175 138 VPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM 195 (286)
T ss_pred CCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence 455555555555 33332 47899999999666999999999999999998874321 23
Q ss_pred HHHHHHHCCCCccEEEeCCCch-hHhhhHhhhhcCCEEEEEecc
Q 024337 139 NAALKRYFPEGIDVYFENVGGK-TLDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 139 ~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~ 181 (269)
.+.++ ..|++|.++|.. .+.. +.++++..++.+|..
T Consensus 196 ~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~ 232 (286)
T PRK14175 196 ASYLK-----DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT 232 (286)
T ss_pred HHHHh-----hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence 33333 379999999974 3333 468888888888774
No 417
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.72 E-value=0.0084 Score=46.75 Aligned_cols=100 Identities=13% Similarity=0.096 Sum_probs=63.9
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeE---------ecCChhhHHHHHHHHC--
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAF---------NYKEEADLNAALKRYF-- 146 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~i~~~~-- 146 (269)
.++.+||+.|+ |.|.-++-+|. +|.+|++++.|+...+.+.++.+..... ....-.-....+.+..
T Consensus 33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 57789999997 67888888875 6999999999999888764344432100 0000000000111111
Q ss_pred -CCCccEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337 147 -PEGIDVYFENVGG---------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 147 -~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
.+.||.++|+.-- ..+....++|+++|+++....
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 1368999997641 346788999999998776654
No 418
>PLN00016 RNA-binding protein; Provisional
Probab=96.72 E-value=0.019 Score=49.10 Aligned_cols=97 Identities=19% Similarity=0.182 Sum_probs=62.4
Q ss_pred CCCCEEEEe----cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-----------HHHHcCCceeEecCChhhHHHHH
Q 024337 78 KHGECVFIS----AASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL-----------LKNKFGFDEAFNYKEEADLNAAL 142 (269)
Q Consensus 78 ~~~~~vlI~----ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~i 142 (269)
....+|||+ ||+|-+|..++..+...|.+|++++++...... +. ..+.. .+-. +..+ +
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~-~v~~----D~~d-~ 122 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVK-TVWG----DPAD-V 122 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCce-EEEe----cHHH-H
Confidence 345789999 999999999999999899999999988654221 11 22332 2212 2222 2
Q ss_pred HHHCCC-CccEEEeCCCc--hhHhhhHhhhhcC--CEEEEEecc
Q 024337 143 KRYFPE-GIDVYFENVGG--KTLDAVLPNMKIR--GRIAACGMI 181 (269)
Q Consensus 143 ~~~~~~-~~d~vid~~g~--~~~~~~~~~l~~~--G~~v~~g~~ 181 (269)
.+.... ++|+|+++.+. ......++.++.. .++|.++..
T Consensus 123 ~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 123 KSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred HhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 222223 79999999875 3344555555543 378877654
No 419
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.70 E-value=0.01 Score=47.63 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=30.8
Q ss_pred CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCC
Q 024337 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGS 113 (269)
Q Consensus 79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s 113 (269)
++++++|+||+ |++|...+..+...|++|++++++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 45789999998 489999999988899999999876
No 420
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.70 E-value=0.02 Score=47.47 Aligned_cols=89 Identities=18% Similarity=0.303 Sum_probs=60.1
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.+|.|+|+ |.+|.+.++.++..|. +|++.++++++.+.++ +.|...... . +..+.+ ..+|+|+.|++
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~--~--~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT--T--SAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec--C--CHHHHh-----cCCCEEEECCC
Confidence 67999997 9999999999988885 8999999999888887 777532111 1 222222 24899999998
Q ss_pred chh----HhhhHhhhhcCCEEEEEec
Q 024337 159 GKT----LDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 159 ~~~----~~~~~~~l~~~G~~v~~g~ 180 (269)
... +......++++..++.++.
T Consensus 76 ~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 633 2333344556665555544
No 421
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.68 E-value=0.07 Score=45.56 Aligned_cols=93 Identities=24% Similarity=0.335 Sum_probs=64.6
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
-.+.++||.|+ |-+|..++..+...|. +|++..|+.++.+.+.+++|.. +...+ +....+. .+|+||.+
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---el~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---ELLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---HHHHhhh-----hCCEEEEe
Confidence 36889999999 9999999999999996 8999999999887766699953 32222 3333343 38999999
Q ss_pred CCchh----HhhhHhhhhcCCE--EEEEec
Q 024337 157 VGGKT----LDAVLPNMKIRGR--IAACGM 180 (269)
Q Consensus 157 ~g~~~----~~~~~~~l~~~G~--~v~~g~ 180 (269)
+|... .....+.++..-+ ++.++.
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence 99632 2334444454333 344444
No 422
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.68 E-value=0.0088 Score=46.21 Aligned_cols=91 Identities=10% Similarity=0.018 Sum_probs=56.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHcCCceeEecCChhhHHH-HHHHHCCCCccEEEeC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEADLNA-ALKRYFPEGIDVYFEN 156 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~~~g~~~~~~~~~~~~~~~-~i~~~~~~~~d~vid~ 156 (269)
.+.+|+|.|| |.+|...++.+...|++|+++.+... ....+. .-+. -.+... .+.+ .+ .++|+||-|
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~-i~~~~~---~~~~~~l-----~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGK-IRWKQK---EFEPSDI-----VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCC-EEEEec---CCChhhc-----CCceEEEEc
Confidence 5789999999 99999999988889999998875432 222222 1121 111111 1111 11 258999999
Q ss_pred CCchhHhhhHhhhhcCCEEEEEec
Q 024337 157 VGGKTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 157 ~g~~~~~~~~~~l~~~G~~v~~g~ 180 (269)
++...++..+......+.++....
T Consensus 78 T~d~elN~~i~~~a~~~~lvn~~d 101 (202)
T PRK06718 78 TNDPRVNEQVKEDLPENALFNVIT 101 (202)
T ss_pred CCCHHHHHHHHHHHHhCCcEEECC
Confidence 998666555554444455665533
No 423
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=96.67 E-value=0.008 Score=46.22 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=62.1
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCCCC
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFPEG 149 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~~ 149 (269)
......++.+||-.|+ |.|..+..+++ .|.+|++++.+++..+.+++. .+.. +..... +... . . .++.
T Consensus 24 ~~~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~-~-~-~~~~ 94 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA-A-A-LNED 94 (195)
T ss_pred HHhccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh-c-c-ccCC
Confidence 3344556678999996 67888888887 588999999998877766522 2222 111111 1110 0 0 1236
Q ss_pred ccEEEeCCC-----c----hhHhhhHhhhhcCCEEEEEec
Q 024337 150 IDVYFENVG-----G----KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 150 ~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 180 (269)
||+|+.+.- . ..+..+.+.|+++|.++.+..
T Consensus 95 fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~ 134 (195)
T TIGR00477 95 YDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA 134 (195)
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 999976532 1 356788889999999665543
No 424
>PLN03075 nicotianamine synthase; Provisional
Probab=96.67 E-value=0.023 Score=46.32 Aligned_cols=97 Identities=11% Similarity=0.022 Sum_probs=66.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCC----ceeEecCChhhHHHHHHHHCCCCccE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKFGF----DEAFNYKEEADLNAALKRYFPEGIDV 152 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~~~~d~ 152 (269)
+.++|+-.|. |+.|+.++.+++.+ +.+++.++.+++..+.+++.+.. ...+..... +..+.... .++||+
T Consensus 123 ~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~--l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTES--LKEYDV 198 (296)
T ss_pred CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhcccc--cCCcCE
Confidence 7799999996 88898888888655 45899999999998888754422 222222222 22221111 247999
Q ss_pred EEeCC------Cc--hhHhhhHhhhhcCCEEEEEe
Q 024337 153 YFENV------GG--KTLDAVLPNMKIRGRIAACG 179 (269)
Q Consensus 153 vid~~------g~--~~~~~~~~~l~~~G~~v~~g 179 (269)
||..+ .. ..+....+.|++||.++.-.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 98875 22 56788999999999888654
No 425
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.67 E-value=0.016 Score=48.26 Aligned_cols=93 Identities=17% Similarity=0.197 Sum_probs=62.2
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEe
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKL-LGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFE 155 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~-~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid 155 (269)
-.+.+|+|+||+|.+|..+++.+.. .|. +++.+.++.++...+.++++...+. ++.+.+. ..|+|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~-----~aDiVv~ 221 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALP-----EADIVVW 221 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHc-----cCCEEEE
Confidence 3678999999999999999988864 565 8999999888877766455422111 2222222 4899999
Q ss_pred CCCc-hhHhhhHhhhhcCCEEEEEecc
Q 024337 156 NVGG-KTLDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 156 ~~g~-~~~~~~~~~l~~~G~~v~~g~~ 181 (269)
+++. ..+..-.+.+++.-.++.++.+
T Consensus 222 ~ts~~~~~~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 222 VASMPKGVEIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred CCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence 9986 3322222455666666666654
No 426
>PRK00536 speE spermidine synthase; Provisional
Probab=96.66 E-value=0.0073 Score=48.39 Aligned_cols=99 Identities=17% Similarity=0.030 Sum_probs=65.6
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-ceeEecCChhhHHHHHHHHCCCCccEE-Ee
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGF-DEAFNYKEEADLNAALKRYFPEGIDVY-FE 155 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~~~d~v-id 155 (269)
...++|||.|| |=|..+-.++|+-. +|..+.-+++-.+.+++-+.. ...++.-.- .+...+.+...+.||+| +|
T Consensus 71 ~~pk~VLIiGG--GDGg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv-~l~~~~~~~~~~~fDVIIvD 146 (262)
T PRK00536 71 KELKEVLIVDG--FDLELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKNF-THAKQLLDLDIKKYDLIICL 146 (262)
T ss_pred CCCCeEEEEcC--CchHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCE-EEeehhhhccCCcCCEEEEc
Confidence 44589999995 66888889999865 999999898888888832332 111221111 11122333333579966 55
Q ss_pred CCCc-hhHhhhHhhhhcCCEEEEEec
Q 024337 156 NVGG-KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 156 ~~g~-~~~~~~~~~l~~~G~~v~~g~ 180 (269)
..-. +.++.+.+.|+++|.++.-+.
T Consensus 147 s~~~~~fy~~~~~~L~~~Gi~v~Qs~ 172 (262)
T PRK00536 147 QEPDIHKIDGLKRMLKEDGVFISVAK 172 (262)
T ss_pred CCCChHHHHHHHHhcCCCcEEEECCC
Confidence 4544 677889999999999987543
No 427
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.66 E-value=0.015 Score=46.05 Aligned_cols=79 Identities=14% Similarity=0.177 Sum_probs=49.7
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHcC---Cc-e--eEecCChhhHHHHHHHHC--CCCcc
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKFG---FD-E--AFNYKEEADLNAALKRYF--PEGID 151 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~~~g---~~-~--~~~~~~~~~~~~~i~~~~--~~~~d 151 (269)
++++|+|++|++|..+++.+...|++|+.++++.+ ..+...+.+. .. . ..|..+.+...+.+.+.. -+++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999999999999999888999999998743 1221211222 11 1 234444312333233221 13699
Q ss_pred EEEeCCCc
Q 024337 152 VYFENVGG 159 (269)
Q Consensus 152 ~vid~~g~ 159 (269)
+++.++|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12824 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999974
No 428
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.65 E-value=0.069 Score=37.06 Aligned_cols=92 Identities=20% Similarity=0.133 Sum_probs=62.6
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCch--
Q 024337 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGGK-- 160 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-- 160 (269)
|+|.|. |.+|...++.++..+.+|++++.++++.+.++ +.|.. ++..+. .-.+.+++..-..++.++-+++.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~~-~i~gd~--~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGVE-VIYGDA--TDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTSE-EEES-T--TSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hcccc-cccccc--hhhhHHhhcCccccCEEEEccCCHHH
Confidence 578898 99999999999997779999999999999998 77754 444333 223344444333789999888863
Q ss_pred h--HhhhHhhhhcCCEEEEEe
Q 024337 161 T--LDAVLPNMKIRGRIAACG 179 (269)
Q Consensus 161 ~--~~~~~~~l~~~G~~v~~g 179 (269)
. +....+.+.+..+++...
T Consensus 76 n~~~~~~~r~~~~~~~ii~~~ 96 (116)
T PF02254_consen 76 NLLIALLARELNPDIRIIARV 96 (116)
T ss_dssp HHHHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEEE
Confidence 2 223444455666766543
No 429
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.014 Score=46.37 Aligned_cols=81 Identities=22% Similarity=0.232 Sum_probs=49.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHH---cCCc-e--eEecCChhhHHHHHHHHC--
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG----SKDKVDLLKNK---FGFD-E--AFNYKEEADLNAALKRYF-- 146 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~----s~~~~~~~~~~---~g~~-~--~~~~~~~~~~~~~i~~~~-- 146 (269)
++.+++|+||+|++|...++.+...|++|+++.+ +.++.+.+.++ .+.. . ..|..+.......+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999899999988664 33333322212 2222 1 234443312223232221
Q ss_pred CCCccEEEeCCCc
Q 024337 147 PEGIDVYFENVGG 159 (269)
Q Consensus 147 ~~~~d~vid~~g~ 159 (269)
.+++|.+|.++|.
T Consensus 85 ~~~~d~vi~~ag~ 97 (249)
T PRK12827 85 FGRLDILVNNAGI 97 (249)
T ss_pred hCCCCEEEECCCC
Confidence 1369999999984
No 430
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.61 E-value=0.011 Score=49.16 Aligned_cols=39 Identities=15% Similarity=0.267 Sum_probs=33.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~ 117 (269)
.++++||+||+|.+|..++..+...|.+|+++.++.++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~ 42 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR 42 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence 468999999999999999999999999999888776543
No 431
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.59 E-value=0.021 Score=48.27 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=49.9
Q ss_pred CCCCEEEEecCcchHHHH--HHHHHHHcCCEEEEEeCCHH--H-------------HH-HHHHHcCCc-ee--EecCChh
Q 024337 78 KHGECVFISAASGAVGQL--VGQFAKLLGCYVVGSAGSKD--K-------------VD-LLKNKFGFD-EA--FNYKEEA 136 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~--~i~~a~~~G~~V~~~~~s~~--~-------------~~-~~~~~~g~~-~~--~~~~~~~ 136 (269)
..++++||+|+++++|++ +++.+ ..|++|+++....+ + .+ .++ +.|.. .. .|..+.+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence 446899999999999999 67777 88999888874221 1 22 333 55643 22 2444431
Q ss_pred hHH---HHHHHHCCCCccEEEeCCCc
Q 024337 137 DLN---AALKRYFPEGIDVYFENVGG 159 (269)
Q Consensus 137 ~~~---~~i~~~~~~~~d~vid~~g~ 159 (269)
... +.+.+.. |++|+++++++.
T Consensus 117 ~v~~lie~I~e~~-G~IDiLVnSaA~ 141 (398)
T PRK13656 117 IKQKVIELIKQDL-GQVDLVVYSLAS 141 (398)
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCcc
Confidence 222 2333322 479999999985
No 432
>PRK04457 spermidine synthase; Provisional
Probab=96.59 E-value=0.044 Score=44.27 Aligned_cols=97 Identities=13% Similarity=0.134 Sum_probs=65.7
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCc---eeEecCChhhHHHHHHHHCCCCccEE
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFD---EAFNYKEEADLNAALKRYFPEGIDVY 153 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~~~~d~v 153 (269)
.+.++||+.|+ |.|..+..+++.. +.+|++++.+++-.+.+++.++.. .-+..... +..+.+.+. +++||+|
T Consensus 65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEE
Confidence 45678999996 4588888888876 569999999999999988666542 11111122 444444432 3479987
Q ss_pred E-eCCC----------chhHhhhHhhhhcCCEEEEE
Q 024337 154 F-ENVG----------GKTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 154 i-d~~g----------~~~~~~~~~~l~~~G~~v~~ 178 (269)
+ |... .+.++.+.+.|+++|.++.-
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 6 3321 14567888999999998863
No 433
>PRK14967 putative methyltransferase; Provisional
Probab=96.58 E-value=0.028 Score=44.21 Aligned_cols=95 Identities=21% Similarity=0.102 Sum_probs=63.2
Q ss_pred hcCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH---cCCce-eEecCChhhHHHHHHHHCCCC
Q 024337 75 CSAKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNK---FGFDE-AFNYKEEADLNAALKRYFPEG 149 (269)
Q Consensus 75 ~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~i~~~~~~~ 149 (269)
..+.++++||-.|+ | .|..+..+++. ++ +|++++.+++..+.++++ .+... +++. ++.+.+ ..++
T Consensus 32 ~~~~~~~~vLDlGc-G-~G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~----d~~~~~---~~~~ 101 (223)
T PRK14967 32 EGLGPGRRVLDLCT-G-SGALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG----DWARAV---EFRP 101 (223)
T ss_pred cccCCCCeEEEecC-C-HHHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC----chhhhc---cCCC
Confidence 45788899999997 4 48888888875 66 999999999888766532 23321 2221 332221 2247
Q ss_pred ccEEEeCCCc----------------------------hhHhhhHhhhhcCCEEEEEe
Q 024337 150 IDVYFENVGG----------------------------KTLDAVLPNMKIRGRIAACG 179 (269)
Q Consensus 150 ~d~vid~~g~----------------------------~~~~~~~~~l~~~G~~v~~g 179 (269)
||+|+...+. ..+..+.+.|+++|+++.+.
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999875321 12456788999999988763
No 434
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=96.57 E-value=0.0065 Score=51.02 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=33.1
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~ 115 (269)
++++|||+||+|.+|..+++.+...|.+|++++++++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 4678999999999999999999999999999987643
No 435
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.57 E-value=0.026 Score=49.08 Aligned_cols=44 Identities=23% Similarity=0.370 Sum_probs=36.7
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHcCC
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV-DLLKNKFGF 126 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~-~~~~~~~g~ 126 (269)
+|.|.||.|.+|.+.+..++..|.+|+++++++++. +.+. ++|.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~-~~gv 46 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK-ELGV 46 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH-HcCC
Confidence 689999779999999999999999999999988775 3444 6665
No 436
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.56 E-value=0.014 Score=46.43 Aligned_cols=105 Identities=16% Similarity=0.247 Sum_probs=66.6
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHH-HHHHHHC
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLN-AALKRYF 146 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~--~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~-~~i~~~~ 146 (269)
....+.||++|+=.| .|.|.++..+++..|- +|+.....+++.+.+++++ |....+..... |.. +...+-.
T Consensus 34 ~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~~~ 110 (247)
T PF08704_consen 34 MRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDEEL 110 (247)
T ss_dssp HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--STT-
T ss_pred HHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccccc
Confidence 457899999999877 4678999999998874 9999999999888776543 44322111111 221 1111111
Q ss_pred CCCccEE-EeCCCc-hhHhhhHhhh-hcCCEEEEEec
Q 024337 147 PEGIDVY-FENVGG-KTLDAVLPNM-KIRGRIAACGM 180 (269)
Q Consensus 147 ~~~~d~v-id~~g~-~~~~~~~~~l-~~~G~~v~~g~ 180 (269)
+..+|.| +|--.. ..+..+.+.| +++|+++.+..
T Consensus 111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP 147 (247)
T PF08704_consen 111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP 147 (247)
T ss_dssp TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence 2368866 454444 7889999999 89999998854
No 437
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=96.56 E-value=0.02 Score=45.72 Aligned_cols=81 Identities=20% Similarity=0.250 Sum_probs=52.4
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHcC----Cce---eEecCC-hhhHHHHHHHHC--
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--VDLLKNKFG----FDE---AFNYKE-EADLNAALKRYF-- 146 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~--~~~~~~~~g----~~~---~~~~~~-~~~~~~~i~~~~-- 146 (269)
.++.++|+|+++|+|.+++..+...|++|+++.+..+. .+.+.+... ... ..|..+ ..+....+.+..
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 57889999999999999999999999998888877553 333331222 111 245553 312222232222
Q ss_pred CCCccEEEeCCCc
Q 024337 147 PEGIDVYFENVGG 159 (269)
Q Consensus 147 ~~~~d~vid~~g~ 159 (269)
-+++|++++++|.
T Consensus 84 ~g~id~lvnnAg~ 96 (251)
T COG1028 84 FGRIDILVNNAGI 96 (251)
T ss_pred cCCCCEEEECCCC
Confidence 2369999999984
No 438
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=96.56 E-value=0.042 Score=44.20 Aligned_cols=96 Identities=11% Similarity=0.125 Sum_probs=66.6
Q ss_pred hhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccE
Q 024337 74 VCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDV 152 (269)
Q Consensus 74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~ 152 (269)
...+.++++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++.+.....+.. +..+ . ...+.||+
T Consensus 26 ~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~~-~--~~~~~fD~ 96 (258)
T PRK01683 26 RVPLENPRYVVDLGC--GPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIAS-W--QPPQALDL 96 (258)
T ss_pred hCCCcCCCEEEEEcc--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chhc-c--CCCCCccE
Confidence 345678899999996 5678888888776 56999999999988888744432222222 2111 1 11237999
Q ss_pred EEeCCCc-------hhHhhhHhhhhcCCEEEEE
Q 024337 153 YFENVGG-------KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 153 vid~~g~-------~~~~~~~~~l~~~G~~v~~ 178 (269)
|+....- ..+..+.+.|+++|.++..
T Consensus 97 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 97 IFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred EEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 9865542 3577888999999998875
No 439
>PRK08309 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.22 Score=37.56 Aligned_cols=89 Identities=15% Similarity=0.125 Sum_probs=55.1
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc---e--eEecCChhhHHHHHHHHC--CCCccEEE
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD---E--AFNYKEEADLNAALKRYF--PEGIDVYF 154 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~---~--~~~~~~~~~~~~~i~~~~--~~~~d~vi 154 (269)
+++|+||+ ++|..+++.+...|++|++.++++++.+.+...++.. . ..|..+..+....+.... .+++|.+|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 58999997 5666677777778999999999988776655334321 1 236666424444444432 23789999
Q ss_pred eCCCchhHhhhHhhhhc
Q 024337 155 ENVGGKTLDAVLPNMKI 171 (269)
Q Consensus 155 d~~g~~~~~~~~~~l~~ 171 (269)
+.+=...-+......+.
T Consensus 81 ~~vh~~~~~~~~~~~~~ 97 (177)
T PRK08309 81 AWIHSSAKDALSVVCRE 97 (177)
T ss_pred EeccccchhhHHHHHHH
Confidence 88765433333444443
No 440
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.54 E-value=0.022 Score=44.11 Aligned_cols=92 Identities=17% Similarity=0.124 Sum_probs=59.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV 157 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~-~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 157 (269)
.+.+|+|.|| |.+|..-++.+...|++|+++++... ....+. +.|--..+. .+. . ...+ .++++||-++
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~-~~~-~-~~dl-----~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLA-RCF-D-ADIL-----EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEe-CCC-C-HHHh-----CCcEEEEECC
Confidence 4679999999 99999999999999999999886533 333333 233111221 111 1 1112 2589999999
Q ss_pred Cch-hHhhhHhhhhcCCEEEEEec
Q 024337 158 GGK-TLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 158 g~~-~~~~~~~~l~~~G~~v~~g~ 180 (269)
+.. .-.......+..|..+.+..
T Consensus 78 ~d~~ln~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 78 DDEELNRRVAHAARARGVPVNVVD 101 (205)
T ss_pred CCHHHHHHHHHHHHHcCCEEEECC
Confidence 874 44455555666777776543
No 441
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.023 Score=45.32 Aligned_cols=41 Identities=17% Similarity=0.260 Sum_probs=34.4
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLK 121 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~ 121 (269)
++++|+||+|++|...++.+...|++|+++++++ ++.+.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~ 43 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA 43 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence 4799999999999999999988999999999876 4444443
No 442
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.51 E-value=0.02 Score=45.90 Aligned_cols=80 Identities=11% Similarity=0.100 Sum_probs=50.2
Q ss_pred CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeCC-----------HHHHHH----HHHHcCCce---eEecCChhhH
Q 024337 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGS-----------KDKVDL----LKNKFGFDE---AFNYKEEADL 138 (269)
Q Consensus 79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~s-----------~~~~~~----~~~~~g~~~---~~~~~~~~~~ 138 (269)
++++++|+||+ +++|..+++.+...|++|++++++ .++... ++ +.|... ..|..+.++.
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHH
Confidence 57899999997 499999999999999999987532 121111 22 334321 2344443233
Q ss_pred HHHHHHHCC--CCccEEEeCCCc
Q 024337 139 NAALKRYFP--EGIDVYFENVGG 159 (269)
Q Consensus 139 ~~~i~~~~~--~~~d~vid~~g~ 159 (269)
.+.+.+... +.+|++|.++|.
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~ 106 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAY 106 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCC
Confidence 333333321 368999999873
No 443
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.51 E-value=0.019 Score=42.36 Aligned_cols=82 Identities=20% Similarity=0.242 Sum_probs=58.6
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHcCCceeEecCC---hhhHHHHHHHHCC--CCc
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV-DLLKNKFGFDEAFNYKE---EADLNAALKRYFP--EGI 150 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~-~~~~~~~g~~~~~~~~~---~~~~~~~i~~~~~--~~~ 150 (269)
-.++-.-+|.|+.+++|.+++..+..+|+.|+..+....+- +.++ ++|-..+|...+ +.+....+..... |..
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence 34566789999999999999999999999999998665554 4555 999876664333 2133333333222 378
Q ss_pred cEEEeCCCc
Q 024337 151 DVYFENVGG 159 (269)
Q Consensus 151 d~vid~~g~ 159 (269)
|..++|+|-
T Consensus 85 d~~vncagi 93 (260)
T KOG1199|consen 85 DALVNCAGI 93 (260)
T ss_pred eeeeeccce
Confidence 999999985
No 444
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.51 E-value=0.025 Score=47.25 Aligned_cols=93 Identities=12% Similarity=0.092 Sum_probs=63.8
Q ss_pred CCCCEEEEecCcchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHc----CCceeEecCChhhHHHHHHHHCCCCcc
Q 024337 78 KHGECVFISAASGAVGQLVGQFA-KLLGC-YVVGSAGSKDKVDLLKNKF----GFDEAFNYKEEADLNAALKRYFPEGID 151 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a-~~~G~-~V~~~~~s~~~~~~~~~~~----g~~~~~~~~~~~~~~~~i~~~~~~~~d 151 (269)
...++++|+|+ |+.|...+..+ ...++ +|.+..+++++.+.+.+++ +.. +..+. +..+.+. ..|
T Consensus 125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD 194 (325)
T PRK08618 125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD 194 (325)
T ss_pred CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence 34678999998 99998777654 45677 8888999988876554343 332 22222 3333343 489
Q ss_pred EEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337 152 VYFENVGGKTLDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 152 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 181 (269)
+|+.|++....... +.++++-++..+|..
T Consensus 195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSF 223 (325)
T ss_pred EEEEccCCCCcchH-HhcCCCcEEEecCCC
Confidence 99999997443344 888998898888874
No 445
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.51 E-value=0.086 Score=41.53 Aligned_cols=90 Identities=19% Similarity=0.241 Sum_probs=58.5
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCE---EEEEeCC----HHH--------HHHHHHHcCCceeEecCChhhHHHHH
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCY---VVGSAGS----KDK--------VDLLKNKFGFDEAFNYKEEADLNAAL 142 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~---V~~~~~s----~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~i 142 (269)
-++.+++|+|+ |+.|..++..+...|++ +++++++ .++ .++++ .++... .+ . ++.+.+
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~---~-~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG---G-TLKEAL 95 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc---C-CHHHHH
Confidence 45789999999 99999999999889984 8899987 343 22333 333211 11 1 333333
Q ss_pred HHHCCCCccEEEeCCCchhH-hhhHhhhhcCCEEEEEe
Q 024337 143 KRYFPEGIDVYFENVGGKTL-DAVLPNMKIRGRIAACG 179 (269)
Q Consensus 143 ~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g 179 (269)
+ ++|++|++++...+ ...++.|.++..+..+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 2 38999999974333 35667777766555443
No 446
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.50 E-value=0.029 Score=47.41 Aligned_cols=77 Identities=19% Similarity=0.243 Sum_probs=51.1
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc--CCc-eeE--ecCChhhHHHHHHHHCCCCccE
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF--GFD-EAF--NYKEEADLNAALKRYFPEGIDV 152 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~--g~~-~~~--~~~~~~~~~~~i~~~~~~~~d~ 152 (269)
..+.+|||+||+|.+|..+++.+...|.+|+++.++.++.+.+...+ +.. ..+ |..+. + .+.+... ++|+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~---~~~~~~~-~~d~ 82 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEE-G---SFDEAVK-GCDG 82 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCH-H---HHHHHHc-CCCE
Confidence 45779999999999999999999999999999988776554433232 111 122 22222 1 2222222 4899
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
||.+++.
T Consensus 83 Vih~A~~ 89 (353)
T PLN02896 83 VFHVAAS 89 (353)
T ss_pred EEECCcc
Confidence 9998873
No 447
>PRK01581 speE spermidine synthase; Validated
Probab=96.50 E-value=0.072 Score=44.74 Aligned_cols=99 Identities=13% Similarity=0.066 Sum_probs=63.6
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHc-C--------C-ceeEecCChhhHHHHHHHH
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKF-G--------F-DEAFNYKEEADLNAALKRY 145 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~-g--------~-~~~~~~~~~~~~~~~i~~~ 145 (269)
....++|||.|+ |.|..+..++++-+ .+|++++.+++-.+.++ ++ . . +.-+..... +..+.+..
T Consensus 148 h~~PkrVLIIGg--GdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~- 222 (374)
T PRK01581 148 VIDPKRVLILGG--GDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS- 222 (374)
T ss_pred CCCCCEEEEECC--CHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-
Confidence 345679999995 56777788888655 49999999999899888 42 1 1 111111111 33444443
Q ss_pred CCCCccEEEeCCCc------------hhHhhhHhhhhcCCEEEEEec
Q 024337 146 FPEGIDVYFENVGG------------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 146 ~~~~~d~vid~~g~------------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
.++.||+||--... +.+..+.+.|+++|.++.-..
T Consensus 223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 33479977644321 246788999999999887543
No 448
>PLN00203 glutamyl-tRNA reductase
Probab=96.50 E-value=0.034 Score=49.30 Aligned_cols=73 Identities=26% Similarity=0.368 Sum_probs=52.5
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
+.+|+|+|+ |.+|.++++.+...|+ +|+++.++.++.+.+.+.++... +......+..+.+. .+|+||.|++
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~-i~~~~~~dl~~al~-----~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVE-IIYKPLDEMLACAA-----EADVVFTSTS 338 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCc-eEeecHhhHHHHHh-----cCCEEEEccC
Confidence 689999998 9999999999999998 89999999998877764664211 11111102222222 5899999998
Q ss_pred c
Q 024337 159 G 159 (269)
Q Consensus 159 ~ 159 (269)
.
T Consensus 339 s 339 (519)
T PLN00203 339 S 339 (519)
T ss_pred C
Confidence 6
No 449
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.47 E-value=0.06 Score=40.06 Aligned_cols=87 Identities=17% Similarity=0.163 Sum_probs=58.8
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc-
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG- 159 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~- 159 (269)
.+|.+.|. |.+|...++-+...|.+|++.++++++.+.+. +.|+. ..+ +..+.+++ .|+|+-|+..
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~-~~~-----s~~e~~~~-----~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAE-VAD-----SPAEAAEQ-----ADVVILCVPDD 68 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEE-EES-----SHHHHHHH-----BSEEEE-SSSH
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhh-hhh-----hhhhHhhc-----ccceEeecccc
Confidence 46888998 99999999999999999999999999998888 66643 221 33344443 6899998886
Q ss_pred hhHhh------hHhhhhcCCEEEEEec
Q 024337 160 KTLDA------VLPNMKIRGRIAACGM 180 (269)
Q Consensus 160 ~~~~~------~~~~l~~~G~~v~~g~ 180 (269)
..... .+..++++..++.++.
T Consensus 69 ~~v~~v~~~~~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPGKIIIDMST 95 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred hhhhhhhhhhHHhhccccceEEEecCC
Confidence 33333 3444556667776655
No 450
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.47 E-value=0.019 Score=47.74 Aligned_cols=40 Identities=20% Similarity=0.259 Sum_probs=34.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVD 118 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~ 118 (269)
.+++|+|+||+|.+|..+++.+...|.+|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence 4789999999999999999999889999998888765433
No 451
>PLN02686 cinnamoyl-CoA reductase
Probab=96.46 E-value=0.025 Score=48.15 Aligned_cols=45 Identities=11% Similarity=0.108 Sum_probs=37.7
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~ 121 (269)
...+++|||+||+|.+|..+++.+...|++|+++.++.++.+.++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 355789999999999999999999999999998887766555443
No 452
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.46 E-value=0.005 Score=42.01 Aligned_cols=87 Identities=15% Similarity=0.249 Sum_probs=56.7
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.+.+|||.|+ |.+|..-++.+...|++|+++++.. +..+ +.-.. ... .+.+. . .++++|+-+++
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~---~~~-~~~~~----l-~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQL---IRR-EFEED----L-DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEE---EES-S-GGG----C-TTESEEEE-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHH---Hhh-hHHHH----H-hhheEEEecCC
Confidence 5789999998 9999999999999999999999775 2222 11111 111 33111 1 26999999998
Q ss_pred chh-HhhhHhhhhcCCEEEEEecc
Q 024337 159 GKT-LDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 159 ~~~-~~~~~~~l~~~G~~v~~g~~ 181 (269)
... -....+..+..|.++.....
T Consensus 70 d~~~n~~i~~~a~~~~i~vn~~D~ 93 (103)
T PF13241_consen 70 DPELNEAIYADARARGILVNVVDD 93 (103)
T ss_dssp -HHHHHHHHHHHHHTTSEEEETT-
T ss_pred CHHHHHHHHHHHhhCCEEEEECCC
Confidence 744 44555566668988887653
No 453
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=96.45 E-value=0.021 Score=44.96 Aligned_cols=74 Identities=18% Similarity=0.218 Sum_probs=52.4
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFPEGIDVYFENVGG 159 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 159 (269)
|||+||+|-+|..++..+...|.+|+.+.++.........+.... ...|..+...+.+.+... ++|.||.+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence 799999999999999999999999998888777665544233332 234555441333333332 68999999885
No 454
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=96.45 E-value=0.024 Score=45.62 Aligned_cols=95 Identities=20% Similarity=0.143 Sum_probs=66.7
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCcc
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGID 151 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d 151 (269)
......++++||-.|+ |.|..+..+++.. +.+|++++.++...+.++ +.+.. .+.. +.. .+. ..+.||
T Consensus 23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~-~~~~----d~~-~~~--~~~~fD 91 (255)
T PRK14103 23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVD-ARTG----DVR-DWK--PKPDTD 91 (255)
T ss_pred HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCc-EEEc----Chh-hCC--CCCCce
Confidence 3345678899999996 5577888888775 679999999999888887 54443 2221 221 111 123799
Q ss_pred EEEeCCCc-------hhHhhhHhhhhcCCEEEEE
Q 024337 152 VYFENVGG-------KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 152 ~vid~~g~-------~~~~~~~~~l~~~G~~v~~ 178 (269)
+|+....- ..+..+.+.|+++|+++..
T Consensus 92 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 92 VVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred EEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 99876542 3567888999999999865
No 455
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.44 E-value=0.023 Score=42.10 Aligned_cols=76 Identities=21% Similarity=0.191 Sum_probs=53.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce----eEecCChhhHHHHHHHHC-CC-CccE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE----AFNYKEEADLNAALKRYF-PE-GIDV 152 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~----~~~~~~~~~~~~~i~~~~-~~-~~d~ 152 (269)
.|..|++.|+.-|+|...++-+...|++|+++.|.++++..+- +.-... +.|.. ++ +.+.+.. +- .+|-
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV-~e~p~~I~Pi~~Dls---~w-ea~~~~l~~v~pidg 80 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV-KETPSLIIPIVGDLS---AW-EALFKLLVPVFPIDG 80 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH-hhCCcceeeeEeccc---HH-HHHHHhhcccCchhh
Confidence 4788999999999999999999999999999999999988776 333332 22322 22 2233322 22 5677
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
.++.+|-
T Consensus 81 LVNNAgv 87 (245)
T KOG1207|consen 81 LVNNAGV 87 (245)
T ss_pred hhccchh
Confidence 7777664
No 456
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.44 E-value=0.023 Score=41.95 Aligned_cols=88 Identities=10% Similarity=0.137 Sum_probs=55.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.+.+|+|.|| |.+|..-++.+...|++|+++. ++..+.++ +++.-. ...+ .+.+. .-.++|+|+-+++
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~---~~~~~----dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQK---TFSND----DIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEec---ccChh----cCCCceEEEECCC
Confidence 5789999999 9999999998888999999885 33344444 443211 1111 12111 0126899999999
Q ss_pred chhHhhhHhhhhcCCEEEEE
Q 024337 159 GKTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 159 ~~~~~~~~~~l~~~G~~v~~ 178 (269)
....+..+....+.+.++..
T Consensus 80 d~e~N~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 80 QHAVNMMVKQAAHDFQWVNV 99 (157)
T ss_pred CHHHHHHHHHHHHHCCcEEE
Confidence 86666555555444444443
No 457
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.43 E-value=0.019 Score=44.72 Aligned_cols=99 Identities=18% Similarity=0.143 Sum_probs=63.0
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCceeEecCChhhHHHHHHHHCCCC
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF---GFDEAFNYKEEADLNAALKRYFPEG 149 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~---g~~~~~~~~~~~~~~~~i~~~~~~~ 149 (269)
...+++++++||-.|+ |.|..+..+++.. .+|+.++.+++..+.+++.+ +... ++.... +..+... ..+.
T Consensus 72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~~~~--~~~~ 144 (212)
T PRK00312 72 ELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHN-VSVRHG-DGWKGWP--AYAP 144 (212)
T ss_pred HhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCc-eEEEEC-CcccCCC--cCCC
Confidence 3467889999999986 5566666666653 58999999988777766433 3322 111111 1111111 1137
Q ss_pred ccEEEeCCCc-hhHhhhHhhhhcCCEEEEE
Q 024337 150 IDVYFENVGG-KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 150 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 178 (269)
||.|+..... .......+.|+++|+++..
T Consensus 145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 145 FDRILVTAAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred cCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence 9988766553 4556778899999998765
No 458
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=96.42 E-value=0.12 Score=39.35 Aligned_cols=98 Identities=17% Similarity=0.231 Sum_probs=64.1
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---cCCceeEecCChhhHHHHHHHHCCC
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKNK---FGFDEAFNYKEEADLNAALKRYFPE 148 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~~---~g~~~~~~~~~~~~~~~~i~~~~~~ 148 (269)
....+.++++||=.|+ |.|..++.+++.. +.+|++++.+++..+.++++ ++... +..... +... ...+
T Consensus 25 ~~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~-i~~~~~-d~~~----~~~~ 96 (187)
T PRK08287 25 SKLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGN-IDIIPG-EAPI----ELPG 96 (187)
T ss_pred HhcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCC-eEEEec-Cchh----hcCc
Confidence 3445678899999886 5578888888765 46999999999887777632 33322 111111 2111 1124
Q ss_pred CccEEEeCCC-c---hhHhhhHhhhhcCCEEEEE
Q 024337 149 GIDVYFENVG-G---KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 149 ~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~~ 178 (269)
.||+++.... . ..+..+.+.|+++|+++..
T Consensus 97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 7999986432 1 4567788999999998764
No 459
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.37 E-value=0.35 Score=38.72 Aligned_cols=94 Identities=16% Similarity=0.136 Sum_probs=61.7
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV 157 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 157 (269)
.+..+||-.|+ | .|..+..+++ .|.+|++++.+++..+.+++.......+..+-. + + ...++.||+|+...
T Consensus 41 ~~~~~vLDiGc-G-~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~-~----~-~~~~~~fD~V~s~~ 111 (251)
T PRK10258 41 RKFTHVLDAGC-G-PGWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIE-S----L-PLATATFDLAWSNL 111 (251)
T ss_pred cCCCeEEEeeC-C-CCHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcc-c----C-cCCCCcEEEEEECc
Confidence 45788999997 3 3666655554 588999999999999888833322222221111 1 0 11123799998755
Q ss_pred Cc-------hhHhhhHhhhhcCCEEEEEec
Q 024337 158 GG-------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 158 g~-------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
.- ..+.++.+.|+++|.++....
T Consensus 112 ~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 112 AVQWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred hhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 31 457888999999999987644
No 460
>PRK08317 hypothetical protein; Provisional
Probab=96.37 E-value=0.033 Score=44.02 Aligned_cols=103 Identities=18% Similarity=0.285 Sum_probs=67.6
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc-CCceeEecCChhhHHHHHHHHCCCC
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF-GFDEAFNYKEEADLNAALKRYFPEG 149 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~~~ 149 (269)
....+.++++||..|+ |.|..+..+++..+ .++++++.+++..+.+++.. .....+..... +... . ...++.
T Consensus 13 ~~~~~~~~~~vLdiG~--G~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~ 87 (241)
T PRK08317 13 ELLAVQPGDRVLDVGC--GPGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADG-L-PFPDGS 87 (241)
T ss_pred HHcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-cccc-C-CCCCCC
Confidence 4567889999999997 44888889998873 59999999999888887331 11111111111 1110 0 112247
Q ss_pred ccEEEeCCC-----c--hhHhhhHhhhhcCCEEEEEec
Q 024337 150 IDVYFENVG-----G--KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 150 ~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 180 (269)
||+|+.... . ..+....++|+++|.++....
T Consensus 88 ~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 88 FDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred ceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 998876432 1 467889999999999987653
No 461
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.35 E-value=0.077 Score=43.76 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=30.5
Q ss_pred CCCEEEEecCc--chHHHHHHHHHHHcCCEEEEEeC
Q 024337 79 HGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAG 112 (269)
Q Consensus 79 ~~~~vlI~ga~--g~vG~~~i~~a~~~G~~V~~~~~ 112 (269)
.+++++|+|++ +|+|.+.++.+...|++|++.++
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~ 42 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW 42 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence 57899999995 89999999999999999998653
No 462
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=96.35 E-value=0.015 Score=48.85 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=31.6
Q ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337 81 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115 (269)
Q Consensus 81 ~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~ 115 (269)
++|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 47999999999999999999999999999987653
No 463
>PRK07574 formate dehydrogenase; Provisional
Probab=96.35 E-value=0.029 Score=47.78 Aligned_cols=89 Identities=17% Similarity=0.119 Sum_probs=61.6
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.+++|.|+|. |.+|..+++.++.+|++|++.+++....+..+ .++... +. ++.+.++ ..|+|+-+++
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~---~~---~l~ell~-----~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY---HV---SFDSLVS-----VCDVVTIHCP 257 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee---cC---CHHHHhh-----cCCEEEEcCC
Confidence 4678999998 99999999999999999999998753333333 445321 11 3333333 3788888887
Q ss_pred c--h---hH-hhhHhhhhcCCEEEEEec
Q 024337 159 G--K---TL-DAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 159 ~--~---~~-~~~~~~l~~~G~~v~~g~ 180 (269)
. + .+ ...+..|+++..+|.++.
T Consensus 258 lt~~T~~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence 3 1 12 356777888888877765
No 464
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.35 E-value=0.024 Score=44.73 Aligned_cols=76 Identities=20% Similarity=0.292 Sum_probs=48.5
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHH----HHHHcCCc---eeEecCChhhHHHHHHHHC--CCCccE
Q 024337 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDL----LKNKFGFD---EAFNYKEEADLNAALKRYF--PEGIDV 152 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~----~~~~~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~ 152 (269)
++|+|++|++|..+++.+...|++|++++++. ++.+. ++ ..+.. ...|..+..++.+.+.+.. -+++|.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELK-AYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH-hcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 58999999999999999998999999998764 33222 22 33421 2345544312222222221 136899
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
++.+.|.
T Consensus 80 vi~~ag~ 86 (239)
T TIGR01830 80 LVNNAGI 86 (239)
T ss_pred EEECCCC
Confidence 9999884
No 465
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=96.34 E-value=0.068 Score=47.72 Aligned_cols=93 Identities=18% Similarity=0.175 Sum_probs=61.0
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.+++++|.|+ ||+|.+++..+...|++|+++.++.++.+.+.+.++.. .+... +.. +......|++++|++
T Consensus 378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~---~~~----~~~~~~~diiINtT~ 448 (529)
T PLN02520 378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLA---DLE----NFHPEEGMILANTTS 448 (529)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHh---Hhh----hhccccCeEEEeccc
Confidence 3678999999 89999999999999999999999988877766466432 22221 111 111124789999887
Q ss_pred chh------HhhhHhhhhcCCEEEEEec
Q 024337 159 GKT------LDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 159 ~~~------~~~~~~~l~~~G~~v~~g~ 180 (269)
-.. .......+++.+.++.+..
T Consensus 449 vGm~~~~~~~pl~~~~l~~~~~v~D~vY 476 (529)
T PLN02520 449 VGMQPNVDETPISKHALKHYSLVFDAVY 476 (529)
T ss_pred CCCCCCCCCCcccHhhCCCCCEEEEecc
Confidence 321 1122344666666665544
No 466
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.33 E-value=0.018 Score=46.97 Aligned_cols=95 Identities=8% Similarity=0.119 Sum_probs=60.5
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCc-eeEecCChhhHHHHHHHHCC-CC-ccEEEeCCC
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD-EAFNYKEEADLNAALKRYFP-EG-IDVYFENVG 158 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~-~~-~d~vid~~g 158 (269)
+|+|+||||.+|..+++.+...|.+|.+.+|++++.. ..+.. ...|..+...+...++.... .+ +|.++-+.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~ 76 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP 76 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence 4899999999999999999989999999999876432 22332 23456554233333332111 25 899988776
Q ss_pred c-----hhHhhhHhhhhcCC--EEEEEec
Q 024337 159 G-----KTLDAVLPNMKIRG--RIAACGM 180 (269)
Q Consensus 159 ~-----~~~~~~~~~l~~~G--~~v~~g~ 180 (269)
. ......++.++..| ++|.++.
T Consensus 77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 3 12334444444444 7877764
No 467
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.32 E-value=0.052 Score=44.04 Aligned_cols=94 Identities=17% Similarity=0.159 Sum_probs=65.7
Q ss_pred cCCcchhHHHHHHHhhcC-CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhH
Q 024337 60 LGMPGMTAYVGFYEVCSA-KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL 138 (269)
Q Consensus 60 l~~~~~~a~~~l~~~~~~-~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~ 138 (269)
+||+.......| +..++ -.|++++|.|.+.-+|.-.+.++...|++|+..-.. .. ++
T Consensus 138 ~PcTp~aii~lL-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~--------------------t~-~l 195 (285)
T PRK14189 138 RPCTPYGVMKML-ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK--------------------TR-DL 195 (285)
T ss_pred cCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC--------------------CC-CH
Confidence 455544444444 33443 368999999998888999999999999999875311 11 33
Q ss_pred HHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337 139 NAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 139 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 181 (269)
.+.+++ .|+++-++|...+-. -+.++++..++.+|..
T Consensus 196 ~~~~~~-----ADIVV~avG~~~~i~-~~~ik~gavVIDVGin 232 (285)
T PRK14189 196 AAHTRQ-----ADIVVAAVGKRNVLT-ADMVKPGATVIDVGMN 232 (285)
T ss_pred HHHhhh-----CCEEEEcCCCcCccC-HHHcCCCCEEEEcccc
Confidence 333433 799999999744322 2889999999999874
No 468
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=96.32 E-value=0.014 Score=46.17 Aligned_cols=101 Identities=21% Similarity=0.313 Sum_probs=63.4
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCce--eEecCChhhHHHHHHHH
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEADLNAALKRY 145 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~i~~~ 145 (269)
+....+++++||-.++ |+|..+..+++..+ .+|++++-|++.++.+++++ +... .+..+.. ++. .
T Consensus 41 ~~~~~~~g~~vLDv~~--GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~-~lp-----~ 112 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVAC--GTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAE-DLP-----F 112 (233)
T ss_dssp HHHT--S--EEEEET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTT-B-------S
T ss_pred hccCCCCCCEEEEeCC--ChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHH-Hhc-----C
Confidence 3356788999999885 77889999998875 59999999999888887443 2221 1211111 111 1
Q ss_pred CCCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEecc
Q 024337 146 FPEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 146 ~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~ 181 (269)
.++.||+|..+.|- ..+.+..+.|+|||+++.+...
T Consensus 113 ~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~ 155 (233)
T PF01209_consen 113 PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFS 155 (233)
T ss_dssp -TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeecc
Confidence 12369999987773 3578899999999999988764
No 469
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=96.32 E-value=0.02 Score=44.84 Aligned_cols=98 Identities=13% Similarity=0.069 Sum_probs=62.3
Q ss_pred cCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee--------------EecCChhhHHHH
Q 024337 76 SAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA--------------FNYKEEADLNAA 141 (269)
Q Consensus 76 ~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~--------------~~~~~~~~~~~~ 141 (269)
.+.++.+||+.|+ |.|.-++-+|. +|++|++++.++...+.+.++.+.... ++.... ++.+.
T Consensus 34 ~~~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG-DFFAL 109 (218)
T ss_pred CCCCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC-cccCC
Confidence 3456789999996 77888888876 699999999999988876434443211 000000 11110
Q ss_pred HHHHCCCCccEEEeCCCc---------hhHhhhHhhhhcCCEEEEE
Q 024337 142 LKRYFPEGIDVYFENVGG---------KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 142 i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~ 178 (269)
-.. ..+.||.++|..-- ..+....++|+++|+++.+
T Consensus 110 ~~~-~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 110 TAA-DLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred Ccc-cCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 000 11368999986631 3467888899999875544
No 470
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.31 E-value=0.069 Score=43.72 Aligned_cols=78 Identities=12% Similarity=0.121 Sum_probs=47.7
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHcCCc--eeEecCChhhHHHHHHHHCCCCccE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK---DKVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGIDV 152 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~---~~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d~ 152 (269)
++++++|+|+ ||.+.+++..+...|+ +++++.|++ ++.+.+.+.++.. ..+..... +....+.+.. ..+|+
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~~-~~aDi 199 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEAL-ASADI 199 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhhc-ccCCE
Confidence 5679999998 8889888777777898 899999984 3555444355421 11111111 1011122111 25899
Q ss_pred EEeCCCc
Q 024337 153 YFENVGG 159 (269)
Q Consensus 153 vid~~g~ 159 (269)
|++|+.-
T Consensus 200 vINaTp~ 206 (288)
T PRK12749 200 LTNGTKV 206 (288)
T ss_pred EEECCCC
Confidence 9999973
No 471
>PRK14968 putative methyltransferase; Provisional
Probab=96.27 E-value=0.023 Score=43.22 Aligned_cols=44 Identities=27% Similarity=0.197 Sum_probs=35.3
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~ 123 (269)
..+++++|..|+ |.|..+..+++. +.++++++.+++..+.++++
T Consensus 21 ~~~~~~vLd~G~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~ 64 (188)
T PRK14968 21 DKKGDRVLEVGT--GSGIVAIVAAKN-GKKVVGVDINPYAVECAKCN 64 (188)
T ss_pred ccCCCEEEEEcc--ccCHHHHHHHhh-cceEEEEECCHHHHHHHHHH
Confidence 467889999986 667788888877 89999999999887777543
No 472
>PLN03139 formate dehydrogenase; Provisional
Probab=96.27 E-value=0.032 Score=47.51 Aligned_cols=89 Identities=28% Similarity=0.248 Sum_probs=61.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.|++|.|+|. |.+|...++.++.+|++|++.+++....+... ..|+... . ++.+.+. ..|+|+-+++
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~-----~sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE----E--DLDAMLP-----KCDVVVINTP 264 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec----C--CHHHHHh-----hCCEEEEeCC
Confidence 5789999997 99999999999999999999887654333333 4554211 1 3333333 2788888887
Q ss_pred c--h---hH-hhhHhhhhcCCEEEEEec
Q 024337 159 G--K---TL-DAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 159 ~--~---~~-~~~~~~l~~~G~~v~~g~ 180 (269)
. + .+ ...+..|+++..+|.++.
T Consensus 265 lt~~T~~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 265 LTEKTRGMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred CCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence 3 1 12 356777888888877754
No 473
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=96.26 E-value=0.024 Score=39.41 Aligned_cols=96 Identities=16% Similarity=0.137 Sum_probs=60.3
Q ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CceeEecCChhhHHHHHHHHCCCCccEEEeC
Q 024337 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEADLNAALKRYFPEGIDVYFEN 156 (269)
Q Consensus 80 ~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~ 156 (269)
|.+|+-.|+ |.|...+.+++....++++++.++...+.++..+. ...-++.... ++.+.......+++|+|+-.
T Consensus 1 g~~vlD~~~--G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~D~Iv~n 77 (117)
T PF13659_consen 1 GDRVLDPGC--GSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG-DARDLPEPLPDGKFDLIVTN 77 (117)
T ss_dssp TEEEEEETS--TTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES-HHHHHHHTCTTT-EEEEEE-
T ss_pred CCEEEEcCc--chHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC-chhhchhhccCceeEEEEEC
Confidence 457777775 55666667776655799999999998888774332 2111222222 44444433334589999875
Q ss_pred CCc---------------hhHhhhHhhhhcCCEEEEE
Q 024337 157 VGG---------------KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 157 ~g~---------------~~~~~~~~~l~~~G~~v~~ 178 (269)
-.. ..+..+.+.|+++|.++.+
T Consensus 78 pP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~ 114 (117)
T PF13659_consen 78 PPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI 114 (117)
T ss_dssp -STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 542 1267888999999988865
No 474
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=96.26 E-value=0.0052 Score=40.77 Aligned_cols=82 Identities=22% Similarity=0.270 Sum_probs=54.2
Q ss_pred chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEecCChhhHHHHHHHHCCCCccEEEeCCCc-------h
Q 024337 90 GAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNYKEEADLNAALKRYFPEGIDVYFENVGG-------K 160 (269)
Q Consensus 90 g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-------~ 160 (269)
.|.|..+..+++.-+.+|++++.+++..+.+++...... ....+.. ++ ...++.||+|+....- .
T Consensus 5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~ 78 (95)
T PF08241_consen 5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA 78 (95)
T ss_dssp -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence 357889999998867799999999999999885444321 2222211 11 1112379999875542 3
Q ss_pred hHhhhHhhhhcCCEEEE
Q 024337 161 TLDAVLPNMKIRGRIAA 177 (269)
Q Consensus 161 ~~~~~~~~l~~~G~~v~ 177 (269)
.+.++.+.|+++|+++.
T Consensus 79 ~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 79 ALREIYRVLKPGGRLVI 95 (95)
T ss_dssp HHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHcCcCeEEeC
Confidence 56889999999999873
No 475
>PRK06849 hypothetical protein; Provisional
Probab=96.26 E-value=0.059 Score=46.23 Aligned_cols=95 Identities=13% Similarity=0.093 Sum_probs=61.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce--eEec--CChhhHHHHHHHHCCC-CccEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE--AFNY--KEEADLNAALKRYFPE-GIDVY 153 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~--~~~~--~~~~~~~~~i~~~~~~-~~d~v 153 (269)
...+|||+|+..+.|+..++.++..|.+|++++..+....... ..++. .+.. .+...+.+.+.+.... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s--~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFS--RAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH--HhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4689999999888999999999999999999997755433221 12222 2211 1111566666665544 79999
Q ss_pred EeCCCch-hHhhhHhhhhcCCEE
Q 024337 154 FENVGGK-TLDAVLPNMKIRGRI 175 (269)
Q Consensus 154 id~~g~~-~~~~~~~~l~~~G~~ 175 (269)
+-+.... .+....+.+.++.++
T Consensus 81 IP~~e~~~~~a~~~~~l~~~~~v 103 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAYCEV 103 (389)
T ss_pred EECChHHHhHHhhhhhhcCCcEE
Confidence 9887752 333344556555444
No 476
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.25 E-value=0.024 Score=44.82 Aligned_cols=76 Identities=14% Similarity=0.132 Sum_probs=47.5
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHH---cCCc---eeEecCChhhHHHHHHHHC--CCCccEE
Q 024337 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKVDLLKNK---FGFD---EAFNYKEEADLNAALKRYF--PEGIDVY 153 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~-~~~~~~~~~---~g~~---~~~~~~~~~~~~~~i~~~~--~~~~d~v 153 (269)
++|+|++|++|..+++.+...|++|++++++. ++.+.+.++ .+.. ...|..+..+....+.+.. .++.|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999999999999999888653 333332212 2321 1334444312222233221 2368999
Q ss_pred EeCCC
Q 024337 154 FENVG 158 (269)
Q Consensus 154 id~~g 158 (269)
+.+.|
T Consensus 81 i~~ag 85 (239)
T TIGR01831 81 VLNAG 85 (239)
T ss_pred EECCC
Confidence 98887
No 477
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.25 E-value=0.094 Score=42.55 Aligned_cols=94 Identities=19% Similarity=0.135 Sum_probs=65.4
Q ss_pred cCCcchhHHHHHHHhhcCC-CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhH
Q 024337 60 LGMPGMTAYVGFYEVCSAK-HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL 138 (269)
Q Consensus 60 l~~~~~~a~~~l~~~~~~~-~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~ 138 (269)
+||+.......| +..++. .|.+|+|.|.+.-+|.-.+.++...|++|++.-... . ++
T Consensus 137 ~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t--------------------~-~l 194 (285)
T PRK14191 137 VPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT--------------------K-DL 194 (285)
T ss_pred CCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc--------------------H-HH
Confidence 455555555445 444543 699999999988999999999999999988763211 1 33
Q ss_pred HHHHHHHCCCCccEEEeCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337 139 NAALKRYFPEGIDVYFENVGGKTLDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 139 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 181 (269)
.+.+++ .|+++-++|...+-. -+.++++..++.+|..
T Consensus 195 ~~~~~~-----ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 195 SFYTQN-----ADIVCVGVGKPDLIK-ASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHHh-----CCEEEEecCCCCcCC-HHHcCCCcEEEEeecc
Confidence 333333 799999999744422 4567899999998873
No 478
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=96.23 E-value=0.022 Score=41.78 Aligned_cols=96 Identities=24% Similarity=0.333 Sum_probs=65.6
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCc--eeEecCChhhHHHHHHHHCCCCc
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFD--EAFNYKEEADLNAALKRYFPEGI 150 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~--~~~~~~~~~~~~~~i~~~~~~~~ 150 (269)
+++.+||=.|+ |.|..+..+++.. +.++++++.+++..+.+++ +++.. ..+.. ++.+ +.+...+.|
T Consensus 2 ~~~~~iLDlGc--G~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~----d~~~-l~~~~~~~~ 74 (152)
T PF13847_consen 2 KSNKKILDLGC--GTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQG----DIED-LPQELEEKF 74 (152)
T ss_dssp TTTSEEEEET---TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEES----BTTC-GCGCSSTTE
T ss_pred CCCCEEEEecC--cCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhcccccccccccceEEe----ehhc-cccccCCCe
Confidence 46788998885 7788888888644 6799999999998888874 35554 22222 2222 211111479
Q ss_pred cEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337 151 DVYFENVGG-------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 151 d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
|+|+....- ..++.+.+.++++|.++....
T Consensus 75 D~I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~ 111 (152)
T PF13847_consen 75 DIIISNGVLHHFPDPEKVLKNIIRLLKPGGILIISDP 111 (152)
T ss_dssp EEEEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEEC
Confidence 999986431 457888999999999887644
No 479
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.23 E-value=0.029 Score=41.09 Aligned_cols=91 Identities=18% Similarity=0.143 Sum_probs=56.7
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcee-------EecCChhhHHHHHHHHCCCCccEEEe
Q 024337 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEA-------FNYKEEADLNAALKRYFPEGIDVYFE 155 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~-------~~~~~~~~~~~~i~~~~~~~~d~vid 155 (269)
|+|+|+ |++|...+..++..|.+|..+++++ +.+.++ +.|.... +......... ....+.+|++|-
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~viv 73 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIK-EQGLTITGPDGDETVQPPIVISAP----SADAGPYDLVIV 73 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHH-HHCEEEEETTEEEEEEEEEEESSH----GHHHSTESEEEE
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhh-heeEEEEecccceecccccccCcc----hhccCCCcEEEE
Confidence 689998 9999999999988999999999887 777766 5554211 1100000001 001137999999
Q ss_pred CCCchhHhhhHh----hhhcCCEEEEEec
Q 024337 156 NVGGKTLDAVLP----NMKIRGRIAACGM 180 (269)
Q Consensus 156 ~~g~~~~~~~~~----~l~~~G~~v~~g~ 180 (269)
|+-......+++ .+.++..++.+.+
T Consensus 74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~qN 102 (151)
T PF02558_consen 74 AVKAYQLEQALQSLKPYLDPNTTIVSLQN 102 (151)
T ss_dssp -SSGGGHHHHHHHHCTGEETTEEEEEESS
T ss_pred EecccchHHHHHHHhhccCCCcEEEEEeC
Confidence 998644444444 4445556666643
No 480
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=96.22 E-value=0.092 Score=45.66 Aligned_cols=100 Identities=15% Similarity=0.168 Sum_probs=65.0
Q ss_pred hhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HcCCce--eEecCChhhHHHHHHHHC
Q 024337 74 VCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKN---KFGFDE--AFNYKEEADLNAALKRYF 146 (269)
Q Consensus 74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~---~~g~~~--~~~~~~~~~~~~~i~~~~ 146 (269)
...++++++||=.|+ |.|..+..++..+ +.+|++++.++++.+.+++ .+|... ++..+.. .+ ....
T Consensus 232 ~l~~~~g~~VLD~ca--gpGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~-~l----~~~~ 304 (431)
T PRK14903 232 LMELEPGLRVLDTCA--APGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAE-RL----TEYV 304 (431)
T ss_pred HhCCCCCCEEEEeCC--CccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchh-hh----hhhh
Confidence 456789999998886 4466666777766 4599999999999887764 345542 2222211 12 1112
Q ss_pred CCCccEEEe---CCCch--------------------------hHhhhHhhhhcCCEEEEEec
Q 024337 147 PEGIDVYFE---NVGGK--------------------------TLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 147 ~~~~d~vid---~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~ 180 (269)
.+.||.|+- |+|.. .+..+++.++++|+++....
T Consensus 305 ~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 367 (431)
T PRK14903 305 QDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYSTC 367 (431)
T ss_pred hccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 347998874 44421 15678889999999876644
No 481
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=96.22 E-value=0.009 Score=47.59 Aligned_cols=66 Identities=17% Similarity=0.127 Sum_probs=47.0
Q ss_pred EEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCCc
Q 024337 83 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVGG 159 (269)
Q Consensus 83 vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 159 (269)
|+|.||||-+|...+..++..|-+|++++|++.+.+... ... +.+ .+.+.+....++|+||+-+|.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~---~~~-v~~-------~~~~~~~~~~~~DavINLAG~ 66 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL---HPN-VTL-------WEGLADALTLGIDAVINLAGE 66 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc---Ccc-ccc-------cchhhhcccCCCCEEEECCCC
Confidence 689999999999999999999999999999877665432 211 111 111222211269999999996
No 482
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.21 E-value=0.043 Score=45.97 Aligned_cols=87 Identities=23% Similarity=0.256 Sum_probs=60.5
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.|++|.|+|. |.+|...++.++.+|++|++.+++.... ... ..+.. .. ++.+.+.+ .|+|+-+++
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~----~~---~l~ell~~-----aDiV~l~lP 213 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAE----YR---PLEELLRE-----SDFVSLHVP 213 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCE----ec---CHHHHHhh-----CCEEEEeCC
Confidence 5789999998 9999999999999999999999775432 222 44432 11 33333433 688888887
Q ss_pred c-h----hH-hhhHhhhhcCCEEEEEec
Q 024337 159 G-K----TL-DAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 159 ~-~----~~-~~~~~~l~~~G~~v~~g~ 180 (269)
. . .+ ...+..|+++..++.++.
T Consensus 214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 214 LTKETYHMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred CChHHhhccCHHHHhcCCCCeEEEECcC
Confidence 3 1 12 356777888888877755
No 483
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.20 E-value=0.055 Score=44.26 Aligned_cols=92 Identities=15% Similarity=0.178 Sum_probs=64.0
Q ss_pred cCCcchhHHHHHHHhhcC-CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHcCCceeEecCChhh
Q 024337 60 LGMPGMTAYVGFYEVCSA-KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKVDLLKNKFGFDEAFNYKEEAD 137 (269)
Q Consensus 60 l~~~~~~a~~~l~~~~~~-~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~-~s~~~~~~~~~~~g~~~~~~~~~~~~ 137 (269)
+||+....+..| +..++ -.|++|+|+|.++.+|.-.+.++...|++|++.. ++.+
T Consensus 138 ~PcTp~ai~~ll-~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~---------------------- 194 (296)
T PRK14188 138 VPCTPLGCMMLL-RRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD---------------------- 194 (296)
T ss_pred cCCCHHHHHHHH-HHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC----------------------
Confidence 455555555545 33343 4799999999889999999999999999999884 4321
Q ss_pred HHHHHHHHCCCCccEEEeCCCc-hhHhhhHhhhhcCCEEEEEecc
Q 024337 138 LNAALKRYFPEGIDVYFENVGG-KTLDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 138 ~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~ 181 (269)
+.+.++ ..|+++-|+|. ..+...+ ++++..++.+|..
T Consensus 195 l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin 232 (296)
T PRK14188 195 LPAVCR-----RADILVAAVGRPEMVKGDW--IKPGATVIDVGIN 232 (296)
T ss_pred HHHHHh-----cCCEEEEecCChhhcchhe--ecCCCEEEEcCCc
Confidence 111121 27899999997 4444333 8888899998874
No 484
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.18 E-value=0.014 Score=48.46 Aligned_cols=71 Identities=17% Similarity=0.193 Sum_probs=48.9
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCce-eEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDE-AFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
+|+|.|++|.+|..+++.+...|.+|+++++++++...+. ..+... ..|..+. + .+.+... ++|++|++++
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~-~---~l~~~~~-~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDP-A---SLRKAVA-GCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCH-H---HHHHHHh-CCCEEEEece
Confidence 6899999999999999999999999999998766543333 334332 2344432 2 2222222 4899999885
No 485
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=96.18 E-value=0.049 Score=41.32 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=59.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HcCCceeEecCChhhHHHHHHHHCCCCccEEE
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKVDLLKN---KFGFDEAFNYKEEADLNAALKRYFPEGIDVYF 154 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~-G~~V~~~~~s~~~~~~~~~---~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vi 154 (269)
++++|+-.|+ |.|..++.+++.. +.+|++++.+++..+.+++ +.+.+. +..... +..+ +. ..+.||+|+
T Consensus 42 ~~~~vLDiGc--GtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~-i~~i~~-d~~~-~~--~~~~fD~I~ 114 (181)
T TIGR00138 42 DGKKVIDIGS--GAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNN-VEIVNG-RAED-FQ--HEEQFDVIT 114 (181)
T ss_pred CCCeEEEecC--CCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCC-eEEEec-chhh-cc--ccCCccEEE
Confidence 4789999986 5567777777655 4699999999887665542 344432 111111 2221 11 124799888
Q ss_pred eCCC-c--hhHhhhHhhhhcCCEEEEE
Q 024337 155 ENVG-G--KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 155 d~~g-~--~~~~~~~~~l~~~G~~v~~ 178 (269)
...- . ..++.+.+.|+++|+++..
T Consensus 115 s~~~~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 115 SRALASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred ehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence 6542 1 4566778899999999875
No 486
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=96.18 E-value=0.054 Score=41.04 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=44.7
Q ss_pred EEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCH-------HHHHHHHHHcCCce---eEecCChhhHHHHHHHHCC--C
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK-------DKVDLLKNKFGFDE---AFNYKEEADLNAALKRYFP--E 148 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~-------~~~~~~~~~~g~~~---~~~~~~~~~~~~~i~~~~~--~ 148 (269)
+++|+|+.|++|+..++.+...+. +++.+.++. +..+.++ +.|..- ..|..+.+++.+.+.+... +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 689999999999999999988877 999999882 1334455 555532 2344443233333333322 2
Q ss_pred CccEEEeCCCc
Q 024337 149 GIDVYFENVGG 159 (269)
Q Consensus 149 ~~d~vid~~g~ 159 (269)
+++-||.+.|.
T Consensus 81 ~i~gVih~ag~ 91 (181)
T PF08659_consen 81 PIDGVIHAAGV 91 (181)
T ss_dssp -EEEEEE----
T ss_pred Ccceeeeeeee
Confidence 67888887774
No 487
>PLN02214 cinnamoyl-CoA reductase
Probab=96.16 E-value=0.043 Score=46.17 Aligned_cols=39 Identities=21% Similarity=0.314 Sum_probs=34.6
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 116 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~ 116 (269)
.++.+|+|+||+|.+|..+++.+...|.+|++++++.++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 357789999999999999999999999999999987654
No 488
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=96.15 E-value=0.038 Score=43.63 Aligned_cols=100 Identities=14% Similarity=0.166 Sum_probs=66.4
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHc---CCce--eEecCChhhHHHHHHHH
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKVDLLKNKF---GFDE--AFNYKEEADLNAALKRY 145 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G--~~V~~~~~s~~~~~~~~~~~---g~~~--~~~~~~~~~~~~~i~~~ 145 (269)
....++++++||-.|+ |.|..+..+++..+ .+|++++.+++..+.+++.+ +.+. .+..+ ..+ + ..
T Consensus 39 ~~l~~~~~~~vLDiGc--G~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d----~~~-~-~~ 110 (231)
T TIGR02752 39 KRMNVQAGTSALDVCC--GTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGN----AME-L-PF 110 (231)
T ss_pred HhcCCCCCCEEEEeCC--CcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEec----hhc-C-CC
Confidence 3456778999999996 66778888888764 59999999999887776443 2221 22111 111 1 11
Q ss_pred CCCCccEEEeCCCc-------hhHhhhHhhhhcCCEEEEEec
Q 024337 146 FPEGIDVYFENVGG-------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 146 ~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
..+.||+|+-+..- ..+..+.+.|+++|+++....
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 111 DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred CCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 22479999764331 356778899999999987644
No 489
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=96.14 E-value=0.042 Score=46.38 Aligned_cols=50 Identities=20% Similarity=0.159 Sum_probs=39.7
Q ss_pred hhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHH
Q 024337 65 MTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115 (269)
Q Consensus 65 ~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~ 115 (269)
+|||.-|..... .++++|+|+||+|=+|..++..+...|.+|+++++...
T Consensus 1 ~~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~ 50 (348)
T PRK15181 1 MTAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFST 50 (348)
T ss_pred Cchhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 367777644333 34578999999999999999999999999999987543
No 490
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.13 E-value=0.099 Score=42.63 Aligned_cols=78 Identities=15% Similarity=0.159 Sum_probs=55.3
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCC
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENV 157 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 157 (269)
-.|++++|.|+++-+|..++.++...|++|++..+.. + ++.+.++ .+|++++++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---~------------------~L~~~~~-----~aDIvI~At 210 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---Q------------------NLPELVK-----QADIIVGAV 210 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---h------------------hHHHHhc-----cCCEEEEcc
Confidence 4788999999944599999999999999877766421 1 2222221 489999999
Q ss_pred CchhHhhhHhhhhcCCEEEEEeccc
Q 024337 158 GGKTLDAVLPNMKIRGRIAACGMIS 182 (269)
Q Consensus 158 g~~~~~~~~~~l~~~G~~v~~g~~~ 182 (269)
|...+ .-.+.++++..++.++...
T Consensus 211 G~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 211 GKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred CCCCc-CCHHHcCCCCEEEEEEEee
Confidence 86332 2235688888888887643
No 491
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=96.12 E-value=0.08 Score=46.02 Aligned_cols=102 Identities=17% Similarity=0.149 Sum_probs=63.8
Q ss_pred HhhcCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHH---cCCce-e--EecCChhhHHHHHHHH
Q 024337 73 EVCSAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNK---FGFDE-A--FNYKEEADLNAALKRY 145 (269)
Q Consensus 73 ~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~i~~~ 145 (269)
.....+++++||=.|+ |.|..+..+++..+ .+|++++.++++.+.++++ +|... + .+.+.. .... . .
T Consensus 232 ~~L~~~~g~~VLDlca--g~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~-~~~~-~--~ 305 (426)
T TIGR00563 232 TWLAPQNEETILDACA--APGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGR-GPSQ-W--A 305 (426)
T ss_pred HHhCCCCCCeEEEeCC--CccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccc-cccc-c--c
Confidence 3456788999998886 44555556666554 6999999999988776543 45541 2 221111 1100 0 0
Q ss_pred CCCCccEEEe---CCCc--------------------------hhHhhhHhhhhcCCEEEEEec
Q 024337 146 FPEGIDVYFE---NVGG--------------------------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 146 ~~~~~d~vid---~~g~--------------------------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
..+.||.|+- |+|. ..+..+++.|++||+++....
T Consensus 306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvystc 369 (426)
T TIGR00563 306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYATC 369 (426)
T ss_pred cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 1236998874 5542 135678889999999997643
No 492
>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]
Probab=96.11 E-value=0.19 Score=37.09 Aligned_cols=119 Identities=16% Similarity=0.045 Sum_probs=85.1
Q ss_pred hhcCCcchhHHHHHHHhhcCCCCCEEEEecCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCceeEecCCh
Q 024337 58 GILGMPGMTAYVGFYEVCSAKHGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE 135 (269)
Q Consensus 58 a~l~~~~~~a~~~l~~~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~--G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~ 135 (269)
|.+|....+|-.+. ..-..+.|-.|+=+|. |+|-.+-.++++. ...++++..+.+-...+.+.+....++|.+..
T Consensus 28 aI~PsSs~lA~~M~-s~I~pesglpVlElGP--GTGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~gda~ 104 (194)
T COG3963 28 AILPSSSILARKMA-SVIDPESGLPVLELGP--GTGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIINGDAF 104 (194)
T ss_pred eecCCcHHHHHHHH-hccCcccCCeeEEEcC--CccHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccccchh
Confidence 45565556666555 3345678889999996 5677777777654 33888888888877777756666668887765
Q ss_pred hhHHHHHHHHCCCCccEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337 136 ADLNAALKRYFPEGIDVYFENVGG---------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 136 ~~~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
++...+.+..+..||.||.++.- ..++..+..++.+|.++.+..
T Consensus 105 -~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftY 157 (194)
T COG3963 105 -DLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTY 157 (194)
T ss_pred -hHHHHHhhcCCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 55555666554589999999974 246777888899999998865
No 493
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.11 E-value=0.018 Score=46.19 Aligned_cols=73 Identities=10% Similarity=0.104 Sum_probs=50.5
Q ss_pred EEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCC-CCccEEEeCCCc
Q 024337 82 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFP-EGIDVYFENVGG 159 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-~~~d~vid~~g~ 159 (269)
+|+|+||||= |...+..+...|.+|+++.+++...+.+. ..|...+.-..- +-. .+.+... .++|+|+|++..
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l--~~~-~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGAL--DPQ-ELREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCC--CHH-HHHHHHHhcCCCEEEEcCCH
Confidence 6999999775 99999888888999999999988777776 555444332221 111 1333332 379999998864
No 494
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.11 E-value=0.085 Score=37.28 Aligned_cols=91 Identities=22% Similarity=0.173 Sum_probs=50.6
Q ss_pred EEEEecCcchHHHHHHHHHHH-cCCEEEEEeCCHH----HHHHHHHHcCCc--eeEecCChhhHHHHHHHHCCCCccEEE
Q 024337 82 CVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKD----KVDLLKNKFGFD--EAFNYKEEADLNAALKRYFPEGIDVYF 154 (269)
Q Consensus 82 ~vlI~ga~g~vG~~~i~~a~~-~G~~V~~~~~s~~----~~~~~~~~~g~~--~~~~~~~~~~~~~~i~~~~~~~~d~vi 154 (269)
+|+|+|++|-+|.++++.+.. .+.++.....+.. ..+.-. -.|.. .+.-++ ++.+.+. .+|++|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~-~~~~~~~~~~v~~---~l~~~~~-----~~DVvI 72 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGE-LAGIGPLGVPVTD---DLEELLE-----EADVVI 72 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHH-HCTSST-SSBEBS----HHHHTT-----H-SEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhh-hhCcCCcccccch---hHHHhcc-----cCCEEE
Confidence 689999999999999999988 5777666553333 001111 11211 111111 3333332 289999
Q ss_pred eCCCchhHhhhHhhhhcCCEEEEEecc
Q 024337 155 ENVGGKTLDAVLPNMKIRGRIAACGMI 181 (269)
Q Consensus 155 d~~g~~~~~~~~~~l~~~G~~v~~g~~ 181 (269)
|++-.+.....++.....|.-+.+|.+
T Consensus 73 DfT~p~~~~~~~~~~~~~g~~~ViGTT 99 (124)
T PF01113_consen 73 DFTNPDAVYDNLEYALKHGVPLVIGTT 99 (124)
T ss_dssp EES-HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred EcCChHHhHHHHHHHHhCCCCEEEECC
Confidence 999666555555555555666666664
No 495
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.11 E-value=0.077 Score=41.03 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=29.9
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS 113 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s 113 (269)
.+.+|+|.|+ |++|..+++.+...|. +++.++.+
T Consensus 20 ~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 4678999998 9999999999999998 88888865
No 496
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=96.09 E-value=0.073 Score=43.19 Aligned_cols=98 Identities=12% Similarity=0.075 Sum_probs=60.5
Q ss_pred CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCC------ceeEecCChhhHHHHHHHHCCCCc
Q 024337 78 KHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKNKFGF------DEAFNYKEEADLNAALKRYFPEGI 150 (269)
Q Consensus 78 ~~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~~~g~------~~~~~~~~~~~~~~~i~~~~~~~~ 150 (269)
...++||+.|+ |.|..+..+++.... ++.+++.+++-.+.+++.+.. +..++.... +..+.+++ .++.|
T Consensus 71 ~~p~~VL~iG~--G~G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~-D~~~~l~~-~~~~y 146 (270)
T TIGR00417 71 PNPKHVLVIGG--GDGGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQID-DGFKFLAD-TENTF 146 (270)
T ss_pred CCCCEEEEEcC--CchHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEEC-chHHHHHh-CCCCc
Confidence 34569999996 446666677776644 899999888877777743321 011111111 33344433 23489
Q ss_pred cEEEeCCC-----------chhHhhhHhhhhcCCEEEEEe
Q 024337 151 DVYFENVG-----------GKTLDAVLPNMKIRGRIAACG 179 (269)
Q Consensus 151 d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g 179 (269)
|+|+--.. .+.++.+.+.|+++|.++...
T Consensus 147 DvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 147 DVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred cEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 98764322 133568889999999998763
No 497
>PRK04266 fibrillarin; Provisional
Probab=96.09 E-value=0.066 Score=42.16 Aligned_cols=100 Identities=16% Similarity=0.096 Sum_probs=62.0
Q ss_pred hhcCCCCCEEEEecCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHcC---CceeEecCChhhHHHHHHHHCCCC
Q 024337 74 VCSAKHGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEADLNAALKRYFPEG 149 (269)
Q Consensus 74 ~~~~~~~~~vlI~ga~g~vG~~~i~~a~~~G-~~V~~~~~s~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~~~ 149 (269)
...++++++|+=.|+ |.|..+..+++..+ .+|++++.+++..+.+.+... .-..+..+.. +. ..... ..+.
T Consensus 67 ~l~i~~g~~VlD~G~--G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~-~~-~~~~~-l~~~ 141 (226)
T PRK04266 67 NFPIKKGSKVLYLGA--ASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADAR-KP-ERYAH-VVEK 141 (226)
T ss_pred hCCCCCCCEEEEEcc--CCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCC-Cc-chhhh-cccc
Confidence 367889999999986 44566667777664 499999999987765432211 1122222211 10 00011 1135
Q ss_pred ccEEEeCCCc-----hhHhhhHhhhhcCCEEEEE
Q 024337 150 IDVYFENVGG-----KTLDAVLPNMKIRGRIAAC 178 (269)
Q Consensus 150 ~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~ 178 (269)
||+++..... ..+..+.+.|+++|+++..
T Consensus 142 ~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 142 VDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred CCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 9999854432 1367888999999999984
No 498
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.08 E-value=0.032 Score=48.99 Aligned_cols=171 Identities=13% Similarity=0.122 Sum_probs=90.8
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----HcCCce----eEecCChhhHHHHHHHHCCC-
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKVDLLKN----KFGFDE----AFNYKEEADLNAALKRYFPE- 148 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~-~V~~~~~s~~~~~~~~~----~~g~~~----~~~~~~~~~~~~~i~~~~~~- 148 (269)
.|++|||+||+|++|...+.-....+. +++..++++.+...... .++... +-|..+ .+.+.+...+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD----~~~~~~~~~~~ 324 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRD----RDRVERAMEGH 324 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccccc----HHHHHHHHhcC
Confidence 589999999999999877766666677 88889988876654433 333221 223333 2344444445
Q ss_pred CccEEEeCCCchhH------------------hhhHhh-hhcC-CEEEEEeccccc-cCCCCCCccchHHH----hhc--
Q 024337 149 GIDVYFENVGGKTL------------------DAVLPN-MKIR-GRIAACGMISQY-NLDKPEGVHNLMYL----VSK-- 201 (269)
Q Consensus 149 ~~d~vid~~g~~~~------------------~~~~~~-l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~----~~~-- 201 (269)
++|+||.++.-++. ....+. +..+ -++|.++..-.. +++-......+.+. ...
T Consensus 325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmGaTKr~aE~~~~a~~~~~ 404 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMGATKRLAEKLFQAANRNV 404 (588)
T ss_pred CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHhhHHHHHHHHHHHHHhhcc
Confidence 89999998864221 122222 2222 367776542110 11111111111111 111
Q ss_pred ---ceeeeeeeecccccchHHHHHHHHHHHHCCCeeeeeeh--ccccccHHHHHHHH
Q 024337 202 ---RLRMEGFIVLDHYHLYPKFLEMIIPHIKEGKLVYVEDM--AEGLESAPAALIGL 253 (269)
Q Consensus 202 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~a~~~~ 253 (269)
.-.+...+.+++.......++..-+++++|.--+..+. +--|=.++||.+..
T Consensus 405 ~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LV 461 (588)
T COG1086 405 SGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLV 461 (588)
T ss_pred CCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHH
Confidence 23455555566555555667777788888844332221 11244556665533
No 499
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional
Probab=96.06 E-value=0.048 Score=43.61 Aligned_cols=97 Identities=12% Similarity=0.166 Sum_probs=64.1
Q ss_pred CCCCCEEEEecCcchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHcC---CceeEecCChhhHHHHHHHHCCCCc
Q 024337 77 AKHGECVFISAASGAVGQLVGQFAKL---LGCYVVGSAGSKDKVDLLKNKFG---FDEAFNYKEEADLNAALKRYFPEGI 150 (269)
Q Consensus 77 ~~~~~~vlI~ga~g~vG~~~i~~a~~---~G~~V~~~~~s~~~~~~~~~~~g---~~~~~~~~~~~~~~~~i~~~~~~~~ 150 (269)
+.++.+||-+|+ |.|..+..+++. -++++++++.|++..+.+++.+. ...-++.... ++ .+...+.+
T Consensus 54 ~~~~~~vLDlGc--GtG~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~-d~----~~~~~~~~ 126 (247)
T PRK15451 54 VQPGTQVYDLGC--SLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-DI----RDIAIENA 126 (247)
T ss_pred CCCCCEEEEEcc--cCCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeC-Ch----hhCCCCCC
Confidence 568899999997 457777777764 36799999999998888875442 2211222221 22 11222357
Q ss_pred cEEEeCCCc---------hhHhhhHhhhhcCCEEEEEec
Q 024337 151 DVYFENVGG---------KTLDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 151 d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 180 (269)
|+++.+..- ..++.+.+.|+++|.++....
T Consensus 127 D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e~ 165 (247)
T PRK15451 127 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 165 (247)
T ss_pred CEEehhhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 887754321 357889999999999998764
No 500
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.06 E-value=0.027 Score=46.70 Aligned_cols=87 Identities=17% Similarity=0.123 Sum_probs=60.2
Q ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCceeEecCChhhHHHHHHHHCCCCccEEEeCCC
Q 024337 79 HGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDVYFENVG 158 (269)
Q Consensus 79 ~~~~vlI~ga~g~vG~~~i~~a~~~G~~V~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 158 (269)
.+.+|.|+|- |.+|..+++.++.+|++|++.+++.++.. +..... ... ++.+.+. ..|+|+.+.+
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~--~~~-~l~e~l~-----~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA--GRE-ELSAFLS-----QTRVLINLLP 199 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec--ccc-cHHHHHh-----cCCEEEECCC
Confidence 5789999998 99999999999999999999987643221 111111 111 3444443 3799998887
Q ss_pred c--h---h-HhhhHhhhhcCCEEEEEec
Q 024337 159 G--K---T-LDAVLPNMKIRGRIAACGM 180 (269)
Q Consensus 159 ~--~---~-~~~~~~~l~~~G~~v~~g~ 180 (269)
. . . -...+..|+++..+|.++.
T Consensus 200 lt~~T~~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 200 NTPETVGIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred CCHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence 4 2 1 2356778888888888765
Done!